Euteleostomi ANCESTRAL SPECIES 214 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165 Sarcopterygii ANCESTRAL SPECIES 47 ENSGT00510000046929.b ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a Tetrapoda ANCESTRAL SPECIES 29 ENSGT00510000046929.b ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00390000014165.d ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b Amniota ANCESTRAL SPECIES 17 ENSGT00510000046929.b ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b Mammalia ANCESTRAL SPECIES 32 ENSGT00510000046929.b ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 Theria ANCESTRAL SPECIES 18 ENSGT00510000046929.b ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 Eutheria ANCESTRAL SPECIES 6 ENSGT00910000144291 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b Boreoeutheria ANCESTRAL SPECIES 9 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00900000143489 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 Euarchontoglires ANCESTRAL SPECIES 8 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00900000143489 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 Euarchontoglires_A ANCESTRAL SPECIES 8 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b Glires ANCESTRAL SPECIES 7 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b Rodentia ANCESTRAL SPECIES 7 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b Rodentia_B ANCESTRAL SPECIES 4 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00940000167072 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.b.b.b.q ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b.d Myomorpha ANCESTRAL SPECIES 28 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.b.b.b.q ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b.d Muroidea ANCESTRAL SPECIES 10 ENSGT00950000183213.a.a.b #32 ENSGT00940000162598 ENSGT00940000154590 #31 ENSGT00940000158623 ENSGT00390000015916 ENSGT00390000009825 ENSGT00940000156278 ENSGT00390000002628 ENSGT00550000075071 ENSGT00510000049125 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.b.b.b.q ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b.d Muroidea_A ANCESTRAL SPECIES 1 ENSGT00530000063694.a #33 ENSGT00950000183213.a.a.b #32 ENSGT00940000162598 ENSGT00940000154590 #31 ENSGT00940000158623 ENSGT00390000015916 ENSGT00390000009825 ENSGT00940000156278 ENSGT00390000002628 ENSGT00510000049125 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b.d ENSGT00940000160629 Murinae ANCESTRAL SPECIES 7 ENSGT00530000063694.a #33 ENSGT00950000183213.a.a.b #32 ENSGT00940000162598 ENSGT00940000154590 #31 ENSGT00940000158623 ENSGT00390000015916 ENSGT00390000009825 ENSGT00940000156278 ENSGT00390000002628 ENSGT00510000049125 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b.d.b.b ENSGT00940000160629 Mus ANCESTRAL SPECIES 21 ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735 ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00950000183213.a.a.b #32 ENSGT00530000063694.a #33 ENSGT00940000160198 #34 ENSGT00390000006233.c.a.a #36 ENSGT00940000161859 #35 ENSGT00940000156947 #37 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000160286 Mus_A ANCESTRAL SPECIES 10 ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735.k ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00950000183213.a.a.b #32 ENSGT00530000063694.a #33 ENSGT00940000160198 #34 ENSGT00390000006233.c.a.a #36 ENSGT00940000161859 #35 ENSGT00940000156947 #37 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000160286 Mus_B ANCESTRAL SPECIES 9 ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735.k ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00950000183213.a.a.b #32 ENSGT00530000063694.a #33 ENSGT00940000160198 #34 ENSGT00390000006233.c.a.a #36 ENSGT00940000161859 #35 ENSGT00940000156947 #37 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000160286 Mus_C ANCESTRAL SPECIES 9 ENSGT00940000157882 ENSGT00410000025882.b ENSGT00730000111329 ENSGT01030000234648.a.b.a.a.a ENSGT00940000160955 ENSGT00940000160887 ENSGT00510000048041 ENSGT00940000157078 ENSGT00390000006663 ENSGT01090000260100.A ENSGT00940000162408 ENSGT00940000158438 ENSGT00390000017030.b.b ENSGT00950000183180.a.b ENSGT00940000161735.k ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00950000183213.a.a.b #32 ENSGT00530000063694.a #33 ENSGT00940000160198 #34 ENSGT00390000006233.c.a.a #36 ENSGT00940000161859 #35 ENSGT00940000156947 #37 ENSGT00390000017359 ENSGT00940000160060 ENSGT00940000160286 Steppe mouse MODERN SPECIES 2698 Nkx2-5 (ENSMSIG00000025708) #22 Bnip1 (ENSMSIG00000025666) #23 Crebrf (ENSMSIG00000025640) #24 ENSMSIG00000025620 #25 Ergic1 (ENSMSIG00000025604) #26 ENSMSIG00000025591 #27 Dusp1 (ENSMSIG00000025579) #28 ENSMSIG00000025563 #29 Neurl1b (ENSMSIG00000025549) #30 ENSMSIG00000024264 #31 Luc7l (ENSMSIG00000024237) #32 Fam234a (ENSMSIG00000024174) #33 Rgs11 (ENSMSIG00000023974) #34 Pdia2 (ENSMSIG00000023925) #35 Arhgdig (ENSMSIG00000023904) #36 Axin1 (ENSMSIG00000023878) #37 spretus MODERN SPECIES 8 MGP_SPRETEiJ_G0022214 MGP_SPRETEiJ_G0022213 Grm4 (MGP_SPRETEiJ_G0022212) Lemd2 (MGP_SPRETEiJ_G0022211) Ip6k3 (MGP_SPRETEiJ_G0022210) Uqcc2 (MGP_SPRETEiJ_G0022209) Itpr3 (MGP_SPRETEiJ_G0022208) Bak1 (MGP_SPRETEiJ_G0022207) Ggnbp1 (MGP_SPRETEiJ_G0022206) Zbtb9 (MGP_SPRETEiJ_G0022205) Syngap1 (MGP_SPRETEiJ_G0022204) Cuta (MGP_SPRETEiJ_G0022203) Phf1 (MGP_SPRETEiJ_G0022202) MGP_SPRETEiJ_G0022201 MGP_SPRETEiJ_G0022200 Nkx2-5 (MGP_SPRETEiJ_G0022199) #22 Bnip1 (MGP_SPRETEiJ_G0022198) #23 Crebrf (MGP_SPRETEiJ_G0022197) #24 MGP_SPRETEiJ_G0022196 #25 Ergic1 (MGP_SPRETEiJ_G0022195) #26 Dusp1 (MGP_SPRETEiJ_G0022194) #28 Neurl1b (MGP_SPRETEiJ_G0022193) #30 MGP_SPRETEiJ_G0022192 #31 MGP_SPRETEiJ_G0022191 #31 Luc7l (MGP_SPRETEiJ_G0022190) #32 Fam234a (MGP_SPRETEiJ_G0022189) #33 Rgs11 (MGP_SPRETEiJ_G0022188) #34 Arhgdig (MGP_SPRETEiJ_G0022187) #36 Pdia2 (MGP_SPRETEiJ_G0022186) #35 Axin1 (MGP_SPRETEiJ_G0022185) #37 Mrpl28 (MGP_SPRETEiJ_G0022184) Mouse MODERN SPECIES 8 Nudt3 (ENSMUSG00000024213) Smim29 (ENSMUSG00000062753) Hmga1 (ENSMUSG00000046711) Grm4 (ENSMUSG00000063239) Lemd2 (ENSMUSG00000044857) Ip6k3 (ENSMUSG00000024210) Uqcc2 (ENSMUSG00000024208) Itpr3 (ENSMUSG00000042644) Bak1 (ENSMUSG00000057789) Ggnbp1 (ENSMUSG00000048731) Zbtb9 (ENSMUSG00000079605) Syngap1 (ENSMUSG00000067629) Cuta (ENSMUSG00000024194) Phf1 (ENSMUSG00000024193) Kifc5b (ENSMUSG00000024301) Nkx2-5 (ENSMUSG00000015579) #22 Bnip1 (ENSMUSG00000024191) #23 Crebrf (ENSMUSG00000048249) #24 Atp6v0e (ENSMUSG00000015575) #25 Ergic1 (ENSMUSG00000001576) #26 Dusp1 (ENSMUSG00000024190) #28 Neurl1b (ENSMUSG00000034413) #30 Luc7l (ENSMUSG00000024188) #32 Fam234a (ENSMUSG00000024187) #33 Rgs11 (ENSMUSG00000024186) #34 Arhgdig (ENSMUSG00000073433) #36 Pdia2 (ENSMUSG00000024184) #35 Axin1 (ENSMUSG00000024182) #37 Mrpl28 (ENSMUSG00000024181) Pgap6 (ENSMUSG00000024180) Nme4 (ENSMUSG00000024177) Ryukyu mouse MODERN SPECIES 8 Smim29 (MGP_CAROLIEiJ_G0021302) MGP_CAROLIEiJ_G0021301 MGP_CAROLIEiJ_G0021300 Grm4 (MGP_CAROLIEiJ_G0021299) Lemd2 (MGP_CAROLIEiJ_G0021298) Ip6k3 (MGP_CAROLIEiJ_G0021297) Uqcc2 (MGP_CAROLIEiJ_G0021296) Itpr3 (MGP_CAROLIEiJ_G0021295) Bak1 (MGP_CAROLIEiJ_G0021294) Ggnbp1 (MGP_CAROLIEiJ_G0021293) Zbtb9 (MGP_CAROLIEiJ_G0021292) Syngap1 (MGP_CAROLIEiJ_G0021291) Cuta (MGP_CAROLIEiJ_G0021290) Phf1 (MGP_CAROLIEiJ_G0021289) MGP_CAROLIEiJ_G0021287 Nkx2-5 (MGP_CAROLIEiJ_G0021286) #22 Bnip1 (MGP_CAROLIEiJ_G0021285) #23 Crebrf (MGP_CAROLIEiJ_G0021284) #24 MGP_CAROLIEiJ_G0021283 #25 Ergic1 (MGP_CAROLIEiJ_G0021282) #26 Dusp1 (MGP_CAROLIEiJ_G0021281) #28 Neurl1b (MGP_CAROLIEiJ_G0021280) #30 Luc7l (MGP_CAROLIEiJ_G0021279) #32 Fam234a (MGP_CAROLIEiJ_G0021278) #33 Rgs11 (MGP_CAROLIEiJ_G0021277) #34 Arhgdig (MGP_CAROLIEiJ_G0021276) #36 Pdia2 (MGP_CAROLIEiJ_G0021275) #35 Axin1 (MGP_CAROLIEiJ_G0021274) #37 Mrpl28 (MGP_CAROLIEiJ_G0021273) Pgap6 (MGP_CAROLIEiJ_G0021272) Nme4 (MGP_CAROLIEiJ_G0021271) Shrew mouse MODERN SPECIES 13 MGP_PahariEiJ_G0023619 MGP_PahariEiJ_G0023618 Grm4 (MGP_PahariEiJ_G0023617) Lemd2 (MGP_PahariEiJ_G0023616) Ip6k3 (MGP_PahariEiJ_G0023615) Uqcc2 (MGP_PahariEiJ_G0023614) Itpr3 (MGP_PahariEiJ_G0023613) Bak1 (MGP_PahariEiJ_G0023612) Ggnbp1 (MGP_PahariEiJ_G0023611) Zbtb9 (MGP_PahariEiJ_G0023610) Syngap1 (MGP_PahariEiJ_G0023609) Cuta (MGP_PahariEiJ_G0023608) Phf1 (MGP_PahariEiJ_G0023607) MGP_PahariEiJ_G0023605 MGP_PahariEiJ_G0023606 Nkx2-5 (MGP_PahariEiJ_G0023604) #22 Bnip1 (MGP_PahariEiJ_G0023603) #23 Crebrf (MGP_PahariEiJ_G0023602) #24 MGP_PahariEiJ_G0023601 #25 Ergic1 (MGP_PahariEiJ_G0023600) #26 Dusp1 (MGP_PahariEiJ_G0023599) #28 Neurl1b (MGP_PahariEiJ_G0023598) #30 Luc7l (MGP_PahariEiJ_G0023597) #32 MGP_PahariEiJ_G0023596 Rgs11 (MGP_PahariEiJ_G0023595) #34 Arhgdig (MGP_PahariEiJ_G0023594) #36 Pdia2 (MGP_PahariEiJ_G0023593) #35 Axin1 (MGP_PahariEiJ_G0023592) #37 Mrpl28 (MGP_PahariEiJ_G0023591) Pgap6 (MGP_PahariEiJ_G0023590) Nme4 (MGP_PahariEiJ_G0023589) Rat MODERN SPECIES 1 Luc7l (ENSRNOG00000020488) #32 Hba-a1 (ENSRNOG00000029886) #31 ENSRNOG00000070249 Hba-a3 (ENSRNOG00000047321) #31 Hbz (ENSRNOG00000020536) Nprl3 (ENSRNOG00000020541) Mpg (ENSRNOG00000020571) Rhbdf1 (ENSRNOG00000020594) Snrnp25 (ENSRNOG00000020626) Il9r (ENSRNOG00000020630) Nsg2 (ENSRNOG00000020644) RGD1311343 (ENSRNOG00000027852) Cpeb4 (ENSRNOG00000033169) Bod1 (ENSRNOG00000020717) Stc2 (ENSRNOG00000020729) Nkx2-5 (ENSRNOG00000020747) #22 Bnip1 (ENSRNOG00000020753) #23 Crebrf (ENSRNOG00000020769) #24 Atp6v0e1 (ENSRNOG00000003269) #25 Ergic1 (ENSRNOG00000003508) #26 ENSRNOG00000069024 #28 Neurl1b (ENSRNOG00000027606) #30 Sh3pxd2b (ENSRNOG00000004063) Ubtd2 (ENSRNOG00000004137) Efcab9 (ENSRNOG00000004142) Stk10 (ENSRNOG00000004217) ENSRNOG00000066039 Fbxw11 (ENSRNOG00000004395) Smim23 (ENSRNOG00000027196) Fgf18 (ENSRNOG00000048389) Npm1 (ENSRNOG00000004616) Cricetidae ANCESTRAL SPECIES ENSGT00530000063694.a #33 ENSGT00950000183213.a.a.b #32 ENSGT00940000162598 ENSGT00940000154590 #31 ENSGT00940000158623 ENSGT00390000015916 ENSGT00390000009825 ENSGT00940000156278 ENSGT00390000002628 ENSGT00510000049125 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b.d.d.b ENSGT00940000160629 Cricetinae ANCESTRAL SPECIES ENSGT00950000183213.a.a.b #32 ENSGT00940000154590 #31 ENSGT00940000162598 ENSGT00940000158623 ENSGT00390000015916 ENSGT00390000009825 ENSGT00940000156278 ENSGT00390000002628 ENSGT00510000049125 ENSGT00940000167072 ENSGT00640000091672 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b.d.d.a.a.a ENSGT00940000160629 Chinese hamster chok1gshd MODERN SPECIES 229 ENSCGRG00001022538 #31 ENSCGRG00001024697 Hba-x (ENSCGRG00001024784) Nprl3 (ENSCGRG00001009894) Mpg (ENSCGRG00001016501) Rhbdf1 (ENSCGRG00001001539) Snrnp25 (ENSCGRG00001020306) Il9r (ENSCGRG00001023103) Nsg2 (ENSCGRG00001010888) ENSCGRG00001013841 4930524B15Rik (ENSCGRG00001017897) ENSCGRG00001019946 Cpeb4 (ENSCGRG00001021805) Bod1 (ENSCGRG00001023221) Stc2 (ENSCGRG00001023337) Nkx2-5 (ENSCGRG00001024735) #22 Bnip1 (ENSCGRG00001000805) #23 Crebrf (ENSCGRG00001007231) #24 Atp6v0e (ENSCGRG00001022946) #25 Ergic1 (ENSCGRG00001024104) #26 Dusp1 (ENSCGRG00001019246) #28 Neurl1b (ENSCGRG00001022855) #30 Sh3pxd2b (ENSCGRG00001010764) Ubtd2 (ENSCGRG00001022026) Efcab9 (ENSCGRG00001001253) Stk10 (ENSCGRG00001013751) Fbxw11 (ENSCGRG00001016029) Smim23 (ENSCGRG00001015541) Fgf18 (ENSCGRG00001017188) ENSCGRG00001001985 Tlx3 (ENSCGRG00001015510) Golden Hamster MODERN SPECIES 861 Stc2 (ENSMAUG00000008254) Nkx2-5 (ENSMAUG00000007694) #22 Bnip1 (ENSMAUG00000016525) #23 Crebrf (ENSMAUG00000016495) #24 Atp6v0e (ENSMAUG00000013929) #25 Ergic1 (ENSMAUG00000019097) #26 Dusp1 (ENSMAUG00000008804) #28 Neurl1b (ENSMAUG00000009175) #30 ENSMAUG00000001948 Ubtd2 (ENSMAUG00000000209) Efcab9 (ENSMAUG00000012647) Cricetidae_B ANCESTRAL SPECIES ENSGT00530000063694.a #33 ENSGT00950000183213.a.a.b #32 ENSGT00940000162598 ENSGT00940000154590 #31 ENSGT00940000158623 ENSGT00390000015916 ENSGT00390000009825 ENSGT00940000156278 ENSGT00390000002628 ENSGT00510000049125 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b.d.d.b.a ENSGT00940000160629 Prairie vole MODERN SPECIES 15 Luc7l (ENSMOCG00000022342) #32 ENSMOCG00000011391 ENSMOCG00000016063 #31 ENSMOCG00000022598 ENSMOCG00000018254 #31 Hba-x (ENSMOCG00000014714) Nprl3 (ENSMOCG00000019243) Mpg (ENSMOCG00000003994) Rhbdf1 (ENSMOCG00000016377) Snrnp25 (ENSMOCG00000014142) Il9r (ENSMOCG00000015710) Nsg2 (ENSMOCG00000013492) Cpeb4 (ENSMOCG00000022941) Bod1 (ENSMOCG00000010082) Stc2 (ENSMOCG00000008034) Nkx2-5 (ENSMOCG00000018760) #22 Bnip1 (ENSMOCG00000003864) #23 ENSMOCG00000004676 #24 Atp6v0e (ENSMOCG00000003266) #25 Ergic1 (ENSMOCG00000014403) #26 Dusp1 (ENSMOCG00000022124) #28 Neurl1b (ENSMOCG00000019556) #30 Northern American deer mouse MODERN SPECIES 21 Luc7l (ENSPEMG00000011291) #32 ENSPEMG00000027669 #31 ENSPEMG00000029677 ENSPEMG00000030709 #31 Hba-x (ENSPEMG00000011750) Nprl3 (ENSPEMG00000018260) Mpg (ENSPEMG00000013129) ENSPEMG00000025652 Snrnp25 (ENSPEMG00000000454) Il9r (ENSPEMG00000015108) Nsg2 (ENSPEMG00000029190) 4930524B15Rik (ENSPEMG00000016302) Cpeb4 (ENSPEMG00000025728) ENSPEMG00000030821 Stc2 (ENSPEMG00000031170) Nkx2-5 (ENSPEMG00000012263) #22 Bnip1 (ENSPEMG00000014579) #23 Crebrf (ENSPEMG00000019136) #24 Atp6v0e (ENSPEMG00000016171) #25 Ergic1 (ENSPEMG00000011371) #26 ENSPEMG00000029256 Dusp1 (ENSPEMG00000008974) #28 Neurl1b (ENSPEMG00000018647) #30 Sh3pxd2b (ENSPEMG00000011209) Ubtd2 (ENSPEMG00000028774) Efcab9 (ENSPEMG00000012516) Stk10 (ENSPEMG00000016749) Fbxw11 (ENSPEMG00000014614) Smim23 (ENSPEMG00000009648) ENSPEMG00000005862 Fgf18 (ENSPEMG00000027707) Upper Galilee mountains blind mole rat MODERN SPECIES 1546 ENSNGAG00000015715 ENSNGAG00000014020 #31 Hba-x (ENSNGAG00000013746) Nprl3 (ENSNGAG00000003135) Mpg (ENSNGAG00000020949) Rhbdf1 (ENSNGAG00000017730) Snrnp25 (ENSNGAG00000016910) Polr3k (ENSNGAG00000016438) Il9r (ENSNGAG00000020208) Nsg2 (ENSNGAG00000013688) 4930524B15Rik (ENSNGAG00000012324) Cpeb4 (ENSNGAG00000010735) Bod1 (ENSNGAG00000006127) ENSNGAG00000003484 Stc2 (ENSNGAG00000016574) Nkx2-5 (ENSNGAG00000016164) #22 Bnip1 (ENSNGAG00000019475) #23 ENSNGAG00000009349 #24 ENSNGAG00000003294 #25 ENSNGAG00000002828 Ergic1 (ENSNGAG00000020608) #26 Dusp1 (ENSNGAG00000019520) #28 Neurl1b (ENSNGAG00000018472) #30 Sh3pxd2b (ENSNGAG00000000827) Ubtd2 (ENSNGAG00000000104) Efcab9 (ENSNGAG00000019506) Stk10 (ENSNGAG00000019942) Fbxw11 (ENSNGAG00000006880) Smim23 (ENSNGAG00000001372) Fgf18 (ENSNGAG00000001054) ENSNGAG00000016679 Lesser Egyptian jerboa MODERN SPECIES 116 Tlx3 (ENSJJAG00000010676) ENSJJAG00000014455 Fgf18 (ENSJJAG00000016780) Smim23 (ENSJJAG00000017456) ENSJJAG00000021804 Stk10 (ENSJJAG00000023041) Efcab9 (ENSJJAG00000009458) Ubtd2 (ENSJJAG00000010668) Sh3pxd2b (ENSJJAG00000013982) Neurl1b (ENSJJAG00000016269) #30 Msx2 (ENSJJAG00000016806) Nsg2 (ENSJJAG00000020822) Cpeb4 (ENSJJAG00000021518) Bod1 (ENSJJAG00000007832) Stc2 (ENSJJAG00000012335) Nkx2-5 (ENSJJAG00000015156) #22 ENSJJAG00000016444 #23 ENSJJAG00000016719 #24 ENSJJAG00000017400 #24 ENSJJAG00000017961 #25 Ergic1 (ENSJJAG00000006842) #26 Dusp1 (ENSJJAG00000010442) #28 Drd1 (ENSJJAG00000014282) ENSJJAG00000011748 Hrh2 (ENSJJAG00000021498) Cplx2 (ENSJJAG00000010083) Thoc3 (ENSJJAG00000010704) ENSJJAG00000013691 4833439L19Rik (ENSJJAG00000012444) ENSJJAG00000010486 Arl10 (ENSJJAG00000015006) Rodentia_A ANCESTRAL SPECIES 7 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b Hystricomorpha ANCESTRAL SPECIES 30 ENSGT00910000144291 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b.e ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b Naked mole-rat female MODERN SPECIES 23 THOC3 (ENSHGLG00000008773) CPLX2 (ENSHGLG00000033963) HRH2 (ENSHGLG00000018733) SFXN1 (ENSHGLG00000045847) DRD1 (ENSHGLG00000016781) ENSHGLG00000036934 ENSHGLG00000049074 MSX2 (ENSHGLG00000017569) NSG2 (ENSHGLG00000006062) ENSHGLG00000041184 ENSHGLG00000049916 C5orf47 (ENSHGLG00000040572) CPEB4 (ENSHGLG00000008897) ENSHGLG00000041881 STC2 (ENSHGLG00000017592) NKX2-5 (ENSHGLG00000017269) #22 BNIP1 (ENSHGLG00000018031) #23 ENSHGLG00000017817 #24 ENSHGLG00000021190 ENSHGLG00000018219 #25 ENSHGLG00000017100 ERGIC1 (ENSHGLG00000050911) #26 DUSP1 (ENSHGLG00000012633) #28 NEURL1B (ENSHGLG00000039883) #30 SH3PXD2B (ENSHGLG00000009542) UBTD2 (ENSHGLG00000044520) EFCAB9 (ENSHGLG00000006358) STK10 (ENSHGLG00000007426) ENSHGLG00000048340 FBXW11 (ENSHGLG00000010874) ENSHGLG00000032517 Hystricomorpha_a ANCESTRAL SPECIES 28 ENSGT00910000144291 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b.e ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b Hystricomorpha_b ANCESTRAL SPECIES 19 ENSGT00910000144291 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b.e ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b Long-tailed chinchilla MODERN SPECIES 115 ARL10 (ENSCLAG00000015048) KIAA1191 (ENSCLAG00000013315) ENSCLAG00000013733 ENSCLAG00000014990 THOC3 (ENSCLAG00000015924) CPLX2 (ENSCLAG00000013505) HRH2 (ENSCLAG00000015189) SFXN1 (ENSCLAG00000016110) DRD1 (ENSCLAG00000014757) MSX2 (ENSCLAG00000014001) NSG2 (ENSCLAG00000014316) CPEB4 (ENSCLAG00000013156) ENSCLAG00000016125 ENSCLAG00000014408 STC2 (ENSCLAG00000013045) NKX2-5 (ENSCLAG00000013992) #22 BNIP1 (ENSCLAG00000015919) #23 CREBRF (ENSCLAG00000014588) #24 ATP6V0E1 (ENSCLAG00000014664) #25 RPL26L1 (ENSCLAG00000014524) ERGIC1 (ENSCLAG00000014304) #26 DUSP1 (ENSCLAG00000013473) #28 NEURL1B (ENSCLAG00000014210) #30 SH3PXD2B (ENSCLAG00000015389) UBTD2 (ENSCLAG00000015134) EFCAB9 (ENSCLAG00000013040) STK10 (ENSCLAG00000015147) FBXW11 (ENSCLAG00000013691) SMIM23 (ENSCLAG00000012177) FGF18 (ENSCLAG00000013051) ENSCLAG00000014392 Degu MODERN SPECIES 253 MSX2 (ENSODEG00000001847) NSG2 (ENSODEG00000001862) CPEB4 (ENSODEG00000001934) ENSODEG00000001973 ENSODEG00000002042 ENSODEG00000018739 STC2 (ENSODEG00000002102) NKX2-5 (ENSODEG00000002184) #22 BNIP1 (ENSODEG00000002196) #23 CREBRF (ENSODEG00000002364) #24 ATP6V0E1 (ENSODEG00000001083) #25 ERGIC1 (ENSODEG00000001101) #26 DUSP1 (ENSODEG00000001126) #28 NEURL1B (ENSODEG00000001134) #30 ENSODEG00000001166 SH3PXD2B (ENSODEG00000001294) UBTD2 (ENSODEG00000001390) EFCAB9 (ENSODEG00000001416) STK10 (ENSODEG00000001477) FBXW11 (ENSODEG00000001754) SMIM23 (ENSODEG00000001818) Guinea pig MODERN SPECIES 17 ENSCPOG00000034924 NOP16 (ENSCPOG00000026072) ARL10 (ENSCPOG00000001642) KIAA1191 (ENSCPOG00000039242) ENSCPOG00000023337 THOC3 (ENSCPOG00000025805) CPLX2 (ENSCPOG00000033149) HRH2 (ENSCPOG00000003473) SFXN1 (ENSCPOG00000010321) DRD1 (ENSCPOG00000039492) MSX2 (ENSCPOG00000038944) NSG2 (ENSCPOG00000037038) CPEB4 (ENSCPOG00000015530) ENSCPOG00000026033 STC2 (ENSCPOG00000034039) NKX2-5 (ENSCPOG00000026347) #22 BNIP1 (ENSCPOG00000006752) #23 CREBRF (ENSCPOG00000014384) #24 ATP6V0E1 (ENSCPOG00000040227) #25 RPL26L1 (ENSCPOG00000012188) ERGIC1 (ENSCPOG00000012183) #26 DUSP1 (ENSCPOG00000013344) #28 NEURL1B (ENSCPOG00000040777) #30 SH3PXD2B (ENSCPOG00000039072) UBTD2 (ENSCPOG00000034425) EFCAB9 (ENSCPOG00000026758) STK10 (ENSCPOG00000006502) FBXW11 (ENSCPOG00000009582) SMIM23 (ENSCPOG00000006672) FGF18 (ENSCPOG00000006088) TLX3 (ENSCPOG00000024190) Sciuridae ANCESTRAL SPECIES 33 ENSGT01090000260018.C.a ENSGT00940000162246 ENSGT00570000079564 ENSGT00390000018500.a ENSGT01100000263521.a.a.b.a.b.b ENSGT00940000161175 ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b.b.a Marmotini ANCESTRAL SPECIES 38 ENSGT01090000260045.C.e.a.b ENSGT00940000162246 ENSGT01090000259995.b.b.b ENSGT00390000018500.a ENSGT01100000263521.a.a.b.a.b.b ENSGT00940000161175 ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b.b.a Marmotini_b ANCESTRAL SPECIES 127 ENSGT01090000259995.a.a.a ENSGT00390000010671 ENSGT00390000018500.a ENSGT01100000263521.a.a.b.a.b.b ENSGT00940000161175 ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b.b.a Squirrel MODERN SPECIES 209 ENSSTOG00000025133 ENSSTOG00000027395 ENSSTOG00000034328 ENSSTOG00000026307 SH3BP5L (ENSSTOG00000022558) ENSSTOG00000027630 ZNF692 (ENSSTOG00000023210) HRH2 (ENSSTOG00000007422) SFXN1 (ENSSTOG00000028251) DRD1 (ENSSTOG00000029229) MSX2 (ENSSTOG00000000399) NSG2 (ENSSTOG00000011148) CPEB4 (ENSSTOG00000020645) ENSSTOG00000030887 STC2 (ENSSTOG00000004413) NKX2-5 (ENSSTOG00000004407) #22 BNIP1 (ENSSTOG00000004393) #23 CREBRF (ENSSTOG00000004368) #24 ATP6V0E1 (ENSSTOG00000025255) #25 RPL26L1 (ENSSTOG00000026876) ERGIC1 (ENSSTOG00000025246) #26 DUSP1 (ENSSTOG00000023698) #28 NEURL1B (ENSSTOG00000025420) #30 SH3PXD2B (ENSSTOG00000028124) UBTD2 (ENSSTOG00000014298) EFCAB9 (ENSSTOG00000020218) STK10 (ENSSTOG00000026208) FBXW11 (ENSSTOG00000023506) SMIM23 (ENSSTOG00000024706) FGF18 (ENSSTOG00000023666) ENSSTOG00000014732 Arctic ground squirrel MODERN SPECIES 242 STC2 (ENSUPAG00010022254) NKX2-5 (ENSUPAG00010022252) #22 BNIP1 (ENSUPAG00010022250) #23 CREBRF (ENSUPAG00010022247) #24 ATP6V0E1 (ENSUPAG00010022244) #25 RPL26L1 (ENSUPAG00010022239) ERGIC1 (ENSUPAG00010022238) #26 NEURL1B (ENSUPAG00010022219) #30 SH3PXD2B (ENSUPAG00010022216) UBTD2 (ENSUPAG00010022213) EFCAB9 (ENSUPAG00010022210) STK10 (ENSUPAG00010022207) ENSUPAG00010022184 SMIM23 (ENSUPAG00010022182) FGF18 (ENSUPAG00010022179) NPM1 (ENSUPAG00010022177) TLX3 (ENSUPAG00010022175) Alpin marmot MODERN SPECIES 31 ENSMMMG00000009757 ENSMMMG00000009765 ENSMMMG00000009785 OR2AJ1 (ENSMMMG00000009826) SH3BP5L (ENSMMMG00000009857) ENSMMMG00000009866 ZNF692 (ENSMMMG00000009869) HRH2 (ENSMMMG00000009886) SFXN1 (ENSMMMG00000009889) DRD1 (ENSMMMG00000009915) MSX2 (ENSMMMG00000009968) NSG2 (ENSMMMG00000009989) CPEB4 (ENSMMMG00000010044) ENSMMMG00000010091 STC2 (ENSMMMG00000010105) NKX2-5 (ENSMMMG00000010122) #22 BNIP1 (ENSMMMG00000010131) #23 CREBRF (ENSMMMG00000010165) #24 RPL26L1 (ENSMMMG00000010196) ERGIC1 (ENSMMMG00000010202) #26 ENSMMMG00000010217 #28 NEURL1B (ENSMMMG00000010222) #30 SH3PXD2B (ENSMMMG00000010235) UBTD2 (ENSMMMG00000010264) ENSMMMG00000010272 STK10 (ENSMMMG00000010286) FBXW11 (ENSMMMG00000010309) SMIM23 (ENSMMMG00000010399) ENSMMMG00000010418 ENSMMMG00000010435 TLX3 (ENSMMMG00000010459) Eurasian red squirrel MODERN SPECIES 15 ENSSVLG00005011447 ENSSVLG00005011500 LYPD8 (ENSSVLG00005011575) SH3BP5L (ENSSVLG00005011666) ZNF672 (ENSSVLG00005011715) ZNF692 (ENSSVLG00005011774) HRH2 (ENSSVLG00005011848) ENSSVLG00005011926 DRD1 (ENSSVLG00005012085) MSX2 (ENSSVLG00005012101) NSG2 (ENSSVLG00005012146) C5orf47 (ENSSVLG00005012218) CPEB4 (ENSSVLG00005012332) ENSSVLG00005012611 STC2 (ENSSVLG00005012797) NKX2-5 (ENSSVLG00005012867) #22 BNIP1 (ENSSVLG00005012932) #23 CREBRF (ENSSVLG00005013005) #24 ATP6V0E1 (ENSSVLG00005013162) #25 RPL26L1 (ENSSVLG00005013228) ERGIC1 (ENSSVLG00005013430) #26 DUSP1 (ENSSVLG00005013587) #28 NEURL1B (ENSSVLG00005013785) #30 SH3PXD2B (ENSSVLG00005013894) UBTD2 (ENSSVLG00005013934) EFCAB9 (ENSSVLG00005013993) STK10 (ENSSVLG00005014068) FBXW11 (ENSSVLG00005014207) FGF18 (ENSSVLG00005014519) ENSSVLG00005014590 TLX3 (ENSSVLG00005014955) Lagomorpha ANCESTRAL SPECIES 32 ENSGT00910000144291 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00940000159553 ENSGT00940000153052.c.b.a.a.b.d ENSGT00940000153052.c.b.a.a.b.c.a Rabbit MODERN SPECIES 14 ENSOCUG00000032806 NOP16 (ENSOCUG00000013171) ENSOCUG00000016961 KIAA1191 (ENSOCUG00000012191) SIMC1 (ENSOCUG00000012178) THOC3 (ENSOCUG00000016387) CPLX2 (ENSOCUG00000025615) HRH2 (ENSOCUG00000011627) SFXN1 (ENSOCUG00000004827) DRD1 (ENSOCUG00000004825) MSX2 (ENSOCUG00000009161) NSG2 (ENSOCUG00000038430) CPEB4 (ENSOCUG00000008971) ENSOCUG00000014283 STC2 (ENSOCUG00000007985) NKX2-5 (ENSOCUG00000000041) #22 BNIP1 (ENSOCUG00000000040) #23 CREBRF (ENSOCUG00000000038) #24 ATP6V0E1 (ENSOCUG00000006174) #25 RPL26L1 (ENSOCUG00000006172) ERGIC1 (ENSOCUG00000029231) #26 DUSP1 (ENSOCUG00000007999) #28 NEURL1B (ENSOCUG00000027790) #30 SH3PXD2B (ENSOCUG00000006784) ENSOCUG00000034187 UBTD2 (ENSOCUG00000005108) EFCAB9 (ENSOCUG00000024250) STK10 (ENSOCUG00000005098) FBXW11 (ENSOCUG00000007739) FGF18 (ENSOCUG00000011124) ENSOCUG00000011117 Pika MODERN SPECIES 4718 ENSOPRG00000000689 #22 BNIP1 (ENSOPRG00000000684) #23 CREBRF (ENSOPRG00000000677) #24 ATP6V0E1 (ENSOPRG00000000673) #25 ERGIC1 (ENSOPRG00000000665) #26 DUSP1 (ENSOPRG00000000658) #28 NEURL1B (ENSOPRG00000019143) #30 Primates ANCESTRAL SPECIES 8 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00900000143489 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 Strepsirrhini ANCESTRAL SPECIES 5 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b Lemuriformes ANCESTRAL SPECIES 70 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.a.a.a Lemuriformes_a ANCESTRAL SPECIES 146 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.a.a.a Coquerels sifaka MODERN SPECIES 428 SPINK13 (ENSPCOG00000018652) NSG2 (ENSPCOG00000019558) CPEB4 (ENSPCOG00000004676) ENSPCOG00000017551 STC2 (ENSPCOG00000016688) NKX2-5 (ENSPCOG00000019525) #22 BNIP1 (ENSPCOG00000018899) #23 CREBRF (ENSPCOG00000024235) #24 ATP6V0E1 (ENSPCOG00000022516) #25 RPL26L1 (ENSPCOG00000016409) ERGIC1 (ENSPCOG00000014528) #26 DUSP1 (ENSPCOG00000025861) #28 NEURL1B (ENSPCOG00000025987) #30 SH3PXD2B (ENSPCOG00000021760) ENSPCOG00000023430 UBTD2 (ENSPCOG00000014867) EFCAB9 (ENSPCOG00000015386) STK10 (ENSPCOG00000019111) FBXW11 (ENSPCOG00000017113) SMIM23 (ENSPCOG00000018006) FGF18 (ENSPCOG00000028662) Greater bamboo lemur MODERN SPECIES 462 STC2 (ENSPSMG00000016298) NKX2-5 (ENSPSMG00000016306) #22 BNIP1 (ENSPSMG00000016333) #23 CREBRF (ENSPSMG00000016349) #24 ENSPSMG00000016373 #25 RPL26L1 (ENSPSMG00000016402) ERGIC1 (ENSPSMG00000016469) #26 Mouse lemur MODERN SPECIES 15 CAND2 (ENSMICG00000041434) ENSMICG00000034607 EFCAB12 (ENSMICG00000008010) MBD4 (ENSMICG00000008022) IFT122 (ENSMICG00000008033) RHO (ENSMICG00000047910) H1-8 (ENSMICG00000030377) PLXND1 (ENSMICG00000008079) ENSMICG00000028823 MSX2 (ENSMICG00000026941) NSG2 (ENSMICG00000035993) C5orf47 (ENSMICG00000047468) CPEB4 (ENSMICG00000029322) ENSMICG00000035035 STC2 (ENSMICG00000032988) NKX2-5 (ENSMICG00000017468) #22 ENSMICG00000009130 ENSMICG00000017726 #23 CREBRF (ENSMICG00000030817) #24 ATP6V0E1 (ENSMICG00000011317) #25 RPL26L1 (ENSMICG00000002762) ERGIC1 (ENSMICG00000011306) #26 DUSP1 (ENSMICG00000031119) #28 NEURL1B (ENSMICG00000037429) #30 MAT2B (ENSMICG00000005155) HMMR (ENSMICG00000005137) ENSMICG00000029214 CCNG1 (ENSMICG00000030112) GABRG2 (ENSMICG00000012558) GABRA1 (ENSMICG00000029169) GABRA6 (ENSMICG00000015140) Bushbaby MODERN SPECIES 118 NOP16 (ENSOGAG00000000824) ARL10 (ENSOGAG00000000826) ENSOGAG00000008281 SIMC1 (ENSOGAG00000008279) THOC3 (ENSOGAG00000003503) ENSOGAG00000026269 CPLX2 (ENSOGAG00000029483) HRH2 (ENSOGAG00000030497) SFXN1 (ENSOGAG00000016576) DRD1 (ENSOGAG00000000909) MSX2 (ENSOGAG00000032139) NSG2 (ENSOGAG00000010238) CPEB4 (ENSOGAG00000004243) ENSOGAG00000001107 STC2 (ENSOGAG00000007539) NKX2-5 (ENSOGAG00000030259) #22 BNIP1 (ENSOGAG00000007537) #23 ENSOGAG00000030210 #24 ATP6V0E1 (ENSOGAG00000017071) #25 ENSOGAG00000032228 ERGIC1 (ENSOGAG00000017066) #26 DUSP1 (ENSOGAG00000017064) #28 NEURL1B (ENSOGAG00000026783) #30 SH3PXD2B (ENSOGAG00000012721) UBTD2 (ENSOGAG00000011997) EFCAB9 (ENSOGAG00000033621) STK10 (ENSOGAG00000011991) FBXW11 (ENSOGAG00000011988) SMIM23 (ENSOGAG00000025446) ENSOGAG00000028434 FGF18 (ENSOGAG00000013617) Haplorrhini ANCESTRAL SPECIES 4 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00900000143489 ENSGT00940000163300 ENSGT00390000014165.c.a.a.h.g ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 Simiiformes ANCESTRAL SPECIES 6 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537.f ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00900000143489 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 Catarrhini ANCESTRAL SPECIES 7 ENSGT00390000000537.f.a ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00910000146891 ENSGT00940000159824.c ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00900000143489 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00910000148172 ENSGT00940000156818 ENSGT00940000155898.c ENSGT00390000017300 Hominoidea ANCESTRAL SPECIES 8 ENSGT00390000000537.f.a ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00910000146891 ENSGT00940000159824.c ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00900000143489 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00910000148172 ENSGT00940000156818 ENSGT00940000155898.c ENSGT00390000017300 Hominidae ANCESTRAL SPECIES 7 ENSGT00390000000537.f.a ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00910000146891 ENSGT00940000159824.c ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000017004.a.b.m.a.b ENSGT00390000014165.c.b ENSGT00900000143489 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000155445.e.a.a ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00910000148172 ENSGT00940000156818 Homo/Pan/Gorilla group ANCESTRAL SPECIES 7 ENSGT00940000160017 ENSGT00390000000537.f.a ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00910000146891 ENSGT00940000159824.c ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000017004.a.b.m.a.b ENSGT00390000014165.c.b ENSGT00900000143489 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000155445.e.a.a ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00910000148172 ENSGT00940000156818 Homo/Pan group ANCESTRAL SPECIES 8 ENSGT00940000160017 ENSGT00390000000537.f.a ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00910000146891 ENSGT00940000159824.c ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000017004.a.b.m.a.b ENSGT00390000014165.c.b ENSGT00900000143489 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000155445.e.a.a ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00910000148172 ENSGT00940000156818 Pan ANCESTRAL SPECIES 10 ENSGT00940000153451.a.a.b ENSGT00390000000360.q.b ENSGT00940000166141 ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00910000146891 ENSGT00940000159824.c ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000017004.a.b.m.a.b ENSGT00390000014165.c.b ENSGT00900000143489 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000155445.e.a.a ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00910000148172 ENSGT00940000156818 Bonobo MODERN SPECIES 18 KIAA1191 (ENSPPAG00000024759) ENSPPAG00000018818 SIMC1 (ENSPPAG00000042073) THOC3 (ENSPPAG00000006020) CPLX2 (ENSPPAG00000038071) HRH2 (ENSPPAG00000033874) SFXN1 (ENSPPAG00000036199) DRD1 (ENSPPAG00000015231) ENSPPAG00000030791 MSX2 (ENSPPAG00000012688) NSG2 (ENSPPAG00000028721) C5orf47 (ENSPPAG00000018189) CPEB4 (ENSPPAG00000030599) BOD1 (ENSPPAG00000033401) STC2 (ENSPPAG00000042436) NKX2-5 (ENSPPAG00000031047) #22 BNIP1 (ENSPPAG00000029895) #23 CREBRF (ENSPPAG00000039864) #24 ATP6V0E1 (ENSPPAG00000037191) #25 ENSPPAG00000043282 RPL26L1 (ENSPPAG00000029664) ENSPPAG00000036347 ERGIC1 (ENSPPAG00000030828) #26 DUSP1 (ENSPPAG00000028299) #28 ENSPPAG00000030109 ENSPPAG00000014966 #30 SH3PXD2B (ENSPPAG00000028491) UBTD2 (ENSPPAG00000040436) EFCAB9 (ENSPPAG00000037845) ENSPPAG00000041942 STK10 (ENSPPAG00000017062) Chimpanzee MODERN SPECIES 18 ENSPTRG00000046052 SIMC1 (ENSPTRG00000017557) ENSPTRG00000017556 THOC3 (ENSPTRG00000017594) CPLX2 (ENSPTRG00000048326) HRH2 (ENSPTRG00000017551) SFXN1 (ENSPTRG00000017550) DRD1 (ENSPTRG00000049206) ENSPTRG00000048982 MSX2 (ENSPTRG00000017548) NSG2 (ENSPTRG00000017547) C5H5orf47 (ENSPTRG00000017546) CPEB4 (ENSPTRG00000017545) BOD1 (ENSPTRG00000017544) STC2 (ENSPTRG00000017543) NKX2-5 (ENSPTRG00000017542) #22 BNIP1 (ENSPTRG00000017541) #23 CREBRF (ENSPTRG00000017540) #24 ATP6V0E1 (ENSPTRG00000017538) #25 ENSPTRG00000041040 RPL26L1 (ENSPTRG00000043990) ENSPTRG00000046007 ERGIC1 (ENSPTRG00000017535) #26 DUSP1 (ENSPTRG00000017534) #28 ENSPTRG00000046003 NEURL1B (ENSPTRG00000033712) #30 SH3PXD2B (ENSPTRG00000017531) UBTD2 (ENSPTRG00000044878) EFCAB9 (ENSPTRG00000034173) ENSPTRG00000050304 STK10 (ENSPTRG00000017527) Human MODERN SPECIES 17 NOP16 (ENSG00000048162) ARL10 (ENSG00000175414) KIAA1191 (ENSG00000122203) SIMC1 (ENSG00000170085) THOC3 (ENSG00000051596) CPLX2 (ENSG00000145920) HRH2 (ENSG00000113749) SFXN1 (ENSG00000164466) DRD1 (ENSG00000184845) MSX2 (ENSG00000120149) NSG2 (ENSG00000170091) C5orf47 (ENSG00000185056) CPEB4 (ENSG00000113742) BOD1 (ENSG00000145919) STC2 (ENSG00000113739) NKX2-5 (ENSG00000183072) #22 BNIP1 (ENSG00000113734) #23 CREBRF (ENSG00000164463) #24 ATP6V0E1 (ENSG00000113732) #25 RPL26L1 (ENSG00000037241) ERGIC1 (ENSG00000113719) #26 DUSP1 (ENSG00000120129) #28 NEURL1B (ENSG00000214357) #30 SH3PXD2B (ENSG00000174705) UBTD2 (ENSG00000168246) EFCAB9 (ENSG00000214360) STK10 (ENSG00000072786) FBXW11 (ENSG00000072803) SMIM23 (ENSG00000185662) FGF18 (ENSG00000156427) NPM1 (ENSG00000181163) Gorilla MODERN SPECIES 18 KIAA1191 (ENSGGOG00000023834) ENSGGOG00000027093 SIMC1 (ENSGGOG00000005493) ENSGGOG00000038538 CPLX2 (ENSGGOG00000039211) HRH2 (ENSGGOG00000010675) SFXN1 (ENSGGOG00000008195) DRD1 (ENSGGOG00000041060) ENSGGOG00000041720 MSX2 (ENSGGOG00000025973) NSG2 (ENSGGOG00000012927) C5orf47 (ENSGGOG00000013448) CPEB4 (ENSGGOG00000010097) BOD1 (ENSGGOG00000010925) STC2 (ENSGGOG00000013736) NKX2-5 (ENSGGOG00000017092) #22 BNIP1 (ENSGGOG00000002239) #23 CREBRF (ENSGGOG00000011220) #24 ATP6V0E1 (ENSGGOG00000006701) #25 ENSGGOG00000038246 RPL26L1 (ENSGGOG00000025582) ENSGGOG00000044004 ERGIC1 (ENSGGOG00000008455) #26 DUSP1 (ENSGGOG00000007135) #28 ENSGGOG00000004882 #30 SH3PXD2B (ENSGGOG00000008765) UBTD2 (ENSGGOG00000043610) EFCAB9 (ENSGGOG00000011373) STK10 (ENSGGOG00000012427) FBXW11 (ENSGGOG00000007880) SMIM23 (ENSGGOG00000004301) Orangutan MODERN SPECIES 18 FAM193B (ENSPPYG00000016098) TMED9 (ENSPPYG00000033004) B4GALT7 (ENSPPYG00000038147) THOC3 (ENSPPYG00000016066) CPLX2 (ENSPPYG00000016064) HRH2 (ENSPPYG00000016150) SFXN1 (ENSPPYG00000016063) DRD1 (ENSPPYG00000016062) MSX2 (ENSPPYG00000016061) ENSPPYG00000038848 NSG2 (ENSPPYG00000016060) C5orf47 (ENSPPYG00000016059) ENSPPYG00000031520 ENSPPYG00000016057 STC2 (ENSPPYG00000031955) ENSPPYG00000039258 #22 BNIP1 (ENSPPYG00000016054) #23 CREBRF (ENSPPYG00000016053) #24 ATP6V0E1 (ENSPPYG00000039284) #25 ENSPPYG00000016051 RPL26L1 (ENSPPYG00000025929) ERGIC1 (ENSPPYG00000016049) #26 DUSP1 (ENSPPYG00000016048) #28 ENSPPYG00000016047 NEURL1B (ENSPPYG00000016046) #30 SH3PXD2B (ENSPPYG00000016044) UBTD2 (ENSPPYG00000040678) EFCAB9 (ENSPPYG00000016042) STK10 (ENSPPYG00000016041) FBXW11 (ENSPPYG00000016040) SMIM23 (ENSPPYG00000016039) Gibbon MODERN SPECIES 11 KIAA1191 (ENSNLEG00000030905) SIMC1 (ENSNLEG00000012464) THOC3 (ENSNLEG00000000593) CPLX2 (ENSNLEG00000000585) HRH2 (ENSNLEG00000000579) SFXN1 (ENSNLEG00000000555) DRD1 (ENSNLEG00000032546) ENSNLEG00000030116 MSX2 (ENSNLEG00000000548) ENSNLEG00000033959 NSG2 (ENSNLEG00000000522) C5orf47 (ENSNLEG00000027778) CPEB4 (ENSNLEG00000000487) BOD1 (ENSNLEG00000000476) STC2 (ENSNLEG00000000463) NKX2-5 (ENSNLEG00000000457) #22 BNIP1 (ENSNLEG00000000453) #23 ENSNLEG00000000442 #24 ENSNLEG00000030031 #25 ERGIC1 (ENSNLEG00000000407) #26 ENSNLEG00000033458 DUSP1 (ENSNLEG00000035887) #28 ENSNLEG00000000392 #30 SH3PXD2B (ENSNLEG00000000384) UBTD2 (ENSNLEG00000000381) EFCAB9 (ENSNLEG00000000378) STK10 (ENSNLEG00000000350) ENSNLEG00000031400 FBXW11 (ENSNLEG00000000338) ENSNLEG00000000336 ENSNLEG00000000334 Cercopithecidae ANCESTRAL SPECIES 5 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00910000146891 ENSGT00940000159824.c ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a ENSGT00910000147916 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b.j ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00910000148172 ENSGT00940000156818 ENSGT00940000155898.c ENSGT00390000017300 ENSGT00620000089286 Cercopithecinae ANCESTRAL SPECIES 9 ENSGT00940000160017 ENSGT00390000000537.f.a ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00910000146891 ENSGT00940000159824.c ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b.j ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898.c ENSGT00390000017300 ENSGT00620000089286 ENSGT00940000159553 Cercopithecinae_a ANCESTRAL SPECIES 9 ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00910000146891 ENSGT00940000159824.c ENSGT00940000154276.hb.b ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a ENSGT00910000147916 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b.j ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898.c ENSGT00390000017300 ENSGT00620000089286 ENSGT00940000159553 Macaca ANCESTRAL SPECIES 7 ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00910000146891 ENSGT00940000159824.c ENSGT00940000154276.hb.b ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a ENSGT00910000147916 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b.i.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898.c ENSGT00390000017300 ENSGT00620000089286 ENSGT00940000159553 Pig-tailed macaque MODERN SPECIES 566 THOC3 (ENSMNEG00000043023) CPLX2 (ENSMNEG00000017663) HRH2 (ENSMNEG00000039778) SFXN1 (ENSMNEG00000043255) DRD1 (ENSMNEG00000011662) ENSMNEG00000040948 MSX2 (ENSMNEG00000036098) ENSMNEG00000030903 ENSMNEG00000038634 ENSMNEG00000018921 NSG2 (ENSMNEG00000030122) C5orf47 (ENSMNEG00000036162) CPEB4 (ENSMNEG00000034689) BOD1 (ENSMNEG00000038516) STC2 (ENSMNEG00000032109) NKX2-5 (ENSMNEG00000016498) #22 BNIP1 (ENSMNEG00000033003) #23 CREBRF (ENSMNEG00000032133) #24 ATP6V0E1 (ENSMNEG00000036422) #25 RPL26L1 (ENSMNEG00000029899) ERGIC1 (ENSMNEG00000031904) #26 DUSP1 (ENSMNEG00000043275) #28 NEURL1B (ENSMNEG00000044968) #30 SH3PXD2B (ENSMNEG00000036165) ENSMNEG00000035122 UBTD2 (ENSMNEG00000031278) EFCAB9 (ENSMNEG00000014910) STK10 (ENSMNEG00000029184) FBXW11 (ENSMNEG00000033472) SMIM23 (ENSMNEG00000029674) ENSMNEG00000044745 Macaca_a ANCESTRAL SPECIES 8 ENSGT00940000166141 ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00910000146891 ENSGT00940000155491.d ENSGT00940000159824.c ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979.s.a ENSGT00940000154979.s.b.b ENSGT00390000005989.a ENSGT01100000263493.a.b.a.b.b.b.a.a.a.a.b.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898.c ENSGT00390000017300 ENSGT00620000089286 ENSGT00940000159553 ENSGT00940000153052.c.b.a.a.a.b Crab-eating macaque MODERN SPECIES 16 ENSMFAG00000055341 THOC3 (ENSMFAG00000034476) CPLX2 (ENSMFAG00000037899) HRH2 (ENSMFAG00000032099) SFXN1 (ENSMFAG00000040820) DRD1 (ENSMFAG00000015744) ENSMFAG00000010945 ENSMFAG00000062346 MSX2 (ENSMFAG00000056450) ENSMFAG00000010780 NSG2 (ENSMFAG00000033258) CPEB4 (ENSMFAG00000003075) ENSMFAG00000003066 STC2 (ENSMFAG00000048596) ENSMFAG00000060111 NKX2-5 (ENSMFAG00000034569) #22 BNIP1 (ENSMFAG00000037018) #23 CREBRF (ENSMFAG00000036600) #24 ATP6V0E1 (ENSMFAG00000045429) #25 ERGIC1 (ENSMFAG00000037788) #26 DUSP1 (ENSMFAG00000044045) #28 SH3PXD2B (ENSMFAG00000040954) UBTD2 (ENSMFAG00000052150) EFCAB9 (ENSMFAG00000043157) ENSMFAG00000051726 STK10 (ENSMFAG00000033923) ENSMFAG00000057552 ENSMFAG00000047803 FBXW11 (ENSMFAG00000039918) SMIM23 (ENSMFAG00000039057) ENSMFAG00000039380 Rhesus MODERN SPECIES 16 ENSMMUG00000049085 ENSMMUG00000041279 THOC3 (ENSMMUG00000018737) HRH2 (ENSMMUG00000014245) ENSMMUG00000052819 SFXN1 (ENSMMUG00000005148) DRD1 (ENSMMUG00000005147) ENSMMUG00000039572 MSX2 (ENSMMUG00000004932) NSG2 (ENSMMUG00000059444) CPEB4 (ENSMMUG00000019926) BOD1 (ENSMMUG00000013793) ENSMMUG00000054693 STC2 (ENSMMUG00000014782) ENSMMUG00000055739 NKX2-5 (ENSMMUG00000064883) #22 BNIP1 (ENSMMUG00000014607) #23 CREBRF (ENSMMUG00000005909) #24 ATP6V0E1 (ENSMMUG00000059290) #25 ERGIC1 (ENSMMUG00000003067) #26 DUSP1 (ENSMMUG00000059336) #28 NEURL1B (ENSMMUG00000008848) #30 SH3PXD2B (ENSMMUG00000010102) UBTD2 (ENSMMUG00000052139) EFCAB9 (ENSMMUG00000059414) ENSMMUG00000057388 STK10 (ENSMMUG00000006811) FBXW11 (ENSMMUG00000016008) SMIM23 (ENSMMUG00000057889) FGF18 (ENSMMUG00000019401) NPM1 (ENSMMUG00000015781) Cercopithecinae_b ANCESTRAL SPECIES 4 ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00910000146891 ENSGT00940000159824.c ENSGT00940000154276.hb.b ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a ENSGT00910000147916 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b.j ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898.c ENSGT00390000017300 ENSGT00620000089286 ENSGT00940000159553 Olive baboon MODERN SPECIES 15 ENSPANG00000038800 ENSPANG00000038898 THOC3 (ENSPANG00000012114) CPLX2 (ENSPANG00000023733) HRH2 (ENSPANG00000019607) SFXN1 (ENSPANG00000023643) DRD1 (ENSPANG00000017071) ENSPANG00000043119 ENSPANG00000045235 MSX2 (ENSPANG00000041175) ENSPANG00000045766 ENSPANG00000019682 CPEB4 (ENSPANG00000009300) BOD1 (ENSPANG00000005513) STC2 (ENSPANG00000045597) NKX2-5 (ENSPANG00000012362) #22 BNIP1 (ENSPANG00000003761) #23 CREBRF (ENSPANG00000013059) #24 ENSPANG00000011468 #25 RPL26L1 (ENSPANG00000012204) ERGIC1 (ENSPANG00000023223) #26 ENSPANG00000049887 #28 NEURL1B (ENSPANG00000001624) #30 SH3PXD2B (ENSPANG00000013857) UBTD2 (ENSPANG00000002422) EFCAB9 (ENSPANG00000003762) STK10 (ENSPANG00000009341) FBXW11 (ENSPANG00000006849) SMIM23 (ENSPANG00000003366) FGF18 (ENSPANG00000017661) NPM1 (ENSPANG00000000217) Cercopithecinae_d ANCESTRAL SPECIES 53 ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00910000146891 ENSGT00940000159824.c ENSGT00940000154276.hb.b ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a ENSGT00910000147916 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a.d ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b.j ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898.c ENSGT00390000017300 ENSGT00620000089286 ENSGT00940000159553 Sooty mangabey MODERN SPECIES 597 THOC3 (ENSCATG00000029038) CPLX2 (ENSCATG00000044259) HRH2 (ENSCATG00000045358) SFXN1 (ENSCATG00000030378) DRD1 (ENSCATG00000006084) ENSCATG00000009773 MSX2 (ENSCATG00000022593) ENSCATG00000040728 ENSCATG00000040643 ENSCATG00000011643 NSG2 (ENSCATG00000029990) C5orf47 (ENSCATG00000012564) CPEB4 (ENSCATG00000014550) ENSCATG00000005639 STC2 (ENSCATG00000030924) NKX2-5 (ENSCATG00000031410) #22 BNIP1 (ENSCATG00000043162) #23 CREBRF (ENSCATG00000040516) #24 ATP6V0E1 (ENSCATG00000036579) #25 RPL26L1 (ENSCATG00000029601) ERGIC1 (ENSCATG00000041026) #26 DUSP1 (ENSCATG00000027456) #28 NEURL1B (ENSCATG00000038257) #30 SH3PXD2B (ENSCATG00000043516) UBTD2 (ENSCATG00000032931) EFCAB9 (ENSCATG00000042923) STK10 (ENSCATG00000036488) FBXW11 (ENSCATG00000000142) SMIM23 (ENSCATG00000031141) ENSCATG00000040661 FGF18 (ENSCATG00000040646) Drill MODERN SPECIES 960 ENSMLEG00000030320 STC2 (ENSMLEG00000026461) NKX2-5 (ENSMLEG00000000339) #22 BNIP1 (ENSMLEG00000039126) #23 CREBRF (ENSMLEG00000000513) #24 ATP6V0E1 (ENSMLEG00000030149) #25 ENSMLEG00000037483 ERGIC1 (ENSMLEG00000029804) #26 ENSMLEG00000040155 DUSP1 (ENSMLEG00000039172) #28 NEURL1B (ENSMLEG00000033205) #30 SH3PXD2B (ENSMLEG00000029587) UBTD2 (ENSMLEG00000038379) EFCAB9 (ENSMLEG00000038052) STK10 (ENSMLEG00000041182) FBXW11 (ENSMLEG00000035049) SMIM23 (ENSMLEG00000042760) ENSMLEG00000040662 Vervet Monkey MODERN SPECIES 15 ARL10 (ENSCSAG00000009428) KIAA1191 (ENSCSAG00000009441) SIMC1 (ENSCSAG00000009447) THOC3 (ENSCSAG00000009454) CPLX2 (ENSCSAG00000009460) HRH2 (ENSCSAG00000009468) SFXN1 (ENSCSAG00000009487) DRD1 (ENSCSAG00000009491) ENSCSAG00000019724 MSX2 (ENSCSAG00000009496) NSG2 (ENSCSAG00000009499) C5orf47 (ENSCSAG00000009504) CPEB4 (ENSCSAG00000009516) BOD1 (ENSCSAG00000009522) STC2 (ENSCSAG00000009529) NKX2-5 (ENSCSAG00000009533) #22 BNIP1 (ENSCSAG00000009541) #23 CREBRF (ENSCSAG00000009545) #24 ATP6V0E1 (ENSCSAG00000009548) #25 ENSCSAG00000009551 ERGIC1 (ENSCSAG00000009579) #26 DUSP1 (ENSCSAG00000009591) #28 NEURL1B (ENSCSAG00000009597) #30 SH3PXD2B (ENSCSAG00000009606) UBTD2 (ENSCSAG00000009612) EFCAB9 (ENSCSAG00000009621) STK10 (ENSCSAG00000009634) FBXW11 (ENSCSAG00000009643) SMIM23 (ENSCSAG00000009650) ENSCSAG00000009657 FGF18 (ENSCSAG00000009667) Rhinopithecus ANCESTRAL SPECIES 118 ENSGT00940000159824.c ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a ENSGT00910000147916 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b.i.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00910000148172 ENSGT00940000156818 ENSGT00940000155898.c ENSGT00390000017300 ENSGT00620000089286 Golden snub-nosed monkey MODERN SPECIES 1733 MSX2 (ENSRROG00000036930) ENSRROG00000040238 C5orf47 (ENSRROG00000008119) NSG2 (ENSRROG00000032380) CPEB4 (ENSRROG00000029196) BOD1 (ENSRROG00000039526) STC2 (ENSRROG00000030679) NKX2-5 (ENSRROG00000043318) #22 BNIP1 (ENSRROG00000035092) #23 CREBRF (ENSRROG00000041689) #24 ATP6V0E1 (ENSRROG00000035355) #25 ENSRROG00000034464 ERGIC1 (ENSRROG00000031072) #26 DUSP1 (ENSRROG00000027680) #28 NEURL1B (ENSRROG00000043630) #30 SH3PXD2B (ENSRROG00000038290) UBTD2 (ENSRROG00000038688) EFCAB9 (ENSRROG00000001287) ENSRROG00000039795 STK10 (ENSRROG00000043810) FBXW11 (ENSRROG00000042640) SMIM23 (ENSRROG00000037550) ENSRROG00000031061 Black snub-nosed monkey MODERN SPECIES 1977 ENSRBIG00000028275 BOD1 (ENSRBIG00000027366) STC2 (ENSRBIG00000042135) NKX2-5 (ENSRBIG00000007305) #22 BNIP1 (ENSRBIG00000024422) #23 CREBRF (ENSRBIG00000041000) #24 ATP6V0E1 (ENSRBIG00000000223) #25 RPL26L1 (ENSRBIG00000029430) ERGIC1 (ENSRBIG00000032953) #26 DUSP1 (ENSRBIG00000037066) #28 NEURL1B (ENSRBIG00000037294) #30 SH3PXD2B (ENSRBIG00000036914) UBTD2 (ENSRBIG00000037359) EFCAB9 (ENSRBIG00000031355) ENSRBIG00000030762 STK10 (ENSRBIG00000037834) Platyrrhini ANCESTRAL SPECIES 19 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537.f ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.s #25 ENSGT00390000014165.c.b ENSGT00900000143489 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 Cebidae ANCESTRAL SPECIES 24 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537.f ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.s #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b.g.b Cebidae_a ANCESTRAL SPECIES 19 ENSGT00940000163830.c ENSGT00940000160017 ENSGT00390000000537.f ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979.s.a.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.s #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.b.b.g.b.a Bolivian squirrel monkey MODERN SPECIES 123 ENSSBOG00000022208 ARL10 (ENSSBOG00000031819) KIAA1191 (ENSSBOG00000026134) SIMC1 (ENSSBOG00000025281) THOC3 (ENSSBOG00000022663) CPLX2 (ENSSBOG00000031125) HRH2 (ENSSBOG00000032885) SFXN1 (ENSSBOG00000021468) DRD1 (ENSSBOG00000014839) MSX2 (ENSSBOG00000032992) NSG2 (ENSSBOG00000028874) C5orf47 (ENSSBOG00000011758) CPEB4 (ENSSBOG00000002632) ENSSBOG00000023774 STC2 (ENSSBOG00000035805) NKX2-5 (ENSSBOG00000024121) #22 BNIP1 (ENSSBOG00000029104) #23 ENSSBOG00000026680 CREBRF (ENSSBOG00000031151) #24 ATP6V0E1 (ENSSBOG00000031772) #25 RPL26L1 (ENSSBOG00000027992) ERGIC1 (ENSSBOG00000032967) #26 DUSP1 (ENSSBOG00000027324) #28 NEURL1B (ENSSBOG00000029939) #30 SH3PXD2B (ENSSBOG00000014112) UBTD2 (ENSSBOG00000013274) EFCAB9 (ENSSBOG00000019620) STK10 (ENSSBOG00000033405) FBXW11 (ENSSBOG00000023046) SMIM23 (ENSSBOG00000018130) FGF18 (ENSSBOG00000024519) Capuchin MODERN SPECIES 91 VIL1 (ENSCCAG00000026608) CTDSP1 (ENSCCAG00000035606) SLC11A1 (ENSCCAG00000036035) CATIP (ENSCCAG00000029357) TMBIM1 (ENSCCAG00000037987) PNKD (ENSCCAG00000036713) AAMP (ENSCCAG00000016105) ENSCCAG00000036905 MSX2 (ENSCCAG00000037478) NSG2 (ENSCCAG00000024923) ENSCCAG00000036672 C5orf47 (ENSCCAG00000038085) CPEB4 (ENSCCAG00000037039) ENSCCAG00000031306 STC2 (ENSCCAG00000020916) NKX2-5 (ENSCCAG00000030136) #22 BNIP1 (ENSCCAG00000034317) #23 ENSCCAG00000019031 ENSCCAG00000027575 #24 Marmoset MODERN SPECIES 11 HRH2 (ENSCJAG00000005384) SFXN1 (ENSCJAG00000005397) ENSCJAG00000072817 DRD1 (ENSCJAG00000046402) ENSCJAG00000084066 ENSCJAG00000022277 MSX2 (ENSCJAG00000070729) ENSCJAG00000067799 ENSCJAG00000075851 NSG2 (ENSCJAG00000019152) C5orf47 (ENSCJAG00000076312) CPEB4 (ENSCJAG00000019166) ENSCJAG00000031971 ENSCJAG00000045816 STC2 (ENSCJAG00000054466) NKX2-5 (ENSCJAG00000078127) #22 BNIP1 (ENSCJAG00000019186) #23 CREBRF (ENSCJAG00000019193) #24 ERGIC1 (ENSCJAG00000019238) #26 DUSP1 (ENSCJAG00000067622) #28 NEURL1B (ENSCJAG00000019254) #30 SH3PXD2B (ENSCJAG00000019258) UBTD2 (ENSCJAG00000046779) ENSCJAG00000047953 EFCAB9 (ENSCJAG00000019273) ENSCJAG00000069421 ENSCJAG00000069688 STK10 (ENSCJAG00000019275) ENSCJAG00000073693 FBXW11 (ENSCJAG00000019297) SMIM23 (ENSCJAG00000019324) Mas night monkey MODERN SPECIES 610 MSX2 (ENSANAG00000019738) NSG2 (ENSANAG00000026283) C5orf47 (ENSANAG00000026045) CPEB4 (ENSANAG00000038371) BOD1 (ENSANAG00000025713) STC2 (ENSANAG00000031511) NKX2-5 (ENSANAG00000024360) #22 BNIP1 (ENSANAG00000033155) #23 ENSANAG00000026625 CREBRF (ENSANAG00000029119) #24 ENSANAG00000025907 #25 RPL26L1 (ENSANAG00000034277) ENSANAG00000033316 ERGIC1 (ENSANAG00000037298) #26 DUSP1 (ENSANAG00000027062) #28 NEURL1B (ENSANAG00000038171) #30 SH3PXD2B (ENSANAG00000014072) UBTD2 (ENSANAG00000033217) EFCAB9 (ENSANAG00000032826) STK10 (ENSANAG00000027679) FBXW11 (ENSANAG00000036790) ENSANAG00000024342 Laurasiatheria ANCESTRAL SPECIES 8 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00900000143489 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 Laurasiatheria_a ANCESTRAL SPECIES 9 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00900000143489 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 Artiodactyla ANCESTRAL SPECIES 8 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.a #25 ENSGT00390000014165.c.b ENSGT00900000143489 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 Suina ANCESTRAL SPECIES 25 ENSGT00940000155949 ENSGT00390000018319.a.b.a ENSGT00940000155897 ENSGT00390000007246 ENSGT00390000009329.b ENSGT00940000155498 ENSGT01100000263506.b.b ENSGT00940000155389 ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.a.a #25 ENSGT00390000014165.c.b ENSGT00900000143489 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00940000159553 ENSGT00940000153052.c.b.a.a.b Pig MODERN SPECIES 7 MAP1B (ENSSSCG00000016974) MRPS27 (ENSSSCG00000023818) ENSSSCG00000046085 PTCD2 (ENSSSCG00000016975) ZNF366 (ENSSSCG00000016976) ENSSSCG00000016977 TNPO1 (ENSSSCG00000027293) DRD1 (ENSSSCG00000029037) ENSSSCG00000034025 MSX2 (ENSSSCG00000034500) NSG2 (ENSSSCG00000016979) C5orf47 (ENSSSCG00000035512) CPEB4 (ENSSSCG00000016981) ENSSSCG00000016982 STC2 (ENSSSCG00000016983) NKX2-5 (ENSSSCG00000036285) #22 BNIP1 (ENSSSCG00000016985) #23 CREBRF (ENSSSCG00000016986) #24 ENSSSCG00000016990 #25 RPL26L1 (ENSSSCG00000016989) ENSSSCG00000035845 ERGIC1 (ENSSSCG00000016988) #26 ENSSSCG00000056851 DUSP1 (ENSSSCG00000016991) #28 NEURL1B (ENSSSCG00000016992) #30 SH3PXD2B (ENSSSCG00000027378) UBTD2 (ENSSSCG00000023948) EFCAB9 (ENSSSCG00000016995) STK10 (ENSSSCG00000022478) FBXW11 (ENSSSCG00000023307) ENSSSCG00000023757 Chacoan peccary MODERN SPECIES 97 CPEB4 (ENSCWAG00000000128) ENSCWAG00000000497 STC2 (ENSCWAG00000000525) NKX2-5 (ENSCWAG00000000540) #22 BNIP1 (ENSCWAG00000000552) #23 CREBRF (ENSCWAG00000000582) #24 ENSCWAG00000000600 #25 RPL26L1 (ENSCWAG00000000616) ENSCWAG00000000627 ERGIC1 (ENSCWAG00000000647) #26 DUSP1 (ENSCWAG00000000695) #28 NEURL1B (ENSCWAG00000000720) #30 SH3PXD2B (ENSCWAG00000000790) UBTD2 (ENSCWAG00000000837) EFCAB9 (ENSCWAG00000000850) STK10 (ENSCWAG00000000878) FBXW11 (ENSCWAG00000000944) FGF18 (ENSCWAG00000001037) NPM1 (ENSCWAG00000001072) Artiodactyla_a ANCESTRAL SPECIES 7 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.a #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b Camelidae ANCESTRAL SPECIES 57 ENSGT00390000003426 ENSGT00940000160017 ENSGT00940000163830 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.eb #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b ENSGT00940000160629 Arabian camel MODERN SPECIES 14 ENSCDRG00005003641 NOP16 (ENSCDRG00005003667) ARL10 (ENSCDRG00005003745) KIAA1191 (ENSCDRG00005003792) ENSCDRG00005003852 THOC3 (ENSCDRG00005003949) CPLX2 (ENSCDRG00005003984) HRH2 (ENSCDRG00005004042) SFXN1 (ENSCDRG00005004064) DRD1 (ENSCDRG00005004119) MSX2 (ENSCDRG00005004133) NSG2 (ENSCDRG00005004158) CPEB4 (ENSCDRG00005004317) ENSCDRG00005004889 STC2 (ENSCDRG00005004904) NKX2-5 (ENSCDRG00005004925) #22 BNIP1 (ENSCDRG00005004968) #23 CREBRF (ENSCDRG00005005000) #24 ENSCDRG00005005036 ENSCDRG00005005054 #25 RPL26L1 (ENSCDRG00005005086) ERGIC1 (ENSCDRG00005005118) #26 ENSCDRG00005005259 #28 DUSP1 (ENSCDRG00005005269) #28 NEURL1B (ENSCDRG00005005289) #30 SH3PXD2B (ENSCDRG00005005308) UBTD2 (ENSCDRG00005005351) EFCAB9 (ENSCDRG00005005368) STK10 (ENSCDRG00005005406) FBXW11 (ENSCDRG00005005462) FGF18 (ENSCDRG00005005676) Artiodactyla_b ANCESTRAL SPECIES 8 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.a #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b Pecora ANCESTRAL SPECIES 25 ENSGT00940000153288.b ENSGT00940000157156 ENSGT00390000004228 ENSGT00940000155831 ENSGT00950000182983.B.a.b ENSGT00390000008107.c.a ENSGT00550000074890 ENSGT00390000018706.m.a ENSGT00510000048902.a ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.a #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b ENSGT00940000160629 Percora_a ANCESTRAL SPECIES 26 ENSGT00940000153288.a.a.d ENSGT00940000157156 ENSGT00390000004228 ENSGT00940000155831 ENSGT00950000182983.B.a.b ENSGT00390000008107.c.a ENSGT00550000074890 ENSGT00390000018706.m.a ENSGT00510000048902.a ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.a #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b.m ENSGT00940000160629 Bovidae ANCESTRAL SPECIES 26 ENSGT00510000046986.x.a.c ENSGT00940000157156 ENSGT00390000004228 ENSGT00940000155831 ENSGT00950000182983.B.a.b ENSGT00390000008107.c.a ENSGT00550000074890 ENSGT00390000018706.m.a ENSGT00510000048902.a ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.a #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b.m ENSGT00940000160629 Bovinae ANCESTRAL SPECIES 25 ENSGT00940000155831 ENSGT00950000182983.B.a.b ENSGT00390000008107.c.a.r ENSGT00390000008107.c.a.q ENSGT00550000074890 ENSGT00390000018706.m.a ENSGT00510000048902.a ENSGT00940000159824 ENSGT00940000154911.l ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00420000029792.d ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.a #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT01000000218258 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b.m Bos ANCESTRAL SPECIES 26 ENSGT00940000155831 ENSGT00950000182983.B.a.b ENSGT00390000008107.c.a.r ENSGT00390000008107.c.a.q ENSGT00550000074890 ENSGT00390000018706.m.a ENSGT00510000048902.a ENSGT00940000159824 ENSGT00940000154911.l ENSGT00390000000483.a.a ENSGT00940000168505 ENSGT00940000154998.a.a ENSGT00420000029792.d ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.a #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT01000000218258 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b.m Bos_b ANCESTRAL SPECIES 29 ENSGT00940000155831 ENSGT00950000182983.B.a.b ENSGT00390000008107.c.a.r ENSGT00390000008107.c.a.q ENSGT00550000074890 ENSGT00390000018706.m.a ENSGT00510000048902.a ENSGT00940000159824 ENSGT00940000154911.l ENSGT00390000000483.a.a ENSGT00940000168505 ENSGT00940000154998.a.a ENSGT00420000029792.d ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.a #25 ENSGT00390000014165.d ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT01000000218258 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b.m Cow MODERN SPECIES 12 UTP15 (ENSBTAG00000006843) ARHGEF28 (ENSBTAG00000005633) ENC1 (ENSBTAG00000026369) ENSBTAG00000034138 HEXB (ENSBTAG00000015512) GFM2 (ENSBTAG00000015519) NSA2 (ENSBTAG00000003066) FAM169A (ENSBTAG00000016002) MSX2 (ENSBTAG00000013873) ENSBTAG00000048786 NSG2 (ENSBTAG00000000564) C20H5orf47 (ENSBTAG00000054459) CPEB4 (ENSBTAG00000009995) BOD1 (ENSBTAG00000034598) STC2 (ENSBTAG00000001823) NKX2-5 (ENSBTAG00000020568) #22 BNIP1 (ENSBTAG00000002021) #23 CREBRF (ENSBTAG00000002020) #24 ATP6V0E1 (ENSBTAG00000015100) #25 RPL26L1 (ENSBTAG00000015099) ERGIC1 (ENSBTAG00000015955) #26 DUSP1 (ENSBTAG00000013863) #28 NEURL1B (ENSBTAG00000001429) #30 SH3PXD2B (ENSBTAG00000009019) UBTD2 (ENSBTAG00000034659) EFCAB9 (ENSBTAG00000008876) STK10 (ENSBTAG00000017457) FBXW11 (ENSBTAG00000015376) ENSBTAG00000053610 ENSBTAG00000054615 FGF18 (ENSBTAG00000000128) Hybrid Bos Indicus MODERN SPECIES 12 ENC1 (ENSBIXG00005002964) ENSBIXG00005018309 ENSBIXG00005018408 ENSBIXG00005002985 GFM2 (ENSBIXG00005002998) ENSBIXG00005018592 FAM169A (ENSBIXG00005018635) MSX2 (ENSBIXG00005018660) ENSBIXG00005003031 ENSBIXG00005018701 NSG2 (ENSBIXG00005018735) ENSBIXG00005018775 CPEB4 (ENSBIXG00005018897) ENSBIXG00005018925 STC2 (ENSBIXG00005018970) NKX2-5 (ENSBIXG00005018998) #22 BNIP1 (ENSBIXG00005019018) #23 CREBRF (ENSBIXG00005002650) #24 ENSBIXG00005019047 ENSBIXG00005005519 #25 ENSBIXG00005019189 #26 DUSP1 (ENSBIXG00005007821) #28 NEURL1B (ENSBIXG00005019283) #30 SH3PXD2B (ENSBIXG00005019342) ENSBIXG00005003145 UBTD2 (ENSBIXG00005007823) EFCAB9 (ENSBIXG00005019383) STK10 (ENSBIXG00005019395) FBXW11 (ENSBIXG00005006031) ENSBIXG00005019479 ENSBIXG00005003177 Bos_a ANCESTRAL SPECIES 74 ENSGT00950000182983.B.a.b ENSGT00390000008107.c.a.r ENSGT00390000008107.c.a.q ENSGT00550000074890 ENSGT00390000018706.m.a ENSGT00510000048902.a ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00420000029792.d ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.a #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT01000000218258 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b.m Wild yak MODERN SPECIES 1127 ENC1 (ENSBMUG00000018790) ENSBMUG00000018779 ENSBMUG00000018337 GFM2 (ENSBMUG00000018109) ENSBMUG00000018033 FAM169A (ENSBMUG00000017996) MSX2 (ENSBMUG00000017970) ENSBMUG00000017952 ENSBMUG00000017938 NSG2 (ENSBMUG00000017915) ENSBMUG00000017901 CPEB4 (ENSBMUG00000017818) ENSBMUG00000017636 STC2 (ENSBMUG00000017613) NKX2-5 (ENSBMUG00000017585) #22 BNIP1 (ENSBMUG00000017555) #23 CREBRF (ENSBMUG00000017514) #24 ENSBMUG00000017490 #25 RPL26L1 (ENSBMUG00000017477) ERGIC1 (ENSBMUG00000017458) #26 Domestic yak MODERN SPECIES 15 GFM2 (ENSBGRG00000012114) ENSBGRG00000012164 ENSBGRG00000012194 FAM169A (ENSBGRG00000012377) MSX2 (ENSBGRG00000012586) NSG2 (ENSBGRG00000012654) CPEB4 (ENSBGRG00000012907) ENSBGRG00000013541 ENSBGRG00000013569 ENSBGRG00000013644 STC2 (ENSBGRG00000013735) NKX2-5 (ENSBGRG00000013796) #22 BNIP1 (ENSBGRG00000013853) #23 CREBRF (ENSBGRG00000014123) #24 ENSBGRG00000014274 #25 ENSBGRG00000014439 ERGIC1 (ENSBGRG00000014556) #26 DUSP1 (ENSBGRG00000015028) #28 NEURL1B (ENSBGRG00000015084) #30 SH3PXD2B (ENSBGRG00000015198) ENSBGRG00000015339 STK10 (ENSBGRG00000015407) ENSBGRG00000016111 EFCAB9 (ENSBGRG00000016153) FBXW11 (ENSBGRG00000016280) ENSBGRG00000016831 FGF18 (ENSBGRG00000016855) American bison MODERN SPECIES 3215 STC2 (ENSBBBG00000011679) NKX2-5 (ENSBBBG00000011682) #22 BNIP1 (ENSBBBG00000011701) #23 CREBRF (ENSBBBG00000011711) #24 ENSBBBG00000011722 #25 RPL26L1 (ENSBBBG00000011726) ERGIC1 (ENSBBBG00000002176) #26 DUSP1 (ENSBBBG00000011749) #28 NEURL1B (ENSBBBG00000011766) #30 SH3PXD2B (ENSBBBG00000011784) UBTD2 (ENSBBBG00000011796) EFCAB9 (ENSBBBG00000002192) STK10 (ENSBBBG00000011816) FBXW11 (ENSBBBG00000011859) ENSBBBG00000007881 ENSBBBG00000011871 FGF18 (ENSBBBG00000011877) Caprinae ANCESTRAL SPECIES 24 ENSGT00390000004228 ENSGT00940000155831 ENSGT00950000182983.B.a.b ENSGT00390000008107.c.a.o ENSGT00390000008107.c.a.p ENSGT00550000074890 ENSGT00390000018706.m.a ENSGT00510000048902.a ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000157760.e ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.a #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00390000016262.f ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b.m Goat MODERN SPECIES 12 ARHGEF28 (ENSCHIG00000013942) ENC1 (ENSCHIG00000019428) ENSCHIG00000008375 ENSCHIG00000020660 GFM2 (ENSCHIG00000012765) ENSCHIG00000005844 FAM169A (ENSCHIG00000019541) ENSCHIG00000023343 ENSCHIG00000013293 NSG2 (ENSCHIG00000005307) C5orf47 (ENSCHIG00000015963) CPEB4 (ENSCHIG00000011030) ENSCHIG00000014604 ENSCHIG00000021511 STC2 (ENSCHIG00000005361) NKX2-5 (ENSCHIG00000017420) #22 BNIP1 (ENSCHIG00000007910) #23 CREBRF (ENSCHIG00000011720) #24 ENSCHIG00000023731 #25 RPL26L1 (ENSCHIG00000015371) ERGIC1 (ENSCHIG00000000491) #26 DUSP1 (ENSCHIG00000021879) #28 NEURL1B (ENSCHIG00000011973) #30 SH3PXD2B (ENSCHIG00000017285) ENSCHIG00000019482 UBTD2 (ENSCHIG00000008177) STK10 (ENSCHIG00000022275) FBXW11 (ENSCHIG00000015807) ENSCHIG00000020677 FGF18 (ENSCHIG00000011455) ENSCHIG00000013986 Rambouillet Sheep MODERN SPECIES 7 ANKRA2 (ENSOARG00020022387) UTP15 (ENSOARG00020022284) ARHGEF28 (ENSOARG00020021605) ENC1 (ENSOARG00020021534) ENSOARG00020021358 GFM2 (ENSOARG00020021066) ENSOARG00020020990 FAM169A (ENSOARG00020020874) MSX2 (ENSOARG00020020841) ENSOARG00020020789 NSG2 (ENSOARG00020020679) C5orf47 (ENSOARG00020020601) CPEB4 (ENSOARG00020019809) ENSOARG00020019684 STC2 (ENSOARG00020019635) NKX2-5 (ENSOARG00020019608) #22 BNIP1 (ENSOARG00020019520) #23 CREBRF (ENSOARG00020019431) #24 ATP6V0E1 (ENSOARG00020019362) #25 RPL26L1 (ENSOARG00020019301) ERGIC1 (ENSOARG00020019165) #26 DUSP1 (ENSOARG00020019107) #28 NEURL1B (ENSOARG00020018934) #30 SH3PXD2B (ENSOARG00020018558) ENSOARG00020018509 UBTD2 (ENSOARG00020018478) EFCAB9 (ENSOARG00020018435) STK10 (ENSOARG00020017936) ENSOARG00020017649 FGF18 (ENSOARG00020017567) ENSOARG00020017428 Siberian musk deer MODERN SPECIES 182 UTP15 (ENSMMSG00000015177) ENSMMSG00000015240 ARHGEF28 (ENSMMSG00000015336) ENSMMSG00000015814 ENC1 (ENSMMSG00000015823) ENSMMSG00000015830 GFM2 (ENSMMSG00000015843) ENSMMSG00000015871 FAM169A (ENSMMSG00000015906) ENSMMSG00000015984 NSG2 (ENSMMSG00000016007) CPEB4 (ENSMMSG00000016141) ENSMMSG00000016319 ENSMMSG00000016344 STC2 (ENSMMSG00000016387) NKX2-5 (ENSMMSG00000016422) #22 BNIP1 (ENSMMSG00000016447) #23 CREBRF (ENSMMSG00000016494) #24 ENSMMSG00000016537 #25 RPL26L1 (ENSMMSG00000016583) ERGIC1 (ENSMMSG00000016601) #26 DUSP1 (ENSMMSG00000016631) #28 NEURL1B (ENSMMSG00000016666) #30 SH3PXD2B (ENSMMSG00000016746) UBTD2 (ENSMMSG00000016799) EFCAB9 (ENSMMSG00000016840) STK10 (ENSMMSG00000016886) FBXW11 (ENSMMSG00000016966) FGF18 (ENSMMSG00000017102) ENSMMSG00000017147 TLX3 (ENSMMSG00000017339) Yarkand deer MODERN SPECIES 17 ENSCHYG00000022585 ENSCHYG00000022494 ENSCHYG00000022377 ENSCHYG00000022361 ENSCHYG00000022316 ENSCHYG00000022222 GFM2 (ENSCHYG00000022008) ENSCHYG00000021907 FAM169A (ENSCHYG00000021764) MSX2 (ENSCHYG00000021730) NSG2 (ENSCHYG00000021633) C5orf47 (ENSCHYG00000021506) CPEB4 (ENSCHYG00000020990) ENSCHYG00000020876 STC2 (ENSCHYG00000020794) NKX2-5 (ENSCHYG00000020766) #22 BNIP1 (ENSCHYG00000020650) #23 CREBRF (ENSCHYG00000020340) #24 ENSCHYG00000020276 #25 ENSCHYG00000019954 DUSP1 (ENSCHYG00000019886) #28 NEURL1B (ENSCHYG00000019690) #30 SH3PXD2B (ENSCHYG00000019576) EFCAB9 (ENSCHYG00000019485) STK10 (ENSCHYG00000019133) FBXW11 (ENSCHYG00000018168) ENSCHYG00000018065 ENSCHYG00000017940 FGF18 (ENSCHYG00000017882) ENSCHYG00000017754 TLX3 (ENSCHYG00000017695) Cetacea ANCESTRAL SPECIES 1 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.b.a.a.a #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b.k.a Odontoceti ANCESTRAL SPECIES 1 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.b.a.a.a #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b.k.a.a.a Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.b.a.a.a #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b.k.a.b Dolphin MODERN SPECIES 4726 STC2 (ENSTTRG00000004501) NKX2-5 (ENSTTRG00000004510) #22 Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.b.a.a.a #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b.k.a.b Monodontidae ANCESTRAL SPECIES 7 ENSGT00940000160017 ENSGT00390000000537.q ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00960000191423 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.db.b.a.a.a #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b.k.a.a.a Narwhal MODERN SPECIES 298 ENSMMNG00015008240 SIMC1 (ENSMMNG00015008207) THOC3 (ENSMMNG00015008184) CPLX2 (ENSMMNG00015008154) HRH2 (ENSMMNG00015008125) SFXN1 (ENSMMNG00015008092) DRD1 (ENSMMNG00015008077) ENSMMNG00015008062 MSX2 (ENSMMNG00015008049) NSG2 (ENSMMNG00015008022) C5orf47 (ENSMMNG00015008001) CPEB4 (ENSMMNG00015007861) ENSMMNG00015007782 STC2 (ENSMMNG00015007763) ENSMMNG00015007753 NKX2-5 (ENSMMNG00015007742) #22 BNIP1 (ENSMMNG00015007725) #23 CREBRF (ENSMMNG00015007693) #24 ENSMMNG00015007663 #25 RPL26L1 (ENSMMNG00015007637) ENSMMNG00015007623 ERGIC1 (ENSMMNG00015007594) #26 DUSP1 (ENSMMNG00015007561) #28 NEURL1B (ENSMMNG00015007510) #30 SH3PXD2B (ENSMMNG00015007447) UBTD2 (ENSMMNG00015007429) EFCAB9 (ENSMMNG00015007406) STK10 (ENSMMNG00015007367) ENSMMNG00015007348 FBXW11 (ENSMMNG00015007223) SMIM23 (ENSMMNG00015007147) Beluga whale MODERN SPECIES 33 CPLX2 (ENSDLEG00000010995) HRH2 (ENSDLEG00000011017) SFXN1 (ENSDLEG00000011033) DRD1 (ENSDLEG00000011094) ENSDLEG00000011099 MSX2 (ENSDLEG00000011108) NSG2 (ENSDLEG00000011113) C5orf47 (ENSDLEG00000011128) CPEB4 (ENSDLEG00000011156) ENSDLEG00000011214 STC2 (ENSDLEG00000011225) NKX2-5 (ENSDLEG00000011239) #22 BNIP1 (ENSDLEG00000011252) #23 CREBRF (ENSDLEG00000011269) #24 ATP6V0E1 (ENSDLEG00000011297) #25 RPL26L1 (ENSDLEG00000011305) ERGIC1 (ENSDLEG00000011315) #26 ENSDLEG00000011343 DUSP1 (ENSDLEG00000011353) #28 NEURL1B (ENSDLEG00000011362) #30 SH3PXD2B (ENSDLEG00000011382) UBTD2 (ENSDLEG00000011425) EFCAB9 (ENSDLEG00000011435) STK10 (ENSDLEG00000011442) FBXW11 (ENSDLEG00000011487) FGF18 (ENSDLEG00000011572) ENSDLEG00000011597 Vaquita MODERN SPECIES 14 ENSPSNG00000005946 THOC3 (ENSPSNG00000005986) ENSPSNG00000006028 ENSPSNG00000006253 CPLX2 (ENSPSNG00000006307) HRH2 (ENSPSNG00000006364) SFXN1 (ENSPSNG00000006445) DRD1 (ENSPSNG00000006598) MSX2 (ENSPSNG00000006615) NSG2 (ENSPSNG00000006661) ENSPSNG00000006717 C5orf47 (ENSPSNG00000006745) CPEB4 (ENSPSNG00000006810) ENSPSNG00000006924 STC2 (ENSPSNG00000006970) NKX2-5 (ENSPSNG00000007002) #22 BNIP1 (ENSPSNG00000007042) #23 CREBRF (ENSPSNG00000007099) #24 ENSPSNG00000007148 #25 RPL26L1 (ENSPSNG00000007180) ERGIC1 (ENSPSNG00000007216) #26 DUSP1 (ENSPSNG00000007271) #28 NEURL1B (ENSPSNG00000007317) #30 SH3PXD2B (ENSPSNG00000007402) UBTD2 (ENSPSNG00000007475) EFCAB9 (ENSPSNG00000007521) STK10 (ENSPSNG00000007570) ENSPSNG00000007596 FBXW11 (ENSPSNG00000007701) SMIM23 (ENSPSNG00000007767) FGF18 (ENSPSNG00000007820) Sperm whale MODERN SPECIES 11 ARL10 (ENSPCTG00005003080) KIAA1191 (ENSPCTG00005003055) SIMC1 (ENSPCTG00005003010) THOC3 (ENSPCTG00005002986) CPLX2 (ENSPCTG00005002960) HRH2 (ENSPCTG00005002944) SFXN1 (ENSPCTG00005002887) DRD1 (ENSPCTG00005002869) ENSPCTG00005002862 MSX2 (ENSPCTG00005002856) NSG2 (ENSPCTG00005002847) C5orf47 (ENSPCTG00005002836) CPEB4 (ENSPCTG00005002819) BOD1 (ENSPCTG00005002798) STC2 (ENSPCTG00005002775) NKX2-5 (ENSPCTG00005002758) #22 BNIP1 (ENSPCTG00005002731) #23 CREBRF (ENSPCTG00005002713) #24 ATP6V0E1 (ENSPCTG00005002688) #25 RPL26L1 (ENSPCTG00005002672) ERGIC1 (ENSPCTG00005002638) #26 DUSP1 (ENSPCTG00005002618) #28 NEURL1B (ENSPCTG00005002578) #30 SH3PXD2B (ENSPCTG00005002536) UBTD2 (ENSPCTG00005002517) EFCAB9 (ENSPCTG00005002503) STK10 (ENSPCTG00005002452) FBXW11 (ENSPCTG00005002420) SMIM23 (ENSPCTG00005002400) FGF18 (ENSPCTG00005002388) NPM1 (ENSPCTG00005002370) Blue whale MODERN SPECIES 14 ARL10 (ENSBMSG00010005897) ENSBMSG00010005879 ENSBMSG00010011540 THOC3 (ENSBMSG00010011525) CPLX2 (ENSBMSG00010011507) HRH2 (ENSBMSG00010011490) SFXN1 (ENSBMSG00010011469) DRD1 (ENSBMSG00010011461) MSX2 (ENSBMSG00010011455) ENSBMSG00010011445 C5orf47 (ENSBMSG00010011434) CPEB4 (ENSBMSG00010011385) ENSBMSG00010011344 STC2 (ENSBMSG00010011331) ENSBMSG00010011323 NKX2-5 (ENSBMSG00010011319) #22 ENSBMSG00010011310 ENSBMSG00010011299 BNIP1 (ENSBMSG00010011290) #23 ENSBMSG00010011277 CREBRF (ENSBMSG00010011255) #24 ENSBMSG00010011236 #25 RPL26L1 (ENSBMSG00010011223) ERGIC1 (ENSBMSG00010011201) #26 DUSP1 (ENSBMSG00010011183) #28 NEURL1B (ENSBMSG00010011096) #30 SH3PXD2B (ENSBMSG00010011059) ENSBMSG00010011045 UBTD2 (ENSBMSG00010011030) EFCAB9 (ENSBMSG00010011022) ENSBMSG00010011019 Laurasiatheria_b ANCESTRAL SPECIES 9 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b Carnivora ANCESTRAL SPECIES 8 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b Caniformia ANCESTRAL SPECIES 5 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b Caniformia_b ANCESTRAL SPECIES 4 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b Ursidae ANCESTRAL SPECIES 24 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000167072 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.b.b.b ENSGT00390000014165.d ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501.a ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 Ursus ANCESTRAL SPECIES 10 ENSGT00910000144291 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00940000167072 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.d ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501.a ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b ENSGT00940000160629 American black bear MODERN SPECIES 5284 NKX2-5 (ENSUAMG00000003029) #22 BNIP1 (ENSUAMG00000003036) #23 Giant Panda MODERN SPECIES 13 ARL10 (ENSAMEG00000006984) KIAA1191 (ENSAMEG00000006961) SIMC1 (ENSAMEG00000006950) THOC3 (ENSAMEG00000006936) CPLX2 (ENSAMEG00000006927) HRH2 (ENSAMEG00000019735) SFXN1 (ENSAMEG00000006906) DRD1 (ENSAMEG00000006899) MSX2 (ENSAMEG00000011380) NSG2 (ENSAMEG00000011368) ENSAMEG00000025521 CPEB4 (ENSAMEG00000011342) ENSAMEG00000011333 STC2 (ENSAMEG00000011326) BNIP1 (ENSAMEG00000011310) #23 NKX2-5 (ENSAMEG00000028084) #22 CREBRF (ENSAMEG00000011290) #24 ATP6V0E1 (ENSAMEG00000029545) #25 ENSAMEG00000011270 ERGIC1 (ENSAMEG00000011244) #26 DUSP1 (ENSAMEG00000011224) #28 NEURL1B (ENSAMEG00000011213) #30 SH3PXD2B (ENSAMEG00000027237) UBTD2 (ENSAMEG00000011190) ENSAMEG00000011187 STK10 (ENSAMEG00000011144) FBXW11 (ENSAMEG00000011107) SMIM23 (ENSAMEG00000027396) FGF18 (ENSAMEG00000027271) ENSAMEG00000003910 TLX3 (ENSAMEG00000003951) Mustelinae ANCESTRAL SPECIES 13 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b American mink MODERN SPECIES 101 NOP16 (ENSNVIG00000021573) ARL10 (ENSNVIG00000021589) KIAA1191 (ENSNVIG00000021600) SIMC1 (ENSNVIG00000021625) THOC3 (ENSNVIG00000021714) CPLX2 (ENSNVIG00000021719) HRH2 (ENSNVIG00000021752) SFXN1 (ENSNVIG00000021762) DRD1 (ENSNVIG00000021784) MSX2 (ENSNVIG00000021793) NSG2 (ENSNVIG00000021801) C5orf47 (ENSNVIG00000021820) CPEB4 (ENSNVIG00000021827) ENSNVIG00000021892 STC2 (ENSNVIG00000021901) NKX2-5 (ENSNVIG00000021910) #22 SEC20 (ENSNVIG00000021912) #23 CREBRF (ENSNVIG00000021945) #24 ATP6V0E1 (ENSNVIG00000021974) #25 RPL26L1 (ENSNVIG00000022013) ERGIC1 (ENSNVIG00000022026) #26 DUSP1 (ENSNVIG00000022051) #28 NEURL1B (ENSNVIG00000022058) #30 SH3PXD2B (ENSNVIG00000022076) UBTD2 (ENSNVIG00000022111) EFCAB9 (ENSNVIG00000022124) STK10 (ENSNVIG00000022143) FBXW11 (ENSNVIG00000022157) FGF18 (ENSNVIG00000022241) ENSNVIG00000022254 TLX3 (ENSNVIG00000022330) Ferret MODERN SPECIES 162 ENSMPUG00000012596 THOC3 (ENSMPUG00000012598) CPLX2 (ENSMPUG00000012600) HRH2 (ENSMPUG00000012609) ENSMPUG00000012610 SFXN1 (ENSMPUG00000012616) DRD1 (ENSMPUG00000019314) ENSMPUG00000012670 MSX2 (ENSMPUG00000012673) NSG2 (ENSMPUG00000012677) C5orf47 (ENSMPUG00000012685) CPEB4 (ENSMPUG00000012687) ENSMPUG00000012689 ENSMPUG00000012693 STC2 (ENSMPUG00000012704) NKX2-5 (ENSMPUG00000012707) #22 BNIP1 (ENSMPUG00000012710) #23 CREBRF (ENSMPUG00000012726) #24 RPL26L1 (ENSMPUG00000012729) ERGIC1 (ENSMPUG00000012743) #26 DUSP1 (ENSMPUG00000012746) #28 NEURL1B (ENSMPUG00000012751) #30 SH3PXD2B (ENSMPUG00000012754) UBTD2 (ENSMPUG00000012758) EFCAB9 (ENSMPUG00000012759) STK10 (ENSMPUG00000012761) ENSMPUG00000012767 FBXW11 (ENSMPUG00000012769) ENSMPUG00000012839 SMIM23 (ENSMPUG00000012844) FGF18 (ENSMPUG00000012855) Canidae ANCESTRAL SPECIES 7 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00390000008496.i.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.fb #25 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b ENSGT00940000160629 Canis_lupus ANCESTRAL SPECIES 12 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00390000002732.m.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00390000008496.i.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866.fb #25 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b ENSGT00940000160629 ENSGT00940000153139.B.b Dog MODERN SPECIES 32 KIAA1191 (ENSCAFG00845012621) SIMC1 (ENSCAFG00845012793) THOC3 (ENSCAFG00845012878) HRH2 (ENSCAFG00845000234) HRH2 (ENSCAFG00845000310) ENSCAFG00845000366 SFXN1 (ENSCAFG00845000413) DRD1 (ENSCAFG00845000442) MSX2 (ENSCAFG00845000450) CPEB4 (ENSCAFG00845000467) C5orf47 (ENSCAFG00845000487) CPEB4 (ENSCAFG00845000511) ENSCAFG00845000535 ENSCAFG00845000564 STC2 (ENSCAFG00845000605) NKX2-5 (ENSCAFG00845000634) #22 BNIP1 (ENSCAFG00845000706) #23 CREBRF (ENSCAFG00845000727) #24 ATP6V0E1 (ENSCAFG00845000758) #25 ERGIC1 (ENSCAFG00845000852) #26 DUSP1 (ENSCAFG00845000953) #28 NEURL1B (ENSCAFG00845000993) #30 SH3PXD2B (ENSCAFG00845001080) UBTD2 (ENSCAFG00845001180) EFCAB9 (ENSCAFG00845001213) STK10 (ENSCAFG00845001258) FBXW11 (ENSCAFG00845001422) SMIM23 (ENSCAFG00845001607) ENSCAFG00845001623 FGF18 (ENSCAFG00845001658) NPM1 (ENSCAFG00845001853) Dingo MODERN SPECIES 324 ENSCAFG00020011479 THOC3 (ENSCAFG00020011477) CPLX2 (ENSCAFG00020011467) ENSCAFG00020011464 HRH2 (ENSCAFG00020011462) SFXN1 (ENSCAFG00020011449) ENSCAFG00020011446 DRD1 (ENSCAFG00020011444) MSX2 (ENSCAFG00020011431) NSG2 (ENSCAFG00020011410) C5orf47 (ENSCAFG00020011376) CPEB4 (ENSCAFG00020011285) ENSCAFG00020011279 ENSCAFG00020011274 STC2 (ENSCAFG00020011270) NKX2-5 (ENSCAFG00020011268) #22 BNIP1 (ENSCAFG00020011264) #23 CREBRF (ENSCAFG00020011261) #24 ENSCAFG00020011259 #25 ERGIC1 (ENSCAFG00020011256) #26 DUSP1 (ENSCAFG00020011252) #28 NEURL1B (ENSCAFG00020011251) #30 SH3PXD2B (ENSCAFG00020011225) UBTD2 (ENSCAFG00020011220) STK10 (ENSCAFG00020009145) FBXW11 (ENSCAFG00020008756) FGF18 (ENSCAFG00020008729) ENSCAFG00020008713 TLX3 (ENSCAFG00020008709) ENSCAFG00020008705 RANBP17 (ENSCAFG00020005518) Red fox MODERN SPECIES 2 KIAA1191 (ENSVVUG00000001791) SIMC1 (ENSVVUG00000001816) ENSVVUG00000001834 CPLX2 (ENSVVUG00000001853) HRH2 (ENSVVUG00000001869) ENSVVUG00000001911 DRD1 (ENSVVUG00000001913) ENSVVUG00000001919 MSX2 (ENSVVUG00000001941) NSG2 (ENSVVUG00000001985) ENSVVUG00000002012 CPEB4 (ENSVVUG00000002022) ENSVVUG00000002062 ENSVVUG00000002071 STC2 (ENSVVUG00000002084) NKX2-5 (ENSVVUG00000002086) #22 BNIP1 (ENSVVUG00000002123) #23 ENSVVUG00000002168 CREBRF (ENSVVUG00000002198) #24 ATP6V0E1 (ENSVVUG00000002213) #25 ENSVVUG00000002223 ERGIC1 (ENSVVUG00000002261) #26 DUSP1 (ENSVVUG00000002297) #28 ENSVVUG00000002314 #30 SH3PXD2B (ENSVVUG00000002354) UBTD2 (ENSVVUG00000002372) EFCAB9 (ENSVVUG00000002399) STK10 (ENSVVUG00000002418) FBXW11 (ENSVVUG00000002484) SMIM23 (ENSVVUG00000002597) FGF18 (ENSVVUG00000002630) Felidae ANCESTRAL SPECIES 6 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b Panthera ANCESTRAL SPECIES 6 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b Tiger MODERN SPECIES 175 ENSPTIG00000013371 GEM (ENSPTIG00000016878) CDH17 (ENSPTIG00000017434) PDP1 (ENSPTIG00000018605) TMEM67 (ENSPTIG00000019697) RBM12B (ENSPTIG00000020071) CIBAR1 (ENSPTIG00000021531) TRIQK (ENSPTIG00000009851) ENSPTIG00000007336 ENSPTIG00000013341 ENSPTIG00000014067 ENSPTIG00000014905 CPEB4 (ENSPTIG00000015408) ENSPTIG00000017876 STC2 (ENSPTIG00000020657) NKX2-5 (ENSPTIG00000021046) #22 BNIP1 (ENSPTIG00000021237) #23 CREBRF (ENSPTIG00000000444) #24 ATP6V0E1 (ENSPTIG00000005140) #25 RPL26L1 (ENSPTIG00000007028) ERGIC1 (ENSPTIG00000008508) #26 Panthera_a ANCESTRAL SPECIES 3 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b lion MODERN SPECIES NOP16 (ENSPLOG00000015130) ARL10 (ENSPLOG00000015082) KIAA1191 (ENSPLOG00000015041) ENSPLOG00000014896 THOC3 (ENSPLOG00000014809) CPLX2 (ENSPLOG00000014736) HRH2 (ENSPLOG00000014696) SFXN1 (ENSPLOG00000014636) DRD1 (ENSPLOG00000014615) MSX2 (ENSPLOG00000014575) NSG2 (ENSPLOG00000014484) C5orf47 (ENSPLOG00000014426) CPEB4 (ENSPLOG00000014177) ENSPLOG00000014087 STC2 (ENSPLOG00000014037) NKX2-5 (ENSPLOG00000014000) #22 BNIP1 (ENSPLOG00000013932) #23 CREBRF (ENSPLOG00000013863) #24 ATP6V0E1 (ENSPLOG00000013764) #25 RPL26L1 (ENSPLOG00000013719) ERGIC1 (ENSPLOG00000013645) #26 DUSP1 (ENSPLOG00000013584) #28 NEURL1B (ENSPLOG00000013404) #30 SH3PXD2B (ENSPLOG00000013192) UBTD2 (ENSPLOG00000013141) EFCAB9 (ENSPLOG00000013080) STK10 (ENSPLOG00000013044) FBXW11 (ENSPLOG00000012707) FGF18 (ENSPLOG00000012527) ENSPLOG00000012460 TLX3 (ENSPLOG00000012406) leopard MODERN SPECIES 18 ENSPPRG00000015618 NOP16 (ENSPPRG00000016600) ARL10 (ENSPPRG00000017068) KIAA1191 (ENSPPRG00000017956) ENSPPRG00000020005 THOC3 (ENSPPRG00000020316) CPLX2 (ENSPPRG00000024229) HRH2 (ENSPPRG00000023957) SFXN1 (ENSPPRG00000023613) DRD1 (ENSPPRG00000019529) MSX2 (ENSPPRG00000023106) NSG2 (ENSPPRG00000000307) CPEB4 (ENSPPRG00000001603) ENSPPRG00000003207 STC2 (ENSPPRG00000003601) NKX2-5 (ENSPPRG00000004094) #22 BNIP1 (ENSPPRG00000005455) #23 CREBRF (ENSPPRG00000005970) #24 ATP6V0E1 (ENSPPRG00000006470) #25 RPL26L1 (ENSPPRG00000006918) ERGIC1 (ENSPPRG00000008276) #26 DUSP1 (ENSPPRG00000008559) #28 NEURL1B (ENSPPRG00000009165) #30 SH3PXD2B (ENSPPRG00000009689) UBTD2 (ENSPPRG00000010187) EFCAB9 (ENSPPRG00000011345) STK10 (ENSPPRG00000011731) FBXW11 (ENSPPRG00000012730) SMIM23 (ENSPPRG00000013401) FGF18 (ENSPPRG00000013778) ENSPPRG00000014990 Cat MODERN SPECIES ARL10 (ENSFCAG00000042295) KIAA1191 (ENSFCAG00000007189) SIMC1 (ENSFCAG00000023224) ENSFCAG00000044857 CPLX2 (ENSFCAG00000036578) HRH2 (ENSFCAG00000024815) SFXN1 (ENSFCAG00000015407) DRD1 (ENSFCAG00000000764) ENSFCAG00000025391 MSX2 (ENSFCAG00000033871) NSG2 (ENSFCAG00000022137) ENSFCAG00000041207 CPEB4 (ENSFCAG00000031504) ENSFCAG00000021908 STC2 (ENSFCAG00000046627) NKX2-5 (ENSFCAG00000000539) #22 BNIP1 (ENSFCAG00000000536) #23 CREBRF (ENSFCAG00000000534) #24 ATP6V0E1 (ENSFCAG00000031789) #25 RPL26L1 (ENSFCAG00000026949) ERGIC1 (ENSFCAG00000011258) #26 DUSP1 (ENSFCAG00000037697) #28 NEURL1B (ENSFCAG00000031157) #30 SH3PXD2B (ENSFCAG00000038295) UBTD2 (ENSFCAG00000044346) EFCAB9 (ENSFCAG00000016235) STK10 (ENSFCAG00000000434) FBXW11 (ENSFCAG00000027834) SMIM23 (ENSFCAG00000044613) FGF18 (ENSFCAG00000007079) NPM1 (ENSFCAG00000030268) Laurasiatheria_c ANCESTRAL SPECIES 7 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b ENSGT00940000160629 Chiroptera ANCESTRAL SPECIES 1 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b ENSGT00940000160629 Microchiroptera ANCESTRAL SPECIES 3 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00940000159553 ENSGT00940000153052.c.b.a.b ENSGT00940000160629 Greater horseshoe bat MODERN SPECIES 16 TMEM130 (ENSRFEG00010008383) ARL10 (ENSRFEG00010008335) KIAA1191 (ENSRFEG00010008281) SIMC1 (ENSRFEG00010008176) THOC3 (ENSRFEG00010008126) CPLX2 (ENSRFEG00010008067) HRH2 (ENSRFEG00010008040) SFXN1 (ENSRFEG00010007993) DRD1 (ENSRFEG00010007981) MSX2 (ENSRFEG00010007947) NSG2 (ENSRFEG00010007915) C5orf47 (ENSRFEG00010007860) CPEB4 (ENSRFEG00010007464) ENSRFEG00010007368 STC2 (ENSRFEG00010007301) NKX2-5 (ENSRFEG00010007273) #22 BNIP1 (ENSRFEG00010007189) #23 CREBRF (ENSRFEG00010007123) #24 ENSRFEG00010007076 #25 RPL26L1 (ENSRFEG00010007037) ERGIC1 (ENSRFEG00010006938) #26 DUSP1 (ENSRFEG00010006882) #28 NEURL1B (ENSRFEG00010006802) #30 SH3PXD2B (ENSRFEG00010006731) UBTD2 (ENSRFEG00010006696) EFCAB9 (ENSRFEG00010006675) STK10 (ENSRFEG00010006622) FBXW11 (ENSRFEG00010006429) FGF18 (ENSRFEG00010006277) ENSRFEG00010006113 TLX3 (ENSRFEG00010005948) Megabat MODERN SPECIES 4167 STC2 (ENSPVAG00000003244) NKX2-5 (ENSPVAG00000003246) #22 BNIP1 (ENSPVAG00000003247) #23 CREBRF (ENSPVAG00000003249) #24 ATP6V0E1 (ENSPVAG00000003251) #25 RPL26L1 (ENSPVAG00000003253) ERGIC1 (ENSPVAG00000003254) #26 DUSP1 (ENSPVAG00000003258) #28 NEURL1B (ENSPVAG00000003260) #30 Equus ANCESTRAL SPECIES 6 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00640000091672 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00950000183120.e.b.a.a.b.b.a.b ENSGT00940000159553 Horse MODERN SPECIES 5 ENSECAG00000020914 ARL10 (ENSECAG00000029432) SIMC1 (ENSECAG00000009246) KIAA1191 (ENSECAG00000003238) THOC3 (ENSECAG00000011555) CPLX2 (ENSECAG00000014632) HRH2 (ENSECAG00000016581) SFXN1 (ENSECAG00000018755) DRD1 (ENSECAG00000011620) MSX2 (ENSECAG00000011749) NSG2 (ENSECAG00000013801) C14H5orf47 (ENSECAG00000015624) CPEB4 (ENSECAG00000016921) ENSECAG00000021784 STC2 (ENSECAG00000022263) NKX2-5 (ENSECAG00000023495) #22 BNIP1 (ENSECAG00000023543) #23 CREBRF (ENSECAG00000024559) #24 RPL26L1 (ENSECAG00000000869) #25 ENSECAG00000059561 ERGIC1 (ENSECAG00000007541) #26 DUSP1 (ENSECAG00000009958) #28 NEURL1B (ENSECAG00000039619) #30 SH3PXD2B (ENSECAG00000009968) UBTD2 (ENSECAG00000038912) EFCAB9 (ENSECAG00000015586) STK10 (ENSECAG00000016265) FBXW11 (ENSECAG00000011756) SMIM23 (ENSECAG00000018524) ENSECAG00000049830 ENSECAG00000003655 Donkey MODERN SPECIES 29 ENSEASG00005032426 NOP16 (ENSEASG00005011988) ARL10 (ENSEASG00005030196) KIAA1191 (ENSEASG00005011978) SIMC1 (ENSEASG00005011973) THOC3 (ENSEASG00005011970) CPLX2 (ENSEASG00005011968) HRH2 (ENSEASG00005011967) SFXN1 (ENSEASG00005011962) DRD1 (ENSEASG00005026731) MSX2 (ENSEASG00005036074) ENSEASG00005025007 CPEB4 (ENSEASG00005011952) ENSEASG00005011948 STC2 (ENSEASG00005024262) NKX2-5 (ENSEASG00005011942) #22 BNIP1 (ENSEASG00005027404) #23 CREBRF (ENSEASG00005011938) #24 ATP6V0E1 (ENSEASG00005011936) #25 RPL26L1 (ENSEASG00005011935) ERGIC1 (ENSEASG00005011934) #26 DUSP1 (ENSEASG00005011932) #28 NEURL1B (ENSEASG00005028285) #30 SH3PXD2B (ENSEASG00005011927) UBTD2 (ENSEASG00005028770) EFCAB9 (ENSEASG00005011925) STK10 (ENSEASG00005011922) FBXW11 (ENSEASG00005011915) SMIM23 (ENSEASG00005024362) ENSEASG00005011908 FGF18 (ENSEASG00005033570) Eulipotyphla ANCESTRAL SPECIES ENSGT00940000158996 #22 Common shrew MODERN SPECIES 9876 NKX2-5 (ENSSARG00000002300) #22 Atlantogenata ANCESTRAL SPECIES ENSGT00910000144291 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.d ENSGT00940000160629 Afrotheria ANCESTRAL SPECIES 7 ENSGT00910000144291 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.d ENSGT00940000160629 Tenrec MODERN SPECIES 16410 NKX2-5 (ENSETEG00000014039) #22 Afrotheria_a ANCESTRAL SPECIES 7 ENSGT00910000144291 ENSGT00390000003426 ENSGT00940000160017 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.a ENSGT00940000158761 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00390000014165.c.b ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.d ENSGT00940000160629 Elephant MODERN SPECIES 2 ENSLAFG00000028186 NOP16 (ENSLAFG00000017886) ARL10 (ENSLAFG00000017880) KIAA1191 (ENSLAFG00000028878) SIMC1 (ENSLAFG00000017874) THOC3 (ENSLAFG00000016609) CPLX2 (ENSLAFG00000020627) HRH2 (ENSLAFG00000004764) SFXN1 (ENSLAFG00000002243) DRD1 (ENSLAFG00000010433) MSX2 (ENSLAFG00000001916) NSG2 (ENSLAFG00000028103) CPEB4 (ENSLAFG00000016030) ENSLAFG00000003066 STC2 (ENSLAFG00000006193) NKX2-5 (ENSLAFG00000029311) #22 ENSLAFG00000027511 #23 CREBRF (ENSLAFG00000013690) #24 RPL26L1 (ENSLAFG00000006797) ERGIC1 (ENSLAFG00000006791) #26 DUSP1 (ENSLAFG00000007743) #28 NEURL1B (ENSLAFG00000020677) #30 ENSLAFG00000029644 SH3PXD2B (ENSLAFG00000016210) UBTD2 (ENSLAFG00000011441) EFCAB9 (ENSLAFG00000020630) ENSLAFG00000023319 FBXW11 (ENSLAFG00000006465) SMIM23 (ENSLAFG00000007608) FGF18 (ENSLAFG00000021964) ENSLAFG00000007677 Hyrax MODERN SPECIES 8450 NKX2-5 (ENSPCAG00000013736) #22 Xenarthra ANCESTRAL SPECIES ENSGT00940000158996 #22 Armadillo MODERN SPECIES 290 NKX2-5 (ENSDNOG00000015890) #22 Marsupialia ANCESTRAL SPECIES 9 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a ENSGT00390000005589.a.b ENSGT00390000011206.b ENSGT00940000160854 ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 ENSGT00940000153052.b.a Opossum MODERN SPECIES AFAP1L1 (ENSMODG00000005760) GRPEL2 (ENSMODG00000005775) ENSMODG00000040849 PCYOX1L (ENSMODG00000005809) IL17B (ENSMODG00000005817) JAKMIP2 (ENSMODG00000005857) ENSMODG00000005887 DRD1 (ENSMODG00000023683) ENSMODG00000040970 MSX2 (ENSMODG00000005933) ENSMODG00000023086 ENSMODG00000006007 CPEB4 (ENSMODG00000006036) ENSMODG00000006047 STC2 (ENSMODG00000006146) NKX2-5 (ENSMODG00000006154) #22 BNIP1 (ENSMODG00000044680) #23 CREBRF (ENSMODG00000006184) #24 ATP6V0E1 (ENSMODG00000044657) #25 ENSMODG00000006201 ERGIC1 (ENSMODG00000006214) #26 DUSP1 (ENSMODG00000050204) #28 NEURL1B (ENSMODG00000006234) #30 SH3PXD2B (ENSMODG00000006308) UBTD2 (ENSMODG00000006341) EFCAB9 (ENSMODG00000006348) ENSMODG00000006392 STK10 (ENSMODG00000006383) ENSMODG00000006398 FBXW11 (ENSMODG00000006464) ENSMODG00000040419 Marsupialia_b ANCESTRAL SPECIES 5 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b.f ENSGT00950000182850.a.b.a.b.b.e ENSGT00950000183067.a.b.a ENSGT00390000005589.a.b ENSGT00390000011206.b ENSGT00940000160854 ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00390000002856 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 Diprotodontia ANCESTRAL SPECIES 4 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b.f ENSGT00950000182850.a.b.a.b.b.e ENSGT00950000183067.a.b.a ENSGT00390000005589.a.b ENSGT00390000011206.b ENSGT00940000160854 ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00390000002856 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 ENSGT00940000159553 Wallaby MODERN SPECIES 14510 ENSMEUG00000011672 #22 Diprotodontia_a ANCESTRAL SPECIES 5 ENSGT00950000182850.a.b.a.b.b.f ENSGT00950000182850.a.b.a.b.b.e ENSGT00950000183067.a.b.a ENSGT00390000005589.a.b ENSGT00390000011206.b ENSGT00940000160854 ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00940000154576.d ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00390000002856 ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000168748.a.a ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156641 ENSGT00390000007501 ENSGT00940000156818 ENSGT00940000155898 ENSGT00390000017300 Common wonbat MODERN SPECIES 1087 SH3TC2 (ENSVURG00010000134) ENSVURG00010000169 AFAP1L1 (ENSVURG00010000196) GRPEL2 (ENSVURG00010000242) PCYOX1L (ENSVURG00010000251) IL17B (ENSVURG00010000264) JAKMIP2 (ENSVURG00010000289) SFXN1 (ENSVURG00010000324) DRD1 (ENSVURG00010000352) MSX2 (ENSVURG00010000371) NSG2 (ENSVURG00010000391) CPEB4 (ENSVURG00010000453) ENSVURG00010000764 ENSVURG00010000781 STC2 (ENSVURG00010000867) ENSVURG00010000877 #22 BNIP1 (ENSVURG00010000889) #23 ENSVURG00010000900 CREBRF (ENSVURG00010000924) #24 ATP6V0E1 (ENSVURG00010000934) #25 ENSVURG00010000947 ERGIC1 (ENSVURG00010000991) #26 DUSP1 (ENSVURG00010001003) #28 NEURL1B (ENSVURG00010001019) #30 ENSVURG00010001025 SH3PXD2B (ENSVURG00010001083) UBTD2 (ENSVURG00010001111) EFCAB9 (ENSVURG00010001123) STK10 (ENSVURG00010001138) FBXW11 (ENSVURG00010001229) FGF18 (ENSVURG00010001447) koala MODERN SPECIES 189 AFAP1L1 (ENSPCIG00000030220) GRPEL2 (ENSPCIG00000030218) PCYOX1L (ENSPCIG00000016832) IL17B (ENSPCIG00000016831) JAKMIP2 (ENSPCIG00000006340) SFXN1 (ENSPCIG00000014031) DRD1 (ENSPCIG00000014024) ENSPCIG00000009006 MSX2 (ENSPCIG00000010374) ENSPCIG00000028337 NSG2 (ENSPCIG00000020950) CPEB4 (ENSPCIG00000015843) ENSPCIG00000005513 ENSPCIG00000005521 STC2 (ENSPCIG00000024498) NKX2-5 (ENSPCIG00000024493) #22 BNIP1 (ENSPCIG00000024492) #23 CREBRF (ENSPCIG00000024487) #24 ATP6V0E1 (ENSPCIG00000024485) #25 ERGIC1 (ENSPCIG00000013566) #26 DUSP1 (ENSPCIG00000013569) #28 ENSPCIG00000013571 NEURL1B (ENSPCIG00000013574) #30 Tasmanian devil MODERN SPECIES 1 ADRB2 (ENSSHAG00000012084) SH3TC2 (ENSSHAG00000011495) ABLIM3 (ENSSHAG00000010285) AFAP1L1 (ENSSHAG00000009663) GRPEL2 (ENSSHAG00000009365) PCYOX1L (ENSSHAG00000031829) ENSSHAG00000009123 ENSSHAG00000007136 ENSSHAG00000027708 DRD1 (ENSSHAG00000024944) MSX2 (ENSSHAG00000024059) NSG2 (ENSSHAG00000026505) CPEB4 (ENSSHAG00000025977) ENSSHAG00000027063 STC2 (ENSSHAG00000025128) NKX2-5 (ENSSHAG00000008877) #22 BNIP1 (ENSSHAG00000028003) #23 CREBRF (ENSSHAG00000007714) #24 ATP6V0E1 (ENSSHAG00000029538) #25 ENSSHAG00000028181 ERGIC1 (ENSSHAG00000004451) #26 DUSP1 (ENSSHAG00000002204) #28 ENSSHAG00000025417 NEURL1B (ENSSHAG00000002600) #30 SH3PXD2B (ENSSHAG00000027120) EFCAB9 (ENSSHAG00000022167) UBTD2 (ENSSHAG00000024875) STK10 (ENSSHAG00000012835) FBXW11 (ENSSHAG00000012435) ENSSHAG00000011730 FGF18 (ENSSHAG00000031040) Platypus MODERN SPECIES 84 GRXCR2 (ENSOANG00000050122) SH3RF2 (ENSOANG00000005754) ENSOANG00000032054 LARS1 (ENSOANG00000005755) RBM27 (ENSOANG00000012563) ENSOANG00000008710 DPYSL3 (ENSOANG00000012564) JAKMIP2 (ENSOANG00000012565) SFXN1 (ENSOANG00000049587) DRD1 (ENSOANG00000015988) MSX2 (ENSOANG00000038291) NSG2 (ENSOANG00000014066) CPEB4 (ENSOANG00000047376) ENSOANG00000045637 STC2 (ENSOANG00000041282) NKX2-5 (ENSOANG00000037400) #22 BNIP1 (ENSOANG00000046862) #23 CREBRF (ENSOANG00000003984) #24 ENSOANG00000021011 ENSOANG00000022022 ERGIC1 (ENSOANG00000040410) #26 DUSP1 (ENSOANG00000040425) #28 NEURL1B (ENSOANG00000014559) #30 SH3PXD2B (ENSOANG00000040007) STK10 (ENSOANG00000010949) ENSOANG00000039699 UBTD2 (ENSOANG00000006605) TBC1D9B (ENSOANG00000004120) RNF130 (ENSOANG00000020588) FLT4 (ENSOANG00000001739) ENSOANG00000004351 Sauria ANCESTRAL SPECIES 17 ENSGT00510000046929.b ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a Archelosauria ANCESTRAL SPECIES 15 ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00960000189397 ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a Cryptodira ANCESTRAL SPECIES 15 ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00960000189397 ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a Testudinoidea ANCESTRAL SPECIES 5 ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00960000189397 ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a Emydidae ANCESTRAL SPECIES 11 ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00960000189397 ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a Three-toed box turtle MODERN SPECIES 306 POU4F3 (ENSTMTG00000016791) TCERG1 (ENSTMTG00000016641) GPR151 (ENSTMTG00000016627) PPP2R2B (ENSTMTG00000016580) ENSTMTG00000016562 STK32A (ENSTMTG00000016542) DPYSL3 (ENSTMTG00000016524) JAKMIP2 (ENSTMTG00000016252) SFXN1 (ENSTMTG00000016177) DRD1 (ENSTMTG00000016164) MSX2 (ENSTMTG00000016146) NSG2 (ENSTMTG00000016123) CPEB4 (ENSTMTG00000016106) ENSTMTG00000016098 STC2 (ENSTMTG00000016072) NKX2-5 (ENSTMTG00000016062) #22 BNIP1 (ENSTMTG00000016046) #23 CREBRF (ENSTMTG00000016023) #24 ATP6V0E1 (ENSTMTG00000016014) #25 RPL26 (ENSTMTG00000016009) ERGIC1 (ENSTMTG00000015990) #26 painted turtle MODERN SPECIES 2385 ENSCPBG00000007451 JAKMIP2 (ENSCPBG00000007471) ENSCPBG00000007495 SFXN1 (ENSCPBG00000007501) DRD1 (ENSCPBG00000007519) MSX2 (ENSCPBG00000007524) NSG2 (ENSCPBG00000007528) CPEB4 (ENSCPBG00000007535) ENSCPBG00000007551 STC2 (ENSCPBG00000007560) NKX2-5 (ENSCPBG00000007563) #22 BNIP1 (ENSCPBG00000007566) #23 CREBRF (ENSCPBG00000007577) #24 ATP6V0E1 (ENSCPBG00000007589) #25 RPL26 (ENSCPBG00000007593) ERGIC1 (ENSCPBG00000007601) #26 ENSCPBG00000007606 DUSP1 (ENSCPBG00000007611) #28 NEURL1B (ENSCPBG00000007630) #30 SH3PXD2B (ENSCPBG00000007639) STK10 (ENSCPBG00000007660) EFCAB9 (ENSCPBG00000007673) UBTD2 (ENSCPBG00000007679) ADRB2 (ENSCPBG00000007688) SH3TC2 (ENSCPBG00000007700) ABLIM3 (ENSCPBG00000007739) Testudinidae ANCESTRAL SPECIES 16 ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00960000189397 ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a Goode s thornscrub tortoise MODERN SPECIES 22 POU4F3 (ENSGEVG00005007692) TCERG1 (ENSGEVG00005007732) GPR151 (ENSGEVG00005007825) PPP2R2B (ENSGEVG00005007863) ENSGEVG00005007956 STK32A (ENSGEVG00005008055) DPYSL3 (ENSGEVG00005008376) JAKMIP2 (ENSGEVG00005008675) SFXN1 (ENSGEVG00005008741) DRD1 (ENSGEVG00005008773) MSX2 (ENSGEVG00005008781) NSG2 (ENSGEVG00005008810) CPEB4 (ENSGEVG00005008855) ENSGEVG00005008890 STC2 (ENSGEVG00005009015) NKX2-5 (ENSGEVG00005009080) #22 BNIP1 (ENSGEVG00005009102) #23 CREBRF (ENSGEVG00005009119) #24 ATP6V0E1 (ENSGEVG00005009147) #25 RPL26 (ENSGEVG00005009170) ERGIC1 (ENSGEVG00005009233) #26 DUSP1 (ENSGEVG00005009360) #28 NEURL1B (ENSGEVG00005009384) #30 ENSGEVG00005009402 ENSGEVG00005009428 STK10 (ENSGEVG00005009569) EFCAB9 (ENSGEVG00005009608) UBTD2 (ENSGEVG00005009650) ADRB2 (ENSGEVG00005009673) SH3TC2 (ENSGEVG00005009752) ENSGEVG00005009824 Abingdon island giant tortoise MODERN SPECIES 2182 RBM27 (ENSCABG00000013726) POU4F3 (ENSCABG00000013834) TCERG1 (ENSCABG00000013840) GPR151 (ENSCABG00000013856) PPP2R2B (ENSCABG00000013861) STK32A (ENSCABG00000013883) DPYSL3 (ENSCABG00000013893) JAKMIP2 (ENSCABG00000014001) SFXN1 (ENSCABG00000014092) DRD1 (ENSCABG00000014096) MSX2 (ENSCABG00000014103) NSG2 (ENSCABG00000014111) CPEB4 (ENSCABG00000014114) ENSCABG00000014117 STC2 (ENSCABG00000014121) NKX2-5 (ENSCABG00000014122) #22 BNIP1 (ENSCABG00000014124) #23 CREBRF (ENSCABG00000014125) #24 ATP6V0E1 (ENSCABG00000014145) #25 RPL26 (ENSCABG00000014147) ERGIC1 (ENSCABG00000014150) #26 DUSP1 (ENSCABG00000014155) #28 NEURL1B (ENSCABG00000014167) #30 ENSCABG00000014173 ENSCABG00000014175 STK10 (ENSCABG00000014196) EFCAB9 (ENSCABG00000014578) UBTD2 (ENSCABG00000014580) Chinese turtle MODERN SPECIES 2220 STC2 (ENSPSIG00000015246) NKX2-5 (ENSPSIG00000014981) #22 BNIP1 (ENSPSIG00000014624) #23 CREBRF (ENSPSIG00000013820) #24 ATP6V0E1 (ENSPSIG00000013593) #25 RPL26 (ENSPSIG00000013153) ERGIC1 (ENSPSIG00000011786) #26 DUSP1 (ENSPSIG00000011093) #28 NEURL1B (ENSPSIG00000010315) #30 SH3PXD2B (ENSPSIG00000010303) STK10 (ENSPSIG00000009241) EFCAB9 (ENSPSIG00000009216) UBTD2 (ENSPSIG00000009210) ADRB2 (ENSPSIG00000008710) SH3TC2 (ENSPSIG00000007989) ABLIM3 (ENSPSIG00000006198) AFAP1L1 (ENSPSIG00000015614) Archosauria ANCESTRAL SPECIES 17 ENSGT00510000046929.b ENSGT00940000160880 ENSGT00940000157770 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00960000189397 ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a Australian saltwater crocodile MODERN SPECIES 34 LARS1 (ENSCPRG00005008167) RBM27 (ENSCPRG00005008156) POU4F3 (ENSCPRG00005008153) TCERG1 (ENSCPRG00005008131) PPP2R2B (ENSCPRG00005008119) STK32A (ENSCPRG00005008085) DPYSL3 (ENSCPRG00005008055) JAKMIP2 (ENSCPRG00005008002) SFXN1 (ENSCPRG00005007987) DRD1 (ENSCPRG00005007982) MSX2 (ENSCPRG00005007971) NSG2 (ENSCPRG00005007959) CPEB4 (ENSCPRG00005007956) ENSCPRG00005007939 STC2 (ENSCPRG00005007937) NKX2-5 (ENSCPRG00005007932) #22 BNIP1 (ENSCPRG00005007919) #23 CREBRF (ENSCPRG00005007915) #24 ATP6V0E1 (ENSCPRG00005007904) #25 RPL26 (ENSCPRG00005007902) ERGIC1 (ENSCPRG00005007890) #26 DUSP1 (ENSCPRG00005007884) #28 NEURL1B (ENSCPRG00005007875) #30 SH3PXD2B (ENSCPRG00005007836) STK10 (ENSCPRG00005007810) EFCAB9 (ENSCPRG00005007806) UBTD2 (ENSCPRG00005007804) ADRB2 (ENSCPRG00005007778) SH3TC2 (ENSCPRG00005007768) ABLIM3 (ENSCPRG00005007745) AFAP1L1 (ENSCPRG00005007715) Aves ANCESTRAL SPECIES 15 ENSGT00940000161364 ENSGT00940000164577 ENSGT00940000158355 ENSGT00940000157712 ENSGT00940000158603 ENSGT00550000074939 ENSGT00530000064262 ENSGT00940000156931 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a ENSGT00390000005589.a.b Neognathae ANCESTRAL SPECIES 14 ENSGT00940000164577 ENSGT00940000158355 ENSGT00940000157712 ENSGT00940000158603 ENSGT00550000074939 ENSGT00530000064262 ENSGT00940000156931 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00960000189351 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a ENSGT00390000005589.a.b Neognathae_b ANCESTRAL SPECIES 16 ENSGT00940000164577 ENSGT00940000158355 ENSGT00940000157712 ENSGT00940000158603 ENSGT00550000074939 ENSGT00530000064262 ENSGT00940000156931 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00960000189351 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a ENSGT00390000005589.a.b Neognathae_c ANCESTRAL SPECIES 19 ENSGT00940000161364 ENSGT00940000164577 ENSGT00940000158355 ENSGT00940000157712 ENSGT00940000158603 ENSGT00550000074939 ENSGT00530000064262 ENSGT00940000156931 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a ENSGT00390000005589.a.b ENSGT00390000011206.b Kakapo MODERN SPECIES 6 ENSSHBG00005016051 LMAN2 (ENSSHBG00005016058) B4GALT7 (ENSSHBG00005016061) N4BP3 (ENSSHBG00005016066) NHP2 (ENSSHBG00005016071) ENSSHBG00005016079 BRD8 (ENSSHBG00005016089) KIF20A (ENSSHBG00005016103) SFXN1 (ENSSHBG00005016111) DRD1 (ENSSHBG00005016119) MSX2 (ENSSHBG00005016120) NSG2 (ENSSHBG00005016125) CPEB4 (ENSSHBG00005016128) ENSSHBG00005016151 STC2 (ENSSHBG00005016156) NKX2-5 (ENSSHBG00005016162) #22 BNIP1 (ENSSHBG00005016165) #23 CREBRF (ENSSHBG00005016175) #24 RPL26 (ENSSHBG00005016182) ERGIC1 (ENSSHBG00005016189) #26 DUSP1 (ENSSHBG00005016192) #28 NEURL1B (ENSSHBG00005016201) #30 SH3PXD2B (ENSSHBG00005016219) STK10 (ENSSHBG00005016343) UBTD2 (ENSSHBG00005017971) ADRB2 (ENSSHBG00005017975) SH3TC2 (ENSSHBG00005017984) ABLIM3 (ENSSHBG00005018000) AFAP1L1 (ENSSHBG00005018003) GRPEL2 (ENSSHBG00005018006) PCYOX1L (ENSSHBG00005018008) Golden eagle MODERN SPECIES 14 ENSACCG00020013259 LMAN2 (ENSACCG00020013237) B4GALT7 (ENSACCG00020013211) N4BP3 (ENSACCG00020013192) NHP2 (ENSACCG00020013180) ENSACCG00020013163 BRD8 (ENSACCG00020013116) KIF20A (ENSACCG00020013060) SFXN1 (ENSACCG00020013026) DRD1 (ENSACCG00020013006) MSX2 (ENSACCG00020012994) NSG2 (ENSACCG00020012980) CPEB4 (ENSACCG00020012959) ENSACCG00020012917 STC2 (ENSACCG00020012896) NKX2-5 (ENSACCG00020012874) #22 BNIP1 (ENSACCG00020012856) #23 CREBRF (ENSACCG00020012815) #24 RPL26 (ENSACCG00020012774) ERGIC1 (ENSACCG00020012710) #26 ENSACCG00020012686 DUSP1 (ENSACCG00020012672) #28 NEURL1B (ENSACCG00020012648) #30 SH3PXD2B (ENSACCG00020012626) STK10 (ENSACCG00020012579) UBTD2 (ENSACCG00020012552) ADRB2 (ENSACCG00020012531) SH3TC2 (ENSACCG00020012431) ABLIM3 (ENSACCG00020012238) AFAP1L1 (ENSACCG00020012061) GRPEL2 (ENSACCG00020011972) Passeriformes ANCESTRAL SPECIES 14 ENSGT00940000164577 ENSGT00940000158355 ENSGT00940000157712 ENSGT00940000158603 ENSGT00550000074939 ENSGT00530000064262 ENSGT00940000156931 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00960000189351 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a ENSGT00390000005589.a.b Great tit MODERN SPECIES 4 LMAN2 (ENSPMJG00000006590) B4GALT7 (ENSPMJG00000006588) N4BP3 (ENSPMJG00000006587) ENSPMJG00000006586 BRD8 (ENSPMJG00000006568) ENSPMJG00000006566 KIF20A (ENSPMJG00000006560) SFXN1 (ENSPMJG00000006556) DRD1 (ENSPMJG00000006555) MSX2 (ENSPMJG00000006547) NSG2 (ENSPMJG00000006538) ENSPMJG00000006535 CPEB4 (ENSPMJG00000006528) ENSPMJG00000006523 STC2 (ENSPMJG00000006490) NKX2-5 (ENSPMJG00000006487) #22 BNIP1 (ENSPMJG00000006485) #23 CREBRF (ENSPMJG00000006480) #24 RPL26 (ENSPMJG00000006464) ERGIC1 (ENSPMJG00000006461) #26 DUSP1 (ENSPMJG00000006458) #28 NEURL1B (ENSPMJG00000006456) #30 SH3PXD2B (ENSPMJG00000006447) STK10 (ENSPMJG00000006445) UBTD2 (ENSPMJG00000006444) ADRB2 (ENSPMJG00000006425) SH3TC2 (ENSPMJG00000006424) ABLIM3 (ENSPMJG00000006419) AFAP1L1 (ENSPMJG00000006405) GRPEL2 (ENSPMJG00000006401) PCYOX1L (ENSPMJG00000006393) Passeriformes_d ANCESTRAL SPECIES 15 ENSGT00940000164577 ENSGT00940000158355 ENSGT00940000157712 ENSGT00940000158603 ENSGT00550000074939 ENSGT00530000064262 ENSGT00940000156931 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT01040000244634 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a ENSGT00390000005589.a.b Flycatcher MODERN SPECIES 4 ENSFALG00000008757 LMAN2 (ENSFALG00000008760) B4GALT7 (ENSFALG00000008765) ENSFALG00000008770 NHP2 (ENSFALG00000022995) ENSFALG00000008777 ENSFALG00000008790 SFXN1 (ENSFALG00000008804) DRD1 (ENSFALG00000014407) ENSFALG00000028772 MSX2 (ENSFALG00000014415) NSG2 (ENSFALG00000027426) CPEB4 (ENSFALG00000008809) ENSFALG00000008811 STC2 (ENSFALG00000025551) NKX2-5 (ENSFALG00000008813) #22 ENSFALG00000008815 CREBRF (ENSFALG00000008816) #24 ATP6V0E1 (ENSFALG00000008817) #25 ENSFALG00000008818 ERGIC1 (ENSFALG00000008820) #26 DUSP1 (ENSFALG00000008823) #28 ENSFALG00000008824 #30 SH3PXD2B (ENSFALG00000008827) ENSFALG00000008830 ENSFALG00000008833 ADRB2 (ENSFALG00000014433) SH3TC2 (ENSFALG00000008835) ABLIM3 (ENSFALG00000008837) AFAP1L1 (ENSFALG00000008840) GRPEL2 (ENSFALG00000008841) Passeriformes_g ANCESTRAL SPECIES 15 ENSGT00940000164577 ENSGT00940000158355 ENSGT00940000157712 ENSGT00940000158603 ENSGT00550000074939 ENSGT00530000064262 ENSGT00940000156931 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT01040000244634 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a ENSGT00390000005589.a.b Medium ground finch MODERN SPECIES 11 ENSGFOG00000006724 LMAN2 (ENSGFOG00000006778) B4GALT7 (ENSGFOG00000006792) N4BP3 (ENSGFOG00000006801) NHP2 (ENSGFOG00000006854) BRD8 (ENSGFOG00000006877) KIF20A (ENSGFOG00000006909) SFXN1 (ENSGFOG00000006922) DRD1 (ENSGFOG00000006934) ENSGFOG00000006940 MSX2 (ENSGFOG00000006943) ENSGFOG00000006950 NSG2 (ENSGFOG00000006955) CPEB4 (ENSGFOG00000006967) STC2 (ENSGFOG00000006981) NKX2-5 (ENSGFOG00000006986) #22 BNIP1 (ENSGFOG00000006991) #23 CREBRF (ENSGFOG00000006997) #24 ATP6V0E1 (ENSGFOG00000007006) #25 RPL26 (ENSGFOG00000007011) ERGIC1 (ENSGFOG00000007022) #26 DUSP1 (ENSGFOG00000007032) #28 NEURL1B (ENSGFOG00000007039) #30 SH3PXD2B (ENSGFOG00000007045) STK10 (ENSGFOG00000007164) UBTD2 (ENSGFOG00000010545) ADRB2 (ENSGFOG00000010549) ENSGFOG00000010556 ABLIM3 (ENSGFOG00000010564) AFAP1L1 (ENSGFOG00000010583) GRPEL2 (ENSGFOG00000010597) Passeroidea ANCESTRAL SPECIES 15 ENSGT00940000161364 ENSGT00940000164577 ENSGT00940000158355 ENSGT00940000157712 ENSGT00940000158603 ENSGT00550000074939 ENSGT00530000064262 ENSGT00940000156931 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a ENSGT00390000005589.a.b Common canary MODERN SPECIES 83 MSX2 (ENSSCAG00000014719) NSG2 (ENSSCAG00000014709) CPEB4 (ENSSCAG00000014705) STC2 (ENSSCAG00000014701) NKX2-5 (ENSSCAG00000014697) #22 BNIP1 (ENSSCAG00000014689) #23 CREBRF (ENSSCAG00000014684) #24 ATP6V0E1 (ENSSCAG00000014677) #25 RPL26 (ENSSCAG00000014672) ERGIC1 (ENSSCAG00000014667) #26 DUSP1 (ENSSCAG00000014657) #28 DRD1 (ENSSCAG00000014652) Zebra finch MODERN SPECIES 4 RGS14 (ENSTGUG00000000381) ENSTGUG00000000378 LMAN2 (ENSTGUG00000000376) B4GALT7 (ENSTGUG00000000370) NHP2 (ENSTGUG00000000368) BRD8 (ENSTGUG00000000354) KIF20A (ENSTGUG00000000345) SFXN1 (ENSTGUG00000000341) DRD1 (ENSTGUG00000000340) MSX2 (ENSTGUG00000000339) NSG2 (ENSTGUG00000000333) ENSTGUG00000021029 CPEB4 (ENSTGUG00000000329) ENSTGUG00000000324 STC2 (ENSTGUG00000029550) NKX2-5 (ENSTGUG00000020969) #22 BNIP1 (ENSTGUG00000000316) #23 CREBRF (ENSTGUG00000000314) #24 ENSTGUG00000026118 RPL26 (ENSTGUG00000000309) ERGIC1 (ENSTGUG00000000300) #26 DUSP1 (ENSTGUG00000000299) #28 NEURL1B (ENSTGUG00000000298) #30 SH3PXD2B (ENSTGUG00000022640) STK10 (ENSTGUG00000000289) UBTD2 (ENSTGUG00000029278) ADRB2 (ENSTGUG00000000286) SH3TC2 (ENSTGUG00000000277) ABLIM3 (ENSTGUG00000000269) AFAP1L1 (ENSTGUG00000000263) GRPEL2 (ENSTGUG00000027926) Galloanserae ANCESTRAL SPECIES 14 ENSGT00940000164577 ENSGT00940000158355 ENSGT00940000157712 ENSGT00940000158603 ENSGT00550000074939 ENSGT00530000064262 ENSGT00940000156931 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00960000189351 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a ENSGT00390000005589.a.b Phasianidae ANCESTRAL SPECIES 14 ENSGT00940000164577 ENSGT00940000158355 ENSGT00940000157712 ENSGT00940000158603 ENSGT00550000074939 ENSGT00530000064262 ENSGT00940000156931 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00960000189351 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b.h ENSGT00950000183067.a.b.a ENSGT00390000005589.a.b Japanese quail MODERN SPECIES 4 LMAN2 (ENSCJPG00005009012) B4GALT7 (ENSCJPG00005009011) N4BP3 (ENSCJPG00005009010) NHP2 (ENSCJPG00005009009) ENSCJPG00005009001 BRD8 (ENSCJPG00005009000) KIF20A (ENSCJPG00005008860) SFXN1 (ENSCJPG00005008857) DRD1 (ENSCJPG00005008855) MSX2 (ENSCJPG00005008848) NSG2 (ENSCJPG00005008842) ENSCJPG00005008841 CPEB4 (ENSCJPG00005008840) ENSCJPG00005008838 STC2 (ENSCJPG00005008836) NKX2-5 (ENSCJPG00005008835) #22 BNIP1 (ENSCJPG00005008834) #23 CREBRF (ENSCJPG00005008833) #24 ATP6V0E1 (ENSCJPG00005008830) #25 RPL26 (ENSCJPG00005008829) ERGIC1 (ENSCJPG00005008827) #26 DUSP1 (ENSCJPG00005008826) #28 NEURL1B (ENSCJPG00005008825) #30 SH3PXD2B (ENSCJPG00005008824) STK10 (ENSCJPG00005008823) UBTD2 (ENSCJPG00005008822) ADRB2 (ENSCJPG00005008819) SH3TC2 (ENSCJPG00005008812) ABLIM3 (ENSCJPG00005008809) AFAP1L1 (ENSCJPG00005008808) GRPEL2 (ENSCJPG00005008807) Phasianidae_b ANCESTRAL SPECIES 18 ENSGT00940000164577 ENSGT00940000158355 ENSGT00940000157712 ENSGT00940000158603 ENSGT00550000074939 ENSGT00530000064262 ENSGT00940000156931 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00960000189351 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b.h ENSGT00950000183067.a.b.a ENSGT00390000005589.a.b Chicken MODERN SPECIES 4 B4GALT7 (ENSGALG00010012040) GRK6 (ENSGALG00010012031) N4BP3 (ENSGALG00010012017) NHP2 (ENSGALG00010012228) ENSGALG00010013000 BRD8 (ENSGALG00010012216) KIF20A (ENSGALG00010012186) SFXN1 (ENSGALG00010012149) DRD1 (ENSGALG00010012111) MSX2 (ENSGALG00010008416) HMP19 (ENSGALG00010009415) ENSGALG00010009397 CPEB4 (ENSGALG00010009389) ENSGALG00010009378 STC2 (ENSGALG00010009346) NKX2-5 (ENSGALG00010009324) #22 BNIP1 (ENSGALG00010009311) #23 CREBRF (ENSGALG00010009256) #24 ATP6V0E1 (ENSGALG00010009228) #25 RPL26L1 (ENSGALG00010009170) ERGIC1 (ENSGALG00010009117) #26 DUSP1 (ENSGALG00010008227) #28 NEURL1B (ENSGALG00010012391) #30 SH3PXD2B (ENSGALG00010012382) STK10 (ENSGALG00010012358) UBTD2 (ENSGALG00010012327) ADRB2 (ENSGALG00010012314) SH3TC2 (ENSGALG00010012312) ABLIM3 (ENSGALG00010012297) AFAP1L1 (ENSGALG00010011745) GRPEL2 (ENSGALG00010011784) Turkey MODERN SPECIES 6 ENSMGAG00000004198 ENSMGAG00000004170 LMAN2 (ENSMGAG00000004147) ENSMGAG00000004135 ENSMGAG00000004103 ENSMGAG00000019593 ENSMGAG00000003959 ENSMGAG00000003923 SFXN1 (ENSMGAG00000003820) DRD1 (ENSMGAG00000015442) MSX2 (ENSMGAG00000003712) NSG2 (ENSMGAG00000003692) CPEB4 (ENSMGAG00000003660) ENSMGAG00000003652 STC2 (ENSMGAG00000019072) NKX2-5 (ENSMGAG00000021311) #22 BNIP1 (ENSMGAG00000003611) #23 CREBRF (ENSMGAG00000003597) #24 ENSMGAG00000003585 ERGIC1 (ENSMGAG00000003565) #26 DUSP1 (ENSMGAG00000003557) #28 ENSMGAG00000003546 #30 SH3PXD2B (ENSMGAG00000003508) ENSMGAG00000003464 ENSMGAG00000003447 ADRB2 (ENSMGAG00000022062) ENSMGAG00000003360 AFAP1L1 (ENSMGAG00000003323) PCYOX1L (ENSMGAG00000003301) ENSMGAG00000021310 CSNK1A1 (ENSMGAG00000003239) Anatidae ANCESTRAL SPECIES 15 ENSGT00940000161364 ENSGT00940000164577 ENSGT00940000158355 ENSGT00940000157712 ENSGT00940000158603 ENSGT00530000064262 ENSGT00940000156931 ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00960000189351 ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396.i ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00390000001803 ENSGT00940000163328 ENSGT00940000153768.b Duck MODERN SPECIES 5 ZNF346 (ENSAPLG00000002968) UIMC1 (ENSAPLG00000017474) HK3 (ENSAPLG00000023983) ENSAPLG00000024064 SLC34A1 (ENSAPLG00000011205) N4BP3 (ENSAPLG00000017170) BRD8 (ENSAPLG00000009994) KIF20A (ENSAPLG00000009529) SFXN1 (ENSAPLG00000009192) DRD1 (ENSAPLG00000001868) MSX2 (ENSAPLG00000014116) NSG2 (ENSAPLG00000014133) CPEB4 (ENSAPLG00000022911) ENSAPLG00000002435 STC2 (ENSAPLG00000002303) NKX2-5 (ENSAPLG00000027109) #22 BNIP1 (ENSAPLG00000019770) #23 CREBRF (ENSAPLG00000015493) #24 ATP6V0E1 (ENSAPLG00000015489) #25 RPL26 (ENSAPLG00000015384) ERGIC1 (ENSAPLG00000015229) #26 DUSP1 (ENSAPLG00000015094) #28 NEURL1B (ENSAPLG00000014967) #30 ENSAPLG00000027587 ENSAPLG00000003738 STK10 (ENSAPLG00000003252) ENSAPLG00000023824 UBTD2 (ENSAPLG00000003246) ADRB2 (ENSAPLG00000001729) SH3TC2 (ENSAPLG00000002842) ENSAPLG00000002721 Pink-footed goose MODERN SPECIES 9 RGS14 (ENSABRG00000015214) ENSABRG00000015199 LMAN2 (ENSABRG00000015197) B4GALT7 (ENSABRG00000015195) N4BP3 (ENSABRG00000015193) BRD8 (ENSABRG00000015161) KIF20A (ENSABRG00000015140) SFXN1 (ENSABRG00000015135) DRD1 (ENSABRG00000015133) MSX2 (ENSABRG00000015126) NSG2 (ENSABRG00000015110) ENSABRG00000015107 CPEB4 (ENSABRG00000015105) ENSABRG00000015097 STC2 (ENSABRG00000015092) NKX2-5 (ENSABRG00000015089) #22 BNIP1 (ENSABRG00000015071) #23 CREBRF (ENSABRG00000015069) #24 ATP6V0E1 (ENSABRG00000015067) #25 RPL26 (ENSABRG00000015065) ERGIC1 (ENSABRG00000015062) #26 DUSP1 (ENSABRG00000015058) #28 NEURL1B (ENSABRG00000015049) #30 SH3PXD2B (ENSABRG00000015043) STK10 (ENSABRG00000015024) UBTD2 (ENSABRG00000015011) ADRB2 (ENSABRG00000015003) SH3TC2 (ENSABRG00000014994) ENSABRG00000014990 ENSABRG00000014986 SRA1 (ENSABRG00000014976) African ostrich MODERN SPECIES 151 NKX2-5 (ENSSCUG00000002861) #22 BNIP1 (ENSSCUG00000002862) #23 CREBRF (ENSSCUG00000002864) #24 ENSSCUG00000002866 RPL26 (ENSSCUG00000002868) ERGIC1 (ENSSCUG00000002870) #26 DUSP1 (ENSSCUG00000002873) #28 NEURL1B (ENSSCUG00000002876) #30 SH3PXD2B (ENSSCUG00000002881) STK10 (ENSSCUG00000002883) UBTD2 (ENSSCUG00000002885) ADRB2 (ENSSCUG00000002887) SH3TC2 (ENSSCUG00000002891) ABLIM3 (ENSSCUG00000002892) AFAP1L1 (ENSSCUG00000002902) GRPEL2 (ENSSCUG00000002905) Lepidosauria ANCESTRAL SPECIES 15 ENSGT00510000046929.b ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a tuatara MODERN SPECIES 1391 STC2 (ENSSPUG00000008220) NKX2-5 (ENSSPUG00000008213) #22 BNIP1 (ENSSPUG00000008210) #23 CREBRF (ENSSPUG00000008205) #24 ENSSPUG00000008198 #25 RPL26 (ENSSPUG00000008194) ERGIC1 (ENSSPUG00000008187) #26 DUSP1 (ENSSPUG00000008180) #28 Episquamata ANCESTRAL SPECIES 4 ENSGT00510000046929.b ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a Laterata ANCESTRAL SPECIES 1 ENSGT00510000046929.b ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a Common wall lizard MODERN SPECIES 10 PPP2R2B (ENSPMRG00000011127) STK32A (ENSPMRG00000010954) DPYSL3 (ENSPMRG00000010921) JAKMIP2 (ENSPMRG00000010885) ENSPMRG00000010875 SFXN1 (ENSPMRG00000010861) DRD1 (ENSPMRG00000010857) ENSPMRG00000010855 ENSPMRG00000010852 MSX2 (ENSPMRG00000010849) NSG2 (ENSPMRG00000010843) CPEB4 (ENSPMRG00000010826) ENSPMRG00000010820 ENSPMRG00000010817 STC2 (ENSPMRG00000010807) NKX2-5 (ENSPMRG00000010802) #22 ENSPMRG00000010791 BNIP1 (ENSPMRG00000010790) #23 CREBRF (ENSPMRG00000010780) #24 ENSPMRG00000010776 ATP6V0E1 (ENSPMRG00000010773) #25 RPL26 (ENSPMRG00000015148) ERGIC1 (ENSPMRG00000015142) #26 DUSP1 (ENSPMRG00000015139) #28 NEURL1B (ENSPMRG00000015130) #30 SH3PXD2B (ENSPMRG00000015116) EFCAB9 (ENSPMRG00000015112) STK10 (ENSPMRG00000015086) ADRB2 (ENSPMRG00000015071) SH3TC2 (ENSPMRG00000015037) ABLIM3 (ENSPMRG00000014945) Argentine black and white tegu MODERN SPECIES 1 RBM27 (ENSSMRG00000018037) POU4F3 (ENSSMRG00000018043) TCERG1 (ENSSMRG00000018044) GPR151 (ENSSMRG00000018046) PPP2R2B (ENSSMRG00000018051) STK32A (ENSSMRG00000018063) DPYSL3 (ENSSMRG00000018135) JAKMIP2 (ENSSMRG00000018139) SFXN1 (ENSSMRG00000018164) DRD1 (ENSSMRG00000018166) MSX2 (ENSSMRG00000018167) NSG2 (ENSSMRG00000000041) CPEB4 (ENSSMRG00000000069) ENSSMRG00000000165 STC2 (ENSSMRG00000000202) NKX2-5 (ENSSMRG00000000222) #22 BNIP1 (ENSSMRG00000000231) #23 CREBRF (ENSSMRG00000000260) #24 ATP6V0E1 (ENSSMRG00000000286) #25 RPL26 (ENSSMRG00000000294) ERGIC1 (ENSSMRG00000000312) #26 DUSP1 (ENSSMRG00000000325) #28 NEURL1B (ENSSMRG00000000401) #30 SH3PXD2B (ENSSMRG00000000416) STK10 (ENSSMRG00000000484) EFCAB9 (ENSSMRG00000000510) UBTD2 (ENSSMRG00000000513) ENSSMRG00000000551 ADRB2 (ENSSMRG00000000556) SH3TC2 (ENSSMRG00000000562) ABLIM3 (ENSSMRG00000000668) Toxicofera ANCESTRAL SPECIES 3 ENSGT00510000046929.b ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a Elapidae ANCESTRAL SPECIES 2 ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00990000213989 ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a.o ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a.b ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818.p ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a Elapidae_a ANCESTRAL SPECIES 11 ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00990000213989 ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a.o ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a.b ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818.p ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a Acanthophiinae ANCESTRAL SPECIES 12 ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00990000213989 ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a.o ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a.b ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.c.a.a ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396 ENSGT00940000156818.p ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.b ENSGT00950000183067.a.b.a Eastern brown snake MODERN SPECIES 6 RBM27 (ENSPTXG00000001170) POU4F3 (ENSPTXG00000001165) TCERG1 (ENSPTXG00000001158) GPR151 (ENSPTXG00000001150) PPP2R2B (ENSPTXG00000001144) STK32A (ENSPTXG00000001095) DPYSL3 (ENSPTXG00000001090) JAKMIP2 (ENSPTXG00000001086) SFXN1 (ENSPTXG00000001080) DRD1 (ENSPTXG00000001077) MSX2 (ENSPTXG00000001074) NSG2 (ENSPTXG00000001071) CPEB4 (ENSPTXG00000001069) ENSPTXG00000001067 STC2 (ENSPTXG00000001061) NKX2-5 (ENSPTXG00000001049) #22 BNIP1 (ENSPTXG00000001046) #23 CREBRF (ENSPTXG00000001039) #24 ATP6V0E1 (ENSPTXG00000001035) #25 RPL26 (ENSPTXG00000001032) ERGIC1 (ENSPTXG00000001026) #26 DUSP1 (ENSPTXG00000001023) #28 NEURL1B (ENSPTXG00000001020) #30 SH3PXD2B (ENSPTXG00000001015) STK10 (ENSPTXG00000000694) EFCAB9 (ENSPTXG00000000630) UBTD2 (ENSPTXG00000000628) ADRB2 (ENSPTXG00000000624) SH3TC2 (ENSPTXG00000000607) ABLIM3 (ENSPTXG00000000575) AFAP1L1 (ENSPTXG00000000554) Mainland tiger snake MODERN SPECIES 4 ENSNSUG00000010333 STK32A (ENSNSUG00000010334) DPYSL3 (ENSNSUG00000010352) JAKMIP2 (ENSNSUG00000010451) SFXN1 (ENSNSUG00000010483) DRD1 (ENSNSUG00000010484) ENSNSUG00000010485 ENSNSUG00000010487 ENSNSUG00000010488 ENSNSUG00000010493 NSG2 (ENSNSUG00000010497) CPEB4 (ENSNSUG00000010499) ENSNSUG00000010502 ENSNSUG00000010505 STC2 (ENSNSUG00000010506) NKX2-5 (ENSNSUG00000010507) #22 BNIP1 (ENSNSUG00000010509) #23 CREBRF (ENSNSUG00000010517) #24 ATP6V0E1 (ENSNSUG00000010542) #25 RPL26 (ENSNSUG00000010543) ERGIC1 (ENSNSUG00000010544) #26 DUSP1 (ENSNSUG00000010548) #28 NEURL1B (ENSNSUG00000010551) #30 SH3PXD2B (ENSNSUG00000010565) STK10 (ENSNSUG00000010569) EFCAB9 (ENSNSUG00000010573) UBTD2 (ENSNSUG00000010577) ADRB2 (ENSNSUG00000010579) SH3TC2 (ENSNSUG00000010581) ABLIM3 (ENSNSUG00000010584) AFAP1L1 (ENSNSUG00000010596) Blue-lipped sea krait MODERN SPECIES 6606 STC2 (ENSLLTG00000010447) NKX2-5 (ENSLLTG00000010424) #22 BNIP1 (ENSLLTG00000010411) #23 CREBRF (ENSLLTG00000010386) #24 ATP6V0E1 (ENSLLTG00000010362) #25 Indian cobra MODERN SPECIES 1 POU4F3 (ENSNNAG00000013139) TCERG1 (ENSNNAG00000013161) GPR151 (ENSNNAG00000013194) PPP2R2B (ENSNNAG00000013207) ENSNNAG00000013291 STK32A (ENSNNAG00000013311) DPYSL3 (ENSNNAG00000013525) JAKMIP2 (ENSNNAG00000014540) SFXN1 (ENSNNAG00000014618) DRD1 (ENSNNAG00000014640) MSX2 (ENSNNAG00000014650) NSG2 (ENSNNAG00000014660) CPEB4 (ENSNNAG00000014689) ENSNNAG00000014713 STC2 (ENSNNAG00000014718) NKX2-5 (ENSNNAG00000014737) #22 BNIP1 (ENSNNAG00000014746) #23 CREBRF (ENSNNAG00000014762) #24 ATP6V0E1 (ENSNNAG00000000299) #25 RPL26 (ENSNNAG00000000313) ERGIC1 (ENSNNAG00000000336) #26 DUSP1 (ENSNNAG00000000362) #28 NEURL1B (ENSNNAG00000000391) #30 SH3PXD2B (ENSNNAG00000000415) STK10 (ENSNNAG00000000463) EFCAB9 (ENSNNAG00000000494) UBTD2 (ENSNNAG00000000511) ADRB2 (ENSNNAG00000000525) SH3TC2 (ENSNNAG00000000550) ABLIM3 (ENSNNAG00000000585) AFAP1L1 (ENSNNAG00000000702) Lizard MODERN SPECIES 1 FGF1 (ENSACAG00000043127) ARHGAP26 (ENSACAG00000013456) NR3C1 (ENSACAG00000013668) ENSACAG00000009454 FOSL2 (ENSACAG00000009506) ENSACAG00000044182 BABAM2 (ENSACAG00000009552) ENSACAG00000039011 RBKS (ENSACAG00000009636) ENSACAG00000037255 ENSACAG00000036914 SLC4A1AP (ENSACAG00000009669) SUPT7L (ENSACAG00000009730) ENSACAG00000043354 STC2 (ENSACAG00000044393) NKX2-5 (ENSACAG00000015142) #22 ENSACAG00000038558 ENSACAG00000035116 BNIP1 (ENSACAG00000015149) #23 CREBRF (ENSACAG00000015164) #24 ATP6V0E1 (ENSACAG00000015183) #25 ENSACAG00000015187 ERGIC1 (ENSACAG00000015210) #26 DUSP1 (ENSACAG00000015246) #28 ENSACAG00000039578 ENSACAG00000015261 #30 SH3PXD2B (ENSACAG00000042684) ENSACAG00000036124 STK10 (ENSACAG00000015294) ENSACAG00000015404 UBTD2 (ENSACAG00000015415) Anura ANCESTRAL SPECIES 123 ENSGT00390000012163 ENSGT00510000046929.b ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857 ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165.d ENSGT00530000063113.C #26 ENSGT00940000159044 #28 ENSGT00940000157079.a #30 ENSGT00940000158396.r Frog MODERN SPECIES 3 pole4 (ENSXETG00000014422) sh3pxd2b (ENSXETG00000038056) ENSXETG00000042376 ENSXETG00000040995 neurl1b (ENSXETG00000001703) #30 ergic1 (ENSXETG00000018301) #26 dusp1 (ENSXETG00000027880) #28 tlr22 (ENSXETG00000046119) sfxn1 (ENSXETG00000035035) drd1 (ENSXETG00000013921) msx2 (ENSXETG00000009168) ENSXETG00000041565 nsg2 (ENSXETG00000009166) cpeb4 (ENSXETG00000012731) stc2 (ENSXETG00000012730) nkx2-5 (ENSXETG00000012729) #22 bnip1 (ENSXETG00000044127) #23 crebrf (ENSXETG00000012727) #24 ENSXETG00000042330 atp6v0e1 (ENSXETG00000024781) #25 jakmip2 (ENSXETG00000012726) rpl26 (ENSXETG00000024782) dpysl3 (ENSXETG00000012718) stk32a (ENSXETG00000012715) arhgef37 (ENSXETG00000012714) ppargc1b (ENSXETG00000012711) pde6a (ENSXETG00000012709) slc26a2 (ENSXETG00000049390) slc26a2.2 (ENSXETG00000031991) ENSXETG00000045931 ENSXETG00000047377 Leishan spiny toad MODERN SPECIES 6 STK32A (ENSLLEG00000005750) DPYSL3 (ENSLLEG00000005868) ENSLLEG00000006286 JAKMIP2 (ENSLLEG00000006335) SFXN1 (ENSLLEG00000006593) ENSLLEG00000006728 DRD1 (ENSLLEG00000006740) MSX2 (ENSLLEG00000006764) ENSLLEG00000006787 ENSLLEG00000006796 NSG2 (ENSLLEG00000006827) ENSLLEG00000006910 CPEB4 (ENSLLEG00000006945) ENSLLEG00000007121 STC2 (ENSLLEG00000007140) NKX2-5 (ENSLLEG00000007176) #22 BNIP1 (ENSLLEG00000007209) #23 CREBRF (ENSLLEG00000007256) #24 ATP6V0E1 (ENSLLEG00000007416) #25 ENSLLEG00000007449 ERGIC1 (ENSLLEG00000007494) #26 DUSP1 (ENSLLEG00000007651) #28 ENSLLEG00000007678 ENSLLEG00000007690 ENSLLEG00000007700 NEURL1B (ENSLLEG00000007712) #30 SH3PXD2B (ENSLLEG00000007755) STK10 (ENSLLEG00000007889) UBTD2 (ENSLLEG00000008051) ENSLLEG00000008087 ADRB2 (ENSLLEG00000008145) Coelacanth MODERN SPECIES 350 JAKMIP2 (ENSLACG00000017732) SFXN1 (ENSLACG00000017635) DRD1 (ENSLACG00000017600) MSX2 (ENSLACG00000016991) CPEB4 (ENSLACG00000016073) ENSLACG00000015630 STC2 (ENSLACG00000015101) NKX2-5 (ENSLACG00000014905) #22 BNIP1 (ENSLACG00000014693) #23 ENSLACG00000014584 #24 ATP6V0E1 (ENSLACG00000014424) #25 ERGIC1 (ENSLACG00000014277) #26 DUSP1 (ENSLACG00000013873) #28 NEURL1B (ENSLACG00000012188) #30 ENSLACG00000022527 SH3PXD2B (ENSLACG00000011512) STK10 (ENSLACG00000010317) EFCAB9 (ENSLACG00000009380) UBTD2 (ENSLACG00000008618) ENSLACG00000006931 ADRB2 (ENSLACG00000003531) Actinopterygii ANCESTRAL SPECIES 103 ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857.f ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000154979 ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00940000160854 ENSGT00390000011206.b ENSGT00390000005589.a.b ENSGT00950000183067.a.b.a ENSGT00950000182850.a.b.a.b.b ENSGT00530000063812.B ENSGT00940000159538 ENSGT00940000156641 ENSGT00390000007501 ENSGT00390000012630.A ENSGT00390000010107 Reedfish MODERN SPECIES 2 TBC1D9B (ENSECRG00000012193) ENSECRG00000012360 thg1l (ENSECRG00000012548) LSM11 (ENSECRG00000012570) clint1a (ENSECRG00000012588) ebf3a (ENSECRG00000012609) ENSECRG00000012625 rnf145b (ENSECRG00000012658) ublcp1 (ENSECRG00000012695) drd1b (ENSECRG00000012720) MSX2 (ENSECRG00000012727) nsg2 (ENSECRG00000012742) CPEB4 (ENSECRG00000012778) BOD1 (ENSECRG00000012812) stc2a (ENSECRG00000012818) nkx2.5 (ENSECRG00000012831) #22 BNIP1 (ENSECRG00000012841) #23 BNIP1 (ENSECRG00000012851) #23 CREBRF (ENSECRG00000012865) #24 ATP6V0E1 (ENSECRG00000012875) #25 rpl26 (ENSECRG00000012885) IL17B (ENSECRG00000012898) PCYOX1L (ENSECRG00000012911) grpel2 (ENSECRG00000012927) afap1l1a (ENSECRG00000012954) ablim3 (ENSECRG00000012996) SH3TC2 (ENSECRG00000013029) adrb2a (ENSECRG00000013059) ubtd2 (ENSECRG00000013076) ENSECRG00000013124 ENSECRG00000013178 Neopterygii ANCESTRAL SPECIES 24 ENSGT00940000159531 ENSGT00940000159491 ENSGT00390000015484.j ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153713.B.d ENSGT01030000234641.b.a.b.a.b ENSGT00940000155857.f ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000156198.c.b ENSGT00390000005989.a ENSGT00940000158996 #22 ENSGT00390000014412 #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00940000160854 ENSGT00390000011206.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000157770 ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650 ENSGT00950000182859.A.a.b.a.b ENSGT00950000182932.A.b.a.b Spotted gar MODERN SPECIES 672 ENSLOCG00000008961 zgc:194679 (ENSLOCG00000018301) ENSLOCG00000008978 ENSLOCG00000008984 ENSLOCG00000009010 ENSLOCG00000009017 ENSLOCG00000009036 ENSLOCG00000009044 ENSLOCG00000009060 ENSLOCG00000009084 ENSLOCG00000009113 ENSLOCG00000009124 CPEB4 (ENSLOCG00000009131) bod1 (ENSLOCG00000009148) stc2a (ENSLOCG00000009157) nkx2.5 (ENSLOCG00000009163) #22 BNIP1 (ENSLOCG00000009167) #23 CREBRF (ENSLOCG00000009174) #24 atp6v0e1 (ENSLOCG00000009182) #25 rpl26 (ENSLOCG00000009189) IL17B (ENSLOCG00000009196) PCYOX1L (ENSLOCG00000009203) ppp2r2bb (ENSLOCG00000009212) GPR151 (ENSLOCG00000018302) ENSLOCG00000009227 ADAM19 (ENSLOCG00000009244) thg1l (ENSLOCG00000009255) LSM11 (ENSLOCG00000009264) clint1a (ENSLOCG00000009271) ebf3a (ENSLOCG00000009282) rnf145b (ENSLOCG00000009293) Osteoglossocephalai ANCESTRAL SPECIES 77 ENSGT00940000155857.f.b ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00390000000483.a.a ENSGT00940000154998.a.a ENSGT00940000156198.c.b ENSGT00390000005989.a.b ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00390000005989.a.a.b ENSGT00390000014412.k #23 ENSGT00390000007125.b #24 ENSGT00940000156866 #25 ENSGT00390000011206.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000157770 ENSGT00940000161042 ENSGT00940000155650.a.b ENSGT00950000182859.A.a.b.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 Osteoglossiformes ANCESTRAL SPECIES 23 ENSGT00940000157254.o ENSGT00940000156385.a ENSGT00940000153168.C.a.a ENSGT00940000156071.a ENSGT00950000182810.A.b ENSGT00940000160067 ENSGT00390000012163 ENSGT00510000046929.b.h ENSGT00940000160880.c ENSGT00940000156386.d ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00390000000483.a.a.f ENSGT00940000154998.a.a.t ENSGT00390000005989.a.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00390000007125.b.h #24 ENSGT01030000238653 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00940000160854 ENSGT01030000234518.A.a.b ENSGT00940000157770 ENSGT00940000161042 ENSGT00940000159624.b ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.a ENSGT00940000157281.x Asian bonytongue MODERN SPECIES 4 ENSSFOG00015018500 ARHGAP26 (ENSSFOG00015018403) nr3c1 (ENSSFOG00015018348) yipf5 (ENSSFOG00015031270) kctd16a (ENSSFOG00015018302) PRELID2 (ENSSFOG00015018273) SH3RF2 (ENSSFOG00015018215) LARS1 (ENSSFOG00015018117) RBM27 (ENSSFOG00015018009) pou4f3 (ENSSFOG00015017993) DRD1 (ENSSFOG00015017983) MSX2 (ENSSFOG00015025283) NSG2 (ENSSFOG00015017958) CPEB4 (ENSSFOG00015017925) STC2 (ENSSFOG00015017907) nkx2.5 (ENSSFOG00015017890) #22 BNIP1 (ENSSFOG00015026362) #23 CREBRF (ENSSFOG00015017854) #24 ENSSFOG00015017779 rpl26 (ENSSFOG00015026723) IL17B (ENSSFOG00015017749) PPP2R2B (ENSSFOG00015031806) GPR151 (ENSSFOG00015017703) tcerg1a (ENSSFOG00015017666) ADAM19 (ENSSFOG00015017640) thg1l (ENSSFOG00015017619) LSM11 (ENSSFOG00015025495) clint1a (ENSSFOG00015017553) EBF1 (ENSSFOG00015017450) RNF145 (ENSSFOG00015017406) ENSSFOG00015017328 P. kingsleyae MODERN SPECIES 407 nkx2.5 (ENSPKIG00000002891) #22 BNIP1 (ENSPKIG00000002855) #23 CREBRF (ENSPKIG00000002819) #24 atp6v0e1 (ENSPKIG00000002748) #25 rpl26 (ENSPKIG00000002725) IL17B (ENSPKIG00000002711) PPP2R2B (ENSPKIG00000002647) GPR151 (ENSPKIG00000002624) tcerg1a (ENSPKIG00000002573) ENSPKIG00000002484 ENSPKIG00000002429 thg1l (ENSPKIG00000002407) LSM11 (ENSPKIG00000002386) clint1a (ENSPKIG00000002366) EBF1 (ENSPKIG00000002259) RNF145 (ENSPKIG00000002192) Clupeocephala ANCESTRAL SPECIES 496 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.b ENSGT00940000158996 #22 ENSGT00390000014412.l #23 Otomorpha ANCESTRAL SPECIES 259 ENSGT00950000183003.a.a.a.a.b.d ENSGT00940000159784 ENSGT00390000004029 ENSGT00940000156067.g.b ENSGT00390000014316.c.b ENSGT00940000165035.a ENSGT00940000156385.a ENSGT00940000156071.a ENSGT00940000160067 ENSGT00940000156386 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.b ENSGT00940000158996 #22 ENSGT00390000014412.l #23 Otophysi ANCESTRAL SPECIES 258 ENSGT00940000155470.a ENSGT00440000037505.b ENSGT00550000075136 ENSGT00940000156067.g.b ENSGT00390000014316.c.b ENSGT00940000165035.a ENSGT00940000156385.a ENSGT00940000156071.a ENSGT00940000155875 ENSGT00940000156386 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.b ENSGT00940000158996 #22 ENSGT00390000014412.l #23 Characiphysae ANCESTRAL SPECIES 86 ENSGT00440000037505.b ENSGT00550000075136 ENSGT00940000156067.g.b ENSGT00390000014316.c.b ENSGT00940000165035.a ENSGT00940000156385.a ENSGT00940000156071.a ENSGT00940000158460 ENSGT00940000155875 ENSGT00940000156386 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.b ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000164356.a ENSGT00940000164356.b ENSGT00950000183177.a.a.a.a.g ENSGT00940000178677 ENSGT00940000166254.a ENSGT00940000164577.b ENSGT00940000177027 ENSGT00940000165461 ENSGT00950000183027.a.a.b ENSGT00940000154508.a.a.s.b ENSGT00520000055589.d.a.a ENSGT00940000163251.b.j ENSGT00390000006550 ENSGT00390000005922.b Characiphysae_b ANCESTRAL SPECIES 32 ENSGT00440000037505.b ENSGT00550000075136 ENSGT00940000156067.g.b ENSGT00390000014316.c.b ENSGT00940000165035.a ENSGT00940000156385.a ENSGT00940000156071.a ENSGT00940000158460 ENSGT00940000155875 ENSGT00940000156386 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.b ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000164356.a ENSGT00940000164356.b ENSGT00950000183177.a.a.a.a.g ENSGT00940000178677 ENSGT00940000166254.a ENSGT00940000164577.b ENSGT00940000177027 ENSGT00940000154508.a.a.s.b ENSGT00520000055589.d.a.a ENSGT00940000163251.b.j ENSGT00390000006550 ENSGT00390000005922.b ENSGT00940000159225 ENSGT00940000165282.a Characoidei ANCESTRAL SPECIES 102 ENSGT00390000006788.a.a ENSGT00940000155470.a ENSGT00440000037505.b ENSGT00550000075136 ENSGT00940000156067.g.b ENSGT00390000014316.c.b ENSGT00940000165035.a ENSGT00940000156385.a ENSGT00940000156071.a ENSGT00940000155875 ENSGT00940000156386 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000154998.a.b ENSGT00390000005989.a.b.b ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000164356.a.g ENSGT00950000183177.a.a.a.a.g ENSGT00940000178677 ENSGT00940000166254.a ENSGT00940000164577.b ENSGT00940000177027 ENSGT00940000154508.a.a.s.b ENSGT00520000055589.d.a.a ENSGT00940000163251.b.j ENSGT00390000006550 ENSGT00390000005922.b ENSGT00940000159225 ENSGT00940000165282.a ENSGT00530000064262.pc.b Red-bellied piranha MODERN SPECIES 95 ENSPNAG00000010851 SLC4A11 (ENSPNAG00000010831) hspa4b (ENSPNAG00000010764) gnpda1 (ENSPNAG00000001421) ndfip1 (ENSPNAG00000010636) fgf1a (ENSPNAG00000010607) nr3c1 (ENSPNAG00000010593) kctd16a (ENSPNAG00000010562) ENSPNAG00000001406 ENSPNAG00000010543 kif3a (ENSPNAG00000010505) DRD1 (ENSPNAG00000010364) MSX2 (ENSPNAG00000010350) cpeb4a (ENSPNAG00000010337) stc2a (ENSPNAG00000010234) nkx2.5 (ENSPNAG00000010223) #22 BNIP1 (ENSPNAG00000010213) #23 ENSPNAG00000010184 SLC34A1 (ENSPNAG00000010150) rgs14a (ENSPNAG00000010119) arl3l2 (ENSPNAG00000010083) ENSPNAG00000010054 ENSPNAG00000010045 ENSPNAG00000010016 RBM22 (ENSPNAG00000010001) acsl1b (ENSPNAG00000009971) STOX2 (ENSPNAG00000009894) ENSPNAG00000009865 trappc11 (ENSPNAG00000009830) Mexicana tetra MODERN SPECIES 23 med12 (ENSAMXG00000011603) MARS2 (ENSAMXG00000011610) hspa4b (ENSAMXG00000011616) gnpda1 (ENSAMXG00000011634) ndfip1 (ENSAMXG00000011640) fgf1a (ENSAMXG00000035950) nr3c1 (ENSAMXG00000011646) kctd16a (ENSAMXG00000030164) ENSAMXG00000041131 kif3a (ENSAMXG00000011654) DRD1 (ENSAMXG00000025106) ENSAMXG00000038880 cpeb4a (ENSAMXG00000030295) ENSAMXG00000043304 stc2a (ENSAMXG00000037057) nkx2.5 (ENSAMXG00000030019) #22 BNIP1 (ENSAMXG00000038546) #23 adra2db (ENSAMXG00000025107) SLC34A1 (ENSAMXG00000018474) ENSAMXG00000044001 rgs14a (ENSAMXG00000034408) arl3l2 (ENSAMXG00000018516) ENSAMXG00000036134 ENSAMXG00000041314 ENSAMXG00000039734 ENSAMXG00000033466 RBM22 (ENSAMXG00000018529) acsl1b (ENSAMXG00000018560) STOX2 (ENSAMXG00000018621) ENSAMXG00000031413 trappc11 (ENSAMXG00000018665) Electric eel DUPLICATION Electric eel MODERN SPECIES 166 slc18b1 (ENSEEEG00000001173) bmp1a (ENSEEEG00000001174) DISP3 (ENSEEEG00000001175) ENSEEEG00000001177 rab7b (ENSEEEG00000001180) zgc:56596 (ENSEEEG00000001182) ENSEEEG00000001183 ENSEEEG00000001185 ENSEEEG00000001187 BIN3 (ENSEEEG00000001190) egr3 (ENSEEEG00000001192) PEBP4 (ENSEEEG00000001195) RHOBTB2 (ENSEEEG00000001197) ido1 (ENSEEEG00000001200) stc1 (ENSEEEG00000001220) nkx2.7 (ENSEEEG00000001221) #22 nkx3-1 (ENSEEEG00000001222) slc25a37 (ENSEEEG00000001223) entpd4 (ENSEEEG00000001224) Electric eel MODERN SPECIES 274 DRD1 (ENSEEEG00000012860) msx2a (ENSEEEG00000012862) cpeb4a (ENSEEEG00000012864) stc2a (ENSEEEG00000012880) nkx2.5 (ENSEEEG00000012882) #22 BNIP1 (ENSEEEG00000012883) #23 adra2da (ENSEEEG00000012884) SLC34A1 (ENSEEEG00000012885) rgs14a (ENSEEEG00000012893) ENSEEEG00000012895 RBM22 (ENSEEEG00000012898) acsl1b (ENSEEEG00000012946) STOX2 (ENSEEEG00000013530) ENSEEEG00000013533 trappc11 (ENSEEEG00000013539) hars (ENSEEEG00000013558) dnd1 (ENSEEEG00000013898) gfra3 (ENSEEEG00000013932) brd8b (ENSEEEG00000013936) ENSEEEG00000013946 Channel catfish DUPLICATION Channel catfish MODERN SPECIES 24 kansl3 (ENSIPUG00000006651) BMP1 (ENSIPUG00000006800) disp3 (ENSIPUG00000006991) ENSIPUG00000007113 rab7b (ENSIPUG00000007246) ubl4a (ENSIPUG00000007316) b2ml (ENSIPUG00000007328) ENSIPUG00000007359 ENSIPUG00000007504 Bin3 (ENSIPUG00000007558) EGR3 (ENSIPUG00000007608) ENSIPUG00000007626 rhobtb2b (ENSIPUG00000007664) ido1 (ENSIPUG00000007761) stc1 (ENSIPUG00000007803) NKX2-6 (ENSIPUG00000007809) #22 nkx3-1 (ENSIPUG00000007819) slc25a37 (ENSIPUG00000007837) entpd4 (ENSIPUG00000007887) chmp7 (ENSIPUG00000007955) lgi3 (ENSIPUG00000008020) fgfr1a (ENSIPUG00000008062) ankrd39 (ENSIPUG00000008140) ENSIPUG00000008167 hpdb (ENSIPUG00000008226) IQSEC2 (ENSIPUG00000008257) ENSIPUG00000008291 ENSIPUG00000008331 gpkow (ENSIPUG00000008342) pqbp1 (ENSIPUG00000008358) TIMM17B (ENSIPUG00000008377) Channel catfish MODERN SPECIES 5 ENSIPUG00000009667 med12 (ENSIPUG00000009787) MARS2 (ENSIPUG00000009852) hspa4b (ENSIPUG00000009875) gnpda1 (ENSIPUG00000009918) ndfip1l (ENSIPUG00000010007) fgf1a (ENSIPUG00000010050) nr3c1 (ENSIPUG00000010081) kctd16a (ENSIPUG00000010102) ENSIPUG00000010109 KIF3A (ENSIPUG00000010161) DRD1 (ENSIPUG00000010246) MSX2 (ENSIPUG00000010256) cpeb4a (ENSIPUG00000010268) STC2 (ENSIPUG00000010313) nkx2-5 (ENSIPUG00000010324) #22 bnip1 (ENSIPUG00000010328) #23 ENSIPUG00000010353 SLC34A1 (ENSIPUG00000010376) ENSIPUG00000010459 rgs14a (ENSIPUG00000010477) ENSIPUG00000010492 ENSIPUG00000010512 ENSIPUG00000010567 acsl1b (ENSIPUG00000010613) STOX2 (ENSIPUG00000010694) ENSIPUG00000010715 gfra3 (ENSIPUG00000010739) dnd1 (ENSIPUG00000010743) hars (ENSIPUG00000010757) trappc11 (ENSIPUG00000010843) Cyprinoidei ANCESTRAL SPECIES 9 ENSGT00440000037505.b ENSGT00550000075136 ENSGT00940000156067.g.b ENSGT00390000014316.c.b ENSGT00390000012721.a ENSGT00940000165035.a ENSGT00940000156385.a ENSGT00940000156071.a ENSGT00940000155875 ENSGT00940000156386 ENSGT00990000209953 ENSGT00940000157037.a.d ENSGT00940000164716.A ENSGT00940000154998.a.b.k ENSGT00390000005989.a.b.b ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000162301 ENSGT00940000155070.a.b.a ENSGT00940000153147.a.b ENSGT00940000154808.a.b.j.a ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618.d ENSGT00940000159322 ENSGT00950000183088.a.a ENSGT00950000183137.b.b ENSGT00940000156471.b.h ENSGT00940000155983.a.a ENSGT01100000263544.c.a.a.a ENSGT00510000048167.b.b Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 215 ENSGT00940000156522.c.a.a ENSGT00940000177721.b.a.a ENSGT00390000007636.l ENSGT00940000157176.a.i ENSGT00940000157931.e ENSGT00940000165180.a ENSGT00940000155864.b.c.b.c.a ENSGT00730000111022.o ENSGT00940000176487.b ENSGT00940000166050.c ENSGT00950000182882.B.b ENSGT00940000160355.b ENSGT00940000158918.g.a ENSGT00940000164380.a.c ENSGT00390000005989.b.a.b ENSGT00940000158996.g.a #22 ENSGT00940000165452.b ENSGT00940000160930.b ENSGT00940000158607.m ENSGT01100000263540.B.d.a ENSGT00940000160296.e ENSGT00940000155860.a.e.b.a ENSGT00940000155860.b ENSGT00940000160547 ENSGT00940000154314.b.b ENSGT00940000164226.a.a.e ENSGT00940000159598.d ENSGT00940000164254.a.a.a ENSGT00390000008529.e ENSGT00940000158510.f.b ENSGT00950000183083.a.d.b.u Cyprininae_a ANCESTRAL SPECIES 214 ENSGT00940000156522.c.a.a ENSGT00940000177721.b.a.a ENSGT00390000007636.l ENSGT00940000157176.a.i ENSGT00940000157931.e ENSGT00940000165180.a ENSGT00940000155864.b.c.b.c.a ENSGT00730000111022.o.a ENSGT00940000176487.b ENSGT00940000166050.c ENSGT00950000182882.B.b ENSGT00940000160355.b ENSGT00940000158918.g.a ENSGT00940000164380.a.c ENSGT00390000005989.b.a.b ENSGT00940000158996.g.a #22 ENSGT00940000160930.a ENSGT00940000158607.m ENSGT01100000263540.B.d.a ENSGT00940000160296.e ENSGT00940000155860.a.e.b.a ENSGT00940000155860.b ENSGT00940000160547 ENSGT00940000154314.b.b ENSGT00940000164226.a.a.e ENSGT00940000159598.d ENSGT00940000164254.a.a.a ENSGT00390000008529.e ENSGT00390000013287.n ENSGT00940000158510.f.b ENSGT00950000183083.a.d.b.u Golden-line barbel MODERN SPECIES 684 stc1 (ENSSGRG00000043272) nkx2.7 (ENSSGRG00000043270) #22 ENSSGRG00000043269 slc25a37 (ENSSGRG00000043268) entpd4 (ENSSGRG00000042782) chmp7 (ENSSGRG00000042778) chmp7 (ENSSGRG00000042770) lgi3 (ENSSGRG00000042767) FGFR1 (ENSSGRG00000041190) ENSSGRG00000041119 ankrd39 (ENSSGRG00000041118) kctd9a (ENSSGRG00000041018) Common carp reference MODERN SPECIES 17 kansl3 (ENSCCRG00000027757) ENSCCRG00000063814 bmp1a (ENSCCRG00000002473) ENSCCRG00000050692 ENSCCRG00000044610 rab7b (ENSCCRG00000044991) zgc:56596 (ENSCCRG00000080294) ENSCCRG00000068087 ENSCCRG00000006128 ENSCCRG00000055446 egr3 (ENSCCRG00000024623) ENSCCRG00000058097 ENSCCRG00000027089 ido1 (ENSCCRG00000028835) stc1 (ENSCCRG00000060953) nkx2.7 (ENSCCRG00000053768) #22 nkx3-1 (ENSCCRG00000052651) slc25a37 (ENSCCRG00000061036) entpd4 (ENSCCRG00000023329) lgi3 (ENSCCRG00000055167) fgfr1a (ENSCCRG00000033246) ENSCCRG00000065151 ankrd39 (ENSCCRG00000072968) kctd9a (ENSCCRG00000056054) npy8br (ENSCCRG00000055247) ENSCCRG00000062067 tbx16 (ENSCCRG00000007555) ENSCCRG00000039056 CEP78 (ENSCCRG00000043030) ENSCCRG00000006968 vps13a (ENSCCRG00000077561) Cyprininae ANCESTRAL SPECIES 224 ENSGT00390000007636.k ENSGT00940000157176.a.j ENSGT00940000157931.f ENSGT00940000165180.b ENSGT00940000155864.b.c.b.c.b ENSGT00730000111022.p ENSGT00940000165013.b.b ENSGT00940000176487.a ENSGT00940000166050.d ENSGT00950000182882.B.a ENSGT00940000160355.a ENSGT00940000162387 ENSGT00940000158918.g.b ENSGT00940000164380.a.d ENSGT00390000005989.b.a.a ENSGT00940000158996.g.b #22 ENSGT00940000160930.a ENSGT00940000158607.n ENSGT01100000263540.B.d.b ENSGT00720000108860 ENSGT00940000160296.f ENSGT00940000155860.a.e.a ENSGT00940000154314.b.a ENSGT00950000182847.b.b.b.d ENSGT00940000164226.a.a.f ENSGT00940000159598.c ENSGT00940000164254.a.a.b ENSGT00390000008529.f ENSGT00390000013287 ENSGT00940000158510.e ENSGT00940000159152.d.m.b Goldfish DUPLICATION Goldfish MODERN SPECIES 48 kansl3 (ENSCARG00000001693) bmp1a (ENSCARG00000001904) DISP3 (ENSCARG00000003984) ENSCARG00000004365 rab7b (ENSCARG00000005499) zgc:56596 (ENSCARG00000005509) b2ml (ENSCARG00000005518) ENSCARG00000005523 ENSCARG00000005533 BIN3 (ENSCARG00000005549) egr3 (ENSCARG00000005564) PEBP4 (ENSCARG00000005571) RHOBTB2 (ENSCARG00000005592) ido1 (ENSCARG00000005635) stc1 (ENSCARG00000005677) nkx2.7 (ENSCARG00000005685) #22 nkx3-1 (ENSCARG00000005692) slc25a37 (ENSCARG00000005700) entpd4 (ENSCARG00000005794) chmp7 (ENSCARG00000007050) EP400 (ENSCARG00000007179) ncor2 (ENSCARG00000008247) rflna (ENSCARG00000010726) ENSCARG00000010732 ccdc92 (ENSCARG00000010737) prnpa (ENSCARG00000010745) ENSCARG00000010778 KCNIP3 (ENSCARG00000011073) ENSCARG00000011359 crybb2 (ENSCARG00000011368) ENSCARG00000011379 Goldfish MODERN SPECIES 14 ENSCARG00000027248 ENSCARG00000027242 kansl3 (ENSCARG00000027200) bmp1a (ENSCARG00000018102) DISP3 (ENSCARG00000017679) ENSCARG00000017234 rab7b (ENSCARG00000017207) zgc:56596 (ENSCARG00000017192) b2ml (ENSCARG00000017182) ENSCARG00000017110 BIN3 (ENSCARG00000017074) egr3 (ENSCARG00000017059) RHOBTB2 (ENSCARG00000017010) ido1 (ENSCARG00000016991) stc1 (ENSCARG00000016983) nkx2.7 (ENSCARG00000016980) #22 nkx3-1 (ENSCARG00000016954) slc25a37 (ENSCARG00000016945) entpd4 (ENSCARG00000016366) lgi3 (ENSCARG00000016319) fgfr1a (ENSCARG00000016155) ENSCARG00000016133 ENSCARG00000016121 ENSCARG00000016096 NTSR1 (ENSCARG00000016091) ENSCARG00000016027 ENSCARG00000016015 fkbp1aa (ENSCARG00000015995) ENSCARG00000015991 PRICKLE3 (ENSCARG00000015952) plp2b (ENSCARG00000015941) Cyprininae_a ANCESTRAL SPECIES 96 ENSGT00510000053055.b ENSGT00390000007636.k ENSGT00940000157176.a.j ENSGT00940000157931.f ENSGT00940000165180.b ENSGT00940000155864.b.c.b.c.b ENSGT00730000111022.o.b ENSGT00940000165013.b.b ENSGT00940000166050.d ENSGT00950000182882.B.a ENSGT00940000160355.a ENSGT00940000162387 ENSGT00940000158918.g.b ENSGT00940000164380.a.d ENSGT00390000005989.b.a.a ENSGT00940000158996.g.b #22 ENSGT00940000165452.b ENSGT00940000158607.n ENSGT01100000263540.B.d.b ENSGT00720000108860 ENSGT00940000160296.f ENSGT00940000155860.a.e.b.b ENSGT00940000155860.a.e.a ENSGT00940000154314.b.a ENSGT00950000182847.b.b.b.d ENSGT00940000164226.a.a.f ENSGT00940000159598.c ENSGT00940000164254.a.a.b ENSGT00390000008529.f ENSGT00390000013287.m ENSGT00940000158510.e Golden-line barbel MODERN SPECIES 464 ENSSGRG00000042391 ENSSGRG00000042393 kansl3 (ENSSGRG00000042403) bmp1a (ENSSGRG00000042664) ENSSGRG00000045015 rab7b (ENSSGRG00000045531) zgc:56596 (ENSSGRG00000045538) b2ml (ENSSGRG00000045546) ENSSGRG00000045657 BIN3 (ENSSGRG00000048374) egr3 (ENSSGRG00000048376) PEBP4 (ENSSGRG00000048378) RHOBTB2 (ENSSGRG00000048379) ido1 (ENSSGRG00000048385) stc1 (ENSSGRG00000048401) nkx2.7 (ENSSGRG00000048402) #22 slc25a37 (ENSSGRG00000048404) entpd4 (ENSSGRG00000048406) lgi3 (ENSSGRG00000048703) FGFR1 (ENSSGRG00000048707) kctd9a (ENSSGRG00000048751) ENSSGRG00000048823 npy8br (ENSSGRG00000048825) Common carp reference MODERN SPECIES 23 b2ml (ENSCCRG00000068375) ENSCCRG00000002721 ENSCCRG00000058768 rab7b (ENSCCRG00000013019) zgc:56596 (ENSCCRG00000011550) ENSCCRG00000081523 ENSCCRG00000071427 ENSCCRG00000067060 ENSCCRG00000004301 BIN3 (ENSCCRG00000052948) egr3 (ENSCCRG00000028691) PEBP4 (ENSCCRG00000081393) ido1 (ENSCCRG00000013200) ENSCCRG00000013079 stc1 (ENSCCRG00000004251) nkx2.7 (ENSCCRG00000010174) #22 ENSCCRG00000012365 slc25a37 (ENSCCRG00000048886) entpd4 (ENSCCRG00000043971) chmp7 (ENSCCRG00000009191) lgi3 (ENSCCRG00000009243) fgfr1a (ENSCCRG00000005159) kctd9a (ENSCCRG00000057928) ENSCCRG00000053256 npy8br (ENSCCRG00000074211) ENSCCRG00000007551 tbx16 (ENSCCRG00000082779) ENSCCRG00000079557 CEP78 (ENSCCRG00000061044) ENSCCRG00000053282 vps13a (ENSCCRG00000061422) Cyprininae ANCESTRAL SPECIES 268 ENSGT00940000156386.f ENSGT00940000156386.e.a ENSGT00990000209953.a ENSGT00390000012721.a.j.b.b ENSGT00940000156385.a.b ENSGT00940000156071.a.b.a.a ENSGT00940000156386.e.b ENSGT00990000209953.b ENSGT00940000157037.a.d ENSGT00940000164716.A.a ENSGT00940000154998.a.b.k.b ENSGT00390000005989.a.b.b.a ENSGT00940000164716.A.b ENSGT00940000154998.a.b.k.a ENSGT00390000005989.a.b.b.b ENSGT00940000158996.h #22 ENSGT00390000014412.l #23 ENSGT00940000162301 ENSGT00940000155070.a.b.a.a ENSGT00940000153147.a.b ENSGT00940000157891.b ENSGT00940000155070.a.b.a.b ENSGT00940000154808.a.b.j.a ENSGT00940000157891.a ENSGT00950000183033.a.b.b.d ENSGT00390000000618.d ENSGT00940000159322.f Goldfish DUPLICATION Goldfish MODERN SPECIES 5 ENSCARG00000009216 ENSCARG00000009174 hspa4b (ENSCARG00000009046) gnpda1 (ENSCARG00000008994) ndfip1 (ENSCARG00000008984) fgf1a (ENSCARG00000008975) nr3c1 (ENSCARG00000008819) kctd16a (ENSCARG00000008801) ENSCARG00000008797 kif3a (ENSCARG00000008420) il4 (ENSCARG00000008385) ENSCARG00000008381 msx2a (ENSCARG00000008376) cpeb4a (ENSCARG00000008113) stc2a (ENSCARG00000008081) nkx2.5 (ENSCARG00000008074) #22 BNIP1 (ENSCARG00000008054) #23 dpf2l (ENSCARG00000008017) hnrnpa0a (ENSCARG00000008003) fam13b (ENSCARG00000007927) CXCL14 (ENSCARG00000007898) slit3 (ENSCARG00000006589) ENSCARG00000006435 ENSCARG00000006385 ENSCARG00000006371 ENSCARG00000006342 ENSCARG00000006303 HTR4 (ENSCARG00000006270) SLC26A2 (ENSCARG00000006251) ENSCARG00000006164 thoc3 (ENSCARG00000006099) Goldfish MODERN SPECIES 32 si:dkey-6i22.5 (ENSCARG00000062283) ENSCARG00000062270 med12 (ENSCARG00000062004) MARS2 (ENSCARG00000061972) hspa4b (ENSCARG00000060769) ndfip1 (ENSCARG00000060662) nr3c1 (ENSCARG00000060515) kctd16a (ENSCARG00000060484) ENSCARG00000060458 kif3a (ENSCARG00000060327) il4 (ENSCARG00000060309) ENSCARG00000060304 msx2a (ENSCARG00000060278) cpeb4a (ENSCARG00000060205) stc2a (ENSCARG00000060172) nkx2.5 (ENSCARG00000060156) #22 CHRM1 (ENSCARG00000060139) dpf2l (ENSCARG00000059652) ENSCARG00000059629 KLHL3 (ENSCARG00000058914) fam13b (ENSCARG00000058522) CXCL14 (ENSCARG00000058412) slit3 (ENSCARG00000058217) ENSCARG00000058170 ENSCARG00000058150 cplx2 (ENSCARG00000058129) slc25a48 (ENSCARG00000058076) glra1 (ENSCARG00000057880) g3bp1 (ENSCARG00000057707) sparc (ENSCARG00000057630) atox1 (ENSCARG00000057609) Cyprininae_a ANCESTRAL SPECIES 104 ENSGT00440000037505.b.d.a ENSGT00940000156067.g.b.b ENSGT00390000014316.c.b ENSGT00390000012721.a.j.b.a ENSGT00940000156385.a.a ENSGT00940000156071.a.b.b ENSGT00940000156071.a.a ENSGT00940000155875.m ENSGT00940000156386.f ENSGT00940000156386.e.a ENSGT00990000209953.a ENSGT00940000157037.a.d.a ENSGT00940000164716.A.b ENSGT00940000154998.a.b.k.a ENSGT00390000005989.a.b.b.b ENSGT00940000158996.h #22 ENSGT00390000014412.l #23 ENSGT00940000162301 ENSGT00940000155070.a.b.a.b ENSGT00940000154808.a.b.j.a ENSGT00940000157891.a ENSGT00950000183033.a.b.b.c ENSGT00390000000618.c ENSGT00940000159322.e ENSGT00950000183088.a.a.e ENSGT00950000183137.b.b.d ENSGT01030000235165.a ENSGT00940000153322.B.d.a.t ENSGT00940000155983.a.a.d ENSGT01100000263544.c.a.a.a.b ENSGT00510000048167.b.b.a Common carp reference MODERN SPECIES 35 ENSCCRG00000080121 ENSCCRG00000025589 med12 (ENSCCRG00000079047) hspa4b (ENSCCRG00000011122) gnpda1 (ENSCCRG00000053353) ndfip1 (ENSCCRG00000062030) nr3c1 (ENSCCRG00000011027) kctd16a (ENSCCRG00000031009) ENSCCRG00000082172 kif3a (ENSCCRG00000005867) il4 (ENSCCRG00000062646) ENSCCRG00000060463 msx2a (ENSCCRG00000082142) cpeb4a (ENSCCRG00000071205) stc2a (ENSCCRG00000007402) nkx2.5 (ENSCCRG00000007406) #22 BNIP1 (ENSCCRG00000007411) #23 dpf2l (ENSCCRG00000007368) ENSCCRG00000082153 ENSCCRG00000040735 fam13b (ENSCCRG00000007416) ENSCCRG00000061370 slit3 (ENSCCRG00000062711) ENSCCRG00000010399 ENSCCRG00000010365 ENSCCRG00000010355 ENSCCRG00000005437 ENSCCRG00000050917 ENSCCRG00000059770 ENSCCRG00000075289 ENSCCRG00000075181 Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 249 kif3a (ENSSGRG00000022744) il4 (ENSSGRG00000022741) ENSSGRG00000022739 msx2a (ENSSGRG00000022738) cpeb4a (ENSSGRG00000022676) stc2a (ENSSGRG00000022660) nkx2.5 (ENSSGRG00000022659) #22 BNIP1 (ENSSGRG00000022656) #23 CHRM1 (ENSSGRG00000022655) dpf2l (ENSSGRG00000022654) ENSSGRG00000022653 KLHL3 (ENSSGRG00000022454) fam13b (ENSSGRG00000022297) CXCL14 (ENSSGRG00000022284) slit3 (ENSSGRG00000020690) ENSSGRG00000020649 ENSSGRG00000020647 ENSSGRG00000020645 pde6a (ENSSGRG00000020428) tmem216 (ENSSGRG00000020427) ENSSGRG00000020426 ENSSGRG00000020424 Golden-line barbel MODERN SPECIES 1159 stc2a (ENSSGRG00000022575) nkx2.5 (ENSSGRG00000022570) #22 CHRM1 (ENSSGRG00000022566) dpf2l (ENSSGRG00000022545) hnrnpa0a (ENSSGRG00000022534) KLHL3 (ENSSGRG00000022533) fam13b (ENSSGRG00000022513) cxcl14 (ENSSGRG00000022506) slit3 (ENSSGRG00000021593) Zebrafish DUPLICATION Zebrafish MODERN SPECIES 23 kansl3 (ENSDARG00000029556) bmp1a (ENSDARG00000028071) DISP3 (ENSDARG00000036999) ENSDARG00000063159 rab7b (ENSDARG00000021287) UBL4A (ENSDARG00000007359) b2ml (ENSDARG00000015887) ENSDARG00000078399 bin3 (ENSDARG00000099651) egr3 (ENSDARG00000089156) ENSDARG00000107065 ENSDARG00000106579 RHOBTB2 (ENSDARG00000074828) ido1 (ENSDARG00000033594) stc1 (ENSDARG00000003303) nkx2.7 (ENSDARG00000021232) #22 nkx3-1 (ENSDARG00000078280) slc25a37 (ENSDARG00000073743) entpd4 (ENSDARG00000038422) ENSDARG00000095807 ENSDARG00000095867 ANTXR1 (ENSDARG00000025672) gfpt1 (ENSDARG00000057465) naa35 (ENSDARG00000012378) ENSDARG00000097014 agtpbp1 (ENSDARG00000105214) NTRK2 (ENSDARG00000059897) rmi1 (ENSDARG00000041376) hnrnpk (ENSDARG00000018914) C8H9orf64 (ENSDARG00000041372) gkap1 (ENSDARG00000068123) Zebrafish MODERN SPECIES 5 gnpda1 (ENSDARG00000037307) ndfip1 (ENSDARG00000013979) fgf1a (ENSDARG00000017542) nr3c1 (ENSDARG00000025032) kctd16a (ENSDARG00000004648) ENSDARG00000101178 kif3a (ENSDARG00000087538) il4 (ENSDARG00000087909) ENSDARG00000105377 ENSDARG00000071640 ENSDARG00000110728 msx2a (ENSDARG00000104651) ENSDARG00000105348 cpeb4a (ENSDARG00000056691) stc2a (ENSDARG00000056680) nkx2.5 (ENSDARG00000018004) #22 BNIP1 (ENSDARG00000078259) #23 CHRM1 (ENSDARG00000037292) dpf2l (ENSDARG00000037291) hnrnpa0a (ENSDARG00000089302) KLHL3 (ENSDARG00000056647) fam13b (ENSDARG00000076779) ENSDARG00000078398 cxcl14 (ENSDARG00000056627) slit3 (ENSDARG00000034268) ENSDARG00000002463 ENSDARG00000101569 pde6a (ENSDARG00000000380) tmem216 (ENSDARG00000091576) ENSDARG00000001162 ENSDARG00000000394 Clupeiformes ANCESTRAL SPECIES 222 ENSGT00940000159568 ENSGT00950000183003.a.a.a.a.b.d ENSGT00940000159784 ENSGT00390000004029 ENSGT00940000156067.g.b ENSGT00390000014316.c.b ENSGT00940000165035.a ENSGT00940000156385.a ENSGT00940000156071.a ENSGT00940000160067 ENSGT00940000156386 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.b ENSGT00940000158996 #22 ENSGT00390000014412.l #23 Atlantic herring MODERN SPECIES 12 ENSCHAG00000012405 atp7a (ENSCHAG00000012463) ENSCHAG00000015793 gdf9 (ENSCHAG00000015806) uqcrq (ENSCHAG00000015813) hspa4b (ENSCHAG00000015977) fgf1a (ENSCHAG00000021169) nr3c1 (ENSCHAG00000021359) kctd16a (ENSCHAG00000021424) kif3a (ENSCHAG00000021430) DRD1 (ENSCHAG00000021860) ENSCHAG00000021879 msx2a (ENSCHAG00000021897) cpeb4a (ENSCHAG00000021905) STC2 (ENSCHAG00000022150) nkx2.5 (ENSCHAG00000022155) #22 BNIP1 (ENSCHAG00000022159) #23 ENSCHAG00000022166 dpf2l (ENSCHAG00000022183) pola2 (ENSCHAG00000022279) ENSCHAG00000022688 ENSCHAG00000022699 ENSCHAG00000022704 ENSCHAG00000022799 znhit3 (ENSCHAG00000022807) ENSCHAG00000022815 ENSCHAG00000022830 pola2 (ENSCHAG00000022866) dpf2l (ENSCHAG00000023388) ENSCHAG00000023396 insb (ENSCHAG00000023413) Denticle herring DUPLICATION Denticle herring MODERN SPECIES 11 nme2a (ENSDCDG00000020812) CASKIN2 (ENSDCDG00000020802) st6galnac1.1 (ENSDCDG00000020799) ENSDCDG00000020798 ENSDCDG00000019207 TNNT1 (ENSDCDG00000019119) unk (ENSDCDG00000019093) ENSDCDG00000019083 FDXR (ENSDCDG00000017618) ENSDCDG00000017570 st3gal7 (ENSDCDG00000017558) hps1 (ENSDCDG00000017544) HPSE2 (ENSDCDG00000017533) CNNM1 (ENSDCDG00000017527) got1 (ENSDCDG00000017514) ENSDCDG00000017511 #22 nkx3.3 (ENSDCDG00000017510) slc25a28 (ENSDCDG00000017509) ENSDCDG00000017503 ENSDCDG00000017497 pyroxd2 (ENSDCDG00000017052) zgc:123010 (ENSDCDG00000017041) LOXL4 (ENSDCDG00000016723) CRTAC1 (ENSDCDG00000016710) GOLGA7B (ENSDCDG00000016703) sfrp5 (ENSDCDG00000016702) zgc:171482 (ENSDCDG00000016698) ENSDCDG00000016695 marveld1 (ENSDCDG00000016694) pgam1a (ENSDCDG00000016692) mettl18 (ENSDCDG00000016688) Denticle herring MODERN SPECIES 9 ENSDCDG00000025781 atp7a (ENSDCDG00000023427) ENSDCDG00000023407 uqcrq (ENSDCDG00000023405) hspa4b (ENSDCDG00000022882) gnpda1 (ENSDCDG00000022832) fgf1a (ENSDCDG00000022828) nr3c1 (ENSDCDG00000022825) kctd16a (ENSDCDG00000022819) ENSDCDG00000022817 kif3a (ENSDCDG00000022217) DRD1 (ENSDCDG00000022194) msx2a (ENSDCDG00000022191) cpeb4a (ENSDCDG00000022186) STC2 (ENSDCDG00000022179) nkx2.5 (ENSDCDG00000022178) #22 BNIP1 (ENSDCDG00000022176) #23 WNT8A (ENSDCDG00000022148) ENSDCDG00000022145 ENSDCDG00000022142 ENSDCDG00000022140 ENSDCDG00000022127 adrb2a (ENSDCDG00000022121) il12ba (ENSDCDG00000022083) ENSDCDG00000022080 ENSDCDG00000022077 ENSDCDG00000022075 ENSDCDG00000022061 trpc3 (ENSDCDG00000022039) sh3bgrl (ENSDCDG00000022029) hmgn6 (ENSDCDG00000022026) Euteleosteomorpha ANCESTRAL SPECIES 69 ENSGT00950000182972.a.a.a.a.a.e ENSGT00940000166874 ENSGT00390000010669 ENSGT00940000153404.a ENSGT00940000156381 ENSGT00940000157427.j ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Protacanthopterygii ANCESTRAL SPECIES 19 ENSGT00940000163842 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00940000155650.a.b.d ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00390000007501 ENSGT00940000159538.g.a ENSGT00530000063812.B Northern pike MODERN SPECIES 3 zc4h2 (ENSELUG00000004900) msnb (ENSELUG00000004922) ENSELUG00000004950 EFNB1 (ENSELUG00000004962) STAG2 (ENSELUG00000005041) xiap (ENSELUG00000005096) psmd10 (ENSELUG00000005111) nxt2 (ENSELUG00000005141) acsl4a (ENSELUG00000005166) pin4 (ENSELUG00000005200) nek12 (ENSELUG00000005209) DRD1 (ENSELUG00000005222) msx2a (ENSELUG00000005231) cpeb4a (ENSELUG00000005282) STC2 (ENSELUG00000005311) nkx2.5 (ENSELUG00000005318) #22 BNIP1 (ENSELUG00000005331) #23 atp6v0e1 (ENSELUG00000028768) #25 RL26 (ENSELUG00000024894) ENSELUG00000005413 GPR151 (ENSELUG00000005427) ENSELUG00000005473 thg1l (ENSELUG00000005532) ENSELUG00000005578 dpf2l (ENSELUG00000005633) pola2 (ENSELUG00000005698) ENSELUG00000005721 ENSELUG00000005734 ENSELUG00000000173 ENSELUG00000024387 SLC16A2 (ENSELUG00000005764) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 143 ENSGT00940000153902.b.b.d ENSGT00390000018389.e.b ENSGT01090000260082.d.a.a.c.g ENSGT00940000155516.v.a ENSGT00940000160128.bb.b ENSGT00950000182972.a.a.a.a.a.e.f ENSGT00940000166874.l ENSGT00940000153404.a.rb ENSGT00940000156381.`b ENSGT00940000157427.j ENSGT00510000047029 ENSGT00940000155857.f.a.a ENSGT00940000164716.A.c ENSGT00940000154998.a.b.a.a ENSGT00390000005989.a.b.a.a.a ENSGT00940000158996.m.a #22 ENSGT00390000014412.l.c #23 ENSGT00940000156866.a.a #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b.b.a.b ENSGT01030000234518.A.a.b.h ENSGT00940000159624.g ENSGT00390000011705.u ENSGT00390000011705.v.b ENSGT00390000012944.j ENSGT00940000155650.a.a.e ENSGT00950000182859.A.a.b.b.d.c.a.a.a ENSGT00940000154967.a.a.b ENSGT00390000012630.A.b.c ENSGT00940000155650.a.a.f ENSGT00950000182859.A.a.b.b.d.c.a.a.b Salmoninae_a ANCESTRAL SPECIES 18 ENSGT00390000014513 ENSGT00390000018389.e.a ENSGT01090000260082.d.a.a.c.h ENSGT00940000155516.v.a ENSGT00940000160128.bb.b ENSGT00950000182972.a.a.a.a.a.e.f ENSGT00940000166874.l ENSGT00940000153404.a.rb ENSGT00940000156381.`b ENSGT00940000157427.j ENSGT00510000047029 ENSGT00940000155857.f.a.a ENSGT00940000164716.A.c ENSGT00940000154998.a.b.a.a ENSGT00390000005989.a.b.a.a.a ENSGT00940000158996.m.a #22 ENSGT00390000014412.l.c #23 ENSGT00940000156866.a.a #25 ENSGT00390000014165.i ENSGT00950000182864.a.b.b.a.b.a.b.b.b ENSGT01030000234518.A.a.b.g ENSGT00940000159624.h ENSGT00390000011705.v.a ENSGT00390000012944.i ENSGT00950000183067.a.b.a.d.c ENSGT00940000164576.b.a.a.f ENSGT00940000158603.d ENSGT00940000153203.A.a.c.a.b ENSGT00940000168499.b ENSGT00940000156901.A.d.c ENSGT00940000158334.g.b Salmo ANCESTRAL SPECIES 24 ENSGT00940000155516.v.a ENSGT01100000264539.B ENSGT00940000160128.bb.b ENSGT00950000182972.a.a.a.a.a.e.f ENSGT00940000166874.l ENSGT01080000259752 ENSGT00940000153404.a.rb ENSGT00940000156381.`b ENSGT00940000157427.j ENSGT00510000047029 ENSGT00940000165959.d ENSGT00940000155857.f.a.a ENSGT00940000164716.A.c ENSGT00940000154998.a.b.a.a ENSGT00390000005989.a.b.a.a.a ENSGT00940000158996.m.a #22 ENSGT00390000014412.l.c #23 ENSGT00940000156866.a.a #25 ENSGT00390000014165.i ENSGT00950000182864.a.b.b.a.b.a.b.b.b ENSGT01030000234518.A.a.b.g ENSGT00940000159624.h ENSGT00390000011705.v.a ENSGT00390000012944.i ENSGT00940000155650.a.a.f ENSGT00950000182859.A.a.b.b.d.c.a.a.b ENSGT00390000012630.A.b.d ENSGT00390000007501.e ENSGT00940000159538.g.a.f ENSGT00530000063812.B.c.b ENSGT00950000182850.a.b.a.b.a.b.g.a Atlantic salmon MODERN SPECIES 24 ENSSSAG00000099939 ENSSSAG00000110862 ENSSSAG00000115237 ENSSSAG00000069267 xiap (ENSSSAG00000076298) ENSSSAG00000076300 psd10 (ENSSSAG00000076301) NXT2 (ENSSSAG00000076566) acsl4a (ENSSSAG00000076315) pin4 (ENSSSAG00000092444) ENSSSAG00000088550 ENSSSAG00000076628 msx2a (ENSSSAG00000118332) cpeb4a (ENSSSAG00000076649) ENSSSAG00000114367 nkx2.5 (ENSSSAG00000088975) #22 ENSSSAG00000076705 #23 rl26 (ENSSSAG00000076707) ENSSSAG00000119445 ENSSSAG00000099093 ENSSSAG00000070677 ENSSSAG00000112575 ENSSSAG00000044766 ENSSSAG00000068905 lsm11 (ENSSSAG00000068908) ENSSSAG00000068917 EBF1 (ENSSSAG00000115078) ENSSSAG00000068948 efcab9 (ENSSSAG00000068958) ENSSSAG00000119290 SH3TC2 (ENSSSAG00000044258) River trout MODERN SPECIES 22 zc4h2 (ENSSTUG00000000123) cuedc2 (ENSSTUG00000000133) ENSSTUG00000000144 ENSSTUG00000000160 ENSSTUG00000000164 STAG2 (ENSSTUG00000000222) xiap (ENSSTUG00000000451) ENSSTUG00000000458 psmd10 (ENSSTUG00000000460) nxt2 (ENSSTUG00000000470) acsl4a (ENSSTUG00000000500) pin4 (ENSSTUG00000000539) msx2a (ENSSTUG00000000563) cpeb4a (ENSSTUG00000000569) STC2 (ENSSTUG00000000580) nkx2.5 (ENSSTUG00000000583) #22 BNIP1 (ENSSTUG00000000585) #23 atp6v0e1 (ENSSTUG00000000589) #25 rpl26 (ENSSTUG00000000591) ENSSTUG00000000598 GPR151 (ENSSTUG00000000621) ENSSTUG00000000666 thg1l (ENSSTUG00000000985) LSM11 (ENSSTUG00000001012) clint1a (ENSSTUG00000001024) ENSSTUG00000001066 EBF1 (ENSSTUG00000001083) ENSSTUG00000001134 il12ba (ENSSTUG00000001143) EFCAB9 (ENSSTUG00000001251) adrb2a (ENSSTUG00000001260) Oncorhynchus ANCESTRAL SPECIES 45 ENSGT00390000014513 ENSGT00390000018389.e.a ENSGT01090000260082.d.a.a.c.h ENSGT00940000155516.v.a ENSGT00940000160128.bb.b ENSGT00950000182972.a.a.a.a.a.e.f ENSGT00940000166874.l ENSGT00940000153404.a.rb ENSGT00940000156381.`b ENSGT00940000157427.j ENSGT00510000047029 ENSGT00940000155857.f.a.a ENSGT00940000164716.A.c ENSGT00940000154998.a.b.a.a ENSGT00390000005989.a.b.a.a.a ENSGT00940000158996.m.a #22 ENSGT00390000014412.l.c #23 ENSGT00940000156866.a.a #25 ENSGT00390000014165.i ENSGT00950000182864.a.b.b.a.b.a.b.b.b ENSGT01030000234518.A.a.b.g ENSGT00940000159624.h.b ENSGT00390000012944.i ENSGT00940000155650.a.a.f ENSGT00950000182859.A.a.b.b.d.c.a.a.b ENSGT00390000012630.A.b.d ENSGT00390000007501 ENSGT00940000159538.g.a.f ENSGT00530000063812.B.c.b ENSGT00950000182850.a.b.a.b.a.b.h.a ENSGT00950000183067.a.b.a.d.c Oncorhynchus_a ANCESTRAL SPECIES 46 ENSGT00390000014513 ENSGT00390000018389.e.a ENSGT01090000260082.d.a.a.c.h ENSGT00940000155516.v.a ENSGT00940000160128.bb.b ENSGT00950000182972.a.a.a.a.a.e.f ENSGT00940000166874.l ENSGT00940000153404.a.rb ENSGT00940000156381.`b ENSGT00940000157427.j ENSGT00510000047029 ENSGT00940000155857.f.a.a ENSGT00940000164716.A.c ENSGT00940000154998.a.b.a.a ENSGT00390000005989.a.b.a.a.a ENSGT00940000158996.m.a #22 ENSGT00390000014412.l.c #23 ENSGT00940000156866.a.a #25 ENSGT00390000014165.i ENSGT00950000182864.a.b.b.a.b.a.b.b.a.b ENSGT01030000234518.A.a.b.g ENSGT00940000159624.h.b ENSGT00390000012944.i ENSGT00940000155650.a.a.f ENSGT00950000183067.a.b.a.d.c ENSGT00940000164576.b.a.a.f ENSGT00940000158603.d ENSGT00940000153203.A.a.c.a.b ENSGT00940000156901.A.d.c ENSGT00940000158334.g.b ENSGT00940000165206.d.a Chinook salmon MODERN SPECIES 13 ENSOTSG00005038715 il12ba (ENSOTSG00005038709) ENSOTSG00005038706 ENSOTSG00005038700 cpo (ENSOTSG00005038693) cpo (ENSOTSG00005038691) nudt15 (ENSOTSG00005038688) ENSOTSG00005038687 ENSOTSG00005038686 UBE3A (ENSOTSG00005038170) TMEM131 (ENSOTSG00005038165) DRD1 (ENSOTSG00005038164) msx2a (ENSOTSG00005038163) ENSOTSG00005038125 STC2 (ENSOTSG00005038121) nkx2.5 (ENSOTSG00005038119) #22 BNIP1 (ENSOTSG00005038118) #23 rpl26 (ENSOTSG00005038116) hbegfa (ENSOTSG00005038114) ENSOTSG00005037933 hnrnph1 (ENSOTSG00005037927) cyfip2 (ENSOTSG00005037429) ENSOTSG00005037380 ENSOTSG00005037378 ENSOTSG00005037377 ENSOTSG00005037376 MFAP4 (ENSOTSG00005037375) brd8b (ENSOTSG00005037374) ENSOTSG00005037371 sting1 (ENSOTSG00005037369) ENSOTSG00005037368 Coho salmon MODERN SPECIES 10 cuedc2 (ENSOKIG00005049057) zc4h2 (ENSOKIG00005049044) ENSOKIG00005048739 ENSOKIG00005048692 EFNB1 (ENSOKIG00005048682) STAG2 (ENSOKIG00005044046) xiap (ENSOKIG00005043463) psmd10 (ENSOKIG00005043453) nxt2 (ENSOKIG00005043374) acsl4a (ENSOKIG00005041898) pin4 (ENSOKIG00005041819) DRD1 (ENSOKIG00005041812) msx2a (ENSOKIG00005041806) cpeb4a (ENSOKIG00005041790) STC2 (ENSOKIG00005041772) nkx2.5 (ENSOKIG00005041764) #22 BNIP1 (ENSOKIG00005041757) #23 atp6v0e1 (ENSOKIG00005041743) #25 rpl26 (ENSOKIG00005041732) ENSOKIG00005041725 ENSOKIG00005041714 GPR151 (ENSOKIG00005041698) ENSOKIG00005041385 ENSOKIG00005041247 LSM11 (ENSOKIG00005041226) CLINT1 (ENSOKIG00005040748) EBF1 (ENSOKIG00005040636) ENSOKIG00005040602 ENSOKIG00005040566 ADRB2 (ENSOKIG00005040557) ENSOKIG00005040534 Rainbow trout MODERN SPECIES 5 ENSOMYG00000065352 ENSOMYG00000067433 ENSOMYG00000020974 ENSOMYG00000067982 ENSOMYG00000019567 xiap (ENSOMYG00000019258) psmd10 (ENSOMYG00000019245) nxt2 (ENSOMYG00000019234) acsl4a (ENSOMYG00000015406) pin4 (ENSOMYG00000015128) ENSOMYG00000015067 msx2a (ENSOMYG00000015061) ENSOMYG00000049259 cpeb4a (ENSOMYG00000014504) STC2 (ENSOMYG00000043490) nkx2.5 (ENSOMYG00000012307) #22 BNIP1 (ENSOMYG00000012295) #23 VA0H (ENSOMYG00000054088) #25 rpl26 (ENSOMYG00000012270) ENSOMYG00000053239 ENSOMYG00000019500 ENSOMYG00000064582 ENSOMYG00000047910 ENSOMYG00000061851 ENSOMYG00000067774 LSM11 (ENSOMYG00000015096) ENSOMYG00000066391 EBF1 (ENSOMYG00000015081) ENSOMYG00000015114 ENSOMYG00000076178 ENSOMYG00000050866 Huchen MODERN SPECIES 822 ENSHHUG00000031119 STAG2 (ENSHHUG00000031139) xiap (ENSHHUG00000031592) psmd10 (ENSHHUG00000031599) pin4 (ENSHHUG00000031614) acsl4a (ENSHHUG00000031616) nxt2 (ENSHHUG00000031666) DRD1 (ENSHHUG00000031724) msx2a (ENSHHUG00000031726) ENSHHUG00000031730 ENSHHUG00000031849 nkx2.5 (ENSHHUG00000031853) #22 BNIP1 (ENSHHUG00000031856) #23 atp6v0e1 (ENSHHUG00000031859) #25 rpl26 (ENSHHUG00000031876) ENSHHUG00000031880 Salmoninae ANCESTRAL SPECIES 658 ENSGT00940000166874.k ENSGT00390000010669 ENSGT00940000153404.a.sb ENSGT00940000156381.ab ENSGT00940000163842 ENSGT00940000165959 ENSGT00940000155857.f.a.b ENSGT00940000164716.A.d ENSGT00940000154998.a.b.a.b ENSGT00390000005989.a.b.a.a.b ENSGT00940000158996.m.b #22 ENSGT00390000014412.l.d #23 ENSGT00940000156866.a.b #25 Salmoninae_a ANCESTRAL SPECIES 41 ENSGT00390000018389.e.b ENSGT01090000260082.d.a.a.c.g ENSGT00940000155516.v.b ENSGT00940000160128.bb.a ENSGT00950000182972.a.a.a.a.a.e.e ENSGT00940000166874.k ENSGT00390000010669 ENSGT00940000153404.a.sb ENSGT00940000156381.ab ENSGT00940000163842 ENSGT00940000165959 ENSGT00940000155857.f.a.b ENSGT00940000164716.A.d ENSGT00940000154998.a.b.a.b ENSGT00390000005989.a.b.a.a.b ENSGT00940000158996.m.b #22 ENSGT00390000014412.l.d #23 ENSGT00940000156866.a.b #25 ENSGT00390000014165.j ENSGT00950000182864.a.b.b.a.b.a.b.b.a.b ENSGT01030000234518.A.a.b.h ENSGT00940000159624.g ENSGT00390000011705.u ENSGT00390000011705.v.b ENSGT00390000012944.j ENSGT00940000155650.a.a.e ENSGT00950000182859.A.a.b.b.d.c.a.a.a ENSGT00940000154967.a.a.b ENSGT00390000012630.A.b.c ENSGT00940000155650.a.a.f ENSGT00950000182859.A.a.b.b.d.c.a.a.b Salmo ANCESTRAL SPECIES 47 ENSGT00390000018389.e.b ENSGT01090000260082.d.a.a.c.g ENSGT00940000155516.v.b ENSGT00940000160128.bb.a ENSGT00950000182972.a.a.a.a.a.e.e ENSGT00940000166874.k ENSGT00390000010669 ENSGT00940000153404.a.sb ENSGT00940000156381.ab ENSGT00940000163842 ENSGT00940000165959.c ENSGT00940000155857.f.a.b ENSGT00940000164716.A.d ENSGT00940000154998.a.b.a.b ENSGT00390000005989.a.b.a.a.b ENSGT00940000158996.m.b #22 ENSGT00390000014412.l.d #23 ENSGT00940000156866.a.b #25 ENSGT00390000014165.j ENSGT00950000182864.a.b.b.a.b.a.b.b.a.b ENSGT01030000234518.A.a.b.h ENSGT00940000159624.g ENSGT00390000011705.u ENSGT00390000012944.j ENSGT00940000155650.a.a.e ENSGT00950000182859.A.a.b.b.d.c.a.a.a ENSGT00940000154967.a.a.b ENSGT00390000012630.A.b.c ENSGT00390000007501.f ENSGT00940000159538.g.a.e ENSGT00530000063812.B.c.a River trout MODERN SPECIES 4 ENSSTUG00000006025 ENSSTUG00000006008 ENSSTUG00000006000 EFNB1 (ENSSTUG00000005995) STAG2 (ENSSTUG00000001914) xiap (ENSSTUG00000001715) ENSSTUG00000001714 psmd10 (ENSSTUG00000001508) nxt2 (ENSSTUG00000001036) nek12 (ENSSTUG00000046262) DRD1 (ENSSTUG00000046258) msx2a (ENSSTUG00000046254) cpeb4a (ENSSTUG00000046175) ENSSTUG00000046170 STC2 (ENSSTUG00000046164) nkx2.5 (ENSSTUG00000046160) #22 BNIP1 (ENSSTUG00000046155) #23 atp6v0e1 (ENSSTUG00000046147) #25 rpl26 (ENSSTUG00000046141) ENSSTUG00000046137 GPR151 (ENSSTUG00000046133) ENSSTUG00000046049 ENSSTUG00000046037 ENSSTUG00000046032 ENSSTUG00000046030 ENSSTUG00000045961 ENSSTUG00000045947 il12ba (ENSSTUG00000045936) ENSSTUG00000045926 adrb2a (ENSSTUG00000045922) ENSSTUG00000045920 Atlantic salmon MODERN SPECIES 28 ENSSSAG00000055814 ENSSSAG00000119299 ENSSSAG00000120857 ENSSSAG00000088598 ENSSSAG00000120021 ENSSSAG00000046041 BIRC4 (ENSSSAG00000045850) psmd10 (ENSSSAG00000096505) nxt2 (ENSSSAG00000045749) ENSSSAG00000083554 ENSSSAG00000045734 ENSSSAG00000045727 msx2 (ENSSSAG00000045720) cpeb4a (ENSSSAG00000045556) ENSSSAG00000093108 nkx2.5 (ENSSSAG00000045527) #22 BNIP1 (ENSSSAG00000084179) #23 ENSSSAG00000100909 atp6v0e1 (ENSSSAG00000045502) #25 rpl26 (ENSSSAG00000045463) ENSSSAG00000104483 ENSSSAG00000044973 ENSSSAG00000087715 ENSSSAG00000044706 LSM11 (ENSSSAG00000044648) ENSSSAG00000044622 EBF1 (ENSSSAG00000041858) ENSSSAG00000041836 il12ba (ENSSSAG00000041830) ENSSSAG00000098102 ENSSSAG00000041803 Oncorhynchus ANCESTRAL SPECIES 34 ENSGT00980000202377 ENSGT00390000018389.f ENSGT01090000260082.d.a.a.c.g ENSGT00940000155516.v.b ENSGT01010000223808.a.a.a ENSGT00940000160128.bb.a ENSGT00950000182972.a.a.a.a.a.e.e ENSGT00940000166874.k ENSGT00390000010669 ENSGT00940000156381.ab ENSGT00940000165959 ENSGT00940000155857.f.a.b ENSGT00940000164716.A.d ENSGT00940000154998.a.b.a.b ENSGT00390000005989.a.b.a.a.b ENSGT00940000158996.m.b #22 ENSGT00390000014412.l.d #23 ENSGT00940000156866.a.b #25 ENSGT00390000014165.j ENSGT00950000182864.a.b.b.a.b.a.b.b.a.b ENSGT01030000234518.A.a.b.h ENSGT00940000159624.g ENSGT00390000011705.v.a ENSGT00940000155650.a.a.e ENSGT00950000182859.A.a.b.b.d.c.a.b.b ENSGT00940000154967.a.a.b.i ENSGT00390000012630.A.b.c ENSGT00940000159538.g.a.e ENSGT00530000063812.B.c.a ENSGT00950000182850.a.b.a.b.a.b.h.b ENSGT00950000183067.a.b.a.d.d Oncorhynchus_a ANCESTRAL SPECIES 34 ENSGT00980000202377 ENSGT00390000018389.f ENSGT01090000260082.d.a.a.c.g ENSGT00940000155516.v.b ENSGT01010000223808.a.a.a ENSGT00940000160128.bb.a ENSGT00950000182972.a.a.a.a.a.e.e ENSGT00940000166874.k ENSGT00390000010669 ENSGT00940000156381.ab ENSGT00940000165959 ENSGT00940000155857.f.a.b ENSGT00940000164716.A.d ENSGT00940000154998.a.b.a.b ENSGT00390000005989.a.b.a.a.b ENSGT00940000158996.m.b #22 ENSGT00390000014412.l.d #23 ENSGT00940000156866.a.b #25 ENSGT00390000014165.j ENSGT01030000234518.A.a.b.h ENSGT00940000159624.g ENSGT00390000011705.v.a ENSGT00940000155650.a.a.e ENSGT00950000182859.A.a.b.b.d.c.a.b.b ENSGT00940000154967.a.a.b.i ENSGT00390000012630.A.b.c ENSGT00940000159538.g.a.e ENSGT00530000063812.B.c.a ENSGT00950000182850.a.b.a.b.a.b.h.b ENSGT00950000183067.a.b.a.d.d ENSGT00940000166663 Chinook salmon MODERN SPECIES 32 fut11 (ENSOTSG00005002603) RAB9B (ENSOTSG00005002611) plp1a (ENSOTSG00005002628) ENSOTSG00005002630 ENSOTSG00005002631 ENSOTSG00005002633 asb12b (ENSOTSG00005002637) STAG2 (ENSOTSG00005002639) xiap (ENSOTSG00005002643) ENSOTSG00005002645 nek12 (ENSOTSG00005002648) DRD1 (ENSOTSG00005002652) msx2a (ENSOTSG00005002661) ENSOTSG00005002664 STC2 (ENSOTSG00005002668) nkx2.5 (ENSOTSG00005002669) #22 BNIP1 (ENSOTSG00005002670) #23 atp6v0e1 (ENSOTSG00005002673) #25 rpl26 (ENSOTSG00005002674) GPR151 (ENSOTSG00005002676) cyfip2 (ENSOTSG00005002706) hmmr (ENSOTSG00005003009) ENSOTSG00005003013 nrg2b (ENSOTSG00005003015) ENSOTSG00005003025 ctsf (ENSOTSG00005003036) ENSOTSG00005003249 ATG2A (ENSOTSG00005003283) trmt112 (ENSOTSG00005003674) ENSOTSG00005003675 KCNK4 (ENSOTSG00005003677) Coho salmon MODERN SPECIES 6 ENSOKIG00005037703 ENSOKIG00005037724 EFNB1 (ENSOKIG00005037739) ENSOKIG00005037815 STAG2 (ENSOKIG00005038064) xiap (ENSOKIG00005041434) ENSOKIG00005041460 ENSOKIG00005041469 nxt2 (ENSOKIG00005041480) nek12 (ENSOKIG00005041508) DRD1 (ENSOKIG00005041522) msx2a (ENSOKIG00005041567) cpeb4a (ENSOKIG00005041606) ENSOKIG00005041750 STC2 (ENSOKIG00005041766) nkx2.5 (ENSOKIG00005025165) #22 BNIP1 (ENSOKIG00005025175) #23 atp6v0e1 (ENSOKIG00005025201) #25 rpl26 (ENSOKIG00005025221) GPR151 (ENSOKIG00005025245) ENSOKIG00005025343 thg1l (ENSOKIG00005026021) ENSOKIG00005026030 ENSOKIG00005026042 ENSOKIG00005026048 ENSOKIG00005026058 ENSOKIG00005026069 ENSOKIG00005026091 il12ba (ENSOKIG00005026108) adrb2a (ENSOKIG00005026111) SH3TC2 (ENSOKIG00005026136) Rainbow trout MODERN SPECIES 23 ENSOMYG00000076846 ENSOMYG00000050004 ENSOMYG00000059205 ENSOMYG00000072968 ENSOMYG00000071045 ENSOMYG00000043447 ENSOMYG00000043451 ENSOMYG00000043461 ENSOMYG00000043463 ENSOMYG00000075618 ENSOMYG00000053428 msx2a (ENSOMYG00000077193) cpeb4a (ENSOMYG00000075511) ENSOMYG00000060076 STC2 (ENSOMYG00000067176) nkx2.5 (ENSOMYG00000043495) #22 BNIP1 (ENSOMYG00000043498) #23 atp6v0e1 (ENSOMYG00000061869) #25 rpl26 (ENSOMYG00000043506) ENSOMYG00000025217 ENSOMYG00000074061 ENSOMYG00000019485 ENSOMYG00000019494 ENSOMYG00000066045 ENSOMYG00000019519 LSM11 (ENSOMYG00000019530) ENSOMYG00000064299 ENSOMYG00000056049 ENSOMYG00000063906 EBF1 (ENSOMYG00000060398) ENSOMYG00000072987 Huchen MODERN SPECIES 4895 STC2 (ENSHHUG00000015264) nkx2.5 (ENSHHUG00000015260) #22 BNIP1 (ENSHHUG00000015257) #23 atp6v0e1 (ENSHHUG00000015242) #25 rpl26 (ENSHHUG00000015188) Salmoninae ANCESTRAL SPECIES 17 ENSGT00940000164785 ENSGT00940000158488.a ENSGT00940000156522.c.a.c ENSGT00390000007636.m ENSGT00940000157176.a.b ENSGT00940000157931.g ENSGT00940000165180.e ENSGT00940000155864.b.c.b ENSGT00730000111022.u ENSGT00940000166050.j ENSGT00950000182882.B.d ENSGT00940000160355.g ENSGT00940000158918.b ENSGT00940000164380.a.f ENSGT00390000005989.b.a.e ENSGT00940000158996.n #22 ENSGT00940000165452.b ENSGT00940000160930 ENSGT00940000158607.s ENSGT01100000263540.B.d.i ENSGT00720000108860.h ENSGT00940000160296.g ENSGT00940000155860.a.c ENSGT00940000160547 ENSGT00760000119772 ENSGT00940000154314.b.f ENSGT00940000155782.j.a ENSGT00940000164226.a.a.d ENSGT00940000159598 ENSGT00940000164254.a.a.d ENSGT00390000008529.r Salmoninae_a ANCESTRAL SPECIES 31 ENSGT00940000164785 ENSGT00940000158488.a ENSGT00940000156522.c.a.c ENSGT00390000007636.m ENSGT00940000157176.a.b ENSGT00940000157931.g ENSGT00940000165180.e ENSGT00940000155864.b.c.b ENSGT00730000111022.u ENSGT00940000166050.j ENSGT00950000182882.B.d ENSGT00940000160355.g ENSGT00940000158918.b ENSGT00940000164380.a.f ENSGT00390000005989.b.a.e ENSGT00940000158996.n #22 ENSGT00940000165452.b ENSGT00940000158607.s ENSGT01100000263540.B.d.i ENSGT00720000108860.h ENSGT00940000160296.g ENSGT00940000155860.a.c ENSGT00940000160547 ENSGT00760000119772 ENSGT00940000154314.b.f ENSGT00940000155782.j.a ENSGT00940000164226.a.a.d ENSGT00940000159598 ENSGT00940000164254.a.a.d ENSGT00390000008529.r ENSGT00940000156208.j.c Salmo ANCESTRAL SPECIES 19 ENSGT00940000164785 ENSGT00940000158488.a ENSGT00940000156522.c.a.c ENSGT00390000007636.m ENSGT00940000157176.a.b ENSGT00940000157931.g ENSGT00940000165180.e ENSGT00940000155864.b.c.b ENSGT00730000111022.u ENSGT00940000166050.j ENSGT00950000182882.B.d ENSGT00940000160355.g ENSGT00940000158918.b ENSGT00940000164380.a.f ENSGT00390000005989.b.a.e ENSGT00940000158996.n #22 ENSGT00940000165452.b.b ENSGT00940000158607.s ENSGT01100000263540.B.d.i ENSGT00720000108860.h ENSGT00940000160296.g ENSGT00940000155860.a.c ENSGT00940000160547 ENSGT00760000119772 ENSGT00940000154314.b.f ENSGT00940000155782.j.a ENSGT00940000164226.a.a.d ENSGT00940000159598 ENSGT00940000164254.a.a.d ENSGT00390000008529.r ENSGT00940000156208.j.c River trout MODERN SPECIES 39 nfu1 (ENSSTUG00000035112) gfpt1 (ENSSTUG00000034072) ANTXR1 (ENSSTUG00000033151) kansl3 (ENSSTUG00000032704) bmp1a (ENSSTUG00000026747) DISP3 (ENSSTUG00000026505) ENSSTUG00000026142 rab7b (ENSSTUG00000026009) zgc:56596 (ENSSTUG00000025993) ENSSTUG00000024021 BIN3 (ENSSTUG00000023941) egr3 (ENSSTUG00000023921) RHOBTB2 (ENSSTUG00000023798) ido1 (ENSSTUG00000023763) stc1 (ENSSTUG00000023746) nkx2.7 (ENSSTUG00000023743) #22 ENSSTUG00000023730 slc25a37 (ENSSTUG00000023718) entpd4 (ENSSTUG00000023709) chmp7 (ENSSTUG00000023664) lgi3 (ENSSTUG00000023626) fgfr1a (ENSSTUG00000016883) ankrd39 (ENSSTUG00000016770) ENSSTUG00000016764 kctd9a (ENSSTUG00000016543) ENSSTUG00000016442 npy8br (ENSSTUG00000016434) KLHL22 (ENSSTUG00000016421) tbx16 (ENSSTUG00000016384) ENSSTUG00000016368 NEFL (ENSSTUG00000016289) Atlantic salmon MODERN SPECIES 12 ANTXR1 (ENSSSAG00000067942) kansl3 (ENSSSAG00000067840) bmp1a (ENSSSAG00000051412) ptchd2 (ENSSSAG00000050283) ENSSSAG00000049837 rab7b (ENSSSAG00000049695) ubl4ab (ENSSSAG00000049676) ENSSSAG00000046101 ENSSSAG00000122136 ENSSSAG00000121733 egr3 (ENSSSAG00000045986) ENSSSAG00000045340 ENSSSAG00000045317 ido1 (ENSSSAG00000045206) stc1 (ENSSSAG00000117825) nkx2-6 (ENSSSAG00000045151) #22 nkx3-1 (ENSSSAG00000045126) slc25a37 (ENSSSAG00000112058) entpd4 (ENSSSAG00000097847) chmp7 (ENSSSAG00000057812) lgi3 (ENSSSAG00000057910) fgfr1a (ENSSSAG00000078471) ankrd39 (ENSSSAG00000078173) kctd9a (ENSSSAG00000078159) ENSSSAG00000078142 npy8br (ENSSSAG00000121556) tbx16 (ENSSSAG00000118384) ENSSSAG00000078132 ENSSSAG00000078116 nefl (ENSSSAG00000078107) dock5 (ENSSSAG00000073704) Oncorhynchus ANCESTRAL SPECIES 12 ENSGT00940000164785 ENSGT00940000158488.a ENSGT00940000156522.c.a.c ENSGT00390000007636.m ENSGT00940000157176.a.b ENSGT00940000157931.g ENSGT00940000165180.e ENSGT00940000155864.b.c.b ENSGT00730000111022.u ENSGT00940000166050.j ENSGT00950000182882.B.d ENSGT00940000160355.g ENSGT00940000158918.b ENSGT00940000164380.a.f ENSGT00390000005989.b.a.e ENSGT00940000158996.n #22 ENSGT00940000165452.b ENSGT00940000158607.s ENSGT01100000263540.B.d.i ENSGT00720000108860.h ENSGT00940000160296.g ENSGT00940000155860.a.c ENSGT00940000160547 ENSGT00760000119772 ENSGT00940000154314.b.f ENSGT00940000155782.j.a ENSGT00940000164226.a.a.d ENSGT00940000159598 ENSGT00940000164254.a.a.d ENSGT00390000008529.r ENSGT00940000156208.j.c Oncorhynchus_a ANCESTRAL SPECIES 15 ENSGT00940000164785 ENSGT00940000158488.a ENSGT00940000156522.c.a.c ENSGT00390000007636.m ENSGT00940000157176.a.b ENSGT00940000157931.g ENSGT00940000165180.e ENSGT00940000155864.b.c.b ENSGT00730000111022.u ENSGT00940000166050.j ENSGT00950000182882.B.d ENSGT00940000160355.g ENSGT00940000158918.b ENSGT00940000164380.a.f ENSGT00390000005989.b.a.e ENSGT00940000158996.n #22 ENSGT00940000165452.b ENSGT00940000158607.s ENSGT01100000263540.B.d.i ENSGT00720000108860.h ENSGT00940000160296.g ENSGT00940000155860.a.c ENSGT00940000160547 ENSGT00760000119772 ENSGT00940000154314.b.f ENSGT00940000155782.j.a ENSGT00940000164226.a.a.d ENSGT00940000159598 ENSGT00940000164254.a.a.d ENSGT00390000008529.r ENSGT00940000156208.j.c Chinook salmon MODERN SPECIES 3 nfu1 (ENSOTSG00005031901) gfpt1 (ENSOTSG00005031905) ANTXR1 (ENSOTSG00005032116) kansl3 (ENSOTSG00005032485) bmp1a (ENSOTSG00005032574) DISP3 (ENSOTSG00005042325) ENSOTSG00005042335 zgc:100918 (ENSOTSG00005042466) zgc:56596 (ENSOTSG00005042467) ENSOTSG00005042477 BIN3 (ENSOTSG00005043068) egr3 (ENSOTSG00005043071) RHOBTB2 (ENSOTSG00005043072) ido1 (ENSOTSG00005043117) stc1 (ENSOTSG00005043121) nkx2.7 (ENSOTSG00005043122) #22 ENSOTSG00005043124 slc25a37 (ENSOTSG00005043125) entpd4 (ENSOTSG00005043127) chmp7 (ENSOTSG00005043133) lgi3 (ENSOTSG00005043137) fgfr1a (ENSOTSG00005043158) ankrd39 (ENSOTSG00005045304) ENSOTSG00005045305 kctd9a (ENSOTSG00005045306) ENSOTSG00005045307 npy8br (ENSOTSG00005045308) KLHL22 (ENSOTSG00005045309) ENSOTSG00005045310 tbx16 (ENSOTSG00005045311) ENSOTSG00005045312 Coho salmon MODERN SPECIES 28 ANTXR1 (ENSOKIG00005010508) kansl3 (ENSOKIG00005011681) bmp1a (ENSOKIG00005012309) DISP3 (ENSOKIG00005017566) ENSOKIG00005017610 rab7b (ENSOKIG00005017868) zgc:56596 (ENSOKIG00005017876) ENSOKIG00005017952 BIN3 (ENSOKIG00005018623) egr3 (ENSOKIG00005018633) ENSOKIG00005018641 RHOBTB2 (ENSOKIG00005018654) ido1 (ENSOKIG00005018702) ENSOKIG00005018725 stc1 (ENSOKIG00005018731) nkx2.7 (ENSOKIG00005018740) #22 ENSOKIG00005018746 slc25a37 (ENSOKIG00005018755) entpd4 (ENSOKIG00005018792) chmp7 (ENSOKIG00005019413) lgi3 (ENSOKIG00005019484) fgfr1a (ENSOKIG00005019923) ankrd39 (ENSOKIG00005030726) ENSOKIG00005030754 kctd9a (ENSOKIG00005030850) ENSOKIG00005031037 ENSOKIG00005031129 npy8br (ENSOKIG00005031136) KLHL22 (ENSOKIG00005031146) tbx16 (ENSOKIG00005031156) ENSOKIG00005031233 Rainbow trout MODERN SPECIES 2 ENSOMYG00000073752 kansl3 (ENSOMYG00000006865) bmp1a (ENSOMYG00000006062) ENSOMYG00000004726 ENSOMYG00000004481 rab7b (ENSOMYG00000004240) zgc:56596 (ENSOMYG00000004190) ENSOMYG00000024240 ENSOMYG00000047846 ENSOMYG00000003942 ENSOMYG00000003450 egr3 (ENSOMYG00000003397) ENSOMYG00000003254 ido1 (ENSOMYG00000043935) stc1 (ENSOMYG00000043903) nkx2.7 (ENSOMYG00000043899) #22 ENSOMYG00000043894 slc25a37 (ENSOMYG00000043888) ENSOMYG00000075229 entpd4 (ENSOMYG00000043655) chmp7 (ENSOMYG00000043567) lgi3 (ENSOMYG00000043539) fgfr1a (ENSOMYG00000031327) ankrd39 (ENSOMYG00000028848) ENSOMYG00000028826 kctd9a (ENSOMYG00000028718) ENSOMYG00000028599 npy8br (ENSOMYG00000028572) ENSOMYG00000028561 ENSOMYG00000028543 tbx16 (ENSOMYG00000028492) Huchen MODERN SPECIES 78 ANTXR1 (ENSHHUG00000045738) kansl3 (ENSHHUG00000045756) bmp1a (ENSHHUG00000045824) DISP3 (ENSHHUG00000047214) ENSHHUG00000047228 rab7b (ENSHHUG00000047265) zgc:56596 (ENSHHUG00000047333) ENSHHUG00000047345 BIN3 (ENSHHUG00000047511) egr3 (ENSHHUG00000047519) RHOBTB2 (ENSHHUG00000047524) ido1 (ENSHHUG00000047532) stc1 (ENSHHUG00000047550) nkx2.7 (ENSHHUG00000047553) #22 nkx3-1 (ENSHHUG00000047555) slc25a37 (ENSHHUG00000047558) entpd4 (ENSHHUG00000047561) chmp7 (ENSHHUG00000047563) lgi3 (ENSHHUG00000047566) fgfr1a (ENSHHUG00000047584) ankrd39 (ENSHHUG00000051113) ENSHHUG00000051117 kctd9a (ENSHHUG00000051120) ACTR1A (ENSHHUG00000051127) npy8br (ENSHHUG00000051149) KLHL22 (ENSHHUG00000051158) tbx16 (ENSHHUG00000051166) ENSHHUG00000051179 NEFL (ENSHHUG00000051196) Acanthomorphata ANCESTRAL SPECIES 1 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000161160 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Cod MODERN SPECIES 1 ENSGMOG00000018754 ENSGMOG00000033146 aurkb (ENSGMOG00000018737) ENSGMOG00000025527 ENSGMOG00000018730 nkx3-2 (ENSGMOG00000026159) ENSGMOG00000034110 RAB28 (ENSGMOG00000018715) HS3ST1 (ENSGMOG00000019948) ENSGMOG00000036954 ENSGMOG00000031231 ENSGMOG00000015277 ENSGMOG00000027663 cpeb4a (ENSGMOG00000023337) ENSGMOG00000015364 NKX2-5 (ENSGMOG00000015370) #22 BNIP1 (ENSGMOG00000036420) #23 atp6v0e1 (ENSGMOG00000029150) #25 rpl26 (ENSGMOG00000015401) ENSGMOG00000018383 ENSGMOG00000015432 ENSGMOG00000015440 ENSGMOG00000015482 LSM11 (ENSGMOG00000015497) clint1a (ENSGMOG00000036912) ebf3a (ENSGMOG00000015541) ENSGMOG00000015572 ENSGMOG00000032788 adrb2a (ENSGMOG00000001811) SH3TC2 (ENSGMOG00000001820) ablim3 (ENSGMOG00000001852) Euacanthomorphacea ANCESTRAL SPECIES 10 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Pinecone sodierfish MODERN SPECIES 1 tspan17 (ENSMMDG00005023219) ENSMMDG00005023215 LRRTM2 (ENSMMDG00005023208) ctnna1 (ENSMMDG00005022843) sncb (ENSMMDG00005022825) ENSMMDG00005022822 ENSMMDG00005022821 rnf44 (ENSMMDG00005022819) faf2 (ENSMMDG00005022785) pin4 (ENSMMDG00005022774) nek12 (ENSMMDG00005022771) DRD1 (ENSMMDG00005022768) msx2a (ENSMMDG00005022766) cpeb4a (ENSMMDG00005022749) STC2 (ENSMMDG00005022744) nkx2.5 (ENSMMDG00005022739) #22 BNIP1 (ENSMMDG00005022734) #23 atp6v0e1 (ENSMMDG00005022732) #25 rpl26 (ENSMMDG00005022729) ENSMMDG00005022719 GPR151 (ENSMMDG00005022716) ADAM19 (ENSMMDG00005022706) thg1l (ENSMMDG00005022704) thg1l (ENSMMDG00005022703) LSM11 (ENSMMDG00005022701) clint1a (ENSMMDG00005022699) EBF1 (ENSMMDG00005022694) il12ba (ENSMMDG00005022654) adrb2a (ENSMMDG00005022646) SH3TC2 (ENSMMDG00005022645) ablim3 (ENSMMDG00005022624) Percomorphaceae ANCESTRAL SPECIES 11 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Percomorphaceae_B ANCESTRAL SPECIES 14 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Percomorphaceae_C ANCESTRAL SPECIES 16 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Eupercaria ANCESTRAL SPECIES 12 ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Eupecaria_A ANCESTRAL SPECIES 13 ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 14 ANTXR1 (ENSLBEG00000004448) ENSLBEG00000004517 kansl3 (ENSLBEG00000004541) bmp1a (ENSLBEG00000004615) DISP3 (ENSLBEG00000004745) ENSLBEG00000004848 zgc:56596 (ENSLBEG00000004933) ENSLBEG00000004944 ENSLBEG00000004978 BIN3 (ENSLBEG00000005031) egr3 (ENSLBEG00000005053) PEBP4 (ENSLBEG00000005070) RHOBTB2 (ENSLBEG00000005097) ido1 (ENSLBEG00000005150) stc1 (ENSLBEG00000005168) nkx2.7 (ENSLBEG00000005175) #22 nkx3-1 (ENSLBEG00000005197) slc25a37 (ENSLBEG00000005208) entpd4 (ENSLBEG00000005224) si:ch211-214j8.12 (ENSLBEG00000005281) gda (ENSLBEG00000005302) zgc:101016 (ENSLBEG00000005383) abhd17b (ENSLBEG00000005400) cemip2 (ENSLBEG00000005424) ENSLBEG00000005499 TRPM3 (ENSLBEG00000005550) klf9 (ENSLBEG00000005736) fam219ab (ENSLBEG00000005756) ENSLBEG00000005801 ENSLBEG00000005858 ENSLBEG00000005953 Ballan wrasse MODERN SPECIES 289 ENSLBEG00000023350 ENSLBEG00000023306 ENSLBEG00000023270 ENSLBEG00000023237 ENSLBEG00000023146 rnf44 (ENSLBEG00000023079) faf2 (ENSLBEG00000023032) pin4 (ENSLBEG00000023007) nek12 (ENSLBEG00000022975) ENSLBEG00000022942 ENSLBEG00000022922 DRD1 (ENSLBEG00000022904) msx2a (ENSLBEG00000022889) ENSLBEG00000022823 STC2 (ENSLBEG00000022787) nkx2.5 (ENSLBEG00000022772) #22 BNIP1 (ENSLBEG00000022716) #23 atp6v0e1 (ENSLBEG00000022577) #25 rpl26 (ENSLBEG00000022531) ENSLBEG00000022450 GPR151 (ENSLBEG00000022408) ADAM19 (ENSLBEG00000022368) thg1l (ENSLBEG00000022336) LSM11 (ENSLBEG00000022318) clint1a (ENSLBEG00000022284) EBF1 (ENSLBEG00000022239) Eupecaria_B ANCESTRAL SPECIES 13 ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Perciformes ANCESTRAL SPECIES 13 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00970000195294 ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Cottioidei ANCESTRAL SPECIES 9 ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Stickleback MODERN SPECIES 3 ENSGACG00000018386 tspan17 (ENSGACG00000018387) ENSGACG00000018390 ctnna1 (ENSGACG00000018391) LRRTM2 (ENSGACG00000018406) sncb (ENSGACG00000018407) ENSGACG00000018408 rnf44 (ENSGACG00000018413) faf2 (ENSGACG00000018417) pin4 (ENSGACG00000018418) nek12 (ENSGACG00000018419) DRD1 (ENSGACG00000018420) msx2a (ENSGACG00000018421) cpeb4a (ENSGACG00000018422) STC2 (ENSGACG00000018432) nkx2.5 (ENSGACG00000018433) #22 BNIP1 (ENSGACG00000018435) #23 atp6v0e1 (ENSGACG00000018438) #25 rpl26 (ENSGACG00000018439) ENSGACG00000018440 GPR151 (ENSGACG00000018442) ENSGACG00000018443 ADAM19 (ENSGACG00000018444) thg1l (ENSGACG00000018445) LSM11 (ENSGACG00000018447) clint1a (ENSGACG00000018449) EBF1 (ENSGACG00000018450) il12ba (ENSGACG00000018453) adrb2a (ENSGACG00000018455) ENSGACG00000018456 SH3TC2 (ENSGACG00000018457) Lumpfish DUPLICATION Lumpfish MODERN SPECIES 24 ENSCLMG00005012390 ENSCLMG00005012392 ENSCLMG00005012393 bmp1a (ENSCLMG00005012454) DISP3 (ENSCLMG00005018129) ENSCLMG00005018130 zgc:56596 (ENSCLMG00005018150) ENSCLMG00005018151 ENSCLMG00005018152 ENSCLMG00005018154 BIN3 (ENSCLMG00005018157) egr3 (ENSCLMG00005018161) RHOBTB2 (ENSCLMG00005018163) ido1 (ENSCLMG00005018164) stc1 (ENSCLMG00005018172) nkx2.7 (ENSCLMG00005018175) #22 ENSCLMG00005018182 slc25a37 (ENSCLMG00005018184) entpd4 (ENSCLMG00005018186) si:ch211-214j8.12 (ENSCLMG00005004247) gda (ENSCLMG00005004261) zgc:101016 (ENSCLMG00005004415) pip5k1bb (ENSCLMG00005004499) cert1a (ENSCLMG00005004870) POLK (ENSCLMG00005004946) ANKDD1B (ENSCLMG00005004948) ENSCLMG00005004952 sv2ca (ENSCLMG00005004960) iqgap2 (ENSCLMG00005005209) F2RL2 (ENSCLMG00005019278) f2r (ENSCLMG00005019280) Lumpfish MODERN SPECIES 6 cutc (ENSCLMG00005005944) ENSCLMG00005005991 ENSCLMG00005011087 ARHGAP19 (ENSCLMG00005011089) slit1a (ENSCLMG00005011125) ENSCLMG00005013363 ENSCLMG00005013364 ENSCLMG00005013366 ENSCLMG00005013368 ENSCLMG00005013370 st3gal7 (ENSCLMG00005013372) hps1 (ENSCLMG00005013374) HPSE2 (ENSCLMG00005013376) CNNM1 (ENSCLMG00005013377) got1 (ENSCLMG00005013379) ENSCLMG00005013381 #22 nkx3.3 (ENSCLMG00005013382) slc25a28 (ENSCLMG00005013383) pyroxd2 (ENSCLMG00005013386) zgc:123010 (ENSCLMG00005013407) LOXL4 (ENSCLMG00005013408) CRTAC1 (ENSCLMG00005013409) GOLGA7B (ENSCLMG00005013410) sfrp5 (ENSCLMG00005013426) zgc:171482 (ENSCLMG00005013427) ENSCLMG00005013428 marveld1 (ENSCLMG00005013429) ENSCLMG00005013430 ENSCLMG00005013431 ENSCLMG00005013432 zfand4 (ENSCLMG00005013434) Lumpfish MODERN SPECIES 1 ENSCLMG00005006473 tspan17 (ENSCLMG00005006461) ENSCLMG00005006459 LRRTM2 (ENSCLMG00005006458) ctnna1 (ENSCLMG00005004810) sncb (ENSCLMG00005004762) ENSCLMG00005004754 rnf44 (ENSCLMG00005004702) faf2 (ENSCLMG00005004329) pin4 (ENSCLMG00005004266) nek12 (ENSCLMG00005021755) DRD1 (ENSCLMG00005021754) MSX2 (ENSCLMG00005021753) cpeb4a (ENSCLMG00005021721) STC2 (ENSCLMG00005021717) nkx2.5 (ENSCLMG00005021716) #22 BNIP1 (ENSCLMG00005021715) #23 atp6v0e1 (ENSCLMG00005021713) #25 rpl26 (ENSCLMG00005021712) ENSCLMG00005021711 GPR151 (ENSCLMG00005021710) ENSCLMG00005021709 thg1l (ENSCLMG00005021707) LSM11 (ENSCLMG00005021706) clint1a (ENSCLMG00005021705) EBF1 (ENSCLMG00005021682) il12ba (ENSCLMG00005021650) adrb2a (ENSCLMG00005021649) SH3TC2 (ENSCLMG00005021648) ablim3 (ENSCLMG00005021641) afap1l1a (ENSCLMG00005021637) Perciformes_a ANCESTRAL SPECIES 11 ENSGT00940000155429.b ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00970000195294 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Pike perch MODERN SPECIES 36 ENSSLUG00000003064 tspan17 (ENSSLUG00000003025) ENSSLUG00000003004 LRRTM2 (ENSSLUG00000002998) ctnna1 (ENSSLUG00000002150) sncb (ENSSLUG00000002043) ENSSLUG00000002036 ENSSLUG00000002033 rnf44 (ENSSLUG00000002022) faf2 (ENSSLUG00000001863) pin4 (ENSSLUG00000001787) nek12 (ENSSLUG00000001756) msx2a (ENSSLUG00000001737) cpeb4a (ENSSLUG00000001574) STC2 (ENSSLUG00000022968) nkx2.5 (ENSSLUG00000022965) #22 BNIP1 (ENSSLUG00000022961) #23 atp6v0e1 (ENSSLUG00000022957) #25 rpl26 (ENSSLUG00000022950) ENSSLUG00000022913 ADAM19 (ENSSLUG00000022804) hspa9 (ENSSLUG00000021993) rab33ba (ENSSLUG00000021952) zgc:113425 (ENSSLUG00000021951) setd7 (ENSSLUG00000021946) SCOC (ENSSLUG00000021941) zgc:154054 (ENSSLUG00000021867) ENSSLUG00000021859 ENSSLUG00000021843 ENSSLUG00000021832 ENSSLUG00000021829 Channel bull blenny DUPLICATION Channel bull blenny MODERN SPECIES 23 ENSCGOG00000000363 kansl3 (ENSCGOG00000000382) bmp1a (ENSCGOG00000000738) DISP3 (ENSCGOG00000001575) ENSCGOG00000001704 zgc:56596 (ENSCGOG00000003350) ENSCGOG00000003357 ENSCGOG00000003370 BIN3 (ENSCGOG00000003744) ENSCGOG00000003752 egr3 (ENSCGOG00000003754) PEBP4 (ENSCGOG00000003756) RHOBTB2 (ENSCGOG00000003768) ido1 (ENSCGOG00000004183) stc1 (ENSCGOG00000004216) nkx2.7 (ENSCGOG00000004224) #22 nkx3-1 (ENSCGOG00000004229) slc25a37 (ENSCGOG00000004235) entpd4 (ENSCGOG00000004248) si:ch211-214j8.12 (ENSCGOG00000004645) gda (ENSCGOG00000004648) zgc:101016 (ENSCGOG00000004816) abhd17b (ENSCGOG00000004819) cemip2 (ENSCGOG00000004855) TRPM3 (ENSCGOG00000005145) klf9 (ENSCGOG00000005651) fam219ab (ENSCGOG00000005654) ENSCGOG00000005674 ela3l (ENSCGOG00000005678) bco2l (ENSCGOG00000005696) ENSCGOG00000005704 Channel bull blenny MODERN SPECIES 1 ENSCGOG00000010350 ctnna1 (ENSCGOG00000010415) LRRTM2 (ENSCGOG00000013295) sncb (ENSCGOG00000013298) ENSCGOG00000013302 ENSCGOG00000013304 rnf44 (ENSCGOG00000013307) faf2 (ENSCGOG00000013313) pin4 (ENSCGOG00000013511) nek12 (ENSCGOG00000013526) DRD1 (ENSCGOG00000013708) msx2a (ENSCGOG00000013709) cpeb4a (ENSCGOG00000013719) STC2 (ENSCGOG00000014075) BNIP1 (ENSCGOG00000014077) #23 nkx2.5 (ENSCGOG00000014081) #22 atp6v0e1 (ENSCGOG00000014083) #25 rpl26 (ENSCGOG00000014091) ENSCGOG00000014103 GPR151 (ENSCGOG00000014195) ADAM19 (ENSCGOG00000014207) thg1l (ENSCGOG00000014601) LSM11 (ENSCGOG00000014611) clint1a (ENSCGOG00000014613) EBF1 (ENSCGOG00000014632) il12ba (ENSCGOG00000015518) adrb2a (ENSCGOG00000015521) SH3TC2 (ENSCGOG00000015522) ablim3 (ENSCGOG00000015561) afap1l1a (ENSCGOG00000016278) ENSCGOG00000016283 Eupecaria_C ANCESTRAL SPECIES 12 ENSGT00940000166166 ENSGT01030000234543.A.b ENSGT00940000160581 ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Eupercaria_incertae_sedis ANCESTRAL SPECIES 14 ENSGT01030000234543.A.b ENSGT00940000160581 ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00970000195294 ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d European seabass MODERN SPECIES 12 ENSDLAG00005020391 ENSDLAG00005020410 ENSDLAG00005028229 sncb (ENSDLAG00005020711) ENSDLAG00005020732 ENSDLAG00005031550 RNF44 (ENSDLAG00005020746) faf2 (ENSDLAG00005020783) ENSDLAG00005020799 ENSDLAG00005020802 ENSDLAG00005028564 ENSDLAG00005030567 msx2a (ENSDLAG00005001228) cpeb4a (ENSDLAG00005001293) ENSDLAG00005001491 nkx2.5 (ENSDLAG00005031252) #22 ENSDLAG00005033905 #23 ENSDLAG00005001619 ENSDLAG00005031126 ENSDLAG00005002241 ENSDLAG00005029288 LSM11 (ENSDLAG00005003399) clint1a (ENSDLAG00005003411) EBF1 (ENSDLAG00005003583) il12ba (ENSDLAG00005004098) adrb2a (ENSDLAG00005028975) SH3TC2 (ENSDLAG00005004142) ablim3 (ENSDLAG00005004497) afap1l1a (ENSDLAG00005006940) ENSDLAG00005006968 foxi3b (ENSDLAG00005006986) Large yellow croaker MODERN SPECIES ctnna1 (ENSLCRG00005021043) LRRTM2 (ENSLCRG00005021398) sncb (ENSLCRG00005021399) ENSLCRG00005021400 ENSLCRG00005021402 ENSLCRG00005021404 ENSLCRG00005021405 rnf44 (ENSLCRG00005021410) faf2 (ENSLCRG00005021421) pin4 (ENSLCRG00005021423) nek12 (ENSLCRG00005021425) DRD1 (ENSLCRG00005021427) msx2a (ENSLCRG00005021428) cpeb4a (ENSLCRG00005021432) STC2 (ENSLCRG00005021436) nkx2.5 (ENSLCRG00005021437) #22 BNIP1 (ENSLCRG00005000061) #23 atp6v0e1 (ENSLCRG00005000057) #25 rpl26 (ENSLCRG00005000065) ENSLCRG00005000089 GPR151 (ENSLCRG00005000120) ADAM19 (ENSLCRG00005000157) thg1l (ENSLCRG00005000206) LSM11 (ENSLCRG00005000218) clint1a (ENSLCRG00005000238) EBF1 (ENSLCRG00005000365) il12ba (ENSLCRG00005001169) adrb2a (ENSLCRG00005001170) SH3TC2 (ENSLCRG00005001178) ablim3 (ENSLCRG00005001204) afap1l1a (ENSLCRG00005001224) Gilthead seabream DUPLICATION Gilthead seabream MODERN SPECIES 19 ENSSAUG00010006588 kansl3 (ENSSAUG00010006617) bmp1a (ENSSAUG00010007433) DISP3 (ENSSAUG00010009898) ENSSAUG00010009914 zgc:56596 (ENSSAUG00010009964) ENSSAUG00010009979 ENSSAUG00010009980 ENSSAUG00010010005 BIN3 (ENSSAUG00010011226) egr3 (ENSSAUG00010011240) PEBP4 (ENSSAUG00010011242) RHOBTB2 (ENSSAUG00010011249) ido1 (ENSSAUG00010011523) stc1 (ENSSAUG00010011529) ENSSAUG00010011532 #22 ENSSAUG00010011534 slc25a37 (ENSSAUG00010011536) entpd4 (ENSSAUG00010011542) si:ch211-214j8.12 (ENSSAUG00010011552) gda (ENSSAUG00010011557) zgc:101016 (ENSSAUG00010011649) abhd17b (ENSSAUG00010011652) ENSSAUG00010011656 cemip2 (ENSSAUG00010011675) TRPM3 (ENSSAUG00010012904) klf9 (ENSSAUG00010022871) fam219ab (ENSSAUG00010022873) ENSSAUG00010022875 ela3l (ENSSAUG00010022877) bco2l (ENSSAUG00010022883) Gilthead seabream MODERN SPECIES 9 ENSSAUG00010002690 ENSSAUG00010002687 sncb (ENSSAUG00010002680) ENSSAUG00010002672 ENSSAUG00010002669 ENSSAUG00010002638 rnf44 (ENSSAUG00010002575) ENSSAUG00010027509 faf2 (ENSSAUG00010027508) pin4 (ENSSAUG00010027507) nek12 (ENSSAUG00010027504) DRD1 (ENSSAUG00010027503) msx2a (ENSSAUG00010027502) cpeb4a (ENSSAUG00010027501) STC2 (ENSSAUG00010027500) nkx2.5 (ENSSAUG00010027499) #22 BNIP1 (ENSSAUG00010027497) #23 atp6v0e1 (ENSSAUG00010027496) #25 rpl26 (ENSSAUG00010027493) ENSSAUG00010027485 GPR151 (ENSSAUG00010027479) ENSSAUG00010027476 thg1l (ENSSAUG00010027475) LSM11 (ENSSAUG00010027474) clint1a (ENSSAUG00010027473) EBF1 (ENSSAUG00010027457) il12ba (ENSSAUG00010027455) ENSSAUG00010027454 adrb2a (ENSSAUG00010027453) SH3TC2 (ENSSAUG00010027450) ablim3 (ENSSAUG00010027425) Tetraodontidae ANCESTRAL SPECIES 9 ENSGT00950000183054.a.a.b ENSGT00940000155429.b ENSGT00940000166166 ENSGT01030000234543.A.b ENSGT00940000160581 ENSGT00950000183175.B.a ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Fugu MODERN SPECIES 5 tspan17 (ENSTRUG00000012091) ENSTRUG00000011989 ctnna1 (ENSTRUG00000011631) LRRTM2 (ENSTRUG00000011932) sncb (ENSTRUG00000011552) ENSTRUG00000025604 ENSTRUG00000023277 ENSTRUG00000028882 rnf44 (ENSTRUG00000011344) faf2 (ENSTRUG00000011219) pin4 (ENSTRUG00000011179) nek12 (ENSTRUG00000011168) DRD1 (ENSTRUG00000021188) cpeb4a (ENSTRUG00000010947) stc2 (ENSTRUG00000032377) nkx2.5 (ENSTRUG00000010802) #22 BNIP1 (ENSTRUG00000020057) #23 atp6v0e1 (ENSTRUG00000010738) #25 rpl26l1 (ENSTRUG00000032099) PPP2R2B (ENSTRUG00000010364) GPR151 (ENSTRUG00000010343) ADAM19 (ENSTRUG00000009860) thg1l (ENSTRUG00000009758) LSM11 (ENSTRUG00000009729) clint1a (ENSTRUG00000009500) EBF1 (ENSTRUG00000009320) IL-12 p40 (ENSTRUG00000009097) adrb2a (ENSTRUG00000009069) SH3TC2 (ENSTRUG00000008708) ablim3 (ENSTRUG00000008090) afap1l1a (ENSTRUG00000007424) Tetraodon DUPLICATION Tetraodon MODERN SPECIES 3 med22 (ENSTNIG00000003000) zgc:103692 (ENSTNIG00000002999) nfu1 (ENSTNIG00000002998) gfpt1 (ENSTNIG00000002997) ENSTNIG00000002996 ENSTNIG00000003330 ppm1f (ENSTNIG00000004173) ENSTNIG00000005486 kansl3 (ENSTNIG00000010820) bmp1a (ENSTNIG00000010819) ENSTNIG00000010818 ENSTNIG00000010817 egr3 (ENSTNIG00000010816) RHOBTB2 (ENSTNIG00000010815) ENSTNIG00000010814 nkx2.7 (ENSTNIG00000017074) #22 slc25a37 (ENSTNIG00000010812) entpd4 (ENSTNIG00000010811) gda (ENSTNIG00000010810) zgc:101016 (ENSTNIG00000010809) abhd17b (ENSTNIG00000010808) cemip2 (ENSTNIG00000010807) TRPM3 (ENSTNIG00000003890) fam219ab (ENSTNIG00000004677) ENSTNIG00000001732 bco2l (ENSTNIG00000003989) ENSTNIG00000003988 LZTS1 (ENSTNIG00000009890) hspb11 (ENSTNIG00000009891) smn1 (ENSTNIG00000009892) rtkna (ENSTNIG00000009893) Tetraodon MODERN SPECIES anxa6 (ENSTNIG00000009003) tnip1 (ENSTNIG00000009004) gpx3 (ENSTNIG00000000753) dctn4 (ENSTNIG00000009005) ENSTNIG00000000876 tspan17 (ENSTNIG00000009006) ENSTNIG00000009007 ctnna1 (ENSTNIG00000009008) sncb (ENSTNIG00000005611) ENSTNIG00000005612 rnf44 (ENSTNIG00000005613) faf2 (ENSTNIG00000005614) pin4 (ENSTNIG00000005615) ENSTNIG00000017077 STC2 (ENSTNIG00000017076) nkx2.5 (ENSTNIG00000017075) #22 BNIP1 (ENSTNIG00000017073) #23 atp6v0e1 (ENSTNIG00000017072) #25 rpl26 (ENSTNIG00000017071) PPP2R2B (ENSTNIG00000017070) GPR151 (ENSTNIG00000017069) ADAM19 (ENSTNIG00000017068) thg1l (ENSTNIG00000017067) LSM11 (ENSTNIG00000017066) clint1a (ENSTNIG00000017065) EBF1 (ENSTNIG00000017063) il12ba (ENSTNIG00000001796) adrb2a (ENSTNIG00000017062) SH3TC2 (ENSTNIG00000017061) ablim3 (ENSTNIG00000017060) afap1l1a (ENSTNIG00000017059) Percomorphaceae_D ANCESTRAL SPECIES 17 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Carangaria ANCESTRAL SPECIES 15 ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Carangaria_A ANCESTRAL SPECIES 22 ENSGT00940000166166 ENSGT01030000234543.A.b ENSGT00940000160581 ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Seriola ANCESTRAL SPECIES 22 ENSGT00940000166166 ENSGT01030000234543.A.b ENSGT00940000160581 ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Greater amberjack MODERN SPECIES 67 ENSSDUG00000009275 ctnna1 (ENSSDUG00000009312) LRRTM2 (ENSSDUG00000009406) sncb (ENSSDUG00000009418) ENSSDUG00000009431 ENSSDUG00000009436 ENSSDUG00000009443 rnf44 (ENSSDUG00000009472) faf2 (ENSSDUG00000009501) nek12 (ENSSDUG00000009544) pin4 (ENSSDUG00000009558) DRD1 (ENSSDUG00000009570) msx2a (ENSSDUG00000009581) cpeb4a (ENSSDUG00000009599) STC2 (ENSSDUG00000009667) nkx2.5 (ENSSDUG00000009686) #22 BNIP1 (ENSSDUG00000009715) #23 atp6v0e1 (ENSSDUG00000009742) #25 rpl26 (ENSSDUG00000009759) ENSSDUG00000009786 GPR151 (ENSSDUG00000009811) ADAM19 (ENSSDUG00000009819) thg1l (ENSSDUG00000009841) LSM11 (ENSSDUG00000009878) clint1a (ENSSDUG00000009895) EBF1 (ENSSDUG00000009954) il12ba (ENSSDUG00000010051) adrb2a (ENSSDUG00000010174) SH3TC2 (ENSSDUG00000010200) ablim3 (ENSSDUG00000010236) afap1l1a (ENSSDUG00000010313) Yellowtail amberjack MODERN SPECIES 2988 sncb (ENSSLDG00000003968) ENSSLDG00000003943 ENSSLDG00000003928 ENSSLDG00000003883 rnf44 (ENSSLDG00000003862) faf2 (ENSSLDG00000003793) pin4 (ENSSLDG00000003765) nek12 (ENSSLDG00000003738) DRD1 (ENSSLDG00000003712) msx2a (ENSSLDG00000003697) cpeb4a (ENSSLDG00000003652) STC2 (ENSSLDG00000003626) nkx2.5 (ENSSLDG00000003605) #22 BNIP1 (ENSSLDG00000003548) #23 atp6v0e1 (ENSSLDG00000003531) #25 rpl26 (ENSSLDG00000003512) ENSSLDG00000003475 GPR151 (ENSSLDG00000003464) ENSSLDG00000003450 thg1l (ENSSLDG00000003416) LSM11 (ENSSLDG00000003399) clint1a (ENSSLDG00000003286) EBF1 (ENSSLDG00000003179) il12ba (ENSSLDG00000003125) adrb2a (ENSSLDG00000003082) SH3TC2 (ENSSLDG00000002927) ablim3 (ENSSLDG00000002750) afap1l1a (ENSSLDG00000002678) Barramundi perch MODERN SPECIES 63 ENSLCAG00010007779 LRRTM2 (ENSLCAG00010007769) ctnna1 (ENSLCAG00010007683) sncb (ENSLCAG00010007635) ENSLCAG00010007631 ENSLCAG00010007629 ENSLCAG00010007622 rnf44 (ENSLCAG00010007613) faf2 (ENSLCAG00010007545) pin4 (ENSLCAG00010007520) nek12 (ENSLCAG00010007515) DRD1 (ENSLCAG00010007511) msx2a (ENSLCAG00010007508) cpeb4a (ENSLCAG00010007459) STC2 (ENSLCAG00010007434) nkx2.5 (ENSLCAG00010007425) #22 BNIP1 (ENSLCAG00010007416) #23 atp6v0e1 (ENSLCAG00010007410) #25 rpl26 (ENSLCAG00010007402) ENSLCAG00010007273 GPR151 (ENSLCAG00010007185) ADAM19 (ENSLCAG00010007141) thg1l (ENSLCAG00010007125) LSM11 (ENSLCAG00010007119) clint1a (ENSLCAG00010007115) il12ba (ENSLCAG00010007108) EBF1 (ENSLCAG00010006361) adrb2a (ENSLCAG00010006103) SH3TC2 (ENSLCAG00010006084) ablim3 (ENSLCAG00010006048) afap1l1a (ENSLCAG00010006031) Pleuronectoidei ANCESTRAL SPECIES 18 ENSGT00940000155429.b ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Tongue sole DUPLICATION Tongue sole MODERN SPECIES 398 ANTXR1 (ENSCSEG00000014969) ENSCSEG00000014947 kansl3 (ENSCSEG00000014877) bmp1a (ENSCSEG00000014825) DISP3 (ENSCSEG00000014759) ENSCSEG00000014690 zgc:56596 (ENSCSEG00000014676) ENSCSEG00000014642 ENSCSEG00000014623 BIN3 (ENSCSEG00000014612) egr3 (ENSCSEG00000014609) PEBP4 (ENSCSEG00000014600) RHOBTB2 (ENSCSEG00000014564) ido1 (ENSCSEG00000014554) stc1 (ENSCSEG00000014547) nkx2.7 (ENSCSEG00000014539) #22 nkx3-1 (ENSCSEG00000014532) slc25a37 (ENSCSEG00000014521) entpd4 (ENSCSEG00000014495) si:ch211-214j8.12 (ENSCSEG00000014486) gda (ENSCSEG00000014463) zgc:101016 (ENSCSEG00000014455) abhd17b (ENSCSEG00000014441) cemip2 (ENSCSEG00000014420) TRPM3 (ENSCSEG00000014402) ENSCSEG00000014394 KIAA0825 (ENSCSEG00000014300) fam172a (ENSCSEG00000014233) nr2f1a (ENSCSEG00000014227) ENSCSEG00000014222 riok2 (ENSCSEG00000014204) Tongue sole MODERN SPECIES 6 snx25 (ENSCSEG00000020291) ENSCSEG00000020288 CNGA2 (ENSCSEG00000020272) ENSCSEG00000020233 ptcd3 (ENSCSEG00000020225) POLR1A (ENSCSEG00000020190) irf2 (ENSCSEG00000020185) ENSCSEG00000020183 CASP3 (ENSCSEG00000020179) ENSCSEG00000020176 st3gal5 (ENSCSEG00000020172) faf2 (ENSCSEG00000020164) DRD1 (ENSCSEG00000020160) cpeb4a (ENSCSEG00000020154) STC2 (ENSCSEG00000020153) nkx2.5 (ENSCSEG00000020152) #22 hmmr (ENSCSEG00000020147) cyfip2 (ENSCSEG00000020134) itk (ENSCSEG00000020127) ENSCSEG00000020111 gria1a (ENSCSEG00000020093) ENSCSEG00000020084 WNT8A (ENSCSEG00000020067) ENSCSEG00000020054 ENSCSEG00000020052 foxi3b (ENSCSEG00000020048) ENSCSEG00000020044 afap1l1a (ENSCSEG00000020028) ablim3 (ENSCSEG00000020013) SH3TC2 (ENSCSEG00000020000) adrb2a (ENSCSEG00000019998) Turbot DUPLICATION Turbot MODERN SPECIES 21 ENSSMAG00000006808 kansl3 (ENSSMAG00000006885) ENSSMAG00000026867 bmp1a (ENSSMAG00000007022) ENSSMAG00000007089 ENSSMAG00000007121 zgc:56596 (ENSSMAG00000038055) ENSSMAG00000007205 ENSSMAG00000029066 ENSSMAG00000007228 ENSSMAG00000007276 egr3 (ENSSMAG00000007298) ENSSMAG00000007318 ido1 (ENSSMAG00000007337) stc1 (ENSSMAG00000031987) nkx2.7 (ENSSMAG00000007371) #22 nkx3-1 (ENSSMAG00000007372) slc25a37 (ENSSMAG00000026420) entpd4 (ENSSMAG00000007397) ENSSMAG00000007432 gda (ENSSMAG00000007442) zgc:101016 (ENSSMAG00000027085) abhd17b (ENSSMAG00000028606) cemip2 (ENSSMAG00000007483) TRPM3 (ENSSMAG00000007546) ENSSMAG00000026670 klf9 (ENSSMAG00000007714) fam219ab (ENSSMAG00000007738) ela3l (ENSSMAG00000007773) bco2l (ENSSMAG00000007812) ENSSMAG00000007863 Turbot MODERN SPECIES 4 tspan17 (ENSSMAG00000008516) ENSSMAG00000026477 ENSSMAG00000008568 ENSSMAG00000008624 sncb (ENSSMAG00000035291) ENSSMAG00000008660 ENSSMAG00000008672 ENSSMAG00000008683 rnf44 (ENSSMAG00000008740) faf2 (ENSSMAG00000008747) ENSSMAG00000008767 ENSSMAG00000008788 msx2a (ENSSMAG00000008799) cpeb4a (ENSSMAG00000008812) ENSSMAG00000008853 nkx2.5 (ENSSMAG00000034948) #22 BNIP1 (ENSSMAG00000008871) #23 atp6v0e1 (ENSSMAG00000023882) #25 rpl26 (ENSSMAG00000008898) ENSSMAG00000008920 ENSSMAG00000008960 ENSSMAG00000008967 ENSSMAG00000008988 LSM11 (ENSSMAG00000008998) clint1a (ENSSMAG00000009019) EBF1 (ENSSMAG00000009083) il12ba (ENSSMAG00000009129) adrb2a (ENSSMAG00000009143) SH3TC2 (ENSSMAG00000009150) ablim3 (ENSSMAG00000009267) afap1l1a (ENSSMAG00000009343) Anabantaria ANCESTRAL SPECIES 15 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Zig-zag eel MODERN SPECIES 1 tspan17 (ENSMAMG00000024855) ENSMAMG00000011896 ENSMAMG00000011913 ENSMAMG00000011986 sncb (ENSMAMG00000011993) ENSMAMG00000012017 ENSMAMG00000012029 rnf44 (ENSMAMG00000012061) faf2 (ENSMAMG00000012092) ENSMAMG00000012108 ENSMAMG00000026007 ENSMAMG00000012136 ENSMAMG00000012142 cpeb4a (ENSMAMG00000012163) ENSMAMG00000012202 NKX2-5 (ENSMAMG00000012211) #22 BNIP1 (ENSMAMG00000012221) #23 atp6v0e1 (ENSMAMG00000012234) #25 rpl26 (ENSMAMG00000012244) ENSMAMG00000012253 ENSMAMG00000012275 ENSMAMG00000012283 ENSMAMG00000012302 LSM11 (ENSMAMG00000012318) clint1a (ENSMAMG00000012330) EBF1 (ENSMAMG00000012394) il12ba (ENSMAMG00000012459) adrb2a (ENSMAMG00000012468) SH3TC2 (ENSMAMG00000012479) ablim3 (ENSMAMG00000012572) afap1l1a (ENSMAMG00000012645) Anabantoidei ANCESTRAL SPECIES 11 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Siamese fighting fish DUPLICATION Siamese fighting fish MODERN SPECIES 20 ANTXR1 (ENSBSLG00000005187) kansl3 (ENSBSLG00000006146) bmp1a (ENSBSLG00000006272) DISP3 (ENSBSLG00000010305) ENSBSLG00000010719 zgc:56596 (ENSBSLG00000011058) ENSBSLG00000011072 ENSBSLG00000011082 ENSBSLG00000011089 BIN3 (ENSBSLG00000011188) egr3 (ENSBSLG00000011203) PEBP4 (ENSBSLG00000011597) RHOBTB2 (ENSBSLG00000011736) ido1 (ENSBSLG00000011970) stc1 (ENSBSLG00000012046) nkx2.7 (ENSBSLG00000012072) #22 ENSBSLG00000012091 slc25a37 (ENSBSLG00000012098) entpd4 (ENSBSLG00000012121) si:ch211-214j8.12 (ENSBSLG00000012330) gda (ENSBSLG00000012339) zgc:101016 (ENSBSLG00000012356) abhd17b (ENSBSLG00000012372) cemip2 (ENSBSLG00000012408) TRPM3 (ENSBSLG00000012943) klf9 (ENSBSLG00000013478) fam219ab (ENSBSLG00000013497) ENSBSLG00000013594 ela3l (ENSBSLG00000013603) bco2l (ENSBSLG00000013646) ENSBSLG00000013728 Siamese fighting fish MODERN SPECIES 1 ENSBSLG00000005995 LRRTM2 (ENSBSLG00000005990) ctnna1 (ENSBSLG00000005619) sncb (ENSBSLG00000005521) ENSBSLG00000005511 ENSBSLG00000005500 ENSBSLG00000024628 rnf44 (ENSBSLG00000024611) faf2 (ENSBSLG00000024602) pin4 (ENSBSLG00000024596) nek12 (ENSBSLG00000024521) ENSBSLG00000024507 msx2a (ENSBSLG00000024502) cpeb4a (ENSBSLG00000024396) STC2 (ENSBSLG00000024394) nkx2.5 (ENSBSLG00000024391) #22 BNIP1 (ENSBSLG00000024390) #23 atp6v0e1 (ENSBSLG00000024387) #25 rpl26 (ENSBSLG00000024385) PPP2R2B (ENSBSLG00000024353) GPR151 (ENSBSLG00000024352) ENSBSLG00000024320 thg1l (ENSBSLG00000024304) LSM11 (ENSBSLG00000024301) clint1a (ENSBSLG00000024298) EBF1 (ENSBSLG00000024182) il12ba (ENSBSLG00000024142) adrb2a (ENSBSLG00000024137) SH3TC2 (ENSBSLG00000024125) ablim3 (ENSBSLG00000023320) afap1l1a (ENSBSLG00000023244) Climbing perch DUPLICATION Climbing perch MODERN SPECIES 22 ENSATEG00000000258 kansl3 (ENSATEG00000000386) bmp1a (ENSATEG00000000432) ENSATEG00000000522 ENSATEG00000000721 zgc:56596 (ENSATEG00000026546) ENSATEG00000026852 ENSATEG00000000819 ENSATEG00000001058 BIN3 (ENSATEG00000001065) egr3 (ENSATEG00000029167) PEBP4 (ENSATEG00000025577) ENSATEG00000001105 ido1 (ENSATEG00000001161) stc1 (ENSATEG00000001228) nkx2.7 (ENSATEG00000001255) #22 nkx3-1 (ENSATEG00000001262) slc25a37 (ENSATEG00000027544) entpd4 (ENSATEG00000001288) ENSATEG00000001320 gda (ENSATEG00000001328) C9orf85 (ENSATEG00000027170) abhd17b (ENSATEG00000001345) cemip2 (ENSATEG00000001355) TRPM3 (ENSATEG00000001400) klf9 (ENSATEG00000027040) fam219ab (ENSATEG00000001558) ENSATEG00000001590 ela3l (ENSATEG00000001667) bco2l (ENSATEG00000001720) ENSATEG00000002118 Climbing perch MODERN SPECIES 1 ENSATEG00000002252 ENSATEG00000002243 ctnna1 (ENSATEG00000002185) sncb (ENSATEG00000002106) ENSATEG00000002088 ENSATEG00000002075 RNF44 (ENSATEG00000001967) faf2 (ENSATEG00000001915) ENSATEG00000029158 ENSATEG00000001902 ENSATEG00000001882 ENSATEG00000001870 ENSATEG00000026251 cpeb4a (ENSATEG00000001785) ENSATEG00000001757 NKX2-5 (ENSATEG00000001752) #22 BNIP1 (ENSATEG00000001656) #23 atp6v0e1 (ENSATEG00000026190) #25 rpl26 (ENSATEG00000001516) ENSATEG00000001492 ENSATEG00000001487 ENSATEG00000001474 ENSATEG00000001426 LSM11 (ENSATEG00000001413) clint1a (ENSATEG00000001365) EBF1 (ENSATEG00000001287) il12ba (ENSATEG00000001253) adrb2a (ENSATEG00000001246) SH3TC2 (ENSATEG00000001211) ablim3 (ENSATEG00000001150) afap1l1a (ENSATEG00000001108) Ovalentaria ANCESTRAL SPECIES 15 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00970000195294 ENSGT00940000165849 ENSGT01090000260639 ENSGT00940000162796.b ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Atherinomorphae ANCESTRAL SPECIES 9 ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00970000195294 ENSGT00940000165849 ENSGT00940000162796.b ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Cyprinodontiformes ANCESTRAL SPECIES 8 ENSGT00940000166166 ENSGT01030000234543.A.b ENSGT00940000160581 ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00970000195294 ENSGT00940000165849 ENSGT00940000162796.b ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Cyprinodontoidei ANCESTRAL SPECIES 19 ENSGT00940000155429.b ENSGT00940000166166 ENSGT01030000234543.A.b ENSGT00940000160581 ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00970000195294 ENSGT00940000165849 ENSGT00940000162796.b ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000155857.f.a ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Poeciliinae ANCESTRAL SPECIES 11 ENSGT00950000183054.a.a.b ENSGT00940000155429.b ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000155857.f.a ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Poecilia ANCESTRAL SPECIES 21 ENSGT00950000183054.a.a.b ENSGT00940000155429.b ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000155857.f.a ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d NAME_6 ANCESTRAL SPECIES 17 ENSGT00950000183054.a.a.b ENSGT00940000155429.b ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000155857.f.a ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b.f ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b.f Amazon molly MODERN SPECIES 378 dctn4 (ENSPFOG00000002407) ENSPFOG00000002395 tspan17 (ENSPFOG00000002286) ENSPFOG00000002270 LRRTM2 (ENSPFOG00000002263) ctnna1 (ENSPFOG00000001908) sncb (ENSPFOG00000001734) ENSPFOG00000024419 ENSPFOG00000001357 rnf44 (ENSPFOG00000001037) faf2 (ENSPFOG00000000899) pin4 (ENSPFOG00000000842) DRD1 (ENSPFOG00000020499) cpeb4a (ENSPFOG00000000778) STC2 (ENSPFOG00000000731) nkx2.5 (ENSPFOG00000000706) #22 BNIP1 (ENSPFOG00000000672) #23 atp6v0e1 (ENSPFOG00000000653) #25 rpl26 (ENSPFOG00000000638) ENSPFOG00000000474 GPR151 (ENSPFOG00000020498) ENSPFOG00000000301 Sailfin molly MODERN SPECIES 581 sncb (ENSPLAG00000017056) ENSPLAG00000017067 ENSPLAG00000017080 rnf44 (ENSPLAG00000017091) faf2 (ENSPLAG00000017125) pin4 (ENSPLAG00000017133) DRD1 (ENSPLAG00000017141) cpeb4a (ENSPLAG00000017182) STC2 (ENSPLAG00000017189) nkx2.5 (ENSPLAG00000017209) #22 BNIP1 (ENSPLAG00000017243) #23 atp6v0e1 (ENSPLAG00000017254) #25 rpl26 (ENSPLAG00000017267) ENSPLAG00000017295 GPR151 (ENSPLAG00000017298) ENSPLAG00000000394 Guppy MODERN SPECIES 440 ENSPREG00000019230 ENSPREG00000019239 SLITRK4 (ENSPREG00000019248) ENSPREG00000019281 sncb (ENSPREG00000019300) ENSPREG00000019314 ENSPREG00000019330 ENSPREG00000019337 rnf44 (ENSPREG00000019369) faf2 (ENSPREG00000019408) pin4 (ENSPREG00000019423) ENSPREG00000019444 cpeb4a (ENSPREG00000019466) ENSPREG00000019512 STC2 (ENSPREG00000019524) nkx2.5 (ENSPREG00000019530) #22 BNIP1 (ENSPREG00000019539) #23 atp6v0e1 (ENSPREG00000019563) #25 rpl26 (ENSPREG00000019574) ENSPREG00000019594 ENSPREG00000019638 ENSPREG00000019651 thg1l (ENSPREG00000019678) LSM11 (ENSPREG00000019696) clint1a (ENSPREG00000019704) EBF1 (ENSPREG00000019762) il12ba (ENSPREG00000019792) adrb2a (ENSPREG00000019818) SH3TC2 (ENSPREG00000019866) ablim3 (ENSPREG00000020058) afap1l1a (ENSPREG00000020266) Platyfish DUPLICATION Platyfish MODERN SPECIES 3 ENSXMAG00000026730 ENSXMAG00000028569 kansl3 (ENSXMAG00000001779) bmp1a (ENSXMAG00000000900) DISP3 (ENSXMAG00000000975) ENSXMAG00000000991 zgc:56596 (ENSXMAG00000001016) ENSXMAG00000001028 ENSXMAG00000001075 BIN3 (ENSXMAG00000026528) egr3 (ENSXMAG00000023900) PEBP4 (ENSXMAG00000001148) RHOBTB2 (ENSXMAG00000001153) ido1 (ENSXMAG00000001181) stc1 (ENSXMAG00000024272) nkx2.7 (ENSXMAG00000001215) #22 nkx3-1 (ENSXMAG00000020262) slc25a37 (ENSXMAG00000001218) entpd4 (ENSXMAG00000001222) si:ch211-214j8.12 (ENSXMAG00000020940) gda (ENSXMAG00000001250) zgc:101016 (ENSXMAG00000001287) abhd17b (ENSXMAG00000024855) cemip2 (ENSXMAG00000001300) TRPM3 (ENSXMAG00000001333) klf9 (ENSXMAG00000001428) fam219ab (ENSXMAG00000001430) ENSXMAG00000024860 ela3l (ENSXMAG00000001441) bco2l (ENSXMAG00000001475) ENSXMAG00000001507 Platyfish MODERN SPECIES 15 ENSXMAG00000024308 tspan17 (ENSXMAG00000010118) ENSXMAG00000029089 ctnna1 (ENSXMAG00000010139) LRRTM2 (ENSXMAG00000027634) sncb (ENSXMAG00000010166) ENSXMAG00000021731 ENSXMAG00000010173 ENSXMAG00000019505 rnf44 (ENSXMAG00000025911) faf2 (ENSXMAG00000010225) pin4 (ENSXMAG00000010241) DRD1 (ENSXMAG00000019506) cpeb4a (ENSXMAG00000010247) STC2 (ENSXMAG00000010263) nkx2.5 (ENSXMAG00000010266) #22 BNIP1 (ENSXMAG00000023412) #23 atp6v0e1 (ENSXMAG00000021044) #25 rpl26 (ENSXMAG00000010281) ENSXMAG00000029074 ENSXMAG00000010315 thg1l (ENSXMAG00000008240) LSM11 (ENSXMAG00000008238) clint1a (ENSXMAG00000008223) EBF1 (ENSXMAG00000010351) il12ba (ENSXMAG00000010355) adrb2a (ENSXMAG00000019510) SH3TC2 (ENSXMAG00000010375) ablim3 (ENSXMAG00000010396) afap1l1a (ENSXMAG00000010435) ENSXMAG00000010450 NAME_4 ANCESTRAL SPECIES 20 ENSGT00940000155429.b ENSGT00940000166166 ENSGT01030000234543.A.b ENSGT00940000160581 ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00970000195294 ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000155857.f.a ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Mummichog MODERN SPECIES 235 tspan17 (ENSFHEG00000007920) ENSFHEG00000007887 ctnna1 (ENSFHEG00000007851) LRRTM2 (ENSFHEG00000007762) sncb (ENSFHEG00000007749) ENSFHEG00000007723 ENSFHEG00000007707 ENSFHEG00000007698 rnf44 (ENSFHEG00000007679) faf2 (ENSFHEG00000007655) pin4 (ENSFHEG00000007619) ENSFHEG00000007608 DRD1 (ENSFHEG00000007554) cpeb4a (ENSFHEG00000007532) STC2 (ENSFHEG00000007460) nkx2.5 (ENSFHEG00000007444) #22 BNIP1 (ENSFHEG00000007429) #23 rpl26 (ENSFHEG00000007399) ENSFHEG00000007377 GPR151 (ENSFHEG00000007363) ENSFHEG00000007352 thg1l (ENSFHEG00000007339) ENSFHEG00000007324 clint1a (ENSFHEG00000007304) EBF1 (ENSFHEG00000007292) Sheepshead minnow MODERN SPECIES 120 dctn4 (ENSCVAG00000013605) ENSCVAG00000013574 tspan17 (ENSCVAG00000013563) ENSCVAG00000013542 ctnna1 (ENSCVAG00000013536) LRRTM2 (ENSCVAG00000013459) sncb (ENSCVAG00000013454) ENSCVAG00000013449 ENSCVAG00000013433 rnf44 (ENSCVAG00000013430) ENSCVAG00000013418 faf2 (ENSCVAG00000013408) pin4 (ENSCVAG00000013371) DRD1 (ENSCVAG00000013353) ENSCVAG00000013345 nkx2.5 (ENSCVAG00000013333) #22 BNIP1 (ENSCVAG00000013320) #23 atp6v0e1 (ENSCVAG00000013296) #25 rpl26 (ENSCVAG00000013291) ENSCVAG00000013279 GPR151 (ENSCVAG00000013260) ENSCVAG00000013235 thg1l (ENSCVAG00000011708) LSM11 (ENSCVAG00000011703) clint1a (ENSCVAG00000011682) EBF1 (ENSCVAG00000011669) Aplocheiloidei ANCESTRAL SPECIES 98 ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B.f ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Turquoise killifish MODERN SPECIES 1616 ENSNFUG00015010105 LUZP2 (ENSNFUG00015010066) ENSNFUG00015010038 LINGO1B (ENSNFUG00015010025) kcnq1.1 (ENSNFUG00015009769) ENSNFUG00015009716 apip (ENSNFUG00015009611) slc1a2a (ENSNFUG00015008803) SLC35C1 (ENSNFUG00015008744) ENSNFUG00015008742 CHST1 (ENSNFUG00015008741) ENSNFUG00015008739 ENSNFUG00015008734 ENSNFUG00015008733 Nfu_g_1_003199 (ENSNFUG00015008728) nkx2.5 (ENSNFUG00015008727) #22 BNIP1A (ENSNFUG00015008720) #23 ATPV0E1 (ENSNFUG00015008714) #25 RPL26 (ENSNFUG00015008711) MAPK8IP1 (ENSNFUG00015008703) ENSNFUG00015008697 ENSNFUG00015008695 ENSNFUG00015008690 CABZ01083440.1 (ENSNFUG00015007483) ENSNFUG00015007340 ENSNFUG00015007337 ENSNFUG00015007333 ENSNFUG00015007332 ENSNFUG00015007327 NELL1 (ENSNFUG00015006562) ENSNFUG00015006470 Mangrove rivulus DUPLICATION Mangrove rivulus MODERN SPECIES 39 ENSKMAG00000005879 kansl3 (ENSKMAG00000005909) bmp1a (ENSKMAG00000005980) DISP3 (ENSKMAG00000006054) ENSKMAG00000006134 zgc:56596 (ENSKMAG00000006224) ENSKMAG00000006243 ENSKMAG00000006253 ENSKMAG00000006297 BIN3 (ENSKMAG00000006340) egr3 (ENSKMAG00000006375) PEBP4 (ENSKMAG00000006387) RHOBTB2 (ENSKMAG00000006414) ido1 (ENSKMAG00000006470) stc1 (ENSKMAG00000006496) nkx2.7 (ENSKMAG00000006522) #22 nkx3-1 (ENSKMAG00000006536) slc25a37 (ENSKMAG00000006559) entpd4 (ENSKMAG00000006595) si:ch211-214j8.12 (ENSKMAG00000006634) gda (ENSKMAG00000006654) zgc:101016 (ENSKMAG00000006684) abhd17b (ENSKMAG00000006707) cemip2 (ENSKMAG00000006730) TRPM3 (ENSKMAG00000006806) klf9 (ENSKMAG00000006965) fam219ab (ENSKMAG00000006976) ENSKMAG00000007006 ela3l (ENSKMAG00000007027) bco2l (ENSKMAG00000007052) ENSKMAG00000007086 Mangrove rivulus MODERN SPECIES 188 sncb (ENSKMAG00000008652) ENSKMAG00000008666 ENSKMAG00000008678 ENSKMAG00000008688 rnf44 (ENSKMAG00000008744) faf2 (ENSKMAG00000008803) pin4 (ENSKMAG00000008835) nek12 (ENSKMAG00000008848) DRD1 (ENSKMAG00000008861) ENSKMAG00000008902 STC2 (ENSKMAG00000008973) nkx2.5 (ENSKMAG00000009000) #22 BNIP1 (ENSKMAG00000009017) #23 atp6v0e1 (ENSKMAG00000009053) #25 rpl26 (ENSKMAG00000009061) ENSKMAG00000009079 GPR151 (ENSKMAG00000009118) ADAM19 (ENSKMAG00000009132) thg1l (ENSKMAG00000009156) LSM11 (ENSKMAG00000009181) clint1a (ENSKMAG00000009195) EBF1 (ENSKMAG00000009270) il12ba (ENSKMAG00000009319) adrb2a (ENSKMAG00000009371) SH3TC2 (ENSKMAG00000009379) ablim3 (ENSKMAG00000009437) afap1l1a (ENSKMAG00000009542) Oryzias ANCESTRAL SPECIES 17 ENSGT00950000183054.a.a.b ENSGT00940000155429.b ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000155857.f.a ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Oryzias_b ANCESTRAL SPECIES 20 ENSGT00950000183054.a.a.b ENSGT00940000155429.b ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000155857.f.a ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00990000205642 ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b Javanese ricefish DUPLICATION Javanese ricefish MODERN SPECIES 23 ANTXR1 (ENSOJAG00000018592) ENSOJAG00000018518 kansl3 (ENSOJAG00000018289) bmp1a (ENSOJAG00000014439) DISP3 (ENSOJAG00000014083) ENSOJAG00000013885 zgc:56596 (ENSOJAG00000013861) ENSOJAG00000013857 ENSOJAG00000013275 BIN3 (ENSOJAG00000013256) egr3 (ENSOJAG00000013237) ENSOJAG00000013180 RHOBTB2 (ENSOJAG00000012899) ido1 (ENSOJAG00000012861) stc1 (ENSOJAG00000012851) nkx2.7 (ENSOJAG00000012825) #22 nkx3-1 (ENSOJAG00000012815) slc25a37 (ENSOJAG00000012798) entpd4 (ENSOJAG00000012733) si:ch211-214j8.12 (ENSOJAG00000012722) gda (ENSOJAG00000012238) zgc:101016 (ENSOJAG00000012206) abhd17b (ENSOJAG00000012179) cemip2 (ENSOJAG00000010804) TRPM3 (ENSOJAG00000003084) klf9 (ENSOJAG00000002071) fam219ab (ENSOJAG00000001965) ENSOJAG00000001944 ela3l (ENSOJAG00000001923) bco2l (ENSOJAG00000001804) ENSOJAG00000001734 Javanese ricefish MODERN SPECIES 1 ENSOJAG00000011236 tspan17 (ENSOJAG00000011117) ENSOJAG00000011079 LRRTM2 (ENSOJAG00000011070) ctnna1 (ENSOJAG00000010665) ENSOJAG00000010594 sncb (ENSOJAG00000010574) ENSOJAG00000010561 ENSOJAG00000010535 rnf44 (ENSOJAG00000010371) faf2 (ENSOJAG00000010332) pin4 (ENSOJAG00000010324) DRD1 (ENSOJAG00000010314) cpeb4a (ENSOJAG00000010241) STC2 (ENSOJAG00000010214) nkx2.5 (ENSOJAG00000010200) #22 BNIP1 (ENSOJAG00000010159) #23 atp6v0e1 (ENSOJAG00000010132) #25 rpl26 (ENSOJAG00000010114) ENSOJAG00000009776 GPR151 (ENSOJAG00000009747) ENSOJAG00000008293 thg1l (ENSOJAG00000008145) LSM11 (ENSOJAG00000008134) clint1a (ENSOJAG00000008106) ENSOJAG00000008070 EBF1 (ENSOJAG00000007315) il12ba (ENSOJAG00000007054) adrb2a (ENSOJAG00000007009) SH3TC2 (ENSOJAG00000006962) ablim3 (ENSOJAG00000006796) Indian medaka DUPLICATION Indian medaka MODERN SPECIES 11 ANTXR1 (ENSOMEG00000009479) ENSOMEG00000009401 kansl3 (ENSOMEG00000009342) bmp1a (ENSOMEG00000009251) DISP3 (ENSOMEG00000009188) ENSOMEG00000009143 zgc:56596 (ENSOMEG00000009041) ENSOMEG00000009009 ENSOMEG00000008926 BIN3 (ENSOMEG00000008891) egr3 (ENSOMEG00000008841) PEBP4 (ENSOMEG00000008814) RHOBTB2 (ENSOMEG00000008772) ido1 (ENSOMEG00000008726) stc1 (ENSOMEG00000008701) nkx2.7 (ENSOMEG00000008687) #22 nkx3-1 (ENSOMEG00000008674) slc25a37 (ENSOMEG00000008664) entpd4 (ENSOMEG00000000818) si:ch211-214j8.12 (ENSOMEG00000008606) gda (ENSOMEG00000008579) zgc:101016 (ENSOMEG00000008533) abhd17b (ENSOMEG00000008520) cemip2 (ENSOMEG00000008497) TRPM3 (ENSOMEG00000008382) klf9 (ENSOMEG00000008115) fam219ab (ENSOMEG00000008100) ENSOMEG00000008074 ela3l (ENSOMEG00000008066) bco2l (ENSOMEG00000008038) ENSOMEG00000007993 Indian medaka MODERN SPECIES 16 ENSOMEG00000010722 tspan17 (ENSOMEG00000010802) ENSOMEG00000010828 LRRTM2 (ENSOMEG00000010844) ctnna1 (ENSOMEG00000010909) sncb (ENSOMEG00000010936) ENSOMEG00000010948 ENSOMEG00000010960 ENSOMEG00000011024 rnf44 (ENSOMEG00000011064) faf2 (ENSOMEG00000011110) pin4 (ENSOMEG00000011141) DRD1 (ENSOMEG00000011170) cpeb4a (ENSOMEG00000011206) STC2 (ENSOMEG00000011223) nkx2.5 (ENSOMEG00000011234) #22 BNIP1 (ENSOMEG00000011257) #23 atp6v0e1 (ENSOMEG00000011268) #25 rpl26 (ENSOMEG00000011284) ENSOMEG00000011370 GPR151 (ENSOMEG00000011385) ENSOMEG00000011448 thg1l (ENSOMEG00000011477) LSM11 (ENSOMEG00000011492) clint1a (ENSOMEG00000011516) ENSOMEG00000011527 EBF1 (ENSOMEG00000011625) il12ba (ENSOMEG00000011666) adrb2a (ENSOMEG00000011673) SH3TC2 (ENSOMEG00000011756) ablim3 (ENSOMEG00000011979) Oryzias_a ANCESTRAL SPECIES 22 ENSGT00390000006954 ENSGT00950000183054.a.a.b ENSGT00940000155429.b ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000155857.f.a ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000182228 ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Japanese Medaka HdrR DUPLICATION Japanese Medaka HdrR MODERN SPECIES 23 ANTXR1 (ENSORLG00000011277) ENSORLG00000025947 kansl3 (ENSORLG00000011216) bmp1a (ENSORLG00000011156) DISP3 (ENSORLG00000011151) ENSORLG00000011119 zgc:56596 (ENSORLG00000011070) ENSORLG00000011059 ENSORLG00000011037 BIN3 (ENSORLG00000011000) egr3 (ENSORLG00000010985) PEBP4 (ENSORLG00000029198) RHOBTB2 (ENSORLG00000010981) ido1 (ENSORLG00000010957) stc1 (ENSORLG00000030435) nkx2.7 (ENSORLG00000010932) #22 nkx3-1 (ENSORLG00000027421) slc25a37 (ENSORLG00000010917) entpd4 (ENSORLG00000010898) si:ch211-214j8.12 (ENSORLG00000028600) gda (ENSORLG00000010864) zgc:101016 (ENSORLG00000010809) abhd17b (ENSORLG00000010800) cemip2 (ENSORLG00000010792) TRPM3 (ENSORLG00000010741) klf9 (ENSORLG00000010690) fam219ab (ENSORLG00000010685) ENSORLG00000025017 ela3l (ENSORLG00000010663) bco2l (ENSORLG00000010630) ENSORLG00000010566 Japanese Medaka HdrR MODERN SPECIES 1 tspan17 (ENSORLG00000007154) ENSORLG00000022255 ctnna1 (ENSORLG00000007191) LRRTM2 (ENSORLG00000007202) sncb (ENSORLG00000007216) ENSORLG00000007236 ENSORLG00000023063 ENSORLG00000029454 rnf44 (ENSORLG00000007256) faf2 (ENSORLG00000007289) pin4 (ENSORLG00000007301) ENSORLG00000007303 cpeb4a (ENSORLG00000007328) STC2 (ENSORLG00000023476) ENSORLG00000022613 nkx2.5 (ENSORLG00000007346) #22 BNIP1 (ENSORLG00000007358) #23 atp6v0e1 (ENSORLG00000007362) #25 rpl26 (ENSORLG00000007374) ENSORLG00000007398 GPR151 (ENSORLG00000007403) ENSORLG00000007413 thg1l (ENSORLG00000007424) LSM11 (ENSORLG00000007434) clint1a (ENSORLG00000007455) EBF1 (ENSORLG00000007471) il12ba (ENSORLG00000007477) adrb2a (ENSORLG00000007484) SH3TC2 (ENSORLG00000007524) ablim3 (ENSORLG00000007590) afap1l1a (ENSORLG00000007636) Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 1085 ANTXR1 (ENSOSIG00000011774) ENSOSIG00000014337 kansl3 (ENSOSIG00000014338) bmp1a (ENSOSIG00000014496) DISP3 (ENSOSIG00000020712) ENSOSIG00000020742 zgc:56596 (ENSOSIG00000020772) ENSOSIG00000020776 ENSOSIG00000020843 BIN3 (ENSOSIG00000021430) egr3 (ENSOSIG00000021431) PEBP4 (ENSOSIG00000021432) RHOBTB2 (ENSOSIG00000021437) ido1 (ENSOSIG00000021444) stc1 (ENSOSIG00000021445) nkx2.7 (ENSOSIG00000021446) #22 nkx3-1 (ENSOSIG00000021447) slc25a37 (ENSOSIG00000021448) entpd4 (ENSOSIG00000021454) si:ch211-214j8.12 (ENSOSIG00000021512) gda (ENSOSIG00000021538) zgc:101016 (ENSOSIG00000021843) abhd17b (ENSOSIG00000021846) cemip2 (ENSOSIG00000021918) TRPM3 (ENSOSIG00000022006) klf9 (ENSOSIG00000022302) fam219ab (ENSOSIG00000022307) ENSOSIG00000022309 bco2l (ENSOSIG00000022346) ENSOSIG00000022495 LZTS1 (ENSOSIG00000022500) Chinese medaka MODERN SPECIES 25 tspan17 (ENSOSIG00000021249) LRRTM2 (ENSOSIG00000021254) ctnna1 (ENSOSIG00000021274) ENSOSIG00000021306 sncb (ENSOSIG00000021312) ENSOSIG00000021315 ENSOSIG00000021319 ENSOSIG00000021323 rnf44 (ENSOSIG00000021343) faf2 (ENSOSIG00000021358) pin4 (ENSOSIG00000021373) DRD1 (ENSOSIG00000021374) cpeb4a (ENSOSIG00000021387) STC2 (ENSOSIG00000021416) ENSOSIG00000021417 nkx2.5 (ENSOSIG00000021419) #22 BNIP1 (ENSOSIG00000021421) #23 atp6v0e1 (ENSOSIG00000021424) #25 rpl26 (ENSOSIG00000021426) ENSOSIG00000021439 GPR151 (ENSOSIG00000021853) ENSOSIG00000021855 ADAM19 (ENSOSIG00000021886) thg1l (ENSOSIG00000021893) LSM11 (ENSOSIG00000021896) clint1a (ENSOSIG00000021908) EBF1 (ENSOSIG00000022001) il12ba (ENSOSIG00000022253) adrb2a (ENSOSIG00000022258) SH3TC2 (ENSOSIG00000022265) ablim3 (ENSOSIG00000022277) Ovalentaria_B ANCESTRAL SPECIES 13 ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Cichlidae ANCESTRAL SPECIES 8 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT01090000260639 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Midas cichlid MODERN SPECIES 189 sncb (ENSACIG00000016985) ENSACIG00000016974 ENSACIG00000016951 rnf44 (ENSACIG00000016925) faf2 (ENSACIG00000016895) pin4 (ENSACIG00000016863) ENSACIG00000016844 DRD1 (ENSACIG00000016838) ENSACIG00000016833 cpeb4a (ENSACIG00000016815) STC2 (ENSACIG00000016800) nkx2.5 (ENSACIG00000016790) #22 BNIP1 (ENSACIG00000016771) #23 atp6v0e1 (ENSACIG00000016760) #25 rpl26 (ENSACIG00000016752) ENSACIG00000016718 GPR151 (ENSACIG00000016712) ADAM19 (ENSACIG00000016009) thg1l (ENSACIG00000015946) LSM11 (ENSACIG00000015937) clint1a (ENSACIG00000015914) EBF1 (ENSACIG00000015886) il12ba (ENSACIG00000015872) adrb2a (ENSACIG00000015862) SH3TC2 (ENSACIG00000015791) ablim3 (ENSACIG00000015752) afap1l1a (ENSACIG00000015699) Pseudocrenilabrinae ANCESTRAL SPECIES 17 ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT01090000260639 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Nile tilapia MODERN SPECIES 11 ENSONIG00000036117 tspan17 (ENSONIG00000017712) ENSONIG00000017711 ctnna1 (ENSONIG00000017702) LRRTM2 (ENSONIG00000017710) sncb (ENSONIG00000038993) ENSONIG00000038582 ENSONIG00000041389 ENSONIG00000017698 rnf44 (ENSONIG00000028427) faf2 (ENSONIG00000017695) nek12 (ENSONIG00000017689) msx2a (ENSONIG00000017685) cpeb4a (ENSONIG00000017682) stc2 (ENSONIG00000029953) nkx2.5 (ENSONIG00000017679) #22 BNIP1 (ENSONIG00000017678) #23 atp6v0e1 (ENSONIG00000028024) #25 rpl26 (ENSONIG00000017676) ENSONIG00000017671 GPR151 (ENSONIG00000029838) ENSONIG00000017665 thg1l (ENSONIG00000017663) LSM11 (ENSONIG00000017657) clint1a (ENSONIG00000017658) EBF1 (ENSONIG00000017655) il12ba (ENSONIG00000017652) adrb2a (ENSONIG00000020577) SH3TC2 (ENSONIG00000017645) ablim3 (ENSONIG00000017632) afap1l1a (ENSONIG00000017624) Pseudocrenilabrinae_A ANCESTRAL SPECIES 20 ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT01090000260639 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Haplochromini ANCESTRAL SPECIES 14 ENSGT01030000234543.A.b.j.b ENSGT00940000160581 ENSGT01030000234543.A.b.k ENSGT00950000183175.B.a ENSGT01090000260639 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Haplochromini_A ANCESTRAL SPECIES 13 ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b.k ENSGT00950000183175.B.a ENSGT01090000260639 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Haplochromini_B ANCESTRAL SPECIES 7 ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b.k ENSGT00950000183175.B.a ENSGT01090000260639 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b ENSGT00950000183067.a.b.a.d Eastern happy MODERN SPECIES 11 ENSACLG00000002395 LRRTM2 (ENSACLG00000002386) ctnna1 (ENSACLG00000002300) ENSACLG00000002280 sncb (ENSACLG00000002272) ENSACLG00000002267 ENSACLG00000002231 rnf44 (ENSACLG00000002195) faf2 (ENSACLG00000002149) nek12 (ENSACLG00000002128) DRD1 (ENSACLG00000002123) msx2a (ENSACLG00000002114) pin4 (ENSACLG00000002103) cpeb4a (ENSACLG00000001821) STC2 (ENSACLG00000001808) nkx2.5 (ENSACLG00000001803) #22 BNIP1 (ENSACLG00000001742) #23 atp6v0e1 (ENSACLG00000001656) #25 rpl26 (ENSACLG00000001623) ENSACLG00000001580 GPR151 (ENSACLG00000001567) ENSACLG00000001513 thg1l (ENSACLG00000001490) LSM11 (ENSACLG00000001470) clint1a (ENSACLG00000001440) EBF1 (ENSACLG00000001374) il12ba (ENSACLG00000001346) adrb2a (ENSACLG00000001339) SH3TC2 (ENSACLG00000001215) ablim3 (ENSACLG00000001009) afap1l1a (ENSACLG00000000985) Zebra mbuna MODERN SPECIES 1102 ENSMZEG00005009289 LRRTM2 (ENSMZEG00005009286) ctnna1 (ENSMZEG00005009239) sncb (ENSMZEG00005009208) ENSMZEG00005009185 ENSMZEG00005009175 ENSMZEG00005009149 rnf44 (ENSMZEG00005009112) faf2 (ENSMZEG00005009052) pin4 (ENSMZEG00005009035) nek12 (ENSMZEG00005009027) DRD1 (ENSMZEG00005009012) msx2a (ENSMZEG00005009006) cpeb4a (ENSMZEG00005008957) STC2 (ENSMZEG00005008946) nkx2.5 (ENSMZEG00005008933) #22 BNIP1 (ENSMZEG00005008908) #23 atp6v0e1 (ENSMZEG00005008895) #25 rpl26 (ENSMZEG00005008869) ENSMZEG00005008829 GPR151 (ENSMZEG00005008821) ENSMZEG00005008796 thg1l (ENSMZEG00005008770) LSM11 (ENSMZEG00005008755) clint1a (ENSMZEG00005008620) EBF1 (ENSMZEG00005008525) il12ba (ENSMZEG00005008489) ENSMZEG00005008456 adrb2a (ENSMZEG00005008409) SH3TC2 (ENSMZEG00005008353) ablim3 (ENSMZEG00005008291) P. nyererei MODERN SPECIES 296 ENSPNYG00000000191 tspan17 (ENSPNYG00000000190) ENSPNYG00000000189 LRRTM2 (ENSPNYG00000000188) ctnna1 (ENSPNYG00000000187) sncb (ENSPNYG00000000186) ENSPNYG00000000185 rnf44 (ENSPNYG00000000184) faf2 (ENSPNYG00000000183) pin4 (ENSPNYG00000000182) nek12 (ENSPNYG00000000181) DRD1 (ENSPNYG00000000180) msx2a (ENSPNYG00000000179) cpeb4a (ENSPNYG00000000178) STC2 (ENSPNYG00000000177) nkx2.5 (ENSPNYG00000000176) #22 BNIP1 (ENSPNYG00000000175) #23 atp6v0e1 (ENSPNYG00000000174) #25 rpl26 (ENSPNYG00000000173) ENSPNYG00000000172 GPR151 (ENSPNYG00000000171) ADAM19 (ENSPNYG00000000170) thg1l (ENSPNYG00000000169) LSM11 (ENSPNYG00000000168) clint1a (ENSPNYG00000000167) EBF1 (ENSPNYG00000000166) il12ba (ENSPNYG00000000165) adrb2a (ENSPNYG00000000164) SH3TC2 (ENSPNYG00000000163) ablim3 (ENSPNYG00000000162) afap1l1a (ENSPNYG00000000161) Burton s mouthbrooder MODERN SPECIES 284 ENSHBUG00000004454 ctnna1 (ENSHBUG00000004442) LRRTM2 (ENSHBUG00000004397) sncb (ENSHBUG00000004387) ENSHBUG00000004372 ENSHBUG00000004352 ENSHBUG00000004331 rnf44 (ENSHBUG00000004306) faf2 (ENSHBUG00000004269) pin4 (ENSHBUG00000004242) nek12 (ENSHBUG00000004233) DRD1 (ENSHBUG00000004226) msx2a (ENSHBUG00000004219) cpeb4a (ENSHBUG00000004215) STC2 (ENSHBUG00000004169) nkx2.5 (ENSHBUG00000004161) #22 BNIP1 (ENSHBUG00000004144) #23 atp6v0e1 (ENSHBUG00000004116) #25 rpl26 (ENSHBUG00000004103) ENSHBUG00000004086 GPR151 (ENSHBUG00000004045) ENSHBUG00000004038 thg1l (ENSHBUG00000004025) LSM11 (ENSHBUG00000004016) clint1a (ENSHBUG00000003990) EBF1 (ENSHBUG00000003918) il12ba (ENSHBUG00000003827) adrb2a (ENSHBUG00000003812) SH3TC2 (ENSHBUG00000003801) ablim3 (ENSHBUG00000003776) afap1l1a (ENSHBUG00000003720) Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 296 ENSNBRG00000022290 kansl3 (ENSNBRG00000022309) bmp1a (ENSNBRG00000022340) DISP3 (ENSNBRG00000022383) ENSNBRG00000022415 zgc:56596 (ENSNBRG00000022441) ENSNBRG00000022470 ENSNBRG00000022575 BIN3 (ENSNBRG00000022598) egr3 (ENSNBRG00000022604) PEBP4 (ENSNBRG00000022610) RHOBTB2 (ENSNBRG00000022615) ido1 (ENSNBRG00000022628) ENSNBRG00000022638 stc1 (ENSNBRG00000022644) nkx2.7 (ENSNBRG00000022652) #22 nkx3-1 (ENSNBRG00000022658) slc25a37 (ENSNBRG00000022672) entpd4 (ENSNBRG00000022703) si:ch211-214j8.12 (ENSNBRG00000022724) gda (ENSNBRG00000022735) zgc:101016 (ENSNBRG00000022747) abhd17b (ENSNBRG00000022753) cemip2 (ENSNBRG00000022766) TRPM3 (ENSNBRG00000022822) klf9 (ENSNBRG00000022864) fam219ab (ENSNBRG00000022877) ENSNBRG00000022886 ela3l (ENSNBRG00000022894) bco2l (ENSNBRG00000022912) ENSNBRG00000022939 Lyretail cichlid MODERN SPECIES 292 tspan17 (ENSNBRG00000015932) ENSNBRG00000015951 ctnna1 (ENSNBRG00000015964) LRRTM2 (ENSNBRG00000016008) sncb (ENSNBRG00000016025) ENSNBRG00000016089 ENSNBRG00000016109 rnf44 (ENSNBRG00000016131) faf2 (ENSNBRG00000016161) pin4 (ENSNBRG00000016184) nek12 (ENSNBRG00000016228) DRD1 (ENSNBRG00000016428) msx2a (ENSNBRG00000016440) cpeb4a (ENSNBRG00000016474) STC2 (ENSNBRG00000016511) nkx2.5 (ENSNBRG00000016525) #22 BNIP1 (ENSNBRG00000016563) #23 atp6v0e1 (ENSNBRG00000016585) #25 rpl26 (ENSNBRG00000016596) ENSNBRG00000016625 GPR151 (ENSNBRG00000016675) ADAM19 (ENSNBRG00000016976) thg1l (ENSNBRG00000017747) LSM11 (ENSNBRG00000017775) clint1a (ENSNBRG00000017805) EBF1 (ENSNBRG00000017864) il12ba (ENSNBRG00000017908) adrb2a (ENSNBRG00000017928) SH3TC2 (ENSNBRG00000017949) ablim3 (ENSNBRG00000018020) afap1l1a (ENSNBRG00000018184) Pomacentridae ANCESTRAL SPECIES 4 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b.a ENSGT00950000183067.a.b.a.d Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 803 gfpt1 (ENSSPAG00000010536) ANTXR1 (ENSSPAG00000010622) kansl3 (ENSSPAG00000010718) bmp1a (ENSSPAG00000010831) DISP3 (ENSSPAG00000010907) ENSSPAG00000011027 zgc:56596 (ENSSPAG00000011087) ENSSPAG00000011099 ENSSPAG00000011145 BIN3 (ENSSPAG00000011183) egr3 (ENSSPAG00000011198) PEBP4 (ENSSPAG00000011204) RHOBTB2 (ENSSPAG00000011219) ido1 (ENSSPAG00000011258) stc1 (ENSSPAG00000011337) nkx2.7 (ENSSPAG00000011360) #22 nkx3-1 (ENSSPAG00000011365) Bicolor damselfish MODERN SPECIES 400 pin4 (ENSSPAG00000008483) nek12 (ENSSPAG00000008491) DRD1 (ENSSPAG00000008498) msx2a (ENSSPAG00000008502) cpeb4a (ENSSPAG00000008532) STC2 (ENSSPAG00000008573) nkx2.5 (ENSSPAG00000008586) #22 BNIP1 (ENSSPAG00000008611) #23 atp6v0e1 (ENSSPAG00000008628) #25 rpl26 (ENSSPAG00000008645) ENSSPAG00000008661 GPR151 (ENSSPAG00000008694) ENSSPAG00000008702 thg1l (ENSSPAG00000008744) LSM11 (ENSSPAG00000008768) clint1a (ENSSPAG00000008774) EBF1 (ENSSPAG00000008807) il12ba (ENSSPAG00000008911) adrb2a (ENSSPAG00000008929) SH3TC2 (ENSSPAG00000008941) ablim3 (ENSSPAG00000008984) ENSSPAG00000009018 Pomacentridae_A ANCESTRAL SPECIES 17 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000162796.b ENSGT00940000165849 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000164716.A ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b.a ENSGT00950000183067.a.b.a.d Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 422 egr3 (ENSAPOG00000012106) ENSAPOG00000012084 RHOBTB2 (ENSAPOG00000012065) ido1 (ENSAPOG00000012037) stc1 (ENSAPOG00000012018) nkx2.7 (ENSAPOG00000012000) #22 ENSAPOG00000011986 slc25a37 (ENSAPOG00000011963) entpd4 (ENSAPOG00000011935) si:ch211-214j8.12 (ENSAPOG00000011882) gda (ENSAPOG00000011863) zgc:101016 (ENSAPOG00000011845) abhd17b (ENSAPOG00000011822) cemip2 (ENSAPOG00000001066) TRPM3 (ENSAPOG00000000742) mibp2 (ENSAPOG00000011574) klf9 (ENSAPOG00000011557) fam219ab (ENSAPOG00000011548) bco2l (ENSAPOG00000011518) ENSAPOG00000011486 ela3l (ENSAPOG00000011467) Spiny chromis MODERN SPECIES 460 sncb (ENSAPOG00000007078) ENSAPOG00000007055 ENSAPOG00000007045 ENSAPOG00000007033 rnf44 (ENSAPOG00000007018) faf2 (ENSAPOG00000006970) pin4 (ENSAPOG00000006931) nek12 (ENSAPOG00000006924) DRD1 (ENSAPOG00000006907) msx2a (ENSAPOG00000006903) cpeb4a (ENSAPOG00000006896) STC2 (ENSAPOG00000006858) BNIP1 (ENSAPOG00000006842) #23 nkx2.5 (ENSAPOG00000006827) #22 atp6v0e1 (ENSAPOG00000006801) #25 rpl26 (ENSAPOG00000006788) ENSAPOG00000006758 GPR151 (ENSAPOG00000006721) Amphiprion ANCESTRAL SPECIES 26 ENSGT00940000166166 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00950000183175.B.a ENSGT00940000177070 ENSGT00940000165849 ENSGT00940000162796.b ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00510000047029 ENSGT00940000165959 ENSGT00940000155857.f.a ENSGT00940000159824 ENSGT00940000154998.a.b ENSGT00390000005989.a.b.a.a ENSGT00940000158996 #22 ENSGT00390000014412.l #23 ENSGT00940000156866 #25 ENSGT00390000014165 ENSGT00950000182864.a.b.b.a.b.a.b ENSGT01030000234518.A.a.b ENSGT00940000159624 ENSGT00390000011705 ENSGT00390000012944 ENSGT00940000155650.a.a ENSGT00950000182859.A.a.b.b.d.c.a ENSGT00390000012630.A.b ENSGT00940000159538.g.a ENSGT00530000063812.B ENSGT00950000182850.a.b.a.b.a.b.a ENSGT00950000183067.a.b.a.d Clown anemonefish DUPLICATION Clown anemonefish MODERN SPECIES 1746 ENSAOCG00000014867 DISP3 (ENSAOCG00000001024) ENSAOCG00000014970 zgc:56596 (ENSAOCG00000014989) ENSAOCG00000015100 ENSAOCG00000015136 BIN3 (ENSAOCG00000001057) egr3 (ENSAOCG00000015187) PEBP4 (ENSAOCG00000015223) RHOBTB2 (ENSAOCG00000015270) ido1 (ENSAOCG00000015332) stc1 (ENSAOCG00000015373) nkx2.7 (ENSAOCG00000015388) #22 nkx3-1 (ENSAOCG00000015398) slc25a37 (ENSAOCG00000015454) entpd4 (ENSAOCG00000002708) si:ch211-214j8.12 (ENSAOCG00000015508) gda (ENSAOCG00000015531) zgc:101016 (ENSAOCG00000015538) abhd17b (ENSAOCG00000015553) cemip2 (ENSAOCG00000015627) Clown anemonefish MODERN SPECIES 3322 pin4 (ENSAOCG00000015898) nek12 (ENSAOCG00000015866) DRD1 (ENSAOCG00000015856) MSX2 (ENSAOCG00000015848) cpeb4a (ENSAOCG00000015830) STC2 (ENSAOCG00000015774) BNIP1 (ENSAOCG00000001092) #23 nkx2.5 (ENSAOCG00000001088) #22 atp6v0e1 (ENSAOCG00000015692) #25 rpl26 (ENSAOCG00000015670) ENSAOCG00000015657 GPR151 (ENSAOCG00000015625) ENSAOCG00000015615 thg1l (ENSAOCG00000015583) LSM11 (ENSAOCG00000015560) clint1a (ENSAOCG00000015555) EBF1 (ENSAOCG00000015500) il12ba (ENSAOCG00000015400) adrb2a (ENSAOCG00000015368) SH3TC2 (ENSAOCG00000015347) ablim3 (ENSAOCG00000015274) afap1l1a (ENSAOCG00000015204) ENSAOCG00000002171 Orange clownfish DUPLICATION Orange clownfish MODERN SPECIES 19 gfpt1 (ENSAPEG00000014907) nfu1 (ENSAPEG00000014977) zgc:103692 (ENSAPEG00000015013) ENSAPEG00000015052 DISP3 (ENSAPEG00000015090) ENSAPEG00000015174 zgc:56596 (ENSAPEG00000015255) ENSAPEG00000015282 ENSAPEG00000015387 BIN3 (ENSAPEG00000015488) egr3 (ENSAPEG00000015517) PEBP4 (ENSAPEG00000015538) RHOBTB2 (ENSAPEG00000015554) ido1 (ENSAPEG00000015570) stc1 (ENSAPEG00000015603) nkx2.7 (ENSAPEG00000015616) #22 nkx3-1 (ENSAPEG00000015626) slc25a37 (ENSAPEG00000015635) entpd4 (ENSAPEG00000015649) si:ch211-214j8.12 (ENSAPEG00000015698) gda (ENSAPEG00000015707) zgc:101016 (ENSAPEG00000015716) abhd17b (ENSAPEG00000015733) cemip2 (ENSAPEG00000015754) TRPM3 (ENSAPEG00000015893) klf9 (ENSAPEG00000015963) fam219ab (ENSAPEG00000015972) ENSAPEG00000016008 ela3l (ENSAPEG00000016020) bco2l (ENSAPEG00000016072) ENSAPEG00000016409 Orange clownfish MODERN SPECIES 4 tspan17 (ENSAPEG00000012330) ENSAPEG00000012324 LRRTM2 (ENSAPEG00000012313) ctnna1 (ENSAPEG00000012214) sncb (ENSAPEG00000012168) ENSAPEG00000012153 ENSAPEG00000012124 rnf44 (ENSAPEG00000012064) faf2 (ENSAPEG00000011987) pin4 (ENSAPEG00000011970) nek12 (ENSAPEG00000011950) DRD1 (ENSAPEG00000011939) ENSAPEG00000011927 cpeb4a (ENSAPEG00000011894) STC2 (ENSAPEG00000011880) nkx2.5 (ENSAPEG00000011853) #22 BNIP1 (ENSAPEG00000011824) #23 atp6v0e1 (ENSAPEG00000011795) #25 rpl26 (ENSAPEG00000011777) ENSAPEG00000011721 GPR151 (ENSAPEG00000011707) ENSAPEG00000011683 thg1l (ENSAPEG00000011671) LSM11 (ENSAPEG00000011659) clint1a (ENSAPEG00000011645) EBF1 (ENSAPEG00000011584) il12ba (ENSAPEG00000011572) adrb2a (ENSAPEG00000011560) SH3TC2 (ENSAPEG00000011464) ablim3 (ENSAPEG00000011381) afap1l1a (ENSAPEG00000011329) Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 343 camsap1b (ENSHCOG00000018323) ENSHCOG00000018262 kansl3 (ENSHCOG00000018231) bmp1a (ENSHCOG00000018138) DISP3 (ENSHCOG00000018078) ENSHCOG00000018024 zgc:56596 (ENSHCOG00000017977) ENSHCOG00000017962 ENSHCOG00000017911 BIN3 (ENSHCOG00000017860) egr3 (ENSHCOG00000017849) PEBP4 (ENSHCOG00000017843) RHOBTB2 (ENSHCOG00000017836) ido1 (ENSHCOG00000017810) stc1 (ENSHCOG00000017781) nkx2.7 (ENSHCOG00000017759) #22 nkx3-1 (ENSHCOG00000017739) slc25a37 (ENSHCOG00000017723) entpd4 (ENSHCOG00000017717) si:ch211-214j8.12 (ENSHCOG00000017686) gda (ENSHCOG00000017678) zgc:101016 (ENSHCOG00000017664) abhd17b (ENSHCOG00000017658) cemip2 (ENSHCOG00000017640) TRPM3 (ENSHCOG00000017623) klf9 (ENSHCOG00000017562) fam219ab (ENSHCOG00000017553) ENSHCOG00000017520 ela3l (ENSHCOG00000017510) bco2l (ENSHCOG00000017479) ENSHCOG00000017221 Tiger tail seahorse MODERN SPECIES 413 ENSHCOG00000003405 slit3 (ENSHCOG00000003472) SEC24B (ENSHCOG00000003510) ENSHCOG00000003532 arl9 (ENSHCOG00000003535) setd7 (ENSHCOG00000003551) zgc:113425 (ENSHCOG00000003561) rab33ba (ENSHCOG00000003569) hspa9 (ENSHCOG00000003602) SLITRK2 (ENSHCOG00000003622) ENSHCOG00000003655 cpeb4a (ENSHCOG00000003707) STC2 (ENSHCOG00000003727) nkx2.5 (ENSHCOG00000003745) #22 BNIP1 (ENSHCOG00000003762) #23 atp6v0e1 (ENSHCOG00000003770) #25 rpl26 (ENSHCOG00000003784) ENSHCOG00000003819 GPR151 (ENSHCOG00000003832) ADAM19 (ENSHCOG00000003858)