Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT01050000247847	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000173435	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195
Boreoeutheria	ANCESTRAL SPECIES	15	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000173435	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195
Euarchontoglires	ANCESTRAL SPECIES	15	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000173435	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195
Primates	ANCESTRAL SPECIES	14	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000173435	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195
Haplorrhini	ANCESTRAL SPECIES	15	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Simiiformes	ANCESTRAL SPECIES	14	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195
Catarrhini	ANCESTRAL SPECIES	17	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.w.a #13	ENSGT00390000016845 #14	ENSGT00860000136202	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a.b #18	ENSGT00940000155443 #19	ENSGT00910000147368	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195
Hominoidea	ANCESTRAL SPECIES	18	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.w.a #13	ENSGT00390000016845 #14	ENSGT00860000136202	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a.b #18	ENSGT00940000155443 #19	ENSGT00910000147368	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466.g #37	ENSGT00390000008195
Hominidae	ANCESTRAL SPECIES	19	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.w.a #13	ENSGT00390000016845 #14	ENSGT00860000136202	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a.b #18	ENSGT00940000155443 #19	ENSGT00910000147368	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466.g #37	ENSGT00390000008195
Orangutan	MODERN SPECIES	14	KCNF1 (ENSPPYG00000041457) #7	PDIA6 (ENSPPYG00000012651) #8	ATP6V1C2 (ENSPPYG00000012652) #9	NOL10 (ENSPPYG00000012653) #10	ODC1 (ENSPPYG00000012654) #11	HPCAL1 (ENSPPYG00000012655) #12	RRM2 (ENSPPYG00000012656) #13	CYS1 (ENSPPYG00000012657) #14	KLF11 (ENSPPYG00000012659) #15	GRHL1 (ENSPPYG00000012661) #16	TAF1B (ENSPPYG00000012662) #17	YWHAQ (ENSPPYG00000012663) #18	ADAM17 (ENSPPYG00000012664) #19	IAH1 (ENSPPYG00000012665) #20	CPSF3 (ENSPPYG00000012666) #21	ITGB1BP1 (ENSPPYG00000031588) #22	ASAP2 (ENSPPYG00000012668) #23	ENSPPYG00000037864 #24	MBOAT2 (ENSPPYG00000012669) #25	KIDINS220 (ENSPPYG00000012670) #26	ID2 (ENSPPYG00000012719) #27	ENSPPYG00000030180 #28	RNF144A (ENSPPYG00000012673) #29	RSAD2 (ENSPPYG00000012674) #30	CMPK2 (ENSPPYG00000012675) #31	SOX11 (ENSPPYG00000036338) #32	ENSPPYG00000012680 #33	ALLC (ENSPPYG00000012681) #34	COLEC11 (ENSPPYG00000012682) #35	RPS7 (ENSPPYG00000025872) #36	RNASEH1 (ENSPPYG00000025873) #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	18	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.w.a #13	ENSGT00390000016845 #14	ENSGT00860000136202	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a.b #18	ENSGT00940000155443 #19	ENSGT00910000147368	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464.o #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466.g #37	ENSGT00390000008195
Homo/Pan group	ANCESTRAL SPECIES	14	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.w.a #13	ENSGT00390000016845 #14	ENSGT00860000136202	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a.b #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464.o #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466.g #37	ENSGT00390000008195
Pan	ANCESTRAL SPECIES	17	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.w.a #13	ENSGT00390000016845 #14	ENSGT00860000136202	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a.b #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464.o #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b.x #36	ENSGT00390000003466.g #37	ENSGT00390000008195
Bonobo	MODERN SPECIES	14	KCNF1 (ENSPPAG00000042656) #7	PDIA6 (ENSPPAG00000028754) #8	ATP6V1C2 (ENSPPAG00000028894) #9	NOL10 (ENSPPAG00000010631) #10	ODC1 (ENSPPAG00000004476) #11	HPCAL1 (ENSPPAG00000032513) #12	RRM2 (ENSPPAG00000040070) #13	ENSPPAG00000010181	KLF11 (ENSPPAG00000030099) #15	GRHL1 (ENSPPAG00000030977) #16	TAF1B (ENSPPAG00000031684) #17	ENSPPAG00000043019 ##18	ADAM17 (ENSPPAG00000038185) #19	IAH1 (ENSPPAG00000033783) #20	CPSF3 (ENSPPAG00000042457) #21	ITGB1BP1 (ENSPPAG00000039328) #22	ASAP2 (ENSPPAG00000008883) #23	ENSPPAG00000043888	MBOAT2 (ENSPPAG00000043445) #25	KIDINS220 (ENSPPAG00000041858) #26	ID2 (ENSPPAG00000034410) #27	RNF144A (ENSPPAG00000037389) #29	RSAD2 (ENSPPAG00000039493) #30	ENSPPAG00000037362	ENSPPAG00000036968	ENSPPAG00000031455	DCDC2C (ENSPPAG00000035755) #33	ALLC (ENSPPAG00000043709) #34	COLEC11 (ENSPPAG00000038334) #35	RPS7 (ENSPPAG00000039898) #36	RNASEH1 (ENSPPAG00000034221) #37
Chimpanzee	MODERN SPECIES	14	PDIA6 (ENSPTRG00000011653) #8	ATP6V1C2 (ENSPTRG00000011652) #9	NOL10 (ENSPTRG00000011651) #10	ODC1 (ENSPTRG00000011650) #11	HPCAL1 (ENSPTRG00000011649) #12	RRM2 (ENSPTRG00000042985) #13	CYS1 (ENSPTRG00000030565) #14	ENSPTRG00000046195	KLF11 (ENSPTRG00000011645) #15	GRHL1 (ENSPTRG00000011643) #16	TAF1B (ENSPTRG00000011642) #17	YWHAQ (ENSPTRG00000011641) #18	ADAM17 (ENSPTRG00000011640) #19	IAH1 (ENSPTRG00000011639) #20	CPSF3 (ENSPTRG00000011638) #21	ITGB1BP1 (ENSPTRG00000011637) #22	ENSPTRG00000043418	ASAP2 (ENSPTRG00000011636) #23	MBOAT2 (ENSPTRG00000011634) #25	KIDINS220 (ENSPTRG00000011633) #26	ID2 (ENSPTRG00000011632) #27	RNF144A (ENSPTRG00000011630) #29	RSAD2 (ENSPTRG00000011629) #30	CMPK2 (ENSPTRG00000011627) #31	SOX11 (ENSPTRG00000045174) #32	DCDC2C (ENSPTRG00000033961) #33	ALLC (ENSPTRG00000011618) #34	COLEC11 (ENSPTRG00000011616) #35	RPS7 (ENSPTRG00000011615) #36	RNASEH1 (ENSPTRG00000011614) #37	ADI1 (ENSPTRG00000011624)
Human	MODERN SPECIES	11	KCNF1 (ENSG00000162975) #7	PDIA6 (ENSG00000143870) #8	ATP6V1C2 (ENSG00000143882) #9	NOL10 (ENSG00000115761) #10	ODC1 (ENSG00000115758) #11	HPCAL1 (ENSG00000115756) #12	RRM2 (ENSG00000171848) #13	CYS1 (ENSG00000205795) #14	KLF11 (ENSG00000172059) #15	GRHL1 (ENSG00000134317) #16	TAF1B (ENSG00000115750) #17	YWHAQ (ENSG00000134308) #18	ADAM17 (ENSG00000151694) #19	IAH1 (ENSG00000134330) #20	CPSF3 (ENSG00000119203) #21	ITGB1BP1 (ENSG00000119185) #22	ASAP2 (ENSG00000151693) #23	MBOAT2 (ENSG00000143797) #25	KIDINS220 (ENSG00000134313) #26	ID2 (ENSG00000115738) #27	RNF144A (ENSG00000151692) #29	RSAD2 (ENSG00000134321) #30	CMPK2 (ENSG00000134326) #31	SOX11 (ENSG00000176887) #32	DCDC2C (ENSG00000214866) #33	ALLC (ENSG00000151360) #34	COLEC11 (ENSG00000118004) #35	RPS7 (ENSG00000171863) #36	RNASEH1 (ENSG00000171865) #37	ADI1 (ENSG00000182551)	TRAPPC12 (ENSG00000171853)
Gorilla	MODERN SPECIES	14	PDIA6 (ENSGGOG00000002278) #8	ATP6V1C2 (ENSGGOG00000002273) #9	NOL10 (ENSGGOG00000034826) #10	ODC1 (ENSGGOG00000007991) #11	HPCAL1 (ENSGGOG00000007141) #12	RRM2 (ENSGGOG00000040108) #13	ENSGGOG00000027524	KLF11 (ENSGGOG00000012494) #15	GRHL1 (ENSGGOG00000002692) #16	TAF1B (ENSGGOG00000002685) #17	ENSGGOG00000001569 #18	ADAM17 (ENSGGOG00000013128) #19	ENSGGOG00000039328	IAH1 (ENSGGOG00000001760) #20	CPSF3 (ENSGGOG00000001757) #21	ITGB1BP1 (ENSGGOG00000001754) #22	ASAP2 (ENSGGOG00000001744) #23	MBOAT2 (ENSGGOG00000040459) #25	KIDINS220 (ENSGGOG00000009822) #26	ENSGGOG00000042851	ENSGGOG00000042490 #28	RNF144A (ENSGGOG00000039753) #29	RSAD2 (ENSGGOG00000010720) #30	ENSGGOG00000036393	ENSGGOG00000004066	SOX11 (ENSGGOG00000037622) #32	DCDC2C (ENSGGOG00000034923) #33	ALLC (ENSGGOG00000009821) #34	COLEC11 (ENSGGOG00000009819) #35	RPS7 (ENSGGOG00000023095) #36	RNASEH1 (ENSGGOG00000034822) #37
Gibbon	MODERN SPECIES	9	ATP6V1C2 (ENSNLEG00000013902) #9	NOL10 (ENSNLEG00000013851) #10	ODC1 (ENSNLEG00000013820) #11	HPCAL1 (ENSNLEG00000013802) #12	RRM2 (ENSNLEG00000035605) #13	ENSNLEG00000031728 #14	ENSNLEG00000031300	KLF11 (ENSNLEG00000013701) #15	GRHL1 (ENSNLEG00000013634) #16	TAF1B (ENSNLEG00000013577) #17	YWHAQ (ENSNLEG00000013534) #18	ENSNLEG00000034153	ADAM17 (ENSNLEG00000013455) #19	IAH1 (ENSNLEG00000013435) #20	CPSF3 (ENSNLEG00000013359) #21	ITGB1BP1 (ENSNLEG00000013322) #22	ENSNLEG00000032390	ASAP2 (ENSNLEG00000013248) #23	MBOAT2 (ENSNLEG00000013229) #25	KIDINS220 (ENSNLEG00000013206) #26	ID2 (ENSNLEG00000013192) #27	ENSNLEG00000035496	RNF144A (ENSNLEG00000015431) #29	RSAD2 (ENSNLEG00000015429) #30	ENSNLEG00000031381 #31	DCDC2C (ENSNLEG00000015424) #33	ALLC (ENSNLEG00000015418) #34	ENSNLEG00000031083 #35	RPS7 (ENSNLEG00000034280) #36	RNASEH1 (ENSNLEG00000015400) #37	ADI1 (ENSNLEG00000007518)
Cercopithecidae	ANCESTRAL SPECIES	18	ENSGT00910000147526	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.bb.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.w.a #13	ENSGT00390000016845 #14	ENSGT00860000136202	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a.b #18	ENSGT00940000155443 #19	ENSGT00910000147368	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00910000146975	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37
Cercopithecinae	ANCESTRAL SPECIES	17	ENSGT00910000147526	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.bb.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.w.a #13	ENSGT00390000016845 #14	ENSGT00860000136202	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a.b #18	ENSGT00940000155443 #19	ENSGT00910000147368	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00910000146975	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466.e #37
Vervet Monkey	MODERN SPECIES	5	PDIA6 (ENSCSAG00000007282) #8	ATP6V1C2 (ENSCSAG00000007259) #9	NOL10 (ENSCSAG00000007229) #10	ENSCSAG00000007220 #11	HPCAL1 (ENSCSAG00000007213) #12	RRM2 (ENSCSAG00000007201) #13	ENSCSAG00000007172	CYS1 (ENSCSAG00000007167) #14	KLF11 (ENSCSAG00000007163) #15	GRHL1 (ENSCSAG00000007158) #16	TAF1B (ENSCSAG00000007150) #17	ENSCSAG00000007145 ##18	ADAM17 (ENSCSAG00000007138) #19	IAH1 (ENSCSAG00000007130) #20	CPSF3 (ENSCSAG00000007125) #21	ITGB1BP1 (ENSCSAG00000007115) #22	ASAP2 (ENSCSAG00000007108) #23	MBOAT2 (ENSCSAG00000007093) #25	KIDINS220 (ENSCSAG00000007084) #26	ID2 (ENSCSAG00000007060) #27	RNF144A (ENSCSAG00000007058) #29	RSAD2 (ENSCSAG00000007051) #30	CMPK2 (ENSCSAG00000007040) #31	ENSCSAG00000007025	SOX11 (ENSCSAG00000000373) #32	DCDC2C (ENSCSAG00000007016) #33	ALLC (ENSCSAG00000006987) #34	COLEC11 (ENSCSAG00000006951) #35	RPS7 (ENSCSAG00000006946) #36	RNASEH1 (ENSCSAG00000006943) #37	ADI1 (ENSCSAG00000006938)
Cercopithecinae_a	ANCESTRAL SPECIES	17	ENSGT00950000182995.e.a.a.a.bb.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.x ##13	ENSGT00940000163505.b.b.b.b.b	ENSGT00390000013305.a.a.w.a #13	ENSGT00390000016845 #14	ENSGT00860000136202	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a.b #18	ENSGT00940000155443 #19	ENSGT00910000147368	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00910000146975	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000014122.i.b.a.a.b ##36
Macaca	ANCESTRAL SPECIES	17	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.bb.a #11	ENSGT00940000154645.A #12	ENSGT00940000163505.b.b.b.b.b	ENSGT00390000013305.a.a.w.a #13	ENSGT00390000016845 #14	ENSGT00860000136202	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a.b #18	ENSGT00940000155443 #19	ENSGT00910000147368	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00910000146975	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00390000014122.i.b.a.a.b ##36	ENSGT00940000159468 #35	ENSGT00390000014122.j ##36
Macaca_a	ANCESTRAL SPECIES	15	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.bb.a #11	ENSGT00940000154645.A #12	ENSGT00940000163505.b.b.b.b.b	ENSGT00390000013305.a.a.w.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a.b #18	ENSGT01090000260040.b.b.b.b.b ##18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00910000148182	ENSGT00940000154030.a.b #31	ENSGT01100000263493.a.b.b.a.b.a.a.a.b.a.a	ENSGT00940000170471.A.b.b.a.b.b	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466.e #37	ENSGT00390000008195
Crab-eating macaque	MODERN SPECIES	4	KCNF1 (ENSMFAG00000041973) #7	PDIA6 (ENSMFAG00000037618) #8	ATP6V1C2 (ENSMFAG00000032936) #9	NOL10 (ENSMFAG00000041289) #10	ENSMFAG00000038147 #11	HPCAL1 (ENSMFAG00000044146) #12	RRM2 (ENSMFAG00000040783) #13	ENSMFAG00000052007	KLF11 (ENSMFAG00000039490) #15	GRHL1 (ENSMFAG00000032356) #16	TAF1B (ENSMFAG00000041401) #17	ENSMFAG00000004741 ##18	ADAM17 (ENSMFAG00000039177) #19	IAH1 (ENSMFAG00000039055) #20	CPSF3 (ENSMFAG00000001339) #21	ITGB1BP1 (ENSMFAG00000045554) #22	ASAP2 (ENSMFAG00000037845) #23	MBOAT2 (ENSMFAG00000003741) #25	KIDINS220 (ENSMFAG00000031830) #26	ID2 (ENSMFAG00000000039) #27	ENSMFAG00000057704	RNF144A (ENSMFAG00000040034) #29	RSAD2 (ENSMFAG00000055130) #30	ENSMFAG00000049943	ENSMFAG00000048573	ENSMFAG00000060203	ENSMFAG00000049271	ENSMFAG00000057748	ENSMFAG00000061013	DCDC2C (ENSMFAG00000042487) #33	ENSMFAG00000042581 ##36
Pig-tailed macaque	MODERN SPECIES	127	ENSMNEG00000038801	NOL10 (ENSMNEG00000039685) #10	ODC1 (ENSMNEG00000043400) #11	HPCAL1 (ENSMNEG00000033423) #12	RRM2 (ENSMNEG00000028272) #13	CYS1 (ENSMNEG00000030186) #14	ENSMNEG00000018854	KLF11 (ENSMNEG00000034723) #15	GRHL1 (ENSMNEG00000030598) #16	TAF1B (ENSMNEG00000007382) #17	YWHAQ (ENSMNEG00000035884) #18	ADAM17 (ENSMNEG00000031025) #19	ENSMNEG00000039629	IAH1 (ENSMNEG00000038428) #20	CPSF3 (ENSMNEG00000039447) #21	ITGB1BP1 (ENSMNEG00000043390) #22	ASAP2 (ENSMNEG00000020414) #23	ENSMNEG00000042727	MBOAT2 (ENSMNEG00000036853) #25	KIDINS220 (ENSMNEG00000044570) #26	ID2 (ENSMNEG00000039277) #27	RNF144A (ENSMNEG00000030505) #29	RSAD2 (ENSMNEG00000040478) #30	CMPK2 (ENSMNEG00000018646) #31	ENSMNEG00000032217	SOX11 (ENSMNEG00000008816) #32
Cercopithecinae_b	ANCESTRAL SPECIES	15	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.bb.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.x ##13	ENSGT00940000163505.b.b.b.b.b	ENSGT00390000013305.a.a.w.a #13	ENSGT00390000016845 #14	ENSGT00860000136202	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a.b #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00910000146975	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000014122.i.b.a.a.b ##36
Olive baboon	MODERN SPECIES	5	PDIA6 (ENSPANG00000006258) #8	ATP6V1C2 (ENSPANG00000017189) #9	NOL10 (ENSPANG00000006259) #10	ENSPANG00000011223 #11	HPCAL1 (ENSPANG00000042769) #12	ENSPANG00000044848	RRM2 (ENSPANG00000018767) #13	CYS1 (ENSPANG00000005251) #14	ENSPANG00000031829	GRHL1 (ENSPANG00000020814) #16	TAF1B (ENSPANG00000013803) #17	YWHAQ (ENSPANG00000037411) #18	ADAM17 (ENSPANG00000000727) #19	IAH1 (ENSPANG00000009398) #20	CPSF3 (ENSPANG00000016798) #21	ITGB1BP1 (ENSPANG00000016797) #22	ASAP2 (ENSPANG00000023973) #23	MBOAT2 (ENSPANG00000022343) #25	KIDINS220 (ENSPANG00000021602) #26	ID2 (ENSPANG00000039736) #27	RNF144A (ENSPANG00000023570) #29	RSAD2 (ENSPANG00000026240) #30	CMPK2 (ENSPANG00000026237) #31	ENSPANG00000051199	SOX11 (ENSPANG00000041661) #32	DCDC2C (ENSPANG00000007153) #33	ALLC (ENSPANG00000017775) #34	COLEC11 (ENSPANG00000011091) #35	ENSPANG00000011092 ##36	RNASEH1 (ENSPANG00000000443) #37	ADI1 (ENSPANG00000021603)
Cercopithecinae_d	ANCESTRAL SPECIES	23	ENSGT00390000004263.b #9	ENSGT00910000147526	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.bb.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.x ##13	ENSGT00390000016845 #14	ENSGT00860000136202	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a.b #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00910000146975	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466.e #37
Sooty mangabey	MODERN SPECIES	121						ENSCATG00000031151 ##13	CYS1 (ENSCATG00000014723) #14	ENSCATG00000033874	KLF11 (ENSCATG00000037396) #15	GRHL1 (ENSCATG00000027324) #16	TAF1B (ENSCATG00000039789) #17	ENSCATG00000023335 #18	ADAM17 (ENSCATG00000037482) #19	IAH1 (ENSCATG00000029613) #20	CPSF3 (ENSCATG00000014770) #21	ITGB1BP1 (ENSCATG00000036040) #22	ASAP2 (ENSCATG00000035990) #23	ENSCATG00000011380	MBOAT2 (ENSCATG00000040596) #25	KIDINS220 (ENSCATG00000041275) #26	ID2 (ENSCATG00000030248) #27	RNF144A (ENSCATG00000033975) #29	RSAD2 (ENSCATG00000030147) #30	CMPK2 (ENSCATG00000040689) #31	ENSCATG00000018474	SOX11 (ENSCATG00000020144) #32	DCDC2C (ENSCATG00000025057) #33	ALLC (ENSCATG00000030695) #34	COLEC11 (ENSCATG00000029509) #35	RPS7 (ENSCATG00000029336) #36	ENSCATG00000016515 #37
Drill	MODERN SPECIES	1452	PDIA6 (ENSMLEG00000033930) #8	ATP6V1C2 (ENSMLEG00000028199) #9	ENSMLEG00000033772	NOL10 (ENSMLEG00000011854) #10	ODC1 (ENSMLEG00000039068) #11	HPCAL1 (ENSMLEG00000039247) #12	ENSMLEG00000035635 ##13	ENSMLEG00000042927	KLF11 (ENSMLEG00000036570) #15	GRHL1 (ENSMLEG00000036453) #16	TAF1B (ENSMLEG00000043999) #17	YWHAQ (ENSMLEG00000030005) #18	ADAM17 (ENSMLEG00000042175) #19	IAH1 (ENSMLEG00000044290) #20	CPSF3 (ENSMLEG00000026825) #21	ITGB1BP1 (ENSMLEG00000031967) #22	ASAP2 (ENSMLEG00000033183) #23	ENSMLEG00000040215	MBOAT2 (ENSMLEG00000037301) #25	KIDINS220 (ENSMLEG00000035601) #26	ID2 (ENSMLEG00000040695) #27
Rhinopithecus	DUPLICATION
Rhinopithecus	ANCESTRAL SPECIES	174	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00910000147526	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.bb.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.w.a #13	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a.b #18	ENSGT00940000155443 #19	ENSGT00910000147368	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.a #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27
Black snub-nosed monkey	MODERN SPECIES	147	PDIA6 (ENSRBIG00000031454) #8	ENSRBIG00000035043	ATP6V1C2 (ENSRBIG00000031961) #9	NOL10 (ENSRBIG00000043507) #10	ENSRBIG00000000544 #11	HPCAL1 (ENSRBIG00000034017) #12	RRM2 (ENSRBIG00000033258) #13	KLF11 (ENSRBIG00000037952) #15	GRHL1 (ENSRBIG00000024539) #16	TAF1B (ENSRBIG00000028101) #17	YWHAQ (ENSRBIG00000023381) #18	ENSRBIG00000023329	ADAM17 (ENSRBIG00000031143) #19	IAH1 (ENSRBIG00000029112) #20	CPSF3 (ENSRBIG00000041615) #21	ENSRBIG00000039204 #22	ENSRBIG00000034346	ASAP2 (ENSRBIG00000035134) #23	MBOAT2 (ENSRBIG00000035711) #25	KIDINS220 (ENSRBIG00000035069) #26	ID2 (ENSRBIG00000044689) #27
Golden snub-nosed monkey	MODERN SPECIES	2175	ATP6V1C2 (ENSRROG00000039206) #9	ENSRROG00000029320	NOL10 (ENSRROG00000043208) #10	ENSRROG00000045795 #11	HPCAL1 (ENSRROG00000033182) #12	RRM2 (ENSRROG00000041328) #13	KLF11 (ENSRROG00000041608) #15	GRHL1 (ENSRROG00000028348) #16	TAF1B (ENSRROG00000024712) #17	YWHAQ (ENSRROG00000044691) #18	ENSRROG00000025134	ADAM17 (ENSRROG00000038460) #19	ENSRROG00000036140	IAH1 (ENSRROG00000034099) #20	CPSF3 (ENSRROG00000033792) #21	ENSRROG00000044107 #22	ASAP2 (ENSRROG00000042260) #23	ENSRROG00000035274	ENSRROG00000033889	MBOAT2 (ENSRROG00000045314) #25	KIDINS220 (ENSRROG00000036660) #26	ID2 (ENSRROG00000004887) #27
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00390000003990.b #22
Black snub-nosed monkey	MODERN SPECIES	2117																ENSRBIG00000038860 #22
Golden snub-nosed monkey	MODERN SPECIES	2087																ENSRROG00000033358 #22
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	45	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.y.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT01090000260040.b.b.b.b.a.b.b ##18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.c #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195
Cebidae	ANCESTRAL SPECIES	40	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.y.a.b #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT01090000260040.b.b.b.b.a.b.b ##18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.c #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	5	KCNF1 (ENSCJAG00000022930) #7	PDIA6 (ENSCJAG00000006694) #8	ATP6V1C2 (ENSCJAG00000006660) #9	NOL10 (ENSCJAG00000006602) #10	ODC1 (ENSCJAG00000006576) #11	HPCAL1 (ENSCJAG00000041528) #12	ENSCJAG00000006533 #13	KLF11 (ENSCJAG00000046813) #15	GRHL1 (ENSCJAG00000006431) #16	TAF1B (ENSCJAG00000006420) #17	YWHAQ (ENSCJAG00000040849) ##18	ENSCJAG00000062528	ADAM17 (ENSCJAG00000006369) #19	IAH1 (ENSCJAG00000006360) #20	CPSF3 (ENSCJAG00000006276) #21	ENSCJAG00000006250 #22	ASAP2 (ENSCJAG00000006233) #23	MBOAT2 (ENSCJAG00000006207) #25	ENSCJAG00000053616	KIDINS220 (ENSCJAG00000006054) #26	ENSCJAG00000006037 #27	RNF144A (ENSCJAG00000010225) #29	RSAD2 (ENSCJAG00000010219) #30	CMPK2 (ENSCJAG00000085281) #31	SOX11 (ENSCJAG00000038240) #32	DCDC2C (ENSCJAG00000083758) #33	ENSCJAG00000078912	ENSCJAG00000065738	COLEC11 (ENSCJAG00000016457) #35	ENSCJAG00000016462 #36	RNASEH1 (ENSCJAG00000035450) #37
Marmoset	MODERN SPECIES		KLF12 (ENSCJAG00000021151)	KLF5 (ENSCJAG00000021146)	PIBF1 (ENSCJAG00000021133)	ENSCJAG00000074439	DIS3 (ENSCJAG00000021117)	BORA (ENSCJAG00000021112)	MZT1 (ENSCJAG00000079180)	ENSCJAG00000021107	ENSCJAG00000070126	ENSCJAG00000077790	DACH1 (ENSCJAG00000021093)	ENSCJAG00000070122	ENSCJAG00000081793	KLHL1 (ENSCJAG00000016532)	ENSCJAG00000079366	ENSCJAG00000021951 #22	ENSCJAG00000075923	ENSCJAG00000062136	PCDH9 (ENSCJAG00000016402)	ENSCJAG00000078739	ENSCJAG00000078229	ENSCJAG00000085595	ENSCJAG00000075877	PCDH20 (ENSCJAG00000016415)	ENSCJAG00000076988	TDRD3 (ENSCJAG00000003853)	ENSCJAG00000081668	ENSCJAG00000052430	DIAPH3 (ENSCJAG00000003729)	ENSCJAG00000056633	ENSCJAG00000073048
Cebidae_a	ANCESTRAL SPECIES	46	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.y.a.b #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT01090000260040.b.b.b.b.a.b.b ##18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.c #22	ENSGT00940000155623 #23	ENSGT00390000015789.c.b	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195
Bolivian squirrel monkey	MODERN SPECIES	63	C2orf50 (ENSSBOG00000027050)	KCNF1 (ENSSBOG00000032364) #7	PDIA6 (ENSSBOG00000016573) #8	ATP6V1C2 (ENSSBOG00000020727) #9	NOL10 (ENSSBOG00000025651) #10	ODC1 (ENSSBOG00000034688) #11	HPCAL1 (ENSSBOG00000026513) #12	ENSSBOG00000022360 #13	KLF11 (ENSSBOG00000018899) #15	GRHL1 (ENSSBOG00000011486) #16	TAF1B (ENSSBOG00000028943) #17	ENSSBOG00000033831 ##18	ADAM17 (ENSSBOG00000035331) #19	IAH1 (ENSSBOG00000019617) #20	CPSF3 (ENSSBOG00000027263) #21	ENSSBOG00000031545 #22	ASAP2 (ENSSBOG00000021237) #23	ENSSBOG00000029937	MBOAT2 (ENSSBOG00000034820) #25	KIDINS220 (ENSSBOG00000026153) #26	ID2 (ENSSBOG00000033610) #27	RNF144A (ENSSBOG00000019246) #29	RSAD2 (ENSSBOG00000024280) #30	ENSSBOG00000028588 #31	ENSSBOG00000029283
Capuchin	MODERN SPECIES	1	ATP6V1C2 (ENSCCAG00000034767) #9	NOL10 (ENSCCAG00000027373) #10	ODC1 (ENSCCAG00000021928) #11	HPCAL1 (ENSCCAG00000020323) #12	ENSCCAG00000009364 #13	CYS1 (ENSCCAG00000028829) #14	KLF11 (ENSCCAG00000026312) #15	GRHL1 (ENSCCAG00000022259) #16	TAF1B (ENSCCAG00000031135) #17	YWHAQ (ENSCCAG00000031746) #18	ENSCCAG00000001935	ADAM17 (ENSCCAG00000035481) #19	IAH1 (ENSCCAG00000034153) #20	ENSCCAG00000010701	CPSF3 (ENSCCAG00000036730) #21	ITGB1BP1 (ENSCCAG00000036127) #22	ASAP2 (ENSCCAG00000033861) #23	MBOAT2 (ENSCCAG00000028053) #25	KIDINS220 (ENSCCAG00000035619) #26	ID2 (ENSCCAG00000034943) #27
Mas night monkey	MODERN SPECIES	1339	KCNF1 (ENSANAG00000036777) #7	PDIA6 (ENSANAG00000012637) #8	ENSANAG00000027269 #9	NOL10 (ENSANAG00000024937) #10	ODC1 (ENSANAG00000036668) #11	HPCAL1 (ENSANAG00000033383) #12	ENSANAG00000025761 #13	KLF11 (ENSANAG00000028728) #15	GRHL1 (ENSANAG00000025191) #16	TAF1B (ENSANAG00000031526) #17	YWHAQ (ENSANAG00000026145) ##18	ADAM17 (ENSANAG00000037496) #19	ENSANAG00000022015	IAH1 (ENSANAG00000033141) #20	CPSF3 (ENSANAG00000031254) #21	ENSANAG00000034926 #22	ASAP2 (ENSANAG00000023907) #23	ENSANAG00000030828	MBOAT2 (ENSANAG00000037506) #25	KIDINS220 (ENSANAG00000038069) #26	ID2 (ENSANAG00000035588) #27
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00390000003990.d #22
Mas night monkey	MODERN SPECIES	1091	SLC10A7 (ENSANAG00000025194)	REELD1 (ENSANAG00000025603)	ENSANAG00000030568	ZNF827 (ENSANAG00000030225)	C4orf51 (ENSANAG00000025562)	MMAA (ENSANAG00000027872)	SMAD1 (ENSANAG00000035908)	OTUD4 (ENSANAG00000025997)	ENSANAG00000023180	ENSANAG00000033809	HHIP (ENSANAG00000029482)	ENSANAG00000030304	SMARCA5 (ENSANAG00000019345)	GAB1 (ENSANAG00000029852)	USP38 (ENSANAG00000027226)	ENSANAG00000022956 #22	ENSANAG00000022060	INPP4B (ENSANAG00000026584)	IL15 (ENSANAG00000022052)
Cebidae	ANCESTRAL SPECIES																	ENSGT00390000003990.d #22
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00390000003990.d #22
Bolivian squirrel monkey	MODERN SPECIES	46	CFAP210 (ENSSBOG00000034513)	PHOSPHO2 (ENSSBOG00000019196)	ENSSBOG00000022335	KLHL23 (ENSSBOG00000034226)	ENSSBOG00000027204	ENSSBOG00000018367	ENSSBOG00000030085	UBR3 (ENSSBOG00000030227)	MYO3B (ENSSBOG00000021362)	SP5 (ENSSBOG00000021173)	ENSSBOG00000026107	GAD1 (ENSSBOG00000025342)	ENSSBOG00000031679	GORASP2 (ENSSBOG00000029025)	TLK1 (ENSSBOG00000030529)	ENSSBOG00000024638 #22	ENSSBOG00000027578	METTL8 (ENSSBOG00000029503)	DCAF17 (ENSSBOG00000029035)	CYBRD1 (ENSSBOG00000030691)	DYNC1I2 (ENSSBOG00000028159)	SLC25A12 (ENSSBOG00000021566)	ENSSBOG00000035650	HAT1 (ENSSBOG00000027379)	METAP1D (ENSSBOG00000030256)	DLX1 (ENSSBOG00000018939)	DLX2 (ENSSBOG00000028830)	ENSSBOG00000035010	ITGA6 (ENSSBOG00000032166)	PDK1 (ENSSBOG00000019615)	RAPGEF4 (ENSSBOG00000031049)
Tarsier	MODERN SPECIES	6758												YWHAQ (ENSTSYG00000031132) #18	ADAM17 (ENSTSYG00000008904) #19	IAH1 (ENSTSYG00000026191) #20	CPSF3 (ENSTSYG00000002967) #21	ITGB1BP1 (ENSTSYG00000014537) #22	ASAP2 (ENSTSYG00000014529) #23	ENSTSYG00000028357
Strepsirrhini	ANCESTRAL SPECIES	13	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000173435	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195
Bushbaby	MODERN SPECIES	137	PDIA6 (ENSOGAG00000009751) #8	ATP6V1C2 (ENSOGAG00000009748) #9	NOL10 (ENSOGAG00000010494) #10	ENSOGAG00000033625	ENSOGAG00000001558 #11	HPCAL1 (ENSOGAG00000001557) #12	RRM2 (ENSOGAG00000007075) #13	ENSOGAG00000028490	KLF11 (ENSOGAG00000026035) #15	GRHL1 (ENSOGAG00000014342) #16	TAF1B (ENSOGAG00000014337) #17	YWHAQ (ENSOGAG00000000547) #18	ADAM17 (ENSOGAG00000000546) #19	IAH1 (ENSOGAG00000000544) #20	CPSF3 (ENSOGAG00000001680) #21	ITGB1BP1 (ENSOGAG00000001679) #22	ASAP2 (ENSOGAG00000001677) #23	ENSOGAG00000034773	ENSOGAG00000034565	MBOAT2 (ENSOGAG00000034475) #25	KIDINS220 (ENSOGAG00000012566) #26	ID2 (ENSOGAG00000012565) #27
Lemuriformes	DUPLICATION
Lemuriformes	DUPLICATION
Lemuriformes	ANCESTRAL SPECIES	23	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.e.a #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000173435	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195
Mouse lemur	MODERN SPECIES	30	ATP6V1C2 (ENSMICG00000017366) #9	NOL10 (ENSMICG00000004805) #10	ENSMICG00000012511 #11	HPCAL1 (ENSMICG00000029256) #12	ENSMICG00000012789 #13	CYS1 (ENSMICG00000027772) #14	KLF11 (ENSMICG00000012761) #15	GRHL1 (ENSMICG00000012737) #16	TAF1B (ENSMICG00000012714) #17	SLC66A3 (ENSMICG00000043387)	ENSMICG00000045104	YWHAQ (ENSMICG00000000973) #18	ADAM17 (ENSMICG00000002380) #19	IAH1 (ENSMICG00000002377) #20	CPSF3 (ENSMICG00000002363) #21	ITGB1BP1 (ENSMICG00000002359) #22	ASAP2 (ENSMICG00000002345) #23	MBOAT2 (ENSMICG00000010098) #25	KIDINS220 (ENSMICG00000010065) #26	ID2 (ENSMICG00000033026) #27	RNF144A (ENSMICG00000006187) #29	RSAD2 (ENSMICG00000000161) #30	CMPK2 (ENSMICG00000035731) #31	ENSMICG00000038260	SOX11 (ENSMICG00000026777) #32	ENSMICG00000041516	ENSMICG00000032327	DCDC2C (ENSMICG00000044531) #33	ALLC (ENSMICG00000016182) #34	COLEC11 (ENSMICG00000037566) #35	ENSMICG00000031923 ##36
Lemuriformes_a	ANCESTRAL SPECIES	10	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.e.a #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000173435	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195
Greater bamboo lemur	MODERN SPECIES	430			ENSPSMG00000019726	ENSPSMG00000019736	ODC1 (ENSPSMG00000019773) #11	HPCAL1 (ENSPSMG00000019803) #12	RRM2 (ENSPSMG00000019823) #13	CYS1 (ENSPSMG00000019836) #14	KLF11 (ENSPSMG00000019846) #15	GRHL1 (ENSPSMG00000019897) #16	TAF1B (ENSPSMG00000019984) #17	YWHAQ (ENSPSMG00000020036) #18	ADAM17 (ENSPSMG00000020083) #19	IAH1 (ENSPSMG00000020104) #20	CPSF3 (ENSPSMG00000020174) #21	ENSPSMG00000020223 #22	ASAP2 (ENSPSMG00000020266) #23	MBOAT2 (ENSPSMG00000020319) #25	KIDINS220 (ENSPSMG00000020495) #26	ID2 (ENSPSMG00000020546) #27	ENSPSMG00000020553	RNF144A (ENSPSMG00000020570) #29	CMPK2 (ENSPSMG00000020579) #31	SOX11 (ENSPSMG00000020583) #32	DCDC2C (ENSPSMG00000020594) #33	ALLC (ENSPSMG00000020625) #34
Coquerels sifaka	MODERN SPECIES	178											YWHAQ (ENSPCOG00000027184) #18	ENSPCOG00000023761	ADAM17 (ENSPCOG00000027775) #19	IAH1 (ENSPCOG00000023355) #20	CPSF3 (ENSPCOG00000023016) #21	ENSPCOG00000023364 #22	ASAP2 (ENSPCOG00000019755) #23	MBOAT2 (ENSPCOG00000009724) #25	ENSPCOG00000021299	KIDINS220 (ENSPCOG00000004733) #26	ID2 (ENSPCOG00000027288) #27	RNF144A (ENSPCOG00000022449) #29	RSAD2 (ENSPCOG00000009941) #30	CMPK2 (ENSPCOG00000026777) #31	SOX11 (ENSPCOG00000027861) #32
Lemuriformes	ANCESTRAL SPECIES																	ENSGT00390000003990.e.b #22
Lemuriformes_a	ANCESTRAL SPECIES	28	ENSGT00940000154347.b.a	ENSGT00940000157142	ENSGT00940000155362	ENSGT00940000156249	ENSGT00530000063770.c.b	ENSGT00390000004904	ENSGT00950000182982.C	ENSGT00390000001962	ENSGT00880000138038	ENSGT00390000000358	ENSGT00940000157815	ENSGT00390000010369	ENSGT00390000018131	ENSGT00510000047616.b	ENSGT00940000155141	ENSGT00390000003990.e.b #22	ENSGT00940000160636	ENSGT00390000009937	ENSGT00940000159202	ENSGT00730000111285
Coquerels sifaka	MODERN SPECIES	832	LAMA2 (ENSPCOG00000022643)	ENSPCOG00000019261	ENSPCOG00000028859	PTPRK (ENSPCOG00000023180)	THEMIS (ENSPCOG00000017268)	SOGA3 (ENSPCOG00000018924)	KIAA0408 (ENSPCOG00000020579)	ENSPCOG00000000724	ENSPCOG00000028126	RNF146 (ENSPCOG00000026745)	RSPO3 (ENSPCOG00000017894)	CENPW (ENSPCOG00000024755)	TRMT11 (ENSPCOG00000018890)	ENSPCOG00000022539	NCOA7 (ENSPCOG00000028675)	ENSPCOG00000023331 #22	HEY2 (ENSPCOG00000027958)	HDDC2 (ENSPCOG00000018777)	TPD52L1 (ENSPCOG00000023273)	RNF217 (ENSPCOG00000026159)
Greater bamboo lemur	MODERN SPECIES	54				C6orf58 (ENSPSMG00000004541)	SOGA3 (ENSPSMG00000004507)	KIAA0408 (ENSPSMG00000004489)	ENSPSMG00000004471	ENSPSMG00000004469	ECHDC1 (ENSPSMG00000004459)	RNF146 (ENSPSMG00000004420)	RSPO3 (ENSPSMG00000004402)	CENPW (ENSPSMG00000004389)	TRMT11 (ENSPSMG00000004362)	HINT3 (ENSPSMG00000004259)	NCOA7 (ENSPSMG00000004180)	ENSPSMG00000004033 #22	HEY2 (ENSPSMG00000004019)	HDDC2 (ENSPSMG00000004002)	TPD52L1 (ENSPSMG00000003919)	RNF217 (ENSPSMG00000003756)	ENSPSMG00000003751	NKAIN2 (ENSPSMG00000003740)	PATE2 (ENSPSMG00000003734)	PATE3 (ENSPSMG00000003725)	ENSPSMG00000003724
Lemuriformes	ANCESTRAL SPECIES																	ENSGT00390000003990.f #22
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	27	HIPK3 (ENSMICG00000038979)	KIAA1549L (ENSMICG00000012651)	C11orf91 (ENSMICG00000042497)	CD59 (ENSMICG00000037109)	FBXO3 (ENSMICG00000012713)	LMO2 (ENSMICG00000027826)	CAPRIN1 (ENSMICG00000003617)	NAT10 (ENSMICG00000003627)	ABTB2 (ENSMICG00000003665)	CAT (ENSMICG00000003672)	ELF5 (ENSMICG00000003689)	ENSMICG00000038699	EHF (ENSMICG00000003694)	APIP (ENSMICG00000003696)	PDHX (ENSMICG00000003700)	ENSMICG00000036406 #22	CD44 (ENSMICG00000003713)	SLC1A2 (ENSMICG00000003719)	PAMR1 (ENSMICG00000003733)	FJX1 (ENSMICG00000033879)	TRIM44 (ENSMICG00000008587)	LDLRAD3 (ENSMICG00000008590)	COMMD9 (ENSMICG00000008594)	PRR5L (ENSMICG00000047184)	TRAF6 (ENSMICG00000008604)	IFTAP (ENSMICG00000008620)	ENSMICG00000043108	LRRC4C (ENSMICG00000047157)	ENSMICG00000014581	TTC17 (ENSMICG00000014602)	HSD17B12 (ENSMICG00000014632)
Mouse lemur	MODERN SPECIES	28	LAMA2 (ENSMICG00000017693)	PTPRK (ENSMICG00000009882)	THEMIS (ENSMICG00000009877)	SOGA3 (ENSMICG00000026401)	KIAA0408 (ENSMICG00000035037)	ENSMICG00000015070	ENSMICG00000009308	RNF146 (ENSMICG00000036585)	RSPO3 (ENSMICG00000008084)	CENPW (ENSMICG00000004516)	ENSMICG00000047047	TRMT11 (ENSMICG00000029227)	HINT3 (ENSMICG00000029608)	ENSMICG00000043026	NCOA7 (ENSMICG00000014076)	ENSMICG00000041649 #22	HEY2 (ENSMICG00000033476)	ENSMICG00000014059	TPD52L1 (ENSMICG00000014048)	RNF217 (ENSMICG00000036781)	NKAIN2 (ENSMICG00000014034)	ENSMICG00000007255	CLVS2 (ENSMICG00000036266)	SMPDL3A (ENSMICG00000046662)	FABP7 (ENSMICG00000047291)	PKIB (ENSMICG00000043869)	SERINC1 (ENSMICG00000006427)	HSF2 (ENSMICG00000031761)	GJA1 (ENSMICG00000041650)	TBC1D32 (ENSMICG00000033229)	MAN1A1 (ENSMICG00000003859)
Euarchontoglires_A	ANCESTRAL SPECIES	14	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Tree shrew	MODERN SPECIES	2529										KLF11 (ENSTBEG00000008268) #15	GRHL1 (ENSTBEG00000007777) #16	TAF1B (ENSTBEG00000006430) #17	ENSTBEG00000006122 ##18	ADAM17 (ENSTBEG00000004343) #19	CPSF3 (ENSTBEG00000002707) #21	ITGB1BP1 (ENSTBEG00000001622) #22	ENSTBEG00000008035 #23
Glires	ANCESTRAL SPECIES	13	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Lagomorpha	ANCESTRAL SPECIES	233								ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.b ##18	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	536								KLF11 (ENSOCUG00000003809) #15	GRHL1 (ENSOCUG00000017717) #16	TAF1B (ENSOCUG00000005643) #17	ENSOCUG00000028159	CPSF3 (ENSOCUG00000003728) #21	YWHAQ (ENSOCUG00000010482) #18	ADAM17 (ENSOCUG00000010474) #19	IAH1 (ENSOCUG00000026669) #20	ENSOCUG00000003726 #22	ASAP2 (ENSOCUG00000003719) #23	MBOAT2 (ENSOCUG00000016985) #25	KIDINS220 (ENSOCUG00000003996) #26
Rabbit	MODERN SPECIES	20	ENSOCUG00000025657	SLC6A11 (ENSOCUG00000001627)	LZTFL1 (ENSOCUG00000010140)	SLC6A20 (ENSOCUG00000004216)	SACM1L (ENSOCUG00000026080)	LIMD1 (ENSOCUG00000001984)	ENSOCUG00000024922	LARS2 (ENSOCUG00000001964)	CDCP1 (ENSOCUG00000006910)	ENSOCUG00000036909	EXOSC7 (ENSOCUG00000000939)	ENSOCUG00000000937	TMEM42 (ENSOCUG00000000933)	KIF15 (ENSOCUG00000000930)	KIAA1143 (ENSOCUG00000000929)	ENSOCUG00000027570 #22	ZNF502 (ENSOCUG00000029010)	CCR9 (ENSOCUG00000008210)	FYCO1 (ENSOCUG00000004305)	CXCR6 (ENSOCUG00000004317)	XCR1 (ENSOCUG00000004322)	CCR1 (ENSOCUG00000003658)	ENSOCUG00000003660	ENSOCUG00000003665	ENSOCUG00000021929	LTF (ENSOCUG00000023796)	LRRC2 (ENSOCUG00000017236)	ENSOCUG00000004992	FAM240A (ENSOCUG00000030290)	ALS2CL (ENSOCUG00000012839)	TMIE (ENSOCUG00000007420)
Pika	MODERN SPECIES	2207										ENSOPRG00000009027 #16	TAF1B (ENSOPRG00000008998) #17	ENSOPRG00000008991 ##18	ADAM17 (ENSOPRG00000008960) #19	IAH1 (ENSOPRG00000008947) #20	CPSF3 (ENSOPRG00000008902) #21	ITGB1BP1 (ENSOPRG00000008887) #22	ENSOPRG00000008852 #23
Rodentia	ANCESTRAL SPECIES	15	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.v #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Rodentia_A	ANCESTRAL SPECIES	14	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.v #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Sciuridae	ANCESTRAL SPECIES	16	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.v.b #13	ENSGT00390000016845 #14	ENSGT00940000155982.b #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Marmotini	ANCESTRAL SPECIES	14	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.v.b #13	ENSGT00390000016845 #14	ENSGT00940000155982.b #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069.k.a #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Alpin marmot	MODERN SPECIES	6	KCNF1 (ENSMMMG00000022573) #7	PDIA6 (ENSMMMG00000022575) #8	ATP6V1C2 (ENSMMMG00000022583) #9	NOL10 (ENSMMMG00000022607) #10	ODC1 (ENSMMMG00000022615) #11	HPCAL1 (ENSMMMG00000022618) #12	ENSMMMG00000022624 #13	ENSMMMG00000022625 #14	KLF11 (ENSMMMG00000022629) #15	GRHL1 (ENSMMMG00000022631) #16	TAF1B (ENSMMMG00000022638) #17	YWHAQ (ENSMMMG00000022652) #18	ADAM17 (ENSMMMG00000022654) #19	IAH1 (ENSMMMG00000022658) #20	CPSF3 (ENSMMMG00000022663) #21	ITGB1BP1 (ENSMMMG00000022669) #22	ASAP2 (ENSMMMG00000022671) #23	MBOAT2 (ENSMMMG00000022735) #25	KIDINS220 (ENSMMMG00000022748) #26	ID2 (ENSMMMG00000022803) #27	RNF144A (ENSMMMG00000022809) #29	RSAD2 (ENSMMMG00000022810) #30	CMPK2 (ENSMMMG00000022812) #31	SOX11 (ENSMMMG00000022819) #32	ENSMMMG00000022822	DCDC2C (ENSMMMG00000022831) #33	ALLC (ENSMMMG00000022836) #34	COLEC11 (ENSMMMG00000022843) #35	RPS7 (ENSMMMG00000022853) #36	ENSMMMG00000022860	RNASEH1 (ENSMMMG00000022864) #37
Marmotini_b	ANCESTRAL SPECIES	17	ENSGT00940000154459.B	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.v.b #13	ENSGT00940000155982.b #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.b ##18	ENSGT00940000155443 #19	ENSGT00390000008069.k.a #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Squirrel	MODERN SPECIES	132	SLC66A3 (ENSSTOG00000027023)	C2orf50 (ENSSTOG00000002600)	PDIA6 (ENSSTOG00000005550) #8	ATP6V1C2 (ENSSTOG00000005527) #9	NOL10 (ENSSTOG00000005485) #10	ENSSTOG00000000386 #11	HPCAL1 (ENSSTOG00000001514) #12	ENSSTOG00000033669 #13	ENSSTOG00000030936 #15	GRHL1 (ENSSTOG00000019842) #16	TAF1B (ENSSTOG00000002419) #17	ENSSTOG00000024378 ##18	ADAM17 (ENSSTOG00000004510) #19	ENSSTOG00000004500 #20	CPSF3 (ENSSTOG00000004476) #21	ITGB1BP1 (ENSSTOG00000004464) #22	ASAP2 (ENSSTOG00000004398) #23	MBOAT2 (ENSSTOG00000020147) #25	KIDINS220 (ENSSTOG00000013232) #26	ID2 (ENSSTOG00000019401) #27	RNF144A (ENSSTOG00000027570) #29	RSAD2 (ENSSTOG00000006147) #30	CMPK2 (ENSSTOG00000019402) #31	DCDC2C (ENSSTOG00000020234) #33	ALLC (ENSSTOG00000002136) #34	COLEC11 (ENSSTOG00000020387) #35	RPS7 (ENSSTOG00000024830) #36	RNASEH1 (ENSSTOG00000012774) #37	ADI1 (ENSSTOG00000029152)	TRAPPC12 (ENSSTOG00000027157)	EIPR1 (ENSSTOG00000006844)
Arctic ground squirrel	MODERN SPECIES		C2orf50 (ENSUPAG00010011218)	KCNF1 (ENSUPAG00010011227) #7	PDIA6 (ENSUPAG00010011237) #8	ATP6V1C2 (ENSUPAG00010011265) #9	NOL10 (ENSUPAG00010011386) #10	ODC1 (ENSUPAG00010011416) #11	HPCAL1 (ENSUPAG00010011428) #12	CYS1 (ENSUPAG00010011444) #14	KLF11 (ENSUPAG00010011457) #15	GRHL1 (ENSUPAG00010011483) #16	TAF1B (ENSUPAG00010011508) #17	YWHAQ (ENSUPAG00010011534) ##18	ADAM17 (ENSUPAG00010011539) #19	ENSUPAG00010011577 #20	CPSF3 (ENSUPAG00010011610) #21	ITGB1BP1 (ENSUPAG00010011629) #22	ASAP2 (ENSUPAG00010011650) #23	MBOAT2 (ENSUPAG00010011957) #25	KIDINS220 (ENSUPAG00010012028) #26	ID2 (ENSUPAG00010012253) #27	RNF144A (ENSUPAG00010012263) #29	RSAD2 (ENSUPAG00010012305) #30	CMPK2 (ENSUPAG00010012310) #31	SOX11 (ENSUPAG00010012315) #32
Eurasian red squirrel	MODERN SPECIES	5	ATP6V1C2 (ENSSVLG00005018543) #9	ENSSVLG00005018931	NOL10 (ENSSVLG00005018977) #10	ENSSVLG00005019056 #11	HPCAL1 (ENSSVLG00005019176) #12	ENSSVLG00005019233 #13	CYS1 (ENSSVLG00005019295) #14	KLF11 (ENSSVLG00005019337) #15	ENSSVLG00005019438 #16	ENSSVLG00005019695 #17	ENSSVLG00005019881	YWHAQ (ENSSVLG00005019899) #18	ADAM17 (ENSSVLG00005019936) #19	IAH1 (ENSSVLG00005019997) #20	CPSF3 (ENSSVLG00005020098) #21	ITGB1BP1 (ENSSVLG00005020179) #22	ASAP2 (ENSSVLG00005020310) #23	MBOAT2 (ENSSVLG00005020748) #25	KIDINS220 (ENSSVLG00005020790) #26	ID2 (ENSSVLG00005020830) #27	RNF144A (ENSSVLG00005020868) #29	RSAD2 (ENSSVLG00005020911) #30	CMPK2 (ENSSVLG00005020981) #31	SOX11 (ENSSVLG00005021089) #32	DCDC2C (ENSSVLG00005021143) #33	ALLC (ENSSVLG00005021266) #34	COLEC11 (ENSSVLG00005021395) #35	ENSSVLG00005021713 ##36	RNASEH1 (ENSSVLG00005021750) #37	ADI1 (ENSSVLG00005021776)	TRAPPC12 (ENSSVLG00005021823)
Hystricomorpha	ANCESTRAL SPECIES	64	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.v #13	ENSGT00390000016845 #14	ENSGT00390000013305.a.a.u.a #13	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.b ##18	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23
Naked mole-rat female	MODERN SPECIES	19	NTSR2 (ENSHGLG00000048775)	LPIN1 (ENSHGLG00000000436)	TRIB2 (ENSHGLG00000050246)	ENSHGLG00000001922	ENSHGLG00000005931	LRATD1 (ENSHGLG00000004468)	ENSHGLG00000047840	NBAS (ENSHGLG00000000885)	ENSHGLG00000049886	ENSHGLG00000049295	ENSHGLG00000000328	ENSHGLG00000000473 #18	ADAM17 (ENSHGLG00000000502) #19	ENSHGLG00000000512 #20	CPSF3 (ENSHGLG00000000666) #21	ITGB1BP1 (ENSHGLG00000000877) #22	ENSHGLG00000000974 #23	ENSHGLG00000040434	ENSHGLG00000033649	ENSHGLG00000044591	ENSHGLG00000049015	ENSHGLG00000042745	ENSHGLG00000032848	ENSHGLG00000036700	ENSHGLG00000040838	ENSHGLG00000040330	ENSHGLG00000043794	ENSHGLG00000032201	ENSHGLG00000035478	ENSHGLG00000041769	ENSHGLG00000033911
Hystricomorpha_a	ANCESTRAL SPECIES	70	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.v #13	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.b ##18	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466 #37	ENSGT00390000014122.i.b.a.b #36	ENSGT00940000159468 #35	ENSGT00390000001793 #34	ENSGT00940000162396 #33	ENSGT00940000161652 #32	ENSGT00940000154030.a.b #31	ENSGT00390000013670 #30	ENSGT00940000157701 #29
Guinea pig	MODERN SPECIES	75										MYCN (ENSCPOG00000020263)	ENSCPOG00000012839	YWHAQ (ENSCPOG00000011321) #18	ADAM17 (ENSCPOG00000011313) #19	IAH1 (ENSCPOG00000011308) #20	CPSF3 (ENSCPOG00000011299) #21	ITGB1BP1 (ENSCPOG00000010293) #22	ASAP2 (ENSCPOG00000010278) #23	PXDN (ENSCPOG00000011199)	MYT1L (ENSCPOG00000013246)	EIPR1 (ENSCPOG00000005737)	TRAPPC12 (ENSCPOG00000005749)	ADI1 (ENSCPOG00000027219)	RNASEH1 (ENSCPOG00000022278) #37	RPS7 (ENSCPOG00000009795) #36	COLEC11 (ENSCPOG00000032858) #35	ALLC (ENSCPOG00000014255) #34	ENSCPOG00000022309 #33	SOX11 (ENSCPOG00000019507) #32	CMPK2 (ENSCPOG00000001105) #31	RSAD2 (ENSCPOG00000008107) #30	RNF144A (ENSCPOG00000030215) #29
Hystricomorpha_b	ANCESTRAL SPECIES	91	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.u.a #13	ENSGT00390000013305.a.a.v #13	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.b ##18	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00940000157666	ENSGT00940000155671	ENSGT00730000111137	ENSGT00390000002448	ENSGT00390000008195	ENSGT00390000003466 #37	ENSGT00390000014122.i.b.a.b #36	ENSGT00940000159468 #35	ENSGT00390000001793 #34	ENSGT00940000162396 #33	ENSGT00940000161652 #32	ENSGT00940000154030.a.b #31	ENSGT00390000013670 #30	ENSGT00940000157701 #29
Long-tailed chinchilla	MODERN SPECIES	194	KCNF1 (ENSCLAG00000017968) #7	PDIA6 (ENSCLAG00000006956) #8	ATP6V1C2 (ENSCLAG00000006612) #9	NOL10 (ENSCLAG00000002234) #10	ODC1 (ENSCLAG00000002140) #11	HPCAL1 (ENSCLAG00000002037) #12	ENSCLAG00000002025	RRM2 (ENSCLAG00000001926) #13	ENSCLAG00000004146 #15	GRHL1 (ENSCLAG00000004000) #16	TAF1B (ENSCLAG00000003776) #17	YWHAQ (ENSCLAG00000003576) ##18	ADAM17 (ENSCLAG00000003055) #19	IAH1 (ENSCLAG00000002879) #20	CPSF3 (ENSCLAG00000002727) #21	ITGB1BP1 (ENSCLAG00000002388) #22	ASAP2 (ENSCLAG00000001989) #23	PXDN (ENSCLAG00000001727)	MYT1L (ENSCLAG00000001644)	ENSCLAG00000001592	EIPR1 (ENSCLAG00000002535)	TRAPPC12 (ENSCLAG00000002486)	ADI1 (ENSCLAG00000002464)	RNASEH1 (ENSCLAG00000002440) #37	RPS7 (ENSCLAG00000002424) #36	COLEC11 (ENSCLAG00000002289) #35	ALLC (ENSCLAG00000002247) #34	DCDC2C (ENSCLAG00000002204) #33	SOX11 (ENSCLAG00000002180) #32	CMPK2 (ENSCLAG00000002165) #31	RSAD2 (ENSCLAG00000002145) #30
Degu	DUPLICATION
Degu	MODERN SPECIES	192	ENSODEG00000000975	ENSODEG00000000842 #8	ATP6V1C2 (ENSODEG00000000754) #9	NOL10 (ENSODEG00000000508) #10	ODC1 (ENSODEG00000000437) #11	ENSODEG00000002415 #12	RRM2 (ENSODEG00000002317) #13	ENSODEG00000002288 #15	GRHL1 (ENSODEG00000002151) #16	TAF1B (ENSODEG00000002052) #17	ENSODEG00000001535	YWHAQ (ENSODEG00000001504) #18	ADAM17 (ENSODEG00000003472) #19	IAH1 (ENSODEG00000003362) #20	CPSF3 (ENSODEG00000003129) #21	ENSODEG00000003101 #22	ENSODEG00000018909	ASAP2 (ENSODEG00000001497) #23	PXDN (ENSODEG00000001228)	ENSODEG00000018668	MYT1L (ENSODEG00000001544)
Degu	MODERN SPECIES	45	SNRPF (ENSODEG00000010328)	CCDC38 (ENSODEG00000010228)	AMDHD1 (ENSODEG00000009067)	HAL (ENSODEG00000008759)	LTA4H (ENSODEG00000010622)	ENSODEG00000012546	CDK17 (ENSODEG00000012390)	ENSODEG00000013382	ENSODEG00000011350	ENSODEG00000014444	NEDD1 (ENSODEG00000009573)	ENSODEG00000011590	ENSODEG00000012494	ENSODEG00000010263	ENSODEG00000019742	ENSODEG00000019648 #22	ENSODEG00000013377	SLC25A3 (ENSODEG00000009995)	ENSODEG00000010948	APAF1 (ENSODEG00000010122)	ENSODEG00000019813	ENSODEG00000010313	ENSODEG00000010573	ENSODEG00000010991	ENSODEG00000010669	ENSODEG00000011572	BLTP3B (ENSODEG00000010196)	ENSODEG00000010649	ENSODEG00000011114	SLC17A8 (ENSODEG00000010869)	NR1H4 (ENSODEG00000012027)
Rodentia_B	ANCESTRAL SPECIES	14	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.v #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Myomorpha	ANCESTRAL SPECIES	24	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.v #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Lesser Egyptian jerboa	MODERN SPECIES	74	Spred2 (ENSJJAG00000020977)	Meis1 (ENSJJAG00000015459)	ENSJJAG00000011226	ENSJJAG00000021064	ENSJJAG00000023186	Dnaaf10 (ENSJJAG00000019935)	Pno1 (ENSJJAG00000022862)	Ppp3r1 (ENSJJAG00000016869)	Cnrip1 (ENSJJAG00000016204)	Plek (ENSJJAG00000005757)	ENSJJAG00000011210	Ywhaq (ENSJJAG00000008194) #18	Adam17 (ENSJJAG00000020057) #19	Iah1 (ENSJJAG00000015466) #20	Cpsf3 (ENSJJAG00000023415) #21	Itgb1bp1 (ENSJJAG00000022716) #22	Asap2 (ENSJJAG00000001039) #23	Mboat2 (ENSJJAG00000011516) #25	Kidins220 (ENSJJAG00000015011) #26	Hnrnpll (ENSJJAG00000024192)	Galm (ENSJJAG00000023585)	ENSJJAG00000023079	Ttc39d (ENSJJAG00000012034)	Gemin6 (ENSJJAG00000021310)	ENSJJAG00000024348	Dhx57 (ENSJJAG00000023202)	ENSJJAG00000018800	Arhgef33 (ENSJJAG00000001327)	Sos1 (ENSJJAG00000013772)
Muroidea	ANCESTRAL SPECIES	21	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.v #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Upper Galilee mountains blind mole rat	MODERN SPECIES	1517	Atp6v1c2 (ENSNGAG00000000867) #9	Nol10 (ENSNGAG00000015506) #10	ENSNGAG00000019061	ENSNGAG00000001599 #11	Hpcal1 (ENSNGAG00000012465) #12	Rrm2 (ENSNGAG00000013008) #13	Cys1 (ENSNGAG00000015080) #14	Klf11 (ENSNGAG00000018758) #15	Grhl1 (ENSNGAG00000004562) #16	Taf1b (ENSNGAG00000010048) #17	ENSNGAG00000015636	Ywhaq (ENSNGAG00000012388) #18	Adam17 (ENSNGAG00000016571) #19	Iah1 (ENSNGAG00000017153) #20	Cpsf3 (ENSNGAG00000019836) #21	Itgb1bp1 (ENSNGAG00000015478) #22	Asap2 (ENSNGAG00000020450) #23	Mboat2 (ENSNGAG00000004975) #25	Kidins220 (ENSNGAG00000012753) #26	Id2 (ENSNGAG00000018053) #27	Rnf144a (ENSNGAG00000018727) #29	Rsad2 (ENSNGAG00000020530) #30	Cmpk2 (ENSNGAG00000020998) #31	Sox11 (ENSNGAG00000016772) #32	ENSNGAG00000017946	ENSNGAG00000002422 #33	Allc (ENSNGAG00000004596) #34	Colec11 (ENSNGAG00000014244) #35	Rps7 (ENSNGAG00000015037) #36	Rnaseh1 (ENSNGAG00000015966) #37	Adi1 (ENSNGAG00000019181)
Muroidea_A	ANCESTRAL SPECIES	24	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.v #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Cricetidae	ANCESTRAL SPECIES	24	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.v #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.g #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.v #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Chinese hamster chok1gshd	MODERN SPECIES	229	Kcnf1 (ENSCGRG00001014274) #7	Pdia6 (ENSCGRG00001017472) #8	Atp6v1c2 (ENSCGRG00001021615) #9	Nol10 (ENSCGRG00001009928) #10	ENSCGRG00001015979 #11	Hpcal1 (ENSCGRG00001023170) #12	Rrm2 (ENSCGRG00001007841) #13	Cys1 (ENSCGRG00001013951) #14	Klf11 (ENSCGRG00001018478) #15	Grhl1 (ENSCGRG00001024970) #16	ENSCGRG00001018516 #17	Ywhaq (ENSCGRG00001024724) #18	Adam17 (ENSCGRG00001024922) #19	Iah1 (ENSCGRG00001019624) #20	Cpsf3 (ENSCGRG00001013134) #21	Itgb1bp1 (ENSCGRG00001000664) #22	Asap2 (ENSCGRG00001022680) #23	Mboat2 (ENSCGRG00001015841) #25	Kidins220 (ENSCGRG00001016681) #26	Id2 (ENSCGRG00001023029) #27	ENSCGRG00001023880	Rnf144a (ENSCGRG00001007035) #29	Rsad2 (ENSCGRG00001014337) #30	Cmpk2 (ENSCGRG00001018716) #31	Sox11 (ENSCGRG00001007958) #32	ENSCGRG00001022074 #33	Allc (ENSCGRG00001009626) #34	Colec11 (ENSCGRG00001015605) #35	Rps7 (ENSCGRG00001017318) #36	Rnaseh1 (ENSCGRG00001008950) #37	Adi1 (ENSCGRG00001008870)
Golden Hamster	MODERN SPECIES	737									ENSMAUG00000016595 #13	Grhl1 (ENSMAUG00000013649) #16	Taf1b (ENSMAUG00000013477) #17	ENSMAUG00000017035 ##18	Adam17 (ENSMAUG00000015291) #19	Iah1 (ENSMAUG00000018865) #20	Cpsf3 (ENSMAUG00000000166) #21	Itgb1bp1 (ENSMAUG00000017998) #22	Asap2 (ENSMAUG00000001240) #23	Mboat2 (ENSMAUG00000005505) #25	Kidins220 (ENSMAUG00000011599) #26	Id2 (ENSMAUG00000012468) #27	Rnf144a (ENSMAUG00000014880) #29	Rsad2 (ENSMAUG00000008669) #30	Cmpk2 (ENSMAUG00000017501) #31	Sox11 (ENSMAUG00000016656) #32	ENSMAUG00000010849 #33	Allc (ENSMAUG00000015102) #34	Colec11 (ENSMAUG00000012547) #35	Rps7 (ENSMAUG00000012178) #36	Rnaseh1 (ENSMAUG00000014957) #37	Adi1 (ENSMAUG00000017657)	Trappc12 (ENSMAUG00000012942)
Cricetidae_B	ANCESTRAL SPECIES	43	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a.v #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Northern American deer mouse	MODERN SPECIES	14	ENSPEMG00000025861	Kcnf1 (ENSPEMG00000013250) #7	Pdia6 (ENSPEMG00000002821) #8	Atp6v1c2 (ENSPEMG00000007660) #9	Nol10 (ENSPEMG00000008676) #10	Hpcal1 (ENSPEMG00000025119) #12	Rrm2 (ENSPEMG00000010359) #13	Cys1 (ENSPEMG00000025881) #14	Klf11 (ENSPEMG00000011311) #15	Grhl1 (ENSPEMG00000012157) #16	Taf1b (ENSPEMG00000013642) #17	ENSPEMG00000027877 ##18	Adam17 (ENSPEMG00000015840) #19	Iah1 (ENSPEMG00000016641) #20	Cpsf3 (ENSPEMG00000017668) #21	Itgb1bp1 (ENSPEMG00000012447) #22	Asap2 (ENSPEMG00000016930) #23	Mboat2 (ENSPEMG00000000110) #25	Kidins220 (ENSPEMG00000002148) #26	Id2 (ENSPEMG00000006926) #27	Rnf144a (ENSPEMG00000008311) #29	Rsad2 (ENSPEMG00000008928) #30	Cmpk2 (ENSPEMG00000009342) #31	Sox11 (ENSPEMG00000014211) #32	ENSPEMG00000022353 #33	Allc (ENSPEMG00000022050) #34	Colec11 (ENSPEMG00000021365) #35	Rps7 (ENSPEMG00000011185) #36	Rnaseh1 (ENSPEMG00000022465) #37	Adi1 (ENSPEMG00000022007)	Trappc12 (ENSPEMG00000021832)
Prairie vole	MODERN SPECIES	93	Atp6v1c2 (ENSMOCG00000019580) #9	Nol10 (ENSMOCG00000021564) #10	ENSMOCG00000010314 #11	Hpcal1 (ENSMOCG00000014411) #12	ENSMOCG00000010909 #13	ENSMOCG00000018114 #13	Cys1 (ENSMOCG00000017656) #14	ENSMOCG00000014995 #15	ENSMOCG00000003070	Grhl1 (ENSMOCG00000019210) #16	Taf1b (ENSMOCG00000005916) #17	Ywhaq (ENSMOCG00000020316) #18	Adam17 (ENSMOCG00000010700) #19	Iah1 (ENSMOCG00000017872) #20	Cpsf3 (ENSMOCG00000020067) #21	Itgb1bp1 (ENSMOCG00000017072) #22	Asap2 (ENSMOCG00000019749) #23	Mboat2 (ENSMOCG00000021674) #25	Kidins220 (ENSMOCG00000011232) #26	Id2 (ENSMOCG00000002908) #27	ENSMOCG00000012398	Rnf144a (ENSMOCG00000000314) #29	ENSMOCG00000020673 #30	Cmpk2 (ENSMOCG00000000423) #31
Murinae	ANCESTRAL SPECIES	8	ENSGT00940000154030.a.b #31	ENSGT00390000013670 #30	ENSGT00940000157701 #29	ENSGT00940000156464 #27	ENSGT00940000156714 #26	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000013305.a.a.v #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01060000248676	ENSGT00940000154645.A #12	ENSGT00950000182995.e.a.a.a #11	ENSGT00390000007900 #10	ENSGT00390000004263.b #9	ENSGT00940000155646 #8	ENSGT00940000160213 #7	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.D	ENSGT00940000155734	ENSGT00390000008041.C	ENSGT01100000263518.A.a.a.b	ENSGT00940000157219
Mus	ANCESTRAL SPECIES	10	ENSGT00940000154030.a.b #31	ENSGT00390000013670 #30	ENSGT00940000157701 #29	ENSGT00940000156464 #27	ENSGT00940000156714 #26	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000013305.a.a.v #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01060000248676	ENSGT00950000182995.e.a.a.a #11	ENSGT00390000007900 #10	ENSGT00390000004263.b #9	ENSGT00940000155646 #8	ENSGT00940000160213 #7	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.D	ENSGT00940000155734	ENSGT00390000008041.C	ENSGT01100000263518.A.a.a.b	ENSGT00940000157219	ENSGT00950000182986.a.b.a
Mus_A	ANCESTRAL SPECIES	17	ENSGT00940000154030.a.b #31	ENSGT00390000013670 #30	ENSGT00940000157701 #29	ENSGT00940000156464 #27	ENSGT00940000156714 #26	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000013305.a.a.v #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01060000248676	ENSGT00950000182995.e.a.a.a.e #11	ENSGT00390000007900 #10	ENSGT00390000004263.b #9	ENSGT00940000155646 #8	ENSGT00940000160213 #7	ENSGT00940000154459.B	ENSGT00940000153916.B.c	ENSGT01030000234517.D	ENSGT00940000155734	ENSGT00390000008041.C	ENSGT01100000263518.A.a.a.b	ENSGT00940000157219	ENSGT00950000182986.a.b.a
Mus_B	ANCESTRAL SPECIES	17	ENSGT00940000154030.a.b #31	ENSGT00390000013670 #30	ENSGT00940000157701 #29	ENSGT00940000156464 #27	ENSGT00940000156714 #26	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000013305.a.a.v #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01060000248676	ENSGT00940000154645.A #12	ENSGT00950000182995.e.a.a.a.e #11	ENSGT00390000007900 #10	ENSGT00390000004263.b #9	ENSGT00940000155646 #8	ENSGT00940000160213 #7	ENSGT00940000154459.B	ENSGT00940000153916.B.c	ENSGT01030000234517.D	ENSGT00940000155734	ENSGT00390000008041.C	ENSGT01100000263518.A.a.a.b	ENSGT00940000157219
Mus_C	ANCESTRAL SPECIES	11	ENSGT00940000154030.a.b #31	ENSGT00390000013670 #30	ENSGT00940000157701 #29	ENSGT00940000156464 #27	ENSGT00940000156714 #26	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00390000013305.a.a.v #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00940000154645.A #12	ENSGT00950000182995.e.a.a.a.e #11	ENSGT00390000007900 #10	ENSGT00390000004263.b #9	ENSGT00940000155646 #8	ENSGT00940000160213 #7	ENSGT00940000154459.B	ENSGT00940000153916.B.c	ENSGT01030000234517.D	ENSGT00940000155734	ENSGT00390000008041.C	ENSGT01100000263518.A.a.a.b	ENSGT00940000157219	ENSGT00950000182986.a.b.a
Steppe mouse	MODERN SPECIES	2460												Ywhaq (ENSMSIG00000022246) #18	Adam17 (ENSMSIG00000022289) #19	Iah1 (ENSMSIG00000022381) #20	Cpsf3 (ENSMSIG00000022405) #21	Itgb1bp1 (ENSMSIG00000022470) #22	Asap2 (ENSMSIG00000022503) #23
spretus	MODERN SPECIES	3	Rsad2 (MGP_SPRETEiJ_G0018495) #30	Rnf144a (MGP_SPRETEiJ_G0018494) #29	MGP_SPRETEiJ_G0018493 #27	Kidins220 (MGP_SPRETEiJ_G0018492) #26	Mboat2 (MGP_SPRETEiJ_G0018491) #25	Rrm2 (MGP_SPRETEiJ_G0018490) #13	Cys1 (MGP_SPRETEiJ_G0018489) #14	Klf11 (MGP_SPRETEiJ_G0018488) #15	Grhl1 (MGP_SPRETEiJ_G0018487) #16	MGP_SPRETEiJ_G0018486	Taf1b (MGP_SPRETEiJ_G0018485) #17	Ywhaq (MGP_SPRETEiJ_G0018484) #18	Adam17 (MGP_SPRETEiJ_G0018483) #19	Iah1 (MGP_SPRETEiJ_G0018482) #20	Cpsf3 (MGP_SPRETEiJ_G0018481) #21	Itgb1bp1 (MGP_SPRETEiJ_G0018480) #22	Asap2 (MGP_SPRETEiJ_G0018479) #23	Nol10 (MGP_SPRETEiJ_G0018478) #10	Atp6v1c2 (MGP_SPRETEiJ_G0018477) #9	Pdia6 (MGP_SPRETEiJ_G0018476) #8	Kcnf1 (MGP_SPRETEiJ_G0018475) #7	2410004P03Rik (MGP_SPRETEiJ_G0018474)	MGP_SPRETEiJ_G0018473	Rock2 (MGP_SPRETEiJ_G0018472)	E2f6 (MGP_SPRETEiJ_G0018471)	Greb1 (MGP_SPRETEiJ_G0018470)	Ntsr2 (MGP_SPRETEiJ_G0018469)	Lpin1 (MGP_SPRETEiJ_G0018468)	Trib2 (MGP_SPRETEiJ_G0018467)	Lratd1 (MGP_SPRETEiJ_G0018466)	Nbas (MGP_SPRETEiJ_G0018465)
Mouse	MODERN SPECIES	3	Rsad2 (ENSMUSG00000020641) #30	Rnf144a (ENSMUSG00000020642) #29	Id2 (ENSMUSG00000020644) #27	Kidins220 (ENSMUSG00000036333) #26	Mboat2 (ENSMUSG00000020646) #25	Rrm2 (ENSMUSG00000020649) #13	Cys1 (ENSMUSG00000062563) #14	Klf11 (ENSMUSG00000020653) #15	Grhl1 (ENSMUSG00000020656) #16	Taf1b (ENSMUSG00000059669) #17	9030624G23Rik (ENSMUSG00000073158)	Ywhaq (ENSMUSG00000076432) #18	Adam17 (ENSMUSG00000052593) #19	Iah1 (ENSMUSG00000062054) #20	Cpsf3 (ENSMUSG00000054309) #21	Itgb1bp1 (ENSMUSG00000062352) #22	Asap2 (ENSMUSG00000052632) #23	Gm21863 (ENSMUSG00000095470)	5730507C01Rik (ENSMUSG00000073197)	Hpcal1 (ENSMUSG00000071379) #12	Odc1 (ENSMUSG00000011179) #11	Nol10 (ENSMUSG00000061458) #10	Atp6v1c2 (ENSMUSG00000020566) #9	Pdia6 (ENSMUSG00000020571) #8	Kcnf1 (ENSMUSG00000051726) #7	2410004P03Rik (ENSMUSG00000071398)	Pqlc3 (ENSMUSG00000045679)	Rock2 (ENSMUSG00000020580)	E2f6 (ENSMUSG00000057469)	Greb1 (ENSMUSG00000036523)	Ntsr2 (ENSMUSG00000020591)
Ryukyu mouse	MODERN SPECIES	3	Cmpk2 (MGP_CAROLIEiJ_G0017654) #31	Rsad2 (MGP_CAROLIEiJ_G0017653) #30	Rnf144a (MGP_CAROLIEiJ_G0017652) #29	MGP_CAROLIEiJ_G0017651 #27	Kidins220 (MGP_CAROLIEiJ_G0017650) #26	Mboat2 (MGP_CAROLIEiJ_G0017649) #25	Rrm2 (MGP_CAROLIEiJ_G0017648) #13	Cys1 (MGP_CAROLIEiJ_G0017647) #14	Klf11 (MGP_CAROLIEiJ_G0017646) #15	Grhl1 (MGP_CAROLIEiJ_G0017645) #16	Taf1b (MGP_CAROLIEiJ_G0017644) #17	Ywhaq (MGP_CAROLIEiJ_G0017643) #18	Adam17 (MGP_CAROLIEiJ_G0017642) #19	Iah1 (MGP_CAROLIEiJ_G0017641) #20	Cpsf3 (MGP_CAROLIEiJ_G0017640) #21	Itgb1bp1 (MGP_CAROLIEiJ_G0017639) #22	Asap2 (MGP_CAROLIEiJ_G0017638) #23	Odc1 (MGP_CAROLIEiJ_G0017637) #11	Nol10 (MGP_CAROLIEiJ_G0017636) #10	Atp6v1c2 (MGP_CAROLIEiJ_G0017635) #9	Pdia6 (MGP_CAROLIEiJ_G0017634) #8	Kcnf1 (MGP_CAROLIEiJ_G0017633) #7	MGP_CAROLIEiJ_G0017632	MGP_CAROLIEiJ_G0017631	Rock2 (MGP_CAROLIEiJ_G0017630)	MGP_CAROLIEiJ_G0017629	Greb1 (MGP_CAROLIEiJ_G0017628)	Ntsr2 (MGP_CAROLIEiJ_G0017627)	Lpin1 (MGP_CAROLIEiJ_G0017626)	Trib2 (MGP_CAROLIEiJ_G0017625)	Lratd1 (MGP_CAROLIEiJ_G0017624)
Shrew mouse	MODERN SPECIES	20	Cmpk2 (MGP_PahariEiJ_G0029412) #31	Rsad2 (MGP_PahariEiJ_G0029411) #30	Rnf144a (MGP_PahariEiJ_G0029410) #29	MGP_PahariEiJ_G0029409 #27	Kidins220 (MGP_PahariEiJ_G0029408) #26	Mboat2 (MGP_PahariEiJ_G0029407) #25	MGP_PahariEiJ_G0029405 #13	Cys1 (MGP_PahariEiJ_G0029404) #14	Klf11 (MGP_PahariEiJ_G0029403) #15	MGP_PahariEiJ_G0029402 #16	MGP_PahariEiJ_G0029401 #17	MGP_PahariEiJ_G0029400 #18	Adam17 (MGP_PahariEiJ_G0029399) #19	Iah1 (MGP_PahariEiJ_G0029398) #20	Cpsf3 (MGP_PahariEiJ_G0029397) #21	Itgb1bp1 (MGP_PahariEiJ_G0029396) #22	Asap2 (MGP_PahariEiJ_G0029395) #23	Odc1 (MGP_PahariEiJ_G0029394) #11	Nol10 (MGP_PahariEiJ_G0029393) #10	Atp6v1c2 (MGP_PahariEiJ_G0029392) #9	Pdia6 (MGP_PahariEiJ_G0029391) #8	Kcnf1 (MGP_PahariEiJ_G0029390) #7	MGP_PahariEiJ_G0029389	Pqlc3 (MGP_PahariEiJ_G0029388)	Rock2 (MGP_PahariEiJ_G0029387)	MGP_PahariEiJ_G0029386	E2f6 (MGP_PahariEiJ_G0029385)	Greb1 (MGP_PahariEiJ_G0029384)	MGP_PahariEiJ_G0029383	Lpin1 (MGP_PahariEiJ_G0029382)	Trib2 (MGP_PahariEiJ_G0029381)
Rat	MODERN SPECIES	16	Rnf144a (ENSRNOG00000007370) #29	Id2 (ENSRNOG00000007237) #27	LOC120093241 (ENSRNOG00000062523)	Kidins220 (ENSRNOG00000023176) #26	Mboat2 (ENSRNOG00000061050) #25	Rrm2 (ENSRNOG00000054286) #13	Cys1 (ENSRNOG00000058891) #14	Klf11 (ENSRNOG00000054259) #15	Grhl1 (ENSRNOG00000054989) #16	Rbm34-ps1 (ENSRNOG00000065550)	Taf1b (ENSRNOG00000061415) #17	Ywhaq (ENSRNOG00000051650) #18	Adam17 (ENSRNOG00000060694) #19	Iah1 (ENSRNOG00000060853) #20	Cpsf3 (ENSRNOG00000052418) #21	Itgb1bp1 (ENSRNOG00000059402) #22	Asap2 (ENSRNOG00000061519) #23	Hpcal1 (ENSRNOG00000005492) #12	LOC120093238 (ENSRNOG00000032523)	Odc1 (ENSRNOG00000005424) #11	AABR07063703.1 (ENSRNOG00000046279)	Nol10 (ENSRNOG00000005344) #10	Atp6v1c2 (ENSRNOG00000050553) #9	Pdia6 (ENSRNOG00000050197) #8	Kcnf1 (ENSRNOG00000024310) #7	C6h2orf50 (ENSRNOG00000024338)	Slc66a3 (ENSRNOG00000005126)	Rock2 (ENSRNOG00000004496)	E2f6 (ENSRNOG00000004449)	Greb1 (ENSRNOG00000024651)	Ntsr2 (ENSRNOG00000049054)
Kangaroo rat	MODERN SPECIES	339	ENSDORG00000027660	Kcnf1 (ENSDORG00000026132) #7	Pdia6 (ENSDORG00000003594) #8	Atp6v1c2 (ENSDORG00000003593) #9	Nol10 (ENSDORG00000001331) #10	Odc1 (ENSDORG00000002669) #11	Hpcal1 (ENSDORG00000007055) #12	Rrm2 (ENSDORG00000002514) #13	ENSDORG00000024620 #15	ENSDORG00000024766 #16	ENSDORG00000028599 #16	Taf1b (ENSDORG00000010154) #17	ENSDORG00000028741 ##18	Adam17 (ENSDORG00000014267) #19	Cpsf3 (ENSDORG00000014263) #21	Itgb1bp1 (ENSDORG00000014262) #22	Asap2 (ENSDORG00000014261) #23	Mboat2 (ENSDORG00000007348) #25	Kidins220 (ENSDORG00000014817) #26	Id2 (ENSDORG00000014815) #27	Rnf144a (ENSDORG00000010145) #29	Rsad2 (ENSDORG00000008537) #30
Laurasiatheria	ANCESTRAL SPECIES	13	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Laurasiatheria_a	ANCESTRAL SPECIES	17	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Artiodactyla	ANCESTRAL SPECIES	16	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Artiodactyla_a	DUPLICATION
Artiodactyla_a	ANCESTRAL SPECIES	15	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.k #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Camelidae	ANCESTRAL SPECIES	12	ENSGT00940000153916.B	ENSGT00940000154459.B	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.k #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000002448	ENSGT00730000111137	ENSGT00940000155671	ENSGT00940000157666
Arabian camel	MODERN SPECIES	6	C2orf50 (ENSCDRG00005003354)	PDIA6 (ENSCDRG00005021479) #8	ATP6V1C2 (ENSCDRG00005021467) #9	NOL10 (ENSCDRG00005021454) #10	ODC1 (ENSCDRG00005021445) #11	HPCAL1 (ENSCDRG00005021441) #12	RRM2 (ENSCDRG00005021436) #13	KLF11 (ENSCDRG00005021426) #15	GRHL1 (ENSCDRG00005021421) #16	TAF1B (ENSCDRG00005021414) #17	ENSCDRG00005021412	YWHAQ (ENSCDRG00005021407) #18	ADAM17 (ENSCDRG00005021400) #19	IAH1 (ENSCDRG00005021394) #20	CPSF3 (ENSCDRG00005021386) #21	ITGB1BP1 (ENSCDRG00005021375) #22	ASAP2 (ENSCDRG00005016761) #23	MBOAT2 (ENSCDRG00005016283) #25	KIDINS220 (ENSCDRG00005015440) #26	ID2 (ENSCDRG00005015367) #27	RNF144A (ENSCDRG00005015339) #29	RSAD2 (ENSCDRG00005015263) #30	CMPK2 (ENSCDRG00005015247) #31	ALLC (ENSCDRG00005014851) #34	COLEC11 (ENSCDRG00005014714) #35	ENSCDRG00005014654 #36	ADI1 (ENSCDRG00005014498) #37	TRAPPC12 (ENSCDRG00005014434)	EIPR1 (ENSCDRG00005014386)	ENSCDRG00005014339	ENSCDRG00005014272
Artiodactyla_b	ANCESTRAL SPECIES	14	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.k #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Pecora	ANCESTRAL SPECIES	5	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.fb.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.k #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00950000182858.B.a.d	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.b.a	ENSGT00940000155853	ENSGT00940000156689	ENSGT00390000008938	ENSGT00390000018089
Percora_a	ANCESTRAL SPECIES	13	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.fb.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.k #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00990000204082	ENSGT00950000182858.B.a.d	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.b.a	ENSGT00940000155853	ENSGT00940000156689	ENSGT00390000008938	ENSGT00390000018089	ENSGT00940000156868
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	238	PDIA6 (ENSMMSG00000001421) #8	ENSMMSG00000001405	ATP6V1C2 (ENSMMSG00000001335) #9	NOL10 (ENSMMSG00000001168) #10	ENSMMSG00000001108 #11	HPCAL1 (ENSMMSG00000001078) #12	ENSMMSG00000001037 #13	CYS1 (ENSMMSG00000001021) #14	KLF11 (ENSMMSG00000001004) #15	GRHL1 (ENSMMSG00000000910) #16	TAF1B (ENSMMSG00000000824) #17	YWHAQ (ENSMMSG00000000770) #18	ADAM17 (ENSMMSG00000000759) #19	ENSMMSG00000000723 #20	CPSF3 (ENSMMSG00000000621) #21	ENSMMSG00000000578 #22	ASAP2 (ENSMMSG00000000274) #23	MBOAT2 (ENSMMSG00000003927) #25	KIDINS220 (ENSMMSG00000003882) #26	ID2 (ENSMMSG00000003856) #27	RNF144A (ENSMMSG00000003832) #29	RSAD2 (ENSMMSG00000003822) #30	CMPK2 (ENSMMSG00000003809) #31	ENSMMSG00000003776	ENSMMSG00000003765	ENSMMSG00000003739	ENSMMSG00000003726	DAB2IP (ENSMMSG00000003463)	TTLL11 (ENSMMSG00000003370)	NDUFA8 (ENSMMSG00000003353)	MORN5 (ENSMMSG00000003337)
Siberian musk deer	MODERN SPECIES	18	ZC3H13 (ENSMMSG00000013066)	CPB2 (ENSMMSG00000013091)	ENSMMSG00000013171	LRRC63 (ENSMMSG00000013232)	RUBCNL (ENSMMSG00000013269)	LRCH1 (ENSMMSG00000013375)	ENSMMSG00000013450	HTR2A (ENSMMSG00000013507)	SUCLA2 (ENSMMSG00000013529)	ENSMMSG00000013552	MED4 (ENSMMSG00000013569)	ITM2B (ENSMMSG00000013606)	RB1 (ENSMMSG00000013661)	LPAR6 (ENSMMSG00000013747)	RCBTB2 (ENSMMSG00000013770)	ENSMMSG00000013837 #22	ENSMMSG00000013845	FNDC3A (ENSMMSG00000013859)	MLNR (ENSMMSG00000013954)	CDADC1 (ENSMMSG00000013980)	CAB39L (ENSMMSG00000014014)	SETDB2 (ENSMMSG00000014076)	ENSMMSG00000014134	RCBTB1 (ENSMMSG00000014208)	ARL11 (ENSMMSG00000014242)	EBPL (ENSMMSG00000014258)	KPNA3 (ENSMMSG00000014287)	SPRYD7 (ENSMMSG00000014349)	TRIM13 (ENSMMSG00000014380)	KCNRG (ENSMMSG00000014388)	RNASEH2B (ENSMMSG00000014495)
Bovidae	ANCESTRAL SPECIES	5	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.fb.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.k #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00950000182858.B.a.d	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.b.a	ENSGT00940000155853	ENSGT00940000156689	ENSGT00390000008938	ENSGT00390000018089
Bovinae	ANCESTRAL SPECIES	4	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.fb.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.k #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00990000204082	ENSGT00950000182858.B.a.d	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.b.a.e	ENSGT00940000155853	ENSGT00940000156689	ENSGT00390000008938	ENSGT00390000018089	ENSGT00940000156868
Bos	ANCESTRAL SPECIES	5	ENSGT00390000004263.b #9	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.a.a.a.a.a.a	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.fb.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT01090000260040.b.b.b.b.b ##18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.k #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00990000204082	ENSGT00950000182858.B.a.d	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.b.a.e	ENSGT00940000155853	ENSGT00940000156689	ENSGT00390000008938	ENSGT00390000018089	ENSGT00940000156868
Bos_a	ANCESTRAL SPECIES	6	ENSGT00390000004263.b #9	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.a.a.a.a.a.a	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.fb.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.k #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32
Domestic yak	MODERN SPECIES	28	ENSBGRG00000010565	ENSBGRG00000010591 #11	HPCAL1 (ENSBGRG00000010770) #12	RRM2 (ENSBGRG00000010858) #13	CYS1 (ENSBGRG00000011167) #14	KLF11 (ENSBGRG00000011215) #15	ENSBGRG00000011303	GRHL1 (ENSBGRG00000011381) #16	TAF1B (ENSBGRG00000012581) #17	ENSBGRG00000012787	ENSBGRG00000012819 ##18	YWHAQ (ENSBGRG00000012872) #18	ADAM17 (ENSBGRG00000012923) #19	IAH1 (ENSBGRG00000013251) #20	CPSF3 (ENSBGRG00000013338) #21	ITGB1BP1 (ENSBGRG00000013746) #22	ASAP2 (ENSBGRG00000013865) #23	MBOAT2 (ENSBGRG00000014129) #25	KIDINS220 (ENSBGRG00000014341) #26	ENSBGRG00000015325	ID2 (ENSBGRG00000015396) #27	RNF144A (ENSBGRG00000015479) #29	RSAD2 (ENSBGRG00000015611) #30	CMPK2 (ENSBGRG00000015652) #31	SOX11 (ENSBGRG00000015914) #32
Wild yak	MODERN SPECIES	1783												YWHAQ (ENSBMUG00000003324) #18	ADAM17 (ENSBMUG00000003344) #19	IAH1 (ENSBMUG00000003367) #20	CPSF3 (ENSBMUG00000003413) #21	ITGB1BP1 (ENSBMUG00000003480) #22	ASAP2 (ENSBMUG00000003572) #23	ENSBMUG00000003596	MBOAT2 (ENSBMUG00000003625) #25	KIDINS220 (ENSBMUG00000003783) #26	ID2 (ENSBMUG00000003840) #27
Bos_b	ANCESTRAL SPECIES	16	ENSGT00390000004263.b #9	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.a.a.a.a.a.a	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.fb.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT01090000260040.b.b.b.b.b ##18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.k #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00950000182858.B.a.d	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.b.a.e	ENSGT00940000155853	ENSGT00940000156689	ENSGT00390000008938	ENSGT00390000018089
Hybrid Bos Indicus	MODERN SPECIES	2	ENSBIXG00005007375 #9	ENSBIXG00005022288	NOL10 (ENSBIXG00005022242) #10	ENSBIXG00005022099 #11	HPCAL1 (ENSBIXG00005006887) #12	RRM2 (ENSBIXG00005022029) #13	ENSBIXG00005003712 #14	KLF11 (ENSBIXG00005021989) #15	GRHL1 (ENSBIXG00005003698) #16	TAF1B (ENSBIXG00005021864) #17	ENSBIXG00005021842	YWHAQ (ENSBIXG00005021830) #18	ADAM17 (ENSBIXG00005002613) #19	IAH1 (ENSBIXG00005021763) #20	CPSF3 (ENSBIXG00005003653) #21	ITGB1BP1 (ENSBIXG00005021598) #22	ASAP2 (ENSBIXG00005021521) #23	MBOAT2 (ENSBIXG00005021383) #25	KIDINS220 (ENSBIXG00005021201) #26	ID2 (ENSBIXG00005020723) #27	RNF144A (ENSBIXG00005020588) #29	RSAD2 (ENSBIXG00005020552) #30	CMPK2 (ENSBIXG00005003470) #31	SOX11 (ENSBIXG00005020448) #32	ENSBIXG00005020418	ENSBIXG00005020391	ENSBIXG00005020351	DAB2IP (ENSBIXG00005005534)	TTLL11 (ENSBIXG00005003298)	NDUFA8 (ENSBIXG00005003287)	ENSBIXG00005007672
Cow	MODERN SPECIES	2	PDIA6 (ENSBTAG00000001928) #8	ATP6V1C2 (ENSBTAG00000001927) #9	NOL10 (ENSBTAG00000002716) #10	ODC1 (ENSBTAG00000004256) #11	HPCAL1 (ENSBTAG00000004259) #12	RRM2 (ENSBTAG00000008216) #13	CYS1 (ENSBTAG00000052669) #14	KLF11 (ENSBTAG00000046218) #15	GRHL1 (ENSBTAG00000007485) #16	TAF1B (ENSBTAG00000007543) #17	ENSBTAG00000048394	YWHAQ (ENSBTAG00000002108) ##18	ADAM17 (ENSBTAG00000001141) #19	IAH1 (ENSBTAG00000001140) #20	CPSF3 (ENSBTAG00000019735) #21	ITGB1BP1 (ENSBTAG00000013063) #22	ASAP2 (ENSBTAG00000002329) #23	MBOAT2 (ENSBTAG00000008160) #25	KIDINS220 (ENSBTAG00000007963) #26	ID2 (ENSBTAG00000021187) #27	ENSBTAG00000037793	RNF144A (ENSBTAG00000044064) #29	RSAD2 (ENSBTAG00000016061) #30	CMPK2 (ENSBTAG00000019979) #31	ENSBTAG00000051441	SOX11 (ENSBTAG00000050114) #32	ENSBTAG00000039201	ENSBTAG00000039186	GGTA1 (ENSBTAG00000012090)	DAB2IP (ENSBTAG00000008232)	ENSBTAG00000012827
American bison	MODERN SPECIES	3221	KCNF1 (ENSBBBG00000002161) #7	ENSBBBG00000011712	ENSBBBG00000011729 #8	ATP6V1C2 (ENSBBBG00000011779) #9	NOL10 (ENSBBBG00000002209) #10	ODC1 (ENSBBBG00000011893) #11	HPCAL1 (ENSBBBG00000007122) #12	RRM2 (ENSBBBG00000011911) #13	KLF11 (ENSBBBG00000011923) #15	GRHL1 (ENSBBBG00000011949) #16	TAF1B (ENSBBBG00000011961) #17	YWHAQ (ENSBBBG00000011974) #18	ADAM17 (ENSBBBG00000002244) #19	IAH1 (ENSBBBG00000008101) #20	CPSF3 (ENSBBBG00000012019) #21	ITGB1BP1 (ENSBBBG00000012050) #22	ENSBBBG00000012059	ASAP2 (ENSBBBG00000012138) #23	MBOAT2 (ENSBBBG00000012157) #25	ENSBBBG00000012162	KIDINS220 (ENSBBBG00000012237) #26	ID2 (ENSBBBG00000012256) #27	RNF144A (ENSBBBG00000007447) #29	RSAD2 (ENSBBBG00000012264) #30	ENSBBBG00000012270	ENSBBBG00000012273	ENSBBBG00000002313	ENSBBBG00000002314	ENSBBBG00000012306	DAB2IP (ENSBBBG00000012385)	ENSBBBG00000002359
Caprinae	ANCESTRAL SPECIES	9	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.fb.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699.d #21	ENSGT00390000003990.k #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464.a #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000154706.ib	ENSGT00950000182858.B.a.d	ENSGT00950000182858.B.b.b	ENSGT00950000182858.B.b.a	ENSGT00940000155853	ENSGT00940000156689	ENSGT00390000008938
Rambouillet Sheep	MODERN SPECIES	19	KCNF1 (ENSOARG00020010045) #7	PDIA6 (ENSOARG00020009823) #8	ATP6V1C2 (ENSOARG00020009600) #9	NOL10 (ENSOARG00020009305) #10	ODC1 (ENSOARG00020009225) #11	HPCAL1 (ENSOARG00020009151) #12	ENSOARG00020009097 #13	CYS1 (ENSOARG00020009035) #14	KLF11 (ENSOARG00020008965) #15	GRHL1 (ENSOARG00020008773) #16	TAF1B (ENSOARG00020008727) #17	YWHAQ (ENSOARG00020008682) #18	ADAM17 (ENSOARG00020008512) #19	IAH1 (ENSOARG00020008401) #20	CPSF3 (ENSOARG00020008301) #21	ITGB1BP1 (ENSOARG00020008178) #22	ASAP2 (ENSOARG00020007758) #23	MBOAT2 (ENSOARG00020007653) #25	KIDINS220 (ENSOARG00020007030) #26	ID2 (ENSOARG00020006940) #27	RNF144A (ENSOARG00020006856) #29	ENSOARG00020006787 #30	CMPK2 (ENSOARG00020006720) #31	ENSOARG00020006589 #30	ENSOARG00020006554	ENSOARG00020016131	ENSOARG00020016051	ENSOARG00020015864	DAB2IP (ENSOARG00020014930)	ENSOARG00020014819	NDUFA8 (ENSOARG00020014774)
Goat	DUPLICATION
Goat	MODERN SPECIES	22	ENSCHIG00000000620	SLC25A24 (ENSCHIG00000023537)	VAV3 (ENSCHIG00000016068)	ENSCHIG00000009992	NTNG1 (ENSCHIG00000020049)	PRMT6 (ENSCHIG00000006399)	ENSCHIG00000016071	ENSCHIG00000021505	ENSCHIG00000025322	ENSCHIG00000013913	ENSCHIG00000009354 #21	ENSCHIG00000025530	ENSCHIG00000015030	RNPC3 (ENSCHIG00000020361)	COL11A1 (ENSCHIG00000012424)	ENSCHIG00000017064 #22	OLFM3 (ENSCHIG00000008401)	S1PR1 (ENSCHIG00000008675)	DPH5 (ENSCHIG00000022866)	SLC30A7 (ENSCHIG00000008776)	EXTL2 (ENSCHIG00000016039)	ENSCHIG00000021886	ENSCHIG00000011792	ENSCHIG00000009839	GPR88 (ENSCHIG00000003315)	CDC14A (ENSCHIG00000014573)	RTCA (ENSCHIG00000018937)	ENSCHIG00000016353	LRRC39 (ENSCHIG00000021230)	TRMT13 (ENSCHIG00000015395)	SASS6 (ENSCHIG00000018431)
Goat	MODERN SPECIES	2	ATP6V1C2 (ENSCHIG00000017272) #9	NOL10 (ENSCHIG00000012935) #10	ENSCHIG00000027003 #11	HPCAL1 (ENSCHIG00000019475) #12	RRM2 (ENSCHIG00000009694) #13	ENSCHIG00000004531	CYS1 (ENSCHIG00000018115) #14	KLF11 (ENSCHIG00000011294) #15	ENSCHIG00000026755 #16	TAF1B (ENSCHIG00000013783) #17	ENSCHIG00000012158	YWHAQ (ENSCHIG00000012589) #18	ADAM17 (ENSCHIG00000013595) #19	IAH1 (ENSCHIG00000016467) #20	CPSF3 (ENSCHIG00000013973) #21	ENSCHIG00000020028 #22	ASAP2 (ENSCHIG00000022796) #23	ENSCHIG00000012410	MBOAT2 (ENSCHIG00000026251) #25	KIDINS220 (ENSCHIG00000026710) #26	ENSCHIG00000018361 #27	RNF144A (ENSCHIG00000016336) #29	RSAD2 (ENSCHIG00000021832) #30	CMPK2 (ENSCHIG00000012790) #31	SOX11 (ENSCHIG00000024868) #32	ENSCHIG00000014881	ENSCHIG00000021333	ENSCHIG00000023895	ENSCHIG00000009248	ENSCHIG00000023562	DAB2IP (ENSCHIG00000006785)
Yarkand deer	MODERN SPECIES	2	PDIA6 (ENSCHYG00000009406) #8	ATP6V1C2 (ENSCHYG00000009711) #9	NOL10 (ENSCHYG00000010137) #10	ENSCHYG00000011027 #11	HPCAL1 (ENSCHYG00000011179) #12	ENSCHYG00000011216	ENSCHYG00000011258 #13	KLF11 (ENSCHYG00000011297) #15	GRHL1 (ENSCHYG00000011321) #16	TAF1B (ENSCHYG00000011467) #17	ENSCHYG00000011680	YWHAQ (ENSCHYG00000011701) #18	ADAM17 (ENSCHYG00000011771) #19	IAH1 (ENSCHYG00000012019) #20	CPSF3 (ENSCHYG00000012112) #21	ENSCHYG00000012310 #22	ASAP2 (ENSCHYG00000012499) #23	ENSCHYG00000013479	MBOAT2 (ENSCHYG00000013496) #25	KIDINS220 (ENSCHYG00000013747) #26	ID2 (ENSCHYG00000015082) #27	RNF144A (ENSCHYG00000015190) #29	RSAD2 (ENSCHYG00000015364) #30	CMPK2 (ENSCHYG00000015445) #31	ENSCHYG00000015614	ENSCHYG00000015664	ENSCHYG00000016003	DAB2IP (ENSCHYG00000016211)	ENSCHYG00000016926	NDUFA8 (ENSCHYG00000016988)	MORN5 (ENSCHYG00000017039)
Cetacea	ANCESTRAL SPECIES	16	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.db.b #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.k #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195.d	ENSGT00390000002448	ENSGT00730000111137
Odontoceti	ANCESTRAL SPECIES	15	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.db.b #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.k #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195.d	ENSGT00390000002448	ENSGT00730000111137
Odontoceti_a	ANCESTRAL SPECIES	12	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.db.b #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.k #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195.d	ENSGT00390000002448	ENSGT00730000111137
Odontoceti_b	ANCESTRAL SPECIES	15	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.db.b #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.k #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195.d	ENSGT00390000002448	ENSGT00730000111137
Monodontidae	ANCESTRAL SPECIES	13	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a.db.b #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990.k #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195.d.b	ENSGT00390000002448	ENSGT00730000111137	ENSGT00940000155671	ENSGT00940000157666
Beluga whale	MODERN SPECIES	37	PDIA6 (ENSDLEG00000004606) #8	ATP6V1C2 (ENSDLEG00000004632) #9	NOL10 (ENSDLEG00000004668) #10	ODC1 (ENSDLEG00000004685) #11	HPCAL1 (ENSDLEG00000004713) #12	ENSDLEG00000004724 #13	CYS1 (ENSDLEG00000004756) #14	KLF11 (ENSDLEG00000004778) #15	GRHL1 (ENSDLEG00000004790) #16	TAF1B (ENSDLEG00000004806) #17	YWHAQ (ENSDLEG00000004846) #18	ADAM17 (ENSDLEG00000004858) #19	ENSDLEG00000004471	IAH1 (ENSDLEG00000004484) #20	CPSF3 (ENSDLEG00000004493) #21	ITGB1BP1 (ENSDLEG00000004511) #22	ASAP2 (ENSDLEG00000004523) #23	MBOAT2 (ENSDLEG00000004585) #25	KIDINS220 (ENSDLEG00000004637) #26	ID2 (ENSDLEG00000004751) #27	RNF144A (ENSDLEG00000004760) #29	ENSDLEG00000004773
Narwhal	MODERN SPECIES	305	KCNF1 (ENSMMNG00015006742) #7	PDIA6 (ENSMMNG00015006773) #8	ATP6V1C2 (ENSMMNG00015006876) #9	NOL10 (ENSMMNG00015006937) #10	ENSMMNG00015006983 #11	HPCAL1 (ENSMMNG00015007009) #12	ENSMMNG00015007031 #13	CYS1 (ENSMMNG00015007058) #14	KLF11 (ENSMMNG00015007075) #15	GRHL1 (ENSMMNG00015007097) #16	TAF1B (ENSMMNG00015007142) #17	YWHAQ (ENSMMNG00015007193) #18	ADAM17 (ENSMMNG00015007247) #19	IAH1 (ENSMMNG00015007332) #20	CPSF3 (ENSMMNG00015007400) #21	ITGB1BP1 (ENSMMNG00015007476) #22	ASAP2 (ENSMMNG00015007585) #23	MBOAT2 (ENSMMNG00015007697) #25	KIDINS220 (ENSMMNG00015007796) #26	ID2 (ENSMMNG00015007903) #27	RNF144A (ENSMMNG00015007925) #29	SOX11 (ENSMMNG00015007940) #32	ENSMMNG00015007954	COLEC11 (ENSMMNG00015007976) #35	ENSMMNG00015008005 ##36	RNASEH1 (ENSMMNG00015008036) #37	ADI1 (ENSMMNG00015008063)	TRAPPC12 (ENSMMNG00015008082)	EIPR1 (ENSMMNG00015008117)	MYT1L (ENSMMNG00015008281)	PXDN (ENSMMNG00015008507)
Vaquita	MODERN SPECIES	4	KCNF1 (ENSPSNG00000022584) #7	PDIA6 (ENSPSNG00000022580) #8	ATP6V1C2 (ENSPSNG00000022577) #9	NOL10 (ENSPSNG00000022572) #10	ENSPSNG00000022567 #11	HPCAL1 (ENSPSNG00000022565) #12	ENSPSNG00000022562 #13	CYS1 (ENSPSNG00000022560) #14	KLF11 (ENSPSNG00000022558) #15	GRHL1 (ENSPSNG00000022556) #16	TAF1B (ENSPSNG00000022554) #17	YWHAQ (ENSPSNG00000022551) #18	ADAM17 (ENSPSNG00000022548) #19	IAH1 (ENSPSNG00000022542) #20	CPSF3 (ENSPSNG00000022538) #21	ENSPSNG00000022534 #22	ASAP2 (ENSPSNG00000022513) #23	MBOAT2 (ENSPSNG00000022501) #25	KIDINS220 (ENSPSNG00000022485) #26	ID2 (ENSPSNG00000022474) #27	RNF144A (ENSPSNG00000022468) #29	RSAD2 (ENSPSNG00000022461) #30	CMPK2 (ENSPSNG00000022458) #31	SOX11 (ENSPSNG00000022450) #32	DCDC2C (ENSPSNG00000022437) #33	COLEC11 (ENSPSNG00000022428) #35	ENSPSNG00000022424 ##36	RNASEH1 (ENSPSNG00000022419) #37	ENSPSNG00000022415	TRAPPC12 (ENSPSNG00000022403)	EIPR1 (ENSPSNG00000022392)
Dolphin	MODERN SPECIES	1074												YWHAQ (ENSTTRG00000000871) #18	ADAM17 (ENSTTRG00000000868) #19	IAH1 (ENSTTRG00000000865) #20	CPSF3 (ENSTTRG00000000861) #21	ITGB1BP1 (ENSTTRG00000000859) #22	ASAP2 (ENSTTRG00000000856) #23
Sperm whale	MODERN SPECIES	3	PQLC3 (ENSPCTG00005013870)	KCNF1 (ENSPCTG00005013707) #7	PDIA6 (ENSPCTG00005013450) #8	ATP6V1C2 (ENSPCTG00005013317) #9	NOL10 (ENSPCTG00005013060) #10	ODC1 (ENSPCTG00005012986) #11	HPCAL1 (ENSPCTG00005012942) #12	RRM2 (ENSPCTG00005012888) #13	ENSPCTG00005012849 #16	TAF1B (ENSPCTG00005012791) #17	YWHAQ (ENSPCTG00005012710) #18	ENSPCTG00005012664	ADAM17 (ENSPCTG00005012570) #19	IAH1 (ENSPCTG00005012450) #20	CPSF3 (ENSPCTG00005011872) #21	ENSPCTG00005011637 #22	ENSPCTG00005011590	ASAP2 (ENSPCTG00005011387) #23	MBOAT2 (ENSPCTG00005011265) #25	KIDINS220 (ENSPCTG00005011195) #26	RNF144A (ENSPCTG00005011143) #29	RSAD2 (ENSPCTG00005011072) #30	CMPK2 (ENSPCTG00005011012) #31	ENSPCTG00005010966	COLEC11 (ENSPCTG00005010632) #35	RPS7 (ENSPCTG00005010552) #36	RNASEH1 (ENSPCTG00005010508) #37	ADI1 (ENSPCTG00005010460)	TRAPPC12 (ENSPCTG00005010367)	EIPR1 (ENSPCTG00005010312)	MYT1L (ENSPCTG00005007857)
Blue whale	MODERN SPECIES	4	NOL10 (ENSBMSG00010018130) #10	ENSBMSG00010018302 #11	HPCAL1 (ENSBMSG00010018376) #12	ENSBMSG00010018397	RRM2 (ENSBMSG00010018407) #13	CYS1 (ENSBMSG00010018428) #14	KLF11 (ENSBMSG00010018472) #15	ENSBMSG00010018599 #16	ENSBMSG00010018631 #16	TAF1B (ENSBMSG00010018671) #17	ENSBMSG00010018704	YWHAQ (ENSBMSG00010018734) #18	ADAM17 (ENSBMSG00010018804) #19	ENSBMSG00010018884 #20	CPSF3 (ENSBMSG00010018925) #21	ENSBMSG00010019013 #22	ASAP2 (ENSBMSG00010019066) #23	MBOAT2 (ENSBMSG00010019136) #25	KIDINS220 (ENSBMSG00010019274) #26	ID2 (ENSBMSG00010019337) #27	RNF144A (ENSBMSG00010019394) #29	RSAD2 (ENSBMSG00010019426) #30	CMPK2 (ENSBMSG00010019458) #31	DCDC2C (ENSBMSG00010019611) #33	COLEC11 (ENSBMSG00010019717) #35	RPS7 (ENSBMSG00010019975) #36	RNASEH1 (ENSBMSG00010013874) #37	ENSBMSG00010013901	ENSBMSG00010013937	ENSBMSG00010013971	EIPR1 (ENSBMSG00010013997)
Artiodactyla_a	ANCESTRAL SPECIES																	ENSGT00390000003990.l #22
Artiodactyla_b	ANCESTRAL SPECIES																	ENSGT00390000003990.l #22
Pecora	ANCESTRAL SPECIES																	ENSGT00390000003990.l #22
Yarkand deer	MODERN SPECIES	6	ARID5B (ENSCHYG00000025278)	ENSCHYG00000025249	ENSCHYG00000025219	ENSCHYG00000025136	ENSCHYG00000025085	ENSCHYG00000025062	ENSCHYG00000023912	ENSCHYG00000023664	ENSCHYG00000023580	ENSCHYG00000023526	ENSCHYG00000023396	ENSCHYG00000021591	ENSCHYG00000021443	ENSCHYG00000021287	ENSCHYG00000021115	ENSCHYG00000021067 #22	FAM13C (ENSCHYG00000020550)	PHYHIPL (ENSCHYG00000020377)	BICC1 (ENSCHYG00000019850)	ENSCHYG00000019753	RASGEF1A (ENSCHYG00000019274)	ENSCHYG00000019209	CSGALNACT2 (ENSCHYG00000019076)	ENSCHYG00000018676	AGT (ENSCHYG00000018575)	COG2 (ENSCHYG00000018097)	ENSCHYG00000017973	ENSCHYG00000017800	ENSCHYG00000017688	ENSCHYG00000017584	ENSCHYG00000017569
Percora_a	ANCESTRAL SPECIES																	ENSGT00390000003990.l #22
Siberian musk deer	MODERN SPECIES	1252						ENSMMSG00000014179	IPO8 (ENSMMSG00000014207)	CAPRIN2 (ENSMMSG00000014356)	ENSMMSG00000015236	DENND5B (ENSMMSG00000015290)	ETFBKMT (ENSMMSG00000015612)	AMN1 (ENSMMSG00000015637)	ENSMMSG00000015682	ENSMMSG00000015778	RESF1 (ENSMMSG00000015796)	ENSMMSG00000015824 #22	BICD1 (ENSMMSG00000015855)	ENSMMSG00000015924 #20
Cetacea	ANCESTRAL SPECIES	11	ENSGT00940000162441	ENSGT00940000161396	ENSGT00940000163395	ENSGT00390000014303	ENSGT00940000154732	ENSGT00390000013383	ENSGT00950000183094.b.b	ENSGT00940000156387	ENSGT00390000000916.e	ENSGT00940000157051	ENSGT00940000154807.b	ENSGT00390000018344.l	ENSGT00390000011152	ENSGT00940000158673	ENSGT00940000156943	ENSGT00390000003990.l #22	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT01000000220806
Odontoceti	ANCESTRAL SPECIES	10	ENSGT00940000162441	ENSGT00940000161396	ENSGT00940000163395	ENSGT00390000014303	ENSGT00940000154732	ENSGT00390000013383	ENSGT00950000183094.b.b	ENSGT00940000156387	ENSGT00390000000916.e	ENSGT00940000157051	ENSGT00940000154807.b	ENSGT00390000018344.l	ENSGT00390000011152	ENSGT00940000158673	ENSGT00940000156943	ENSGT00390000003990.l #22	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT01000000220806
Sperm whale	MODERN SPECIES	10	ZNF24 (ENSPCTG00005006079)	ZNF396 (ENSPCTG00005006093)	INO80C (ENSPCTG00005006106)	GALNT1 (ENSPCTG00005006130)	C18orf21 (ENSPCTG00005006174)	RPRD1A (ENSPCTG00005006209)	SLC39A6 (ENSPCTG00005006250)	ELP2 (ENSPCTG00005006318)	MOCOS (ENSPCTG00005006528)	FHOD3 (ENSPCTG00005006676)	TPGS2 (ENSPCTG00005006766)	KIAA1328 (ENSPCTG00005006884)	CELF4 (ENSPCTG00005007148)	ENSPCTG00005007437	PIK3C3 (ENSPCTG00005007499)	ENSPCTG00005007674 #22	ENSPCTG00005007696	SYT4 (ENSPCTG00005007715)	ENSPCTG00005007743	ENSPCTG00005007758	SETBP1 (ENSPCTG00005007777)	SLC14A2 (ENSPCTG00005007803)	SLC14A1 (ENSPCTG00005007875)	SIGLEC15 (ENSPCTG00005008000)	EPG5 (ENSPCTG00005008044)	PSTPIP2 (ENSPCTG00005008088)	ATP5F1A (ENSPCTG00005008127)	HAUS1 (ENSPCTG00005008172)	C19H18orf25 (ENSPCTG00005008306)	RNF165 (ENSPCTG00005008364)	ENSPCTG00005008447
Odontoceti_a	ANCESTRAL SPECIES	9	ENSGT00940000162441	ENSGT00940000161396	ENSGT00940000163395.a	ENSGT00390000014303	ENSGT00940000154732	ENSGT00390000013383	ENSGT00950000183094.b.b	ENSGT00940000156387	ENSGT00390000000916.e	ENSGT00940000157051	ENSGT00940000154807.b	ENSGT00390000018344.l	ENSGT00390000011152	ENSGT00940000158673	ENSGT00940000156943	ENSGT00390000003990.l #22	ENSGT00390000003349.d	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b
Odontoceti_b	ANCESTRAL SPECIES	10	ENSGT00940000161396	ENSGT00940000163395.a	ENSGT00390000014303	ENSGT00940000154732.q.a	ENSGT00390000013383	ENSGT00950000183094.b.b	ENSGT00940000156387	ENSGT00390000000916.e	ENSGT00940000157051	ENSGT00940000154807.b	ENSGT00390000018344.l	ENSGT00390000011152	ENSGT00940000158673	ENSGT00950000183087.A.a.a.a.b.b.a.b.a.b	ENSGT00940000156943	ENSGT00390000003990.l #22	ENSGT00390000003349.d	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b
Vaquita	MODERN SPECIES	5	ZNF24 (ENSPSNG00000005024)	INO80C (ENSPSNG00000004948)	ENSPSNG00000004924	C18orf21 (ENSPSNG00000004900)	RPRD1A (ENSPSNG00000004790)	SLC39A6 (ENSPSNG00000004750)	ENSPSNG00000004663	MOCOS (ENSPSNG00000017176)	FHOD3 (ENSPSNG00000017074)	TPGS2 (ENSPSNG00000016926)	KIAA1328 (ENSPSNG00000016715)	CELF4 (ENSPSNG00000016543)	ENSPSNG00000016468	ENSPSNG00000016432	ENSPSNG00000016385	ENSPSNG00000016328 #22	PIK3C3 (ENSPSNG00000015874)	SYT4 (ENSPSNG00000015659)	ENSPSNG00000015545	ENSPSNG00000015523	ENSPSNG00000015482	SETBP1 (ENSPSNG00000015348)	SLC14A2 (ENSPSNG00000015077)	SLC14A1 (ENSPSNG00000014661)	SIGLEC15 (ENSPSNG00000014516)	EPG5 (ENSPSNG00000014417)	PSTPIP2 (ENSPSNG00000014312)	ATP5F1A (ENSPSNG00000014199)	HAUS1 (ENSPSNG00000014089)	C18orf25 (ENSPSNG00000013977)	RNF165 (ENSPSNG00000013772)
Blue whale	MODERN SPECIES	5	ZNF396 (ENSBMSG00010018521)	INO80C (ENSBMSG00010018540)	GALNT1 (ENSBMSG00010018559)	C18orf21 (ENSBMSG00010018590)	RPRD1A (ENSBMSG00010018617)	SLC39A6 (ENSBMSG00010018655)	ELP2 (ENSBMSG00010018709)	MOCOS (ENSBMSG00010018860)	FHOD3 (ENSBMSG00010018917)	ENSBMSG00010019072	KIAA1328 (ENSBMSG00010019276)	CELF4 (ENSBMSG00010019504)	ENSBMSG00010020068	ENSBMSG00010020078	PIK3C3 (ENSBMSG00010020103)	ENSBMSG00010020199 #22	ENSBMSG00010020228	SYT4 (ENSBMSG00010020248)	SETBP1 (ENSBMSG00010020281)	SLC14A2 (ENSBMSG00010020311)	SLC14A1 (ENSBMSG00010020365)	SIGLEC15 (ENSBMSG00010020448)	EPG5 (ENSBMSG00010020473)	PSTPIP2 (ENSBMSG00010020499)	ENSBMSG00010020513	ATP5F1A (ENSBMSG00010020528)	HAUS1 (ENSBMSG00010020557)	C18orf25 (ENSBMSG00010020596)	RNF165 (ENSBMSG00010020628)	LOXHD1 (ENSBMSG00010020792)	ST8SIA5 (ENSBMSG00010021215)
Suina	ANCESTRAL SPECIES	13	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448	ENSGT00730000111137
Chacoan peccary	MODERN SPECIES	775	KCNF1 (ENSCWAG00000013309) #7	PDIA6 (ENSCWAG00000013173) #8	ATP6V1C2 (ENSCWAG00000012466) #9	NOL10 (ENSCWAG00000012218) #10	ODC1 (ENSCWAG00000012155) #11	HPCAL1 (ENSCWAG00000012123) #12	RRM2 (ENSCWAG00000012081) #13	CYS1 (ENSCWAG00000012002) #14	KLF11 (ENSCWAG00000011855) #15	GRHL1 (ENSCWAG00000011623) #16	TAF1B (ENSCWAG00000011471) #17	YWHAQ (ENSCWAG00000011406) #18	ADAM17 (ENSCWAG00000011306) #19	IAH1 (ENSCWAG00000011129) #20	CPSF3 (ENSCWAG00000011057) #21	ITGB1BP1 (ENSCWAG00000010974) #22	ASAP2 (ENSCWAG00000010606) #23	MBOAT2 (ENSCWAG00000010541) #25	KIDINS220 (ENSCWAG00000010112) #26	ID2 (ENSCWAG00000010057) #27	RNF144A (ENSCWAG00000010020) #29	RSAD2 (ENSCWAG00000009959) #30	CMPK2 (ENSCWAG00000009912) #31	SOX11 (ENSCWAG00000009865) #32	DCDC2C (ENSCWAG00000009777) #33	COLEC11 (ENSCWAG00000009361) #35	RPS7 (ENSCWAG00000009286) #36	RNASEH1 (ENSCWAG00000009165) #37	ADI1 (ENSCWAG00000009097)	TRAPPC12 (ENSCWAG00000009065)	EIPR1 (ENSCWAG00000009008)
Pig	MODERN SPECIES	11	KCNF1 (ENSSSCG00000033463) #7	PDIA6 (ENSSSCG00000008633) #8	ATP6V1C2 (ENSSSCG00000008634) #9	NOL10 (ENSSSCG00000008635) #10	ODC1 (ENSSSCG00000027121) #11	HPCAL1 (ENSSSCG00000003663) #12	ENSSSCG00000031741 #13	CYS1 (ENSSSCG00000040267) #14	KLF11 (ENSSSCG00000038643) #15	GRHL1 (ENSSSCG00000026068) #16	TAF1B (ENSSSCG00000008637) #17	YWHAQ (ENSSSCG00000008638) ##18	ADAM17 (ENSSSCG00000008641) #19	IAH1 (ENSSSCG00000008640) #20	CPSF3 (ENSSSCG00000020799) #21	ITGB1BP1 (ENSSSCG00000029313) #22	ASAP2 (ENSSSCG00000008642) #23	MBOAT2 (ENSSSCG00000023539) #25	KIDINS220 (ENSSSCG00000008644) #26	ID2 (ENSSSCG00000008645) #27	RNF144A (ENSSSCG00000008646) #29	RSAD2 (ENSSSCG00000008648) #30	CMPK2 (ENSSSCG00000008647) #31	ENSSSCG00000047407	SOX11 (ENSSSCG00000008649) #32	DCDC2C (ENSSSCG00000008651) #33	COLEC11 (ENSSSCG00000025629) #35	ENSSSCG00000031088 ##36	RNASEH1 (ENSSSCG00000025305) #37	ADI1 (ENSSSCG00000029161)	TRAPPC12 (ENSSSCG00000024665)
Laurasiatheria_b	ANCESTRAL SPECIES	17	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Laurasiatheria_c	ANCESTRAL SPECIES	14	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Chiroptera	ANCESTRAL SPECIES	10	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Megabat	MODERN SPECIES	1372												ENSPVAG00000005334 ##18	ADAM17 (ENSPVAG00000005332) #19	IAH1 (ENSPVAG00000005329) #20	CPSF3 (ENSPVAG00000005324) #21	ITGB1BP1 (ENSPVAG00000005320) #22	ASAP2 (ENSPVAG00000005303) #23
Microchiroptera	ANCESTRAL SPECIES	14	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Greater horseshoe bat	MODERN SPECIES	4	PDIA6 (ENSRFEG00010008218) #8	ATP6V1C2 (ENSRFEG00010008402) #9	NOL10 (ENSRFEG00010008527) #10	ODC1 (ENSRFEG00010008653) #11	HPCAL1 (ENSRFEG00010008686) #12	ENSRFEG00010008723 #13	CYS1 (ENSRFEG00010008838) #14	KLF11 (ENSRFEG00010008867) #15	GRHL1 (ENSRFEG00010008922) #16	ENSRFEG00010009191	TAF1B (ENSRFEG00010009242) #17	YWHAQ (ENSRFEG00010009419) #18	ADAM17 (ENSRFEG00010009462) #19	IAH1 (ENSRFEG00010009506) #20	CPSF3 (ENSRFEG00010009573) #21	ITGB1BP1 (ENSRFEG00010009640) #22	ASAP2 (ENSRFEG00010009716) #23	ENSRFEG00010009824	ENSRFEG00010009833	MBOAT2 (ENSRFEG00010009854) #25	KIDINS220 (ENSRFEG00010009917) #26	ENSRFEG00010010062 #27	RNF144A (ENSRFEG00010010097) #29	RSAD2 (ENSRFEG00010010140) #30	CMPK2 (ENSRFEG00010010183) #31	ENSRFEG00010010195	SOX11 (ENSRFEG00010010241) #32	DCDC2C (ENSRFEG00010010389) #33	ALLC (ENSRFEG00010010543) #34	COLEC11 (ENSRFEG00010010705) #35	RPS7 (ENSRFEG00010010903) #36
Microbat	MODERN SPECIES	1345	ENSMLUG00000003384	ROCK2 (ENSMLUG00000015664)	SLC66A3 (ENSMLUG00000015653)	PDIA6 (ENSMLUG00000012215) #8	ATP6V1C2 (ENSMLUG00000012207) #9	NOL10 (ENSMLUG00000012309) #10	ENSMLUG00000010423 #11	RRM2 (ENSMLUG00000010596) #13	KLF11 (ENSMLUG00000002295) #15	GRHL1 (ENSMLUG00000002290) #16	TAF1B (ENSMLUG00000002273) #17	YWHAQ (ENSMLUG00000005383) #18	ADAM17 (ENSMLUG00000010676) #19	IAH1 (ENSMLUG00000010667) #20	CPSF3 (ENSMLUG00000010636) #21	ITGB1BP1 (ENSMLUG00000010629) #22
Equus	ANCESTRAL SPECIES	7	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Donkey	MODERN SPECIES	26	KCNF1 (ENSEASG00005027361) #7	PDIA6 (ENSEASG00005004942) #8	ATP6V1C2 (ENSEASG00005004932) #9	NOL10 (ENSEASG00005004919) #10	ENSEASG00005004910 #11	HPCAL1 (ENSEASG00005004903) #12	RRM2 (ENSEASG00005004892) #13	CYS1 (ENSEASG00005025190) #14	KLF11 (ENSEASG00005004881) #15	GRHL1 (ENSEASG00005028173) #16	TAF1B (ENSEASG00005004803) #17	YWHAQ (ENSEASG00005004792) #18	ADAM17 (ENSEASG00005004001) #19	ENSEASG00005026278 #20	CPSF3 (ENSEASG00005003970) #21	ITGB1BP1 (ENSEASG00005003969) #22	ASAP2 (ENSEASG00005000562) #23	MBOAT2 (ENSEASG00005000101) #25	KIDINS220 (ENSEASG00005000060) #26	ID2 (ENSEASG00005000025) #27	RNF144A (ENSEASG00005022228) #29	RSAD2 (ENSEASG00005022224) #30	CMPK2 (ENSEASG00005022223) #31	ENSEASG00005035871 #32	ENSEASG00005022219 #33	ALLC (ENSEASG00005022214) #34	COLEC11 (ENSEASG00005037869) #35	RPS7 (ENSEASG00005022205) #36	RNASEH1 (ENSEASG00005022200) #37	ADI1 (ENSEASG00005022195)	TRAPPC12 (ENSEASG00005022184)
Horse	MODERN SPECIES	6	PDIA6 (ENSECAG00000022717) #8	ATP6V1C2 (ENSECAG00000010555) #9	NOL10 (ENSECAG00000015177) #10	ODC1 (ENSECAG00000022690) #11	HPCAL1 (ENSECAG00000040270) #12	RRM2 (ENSECAG00000007464) #13	CYS1 (ENSECAG00000039359) #14	KLF11 (ENSECAG00000015820) #15	GRHL1 (ENSECAG00000015969) #16	TAF1B (ENSECAG00000023244) #17	YWHAQ (ENSECAG00000004925) ##18	ENSECAG00000050309	ADAM17 (ENSECAG00000005760) #19	IAH1 (ENSECAG00000018250) #20	CPSF3 (ENSECAG00000019911) #21	ITGB1BP1 (ENSECAG00000024193) #22	ASAP2 (ENSECAG00000024278) #23	ENSECAG00000054846	MBOAT2 (ENSECAG00000015922) #25	KIDINS220 (ENSECAG00000019263) #26	ID2 (ENSECAG00000008738) #27	RNF144A (ENSECAG00000009610) #29	RSAD2 (ENSECAG00000010055) #30	CMPK2 (ENSECAG00000012773) #31	SOX11 (ENSECAG00000037831) #32	ENSECAG00000053393	ENSECAG00000013638 #33	ALLC (ENSECAG00000014068) #34	COLEC11 (ENSECAG00000017488) #35	RPS7 (ENSECAG00000020253) #36	RNASEH1 (ENSECAG00000020695) #37
Carnivora	ANCESTRAL SPECIES	19	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Felidae	ANCESTRAL SPECIES	3	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Panthera	ANCESTRAL SPECIES	2	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448	ENSGT00730000111137
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448	ENSGT00730000111137
lion	MODERN SPECIES	3	PDIA6 (ENSPLOG00000003350) #8	ATP6V1C2 (ENSPLOG00000003251) #9	NOL10 (ENSPLOG00000003174) #10	ODC1 (ENSPLOG00000003104) #11	HPCAL1 (ENSPLOG00000003090) #12	RRM2 (ENSPLOG00000003069) #13	CYS1 (ENSPLOG00000003056) #14	KLF11 (ENSPLOG00000003042) #15	GRHL1 (ENSPLOG00000002984) #16	TAF1B (ENSPLOG00000002921) #17	ENSPLOG00000002895	YWHAQ (ENSPLOG00000002873) #18	ADAM17 (ENSPLOG00000002823) #19	IAH1 (ENSPLOG00000002790) #20	CPSF3 (ENSPLOG00000002732) #21	ITGB1BP1 (ENSPLOG00000002692) #22	ASAP2 (ENSPLOG00000002531) #23	MBOAT2 (ENSPLOG00000002421) #25	KIDINS220 (ENSPLOG00000002235) #26	ID2 (ENSPLOG00000002192) #27	RNF144A (ENSPLOG00000002146) #29	RSAD2 (ENSPLOG00000002128) #30	CMPK2 (ENSPLOG00000002115) #31	ALLC (ENSPLOG00000002071) #34	COLEC11 (ENSPLOG00000002030) #35	RPS7 (ENSPLOG00000001995) #36	RNASEH1 (ENSPLOG00000001905) #37	TRAPPC12 (ENSPLOG00000001834)	ENSPLOG00000001824	EIPR1 (ENSPLOG00000001791)	MYT1L (ENSPLOG00000001290)
leopard	MODERN SPECIES		PDIA6 (ENSPPRG00000018159) #8	ATP6V1C2 (ENSPPRG00000018018) #9	NOL10 (ENSPPRG00000017868) #10	ODC1 (ENSPPRG00000017534) #11	HPCAL1 (ENSPPRG00000017486) #12	ENSPPRG00000017433 #12	RRM2 (ENSPPRG00000017387) #13	KLF11 (ENSPPRG00000017354) #15	GRHL1 (ENSPPRG00000017279) #16	TAF1B (ENSPPRG00000017125) #17	YWHAQ (ENSPPRG00000017069) #18	ENSPPRG00000017043	ADAM17 (ENSPPRG00000016991) #19	IAH1 (ENSPPRG00000016876) #20	CPSF3 (ENSPPRG00000016790) #21	ITGB1BP1 (ENSPPRG00000016726) #22	ASAP2 (ENSPPRG00000016539) #23	MBOAT2 (ENSPPRG00000016261) #25	KIDINS220 (ENSPPRG00000016171) #26	ID2 (ENSPPRG00000015804) #27	ENSPPRG00000015776 #27	RNF144A (ENSPPRG00000015759) #29	RSAD2 (ENSPPRG00000015738) #30	CMPK2 (ENSPPRG00000015716) #31	DCDC2C (ENSPPRG00000015663) #33	ALLC (ENSPPRG00000015621) #34	COLEC11 (ENSPPRG00000015594) #35	RPS7 (ENSPPRG00000015564) #36	RNASEH1 (ENSPPRG00000015513) #37	ADI1 (ENSPPRG00000015485)	ENSPPRG00000015440
Tiger	MODERN SPECIES	581							ODC1 (ENSPTIG00000007491) #11	RRM2 (ENSPTIG00000007390) #13	KLF11 (ENSPTIG00000007061) #15	GRHL1 (ENSPTIG00000007003) #16	TAF1B (ENSPTIG00000006228) #17	YWHAQ (ENSPTIG00000006178) #18	ADAM17 (ENSPTIG00000005404) #19	IAH1 (ENSPTIG00000005299) #20	CPSF3 (ENSPTIG00000003920) #21	ITGB1BP1 (ENSPTIG00000002156) #22	ASAP2 (ENSPTIG00000000985) #23	MBOAT2 (ENSPTIG00000020033) #25	KIDINS220 (ENSPTIG00000019843) #26	ID2 (ENSPTIG00000019724) #27	RNF144A (ENSPTIG00000019714) #29	RSAD2 (ENSPTIG00000019625) #30	ENSPTIG00000019591	DCDC2C (ENSPTIG00000019551) #33	ALLC (ENSPTIG00000019525) #34	RPS7 (ENSPTIG00000019474) #36	RNASEH1 (ENSPTIG00000019034) #37	ADI1 (ENSPTIG00000019002)	ENSPTIG00000018854	EIPR1 (ENSPTIG00000018777)
Cat	MODERN SPECIES	2	KCNF1 (ENSFCAG00000031035) #7	PDIA6 (ENSFCAG00000009258) #8	ATP6V1C2 (ENSFCAG00000009257) #9	NOL10 (ENSFCAG00000009255) #10	ODC1 (ENSFCAG00000027500) #11	HPCAL1 (ENSFCAG00000009252) #12	RRM2 (ENSFCAG00000003942) #13	CYS1 (ENSFCAG00000045113) #14	KLF11 (ENSFCAG00000030965) #15	GRHL1 (ENSFCAG00000007856) #16	TAF1B (ENSFCAG00000007855) #17	YWHAQ (ENSFCAG00000007854) ##18	ADAM17 (ENSFCAG00000007853) #19	IAH1 (ENSFCAG00000023291) #20	CPSF3 (ENSFCAG00000007852) #21	ITGB1BP1 (ENSFCAG00000034320) #22	ASAP2 (ENSFCAG00000007850) #23	MBOAT2 (ENSFCAG00000027684) #25	KIDINS220 (ENSFCAG00000029422) #26	ID2 (ENSFCAG00000026937) #27	RNF144A (ENSFCAG00000000709) #29	RSAD2 (ENSFCAG00000035139) #30	CMPK2 (ENSFCAG00000022513) #31	SOX11 (ENSFCAG00000039092) #32	DCDC2C (ENSFCAG00000044946) #33	ALLC (ENSFCAG00000007504) #34	COLEC11 (ENSFCAG00000031800) #35	RPS7 (ENSFCAG00000023243) #36	RNASEH1 (ENSFCAG00000025832) #37	ADI1 (ENSFCAG00000025763)	TRAPPC12 (ENSFCAG00000024779)
Caniformia	ANCESTRAL SPECIES	18	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Caniformia_b	ANCESTRAL SPECIES	11	ENSGT00940000154459.B	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Ursidae	ANCESTRAL SPECIES	9	ENSGT00940000154459.B	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00390000012138.a.a.j.s	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195
Ursus	ANCESTRAL SPECIES	125	ENSGT00940000154459.B	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT00390000012138.a.a.j.s.a	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448	ENSGT00730000111137
Polar bear	MODERN SPECIES	89	KCNF1 (ENSUMAG00000003301) #7	PDIA6 (ENSUMAG00000003308) #8	ATP6V1C2 (ENSUMAG00000003318) #9	NOL10 (ENSUMAG00000003385) #10	ODC1 (ENSUMAG00000003406) #11	HPCAL1 (ENSUMAG00000003415) #12	RRM2 (ENSUMAG00000003431) #13	KLF11 (ENSUMAG00000003481) #15	GRHL1 (ENSUMAG00000003494) #16	TAF1B (ENSUMAG00000003559) #17	YWHAQ (ENSUMAG00000003646) #18	ADAM17 (ENSUMAG00000003653) #19	ENSUMAG00000003662 #20	ENSUMAG00000003666 #20	CPSF3 (ENSUMAG00000003676) #21	ITGB1BP1 (ENSUMAG00000003689) #22	ASAP2 (ENSUMAG00000003695) #23	ENSUMAG00000003713	MBOAT2 (ENSUMAG00000003744) #25	KIDINS220 (ENSUMAG00000003833) #26	ID2 (ENSUMAG00000003840) #27	RNF144A (ENSUMAG00000003876) #29	RSAD2 (ENSUMAG00000003893) #30	ENSUMAG00000003902	ENSUMAG00000003909	ENSUMAG00000003916	ALLC (ENSUMAG00000003926) #34	COLEC11 (ENSUMAG00000003933) #35	RPS7 (ENSUMAG00000003937) #36	RNASEH1 (ENSUMAG00000003941) #37	TRAPPC12 (ENSUMAG00000003998)
American black bear	MODERN SPECIES	1136												ENSUAMG00000007526 ##18	ADAM17 (ENSUAMG00000007528) #19	IAH1 (ENSUAMG00000007531) #20	CPSF3 (ENSUAMG00000007535) #21	ITGB1BP1 (ENSUAMG00000007538) #22	ASAP2 (ENSUAMG00000007571) #23	ENSUAMG00000007716
Giant Panda	MODERN SPECIES	14	C2orf50 (ENSAMEG00000011580)	KCNF1 (ENSAMEG00000019267) #7	ENSAMEG00000011555 #8	ATP6V1C2 (ENSAMEG00000011506) #9	NOL10 (ENSAMEG00000011438) #10	ODC1 (ENSAMEG00000011415) #11	HPCAL1 (ENSAMEG00000029791) #12	RRM2 (ENSAMEG00000011372) #13	KLF11 (ENSAMEG00000011355) #15	GRHL1 (ENSAMEG00000011320) #16	TAF1B (ENSAMEG00000011301) #17	YWHAQ (ENSAMEG00000008618) #18	ADAM17 (ENSAMEG00000008569) #19	IAH1 (ENSAMEG00000008545) #20	CPSF3 (ENSAMEG00000008493) #21	ITGB1BP1 (ENSAMEG00000008478) #22	ASAP2 (ENSAMEG00000008406) #23	ENSAMEG00000024246	MBOAT2 (ENSAMEG00000008373) #25	KIDINS220 (ENSAMEG00000008328) #26	ID2 (ENSAMEG00000026711) #27	RNF144A (ENSAMEG00000013324) #29	RSAD2 (ENSAMEG00000013333) #30	CMPK2 (ENSAMEG00000013345) #31	SOX11 (ENSAMEG00000013354) #32	ENSAMEG00000026778 #33	ALLC (ENSAMEG00000018438) #34	RPS7 (ENSAMEG00000018435) #36	RNASEH1 (ENSAMEG00000018433) #37	ADI1 (ENSAMEG00000018432)	TRAPPC12 (ENSAMEG00000018428)
Mustelinae	ANCESTRAL SPECIES	55	ENSGT00940000154459.B	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00990000204082	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.b ##36	ENSGT00390000003466 #37	ENSGT00390000008195
Ferret	MODERN SPECIES	178	ATP6V1C2 (ENSMPUG00000013450) #9	NOL10 (ENSMPUG00000013325) #10	ODC1 (ENSMPUG00000013321) #11	HPCAL1 (ENSMPUG00000013302) #12	RRM2 (ENSMPUG00000013295) #13	KLF11 (ENSMPUG00000013287) #15	ENSMPUG00000013281	ENSMPUG00000013277	GRHL1 (ENSMPUG00000013263) #16	TAF1B (ENSMPUG00000013256) #17	YWHAQ (ENSMPUG00000013252) #18	ENSMPUG00000013249	ADAM17 (ENSMPUG00000013236) #19	IAH1 (ENSMPUG00000013218) #20	CPSF3 (ENSMPUG00000013213) #21	ITGB1BP1 (ENSMPUG00000013210) #22	ASAP2 (ENSMPUG00000013197) #23	MBOAT2 (ENSMPUG00000013191) #25	KIDINS220 (ENSMPUG00000013181) #26	ID2 (ENSMPUG00000013178) #27	ENSMPUG00000013173	ENSMPUG00000013172	RNF144A (ENSMPUG00000013154) #29	RSAD2 (ENSMPUG00000013146) #30	CMPK2 (ENSMPUG00000013134) #31	ENSMPUG00000019479	ENSMPUG00000013127	ENSMPUG00000013122	ENSMPUG00000019478	ENSMPUG00000013120	DCDC2C (ENSMPUG00000013104) #33
American mink	MODERN SPECIES	7	C2orf50 (ENSNVIG00000014464)	KCNF1 (ENSNVIG00000014487) #7	PDIA6 (ENSNVIG00000014505) #8	ATP6V1C2 (ENSNVIG00000014715) #9	NOL10 (ENSNVIG00000014778) #10	DCOR (ENSNVIG00000014941) #11	ENSNVIG00000014964	RRM2 (ENSNVIG00000014985) #13	KLF11 (ENSNVIG00000015016) #15	GRHL1 (ENSNVIG00000015046) #16	TAF1B (ENSNVIG00000015127) #17	YWHAQ (ENSNVIG00000015162) #18	ADAM17 (ENSNVIG00000015197) #19	IAH1 (ENSNVIG00000015262) #20	CPSF3 (ENSNVIG00000015301) #21	ITGB1BP1 (ENSNVIG00000015345) #22	ASAP2 (ENSNVIG00000015416) #23	MBOAT2 (ENSNVIG00000015525) #25	KIDINS220 (ENSNVIG00000015535) #26	ID2 (ENSNVIG00000015663) #27	R144A (ENSNVIG00000015685) #29	RSAD2 (ENSNVIG00000015718) #30	ENSNVIG00000015750	SOX11 (ENSNVIG00000015756) #32	DCDC2C (ENSNVIG00000015778) #33	ALLC (ENSNVIG00000015809) #34	COLEC11 (ENSNVIG00000015826) #35	ENSNVIG00000015884 ##36	RNASEH1 (ENSNVIG00000015913) #37	ADI1 (ENSNVIG00000015966)	TRAPPC12 (ENSNVIG00000015971)
Canidae	ANCESTRAL SPECIES	46	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Red fox	MODERN SPECIES	76	KCNF1 (ENSVVUG00000001317) #7	PDIA6 (ENSVVUG00000001332) #8	ATP6V1C2 (ENSVVUG00000001351) #9	NOL10 (ENSVVUG00000001394) #10	ENSVVUG00000001420	ODC1 (ENSVVUG00000001437) #11	HPCAL1 (ENSVVUG00000001457) #12	RRM2 (ENSVVUG00000001484) #13	KLF11 (ENSVVUG00000001585) #15	GRHL1 (ENSVVUG00000001610) #16	TAF1B (ENSVVUG00000001641) #17	YWHAQ (ENSVVUG00000002125) #18	ADAM17 (ENSVVUG00000002136) #19	IAH1 (ENSVVUG00000002169) #20	CPSF3 (ENSVVUG00000002194) #21	ITGB1BP1 (ENSVVUG00000002216) #22	ASAP2 (ENSVVUG00000002403) #23	MBOAT2 (ENSVVUG00000002534) #25	KIDINS220 (ENSVVUG00000003457) #26	ID2 (ENSVVUG00000008464) #27	RNF144A (ENSVVUG00000008507) #29	RSAD2 (ENSVVUG00000008530) #30	ENSVVUG00000008545	ENSVVUG00000008555	ENSVVUG00000008582 #33	ALLC (ENSVVUG00000008603) #34	COLEC11 (ENSVVUG00000008618) #35	RPS7 (ENSVVUG00000008628) #36	RNASEH1 (ENSVVUG00000008633) #37	ADI1 (ENSVVUG00000008646)	TRAPPC12 (ENSVVUG00000008654)
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT00390000016845 #14	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.j.f.a ##36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Dog	MODERN SPECIES	8	KCNF1 (ENSCAFG00845027200) #7	PDIA6 (ENSCAFG00845026954) #8	ATP6V1C2 (ENSCAFG00845026644) #9	NOL10 (ENSCAFG00845026340) #10	ODC1 (ENSCAFG00845026175) #11	HPCAL1 (ENSCAFG00845026130) #12	RRM2 (ENSCAFG00845025952) #13	CYS1 (ENSCAFG00845025907) #14	KLF11 (ENSCAFG00845025845) #15	GRHL1 (ENSCAFG00845025614) #16	TAF1B (ENSCAFG00845025510) #17	YWHAQ (ENSCAFG00845025457) #18	ADAM17 (ENSCAFG00845024728) #19	IAH1 (ENSCAFG00845024429) #20	CPSF3 (ENSCAFG00845024218) #21	ITGB1BP1 (ENSCAFG00845024064) #22	ASAP2 (ENSCAFG00845023702) #23	MBOAT2 (ENSCAFG00845023611) #25	KIDINS220 (ENSCAFG00845023013) #26	ID2 (ENSCAFG00845022749) #27	RNF144A (ENSCAFG00845022407) #29	RSAD2 (ENSCAFG00845022316) #30	CMPK2 (ENSCAFG00845022277) #31	SOX11 (ENSCAFG00845022195) #32	DCDC2C (ENSCAFG00845022069) #33	ALLC (ENSCAFG00845021988) #34	COLEC11 (ENSCAFG00845021783) #35	RPS7 (ENSCAFG00845021596) ##36	RNASEH1 (ENSCAFG00845021474) #37	ADI1 (ENSCAFG00845021388)	TRAPPC12 (ENSCAFG00845021304)
Dingo	MODERN SPECIES	223	KCNF1 (ENSCAFG00020026713) #7	PDIA6 (ENSCAFG00020026714) #8	ATP6V1C2 (ENSCAFG00020026718) #9	NOL10 (ENSCAFG00020026722) #10	ODC1 (ENSCAFG00020026728) #11	HPCAL1 (ENSCAFG00020026737) #12	RRM2 (ENSCAFG00020026744) #13	CYS1 (ENSCAFG00020026758) #14	KLF11 (ENSCAFG00020026763) #15	GRHL1 (ENSCAFG00020026767) #16	TAF1B (ENSCAFG00020026787) #17	YWHAQ (ENSCAFG00020026795) #18	ENSCAFG00020026796 #19	IAH1 (ENSCAFG00020026797) #20	CPSF3 (ENSCAFG00020026799) #21	ITGB1BP1 (ENSCAFG00020000149) #22	ASAP2 (ENSCAFG00020000377) #23	MBOAT2 (ENSCAFG00020001936) #25	KIDINS220 (ENSCAFG00020002173) #26	ID2 (ENSCAFG00020004823) #27	RNF144A (ENSCAFG00020004868) #29	RSAD2 (ENSCAFG00020004883) #30	ENSCAFG00020004906	SOX11 (ENSCAFG00020004918) #32	DCDC2C (ENSCAFG00020004927) #33	ALLC (ENSCAFG00020004959) #34	COLEC11 (ENSCAFG00020004967) #35	RNASEH1 (ENSCAFG00020004994) #37	ADI1 (ENSCAFG00020005017)	TRAPPC12 (ENSCAFG00020005019)	EIPR1 (ENSCAFG00020005053)
Eulipotyphla	ANCESTRAL SPECIES	2071																ENSGT00390000003990 #22	ENSGT00940000155623 #23
Hedgehog	MODERN SPECIES	4693															CPSF3 (ENSEEUG00000015422) #21	ITGB1BP1 (ENSEEUG00000015370) #22	ASAP2 (ENSEEUG00000015225) #23
Common shrew	MODERN SPECIES	3630																ITGB1BP1 (ENSSARG00000009799) #22	ENSSARG00000009714 #23
Atlantogenata	ANCESTRAL SPECIES	14	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT01050000247847	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000014122.j ##36	ENSGT00390000003466 #37	ENSGT00390000008195
Xenarthra	ANCESTRAL SPECIES	395										ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27
Armadillo	MODERN SPECIES	1449							ENSDNOG00000012581	ENSDNOG00000047738	KLF11 (ENSDNOG00000035689) #15	GRHL1 (ENSDNOG00000014493) #16	TAF1B (ENSDNOG00000018268) #17	ENSDNOG00000033666	ADAM17 (ENSDNOG00000009284) #19	IAH1 (ENSDNOG00000009272) #20	CPSF3 (ENSDNOG00000008940) #21	ITGB1BP1 (ENSDNOG00000008930) #22	ASAP2 (ENSDNOG00000008886) #23	ENSDNOG00000041786	MBOAT2 (ENSDNOG00000041557) #25	KIDINS220 (ENSDNOG00000002905) #26	ID2 (ENSDNOG00000035918) #27	ENSDNOG00000042784
Sloth	MODERN SPECIES	4158																ITGB1BP1 (ENSCHOG00000013602) #22	ASAP2 (ENSCHOG00000013552) #23
Afrotheria	ANCESTRAL SPECIES	26	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT01050000247847	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00940000162396 #33	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000014122.j ##36	ENSGT00390000003466 #37	ENSGT00390000008195
Tenrec	MODERN SPECIES	4531													ADAM17 (ENSETEG00000003902) #19	IAH1 (ENSETEG00000003899) #20	CPSF3 (ENSETEG00000003893) #21	ITGB1BP1 (ENSETEG00000003890) #22	ASAP2 (ENSETEG00000003881) #23
Afrotheria_a	ANCESTRAL SPECIES	26	ENSGT00940000160213 #7	ENSGT00940000155646 #8	ENSGT00390000004263.b #9	ENSGT00390000007900 #10	ENSGT00950000182995.e.a.a.a #11	ENSGT00940000154645.A #12	ENSGT00390000013305.a.a #13	ENSGT01050000247847	ENSGT00940000155982 #15	ENSGT00940000157612 #16	ENSGT00440000033827 #17	ENSGT01090000260040.b.b.b.b.a.a #18	ENSGT00940000155443 #19	ENSGT00390000008069 #20	ENSGT00940000155699 #21	ENSGT00390000003990 #22	ENSGT00940000155623 #23	ENSGT01030000234564.a.a.a.a.b #25	ENSGT00940000156714 #26	ENSGT00940000156464 #27	ENSGT00940000157701 #29	ENSGT00390000013670 #30	ENSGT00940000154030.a.b #31	ENSGT00940000161652 #32	ENSGT00390000001793 #34	ENSGT00940000159468 #35	ENSGT00390000014122.i.b.a.b #36	ENSGT00390000014122.j ##36	ENSGT00390000003466 #37	ENSGT00390000008195	ENSGT00390000002448
Elephant	MODERN SPECIES	197	KCNF1 (ENSLAFG00000008774) #7	PDIA6 (ENSLAFG00000012281) #8	ATP6V1C2 (ENSLAFG00000022630) #9	NOL10 (ENSLAFG00000010489) #10	ODC1 (ENSLAFG00000005330) #11	HPCAL1 (ENSLAFG00000004069) #12	RRM2 (ENSLAFG00000003627) #13	ENSLAFG00000026037	KLF11 (ENSLAFG00000032182) #15	GRHL1 (ENSLAFG00000009330) #16	TAF1B (ENSLAFG00000000782) #17	YWHAQ (ENSLAFG00000009482) #18	ADAM17 (ENSLAFG00000009473) #19	IAH1 (ENSLAFG00000009469) #20	CPSF3 (ENSLAFG00000009467) #21	ITGB1BP1 (ENSLAFG00000009036) #22	ASAP2 (ENSLAFG00000009029) #23	MBOAT2 (ENSLAFG00000008586) #25	KIDINS220 (ENSLAFG00000014141) #26	ID2 (ENSLAFG00000006910) #27	RNF144A (ENSLAFG00000001936) #29	RSAD2 (ENSLAFG00000017097) #30	CMPK2 (ENSLAFG00000031856) #31	SOX11 (ENSLAFG00000006327) #32	ENSLAFG00000026156	ENSLAFG00000027245	ALLC (ENSLAFG00000013751) #34	COLEC11 (ENSLAFG00000021841) #35	RPS7 (ENSLAFG00000015087) #36	RNASEH1 (ENSLAFG00000015091) #37	ADI1 (ENSLAFG00000004902)
Hyrax	MODERN SPECIES	3815																ITGB1BP1 (ENSPCAG00000005976) #22	ASAP2 (ENSPCAG00000005743) #23