Tetrapoda	ANCESTRAL SPECIES	29	ENSGT00510000046929.b	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00390000014165.d	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b
Amniota	ANCESTRAL SPECIES	17	ENSGT00510000046929.b	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b
Mammalia	ANCESTRAL SPECIES	32	ENSGT00510000046929.b	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31
Theria	ANCESTRAL SPECIES	18	ENSGT00510000046929.b	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37
Eutheria	ANCESTRAL SPECIES	6	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00900000143489	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00900000143489	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b
Glires	ANCESTRAL SPECIES	7	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b
Rodentia	ANCESTRAL SPECIES	7	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00940000167072	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.b.b.b.q	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b.d
Myomorpha	ANCESTRAL SPECIES	28											ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.b.b.b.q	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b.d
Muroidea	ANCESTRAL SPECIES	10	ENSGT00950000183213.a.a.b #7	ENSGT00940000162598 #9	ENSGT00940000154590 #8	ENSGT00940000158623 #11	ENSGT00390000015916 #12	ENSGT00390000009825 #13	ENSGT00940000156278 #14	ENSGT00390000002628 #15	ENSGT00550000075071	ENSGT00510000049125 #16	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.b.b.b.q	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b.d
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00530000063694.a	ENSGT00950000183213.a.a.b #7	ENSGT00940000162598 #9	ENSGT00940000154590 #8	ENSGT00940000158623 #11	ENSGT00390000015916 #12	ENSGT00390000009825 #13	ENSGT00940000156278 #14	ENSGT00390000002628 #15	ENSGT00510000049125 #16	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b.d	ENSGT00940000160629
Cricetidae	ANCESTRAL SPECIES		ENSGT00530000063694.a	ENSGT00950000183213.a.a.b #7	ENSGT00940000162598 #9	ENSGT00940000154590 #8	ENSGT00940000158623 #11	ENSGT00390000015916 #12	ENSGT00390000009825 #13	ENSGT00940000156278 #14	ENSGT00390000002628 #15	ENSGT00510000049125 #16	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b.d.d.b	ENSGT00940000160629
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00530000063694.a	ENSGT00950000183213.a.a.b #7	ENSGT00940000162598 #9	ENSGT00940000154590 #8	ENSGT00940000158623 #11	ENSGT00390000015916 #12	ENSGT00390000009825 #13	ENSGT00940000156278 #14	ENSGT00390000002628 #15	ENSGT00510000049125 #16	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b.d.d.b.a	ENSGT00940000160629
Northern American deer mouse	MODERN SPECIES	21	Luc7l (ENSPEMG00000011291) #7	ENSPEMG00000027669 #8	ENSPEMG00000029677 #9	ENSPEMG00000030709 #10	Hba-x (ENSPEMG00000011750) #11	Nprl3 (ENSPEMG00000018260) #12	Mpg (ENSPEMG00000013129) #13	ENSPEMG00000025652 #14	Snrnp25 (ENSPEMG00000000454) #15	Il9r (ENSPEMG00000015108) #16	Nsg2 (ENSPEMG00000029190) #17	4930524B15Rik (ENSPEMG00000016302) #18	Cpeb4 (ENSPEMG00000025728) #19	ENSPEMG00000030821 #20	Stc2 (ENSPEMG00000031170) #21	Nkx2-5 (ENSPEMG00000012263) #22	Bnip1 (ENSPEMG00000014579) #23	Crebrf (ENSPEMG00000019136) #24	Atp6v0e (ENSPEMG00000016171) #25	Ergic1 (ENSPEMG00000011371) #26	ENSPEMG00000029256 #27	Dusp1 (ENSPEMG00000008974) #28	Neurl1b (ENSPEMG00000018647) #29	Sh3pxd2b (ENSPEMG00000011209) #30	Ubtd2 (ENSPEMG00000028774) #31	Efcab9 (ENSPEMG00000012516) #32	Stk10 (ENSPEMG00000016749) #33	Fbxw11 (ENSPEMG00000014614) #34	Smim23 (ENSPEMG00000009648) #35	ENSPEMG00000005862 #36	Fgf18 (ENSPEMG00000027707) #37
Prairie vole	MODERN SPECIES	15	Luc7l (ENSMOCG00000022342) #7	ENSMOCG00000011391 #9	ENSMOCG00000016063 #8	ENSMOCG00000022598 #9	ENSMOCG00000018254 #8	Hba-x (ENSMOCG00000014714) #11	Nprl3 (ENSMOCG00000019243) #12	Mpg (ENSMOCG00000003994) #13	Rhbdf1 (ENSMOCG00000016377) #14	Snrnp25 (ENSMOCG00000014142) #15	Il9r (ENSMOCG00000015710) #16	Nsg2 (ENSMOCG00000013492) #17	Cpeb4 (ENSMOCG00000022941) #19	Bod1 (ENSMOCG00000010082) #20	Stc2 (ENSMOCG00000008034) #21	Nkx2-5 (ENSMOCG00000018760) #22	Bnip1 (ENSMOCG00000003864) #23	ENSMOCG00000004676 #24	Atp6v0e (ENSMOCG00000003266) #25	Ergic1 (ENSMOCG00000014403) #26	Dusp1 (ENSMOCG00000022124) #28	Neurl1b (ENSMOCG00000019556) #29
Cricetinae	ANCESTRAL SPECIES		ENSGT00950000183213.a.a.b #7	ENSGT00940000154590 #8	ENSGT00940000162598 #9	ENSGT00940000158623 #11	ENSGT00390000015916 #12	ENSGT00390000009825 #13	ENSGT00940000156278 #14	ENSGT00390000002628 #15	ENSGT00510000049125 #16	ENSGT00940000167072	ENSGT00640000091672 #18	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b.d.d.a.a.a	ENSGT00940000160629
Chinese hamster chok1gshd	MODERN SPECIES	229	ENSCGRG00001022538 #8	ENSCGRG00001024697 #9	Hba-x (ENSCGRG00001024784) #11	Nprl3 (ENSCGRG00001009894) #12	Mpg (ENSCGRG00001016501) #13	Rhbdf1 (ENSCGRG00001001539) #14	Snrnp25 (ENSCGRG00001020306) #15	Il9r (ENSCGRG00001023103) #16	Nsg2 (ENSCGRG00001010888) #17	ENSCGRG00001013841	4930524B15Rik (ENSCGRG00001017897) #18	ENSCGRG00001019946	Cpeb4 (ENSCGRG00001021805) #19	Bod1 (ENSCGRG00001023221) #20	Stc2 (ENSCGRG00001023337) #21	Nkx2-5 (ENSCGRG00001024735) #22	Bnip1 (ENSCGRG00001000805) #23	Crebrf (ENSCGRG00001007231) #24	Atp6v0e (ENSCGRG00001022946) #25	Ergic1 (ENSCGRG00001024104) #26	Dusp1 (ENSCGRG00001019246) #28	Neurl1b (ENSCGRG00001022855) #29	Sh3pxd2b (ENSCGRG00001010764) #30	Ubtd2 (ENSCGRG00001022026) #31	Efcab9 (ENSCGRG00001001253) #32	Stk10 (ENSCGRG00001013751) #33	Fbxw11 (ENSCGRG00001016029) #34	Smim23 (ENSCGRG00001015541) #35	Fgf18 (ENSCGRG00001017188) #37	ENSCGRG00001001985	Tlx3 (ENSCGRG00001015510)
Golden Hamster	MODERN SPECIES	861															Stc2 (ENSMAUG00000008254) #21	Nkx2-5 (ENSMAUG00000007694) #22	Bnip1 (ENSMAUG00000016525) #23	Crebrf (ENSMAUG00000016495) #24	Atp6v0e (ENSMAUG00000013929) #25	Ergic1 (ENSMAUG00000019097) #26	Dusp1 (ENSMAUG00000008804) #28	Neurl1b (ENSMAUG00000009175) #29	ENSMAUG00000001948 #30	Ubtd2 (ENSMAUG00000000209) #31	Efcab9 (ENSMAUG00000012647) #32
Murinae	ANCESTRAL SPECIES	7	ENSGT00530000063694.a	ENSGT00950000183213.a.a.b #7	ENSGT00940000162598 #9	ENSGT00940000154590 #8	ENSGT00940000158623 #11	ENSGT00390000015916 #12	ENSGT00390000009825 #13	ENSGT00940000156278 #14	ENSGT00390000002628 #15	ENSGT00510000049125 #16	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b.d.b.b	ENSGT00940000160629
Mus	ANCESTRAL SPECIES	21	ENSGT00940000157882	ENSGT00410000025882.b	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00940000160955	ENSGT00940000160887	ENSGT00510000048041	ENSGT00940000157078	ENSGT00390000006663	ENSGT01090000260100.A	ENSGT00940000162408	ENSGT00940000158438	ENSGT00390000017030.b.b	ENSGT00950000183180.a.b	ENSGT00940000161735	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00950000183213.a.a.b #7	ENSGT00530000063694.a	ENSGT00940000160198	ENSGT00390000006233.c.a.a	ENSGT00940000161859	ENSGT00940000156947	ENSGT00390000017359	ENSGT00940000160060	ENSGT00940000160286
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000157882	ENSGT00410000025882.b	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00940000160955	ENSGT00940000160887	ENSGT00510000048041	ENSGT00940000157078	ENSGT00390000006663	ENSGT01090000260100.A	ENSGT00940000162408	ENSGT00940000158438	ENSGT00390000017030.b.b	ENSGT00950000183180.a.b	ENSGT00940000161735.k	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00950000183213.a.a.b #7	ENSGT00530000063694.a	ENSGT00940000160198	ENSGT00390000006233.c.a.a	ENSGT00940000161859	ENSGT00940000156947	ENSGT00390000017359	ENSGT00940000160060	ENSGT00940000160286
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000157882	ENSGT00410000025882.b	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00940000160955	ENSGT00940000160887	ENSGT00510000048041	ENSGT00940000157078	ENSGT00390000006663	ENSGT01090000260100.A	ENSGT00940000162408	ENSGT00940000158438	ENSGT00390000017030.b.b	ENSGT00950000183180.a.b	ENSGT00940000161735.k	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00950000183213.a.a.b #7	ENSGT00530000063694.a	ENSGT00940000160198	ENSGT00390000006233.c.a.a	ENSGT00940000161859	ENSGT00940000156947	ENSGT00390000017359	ENSGT00940000160060	ENSGT00940000160286
Mus_C	ANCESTRAL SPECIES	9	ENSGT00940000157882	ENSGT00410000025882.b	ENSGT00730000111329	ENSGT01030000234648.a.b.a.a.a	ENSGT00940000160955	ENSGT00940000160887	ENSGT00510000048041	ENSGT00940000157078	ENSGT00390000006663	ENSGT01090000260100.A	ENSGT00940000162408	ENSGT00940000158438	ENSGT00390000017030.b.b	ENSGT00950000183180.a.b	ENSGT00940000161735.k	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00950000183213.a.a.b #7	ENSGT00530000063694.a	ENSGT00940000160198	ENSGT00390000006233.c.a.a	ENSGT00940000161859	ENSGT00940000156947	ENSGT00390000017359	ENSGT00940000160060	ENSGT00940000160286
Steppe mouse	MODERN SPECIES	2698																Nkx2-5 (ENSMSIG00000025708) #22	Bnip1 (ENSMSIG00000025666) #23	Crebrf (ENSMSIG00000025640) #24	ENSMSIG00000025620 #25	Ergic1 (ENSMSIG00000025604) #26	ENSMSIG00000025591	Dusp1 (ENSMSIG00000025579) #28	ENSMSIG00000025563	Neurl1b (ENSMSIG00000025549) #29	ENSMSIG00000024264 #8	Luc7l (ENSMSIG00000024237) #7	Fam234a (ENSMSIG00000024174)	Rgs11 (ENSMSIG00000023974)	Pdia2 (ENSMSIG00000023925)	Arhgdig (ENSMSIG00000023904)	Axin1 (ENSMSIG00000023878)
spretus	MODERN SPECIES	8	MGP_SPRETEiJ_G0022214	MGP_SPRETEiJ_G0022213	Grm4 (MGP_SPRETEiJ_G0022212)	Lemd2 (MGP_SPRETEiJ_G0022211)	Ip6k3 (MGP_SPRETEiJ_G0022210)	Uqcc2 (MGP_SPRETEiJ_G0022209)	Itpr3 (MGP_SPRETEiJ_G0022208)	Bak1 (MGP_SPRETEiJ_G0022207)	Ggnbp1 (MGP_SPRETEiJ_G0022206)	Zbtb9 (MGP_SPRETEiJ_G0022205)	Syngap1 (MGP_SPRETEiJ_G0022204)	Cuta (MGP_SPRETEiJ_G0022203)	Phf1 (MGP_SPRETEiJ_G0022202)	MGP_SPRETEiJ_G0022201	MGP_SPRETEiJ_G0022200	Nkx2-5 (MGP_SPRETEiJ_G0022199) #22	Bnip1 (MGP_SPRETEiJ_G0022198) #23	Crebrf (MGP_SPRETEiJ_G0022197) #24	MGP_SPRETEiJ_G0022196 #25	Ergic1 (MGP_SPRETEiJ_G0022195) #26	Dusp1 (MGP_SPRETEiJ_G0022194) #28	Neurl1b (MGP_SPRETEiJ_G0022193) #29	MGP_SPRETEiJ_G0022192 #8	MGP_SPRETEiJ_G0022191 #8	Luc7l (MGP_SPRETEiJ_G0022190) #7	Fam234a (MGP_SPRETEiJ_G0022189)	Rgs11 (MGP_SPRETEiJ_G0022188)	Arhgdig (MGP_SPRETEiJ_G0022187)	Pdia2 (MGP_SPRETEiJ_G0022186)	Axin1 (MGP_SPRETEiJ_G0022185)	Mrpl28 (MGP_SPRETEiJ_G0022184)
Mouse	MODERN SPECIES	8	Nudt3 (ENSMUSG00000024213)	Smim29 (ENSMUSG00000062753)	Hmga1 (ENSMUSG00000046711)	Grm4 (ENSMUSG00000063239)	Lemd2 (ENSMUSG00000044857)	Ip6k3 (ENSMUSG00000024210)	Uqcc2 (ENSMUSG00000024208)	Itpr3 (ENSMUSG00000042644)	Bak1 (ENSMUSG00000057789)	Ggnbp1 (ENSMUSG00000048731)	Zbtb9 (ENSMUSG00000079605)	Syngap1 (ENSMUSG00000067629)	Cuta (ENSMUSG00000024194)	Phf1 (ENSMUSG00000024193)	Kifc5b (ENSMUSG00000024301)	Nkx2-5 (ENSMUSG00000015579) #22	Bnip1 (ENSMUSG00000024191) #23	Crebrf (ENSMUSG00000048249) #24	Atp6v0e (ENSMUSG00000015575) #25	Ergic1 (ENSMUSG00000001576) #26	Dusp1 (ENSMUSG00000024190) #28	Neurl1b (ENSMUSG00000034413) #29	Luc7l (ENSMUSG00000024188) #7	Fam234a (ENSMUSG00000024187)	Rgs11 (ENSMUSG00000024186)	Arhgdig (ENSMUSG00000073433)	Pdia2 (ENSMUSG00000024184)	Axin1 (ENSMUSG00000024182)	Mrpl28 (ENSMUSG00000024181)	Pgap6 (ENSMUSG00000024180)	Nme4 (ENSMUSG00000024177)
Ryukyu mouse	MODERN SPECIES	8	Smim29 (MGP_CAROLIEiJ_G0021302)	MGP_CAROLIEiJ_G0021301	MGP_CAROLIEiJ_G0021300	Grm4 (MGP_CAROLIEiJ_G0021299)	Lemd2 (MGP_CAROLIEiJ_G0021298)	Ip6k3 (MGP_CAROLIEiJ_G0021297)	Uqcc2 (MGP_CAROLIEiJ_G0021296)	Itpr3 (MGP_CAROLIEiJ_G0021295)	Bak1 (MGP_CAROLIEiJ_G0021294)	Ggnbp1 (MGP_CAROLIEiJ_G0021293)	Zbtb9 (MGP_CAROLIEiJ_G0021292)	Syngap1 (MGP_CAROLIEiJ_G0021291)	Cuta (MGP_CAROLIEiJ_G0021290)	Phf1 (MGP_CAROLIEiJ_G0021289)	MGP_CAROLIEiJ_G0021287	Nkx2-5 (MGP_CAROLIEiJ_G0021286) #22	Bnip1 (MGP_CAROLIEiJ_G0021285) #23	Crebrf (MGP_CAROLIEiJ_G0021284) #24	MGP_CAROLIEiJ_G0021283 #25	Ergic1 (MGP_CAROLIEiJ_G0021282) #26	Dusp1 (MGP_CAROLIEiJ_G0021281) #28	Neurl1b (MGP_CAROLIEiJ_G0021280) #29	Luc7l (MGP_CAROLIEiJ_G0021279) #7	Fam234a (MGP_CAROLIEiJ_G0021278)	Rgs11 (MGP_CAROLIEiJ_G0021277)	Arhgdig (MGP_CAROLIEiJ_G0021276)	Pdia2 (MGP_CAROLIEiJ_G0021275)	Axin1 (MGP_CAROLIEiJ_G0021274)	Mrpl28 (MGP_CAROLIEiJ_G0021273)	Pgap6 (MGP_CAROLIEiJ_G0021272)	Nme4 (MGP_CAROLIEiJ_G0021271)
Shrew mouse	MODERN SPECIES	13	MGP_PahariEiJ_G0023619	MGP_PahariEiJ_G0023618	Grm4 (MGP_PahariEiJ_G0023617)	Lemd2 (MGP_PahariEiJ_G0023616)	Ip6k3 (MGP_PahariEiJ_G0023615)	Uqcc2 (MGP_PahariEiJ_G0023614)	Itpr3 (MGP_PahariEiJ_G0023613)	Bak1 (MGP_PahariEiJ_G0023612)	Ggnbp1 (MGP_PahariEiJ_G0023611)	Zbtb9 (MGP_PahariEiJ_G0023610)	Syngap1 (MGP_PahariEiJ_G0023609)	Cuta (MGP_PahariEiJ_G0023608)	Phf1 (MGP_PahariEiJ_G0023607)	MGP_PahariEiJ_G0023605	MGP_PahariEiJ_G0023606	Nkx2-5 (MGP_PahariEiJ_G0023604) #22	Bnip1 (MGP_PahariEiJ_G0023603) #23	Crebrf (MGP_PahariEiJ_G0023602) #24	MGP_PahariEiJ_G0023601 #25	Ergic1 (MGP_PahariEiJ_G0023600) #26	Dusp1 (MGP_PahariEiJ_G0023599) #28	Neurl1b (MGP_PahariEiJ_G0023598) #29	Luc7l (MGP_PahariEiJ_G0023597) #7	MGP_PahariEiJ_G0023596	Rgs11 (MGP_PahariEiJ_G0023595)	Arhgdig (MGP_PahariEiJ_G0023594)	Pdia2 (MGP_PahariEiJ_G0023593)	Axin1 (MGP_PahariEiJ_G0023592)	Mrpl28 (MGP_PahariEiJ_G0023591)	Pgap6 (MGP_PahariEiJ_G0023590)	Nme4 (MGP_PahariEiJ_G0023589)
Rat	MODERN SPECIES	1	Luc7l (ENSRNOG00000020488) #7	Hba-a1 (ENSRNOG00000029886) #8	ENSRNOG00000070249 #9	Hba-a3 (ENSRNOG00000047321) #8	Hbz (ENSRNOG00000020536) #11	Nprl3 (ENSRNOG00000020541) #12	Mpg (ENSRNOG00000020571) #13	Rhbdf1 (ENSRNOG00000020594) #14	Snrnp25 (ENSRNOG00000020626) #15	Il9r (ENSRNOG00000020630) #16	Nsg2 (ENSRNOG00000020644) #17	RGD1311343 (ENSRNOG00000027852) #18	Cpeb4 (ENSRNOG00000033169) #19	Bod1 (ENSRNOG00000020717) #20	Stc2 (ENSRNOG00000020729) #21	Nkx2-5 (ENSRNOG00000020747) #22	Bnip1 (ENSRNOG00000020753) #23	Crebrf (ENSRNOG00000020769) #24	Atp6v0e1 (ENSRNOG00000003269) #25	Ergic1 (ENSRNOG00000003508) #26	ENSRNOG00000069024 #28	Neurl1b (ENSRNOG00000027606) #29	Sh3pxd2b (ENSRNOG00000004063) #30	Ubtd2 (ENSRNOG00000004137) #31	Efcab9 (ENSRNOG00000004142) #32	Stk10 (ENSRNOG00000004217) #33	ENSRNOG00000066039	Fbxw11 (ENSRNOG00000004395) #34	Smim23 (ENSRNOG00000027196) #35	Fgf18 (ENSRNOG00000048389) #37	Npm1 (ENSRNOG00000004616)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1546	ENSNGAG00000015715 #9	ENSNGAG00000014020 #8	Hba-x (ENSNGAG00000013746) #11	Nprl3 (ENSNGAG00000003135) #12	Mpg (ENSNGAG00000020949) #13	Rhbdf1 (ENSNGAG00000017730) #14	Snrnp25 (ENSNGAG00000016910) #15	Polr3k (ENSNGAG00000016438)	Il9r (ENSNGAG00000020208) #16	Nsg2 (ENSNGAG00000013688) #17	4930524B15Rik (ENSNGAG00000012324) #18	Cpeb4 (ENSNGAG00000010735) #19	Bod1 (ENSNGAG00000006127) #20	ENSNGAG00000003484	Stc2 (ENSNGAG00000016574) #21	Nkx2-5 (ENSNGAG00000016164) #22	Bnip1 (ENSNGAG00000019475) #23	ENSNGAG00000009349 #24	ENSNGAG00000003294 #25	ENSNGAG00000002828	Ergic1 (ENSNGAG00000020608) #26	Dusp1 (ENSNGAG00000019520) #28	Neurl1b (ENSNGAG00000018472) #29	Sh3pxd2b (ENSNGAG00000000827) #30	Ubtd2 (ENSNGAG00000000104) #31	Efcab9 (ENSNGAG00000019506) #32	Stk10 (ENSNGAG00000019942) #33	Fbxw11 (ENSNGAG00000006880) #34	Smim23 (ENSNGAG00000001372) #35	Fgf18 (ENSNGAG00000001054) #37	ENSNGAG00000016679
Lesser Egyptian jerboa	MODERN SPECIES	116	Tlx3 (ENSJJAG00000010676)	ENSJJAG00000014455	Fgf18 (ENSJJAG00000016780) #37	Smim23 (ENSJJAG00000017456) #35	ENSJJAG00000021804 #34	Stk10 (ENSJJAG00000023041) #33	Efcab9 (ENSJJAG00000009458) #32	Ubtd2 (ENSJJAG00000010668) #31	Sh3pxd2b (ENSJJAG00000013982) #30	Neurl1b (ENSJJAG00000016269) #29	Msx2 (ENSJJAG00000016806)	Nsg2 (ENSJJAG00000020822) #17	Cpeb4 (ENSJJAG00000021518) #19	Bod1 (ENSJJAG00000007832) #20	Stc2 (ENSJJAG00000012335) #21	Nkx2-5 (ENSJJAG00000015156) #22	ENSJJAG00000016444 #23	ENSJJAG00000016719 #24	ENSJJAG00000017400 #24	ENSJJAG00000017961 #25	Ergic1 (ENSJJAG00000006842) #26	Dusp1 (ENSJJAG00000010442) #28	Drd1 (ENSJJAG00000014282)	ENSJJAG00000011748	Hrh2 (ENSJJAG00000021498)	Cplx2 (ENSJJAG00000010083)	Thoc3 (ENSJJAG00000010704)	ENSJJAG00000013691	4833439L19Rik (ENSJJAG00000012444)	ENSJJAG00000010486	Arl10 (ENSJJAG00000015006)
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b
Hystricomorpha	ANCESTRAL SPECIES	30	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b.e	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b
Naked mole-rat female	MODERN SPECIES	23	THOC3 (ENSHGLG00000008773)	CPLX2 (ENSHGLG00000033963)	HRH2 (ENSHGLG00000018733)	SFXN1 (ENSHGLG00000045847)	DRD1 (ENSHGLG00000016781)	ENSHGLG00000036934	ENSHGLG00000049074	MSX2 (ENSHGLG00000017569)	NSG2 (ENSHGLG00000006062) #17	ENSHGLG00000041184	ENSHGLG00000049916	C5orf47 (ENSHGLG00000040572) #18	CPEB4 (ENSHGLG00000008897) #19	ENSHGLG00000041881 #20	STC2 (ENSHGLG00000017592) #21	NKX2-5 (ENSHGLG00000017269) #22	BNIP1 (ENSHGLG00000018031) #23	ENSHGLG00000017817 #24	ENSHGLG00000021190	ENSHGLG00000018219 #25	ENSHGLG00000017100	ERGIC1 (ENSHGLG00000050911) #26	DUSP1 (ENSHGLG00000012633) #28	NEURL1B (ENSHGLG00000039883) #29	SH3PXD2B (ENSHGLG00000009542) #30	UBTD2 (ENSHGLG00000044520) #31	EFCAB9 (ENSHGLG00000006358) #32	STK10 (ENSHGLG00000007426) #33	ENSHGLG00000048340	FBXW11 (ENSHGLG00000010874) #34	ENSHGLG00000032517
Hystricomorpha_a	ANCESTRAL SPECIES	28	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b.e	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b
Hystricomorpha_b	ANCESTRAL SPECIES	19	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b.e	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b
Long-tailed chinchilla	MODERN SPECIES	115	ARL10 (ENSCLAG00000015048)	KIAA1191 (ENSCLAG00000013315)	ENSCLAG00000013733	ENSCLAG00000014990	THOC3 (ENSCLAG00000015924)	CPLX2 (ENSCLAG00000013505)	HRH2 (ENSCLAG00000015189)	SFXN1 (ENSCLAG00000016110)	DRD1 (ENSCLAG00000014757)	MSX2 (ENSCLAG00000014001)	NSG2 (ENSCLAG00000014316) #17	CPEB4 (ENSCLAG00000013156) #19	ENSCLAG00000016125 #20	ENSCLAG00000014408	STC2 (ENSCLAG00000013045) #21	NKX2-5 (ENSCLAG00000013992) #22	BNIP1 (ENSCLAG00000015919) #23	CREBRF (ENSCLAG00000014588) #24	ATP6V0E1 (ENSCLAG00000014664) #25	RPL26L1 (ENSCLAG00000014524)	ERGIC1 (ENSCLAG00000014304) #26	DUSP1 (ENSCLAG00000013473) #28	NEURL1B (ENSCLAG00000014210) #29	SH3PXD2B (ENSCLAG00000015389) #30	UBTD2 (ENSCLAG00000015134) #31	EFCAB9 (ENSCLAG00000013040) #32	STK10 (ENSCLAG00000015147) #33	FBXW11 (ENSCLAG00000013691) #34	SMIM23 (ENSCLAG00000012177) #35	FGF18 (ENSCLAG00000013051) #37	ENSCLAG00000014392
Degu	MODERN SPECIES	253									MSX2 (ENSODEG00000001847)	NSG2 (ENSODEG00000001862) #17	CPEB4 (ENSODEG00000001934) #19	ENSODEG00000001973 #20	ENSODEG00000002042	ENSODEG00000018739	STC2 (ENSODEG00000002102) #21	NKX2-5 (ENSODEG00000002184) #22	BNIP1 (ENSODEG00000002196) #23	CREBRF (ENSODEG00000002364) #24	ATP6V0E1 (ENSODEG00000001083) #25	ERGIC1 (ENSODEG00000001101) #26	DUSP1 (ENSODEG00000001126) #28	NEURL1B (ENSODEG00000001134) #29	ENSODEG00000001166	SH3PXD2B (ENSODEG00000001294) #30	UBTD2 (ENSODEG00000001390) #31	EFCAB9 (ENSODEG00000001416) #32	STK10 (ENSODEG00000001477) #33	FBXW11 (ENSODEG00000001754) #34	SMIM23 (ENSODEG00000001818) #35
Guinea pig	MODERN SPECIES	17	ENSCPOG00000034924	NOP16 (ENSCPOG00000026072)	ARL10 (ENSCPOG00000001642)	KIAA1191 (ENSCPOG00000039242)	ENSCPOG00000023337	THOC3 (ENSCPOG00000025805)	CPLX2 (ENSCPOG00000033149)	HRH2 (ENSCPOG00000003473)	SFXN1 (ENSCPOG00000010321)	DRD1 (ENSCPOG00000039492)	MSX2 (ENSCPOG00000038944)	NSG2 (ENSCPOG00000037038) #17	CPEB4 (ENSCPOG00000015530) #19	ENSCPOG00000026033 #20	STC2 (ENSCPOG00000034039) #21	NKX2-5 (ENSCPOG00000026347) #22	BNIP1 (ENSCPOG00000006752) #23	CREBRF (ENSCPOG00000014384) #24	ATP6V0E1 (ENSCPOG00000040227) #25	RPL26L1 (ENSCPOG00000012188)	ERGIC1 (ENSCPOG00000012183) #26	DUSP1 (ENSCPOG00000013344) #28	NEURL1B (ENSCPOG00000040777) #29	SH3PXD2B (ENSCPOG00000039072) #30	UBTD2 (ENSCPOG00000034425) #31	EFCAB9 (ENSCPOG00000026758) #32	STK10 (ENSCPOG00000006502) #33	FBXW11 (ENSCPOG00000009582) #34	SMIM23 (ENSCPOG00000006672) #35	FGF18 (ENSCPOG00000006088) #37	TLX3 (ENSCPOG00000024190)
Sciuridae	ANCESTRAL SPECIES	33	ENSGT01090000260018.C.a	ENSGT00940000162246	ENSGT00570000079564	ENSGT00390000018500.a	ENSGT01100000263521.a.a.b.a.b.b	ENSGT00940000161175	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b.b.a
Marmotini	ANCESTRAL SPECIES	38	ENSGT01090000260045.C.e.a.b	ENSGT00940000162246	ENSGT01090000259995.b.b.b	ENSGT00390000018500.a	ENSGT01100000263521.a.a.b.a.b.b	ENSGT00940000161175	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b.b.a
Marmotini_b	ANCESTRAL SPECIES	127		ENSGT01090000259995.a.a.a	ENSGT00390000010671	ENSGT00390000018500.a	ENSGT01100000263521.a.a.b.a.b.b	ENSGT00940000161175	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b.b.a
Squirrel	MODERN SPECIES	209	ENSSTOG00000025133	ENSSTOG00000027395	ENSSTOG00000034328	ENSSTOG00000026307	SH3BP5L (ENSSTOG00000022558)	ENSSTOG00000027630	ZNF692 (ENSSTOG00000023210)	HRH2 (ENSSTOG00000007422)	SFXN1 (ENSSTOG00000028251)	DRD1 (ENSSTOG00000029229)	MSX2 (ENSSTOG00000000399)	NSG2 (ENSSTOG00000011148) #17	CPEB4 (ENSSTOG00000020645) #19	ENSSTOG00000030887 #20	STC2 (ENSSTOG00000004413) #21	NKX2-5 (ENSSTOG00000004407) #22	BNIP1 (ENSSTOG00000004393) #23	CREBRF (ENSSTOG00000004368) #24	ATP6V0E1 (ENSSTOG00000025255) #25	RPL26L1 (ENSSTOG00000026876)	ERGIC1 (ENSSTOG00000025246) #26	DUSP1 (ENSSTOG00000023698) #28	NEURL1B (ENSSTOG00000025420) #29	SH3PXD2B (ENSSTOG00000028124) #30	UBTD2 (ENSSTOG00000014298) #31	EFCAB9 (ENSSTOG00000020218) #32	STK10 (ENSSTOG00000026208) #33	FBXW11 (ENSSTOG00000023506) #34	SMIM23 (ENSSTOG00000024706) #35	FGF18 (ENSSTOG00000023666) #37	ENSSTOG00000014732
Arctic ground squirrel	MODERN SPECIES	242															STC2 (ENSUPAG00010022254) #21	NKX2-5 (ENSUPAG00010022252) #22	BNIP1 (ENSUPAG00010022250) #23	CREBRF (ENSUPAG00010022247) #24	ATP6V0E1 (ENSUPAG00010022244) #25	RPL26L1 (ENSUPAG00010022239)	ERGIC1 (ENSUPAG00010022238) #26	NEURL1B (ENSUPAG00010022219) #29	SH3PXD2B (ENSUPAG00010022216) #30	UBTD2 (ENSUPAG00010022213) #31	EFCAB9 (ENSUPAG00010022210) #32	STK10 (ENSUPAG00010022207) #33	ENSUPAG00010022184 #34	SMIM23 (ENSUPAG00010022182) #35	FGF18 (ENSUPAG00010022179) #37	NPM1 (ENSUPAG00010022177)	TLX3 (ENSUPAG00010022175)
Alpin marmot	MODERN SPECIES	31	ENSMMMG00000009757	ENSMMMG00000009765	ENSMMMG00000009785	OR2AJ1 (ENSMMMG00000009826)	SH3BP5L (ENSMMMG00000009857)	ENSMMMG00000009866	ZNF692 (ENSMMMG00000009869)	HRH2 (ENSMMMG00000009886)	SFXN1 (ENSMMMG00000009889)	DRD1 (ENSMMMG00000009915)	MSX2 (ENSMMMG00000009968)	NSG2 (ENSMMMG00000009989) #17	CPEB4 (ENSMMMG00000010044) #19	ENSMMMG00000010091 #20	STC2 (ENSMMMG00000010105) #21	NKX2-5 (ENSMMMG00000010122) #22	BNIP1 (ENSMMMG00000010131) #23	CREBRF (ENSMMMG00000010165) #24	RPL26L1 (ENSMMMG00000010196)	ERGIC1 (ENSMMMG00000010202) #26	ENSMMMG00000010217 #28	NEURL1B (ENSMMMG00000010222) #29	SH3PXD2B (ENSMMMG00000010235) #30	UBTD2 (ENSMMMG00000010264) #31	ENSMMMG00000010272 #32	STK10 (ENSMMMG00000010286) #33	FBXW11 (ENSMMMG00000010309) #34	SMIM23 (ENSMMMG00000010399) #35	ENSMMMG00000010418 #37	ENSMMMG00000010435	TLX3 (ENSMMMG00000010459)
Eurasian red squirrel	MODERN SPECIES	15	ENSSVLG00005011447	ENSSVLG00005011500	LYPD8 (ENSSVLG00005011575)	SH3BP5L (ENSSVLG00005011666)	ZNF672 (ENSSVLG00005011715)	ZNF692 (ENSSVLG00005011774)	HRH2 (ENSSVLG00005011848)	ENSSVLG00005011926	DRD1 (ENSSVLG00005012085)	MSX2 (ENSSVLG00005012101)	NSG2 (ENSSVLG00005012146) #17	C5orf47 (ENSSVLG00005012218) #18	CPEB4 (ENSSVLG00005012332) #19	ENSSVLG00005012611 #20	STC2 (ENSSVLG00005012797) #21	NKX2-5 (ENSSVLG00005012867) #22	BNIP1 (ENSSVLG00005012932) #23	CREBRF (ENSSVLG00005013005) #24	ATP6V0E1 (ENSSVLG00005013162) #25	RPL26L1 (ENSSVLG00005013228)	ERGIC1 (ENSSVLG00005013430) #26	DUSP1 (ENSSVLG00005013587) #28	NEURL1B (ENSSVLG00005013785) #29	SH3PXD2B (ENSSVLG00005013894) #30	UBTD2 (ENSSVLG00005013934) #31	EFCAB9 (ENSSVLG00005013993) #32	STK10 (ENSSVLG00005014068) #33	FBXW11 (ENSSVLG00005014207) #34	FGF18 (ENSSVLG00005014519) #37	ENSSVLG00005014590	TLX3 (ENSSVLG00005014955)
Lagomorpha	ANCESTRAL SPECIES	32	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.a.b.d	ENSGT00940000153052.c.b.a.a.b.c.a
Rabbit	MODERN SPECIES	14	ENSOCUG00000032806	NOP16 (ENSOCUG00000013171)	ENSOCUG00000016961	KIAA1191 (ENSOCUG00000012191)	SIMC1 (ENSOCUG00000012178)	THOC3 (ENSOCUG00000016387)	CPLX2 (ENSOCUG00000025615)	HRH2 (ENSOCUG00000011627)	SFXN1 (ENSOCUG00000004827)	DRD1 (ENSOCUG00000004825)	MSX2 (ENSOCUG00000009161)	NSG2 (ENSOCUG00000038430) #17	CPEB4 (ENSOCUG00000008971) #19	ENSOCUG00000014283 #20	STC2 (ENSOCUG00000007985) #21	NKX2-5 (ENSOCUG00000000041) #22	BNIP1 (ENSOCUG00000000040) #23	CREBRF (ENSOCUG00000000038) #24	ATP6V0E1 (ENSOCUG00000006174) #25	RPL26L1 (ENSOCUG00000006172)	ERGIC1 (ENSOCUG00000029231) #26	DUSP1 (ENSOCUG00000007999) #28	NEURL1B (ENSOCUG00000027790) #29	SH3PXD2B (ENSOCUG00000006784) #30	ENSOCUG00000034187	UBTD2 (ENSOCUG00000005108) #31	EFCAB9 (ENSOCUG00000024250) #32	STK10 (ENSOCUG00000005098) #33	FBXW11 (ENSOCUG00000007739) #34	FGF18 (ENSOCUG00000011124) #37	ENSOCUG00000011117
Pika	MODERN SPECIES	4718																ENSOPRG00000000689 #22	BNIP1 (ENSOPRG00000000684) #23	CREBRF (ENSOPRG00000000677) #24	ATP6V0E1 (ENSOPRG00000000673) #25	ERGIC1 (ENSOPRG00000000665) #26	DUSP1 (ENSOPRG00000000658) #28	NEURL1B (ENSOPRG00000019143) #29
Primates	ANCESTRAL SPECIES	8	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00900000143489	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b
Lemuriformes	ANCESTRAL SPECIES	70										ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.a.a.a
Lemuriformes_a	ANCESTRAL SPECIES	146												ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.a.a.a
Coquerels sifaka	MODERN SPECIES	428											SPINK13 (ENSPCOG00000018652)	NSG2 (ENSPCOG00000019558) #17	CPEB4 (ENSPCOG00000004676) #19	ENSPCOG00000017551 #20	STC2 (ENSPCOG00000016688) #21	NKX2-5 (ENSPCOG00000019525) #22	BNIP1 (ENSPCOG00000018899) #23	CREBRF (ENSPCOG00000024235) #24	ATP6V0E1 (ENSPCOG00000022516) #25	RPL26L1 (ENSPCOG00000016409)	ERGIC1 (ENSPCOG00000014528) #26	DUSP1 (ENSPCOG00000025861) #28	NEURL1B (ENSPCOG00000025987) #29	SH3PXD2B (ENSPCOG00000021760) #30	ENSPCOG00000023430	UBTD2 (ENSPCOG00000014867) #31	EFCAB9 (ENSPCOG00000015386) #32	STK10 (ENSPCOG00000019111) #33	FBXW11 (ENSPCOG00000017113) #34	SMIM23 (ENSPCOG00000018006) #35	FGF18 (ENSPCOG00000028662) #37
Greater bamboo lemur	MODERN SPECIES	462															STC2 (ENSPSMG00000016298) #21	NKX2-5 (ENSPSMG00000016306) #22	BNIP1 (ENSPSMG00000016333) #23	CREBRF (ENSPSMG00000016349) #24	ENSPSMG00000016373 #25	RPL26L1 (ENSPSMG00000016402)	ERGIC1 (ENSPSMG00000016469) #26
Mouse lemur	MODERN SPECIES	15	CAND2 (ENSMICG00000041434)	ENSMICG00000034607	EFCAB12 (ENSMICG00000008010)	MBD4 (ENSMICG00000008022)	IFT122 (ENSMICG00000008033)	RHO (ENSMICG00000047910)	H1-8 (ENSMICG00000030377)	PLXND1 (ENSMICG00000008079)	ENSMICG00000028823	MSX2 (ENSMICG00000026941)	NSG2 (ENSMICG00000035993) #17	C5orf47 (ENSMICG00000047468) #18	CPEB4 (ENSMICG00000029322) #19	ENSMICG00000035035 #20	STC2 (ENSMICG00000032988) #21	NKX2-5 (ENSMICG00000017468) #22	ENSMICG00000009130	ENSMICG00000017726 #23	CREBRF (ENSMICG00000030817) #24	ATP6V0E1 (ENSMICG00000011317) #25	RPL26L1 (ENSMICG00000002762)	ERGIC1 (ENSMICG00000011306) #26	DUSP1 (ENSMICG00000031119) #28	NEURL1B (ENSMICG00000037429) #29	MAT2B (ENSMICG00000005155)	HMMR (ENSMICG00000005137)	ENSMICG00000029214	CCNG1 (ENSMICG00000030112)	GABRG2 (ENSMICG00000012558)	GABRA1 (ENSMICG00000029169)	GABRA6 (ENSMICG00000015140)
Bushbaby	MODERN SPECIES	118	NOP16 (ENSOGAG00000000824)	ARL10 (ENSOGAG00000000826)	ENSOGAG00000008281	SIMC1 (ENSOGAG00000008279)	THOC3 (ENSOGAG00000003503)	ENSOGAG00000026269	CPLX2 (ENSOGAG00000029483)	HRH2 (ENSOGAG00000030497)	SFXN1 (ENSOGAG00000016576)	DRD1 (ENSOGAG00000000909)	MSX2 (ENSOGAG00000032139)	NSG2 (ENSOGAG00000010238) #17	CPEB4 (ENSOGAG00000004243) #19	ENSOGAG00000001107 #20	STC2 (ENSOGAG00000007539) #21	NKX2-5 (ENSOGAG00000030259) #22	BNIP1 (ENSOGAG00000007537) #23	ENSOGAG00000030210 #24	ATP6V0E1 (ENSOGAG00000017071) #25	ENSOGAG00000032228	ERGIC1 (ENSOGAG00000017066) #26	DUSP1 (ENSOGAG00000017064) #28	NEURL1B (ENSOGAG00000026783) #29	SH3PXD2B (ENSOGAG00000012721) #30	UBTD2 (ENSOGAG00000011997) #31	EFCAB9 (ENSOGAG00000033621) #32	STK10 (ENSOGAG00000011991) #33	FBXW11 (ENSOGAG00000011988) #34	SMIM23 (ENSOGAG00000025446) #35	ENSOGAG00000028434	FGF18 (ENSOGAG00000013617) #37
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00900000143489	ENSGT00940000163300	ENSGT00390000014165.c.a.a.h.g	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537.f	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00900000143489	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00390000000537.f.a	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00910000146891	ENSGT00940000159824.c	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00900000143489	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00910000148172	ENSGT00940000156818 #33	ENSGT00940000155898.c #34	ENSGT00390000017300 #35
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00390000000537.f.a	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00910000146891	ENSGT00940000159824.c	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00900000143489	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00910000148172	ENSGT00940000156818 #33	ENSGT00940000155898.c #34	ENSGT00390000017300 #35
Hominidae	ANCESTRAL SPECIES	7	ENSGT00390000000537.f.a	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00910000146891	ENSGT00940000159824.c	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000017004.a.b.m.a.b	ENSGT00390000014165.c.b	ENSGT00900000143489	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000155445.e.a.a	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00910000148172	ENSGT00940000156818 #33
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00940000160017	ENSGT00390000000537.f.a	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00910000146891	ENSGT00940000159824.c	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000017004.a.b.m.a.b	ENSGT00390000014165.c.b	ENSGT00900000143489	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000155445.e.a.a	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00910000148172	ENSGT00940000156818 #33
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00940000160017	ENSGT00390000000537.f.a	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00910000146891	ENSGT00940000159824.c	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000017004.a.b.m.a.b	ENSGT00390000014165.c.b	ENSGT00900000143489	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000155445.e.a.a	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00910000148172	ENSGT00940000156818 #33
Pan	ANCESTRAL SPECIES	10	ENSGT00940000153451.a.a.b	ENSGT00390000000360.q.b	ENSGT00940000166141	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00910000146891	ENSGT00940000159824.c	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000017004.a.b.m.a.b	ENSGT00390000014165.c.b	ENSGT00900000143489	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000155445.e.a.a	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00910000148172	ENSGT00940000156818 #33
Bonobo	MODERN SPECIES	18	KIAA1191 (ENSPPAG00000024759)	ENSPPAG00000018818	SIMC1 (ENSPPAG00000042073)	THOC3 (ENSPPAG00000006020)	CPLX2 (ENSPPAG00000038071)	HRH2 (ENSPPAG00000033874)	SFXN1 (ENSPPAG00000036199)	DRD1 (ENSPPAG00000015231)	ENSPPAG00000030791	MSX2 (ENSPPAG00000012688)	NSG2 (ENSPPAG00000028721) #17	C5orf47 (ENSPPAG00000018189) #18	CPEB4 (ENSPPAG00000030599) #19	BOD1 (ENSPPAG00000033401) #20	STC2 (ENSPPAG00000042436) #21	NKX2-5 (ENSPPAG00000031047) #22	BNIP1 (ENSPPAG00000029895) #23	CREBRF (ENSPPAG00000039864) #24	ATP6V0E1 (ENSPPAG00000037191) #25	ENSPPAG00000043282	RPL26L1 (ENSPPAG00000029664)	ENSPPAG00000036347	ERGIC1 (ENSPPAG00000030828) #26	DUSP1 (ENSPPAG00000028299) #28	ENSPPAG00000030109	ENSPPAG00000014966 #29	SH3PXD2B (ENSPPAG00000028491) #30	UBTD2 (ENSPPAG00000040436) #31	EFCAB9 (ENSPPAG00000037845) #32	ENSPPAG00000041942	STK10 (ENSPPAG00000017062) #33
Chimpanzee	MODERN SPECIES	18	ENSPTRG00000046052	SIMC1 (ENSPTRG00000017557)	ENSPTRG00000017556	THOC3 (ENSPTRG00000017594)	CPLX2 (ENSPTRG00000048326)	HRH2 (ENSPTRG00000017551)	SFXN1 (ENSPTRG00000017550)	DRD1 (ENSPTRG00000049206)	ENSPTRG00000048982	MSX2 (ENSPTRG00000017548)	NSG2 (ENSPTRG00000017547) #17	C5H5orf47 (ENSPTRG00000017546) #18	CPEB4 (ENSPTRG00000017545) #19	BOD1 (ENSPTRG00000017544) #20	STC2 (ENSPTRG00000017543) #21	NKX2-5 (ENSPTRG00000017542) #22	BNIP1 (ENSPTRG00000017541) #23	CREBRF (ENSPTRG00000017540) #24	ATP6V0E1 (ENSPTRG00000017538) #25	ENSPTRG00000041040	RPL26L1 (ENSPTRG00000043990)	ENSPTRG00000046007	ERGIC1 (ENSPTRG00000017535) #26	DUSP1 (ENSPTRG00000017534) #28	ENSPTRG00000046003	NEURL1B (ENSPTRG00000033712) #29	SH3PXD2B (ENSPTRG00000017531) #30	UBTD2 (ENSPTRG00000044878) #31	EFCAB9 (ENSPTRG00000034173) #32	ENSPTRG00000050304	STK10 (ENSPTRG00000017527) #33
Human	MODERN SPECIES	17	NOP16 (ENSG00000048162)	ARL10 (ENSG00000175414)	KIAA1191 (ENSG00000122203)	SIMC1 (ENSG00000170085)	THOC3 (ENSG00000051596)	CPLX2 (ENSG00000145920)	HRH2 (ENSG00000113749)	SFXN1 (ENSG00000164466)	DRD1 (ENSG00000184845)	MSX2 (ENSG00000120149)	NSG2 (ENSG00000170091) #17	C5orf47 (ENSG00000185056) #18	CPEB4 (ENSG00000113742) #19	BOD1 (ENSG00000145919) #20	STC2 (ENSG00000113739) #21	NKX2-5 (ENSG00000183072) #22	BNIP1 (ENSG00000113734) #23	CREBRF (ENSG00000164463) #24	ATP6V0E1 (ENSG00000113732) #25	RPL26L1 (ENSG00000037241)	ERGIC1 (ENSG00000113719) #26	DUSP1 (ENSG00000120129) #28	NEURL1B (ENSG00000214357) #29	SH3PXD2B (ENSG00000174705) #30	UBTD2 (ENSG00000168246) #31	EFCAB9 (ENSG00000214360) #32	STK10 (ENSG00000072786) #33	FBXW11 (ENSG00000072803) #34	SMIM23 (ENSG00000185662) #35	FGF18 (ENSG00000156427) #37	NPM1 (ENSG00000181163)
Gorilla	MODERN SPECIES	18	KIAA1191 (ENSGGOG00000023834)	ENSGGOG00000027093	SIMC1 (ENSGGOG00000005493)	ENSGGOG00000038538	CPLX2 (ENSGGOG00000039211)	HRH2 (ENSGGOG00000010675)	SFXN1 (ENSGGOG00000008195)	DRD1 (ENSGGOG00000041060)	ENSGGOG00000041720	MSX2 (ENSGGOG00000025973)	NSG2 (ENSGGOG00000012927) #17	C5orf47 (ENSGGOG00000013448) #18	CPEB4 (ENSGGOG00000010097) #19	BOD1 (ENSGGOG00000010925) #20	STC2 (ENSGGOG00000013736) #21	NKX2-5 (ENSGGOG00000017092) #22	BNIP1 (ENSGGOG00000002239) #23	CREBRF (ENSGGOG00000011220) #24	ATP6V0E1 (ENSGGOG00000006701) #25	ENSGGOG00000038246	RPL26L1 (ENSGGOG00000025582)	ENSGGOG00000044004	ERGIC1 (ENSGGOG00000008455) #26	DUSP1 (ENSGGOG00000007135) #28	ENSGGOG00000004882 #29	SH3PXD2B (ENSGGOG00000008765) #30	UBTD2 (ENSGGOG00000043610) #31	EFCAB9 (ENSGGOG00000011373) #32	STK10 (ENSGGOG00000012427) #33	FBXW11 (ENSGGOG00000007880) #34	SMIM23 (ENSGGOG00000004301) #35
Orangutan	MODERN SPECIES	18	FAM193B (ENSPPYG00000016098)	TMED9 (ENSPPYG00000033004)	B4GALT7 (ENSPPYG00000038147)	THOC3 (ENSPPYG00000016066)	CPLX2 (ENSPPYG00000016064)	HRH2 (ENSPPYG00000016150)	SFXN1 (ENSPPYG00000016063)	DRD1 (ENSPPYG00000016062)	MSX2 (ENSPPYG00000016061)	ENSPPYG00000038848	NSG2 (ENSPPYG00000016060) #17	C5orf47 (ENSPPYG00000016059) #18	ENSPPYG00000031520 #19	ENSPPYG00000016057 #20	STC2 (ENSPPYG00000031955) #21	ENSPPYG00000039258 #22	BNIP1 (ENSPPYG00000016054) #23	CREBRF (ENSPPYG00000016053) #24	ATP6V0E1 (ENSPPYG00000039284) #25	ENSPPYG00000016051	RPL26L1 (ENSPPYG00000025929)	ERGIC1 (ENSPPYG00000016049) #26	DUSP1 (ENSPPYG00000016048) #28	ENSPPYG00000016047	NEURL1B (ENSPPYG00000016046) #29	SH3PXD2B (ENSPPYG00000016044) #30	UBTD2 (ENSPPYG00000040678) #31	EFCAB9 (ENSPPYG00000016042) #32	STK10 (ENSPPYG00000016041) #33	FBXW11 (ENSPPYG00000016040) #34	SMIM23 (ENSPPYG00000016039) #35
Gibbon	MODERN SPECIES	11	KIAA1191 (ENSNLEG00000030905)	SIMC1 (ENSNLEG00000012464)	THOC3 (ENSNLEG00000000593)	CPLX2 (ENSNLEG00000000585)	HRH2 (ENSNLEG00000000579)	SFXN1 (ENSNLEG00000000555)	DRD1 (ENSNLEG00000032546)	ENSNLEG00000030116	MSX2 (ENSNLEG00000000548)	ENSNLEG00000033959	NSG2 (ENSNLEG00000000522) #17	C5orf47 (ENSNLEG00000027778) #18	CPEB4 (ENSNLEG00000000487) #19	BOD1 (ENSNLEG00000000476) #20	STC2 (ENSNLEG00000000463) #21	NKX2-5 (ENSNLEG00000000457) #22	BNIP1 (ENSNLEG00000000453) #23	ENSNLEG00000000442 #24	ENSNLEG00000030031 #25	ERGIC1 (ENSNLEG00000000407) #26	ENSNLEG00000033458	DUSP1 (ENSNLEG00000035887) #28	ENSNLEG00000000392 #29	SH3PXD2B (ENSNLEG00000000384) #30	UBTD2 (ENSNLEG00000000381) #31	EFCAB9 (ENSNLEG00000000378) #32	STK10 (ENSNLEG00000000350) #33	ENSNLEG00000031400	FBXW11 (ENSNLEG00000000338) #34	ENSNLEG00000000336 #35	ENSNLEG00000000334 #37
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00910000146891	ENSGT00940000159824.c	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a	ENSGT00910000147916	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b.j	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00910000148172	ENSGT00940000156818 #33	ENSGT00940000155898.c #34	ENSGT00390000017300 #35	ENSGT00620000089286
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00940000160017	ENSGT00390000000537.f.a	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00910000146891	ENSGT00940000159824.c	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b.j	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898.c #34	ENSGT00390000017300 #35	ENSGT00620000089286	ENSGT00940000159553 #37
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00910000146891	ENSGT00940000159824.c	ENSGT00940000154276.hb.b	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a	ENSGT00910000147916	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b.j	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898.c #34	ENSGT00390000017300 #35	ENSGT00620000089286	ENSGT00940000159553 #37
Macaca	ANCESTRAL SPECIES	7	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00910000146891	ENSGT00940000159824.c	ENSGT00940000154276.hb.b	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a	ENSGT00910000147916	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b.i.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898.c #34	ENSGT00390000017300 #35	ENSGT00620000089286	ENSGT00940000159553 #37
Pig-tailed macaque	MODERN SPECIES	566	THOC3 (ENSMNEG00000043023)	CPLX2 (ENSMNEG00000017663)	HRH2 (ENSMNEG00000039778)	SFXN1 (ENSMNEG00000043255)	DRD1 (ENSMNEG00000011662)	ENSMNEG00000040948	MSX2 (ENSMNEG00000036098)	ENSMNEG00000030903	ENSMNEG00000038634	ENSMNEG00000018921	NSG2 (ENSMNEG00000030122) #17	C5orf47 (ENSMNEG00000036162) #18	CPEB4 (ENSMNEG00000034689) #19	BOD1 (ENSMNEG00000038516) #20	STC2 (ENSMNEG00000032109) #21	NKX2-5 (ENSMNEG00000016498) #22	BNIP1 (ENSMNEG00000033003) #23	CREBRF (ENSMNEG00000032133) #24	ATP6V0E1 (ENSMNEG00000036422) #25	RPL26L1 (ENSMNEG00000029899)	ERGIC1 (ENSMNEG00000031904) #26	DUSP1 (ENSMNEG00000043275) #28	NEURL1B (ENSMNEG00000044968) #29	SH3PXD2B (ENSMNEG00000036165) #30	ENSMNEG00000035122	UBTD2 (ENSMNEG00000031278) #31	EFCAB9 (ENSMNEG00000014910) #32	STK10 (ENSMNEG00000029184) #33	FBXW11 (ENSMNEG00000033472) #34	SMIM23 (ENSMNEG00000029674) #35	ENSMNEG00000044745
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00940000166141	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00910000146891	ENSGT00940000155491.d	ENSGT00940000159824.c	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a #20	ENSGT00940000154979.s.b.b #20	ENSGT00390000005989.a #21	ENSGT01100000263493.a.b.a.b.b.b.a.a.a.a.b.a	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898.c #34	ENSGT00390000017300 #35	ENSGT00620000089286	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.a.a.b
Crab-eating macaque	MODERN SPECIES	16	ENSMFAG00000055341	THOC3 (ENSMFAG00000034476)	CPLX2 (ENSMFAG00000037899)	HRH2 (ENSMFAG00000032099)	SFXN1 (ENSMFAG00000040820)	DRD1 (ENSMFAG00000015744)	ENSMFAG00000010945	ENSMFAG00000062346	MSX2 (ENSMFAG00000056450)	ENSMFAG00000010780	NSG2 (ENSMFAG00000033258) #17	CPEB4 (ENSMFAG00000003075) #19	ENSMFAG00000003066 #20	STC2 (ENSMFAG00000048596) #21	ENSMFAG00000060111	NKX2-5 (ENSMFAG00000034569) #22	BNIP1 (ENSMFAG00000037018) #23	CREBRF (ENSMFAG00000036600) #24	ATP6V0E1 (ENSMFAG00000045429) #25	ERGIC1 (ENSMFAG00000037788) #26	DUSP1 (ENSMFAG00000044045) #28	SH3PXD2B (ENSMFAG00000040954) #30	UBTD2 (ENSMFAG00000052150) #31	EFCAB9 (ENSMFAG00000043157) #32	ENSMFAG00000051726	STK10 (ENSMFAG00000033923) #33	ENSMFAG00000057552	ENSMFAG00000047803	FBXW11 (ENSMFAG00000039918) #34	SMIM23 (ENSMFAG00000039057) #35	ENSMFAG00000039380
Rhesus	MODERN SPECIES	16	ENSMMUG00000049085	ENSMMUG00000041279	THOC3 (ENSMMUG00000018737)	HRH2 (ENSMMUG00000014245)	ENSMMUG00000052819	SFXN1 (ENSMMUG00000005148)	DRD1 (ENSMMUG00000005147)	ENSMMUG00000039572	MSX2 (ENSMMUG00000004932)	NSG2 (ENSMMUG00000059444) #17	CPEB4 (ENSMMUG00000019926) #19	BOD1 (ENSMMUG00000013793) #20	ENSMMUG00000054693	STC2 (ENSMMUG00000014782) #21	ENSMMUG00000055739	NKX2-5 (ENSMMUG00000064883) #22	BNIP1 (ENSMMUG00000014607) #23	CREBRF (ENSMMUG00000005909) #24	ATP6V0E1 (ENSMMUG00000059290) #25	ERGIC1 (ENSMMUG00000003067) #26	DUSP1 (ENSMMUG00000059336) #28	NEURL1B (ENSMMUG00000008848) #29	SH3PXD2B (ENSMMUG00000010102) #30	UBTD2 (ENSMMUG00000052139) #31	EFCAB9 (ENSMMUG00000059414) #32	ENSMMUG00000057388	STK10 (ENSMMUG00000006811) #33	FBXW11 (ENSMMUG00000016008) #34	SMIM23 (ENSMMUG00000057889) #35	FGF18 (ENSMMUG00000019401) #37	NPM1 (ENSMMUG00000015781)
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00910000146891	ENSGT00940000159824.c	ENSGT00940000154276.hb.b	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a	ENSGT00910000147916	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b.j	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898.c #34	ENSGT00390000017300 #35	ENSGT00620000089286	ENSGT00940000159553 #37
Olive baboon	MODERN SPECIES	15	ENSPANG00000038800	ENSPANG00000038898	THOC3 (ENSPANG00000012114)	CPLX2 (ENSPANG00000023733)	HRH2 (ENSPANG00000019607)	SFXN1 (ENSPANG00000023643)	DRD1 (ENSPANG00000017071)	ENSPANG00000043119	ENSPANG00000045235	MSX2 (ENSPANG00000041175)	ENSPANG00000045766	ENSPANG00000019682	CPEB4 (ENSPANG00000009300) #19	BOD1 (ENSPANG00000005513) #20	STC2 (ENSPANG00000045597) #21	NKX2-5 (ENSPANG00000012362) #22	BNIP1 (ENSPANG00000003761) #23	CREBRF (ENSPANG00000013059) #24	ENSPANG00000011468 #25	RPL26L1 (ENSPANG00000012204)	ERGIC1 (ENSPANG00000023223) #26	ENSPANG00000049887 #28	NEURL1B (ENSPANG00000001624) #29	SH3PXD2B (ENSPANG00000013857) #30	UBTD2 (ENSPANG00000002422) #31	EFCAB9 (ENSPANG00000003762) #32	STK10 (ENSPANG00000009341) #33	FBXW11 (ENSPANG00000006849) #34	SMIM23 (ENSPANG00000003366) #35	FGF18 (ENSPANG00000017661) #37	NPM1 (ENSPANG00000000217)
Cercopithecinae_d	ANCESTRAL SPECIES	53	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00910000146891	ENSGT00940000159824.c	ENSGT00940000154276.hb.b	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a	ENSGT00910000147916	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a.d #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b.j	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898.c #34	ENSGT00390000017300 #35	ENSGT00620000089286	ENSGT00940000159553 #37
Sooty mangabey	MODERN SPECIES	597	THOC3 (ENSCATG00000029038)	CPLX2 (ENSCATG00000044259)	HRH2 (ENSCATG00000045358)	SFXN1 (ENSCATG00000030378)	DRD1 (ENSCATG00000006084)	ENSCATG00000009773	MSX2 (ENSCATG00000022593)	ENSCATG00000040728	ENSCATG00000040643	ENSCATG00000011643	NSG2 (ENSCATG00000029990) #17	C5orf47 (ENSCATG00000012564) #18	CPEB4 (ENSCATG00000014550) #19	ENSCATG00000005639 #20	STC2 (ENSCATG00000030924) #21	NKX2-5 (ENSCATG00000031410) #22	BNIP1 (ENSCATG00000043162) #23	CREBRF (ENSCATG00000040516) #24	ATP6V0E1 (ENSCATG00000036579) #25	RPL26L1 (ENSCATG00000029601)	ERGIC1 (ENSCATG00000041026) #26	DUSP1 (ENSCATG00000027456) #28	NEURL1B (ENSCATG00000038257) #29	SH3PXD2B (ENSCATG00000043516) #30	UBTD2 (ENSCATG00000032931) #31	EFCAB9 (ENSCATG00000042923) #32	STK10 (ENSCATG00000036488) #33	FBXW11 (ENSCATG00000000142) #34	SMIM23 (ENSCATG00000031141) #35	ENSCATG00000040661	FGF18 (ENSCATG00000040646) #37
Drill	MODERN SPECIES	960														ENSMLEG00000030320 #20	STC2 (ENSMLEG00000026461) #21	NKX2-5 (ENSMLEG00000000339) #22	BNIP1 (ENSMLEG00000039126) #23	CREBRF (ENSMLEG00000000513) #24	ATP6V0E1 (ENSMLEG00000030149) #25	ENSMLEG00000037483	ERGIC1 (ENSMLEG00000029804) #26	ENSMLEG00000040155	DUSP1 (ENSMLEG00000039172) #28	NEURL1B (ENSMLEG00000033205) #29	SH3PXD2B (ENSMLEG00000029587) #30	UBTD2 (ENSMLEG00000038379) #31	EFCAB9 (ENSMLEG00000038052) #32	STK10 (ENSMLEG00000041182) #33	FBXW11 (ENSMLEG00000035049) #34	SMIM23 (ENSMLEG00000042760) #35	ENSMLEG00000040662
Vervet Monkey	MODERN SPECIES	15	ARL10 (ENSCSAG00000009428)	KIAA1191 (ENSCSAG00000009441)	SIMC1 (ENSCSAG00000009447)	THOC3 (ENSCSAG00000009454)	CPLX2 (ENSCSAG00000009460)	HRH2 (ENSCSAG00000009468)	SFXN1 (ENSCSAG00000009487)	DRD1 (ENSCSAG00000009491)	ENSCSAG00000019724	MSX2 (ENSCSAG00000009496)	NSG2 (ENSCSAG00000009499) #17	C5orf47 (ENSCSAG00000009504) #18	CPEB4 (ENSCSAG00000009516) #19	BOD1 (ENSCSAG00000009522) #20	STC2 (ENSCSAG00000009529) #21	NKX2-5 (ENSCSAG00000009533) #22	BNIP1 (ENSCSAG00000009541) #23	CREBRF (ENSCSAG00000009545) #24	ATP6V0E1 (ENSCSAG00000009548) #25	ENSCSAG00000009551	ERGIC1 (ENSCSAG00000009579) #26	DUSP1 (ENSCSAG00000009591) #28	NEURL1B (ENSCSAG00000009597) #29	SH3PXD2B (ENSCSAG00000009606) #30	UBTD2 (ENSCSAG00000009612) #31	EFCAB9 (ENSCSAG00000009621) #32	STK10 (ENSCSAG00000009634) #33	FBXW11 (ENSCSAG00000009643) #34	SMIM23 (ENSCSAG00000009650) #35	ENSCSAG00000009657	FGF18 (ENSCSAG00000009667) #37
Rhinopithecus	ANCESTRAL SPECIES	118								ENSGT00940000159824.c	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a	ENSGT00910000147916	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b.i.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00910000148172	ENSGT00940000156818 #33	ENSGT00940000155898.c #34	ENSGT00390000017300 #35	ENSGT00620000089286
Golden snub-nosed monkey	MODERN SPECIES	1733									MSX2 (ENSRROG00000036930)	ENSRROG00000040238	C5orf47 (ENSRROG00000008119) #18	NSG2 (ENSRROG00000032380) #17	CPEB4 (ENSRROG00000029196) #19	BOD1 (ENSRROG00000039526) #20	STC2 (ENSRROG00000030679) #21	NKX2-5 (ENSRROG00000043318) #22	BNIP1 (ENSRROG00000035092) #23	CREBRF (ENSRROG00000041689) #24	ATP6V0E1 (ENSRROG00000035355) #25	ENSRROG00000034464	ERGIC1 (ENSRROG00000031072) #26	DUSP1 (ENSRROG00000027680) #28	NEURL1B (ENSRROG00000043630) #29	SH3PXD2B (ENSRROG00000038290) #30	UBTD2 (ENSRROG00000038688) #31	EFCAB9 (ENSRROG00000001287) #32	ENSRROG00000039795	STK10 (ENSRROG00000043810) #33	FBXW11 (ENSRROG00000042640) #34	SMIM23 (ENSRROG00000037550) #35	ENSRROG00000031061
Black snub-nosed monkey	MODERN SPECIES	1977													ENSRBIG00000028275 #19	BOD1 (ENSRBIG00000027366) #20	STC2 (ENSRBIG00000042135) #21	NKX2-5 (ENSRBIG00000007305) #22	BNIP1 (ENSRBIG00000024422) #23	CREBRF (ENSRBIG00000041000) #24	ATP6V0E1 (ENSRBIG00000000223) #25	RPL26L1 (ENSRBIG00000029430)	ERGIC1 (ENSRBIG00000032953) #26	DUSP1 (ENSRBIG00000037066) #28	NEURL1B (ENSRBIG00000037294) #29	SH3PXD2B (ENSRBIG00000036914) #30	UBTD2 (ENSRBIG00000037359) #31	EFCAB9 (ENSRBIG00000031355) #32	ENSRBIG00000030762	STK10 (ENSRBIG00000037834) #33
Platyrrhini	ANCESTRAL SPECIES	19	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537.f	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a.a #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.s #25	ENSGT00390000014165.c.b	ENSGT00900000143489	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37
Cebidae	ANCESTRAL SPECIES	24	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537.f	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a.a #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.s #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b.g.b
Cebidae_a	ANCESTRAL SPECIES	19	ENSGT00940000163830.c	ENSGT00940000160017	ENSGT00390000000537.f	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979.s.a.a #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.s #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.b.b.g.b.a
Bolivian squirrel monkey	MODERN SPECIES	123	ENSSBOG00000022208	ARL10 (ENSSBOG00000031819)	KIAA1191 (ENSSBOG00000026134)	SIMC1 (ENSSBOG00000025281)	THOC3 (ENSSBOG00000022663)	CPLX2 (ENSSBOG00000031125)	HRH2 (ENSSBOG00000032885)	SFXN1 (ENSSBOG00000021468)	DRD1 (ENSSBOG00000014839)	MSX2 (ENSSBOG00000032992)	NSG2 (ENSSBOG00000028874) #17	C5orf47 (ENSSBOG00000011758) #18	CPEB4 (ENSSBOG00000002632) #19	ENSSBOG00000023774 #20	STC2 (ENSSBOG00000035805) #21	NKX2-5 (ENSSBOG00000024121) #22	BNIP1 (ENSSBOG00000029104) #23	ENSSBOG00000026680	CREBRF (ENSSBOG00000031151) #24	ATP6V0E1 (ENSSBOG00000031772) #25	RPL26L1 (ENSSBOG00000027992)	ERGIC1 (ENSSBOG00000032967) #26	DUSP1 (ENSSBOG00000027324) #28	NEURL1B (ENSSBOG00000029939) #29	SH3PXD2B (ENSSBOG00000014112) #30	UBTD2 (ENSSBOG00000013274) #31	EFCAB9 (ENSSBOG00000019620) #32	STK10 (ENSSBOG00000033405) #33	FBXW11 (ENSSBOG00000023046) #34	SMIM23 (ENSSBOG00000018130) #35	FGF18 (ENSSBOG00000024519) #37
Capuchin	MODERN SPECIES	91	VIL1 (ENSCCAG00000026608)	CTDSP1 (ENSCCAG00000035606)	SLC11A1 (ENSCCAG00000036035)	CATIP (ENSCCAG00000029357)	TMBIM1 (ENSCCAG00000037987)	PNKD (ENSCCAG00000036713)	AAMP (ENSCCAG00000016105)	ENSCCAG00000036905	MSX2 (ENSCCAG00000037478)	NSG2 (ENSCCAG00000024923) #17	ENSCCAG00000036672	C5orf47 (ENSCCAG00000038085) #18	CPEB4 (ENSCCAG00000037039) #19	ENSCCAG00000031306 #20	STC2 (ENSCCAG00000020916) #21	NKX2-5 (ENSCCAG00000030136) #22	BNIP1 (ENSCCAG00000034317) #23	ENSCCAG00000019031	ENSCCAG00000027575 #24
Marmoset	MODERN SPECIES	11	HRH2 (ENSCJAG00000005384)	SFXN1 (ENSCJAG00000005397)	ENSCJAG00000072817	DRD1 (ENSCJAG00000046402)	ENSCJAG00000084066	ENSCJAG00000022277	MSX2 (ENSCJAG00000070729)	ENSCJAG00000067799	ENSCJAG00000075851	NSG2 (ENSCJAG00000019152) #17	C5orf47 (ENSCJAG00000076312) #18	CPEB4 (ENSCJAG00000019166) #19	ENSCJAG00000031971 #20	ENSCJAG00000045816	STC2 (ENSCJAG00000054466) #21	NKX2-5 (ENSCJAG00000078127) #22	BNIP1 (ENSCJAG00000019186) #23	CREBRF (ENSCJAG00000019193) #24	ERGIC1 (ENSCJAG00000019238) #26	DUSP1 (ENSCJAG00000067622) #28	NEURL1B (ENSCJAG00000019254) #29	SH3PXD2B (ENSCJAG00000019258) #30	UBTD2 (ENSCJAG00000046779) #31	ENSCJAG00000047953	EFCAB9 (ENSCJAG00000019273) #32	ENSCJAG00000069421	ENSCJAG00000069688	STK10 (ENSCJAG00000019275) #33	ENSCJAG00000073693	FBXW11 (ENSCJAG00000019297) #34	SMIM23 (ENSCJAG00000019324) #35
Mas night monkey	MODERN SPECIES	610										MSX2 (ENSANAG00000019738)	NSG2 (ENSANAG00000026283) #17	C5orf47 (ENSANAG00000026045) #18	CPEB4 (ENSANAG00000038371) #19	BOD1 (ENSANAG00000025713) #20	STC2 (ENSANAG00000031511) #21	NKX2-5 (ENSANAG00000024360) #22	BNIP1 (ENSANAG00000033155) #23	ENSANAG00000026625	CREBRF (ENSANAG00000029119) #24	ENSANAG00000025907 #25	RPL26L1 (ENSANAG00000034277)	ENSANAG00000033316	ERGIC1 (ENSANAG00000037298) #26	DUSP1 (ENSANAG00000027062) #28	NEURL1B (ENSANAG00000038171) #29	SH3PXD2B (ENSANAG00000014072) #30	UBTD2 (ENSANAG00000033217) #31	EFCAB9 (ENSANAG00000032826) #32	STK10 (ENSANAG00000027679) #33	FBXW11 (ENSANAG00000036790) #34	ENSANAG00000024342
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00900000143489	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00900000143489	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.a #25	ENSGT00390000014165.c.b	ENSGT00900000143489	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37
Suina	ANCESTRAL SPECIES	25	ENSGT00940000155949	ENSGT00390000018319.a.b.a	ENSGT00940000155897	ENSGT00390000007246	ENSGT00390000009329.b	ENSGT00940000155498	ENSGT01100000263506.b.b	ENSGT00940000155389	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.a.a #25	ENSGT00390000014165.c.b	ENSGT00900000143489	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.a.b
Pig	MODERN SPECIES	7	MAP1B (ENSSSCG00000016974)	MRPS27 (ENSSSCG00000023818)	ENSSSCG00000046085	PTCD2 (ENSSSCG00000016975)	ZNF366 (ENSSSCG00000016976)	ENSSSCG00000016977	TNPO1 (ENSSSCG00000027293)	DRD1 (ENSSSCG00000029037)	ENSSSCG00000034025	MSX2 (ENSSSCG00000034500)	NSG2 (ENSSSCG00000016979) #17	C5orf47 (ENSSSCG00000035512) #18	CPEB4 (ENSSSCG00000016981) #19	ENSSSCG00000016982 #20	STC2 (ENSSSCG00000016983) #21	NKX2-5 (ENSSSCG00000036285) #22	BNIP1 (ENSSSCG00000016985) #23	CREBRF (ENSSSCG00000016986) #24	ENSSSCG00000016990 #25	RPL26L1 (ENSSSCG00000016989)	ENSSSCG00000035845	ERGIC1 (ENSSSCG00000016988) #26	ENSSSCG00000056851	DUSP1 (ENSSSCG00000016991) #28	NEURL1B (ENSSSCG00000016992) #29	SH3PXD2B (ENSSSCG00000027378) #30	UBTD2 (ENSSSCG00000023948) #31	EFCAB9 (ENSSSCG00000016995) #32	STK10 (ENSSSCG00000022478) #33	FBXW11 (ENSSSCG00000023307) #34	ENSSSCG00000023757
Chacoan peccary	MODERN SPECIES	97													CPEB4 (ENSCWAG00000000128) #19	ENSCWAG00000000497 #20	STC2 (ENSCWAG00000000525) #21	NKX2-5 (ENSCWAG00000000540) #22	BNIP1 (ENSCWAG00000000552) #23	CREBRF (ENSCWAG00000000582) #24	ENSCWAG00000000600 #25	RPL26L1 (ENSCWAG00000000616)	ENSCWAG00000000627	ERGIC1 (ENSCWAG00000000647) #26	DUSP1 (ENSCWAG00000000695) #28	NEURL1B (ENSCWAG00000000720) #29	SH3PXD2B (ENSCWAG00000000790) #30	UBTD2 (ENSCWAG00000000837) #31	EFCAB9 (ENSCWAG00000000850) #32	STK10 (ENSCWAG00000000878) #33	FBXW11 (ENSCWAG00000000944) #34	FGF18 (ENSCWAG00000001037) #37	NPM1 (ENSCWAG00000001072)
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.a #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b
Camelidae	ANCESTRAL SPECIES	57	ENSGT00390000003426	ENSGT00940000160017	ENSGT00940000163830	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.eb #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629
Arabian camel	MODERN SPECIES	14	ENSCDRG00005003641	NOP16 (ENSCDRG00005003667)	ARL10 (ENSCDRG00005003745)	KIAA1191 (ENSCDRG00005003792)	ENSCDRG00005003852	THOC3 (ENSCDRG00005003949)	CPLX2 (ENSCDRG00005003984)	HRH2 (ENSCDRG00005004042)	SFXN1 (ENSCDRG00005004064)	DRD1 (ENSCDRG00005004119)	MSX2 (ENSCDRG00005004133)	NSG2 (ENSCDRG00005004158) #17	CPEB4 (ENSCDRG00005004317) #19	ENSCDRG00005004889 #20	STC2 (ENSCDRG00005004904) #21	NKX2-5 (ENSCDRG00005004925) #22	BNIP1 (ENSCDRG00005004968) #23	CREBRF (ENSCDRG00005005000) #24	ENSCDRG00005005036	ENSCDRG00005005054 #25	RPL26L1 (ENSCDRG00005005086)	ERGIC1 (ENSCDRG00005005118) #26	ENSCDRG00005005259 #28	DUSP1 (ENSCDRG00005005269) #28	NEURL1B (ENSCDRG00005005289) #29	SH3PXD2B (ENSCDRG00005005308) #30	UBTD2 (ENSCDRG00005005351) #31	EFCAB9 (ENSCDRG00005005368) #32	STK10 (ENSCDRG00005005406) #33	FBXW11 (ENSCDRG00005005462) #34	FGF18 (ENSCDRG00005005676) #37
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.a #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b
Pecora	ANCESTRAL SPECIES	25	ENSGT00940000153288.b	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.a #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629
Percora_a	ANCESTRAL SPECIES	26	ENSGT00940000153288.a.a.d	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.a #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b.m	ENSGT00940000160629
Bovidae	ANCESTRAL SPECIES	26	ENSGT00510000046986.x.a.c	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a	ENSGT00550000074890	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.a #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b.m	ENSGT00940000160629
Bovinae	ANCESTRAL SPECIES	25	ENSGT00940000155831	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a.r	ENSGT00390000008107.c.a.q	ENSGT00550000074890	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159824	ENSGT00940000154911.l	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00420000029792.d	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.a #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT01000000218258	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b.m
Bos	ANCESTRAL SPECIES	26	ENSGT00940000155831	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a.r	ENSGT00390000008107.c.a.q	ENSGT00550000074890	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159824	ENSGT00940000154911.l	ENSGT00390000000483.a.a #17	ENSGT00940000168505	ENSGT00940000154998.a.a #19	ENSGT00420000029792.d	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.a #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT01000000218258	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b.m
Bos_b	ANCESTRAL SPECIES	29	ENSGT00940000155831	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a.r	ENSGT00390000008107.c.a.q	ENSGT00550000074890	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159824	ENSGT00940000154911.l	ENSGT00390000000483.a.a #17	ENSGT00940000168505	ENSGT00940000154998.a.a #19	ENSGT00420000029792.d	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.a #25	ENSGT00390000014165.d	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT01000000218258	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b.m
Cow	MODERN SPECIES	12	UTP15 (ENSBTAG00000006843)	ARHGEF28 (ENSBTAG00000005633)	ENC1 (ENSBTAG00000026369)	ENSBTAG00000034138	HEXB (ENSBTAG00000015512)	GFM2 (ENSBTAG00000015519)	NSA2 (ENSBTAG00000003066)	FAM169A (ENSBTAG00000016002)	MSX2 (ENSBTAG00000013873)	ENSBTAG00000048786	NSG2 (ENSBTAG00000000564) #17	C20H5orf47 (ENSBTAG00000054459)	CPEB4 (ENSBTAG00000009995) #19	BOD1 (ENSBTAG00000034598) #20	STC2 (ENSBTAG00000001823) #21	NKX2-5 (ENSBTAG00000020568) #22	BNIP1 (ENSBTAG00000002021) #23	CREBRF (ENSBTAG00000002020) #24	ATP6V0E1 (ENSBTAG00000015100) #25	RPL26L1 (ENSBTAG00000015099)	ERGIC1 (ENSBTAG00000015955) #26	DUSP1 (ENSBTAG00000013863) #28	NEURL1B (ENSBTAG00000001429) #29	SH3PXD2B (ENSBTAG00000009019) #30	UBTD2 (ENSBTAG00000034659) #31	EFCAB9 (ENSBTAG00000008876) #32	STK10 (ENSBTAG00000017457) #33	FBXW11 (ENSBTAG00000015376) #34	ENSBTAG00000053610	ENSBTAG00000054615	FGF18 (ENSBTAG00000000128) #37
Hybrid Bos Indicus	MODERN SPECIES	12	ENC1 (ENSBIXG00005002964)	ENSBIXG00005018309	ENSBIXG00005018408	ENSBIXG00005002985	GFM2 (ENSBIXG00005002998)	ENSBIXG00005018592	FAM169A (ENSBIXG00005018635)	MSX2 (ENSBIXG00005018660)	ENSBIXG00005003031	ENSBIXG00005018701	NSG2 (ENSBIXG00005018735) #17	ENSBIXG00005018775	CPEB4 (ENSBIXG00005018897) #19	ENSBIXG00005018925 #20	STC2 (ENSBIXG00005018970) #21	NKX2-5 (ENSBIXG00005018998) #22	BNIP1 (ENSBIXG00005019018) #23	CREBRF (ENSBIXG00005002650) #24	ENSBIXG00005019047	ENSBIXG00005005519 #25	ENSBIXG00005019189 #26	DUSP1 (ENSBIXG00005007821) #28	NEURL1B (ENSBIXG00005019283) #29	SH3PXD2B (ENSBIXG00005019342) #30	ENSBIXG00005003145	UBTD2 (ENSBIXG00005007823) #31	EFCAB9 (ENSBIXG00005019383) #32	STK10 (ENSBIXG00005019395) #33	FBXW11 (ENSBIXG00005006031) #34	ENSBIXG00005019479	ENSBIXG00005003177
Bos_a	ANCESTRAL SPECIES	74				ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a.r	ENSGT00390000008107.c.a.q	ENSGT00550000074890	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00420000029792.d	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.a #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT01000000218258	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b.m
Wild yak	MODERN SPECIES	1127		ENC1 (ENSBMUG00000018790)	ENSBMUG00000018779	ENSBMUG00000018337	GFM2 (ENSBMUG00000018109)	ENSBMUG00000018033	FAM169A (ENSBMUG00000017996)	MSX2 (ENSBMUG00000017970)	ENSBMUG00000017952	ENSBMUG00000017938	NSG2 (ENSBMUG00000017915) #17	ENSBMUG00000017901	CPEB4 (ENSBMUG00000017818) #19	ENSBMUG00000017636 #20	STC2 (ENSBMUG00000017613) #21	NKX2-5 (ENSBMUG00000017585) #22	BNIP1 (ENSBMUG00000017555) #23	CREBRF (ENSBMUG00000017514) #24	ENSBMUG00000017490 #25	RPL26L1 (ENSBMUG00000017477)	ERGIC1 (ENSBMUG00000017458) #26
Domestic yak	MODERN SPECIES	15					GFM2 (ENSBGRG00000012114)	ENSBGRG00000012164	ENSBGRG00000012194	FAM169A (ENSBGRG00000012377)	MSX2 (ENSBGRG00000012586)	NSG2 (ENSBGRG00000012654) #17	CPEB4 (ENSBGRG00000012907) #19	ENSBGRG00000013541	ENSBGRG00000013569	ENSBGRG00000013644 #20	STC2 (ENSBGRG00000013735) #21	NKX2-5 (ENSBGRG00000013796) #22	BNIP1 (ENSBGRG00000013853) #23	CREBRF (ENSBGRG00000014123) #24	ENSBGRG00000014274 #25	ENSBGRG00000014439	ERGIC1 (ENSBGRG00000014556) #26	DUSP1 (ENSBGRG00000015028) #28	NEURL1B (ENSBGRG00000015084) #29	SH3PXD2B (ENSBGRG00000015198) #30	ENSBGRG00000015339	STK10 (ENSBGRG00000015407) #33	ENSBGRG00000016111	EFCAB9 (ENSBGRG00000016153) #32	FBXW11 (ENSBGRG00000016280) #34	ENSBGRG00000016831	FGF18 (ENSBGRG00000016855) #37
American bison	MODERN SPECIES	3215															STC2 (ENSBBBG00000011679) #21	NKX2-5 (ENSBBBG00000011682) #22	BNIP1 (ENSBBBG00000011701) #23	CREBRF (ENSBBBG00000011711) #24	ENSBBBG00000011722 #25	RPL26L1 (ENSBBBG00000011726)	ERGIC1 (ENSBBBG00000002176) #26	DUSP1 (ENSBBBG00000011749) #28	NEURL1B (ENSBBBG00000011766) #29	SH3PXD2B (ENSBBBG00000011784) #30	UBTD2 (ENSBBBG00000011796) #31	EFCAB9 (ENSBBBG00000002192) #32	STK10 (ENSBBBG00000011816) #33	FBXW11 (ENSBBBG00000011859) #34	ENSBBBG00000007881	ENSBBBG00000011871	FGF18 (ENSBBBG00000011877) #37
Caprinae	ANCESTRAL SPECIES	24	ENSGT00390000004228	ENSGT00940000155831	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a.o	ENSGT00390000008107.c.a.p	ENSGT00550000074890	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000157760.e	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.a #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00390000016262.f	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b.m
Goat	MODERN SPECIES	12	ARHGEF28 (ENSCHIG00000013942)	ENC1 (ENSCHIG00000019428)	ENSCHIG00000008375	ENSCHIG00000020660	GFM2 (ENSCHIG00000012765)	ENSCHIG00000005844	FAM169A (ENSCHIG00000019541)	ENSCHIG00000023343	ENSCHIG00000013293	NSG2 (ENSCHIG00000005307) #17	C5orf47 (ENSCHIG00000015963) #18	CPEB4 (ENSCHIG00000011030) #19	ENSCHIG00000014604	ENSCHIG00000021511 #20	STC2 (ENSCHIG00000005361) #21	NKX2-5 (ENSCHIG00000017420) #22	BNIP1 (ENSCHIG00000007910) #23	CREBRF (ENSCHIG00000011720) #24	ENSCHIG00000023731 #25	RPL26L1 (ENSCHIG00000015371)	ERGIC1 (ENSCHIG00000000491) #26	DUSP1 (ENSCHIG00000021879) #28	NEURL1B (ENSCHIG00000011973) #29	SH3PXD2B (ENSCHIG00000017285) #30	ENSCHIG00000019482	UBTD2 (ENSCHIG00000008177) #31	STK10 (ENSCHIG00000022275) #33	FBXW11 (ENSCHIG00000015807) #34	ENSCHIG00000020677	FGF18 (ENSCHIG00000011455) #37	ENSCHIG00000013986
Rambouillet Sheep	MODERN SPECIES	7	ANKRA2 (ENSOARG00020022387)	UTP15 (ENSOARG00020022284)	ARHGEF28 (ENSOARG00020021605)	ENC1 (ENSOARG00020021534)	ENSOARG00020021358	GFM2 (ENSOARG00020021066)	ENSOARG00020020990	FAM169A (ENSOARG00020020874)	MSX2 (ENSOARG00020020841)	ENSOARG00020020789	NSG2 (ENSOARG00020020679) #17	C5orf47 (ENSOARG00020020601) #18	CPEB4 (ENSOARG00020019809) #19	ENSOARG00020019684 #20	STC2 (ENSOARG00020019635) #21	NKX2-5 (ENSOARG00020019608) #22	BNIP1 (ENSOARG00020019520) #23	CREBRF (ENSOARG00020019431) #24	ATP6V0E1 (ENSOARG00020019362) #25	RPL26L1 (ENSOARG00020019301)	ERGIC1 (ENSOARG00020019165) #26	DUSP1 (ENSOARG00020019107) #28	NEURL1B (ENSOARG00020018934) #29	SH3PXD2B (ENSOARG00020018558) #30	ENSOARG00020018509	UBTD2 (ENSOARG00020018478) #31	EFCAB9 (ENSOARG00020018435) #32	STK10 (ENSOARG00020017936) #33	ENSOARG00020017649 #34	FGF18 (ENSOARG00020017567) #37	ENSOARG00020017428
Siberian musk deer	MODERN SPECIES	182	UTP15 (ENSMMSG00000015177)	ENSMMSG00000015240	ARHGEF28 (ENSMMSG00000015336)	ENSMMSG00000015814	ENC1 (ENSMMSG00000015823)	ENSMMSG00000015830	GFM2 (ENSMMSG00000015843)	ENSMMSG00000015871	FAM169A (ENSMMSG00000015906)	ENSMMSG00000015984	NSG2 (ENSMMSG00000016007) #17	CPEB4 (ENSMMSG00000016141) #19	ENSMMSG00000016319	ENSMMSG00000016344 #20	STC2 (ENSMMSG00000016387) #21	NKX2-5 (ENSMMSG00000016422) #22	BNIP1 (ENSMMSG00000016447) #23	CREBRF (ENSMMSG00000016494) #24	ENSMMSG00000016537 #25	RPL26L1 (ENSMMSG00000016583)	ERGIC1 (ENSMMSG00000016601) #26	DUSP1 (ENSMMSG00000016631) #28	NEURL1B (ENSMMSG00000016666) #29	SH3PXD2B (ENSMMSG00000016746) #30	UBTD2 (ENSMMSG00000016799) #31	EFCAB9 (ENSMMSG00000016840) #32	STK10 (ENSMMSG00000016886) #33	FBXW11 (ENSMMSG00000016966) #34	FGF18 (ENSMMSG00000017102) #37	ENSMMSG00000017147	TLX3 (ENSMMSG00000017339)
Yarkand deer	MODERN SPECIES	17	ENSCHYG00000022585	ENSCHYG00000022494	ENSCHYG00000022377	ENSCHYG00000022361	ENSCHYG00000022316	ENSCHYG00000022222	GFM2 (ENSCHYG00000022008)	ENSCHYG00000021907	FAM169A (ENSCHYG00000021764)	MSX2 (ENSCHYG00000021730)	NSG2 (ENSCHYG00000021633) #17	C5orf47 (ENSCHYG00000021506) #18	CPEB4 (ENSCHYG00000020990) #19	ENSCHYG00000020876 #20	STC2 (ENSCHYG00000020794) #21	NKX2-5 (ENSCHYG00000020766) #22	BNIP1 (ENSCHYG00000020650) #23	CREBRF (ENSCHYG00000020340) #24	ENSCHYG00000020276 #25	ENSCHYG00000019954	DUSP1 (ENSCHYG00000019886) #28	NEURL1B (ENSCHYG00000019690) #29	SH3PXD2B (ENSCHYG00000019576) #30	EFCAB9 (ENSCHYG00000019485) #32	STK10 (ENSCHYG00000019133) #33	FBXW11 (ENSCHYG00000018168) #34	ENSCHYG00000018065	ENSCHYG00000017940	FGF18 (ENSCHYG00000017882) #37	ENSCHYG00000017754	TLX3 (ENSCHYG00000017695)
Cetacea	ANCESTRAL SPECIES	1	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.b.a.a.a #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b.k.a
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.b.a.a.a #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b.k.a.a.a
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.b.a.a.a #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b.k.a.b
Dolphin	MODERN SPECIES	4726															STC2 (ENSTTRG00000004501) #21	NKX2-5 (ENSTTRG00000004510) #22
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.b.a.a.a #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b.k.a.b
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00940000160017	ENSGT00390000000537.q	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00960000191423	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.db.b.a.a.a #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b.k.a.a.a
Narwhal	MODERN SPECIES	298	ENSMMNG00015008240	SIMC1 (ENSMMNG00015008207)	THOC3 (ENSMMNG00015008184)	CPLX2 (ENSMMNG00015008154)	HRH2 (ENSMMNG00015008125)	SFXN1 (ENSMMNG00015008092)	DRD1 (ENSMMNG00015008077)	ENSMMNG00015008062	MSX2 (ENSMMNG00015008049)	NSG2 (ENSMMNG00015008022) #17	C5orf47 (ENSMMNG00015008001) #18	CPEB4 (ENSMMNG00015007861) #19	ENSMMNG00015007782 #20	STC2 (ENSMMNG00015007763) #21	ENSMMNG00015007753	NKX2-5 (ENSMMNG00015007742) #22	BNIP1 (ENSMMNG00015007725) #23	CREBRF (ENSMMNG00015007693) #24	ENSMMNG00015007663 #25	RPL26L1 (ENSMMNG00015007637)	ENSMMNG00015007623	ERGIC1 (ENSMMNG00015007594) #26	DUSP1 (ENSMMNG00015007561) #28	NEURL1B (ENSMMNG00015007510) #29	SH3PXD2B (ENSMMNG00015007447) #30	UBTD2 (ENSMMNG00015007429) #31	EFCAB9 (ENSMMNG00015007406) #32	STK10 (ENSMMNG00015007367) #33	ENSMMNG00015007348	FBXW11 (ENSMMNG00015007223) #34	SMIM23 (ENSMMNG00015007147) #35
Beluga whale	MODERN SPECIES	33					CPLX2 (ENSDLEG00000010995)	HRH2 (ENSDLEG00000011017)	SFXN1 (ENSDLEG00000011033)	DRD1 (ENSDLEG00000011094)	ENSDLEG00000011099	MSX2 (ENSDLEG00000011108)	NSG2 (ENSDLEG00000011113) #17	C5orf47 (ENSDLEG00000011128) #18	CPEB4 (ENSDLEG00000011156) #19	ENSDLEG00000011214 #20	STC2 (ENSDLEG00000011225) #21	NKX2-5 (ENSDLEG00000011239) #22	BNIP1 (ENSDLEG00000011252) #23	CREBRF (ENSDLEG00000011269) #24	ATP6V0E1 (ENSDLEG00000011297) #25	RPL26L1 (ENSDLEG00000011305)	ERGIC1 (ENSDLEG00000011315) #26	ENSDLEG00000011343	DUSP1 (ENSDLEG00000011353) #28	NEURL1B (ENSDLEG00000011362) #29	SH3PXD2B (ENSDLEG00000011382) #30	UBTD2 (ENSDLEG00000011425) #31	EFCAB9 (ENSDLEG00000011435) #32	STK10 (ENSDLEG00000011442) #33	FBXW11 (ENSDLEG00000011487) #34	FGF18 (ENSDLEG00000011572) #37	ENSDLEG00000011597
Vaquita	MODERN SPECIES	14	ENSPSNG00000005946	THOC3 (ENSPSNG00000005986)	ENSPSNG00000006028	ENSPSNG00000006253	CPLX2 (ENSPSNG00000006307)	HRH2 (ENSPSNG00000006364)	SFXN1 (ENSPSNG00000006445)	DRD1 (ENSPSNG00000006598)	MSX2 (ENSPSNG00000006615)	NSG2 (ENSPSNG00000006661) #17	ENSPSNG00000006717	C5orf47 (ENSPSNG00000006745) #18	CPEB4 (ENSPSNG00000006810) #19	ENSPSNG00000006924 #20	STC2 (ENSPSNG00000006970) #21	NKX2-5 (ENSPSNG00000007002) #22	BNIP1 (ENSPSNG00000007042) #23	CREBRF (ENSPSNG00000007099) #24	ENSPSNG00000007148 #25	RPL26L1 (ENSPSNG00000007180)	ERGIC1 (ENSPSNG00000007216) #26	DUSP1 (ENSPSNG00000007271) #28	NEURL1B (ENSPSNG00000007317) #29	SH3PXD2B (ENSPSNG00000007402) #30	UBTD2 (ENSPSNG00000007475) #31	EFCAB9 (ENSPSNG00000007521) #32	STK10 (ENSPSNG00000007570) #33	ENSPSNG00000007596	FBXW11 (ENSPSNG00000007701) #34	SMIM23 (ENSPSNG00000007767) #35	FGF18 (ENSPSNG00000007820) #37
Sperm whale	MODERN SPECIES	11	ARL10 (ENSPCTG00005003080)	KIAA1191 (ENSPCTG00005003055)	SIMC1 (ENSPCTG00005003010)	THOC3 (ENSPCTG00005002986)	CPLX2 (ENSPCTG00005002960)	HRH2 (ENSPCTG00005002944)	SFXN1 (ENSPCTG00005002887)	DRD1 (ENSPCTG00005002869)	ENSPCTG00005002862	MSX2 (ENSPCTG00005002856)	NSG2 (ENSPCTG00005002847) #17	C5orf47 (ENSPCTG00005002836) #18	CPEB4 (ENSPCTG00005002819) #19	BOD1 (ENSPCTG00005002798) #20	STC2 (ENSPCTG00005002775) #21	NKX2-5 (ENSPCTG00005002758) #22	BNIP1 (ENSPCTG00005002731) #23	CREBRF (ENSPCTG00005002713) #24	ATP6V0E1 (ENSPCTG00005002688) #25	RPL26L1 (ENSPCTG00005002672)	ERGIC1 (ENSPCTG00005002638) #26	DUSP1 (ENSPCTG00005002618) #28	NEURL1B (ENSPCTG00005002578) #29	SH3PXD2B (ENSPCTG00005002536) #30	UBTD2 (ENSPCTG00005002517) #31	EFCAB9 (ENSPCTG00005002503) #32	STK10 (ENSPCTG00005002452) #33	FBXW11 (ENSPCTG00005002420) #34	SMIM23 (ENSPCTG00005002400) #35	FGF18 (ENSPCTG00005002388) #37	NPM1 (ENSPCTG00005002370)
Blue whale	MODERN SPECIES	14	ARL10 (ENSBMSG00010005897)	ENSBMSG00010005879	ENSBMSG00010011540	THOC3 (ENSBMSG00010011525)	CPLX2 (ENSBMSG00010011507)	HRH2 (ENSBMSG00010011490)	SFXN1 (ENSBMSG00010011469)	DRD1 (ENSBMSG00010011461)	MSX2 (ENSBMSG00010011455)	ENSBMSG00010011445	C5orf47 (ENSBMSG00010011434) #18	CPEB4 (ENSBMSG00010011385) #19	ENSBMSG00010011344 #20	STC2 (ENSBMSG00010011331) #21	ENSBMSG00010011323	NKX2-5 (ENSBMSG00010011319) #22	ENSBMSG00010011310	ENSBMSG00010011299	BNIP1 (ENSBMSG00010011290) #23	ENSBMSG00010011277	CREBRF (ENSBMSG00010011255) #24	ENSBMSG00010011236 #25	RPL26L1 (ENSBMSG00010011223)	ERGIC1 (ENSBMSG00010011201) #26	DUSP1 (ENSBMSG00010011183) #28	NEURL1B (ENSBMSG00010011096) #29	SH3PXD2B (ENSBMSG00010011059) #30	ENSBMSG00010011045	UBTD2 (ENSBMSG00010011030) #31	EFCAB9 (ENSBMSG00010011022) #32	ENSBMSG00010011019
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b
Carnivora	ANCESTRAL SPECIES	8	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b
Caniformia	ANCESTRAL SPECIES	5	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b
Ursidae	ANCESTRAL SPECIES	24	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000167072	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.b.b.b	ENSGT00390000014165.d	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501.a #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37
Ursus	ANCESTRAL SPECIES	10	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00940000167072	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.d	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501.a #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629
American black bear	MODERN SPECIES	5284																NKX2-5 (ENSUAMG00000003029) #22	BNIP1 (ENSUAMG00000003036) #23
Giant Panda	MODERN SPECIES	13	ARL10 (ENSAMEG00000006984)	KIAA1191 (ENSAMEG00000006961)	SIMC1 (ENSAMEG00000006950)	THOC3 (ENSAMEG00000006936)	CPLX2 (ENSAMEG00000006927)	HRH2 (ENSAMEG00000019735)	SFXN1 (ENSAMEG00000006906)	DRD1 (ENSAMEG00000006899)	MSX2 (ENSAMEG00000011380)	NSG2 (ENSAMEG00000011368) #17	ENSAMEG00000025521	CPEB4 (ENSAMEG00000011342) #19	ENSAMEG00000011333 #20	STC2 (ENSAMEG00000011326) #21	BNIP1 (ENSAMEG00000011310) #23	NKX2-5 (ENSAMEG00000028084) #22	CREBRF (ENSAMEG00000011290) #24	ATP6V0E1 (ENSAMEG00000029545) #25	ENSAMEG00000011270	ERGIC1 (ENSAMEG00000011244) #26	DUSP1 (ENSAMEG00000011224) #28	NEURL1B (ENSAMEG00000011213) #29	SH3PXD2B (ENSAMEG00000027237) #30	UBTD2 (ENSAMEG00000011190) #31	ENSAMEG00000011187 #32	STK10 (ENSAMEG00000011144) #33	FBXW11 (ENSAMEG00000011107) #34	SMIM23 (ENSAMEG00000027396) #35	FGF18 (ENSAMEG00000027271) #37	ENSAMEG00000003910	TLX3 (ENSAMEG00000003951)
Mustelinae	ANCESTRAL SPECIES	13	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b
American mink	MODERN SPECIES	101	NOP16 (ENSNVIG00000021573)	ARL10 (ENSNVIG00000021589)	KIAA1191 (ENSNVIG00000021600)	SIMC1 (ENSNVIG00000021625)	THOC3 (ENSNVIG00000021714)	CPLX2 (ENSNVIG00000021719)	HRH2 (ENSNVIG00000021752)	SFXN1 (ENSNVIG00000021762)	DRD1 (ENSNVIG00000021784)	MSX2 (ENSNVIG00000021793)	NSG2 (ENSNVIG00000021801) #17	C5orf47 (ENSNVIG00000021820) #18	CPEB4 (ENSNVIG00000021827) #19	ENSNVIG00000021892 #20	STC2 (ENSNVIG00000021901) #21	NKX2-5 (ENSNVIG00000021910) #22	SEC20 (ENSNVIG00000021912) #23	CREBRF (ENSNVIG00000021945) #24	ATP6V0E1 (ENSNVIG00000021974) #25	RPL26L1 (ENSNVIG00000022013)	ERGIC1 (ENSNVIG00000022026) #26	DUSP1 (ENSNVIG00000022051) #28	NEURL1B (ENSNVIG00000022058) #29	SH3PXD2B (ENSNVIG00000022076) #30	UBTD2 (ENSNVIG00000022111) #31	EFCAB9 (ENSNVIG00000022124) #32	STK10 (ENSNVIG00000022143) #33	FBXW11 (ENSNVIG00000022157) #34	FGF18 (ENSNVIG00000022241) #37	ENSNVIG00000022254	TLX3 (ENSNVIG00000022330)
Ferret	MODERN SPECIES	162	ENSMPUG00000012596	THOC3 (ENSMPUG00000012598)	CPLX2 (ENSMPUG00000012600)	HRH2 (ENSMPUG00000012609)	ENSMPUG00000012610	SFXN1 (ENSMPUG00000012616)	DRD1 (ENSMPUG00000019314)	ENSMPUG00000012670	MSX2 (ENSMPUG00000012673)	NSG2 (ENSMPUG00000012677) #17	C5orf47 (ENSMPUG00000012685) #18	CPEB4 (ENSMPUG00000012687) #19	ENSMPUG00000012689	ENSMPUG00000012693 #20	STC2 (ENSMPUG00000012704) #21	NKX2-5 (ENSMPUG00000012707) #22	BNIP1 (ENSMPUG00000012710) #23	CREBRF (ENSMPUG00000012726) #24	RPL26L1 (ENSMPUG00000012729)	ERGIC1 (ENSMPUG00000012743) #26	DUSP1 (ENSMPUG00000012746) #28	NEURL1B (ENSMPUG00000012751) #29	SH3PXD2B (ENSMPUG00000012754) #30	UBTD2 (ENSMPUG00000012758) #31	EFCAB9 (ENSMPUG00000012759) #32	STK10 (ENSMPUG00000012761) #33	ENSMPUG00000012767	FBXW11 (ENSMPUG00000012769) #34	ENSMPUG00000012839	SMIM23 (ENSMPUG00000012844) #35	FGF18 (ENSMPUG00000012855) #37
Canidae	ANCESTRAL SPECIES	7	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00390000008496.i.a	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.fb #25	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629
Canis_lupus	ANCESTRAL SPECIES	12	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00390000002732.m.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00390000008496.i.a	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866.fb #25	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b
Dog	MODERN SPECIES	32	KIAA1191 (ENSCAFG00845012621)	SIMC1 (ENSCAFG00845012793)	THOC3 (ENSCAFG00845012878)	HRH2 (ENSCAFG00845000234)	HRH2 (ENSCAFG00845000310)	ENSCAFG00845000366	SFXN1 (ENSCAFG00845000413)	DRD1 (ENSCAFG00845000442)	MSX2 (ENSCAFG00845000450)	CPEB4 (ENSCAFG00845000467) #17	C5orf47 (ENSCAFG00845000487) #18	CPEB4 (ENSCAFG00845000511) #19	ENSCAFG00845000535	ENSCAFG00845000564 #20	STC2 (ENSCAFG00845000605) #21	NKX2-5 (ENSCAFG00845000634) #22	BNIP1 (ENSCAFG00845000706) #23	CREBRF (ENSCAFG00845000727) #24	ATP6V0E1 (ENSCAFG00845000758) #25	ERGIC1 (ENSCAFG00845000852) #26	DUSP1 (ENSCAFG00845000953) #28	NEURL1B (ENSCAFG00845000993) #29	SH3PXD2B (ENSCAFG00845001080) #30	UBTD2 (ENSCAFG00845001180) #31	EFCAB9 (ENSCAFG00845001213) #32	STK10 (ENSCAFG00845001258) #33	FBXW11 (ENSCAFG00845001422) #34	SMIM23 (ENSCAFG00845001607) #35	ENSCAFG00845001623	FGF18 (ENSCAFG00845001658) #37	NPM1 (ENSCAFG00845001853)
Dingo	MODERN SPECIES	324	ENSCAFG00020011479	THOC3 (ENSCAFG00020011477)	CPLX2 (ENSCAFG00020011467)	ENSCAFG00020011464	HRH2 (ENSCAFG00020011462)	SFXN1 (ENSCAFG00020011449)	ENSCAFG00020011446	DRD1 (ENSCAFG00020011444)	MSX2 (ENSCAFG00020011431)	NSG2 (ENSCAFG00020011410) #17	C5orf47 (ENSCAFG00020011376) #18	CPEB4 (ENSCAFG00020011285) #19	ENSCAFG00020011279	ENSCAFG00020011274 #20	STC2 (ENSCAFG00020011270) #21	NKX2-5 (ENSCAFG00020011268) #22	BNIP1 (ENSCAFG00020011264) #23	CREBRF (ENSCAFG00020011261) #24	ENSCAFG00020011259 #25	ERGIC1 (ENSCAFG00020011256) #26	DUSP1 (ENSCAFG00020011252) #28	NEURL1B (ENSCAFG00020011251) #29	SH3PXD2B (ENSCAFG00020011225) #30	UBTD2 (ENSCAFG00020011220) #31	STK10 (ENSCAFG00020009145) #33	FBXW11 (ENSCAFG00020008756) #34	FGF18 (ENSCAFG00020008729) #37	ENSCAFG00020008713	TLX3 (ENSCAFG00020008709)	ENSCAFG00020008705	RANBP17 (ENSCAFG00020005518)
Red fox	MODERN SPECIES	2	KIAA1191 (ENSVVUG00000001791)	SIMC1 (ENSVVUG00000001816)	ENSVVUG00000001834	CPLX2 (ENSVVUG00000001853)	HRH2 (ENSVVUG00000001869)	ENSVVUG00000001911	DRD1 (ENSVVUG00000001913)	ENSVVUG00000001919	MSX2 (ENSVVUG00000001941)	NSG2 (ENSVVUG00000001985) #17	ENSVVUG00000002012	CPEB4 (ENSVVUG00000002022) #19	ENSVVUG00000002062	ENSVVUG00000002071 #20	STC2 (ENSVVUG00000002084) #21	NKX2-5 (ENSVVUG00000002086) #22	BNIP1 (ENSVVUG00000002123) #23	ENSVVUG00000002168	CREBRF (ENSVVUG00000002198) #24	ATP6V0E1 (ENSVVUG00000002213) #25	ENSVVUG00000002223	ERGIC1 (ENSVVUG00000002261) #26	DUSP1 (ENSVVUG00000002297) #28	ENSVVUG00000002314 #29	SH3PXD2B (ENSVVUG00000002354) #30	UBTD2 (ENSVVUG00000002372) #31	EFCAB9 (ENSVVUG00000002399) #32	STK10 (ENSVVUG00000002418) #33	FBXW11 (ENSVVUG00000002484) #34	SMIM23 (ENSVVUG00000002597) #35	FGF18 (ENSVVUG00000002630) #37
Felidae	ANCESTRAL SPECIES	6	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b
Panthera	ANCESTRAL SPECIES	6	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b
Tiger	MODERN SPECIES	175	ENSPTIG00000013371	GEM (ENSPTIG00000016878)	CDH17 (ENSPTIG00000017434)	PDP1 (ENSPTIG00000018605)	TMEM67 (ENSPTIG00000019697)	RBM12B (ENSPTIG00000020071)	CIBAR1 (ENSPTIG00000021531)	TRIQK (ENSPTIG00000009851)	ENSPTIG00000007336	ENSPTIG00000013341	ENSPTIG00000014067	ENSPTIG00000014905	CPEB4 (ENSPTIG00000015408) #19	ENSPTIG00000017876 #20	STC2 (ENSPTIG00000020657) #21	NKX2-5 (ENSPTIG00000021046) #22	BNIP1 (ENSPTIG00000021237) #23	CREBRF (ENSPTIG00000000444) #24	ATP6V0E1 (ENSPTIG00000005140) #25	RPL26L1 (ENSPTIG00000007028)	ERGIC1 (ENSPTIG00000008508) #26
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b
lion	MODERN SPECIES		NOP16 (ENSPLOG00000015130)	ARL10 (ENSPLOG00000015082)	KIAA1191 (ENSPLOG00000015041)	ENSPLOG00000014896	THOC3 (ENSPLOG00000014809)	CPLX2 (ENSPLOG00000014736)	HRH2 (ENSPLOG00000014696)	SFXN1 (ENSPLOG00000014636)	DRD1 (ENSPLOG00000014615)	MSX2 (ENSPLOG00000014575)	NSG2 (ENSPLOG00000014484) #17	C5orf47 (ENSPLOG00000014426) #18	CPEB4 (ENSPLOG00000014177) #19	ENSPLOG00000014087 #20	STC2 (ENSPLOG00000014037) #21	NKX2-5 (ENSPLOG00000014000) #22	BNIP1 (ENSPLOG00000013932) #23	CREBRF (ENSPLOG00000013863) #24	ATP6V0E1 (ENSPLOG00000013764) #25	RPL26L1 (ENSPLOG00000013719)	ERGIC1 (ENSPLOG00000013645) #26	DUSP1 (ENSPLOG00000013584) #28	NEURL1B (ENSPLOG00000013404) #29	SH3PXD2B (ENSPLOG00000013192) #30	UBTD2 (ENSPLOG00000013141) #31	EFCAB9 (ENSPLOG00000013080) #32	STK10 (ENSPLOG00000013044) #33	FBXW11 (ENSPLOG00000012707) #34	FGF18 (ENSPLOG00000012527) #37	ENSPLOG00000012460	TLX3 (ENSPLOG00000012406)
leopard	MODERN SPECIES	18	ENSPPRG00000015618	NOP16 (ENSPPRG00000016600)	ARL10 (ENSPPRG00000017068)	KIAA1191 (ENSPPRG00000017956)	ENSPPRG00000020005	THOC3 (ENSPPRG00000020316)	CPLX2 (ENSPPRG00000024229)	HRH2 (ENSPPRG00000023957)	SFXN1 (ENSPPRG00000023613)	DRD1 (ENSPPRG00000019529)	MSX2 (ENSPPRG00000023106)	NSG2 (ENSPPRG00000000307) #17	CPEB4 (ENSPPRG00000001603) #19	ENSPPRG00000003207 #20	STC2 (ENSPPRG00000003601) #21	NKX2-5 (ENSPPRG00000004094) #22	BNIP1 (ENSPPRG00000005455) #23	CREBRF (ENSPPRG00000005970) #24	ATP6V0E1 (ENSPPRG00000006470) #25	RPL26L1 (ENSPPRG00000006918)	ERGIC1 (ENSPPRG00000008276) #26	DUSP1 (ENSPPRG00000008559) #28	NEURL1B (ENSPPRG00000009165) #29	SH3PXD2B (ENSPPRG00000009689) #30	UBTD2 (ENSPPRG00000010187) #31	EFCAB9 (ENSPPRG00000011345) #32	STK10 (ENSPPRG00000011731) #33	FBXW11 (ENSPPRG00000012730) #34	SMIM23 (ENSPPRG00000013401) #35	FGF18 (ENSPPRG00000013778) #37	ENSPPRG00000014990
Cat	MODERN SPECIES		ARL10 (ENSFCAG00000042295)	KIAA1191 (ENSFCAG00000007189)	SIMC1 (ENSFCAG00000023224)	ENSFCAG00000044857	CPLX2 (ENSFCAG00000036578)	HRH2 (ENSFCAG00000024815)	SFXN1 (ENSFCAG00000015407)	DRD1 (ENSFCAG00000000764)	ENSFCAG00000025391	MSX2 (ENSFCAG00000033871)	NSG2 (ENSFCAG00000022137) #17	ENSFCAG00000041207 #18	CPEB4 (ENSFCAG00000031504) #19	ENSFCAG00000021908 #20	STC2 (ENSFCAG00000046627) #21	NKX2-5 (ENSFCAG00000000539) #22	BNIP1 (ENSFCAG00000000536) #23	CREBRF (ENSFCAG00000000534) #24	ATP6V0E1 (ENSFCAG00000031789) #25	RPL26L1 (ENSFCAG00000026949)	ERGIC1 (ENSFCAG00000011258) #26	DUSP1 (ENSFCAG00000037697) #28	NEURL1B (ENSFCAG00000031157) #29	SH3PXD2B (ENSFCAG00000038295) #30	UBTD2 (ENSFCAG00000044346) #31	EFCAB9 (ENSFCAG00000016235) #32	STK10 (ENSFCAG00000000434) #33	FBXW11 (ENSFCAG00000027834) #34	SMIM23 (ENSFCAG00000044613) #35	FGF18 (ENSFCAG00000007079) #37	NPM1 (ENSFCAG00000030268)
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00940000159553 #37	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629
Greater horseshoe bat	MODERN SPECIES	16	TMEM130 (ENSRFEG00010008383)	ARL10 (ENSRFEG00010008335)	KIAA1191 (ENSRFEG00010008281)	SIMC1 (ENSRFEG00010008176)	THOC3 (ENSRFEG00010008126)	CPLX2 (ENSRFEG00010008067)	HRH2 (ENSRFEG00010008040)	SFXN1 (ENSRFEG00010007993)	DRD1 (ENSRFEG00010007981)	MSX2 (ENSRFEG00010007947)	NSG2 (ENSRFEG00010007915) #17	C5orf47 (ENSRFEG00010007860) #18	CPEB4 (ENSRFEG00010007464) #19	ENSRFEG00010007368 #20	STC2 (ENSRFEG00010007301) #21	NKX2-5 (ENSRFEG00010007273) #22	BNIP1 (ENSRFEG00010007189) #23	CREBRF (ENSRFEG00010007123) #24	ENSRFEG00010007076 #25	RPL26L1 (ENSRFEG00010007037)	ERGIC1 (ENSRFEG00010006938) #26	DUSP1 (ENSRFEG00010006882) #28	NEURL1B (ENSRFEG00010006802) #29	SH3PXD2B (ENSRFEG00010006731) #30	UBTD2 (ENSRFEG00010006696) #31	EFCAB9 (ENSRFEG00010006675) #32	STK10 (ENSRFEG00010006622) #33	FBXW11 (ENSRFEG00010006429) #34	FGF18 (ENSRFEG00010006277) #37	ENSRFEG00010006113	TLX3 (ENSRFEG00010005948)
Megabat	MODERN SPECIES	4167															STC2 (ENSPVAG00000003244) #21	NKX2-5 (ENSPVAG00000003246) #22	BNIP1 (ENSPVAG00000003247) #23	CREBRF (ENSPVAG00000003249) #24	ATP6V0E1 (ENSPVAG00000003251) #25	RPL26L1 (ENSPVAG00000003253)	ERGIC1 (ENSPVAG00000003254) #26	DUSP1 (ENSPVAG00000003258) #28	NEURL1B (ENSPVAG00000003260) #29
Equus	ANCESTRAL SPECIES	6	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00640000091672 #18	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00950000183120.e.b.a.a.b.b.a.b	ENSGT00940000159553 #37
Horse	MODERN SPECIES	5	ENSECAG00000020914	ARL10 (ENSECAG00000029432)	SIMC1 (ENSECAG00000009246)	KIAA1191 (ENSECAG00000003238)	THOC3 (ENSECAG00000011555)	CPLX2 (ENSECAG00000014632)	HRH2 (ENSECAG00000016581)	SFXN1 (ENSECAG00000018755)	DRD1 (ENSECAG00000011620)	MSX2 (ENSECAG00000011749)	NSG2 (ENSECAG00000013801) #17	C14H5orf47 (ENSECAG00000015624) #18	CPEB4 (ENSECAG00000016921) #19	ENSECAG00000021784 #20	STC2 (ENSECAG00000022263) #21	NKX2-5 (ENSECAG00000023495) #22	BNIP1 (ENSECAG00000023543) #23	CREBRF (ENSECAG00000024559) #24	RPL26L1 (ENSECAG00000000869) #25	ENSECAG00000059561	ERGIC1 (ENSECAG00000007541) #26	DUSP1 (ENSECAG00000009958) #28	NEURL1B (ENSECAG00000039619) #29	SH3PXD2B (ENSECAG00000009968) #30	UBTD2 (ENSECAG00000038912) #31	EFCAB9 (ENSECAG00000015586) #32	STK10 (ENSECAG00000016265) #33	FBXW11 (ENSECAG00000011756) #34	SMIM23 (ENSECAG00000018524) #35	ENSECAG00000049830	ENSECAG00000003655
Donkey	MODERN SPECIES	29	ENSEASG00005032426	NOP16 (ENSEASG00005011988)	ARL10 (ENSEASG00005030196)	KIAA1191 (ENSEASG00005011978)	SIMC1 (ENSEASG00005011973)	THOC3 (ENSEASG00005011970)	CPLX2 (ENSEASG00005011968)	HRH2 (ENSEASG00005011967)	SFXN1 (ENSEASG00005011962)	DRD1 (ENSEASG00005026731)	MSX2 (ENSEASG00005036074)	ENSEASG00005025007 #18	CPEB4 (ENSEASG00005011952) #19	ENSEASG00005011948 #20	STC2 (ENSEASG00005024262) #21	NKX2-5 (ENSEASG00005011942) #22	BNIP1 (ENSEASG00005027404) #23	CREBRF (ENSEASG00005011938) #24	ATP6V0E1 (ENSEASG00005011936) #25	RPL26L1 (ENSEASG00005011935)	ERGIC1 (ENSEASG00005011934) #26	DUSP1 (ENSEASG00005011932) #28	NEURL1B (ENSEASG00005028285) #29	SH3PXD2B (ENSEASG00005011927) #30	UBTD2 (ENSEASG00005028770) #31	EFCAB9 (ENSEASG00005011925) #32	STK10 (ENSEASG00005011922) #33	FBXW11 (ENSEASG00005011915) #34	SMIM23 (ENSEASG00005024362) #35	ENSEASG00005011908	FGF18 (ENSEASG00005033570) #37
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000158996 #22
Common shrew	MODERN SPECIES	9876																NKX2-5 (ENSSARG00000002300) #22
Atlantogenata	ANCESTRAL SPECIES		ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.d	ENSGT00940000160629
Afrotheria	ANCESTRAL SPECIES	7	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.d	ENSGT00940000160629
Tenrec	MODERN SPECIES	16410																NKX2-5 (ENSETEG00000014039) #22
Afrotheria_a	ANCESTRAL SPECIES	7	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00390000014165.c.b	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.d	ENSGT00940000160629
Elephant	MODERN SPECIES	2	ENSLAFG00000028186	NOP16 (ENSLAFG00000017886)	ARL10 (ENSLAFG00000017880)	KIAA1191 (ENSLAFG00000028878)	SIMC1 (ENSLAFG00000017874)	THOC3 (ENSLAFG00000016609)	CPLX2 (ENSLAFG00000020627)	HRH2 (ENSLAFG00000004764)	SFXN1 (ENSLAFG00000002243)	DRD1 (ENSLAFG00000010433)	MSX2 (ENSLAFG00000001916)	NSG2 (ENSLAFG00000028103) #17	CPEB4 (ENSLAFG00000016030) #19	ENSLAFG00000003066 #20	STC2 (ENSLAFG00000006193) #21	NKX2-5 (ENSLAFG00000029311) #22	ENSLAFG00000027511 #23	CREBRF (ENSLAFG00000013690) #24	RPL26L1 (ENSLAFG00000006797)	ERGIC1 (ENSLAFG00000006791) #26	DUSP1 (ENSLAFG00000007743) #28	NEURL1B (ENSLAFG00000020677) #29	ENSLAFG00000029644	SH3PXD2B (ENSLAFG00000016210) #30	UBTD2 (ENSLAFG00000011441) #31	EFCAB9 (ENSLAFG00000020630) #32	ENSLAFG00000023319 #33	FBXW11 (ENSLAFG00000006465) #34	SMIM23 (ENSLAFG00000007608) #35	FGF18 (ENSLAFG00000021964) #37	ENSLAFG00000007677
Hyrax	MODERN SPECIES	8450																NKX2-5 (ENSPCAG00000013736) #22
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000158996 #22
Armadillo	MODERN SPECIES	290																NKX2-5 (ENSDNOG00000015890) #22
Marsupialia	ANCESTRAL SPECIES	9	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a	ENSGT00390000005589.a.b	ENSGT00390000011206.b	ENSGT00940000160854	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37	ENSGT00940000153052.b.a
Opossum	MODERN SPECIES		AFAP1L1 (ENSMODG00000005760)	GRPEL2 (ENSMODG00000005775)	ENSMODG00000040849	PCYOX1L (ENSMODG00000005809)	IL17B (ENSMODG00000005817)	JAKMIP2 (ENSMODG00000005857)	ENSMODG00000005887	DRD1 (ENSMODG00000023683)	ENSMODG00000040970	MSX2 (ENSMODG00000005933)	ENSMODG00000023086	ENSMODG00000006007 #17	CPEB4 (ENSMODG00000006036) #19	ENSMODG00000006047 #20	STC2 (ENSMODG00000006146) #21	NKX2-5 (ENSMODG00000006154) #22	BNIP1 (ENSMODG00000044680) #23	CREBRF (ENSMODG00000006184) #24	ATP6V0E1 (ENSMODG00000044657) #25	ENSMODG00000006201	ERGIC1 (ENSMODG00000006214) #26	DUSP1 (ENSMODG00000050204) #28	NEURL1B (ENSMODG00000006234) #29	SH3PXD2B (ENSMODG00000006308) #30	UBTD2 (ENSMODG00000006341) #31	EFCAB9 (ENSMODG00000006348) #32	ENSMODG00000006392	STK10 (ENSMODG00000006383) #33	ENSMODG00000006398	FBXW11 (ENSMODG00000006464) #34	ENSMODG00000040419
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b.f	ENSGT00950000182850.a.b.a.b.b.e	ENSGT00950000183067.a.b.a	ENSGT00390000005589.a.b	ENSGT00390000011206.b	ENSGT00940000160854	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00390000002856	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b.f	ENSGT00950000182850.a.b.a.b.b.e	ENSGT00950000183067.a.b.a	ENSGT00390000005589.a.b	ENSGT00390000011206.b	ENSGT00940000160854	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00390000002856	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35	ENSGT00940000159553 #37
Wallaby	MODERN SPECIES	14510																ENSMEUG00000011672 #22
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00950000182850.a.b.a.b.b.f	ENSGT00950000182850.a.b.a.b.b.e	ENSGT00950000183067.a.b.a	ENSGT00390000005589.a.b	ENSGT00390000011206.b	ENSGT00940000160854	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00940000154576.d	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00390000002856	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000168748.a.a	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156641 #31	ENSGT00390000007501 #32	ENSGT00940000156818 #33	ENSGT00940000155898 #34	ENSGT00390000017300 #35
Common wonbat	MODERN SPECIES	1087	SH3TC2 (ENSVURG00010000134)	ENSVURG00010000169	AFAP1L1 (ENSVURG00010000196)	GRPEL2 (ENSVURG00010000242)	PCYOX1L (ENSVURG00010000251)	IL17B (ENSVURG00010000264)	JAKMIP2 (ENSVURG00010000289)	SFXN1 (ENSVURG00010000324)	DRD1 (ENSVURG00010000352)	MSX2 (ENSVURG00010000371)	NSG2 (ENSVURG00010000391) #17	CPEB4 (ENSVURG00010000453) #19	ENSVURG00010000764 #20	ENSVURG00010000781	STC2 (ENSVURG00010000867) #21	ENSVURG00010000877 #22	BNIP1 (ENSVURG00010000889) #23	ENSVURG00010000900	CREBRF (ENSVURG00010000924) #24	ATP6V0E1 (ENSVURG00010000934) #25	ENSVURG00010000947	ERGIC1 (ENSVURG00010000991) #26	DUSP1 (ENSVURG00010001003) #28	NEURL1B (ENSVURG00010001019) #29	ENSVURG00010001025	SH3PXD2B (ENSVURG00010001083) #30	UBTD2 (ENSVURG00010001111) #31	EFCAB9 (ENSVURG00010001123) #32	STK10 (ENSVURG00010001138) #33	FBXW11 (ENSVURG00010001229) #34	FGF18 (ENSVURG00010001447) #37
koala	MODERN SPECIES	189	AFAP1L1 (ENSPCIG00000030220)	GRPEL2 (ENSPCIG00000030218)	PCYOX1L (ENSPCIG00000016832)	IL17B (ENSPCIG00000016831)	JAKMIP2 (ENSPCIG00000006340)	SFXN1 (ENSPCIG00000014031)	DRD1 (ENSPCIG00000014024)	ENSPCIG00000009006	MSX2 (ENSPCIG00000010374)	ENSPCIG00000028337	NSG2 (ENSPCIG00000020950) #17	CPEB4 (ENSPCIG00000015843) #19	ENSPCIG00000005513 #20	ENSPCIG00000005521	STC2 (ENSPCIG00000024498) #21	NKX2-5 (ENSPCIG00000024493) #22	BNIP1 (ENSPCIG00000024492) #23	CREBRF (ENSPCIG00000024487) #24	ATP6V0E1 (ENSPCIG00000024485) #25	ERGIC1 (ENSPCIG00000013566) #26	DUSP1 (ENSPCIG00000013569) #28	ENSPCIG00000013571	NEURL1B (ENSPCIG00000013574) #29
Tasmanian devil	MODERN SPECIES	1	ADRB2 (ENSSHAG00000012084)	SH3TC2 (ENSSHAG00000011495)	ABLIM3 (ENSSHAG00000010285)	AFAP1L1 (ENSSHAG00000009663)	GRPEL2 (ENSSHAG00000009365)	PCYOX1L (ENSSHAG00000031829)	ENSSHAG00000009123	ENSSHAG00000007136	ENSSHAG00000027708	DRD1 (ENSSHAG00000024944)	MSX2 (ENSSHAG00000024059)	NSG2 (ENSSHAG00000026505) #17	CPEB4 (ENSSHAG00000025977) #19	ENSSHAG00000027063 #20	STC2 (ENSSHAG00000025128) #21	NKX2-5 (ENSSHAG00000008877) #22	BNIP1 (ENSSHAG00000028003) #23	CREBRF (ENSSHAG00000007714) #24	ATP6V0E1 (ENSSHAG00000029538) #25	ENSSHAG00000028181	ERGIC1 (ENSSHAG00000004451) #26	DUSP1 (ENSSHAG00000002204) #28	ENSSHAG00000025417	NEURL1B (ENSSHAG00000002600) #29	SH3PXD2B (ENSSHAG00000027120) #30	EFCAB9 (ENSSHAG00000022167) #32	UBTD2 (ENSSHAG00000024875) #31	STK10 (ENSSHAG00000012835) #33	FBXW11 (ENSSHAG00000012435) #34	ENSSHAG00000011730 #35	FGF18 (ENSSHAG00000031040) #37
Platypus	MODERN SPECIES	84	GRXCR2 (ENSOANG00000050122)	SH3RF2 (ENSOANG00000005754)	ENSOANG00000032054	LARS1 (ENSOANG00000005755)	RBM27 (ENSOANG00000012563)	ENSOANG00000008710	DPYSL3 (ENSOANG00000012564)	JAKMIP2 (ENSOANG00000012565)	SFXN1 (ENSOANG00000049587)	DRD1 (ENSOANG00000015988)	MSX2 (ENSOANG00000038291)	NSG2 (ENSOANG00000014066) #17	CPEB4 (ENSOANG00000047376) #19	ENSOANG00000045637 #20	STC2 (ENSOANG00000041282) #21	NKX2-5 (ENSOANG00000037400) #22	BNIP1 (ENSOANG00000046862) #23	CREBRF (ENSOANG00000003984) #24	ENSOANG00000021011	ENSOANG00000022022	ERGIC1 (ENSOANG00000040410) #26	DUSP1 (ENSOANG00000040425) #28	NEURL1B (ENSOANG00000014559) #29	SH3PXD2B (ENSOANG00000040007) #30	STK10 (ENSOANG00000010949) #33	ENSOANG00000039699 #32	UBTD2 (ENSOANG00000006605) #31	TBC1D9B (ENSOANG00000004120)	RNF130 (ENSOANG00000020588)	FLT4 (ENSOANG00000001739)	ENSOANG00000004351
Sauria	ANCESTRAL SPECIES	17	ENSGT00510000046929.b	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a
Archelosauria	ANCESTRAL SPECIES	15	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00960000189397	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a
Cryptodira	ANCESTRAL SPECIES	15	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00960000189397	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a
Testudinoidea	ANCESTRAL SPECIES	5	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00960000189397	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a
Emydidae	ANCESTRAL SPECIES	11	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00960000189397	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a
Three-toed box turtle	MODERN SPECIES	306	POU4F3 (ENSTMTG00000016791)	TCERG1 (ENSTMTG00000016641)	GPR151 (ENSTMTG00000016627)	PPP2R2B (ENSTMTG00000016580)	ENSTMTG00000016562	STK32A (ENSTMTG00000016542)	DPYSL3 (ENSTMTG00000016524)	JAKMIP2 (ENSTMTG00000016252)	SFXN1 (ENSTMTG00000016177)	DRD1 (ENSTMTG00000016164)	MSX2 (ENSTMTG00000016146)	NSG2 (ENSTMTG00000016123) #17	CPEB4 (ENSTMTG00000016106) #19	ENSTMTG00000016098 #20	STC2 (ENSTMTG00000016072) #21	NKX2-5 (ENSTMTG00000016062) #22	BNIP1 (ENSTMTG00000016046) #23	CREBRF (ENSTMTG00000016023) #24	ATP6V0E1 (ENSTMTG00000016014) #25	RPL26 (ENSTMTG00000016009)	ERGIC1 (ENSTMTG00000015990) #26
painted turtle	MODERN SPECIES	2385						ENSCPBG00000007451	JAKMIP2 (ENSCPBG00000007471)	ENSCPBG00000007495	SFXN1 (ENSCPBG00000007501)	DRD1 (ENSCPBG00000007519)	MSX2 (ENSCPBG00000007524)	NSG2 (ENSCPBG00000007528) #17	CPEB4 (ENSCPBG00000007535) #19	ENSCPBG00000007551 #20	STC2 (ENSCPBG00000007560) #21	NKX2-5 (ENSCPBG00000007563) #22	BNIP1 (ENSCPBG00000007566) #23	CREBRF (ENSCPBG00000007577) #24	ATP6V0E1 (ENSCPBG00000007589) #25	RPL26 (ENSCPBG00000007593)	ERGIC1 (ENSCPBG00000007601) #26	ENSCPBG00000007606	DUSP1 (ENSCPBG00000007611) #28	NEURL1B (ENSCPBG00000007630) #29	SH3PXD2B (ENSCPBG00000007639) #30	STK10 (ENSCPBG00000007660) #33	EFCAB9 (ENSCPBG00000007673) #32	UBTD2 (ENSCPBG00000007679) #31	ADRB2 (ENSCPBG00000007688)	SH3TC2 (ENSCPBG00000007700)	ABLIM3 (ENSCPBG00000007739)
Testudinidae	ANCESTRAL SPECIES	16	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00960000189397	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a
Goode s thornscrub tortoise	MODERN SPECIES	22	POU4F3 (ENSGEVG00005007692)	TCERG1 (ENSGEVG00005007732)	GPR151 (ENSGEVG00005007825)	PPP2R2B (ENSGEVG00005007863)	ENSGEVG00005007956	STK32A (ENSGEVG00005008055)	DPYSL3 (ENSGEVG00005008376)	JAKMIP2 (ENSGEVG00005008675)	SFXN1 (ENSGEVG00005008741)	DRD1 (ENSGEVG00005008773)	MSX2 (ENSGEVG00005008781)	NSG2 (ENSGEVG00005008810) #17	CPEB4 (ENSGEVG00005008855) #19	ENSGEVG00005008890 #20	STC2 (ENSGEVG00005009015) #21	NKX2-5 (ENSGEVG00005009080) #22	BNIP1 (ENSGEVG00005009102) #23	CREBRF (ENSGEVG00005009119) #24	ATP6V0E1 (ENSGEVG00005009147) #25	RPL26 (ENSGEVG00005009170)	ERGIC1 (ENSGEVG00005009233) #26	DUSP1 (ENSGEVG00005009360) #28	NEURL1B (ENSGEVG00005009384) #29	ENSGEVG00005009402 #30	ENSGEVG00005009428 #30	STK10 (ENSGEVG00005009569) #33	EFCAB9 (ENSGEVG00005009608) #32	UBTD2 (ENSGEVG00005009650) #31	ADRB2 (ENSGEVG00005009673)	SH3TC2 (ENSGEVG00005009752)	ENSGEVG00005009824
Abingdon island giant tortoise	MODERN SPECIES	2182	RBM27 (ENSCABG00000013726)	POU4F3 (ENSCABG00000013834)	TCERG1 (ENSCABG00000013840)	GPR151 (ENSCABG00000013856)	PPP2R2B (ENSCABG00000013861)	STK32A (ENSCABG00000013883)	DPYSL3 (ENSCABG00000013893)	JAKMIP2 (ENSCABG00000014001)	SFXN1 (ENSCABG00000014092)	DRD1 (ENSCABG00000014096)	MSX2 (ENSCABG00000014103)	NSG2 (ENSCABG00000014111) #17	CPEB4 (ENSCABG00000014114) #19	ENSCABG00000014117 #20	STC2 (ENSCABG00000014121) #21	NKX2-5 (ENSCABG00000014122) #22	BNIP1 (ENSCABG00000014124) #23	CREBRF (ENSCABG00000014125) #24	ATP6V0E1 (ENSCABG00000014145) #25	RPL26 (ENSCABG00000014147)	ERGIC1 (ENSCABG00000014150) #26	DUSP1 (ENSCABG00000014155) #28	NEURL1B (ENSCABG00000014167) #29	ENSCABG00000014173 #30	ENSCABG00000014175 #30	STK10 (ENSCABG00000014196) #33	EFCAB9 (ENSCABG00000014578) #32	UBTD2 (ENSCABG00000014580) #31
Chinese turtle	MODERN SPECIES	2220															STC2 (ENSPSIG00000015246) #21	NKX2-5 (ENSPSIG00000014981) #22	BNIP1 (ENSPSIG00000014624) #23	CREBRF (ENSPSIG00000013820) #24	ATP6V0E1 (ENSPSIG00000013593) #25	RPL26 (ENSPSIG00000013153)	ERGIC1 (ENSPSIG00000011786) #26	DUSP1 (ENSPSIG00000011093) #28	NEURL1B (ENSPSIG00000010315) #29	SH3PXD2B (ENSPSIG00000010303) #30	STK10 (ENSPSIG00000009241) #33	EFCAB9 (ENSPSIG00000009216) #32	UBTD2 (ENSPSIG00000009210) #31	ADRB2 (ENSPSIG00000008710)	SH3TC2 (ENSPSIG00000007989)	ABLIM3 (ENSPSIG00000006198)	AFAP1L1 (ENSPSIG00000015614)
Archosauria	ANCESTRAL SPECIES	17	ENSGT00510000046929.b	ENSGT00940000160880	ENSGT00940000157770	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00960000189397	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a
Australian saltwater crocodile	MODERN SPECIES	34	LARS1 (ENSCPRG00005008167)	RBM27 (ENSCPRG00005008156)	POU4F3 (ENSCPRG00005008153)	TCERG1 (ENSCPRG00005008131)	PPP2R2B (ENSCPRG00005008119)	STK32A (ENSCPRG00005008085)	DPYSL3 (ENSCPRG00005008055)	JAKMIP2 (ENSCPRG00005008002)	SFXN1 (ENSCPRG00005007987)	DRD1 (ENSCPRG00005007982)	MSX2 (ENSCPRG00005007971)	NSG2 (ENSCPRG00005007959) #17	CPEB4 (ENSCPRG00005007956) #19	ENSCPRG00005007939 #20	STC2 (ENSCPRG00005007937) #21	NKX2-5 (ENSCPRG00005007932) #22	BNIP1 (ENSCPRG00005007919) #23	CREBRF (ENSCPRG00005007915) #24	ATP6V0E1 (ENSCPRG00005007904) #25	RPL26 (ENSCPRG00005007902)	ERGIC1 (ENSCPRG00005007890) #26	DUSP1 (ENSCPRG00005007884) #28	NEURL1B (ENSCPRG00005007875) #29	SH3PXD2B (ENSCPRG00005007836) #30	STK10 (ENSCPRG00005007810) #33	EFCAB9 (ENSCPRG00005007806) #32	UBTD2 (ENSCPRG00005007804) #31	ADRB2 (ENSCPRG00005007778)	SH3TC2 (ENSCPRG00005007768)	ABLIM3 (ENSCPRG00005007745)	AFAP1L1 (ENSCPRG00005007715)
Aves	ANCESTRAL SPECIES	15	ENSGT00940000161364	ENSGT00940000164577	ENSGT00940000158355	ENSGT00940000157712	ENSGT00940000158603	ENSGT00550000074939	ENSGT00530000064262	ENSGT00940000156931	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a	ENSGT00390000005589.a.b
Neognathae	ANCESTRAL SPECIES	14	ENSGT00940000164577	ENSGT00940000158355	ENSGT00940000157712	ENSGT00940000158603	ENSGT00550000074939	ENSGT00530000064262	ENSGT00940000156931	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00960000189351	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a	ENSGT00390000005589.a.b
Neognathae_b	ANCESTRAL SPECIES	16	ENSGT00940000164577	ENSGT00940000158355	ENSGT00940000157712	ENSGT00940000158603	ENSGT00550000074939	ENSGT00530000064262	ENSGT00940000156931	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00960000189351	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a	ENSGT00390000005589.a.b
Neognathae_c	ANCESTRAL SPECIES	19	ENSGT00940000161364	ENSGT00940000164577	ENSGT00940000158355	ENSGT00940000157712	ENSGT00940000158603	ENSGT00550000074939	ENSGT00530000064262	ENSGT00940000156931	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a	ENSGT00390000005589.a.b	ENSGT00390000011206.b
Kakapo	MODERN SPECIES	6	ENSSHBG00005016051	LMAN2 (ENSSHBG00005016058)	B4GALT7 (ENSSHBG00005016061)	N4BP3 (ENSSHBG00005016066)	NHP2 (ENSSHBG00005016071)	ENSSHBG00005016079	BRD8 (ENSSHBG00005016089)	KIF20A (ENSSHBG00005016103)	SFXN1 (ENSSHBG00005016111)	DRD1 (ENSSHBG00005016119)	MSX2 (ENSSHBG00005016120)	NSG2 (ENSSHBG00005016125) #17	CPEB4 (ENSSHBG00005016128) #19	ENSSHBG00005016151 #20	STC2 (ENSSHBG00005016156) #21	NKX2-5 (ENSSHBG00005016162) #22	BNIP1 (ENSSHBG00005016165) #23	CREBRF (ENSSHBG00005016175) #24	RPL26 (ENSSHBG00005016182)	ERGIC1 (ENSSHBG00005016189) #26	DUSP1 (ENSSHBG00005016192) #28	NEURL1B (ENSSHBG00005016201) #29	SH3PXD2B (ENSSHBG00005016219) #30	STK10 (ENSSHBG00005016343) #33	UBTD2 (ENSSHBG00005017971) #31	ADRB2 (ENSSHBG00005017975)	SH3TC2 (ENSSHBG00005017984)	ABLIM3 (ENSSHBG00005018000)	AFAP1L1 (ENSSHBG00005018003)	GRPEL2 (ENSSHBG00005018006)	PCYOX1L (ENSSHBG00005018008)
Golden eagle	MODERN SPECIES	14	ENSACCG00020013259	LMAN2 (ENSACCG00020013237)	B4GALT7 (ENSACCG00020013211)	N4BP3 (ENSACCG00020013192)	NHP2 (ENSACCG00020013180)	ENSACCG00020013163	BRD8 (ENSACCG00020013116)	KIF20A (ENSACCG00020013060)	SFXN1 (ENSACCG00020013026)	DRD1 (ENSACCG00020013006)	MSX2 (ENSACCG00020012994)	NSG2 (ENSACCG00020012980) #17	CPEB4 (ENSACCG00020012959) #19	ENSACCG00020012917 #20	STC2 (ENSACCG00020012896) #21	NKX2-5 (ENSACCG00020012874) #22	BNIP1 (ENSACCG00020012856) #23	CREBRF (ENSACCG00020012815) #24	RPL26 (ENSACCG00020012774)	ERGIC1 (ENSACCG00020012710) #26	ENSACCG00020012686	DUSP1 (ENSACCG00020012672) #28	NEURL1B (ENSACCG00020012648) #29	SH3PXD2B (ENSACCG00020012626) #30	STK10 (ENSACCG00020012579) #33	UBTD2 (ENSACCG00020012552) #31	ADRB2 (ENSACCG00020012531)	SH3TC2 (ENSACCG00020012431)	ABLIM3 (ENSACCG00020012238)	AFAP1L1 (ENSACCG00020012061)	GRPEL2 (ENSACCG00020011972)
Passeriformes	ANCESTRAL SPECIES	14	ENSGT00940000164577	ENSGT00940000158355	ENSGT00940000157712	ENSGT00940000158603	ENSGT00550000074939	ENSGT00530000064262	ENSGT00940000156931	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00960000189351	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a	ENSGT00390000005589.a.b
Great tit	MODERN SPECIES	4	LMAN2 (ENSPMJG00000006590)	B4GALT7 (ENSPMJG00000006588)	N4BP3 (ENSPMJG00000006587)	ENSPMJG00000006586	BRD8 (ENSPMJG00000006568)	ENSPMJG00000006566	KIF20A (ENSPMJG00000006560)	SFXN1 (ENSPMJG00000006556)	DRD1 (ENSPMJG00000006555)	MSX2 (ENSPMJG00000006547)	NSG2 (ENSPMJG00000006538) #17	ENSPMJG00000006535	CPEB4 (ENSPMJG00000006528) #19	ENSPMJG00000006523 #20	STC2 (ENSPMJG00000006490) #21	NKX2-5 (ENSPMJG00000006487) #22	BNIP1 (ENSPMJG00000006485) #23	CREBRF (ENSPMJG00000006480) #24	RPL26 (ENSPMJG00000006464)	ERGIC1 (ENSPMJG00000006461) #26	DUSP1 (ENSPMJG00000006458) #28	NEURL1B (ENSPMJG00000006456) #29	SH3PXD2B (ENSPMJG00000006447) #30	STK10 (ENSPMJG00000006445) #33	UBTD2 (ENSPMJG00000006444) #31	ADRB2 (ENSPMJG00000006425)	SH3TC2 (ENSPMJG00000006424)	ABLIM3 (ENSPMJG00000006419)	AFAP1L1 (ENSPMJG00000006405)	GRPEL2 (ENSPMJG00000006401)	PCYOX1L (ENSPMJG00000006393)
Passeriformes_d	ANCESTRAL SPECIES	15	ENSGT00940000164577	ENSGT00940000158355	ENSGT00940000157712	ENSGT00940000158603	ENSGT00550000074939	ENSGT00530000064262	ENSGT00940000156931	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT01040000244634	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a	ENSGT00390000005589.a.b
Flycatcher	MODERN SPECIES	4	ENSFALG00000008757	LMAN2 (ENSFALG00000008760)	B4GALT7 (ENSFALG00000008765)	ENSFALG00000008770	NHP2 (ENSFALG00000022995)	ENSFALG00000008777	ENSFALG00000008790	SFXN1 (ENSFALG00000008804)	DRD1 (ENSFALG00000014407)	ENSFALG00000028772	MSX2 (ENSFALG00000014415)	NSG2 (ENSFALG00000027426) #17	CPEB4 (ENSFALG00000008809) #19	ENSFALG00000008811 #20	STC2 (ENSFALG00000025551) #21	NKX2-5 (ENSFALG00000008813) #22	ENSFALG00000008815	CREBRF (ENSFALG00000008816) #24	ATP6V0E1 (ENSFALG00000008817) #25	ENSFALG00000008818	ERGIC1 (ENSFALG00000008820) #26	DUSP1 (ENSFALG00000008823) #28	ENSFALG00000008824 #29	SH3PXD2B (ENSFALG00000008827) #30	ENSFALG00000008830 #33	ENSFALG00000008833 #31	ADRB2 (ENSFALG00000014433)	SH3TC2 (ENSFALG00000008835)	ABLIM3 (ENSFALG00000008837)	AFAP1L1 (ENSFALG00000008840)	GRPEL2 (ENSFALG00000008841)
Passeriformes_g	ANCESTRAL SPECIES	15	ENSGT00940000164577	ENSGT00940000158355	ENSGT00940000157712	ENSGT00940000158603	ENSGT00550000074939	ENSGT00530000064262	ENSGT00940000156931	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT01040000244634	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a	ENSGT00390000005589.a.b
Medium ground finch	MODERN SPECIES	11	ENSGFOG00000006724	LMAN2 (ENSGFOG00000006778)	B4GALT7 (ENSGFOG00000006792)	N4BP3 (ENSGFOG00000006801)	NHP2 (ENSGFOG00000006854)	BRD8 (ENSGFOG00000006877)	KIF20A (ENSGFOG00000006909)	SFXN1 (ENSGFOG00000006922)	DRD1 (ENSGFOG00000006934)	ENSGFOG00000006940	MSX2 (ENSGFOG00000006943)	ENSGFOG00000006950	NSG2 (ENSGFOG00000006955) #17	CPEB4 (ENSGFOG00000006967) #19	STC2 (ENSGFOG00000006981) #21	NKX2-5 (ENSGFOG00000006986) #22	BNIP1 (ENSGFOG00000006991) #23	CREBRF (ENSGFOG00000006997) #24	ATP6V0E1 (ENSGFOG00000007006) #25	RPL26 (ENSGFOG00000007011)	ERGIC1 (ENSGFOG00000007022) #26	DUSP1 (ENSGFOG00000007032) #28	NEURL1B (ENSGFOG00000007039) #29	SH3PXD2B (ENSGFOG00000007045) #30	STK10 (ENSGFOG00000007164) #33	UBTD2 (ENSGFOG00000010545) #31	ADRB2 (ENSGFOG00000010549)	ENSGFOG00000010556	ABLIM3 (ENSGFOG00000010564)	AFAP1L1 (ENSGFOG00000010583)	GRPEL2 (ENSGFOG00000010597)
Passeroidea	ANCESTRAL SPECIES	15	ENSGT00940000161364	ENSGT00940000164577	ENSGT00940000158355	ENSGT00940000157712	ENSGT00940000158603	ENSGT00550000074939	ENSGT00530000064262	ENSGT00940000156931	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a	ENSGT00390000005589.a.b
Common canary	MODERN SPECIES	83												MSX2 (ENSSCAG00000014719)	NSG2 (ENSSCAG00000014709) #17	CPEB4 (ENSSCAG00000014705) #19	STC2 (ENSSCAG00000014701) #21	NKX2-5 (ENSSCAG00000014697) #22	BNIP1 (ENSSCAG00000014689) #23	CREBRF (ENSSCAG00000014684) #24	ATP6V0E1 (ENSSCAG00000014677) #25	RPL26 (ENSSCAG00000014672)	ERGIC1 (ENSSCAG00000014667) #26	DUSP1 (ENSSCAG00000014657) #28	DRD1 (ENSSCAG00000014652)
Zebra finch	MODERN SPECIES	4	RGS14 (ENSTGUG00000000381)	ENSTGUG00000000378	LMAN2 (ENSTGUG00000000376)	B4GALT7 (ENSTGUG00000000370)	NHP2 (ENSTGUG00000000368)	BRD8 (ENSTGUG00000000354)	KIF20A (ENSTGUG00000000345)	SFXN1 (ENSTGUG00000000341)	DRD1 (ENSTGUG00000000340)	MSX2 (ENSTGUG00000000339)	NSG2 (ENSTGUG00000000333) #17	ENSTGUG00000021029	CPEB4 (ENSTGUG00000000329) #19	ENSTGUG00000000324 #20	STC2 (ENSTGUG00000029550) #21	NKX2-5 (ENSTGUG00000020969) #22	BNIP1 (ENSTGUG00000000316) #23	CREBRF (ENSTGUG00000000314) #24	ENSTGUG00000026118	RPL26 (ENSTGUG00000000309)	ERGIC1 (ENSTGUG00000000300) #26	DUSP1 (ENSTGUG00000000299) #28	NEURL1B (ENSTGUG00000000298) #29	SH3PXD2B (ENSTGUG00000022640) #30	STK10 (ENSTGUG00000000289) #33	UBTD2 (ENSTGUG00000029278) #31	ADRB2 (ENSTGUG00000000286)	SH3TC2 (ENSTGUG00000000277)	ABLIM3 (ENSTGUG00000000269)	AFAP1L1 (ENSTGUG00000000263)	GRPEL2 (ENSTGUG00000027926)
Galloanserae	ANCESTRAL SPECIES	14	ENSGT00940000164577	ENSGT00940000158355	ENSGT00940000157712	ENSGT00940000158603	ENSGT00550000074939	ENSGT00530000064262	ENSGT00940000156931	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00960000189351	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a	ENSGT00390000005589.a.b
Phasianidae	ANCESTRAL SPECIES	14	ENSGT00940000164577	ENSGT00940000158355	ENSGT00940000157712	ENSGT00940000158603	ENSGT00550000074939	ENSGT00530000064262	ENSGT00940000156931	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00960000189351	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b.h	ENSGT00950000183067.a.b.a	ENSGT00390000005589.a.b
Japanese quail	MODERN SPECIES	4	LMAN2 (ENSCJPG00005009012)	B4GALT7 (ENSCJPG00005009011)	N4BP3 (ENSCJPG00005009010)	NHP2 (ENSCJPG00005009009)	ENSCJPG00005009001	BRD8 (ENSCJPG00005009000)	KIF20A (ENSCJPG00005008860)	SFXN1 (ENSCJPG00005008857)	DRD1 (ENSCJPG00005008855)	MSX2 (ENSCJPG00005008848)	NSG2 (ENSCJPG00005008842) #17	ENSCJPG00005008841	CPEB4 (ENSCJPG00005008840) #19	ENSCJPG00005008838 #20	STC2 (ENSCJPG00005008836) #21	NKX2-5 (ENSCJPG00005008835) #22	BNIP1 (ENSCJPG00005008834) #23	CREBRF (ENSCJPG00005008833) #24	ATP6V0E1 (ENSCJPG00005008830) #25	RPL26 (ENSCJPG00005008829)	ERGIC1 (ENSCJPG00005008827) #26	DUSP1 (ENSCJPG00005008826) #28	NEURL1B (ENSCJPG00005008825) #29	SH3PXD2B (ENSCJPG00005008824) #30	STK10 (ENSCJPG00005008823) #33	UBTD2 (ENSCJPG00005008822) #31	ADRB2 (ENSCJPG00005008819)	SH3TC2 (ENSCJPG00005008812)	ABLIM3 (ENSCJPG00005008809)	AFAP1L1 (ENSCJPG00005008808)	GRPEL2 (ENSCJPG00005008807)
Phasianidae_b	ANCESTRAL SPECIES	18	ENSGT00940000164577	ENSGT00940000158355	ENSGT00940000157712	ENSGT00940000158603	ENSGT00550000074939	ENSGT00530000064262	ENSGT00940000156931	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00960000189351	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b.h	ENSGT00950000183067.a.b.a	ENSGT00390000005589.a.b
Chicken	MODERN SPECIES	4	B4GALT7 (ENSGALG00010012040)	GRK6 (ENSGALG00010012031)	N4BP3 (ENSGALG00010012017)	NHP2 (ENSGALG00010012228)	ENSGALG00010013000	BRD8 (ENSGALG00010012216)	KIF20A (ENSGALG00010012186)	SFXN1 (ENSGALG00010012149)	DRD1 (ENSGALG00010012111)	MSX2 (ENSGALG00010008416)	HMP19 (ENSGALG00010009415) #17	ENSGALG00010009397	CPEB4 (ENSGALG00010009389) #19	ENSGALG00010009378 #20	STC2 (ENSGALG00010009346) #21	NKX2-5 (ENSGALG00010009324) #22	BNIP1 (ENSGALG00010009311) #23	CREBRF (ENSGALG00010009256) #24	ATP6V0E1 (ENSGALG00010009228) #25	RPL26L1 (ENSGALG00010009170)	ERGIC1 (ENSGALG00010009117) #26	DUSP1 (ENSGALG00010008227) #28	NEURL1B (ENSGALG00010012391) #29	SH3PXD2B (ENSGALG00010012382) #30	STK10 (ENSGALG00010012358) #33	UBTD2 (ENSGALG00010012327) #31	ADRB2 (ENSGALG00010012314)	SH3TC2 (ENSGALG00010012312)	ABLIM3 (ENSGALG00010012297)	AFAP1L1 (ENSGALG00010011745)	GRPEL2 (ENSGALG00010011784)
Turkey	MODERN SPECIES	6	ENSMGAG00000004198	ENSMGAG00000004170	LMAN2 (ENSMGAG00000004147)	ENSMGAG00000004135	ENSMGAG00000004103	ENSMGAG00000019593	ENSMGAG00000003959	ENSMGAG00000003923	SFXN1 (ENSMGAG00000003820)	DRD1 (ENSMGAG00000015442)	MSX2 (ENSMGAG00000003712)	NSG2 (ENSMGAG00000003692) #17	CPEB4 (ENSMGAG00000003660) #19	ENSMGAG00000003652 #20	STC2 (ENSMGAG00000019072) #21	NKX2-5 (ENSMGAG00000021311) #22	BNIP1 (ENSMGAG00000003611) #23	CREBRF (ENSMGAG00000003597) #24	ENSMGAG00000003585	ERGIC1 (ENSMGAG00000003565) #26	DUSP1 (ENSMGAG00000003557) #28	ENSMGAG00000003546 #29	SH3PXD2B (ENSMGAG00000003508) #30	ENSMGAG00000003464 #33	ENSMGAG00000003447 #31	ADRB2 (ENSMGAG00000022062)	ENSMGAG00000003360	AFAP1L1 (ENSMGAG00000003323)	PCYOX1L (ENSMGAG00000003301)	ENSMGAG00000021310	CSNK1A1 (ENSMGAG00000003239)
Anatidae	ANCESTRAL SPECIES	15	ENSGT00940000161364	ENSGT00940000164577	ENSGT00940000158355	ENSGT00940000157712	ENSGT00940000158603	ENSGT00530000064262	ENSGT00940000156931	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00960000189351	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396.i #30	ENSGT00940000156818 #33	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00390000001803	ENSGT00940000163328	ENSGT00940000153768.b
Duck	MODERN SPECIES	5	ZNF346 (ENSAPLG00000002968)	UIMC1 (ENSAPLG00000017474)	HK3 (ENSAPLG00000023983)	ENSAPLG00000024064	SLC34A1 (ENSAPLG00000011205)	N4BP3 (ENSAPLG00000017170)	BRD8 (ENSAPLG00000009994)	KIF20A (ENSAPLG00000009529)	SFXN1 (ENSAPLG00000009192)	DRD1 (ENSAPLG00000001868)	MSX2 (ENSAPLG00000014116)	NSG2 (ENSAPLG00000014133) #17	CPEB4 (ENSAPLG00000022911) #19	ENSAPLG00000002435 #20	STC2 (ENSAPLG00000002303) #21	NKX2-5 (ENSAPLG00000027109) #22	BNIP1 (ENSAPLG00000019770) #23	CREBRF (ENSAPLG00000015493) #24	ATP6V0E1 (ENSAPLG00000015489) #25	RPL26 (ENSAPLG00000015384)	ERGIC1 (ENSAPLG00000015229) #26	DUSP1 (ENSAPLG00000015094) #28	NEURL1B (ENSAPLG00000014967) #29	ENSAPLG00000027587 #30	ENSAPLG00000003738 #30	STK10 (ENSAPLG00000003252) #33	ENSAPLG00000023824	UBTD2 (ENSAPLG00000003246) #31	ADRB2 (ENSAPLG00000001729)	SH3TC2 (ENSAPLG00000002842)	ENSAPLG00000002721
Pink-footed goose	MODERN SPECIES	9	RGS14 (ENSABRG00000015214)	ENSABRG00000015199	LMAN2 (ENSABRG00000015197)	B4GALT7 (ENSABRG00000015195)	N4BP3 (ENSABRG00000015193)	BRD8 (ENSABRG00000015161)	KIF20A (ENSABRG00000015140)	SFXN1 (ENSABRG00000015135)	DRD1 (ENSABRG00000015133)	MSX2 (ENSABRG00000015126)	NSG2 (ENSABRG00000015110) #17	ENSABRG00000015107	CPEB4 (ENSABRG00000015105) #19	ENSABRG00000015097 #20	STC2 (ENSABRG00000015092) #21	NKX2-5 (ENSABRG00000015089) #22	BNIP1 (ENSABRG00000015071) #23	CREBRF (ENSABRG00000015069) #24	ATP6V0E1 (ENSABRG00000015067) #25	RPL26 (ENSABRG00000015065)	ERGIC1 (ENSABRG00000015062) #26	DUSP1 (ENSABRG00000015058) #28	NEURL1B (ENSABRG00000015049) #29	SH3PXD2B (ENSABRG00000015043) #30	STK10 (ENSABRG00000015024) #33	UBTD2 (ENSABRG00000015011) #31	ADRB2 (ENSABRG00000015003)	SH3TC2 (ENSABRG00000014994)	ENSABRG00000014990	ENSABRG00000014986	SRA1 (ENSABRG00000014976)
African ostrich	MODERN SPECIES	151																NKX2-5 (ENSSCUG00000002861) #22	BNIP1 (ENSSCUG00000002862) #23	CREBRF (ENSSCUG00000002864) #24	ENSSCUG00000002866	RPL26 (ENSSCUG00000002868)	ERGIC1 (ENSSCUG00000002870) #26	DUSP1 (ENSSCUG00000002873) #28	NEURL1B (ENSSCUG00000002876) #29	SH3PXD2B (ENSSCUG00000002881) #30	STK10 (ENSSCUG00000002883) #33	UBTD2 (ENSSCUG00000002885) #31	ADRB2 (ENSSCUG00000002887)	SH3TC2 (ENSSCUG00000002891)	ABLIM3 (ENSSCUG00000002892)	AFAP1L1 (ENSSCUG00000002902)	GRPEL2 (ENSSCUG00000002905)
Lepidosauria	ANCESTRAL SPECIES	15	ENSGT00510000046929.b	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a
tuatara	MODERN SPECIES	1391															STC2 (ENSSPUG00000008220) #21	NKX2-5 (ENSSPUG00000008213) #22	BNIP1 (ENSSPUG00000008210) #23	CREBRF (ENSSPUG00000008205) #24	ENSSPUG00000008198 #25	RPL26 (ENSSPUG00000008194)	ERGIC1 (ENSSPUG00000008187) #26	DUSP1 (ENSSPUG00000008180) #28
Episquamata	ANCESTRAL SPECIES	4	ENSGT00510000046929.b	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a
Laterata	ANCESTRAL SPECIES	1	ENSGT00510000046929.b	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a
Common wall lizard	MODERN SPECIES	10	PPP2R2B (ENSPMRG00000011127)	STK32A (ENSPMRG00000010954)	DPYSL3 (ENSPMRG00000010921)	JAKMIP2 (ENSPMRG00000010885)	ENSPMRG00000010875	SFXN1 (ENSPMRG00000010861)	DRD1 (ENSPMRG00000010857)	ENSPMRG00000010855	ENSPMRG00000010852	MSX2 (ENSPMRG00000010849)	NSG2 (ENSPMRG00000010843) #17	CPEB4 (ENSPMRG00000010826) #19	ENSPMRG00000010820 #20	ENSPMRG00000010817	STC2 (ENSPMRG00000010807) #21	NKX2-5 (ENSPMRG00000010802) #22	ENSPMRG00000010791	BNIP1 (ENSPMRG00000010790) #23	CREBRF (ENSPMRG00000010780) #24	ENSPMRG00000010776	ATP6V0E1 (ENSPMRG00000010773) #25	RPL26 (ENSPMRG00000015148)	ERGIC1 (ENSPMRG00000015142) #26	DUSP1 (ENSPMRG00000015139) #28	NEURL1B (ENSPMRG00000015130) #29	SH3PXD2B (ENSPMRG00000015116) #30	EFCAB9 (ENSPMRG00000015112) #32	STK10 (ENSPMRG00000015086) #33	ADRB2 (ENSPMRG00000015071)	SH3TC2 (ENSPMRG00000015037)	ABLIM3 (ENSPMRG00000014945)
Argentine black and white tegu	MODERN SPECIES	1	RBM27 (ENSSMRG00000018037)	POU4F3 (ENSSMRG00000018043)	TCERG1 (ENSSMRG00000018044)	GPR151 (ENSSMRG00000018046)	PPP2R2B (ENSSMRG00000018051)	STK32A (ENSSMRG00000018063)	DPYSL3 (ENSSMRG00000018135)	JAKMIP2 (ENSSMRG00000018139)	SFXN1 (ENSSMRG00000018164)	DRD1 (ENSSMRG00000018166)	MSX2 (ENSSMRG00000018167)	NSG2 (ENSSMRG00000000041) #17	CPEB4 (ENSSMRG00000000069) #19	ENSSMRG00000000165 #20	STC2 (ENSSMRG00000000202) #21	NKX2-5 (ENSSMRG00000000222) #22	BNIP1 (ENSSMRG00000000231) #23	CREBRF (ENSSMRG00000000260) #24	ATP6V0E1 (ENSSMRG00000000286) #25	RPL26 (ENSSMRG00000000294)	ERGIC1 (ENSSMRG00000000312) #26	DUSP1 (ENSSMRG00000000325) #28	NEURL1B (ENSSMRG00000000401) #29	SH3PXD2B (ENSSMRG00000000416) #30	STK10 (ENSSMRG00000000484) #33	EFCAB9 (ENSSMRG00000000510) #32	UBTD2 (ENSSMRG00000000513) #31	ENSSMRG00000000551	ADRB2 (ENSSMRG00000000556)	SH3TC2 (ENSSMRG00000000562)	ABLIM3 (ENSSMRG00000000668)
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00510000046929.b	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818 #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a
Elapidae	ANCESTRAL SPECIES	2	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00990000213989	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a.o	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a.b #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818.p #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a
Elapidae_a	ANCESTRAL SPECIES	11	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00990000213989	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a.o	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a.b #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818.p #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a
Acanthophiinae	ANCESTRAL SPECIES	12	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00990000213989	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a.o	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a.b #19	ENSGT00940000154979 #20	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396 #30	ENSGT00940000156818.p #33	ENSGT00390000007501 #32	ENSGT00940000156641 #31	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000183067.a.b.a
Eastern brown snake	MODERN SPECIES	6	RBM27 (ENSPTXG00000001170)	POU4F3 (ENSPTXG00000001165)	TCERG1 (ENSPTXG00000001158)	GPR151 (ENSPTXG00000001150)	PPP2R2B (ENSPTXG00000001144)	STK32A (ENSPTXG00000001095)	DPYSL3 (ENSPTXG00000001090)	JAKMIP2 (ENSPTXG00000001086)	SFXN1 (ENSPTXG00000001080)	DRD1 (ENSPTXG00000001077)	MSX2 (ENSPTXG00000001074)	NSG2 (ENSPTXG00000001071) #17	CPEB4 (ENSPTXG00000001069) #19	ENSPTXG00000001067 #20	STC2 (ENSPTXG00000001061) #21	NKX2-5 (ENSPTXG00000001049) #22	BNIP1 (ENSPTXG00000001046) #23	CREBRF (ENSPTXG00000001039) #24	ATP6V0E1 (ENSPTXG00000001035) #25	RPL26 (ENSPTXG00000001032)	ERGIC1 (ENSPTXG00000001026) #26	DUSP1 (ENSPTXG00000001023) #28	NEURL1B (ENSPTXG00000001020) #29	SH3PXD2B (ENSPTXG00000001015) #30	STK10 (ENSPTXG00000000694) #33	EFCAB9 (ENSPTXG00000000630) #32	UBTD2 (ENSPTXG00000000628) #31	ADRB2 (ENSPTXG00000000624)	SH3TC2 (ENSPTXG00000000607)	ABLIM3 (ENSPTXG00000000575)	AFAP1L1 (ENSPTXG00000000554)
Mainland tiger snake	MODERN SPECIES	4	ENSNSUG00000010333	STK32A (ENSNSUG00000010334)	DPYSL3 (ENSNSUG00000010352)	JAKMIP2 (ENSNSUG00000010451)	SFXN1 (ENSNSUG00000010483)	DRD1 (ENSNSUG00000010484)	ENSNSUG00000010485	ENSNSUG00000010487	ENSNSUG00000010488	ENSNSUG00000010493	NSG2 (ENSNSUG00000010497) #17	CPEB4 (ENSNSUG00000010499) #19	ENSNSUG00000010502 #20	ENSNSUG00000010505	STC2 (ENSNSUG00000010506) #21	NKX2-5 (ENSNSUG00000010507) #22	BNIP1 (ENSNSUG00000010509) #23	CREBRF (ENSNSUG00000010517) #24	ATP6V0E1 (ENSNSUG00000010542) #25	RPL26 (ENSNSUG00000010543)	ERGIC1 (ENSNSUG00000010544) #26	DUSP1 (ENSNSUG00000010548) #28	NEURL1B (ENSNSUG00000010551) #29	SH3PXD2B (ENSNSUG00000010565) #30	STK10 (ENSNSUG00000010569) #33	EFCAB9 (ENSNSUG00000010573) #32	UBTD2 (ENSNSUG00000010577) #31	ADRB2 (ENSNSUG00000010579)	SH3TC2 (ENSNSUG00000010581)	ABLIM3 (ENSNSUG00000010584)	AFAP1L1 (ENSNSUG00000010596)
Blue-lipped sea krait	MODERN SPECIES	6606															STC2 (ENSLLTG00000010447) #21	NKX2-5 (ENSLLTG00000010424) #22	BNIP1 (ENSLLTG00000010411) #23	CREBRF (ENSLLTG00000010386) #24	ATP6V0E1 (ENSLLTG00000010362) #25
Indian cobra	MODERN SPECIES	1	POU4F3 (ENSNNAG00000013139)	TCERG1 (ENSNNAG00000013161)	GPR151 (ENSNNAG00000013194)	PPP2R2B (ENSNNAG00000013207)	ENSNNAG00000013291	STK32A (ENSNNAG00000013311)	DPYSL3 (ENSNNAG00000013525)	JAKMIP2 (ENSNNAG00000014540)	SFXN1 (ENSNNAG00000014618)	DRD1 (ENSNNAG00000014640)	MSX2 (ENSNNAG00000014650)	NSG2 (ENSNNAG00000014660) #17	CPEB4 (ENSNNAG00000014689) #19	ENSNNAG00000014713 #20	STC2 (ENSNNAG00000014718) #21	NKX2-5 (ENSNNAG00000014737) #22	BNIP1 (ENSNNAG00000014746) #23	CREBRF (ENSNNAG00000014762) #24	ATP6V0E1 (ENSNNAG00000000299) #25	RPL26 (ENSNNAG00000000313)	ERGIC1 (ENSNNAG00000000336) #26	DUSP1 (ENSNNAG00000000362) #28	NEURL1B (ENSNNAG00000000391) #29	SH3PXD2B (ENSNNAG00000000415) #30	STK10 (ENSNNAG00000000463) #33	EFCAB9 (ENSNNAG00000000494) #32	UBTD2 (ENSNNAG00000000511) #31	ADRB2 (ENSNNAG00000000525)	SH3TC2 (ENSNNAG00000000550)	ABLIM3 (ENSNNAG00000000585)	AFAP1L1 (ENSNNAG00000000702)
Lizard	MODERN SPECIES	1	FGF1 (ENSACAG00000043127)	ARHGAP26 (ENSACAG00000013456)	NR3C1 (ENSACAG00000013668)	ENSACAG00000009454	FOSL2 (ENSACAG00000009506)	ENSACAG00000044182	BABAM2 (ENSACAG00000009552)	ENSACAG00000039011	RBKS (ENSACAG00000009636)	ENSACAG00000037255	ENSACAG00000036914	SLC4A1AP (ENSACAG00000009669)	SUPT7L (ENSACAG00000009730)	ENSACAG00000043354	STC2 (ENSACAG00000044393) #21	NKX2-5 (ENSACAG00000015142) #22	ENSACAG00000038558	ENSACAG00000035116	BNIP1 (ENSACAG00000015149) #23	CREBRF (ENSACAG00000015164) #24	ATP6V0E1 (ENSACAG00000015183) #25	ENSACAG00000015187	ERGIC1 (ENSACAG00000015210) #26	DUSP1 (ENSACAG00000015246) #28	ENSACAG00000039578	ENSACAG00000015261 #29	SH3PXD2B (ENSACAG00000042684) #30	ENSACAG00000036124	STK10 (ENSACAG00000015294) #33	ENSACAG00000015404 #32	UBTD2 (ENSACAG00000015415) #31
Anura	ANCESTRAL SPECIES	123	ENSGT00390000012163	ENSGT00510000046929.b	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153713.B.d	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #17	ENSGT00940000154998.a.a #19	ENSGT00390000005989.a #21	ENSGT00940000158996 #22	ENSGT00390000014412 #23	ENSGT00390000007125.b #24	ENSGT00940000156866 #25	ENSGT00390000014165.d	ENSGT00530000063113.C #26	ENSGT00940000159044 #28	ENSGT00940000157079.a #29	ENSGT00940000158396.r #30
Frog	MODERN SPECIES	3	pole4 (ENSXETG00000014422)	sh3pxd2b (ENSXETG00000038056) #30	ENSXETG00000042376	ENSXETG00000040995	neurl1b (ENSXETG00000001703) #29	ergic1 (ENSXETG00000018301) #26	dusp1 (ENSXETG00000027880) #28	tlr22 (ENSXETG00000046119)	sfxn1 (ENSXETG00000035035)	drd1 (ENSXETG00000013921)	msx2 (ENSXETG00000009168)	ENSXETG00000041565	nsg2 (ENSXETG00000009166) #17	cpeb4 (ENSXETG00000012731) #19	stc2 (ENSXETG00000012730) #21	nkx2-5 (ENSXETG00000012729) #22	bnip1 (ENSXETG00000044127) #23	crebrf (ENSXETG00000012727) #24	ENSXETG00000042330	atp6v0e1 (ENSXETG00000024781) #25	jakmip2 (ENSXETG00000012726)	rpl26 (ENSXETG00000024782)	dpysl3 (ENSXETG00000012718)	stk32a (ENSXETG00000012715)	arhgef37 (ENSXETG00000012714)	ppargc1b (ENSXETG00000012711)	pde6a (ENSXETG00000012709)	slc26a2 (ENSXETG00000049390)	slc26a2.2 (ENSXETG00000031991)	ENSXETG00000045931	ENSXETG00000047377
Leishan spiny toad	MODERN SPECIES	6	STK32A (ENSLLEG00000005750)	DPYSL3 (ENSLLEG00000005868)	ENSLLEG00000006286	JAKMIP2 (ENSLLEG00000006335)	SFXN1 (ENSLLEG00000006593)	ENSLLEG00000006728	DRD1 (ENSLLEG00000006740)	MSX2 (ENSLLEG00000006764)	ENSLLEG00000006787	ENSLLEG00000006796	NSG2 (ENSLLEG00000006827) #17	ENSLLEG00000006910	CPEB4 (ENSLLEG00000006945) #19	ENSLLEG00000007121	STC2 (ENSLLEG00000007140) #21	NKX2-5 (ENSLLEG00000007176) #22	BNIP1 (ENSLLEG00000007209) #23	CREBRF (ENSLLEG00000007256) #24	ATP6V0E1 (ENSLLEG00000007416) #25	ENSLLEG00000007449	ERGIC1 (ENSLLEG00000007494) #26	DUSP1 (ENSLLEG00000007651) #28	ENSLLEG00000007678	ENSLLEG00000007690	ENSLLEG00000007700	NEURL1B (ENSLLEG00000007712) #29	SH3PXD2B (ENSLLEG00000007755) #30	STK10 (ENSLLEG00000007889) #33	UBTD2 (ENSLLEG00000008051) #31	ENSLLEG00000008087	ADRB2 (ENSLLEG00000008145)