Mus	ANCESTRAL SPECIES	3	ENSGT00390000018302 #7	ENSGT00940000158362 #8	ENSGT00530000063474.A #9	ENSGT00510000047220 #10	ENSGT00940000153167.B #11	ENSGT00940000158765 #12	ENSGT00940000163965 #13	ENSGT00390000003464 #14	ENSGT00940000154277.a.b.b #15	ENSGT00940000156539 #16	ENSGT00390000016650 #17	ENSGT00390000006459 #18	ENSGT00420000029753.b #19	ENSGT00390000015318 #20	ENSGT00940000158629 #21	ENSGT00940000155705.b #22	ENSGT00940000156259.b #23	ENSGT00700000106049 #25	ENSGT00940000158851 #26	ENSGT00530000063632.A #28	ENSGT00530000063790.a #27	ENSGT00940000156897 #29	ENSGT00390000015908 #30	ENSGT00390000003860 #31	ENSGT00500000045816 #32	ENSGT00940000153665.b.a.b	ENSGT00940000161237 #33	ENSGT00940000155505.a #34	ENSGT00390000008086 #35	ENSGT00400000024146 #36	ENSGT00940000162886 #37
Mus_A	ANCESTRAL SPECIES	3	ENSGT00390000018302 #7	ENSGT00940000158362 #8	ENSGT00530000063474.A #9	ENSGT00510000047220 #10	ENSGT00940000153167.B #11	ENSGT00940000158765 #12	ENSGT00940000163965 #13	ENSGT00390000003464 #14	ENSGT00940000154277.a.b.b #15	ENSGT00940000156539 #16	ENSGT00390000016650 #17	ENSGT00390000006459 #18	ENSGT00420000029753.b #19	ENSGT00390000015318 #20	ENSGT00940000158629 #21	ENSGT00940000155705.b #22	ENSGT00940000156259.b #23	ENSGT00700000106049 #25	ENSGT00940000158851 #26	ENSGT00530000063632.A #28	ENSGT00530000063790.a #27	ENSGT00940000156897 #29	ENSGT00390000015908 #30	ENSGT00390000003860 #31	ENSGT00500000045816 #32	ENSGT00940000153665.b.a.b	ENSGT00940000161237 #33	ENSGT00940000155505.a #34	ENSGT00390000008086 #35	ENSGT00400000024146 #36	ENSGT00940000162886 #37
Mus_B	ANCESTRAL SPECIES	5	ENSGT00390000018302 #7	ENSGT00940000158362 #8	ENSGT00530000063474.A #9	ENSGT00510000047220 #10	ENSGT00940000153167.B #11	ENSGT00940000158765 #12	ENSGT00940000163965 #13	ENSGT00390000003464 #14	ENSGT00940000154277.a.b.b #15	ENSGT00940000156539 #16	ENSGT00390000016650 #17	ENSGT00390000006459 #18	ENSGT00420000029753.b #19	ENSGT00390000015318 #20	ENSGT00940000158629 #21	ENSGT00940000155705.b #22	ENSGT00940000156259.b #23	ENSGT00700000106049 #25	ENSGT00940000158851 #26	ENSGT00530000063632.A #28	ENSGT00530000063790.a #27	ENSGT00940000156897 #29	ENSGT00390000015908 #30	ENSGT00390000003860 #31	ENSGT00500000045816 #32	ENSGT00940000153665.b.a.b	ENSGT00940000161237 #33	ENSGT00940000155505.a #34	ENSGT00390000008086 #35	ENSGT00400000024146 #36	ENSGT00940000162886 #37
Mouse	MODERN SPECIES	13	Urod (ENSMUSG00000028684) #7	Zswim5 (ENSMUSG00000033948) #8	Hpdl (ENSMUSG00000043155) #9	Mutyh (ENSMUSG00000028687) #10	Toe1 (ENSMUSG00000028688) #11	Tesk2 (ENSMUSG00000033985) #12	Ccdc163 (ENSMUSG00000028689) #13	Mmachc (ENSMUSG00000028690) #14	Prdx1 (ENSMUSG00000028691) #15	Akr1a1 (ENSMUSG00000028692) #16	Nasp (ENSMUSG00000028693) #17	Ccdc17 (ENSMUSG00000034035) #18	Gpbp1l1 (ENSMUSG00000034042) #19	Tmem69 (ENSMUSG00000055900) #20	Ipp (ENSMUSG00000028696) #21	Mast2 (ENSMUSG00000003810) #22	Pik3r3 (ENSMUSG00000028698) #23	Gm49337 (ENSMUSG00000111410) #24	P3r3urf (ENSMUSG00000078593) #25	Tspan1 (ENSMUSG00000028699) #26	Lurap1 (ENSMUSG00000028701) #27	Pomgnt1 (ENSMUSG00000028700) #28	Rad54l (ENSMUSG00000028702) #29	Lrrc41 (ENSMUSG00000028703) #30	Uqcrh (ENSMUSG00000063882) #31	Nsun4 (ENSMUSG00000028706) #32	Faah (ENSMUSG00000034171) #33	Dmbx1 (ENSMUSG00000028707) #34	Tmem275 (ENSMUSG00000034185) #35	Kncn (ENSMUSG00000073774) #36	Mknk1 (ENSMUSG00000028708) #37
Mus_C	ANCESTRAL SPECIES	2	ENSGT00390000018302 #7	ENSGT00940000158362 #8	ENSGT00530000063474.A #9	ENSGT00510000047220 #10	ENSGT00940000153167.B #11	ENSGT00940000158765 #12	ENSGT00940000163965 #13	ENSGT00390000003464 #14	ENSGT00940000154277.a.b.b #15	ENSGT00940000156539 #16	ENSGT00390000016650 #17	ENSGT00390000006459 #18	ENSGT00420000029753.b #19	ENSGT00390000015318 #20	ENSGT00940000158629 #21	ENSGT00940000155705.b #22	ENSGT00940000156259.b #23	ENSGT00700000106049 #25	ENSGT00940000158851 #26	ENSGT00530000063632.A #28	ENSGT00530000063790.a #27	ENSGT00940000156897 #29	ENSGT00390000015908 #30	ENSGT00390000003860 #31	ENSGT00500000045816 #32	ENSGT00940000153665.b.a.b	ENSGT00940000161237 #33	ENSGT00940000155505.a #34	ENSGT00390000008086 #35	ENSGT00400000024146 #36	ENSGT00940000162886 #37
spretus	MODERN SPECIES	13	Urod (MGP_SPRETEiJ_G0027318) #7	Zswim5 (MGP_SPRETEiJ_G0027317) #8	Hpdl (MGP_SPRETEiJ_G0027316) #9	Mutyh (MGP_SPRETEiJ_G0027315) #10	Toe1 (MGP_SPRETEiJ_G0027314) #11	Tesk2 (MGP_SPRETEiJ_G0027313) #12	Ccdc163 (MGP_SPRETEiJ_G0027312) #13	Mmachc (MGP_SPRETEiJ_G0027311) #14	Prdx1 (MGP_SPRETEiJ_G0027310) #15	Akr1a1 (MGP_SPRETEiJ_G0027309) #16	Nasp (MGP_SPRETEiJ_G0027308) #17	Ccdc17 (MGP_SPRETEiJ_G0027307) #18	Gpbp1l1 (MGP_SPRETEiJ_G0027306) #19	Tmem69 (MGP_SPRETEiJ_G0027305) #20	Ipp (MGP_SPRETEiJ_G0027304) #21	Mast2 (MGP_SPRETEiJ_G0027303) #22	Pik3r3 (MGP_SPRETEiJ_G0027302) #23	P3r3urf (MGP_SPRETEiJ_G0027301) #25	Tspan1 (MGP_SPRETEiJ_G0027300) #26	Lurap1 (MGP_SPRETEiJ_G0027299) #27	Pomgnt1 (MGP_SPRETEiJ_G0027298) #28	Rad54l (MGP_SPRETEiJ_G0027297) #29	Lrrc41 (MGP_SPRETEiJ_G0027296) #30	Uqcrh (MGP_SPRETEiJ_G0027295) #31	Nsun4 (MGP_SPRETEiJ_G0027294) #32	Faah (MGP_SPRETEiJ_G0027293) #33	Dmbx1 (MGP_SPRETEiJ_G0027292) #34	Tmem275 (MGP_SPRETEiJ_G0027291) #35	Kncn (MGP_SPRETEiJ_G0027290) #36	Mknk1 (MGP_SPRETEiJ_G0027289) #37	Mob3c (MGP_SPRETEiJ_G0027288)
Steppe mouse	MODERN SPECIES	2908		ENSMSIG00000013143	Hpdl (ENSMSIG00000013157) #9	Mutyh (ENSMSIG00000013163) #10	Toe1 (ENSMSIG00000013201) #11	Tesk2 (ENSMSIG00000013275) #12	Ccdc163 (ENSMSIG00000013392) #13	Mmachc (ENSMSIG00000013741) #14	ENSMSIG00000013776 #15	ENSMSIG00000013830 #16	Nasp (ENSMSIG00000013861) #17	Gpbp1l1 (ENSMSIG00000014139) #19	ENSMSIG00000014178	Tmem69 (ENSMSIG00000014197) #20	Ipp (ENSMSIG00000014220) #21	Mast2 (ENSMSIG00000014279) #22	ENSMSIG00000014744	Pik3r3 (ENSMSIG00000014768) #23	P3r3urf (ENSMSIG00000014803) #25	Tspan1 (ENSMSIG00000014810) #26	Pomgnt1 (ENSMSIG00000014833) #28	Lurap1 (ENSMSIG00000014888) #27	Rad54l (ENSMSIG00000014901) #29	Lrrc41 (ENSMSIG00000014928) #30	ENSMSIG00000014983 #31	ENSMSIG00000015002	ENSMSIG00000015007	ENSMSIG00000015016	Faah (ENSMSIG00000015049) #33	Dmbx1 (ENSMSIG00000015099) #34	Tmem275 (ENSMSIG00000015119) #35
Ryukyu mouse	MODERN SPECIES	13	Urod (MGP_CAROLIEiJ_G0026346) #7	Zswim5 (MGP_CAROLIEiJ_G0026345) #8	Hpdl (MGP_CAROLIEiJ_G0026344) #9	Mutyh (MGP_CAROLIEiJ_G0026343) #10	Toe1 (MGP_CAROLIEiJ_G0026342) #11	Tesk2 (MGP_CAROLIEiJ_G0026341) #12	Ccdc163 (MGP_CAROLIEiJ_G0026340) #13	Mmachc (MGP_CAROLIEiJ_G0026339) #14	Prdx1 (MGP_CAROLIEiJ_G0026338) #15	Akr1a1 (MGP_CAROLIEiJ_G0026337) #16	Nasp (MGP_CAROLIEiJ_G0026336) #17	Ccdc17 (MGP_CAROLIEiJ_G0026335) #18	Gpbp1l1 (MGP_CAROLIEiJ_G0026334) #19	Tmem69 (MGP_CAROLIEiJ_G0026333) #20	Ipp (MGP_CAROLIEiJ_G0026332) #21	Mast2 (MGP_CAROLIEiJ_G0026331) #22	Pik3r3 (MGP_CAROLIEiJ_G0026330) #23	P3r3urf (MGP_CAROLIEiJ_G0026329) #25	Tspan1 (MGP_CAROLIEiJ_G0026328) #26	Lurap1 (MGP_CAROLIEiJ_G0026327) #27	Pomgnt1 (MGP_CAROLIEiJ_G0026326) #28	Rad54l (MGP_CAROLIEiJ_G0026325) #29	Lrrc41 (MGP_CAROLIEiJ_G0026324) #30	Uqcrh (MGP_CAROLIEiJ_G0026323) #31	Nsun4 (MGP_CAROLIEiJ_G0026322) #32	Faah (MGP_CAROLIEiJ_G0026321) #33	Dmbx1 (MGP_CAROLIEiJ_G0026320) #34	Tmem275 (MGP_CAROLIEiJ_G0026319) #35	Kncn (MGP_CAROLIEiJ_G0026318) #36	Mknk1 (MGP_CAROLIEiJ_G0026317) #37	Mob3c (MGP_CAROLIEiJ_G0026316)
Shrew mouse	MODERN SPECIES	19	Urod (MGP_PahariEiJ_G0028678) #7	Zswim5 (MGP_PahariEiJ_G0028677) #8	Hpdl (MGP_PahariEiJ_G0028676) #9	Mutyh (MGP_PahariEiJ_G0028675) #10	Toe1 (MGP_PahariEiJ_G0028674) #11	Tesk2 (MGP_PahariEiJ_G0028673) #12	Ccdc163 (MGP_PahariEiJ_G0028672) #13	Mmachc (MGP_PahariEiJ_G0028671) #14	Prdx1 (MGP_PahariEiJ_G0028670) #15	Akr1a1 (MGP_PahariEiJ_G0028669) #16	Nasp (MGP_PahariEiJ_G0028668) #17	Ccdc17 (MGP_PahariEiJ_G0028667) #18	Gpbp1l1 (MGP_PahariEiJ_G0028666) #19	Tmem69 (MGP_PahariEiJ_G0028665) #20	Ipp (MGP_PahariEiJ_G0028664) #21	Mast2 (MGP_PahariEiJ_G0028663) #22	Pik3r3 (MGP_PahariEiJ_G0028662) #23	P3r3urf (MGP_PahariEiJ_G0028661) #25	Tspan1 (MGP_PahariEiJ_G0028660) #26	Pomgnt1 (MGP_PahariEiJ_G0028659) #28	Lurap1 (MGP_PahariEiJ_G0028658) #27	Rad54l (MGP_PahariEiJ_G0028657) #29	Lrrc41 (MGP_PahariEiJ_G0028656) #30	Uqcrh (MGP_PahariEiJ_G0028655) #31	Nsun4 (MGP_PahariEiJ_G0028654) #32	Faah (MGP_PahariEiJ_G0028653) #33	Dmbx1 (MGP_PahariEiJ_G0028652) #34	Tmem275 (MGP_PahariEiJ_G0028651) #35	Kncn (MGP_PahariEiJ_G0028650) #36	Mknk1 (MGP_PahariEiJ_G0028649) #37	Mob3c (MGP_PahariEiJ_G0028648)