Muroidea_A	ANCESTRAL SPECIES	10	ENSGT00940000154628.B #7	ENSGT00940000162682.A.a.b	ENSGT00940000155540.b.b #8	ENSGT00950000182869.e.a.a.f.b #9	ENSGT00390000004409 #10	ENSGT00390000014618.a #11	ENSGT00940000153289.a.a.a #12	ENSGT00900000143356	ENSGT00940000154935 #13	ENSGT00940000155303 #14	ENSGT00930000151028 #16	ENSGT00390000000153.l.a #17	ENSGT01030000234539.b.b.b #18	ENSGT00940000156008 #19	ENSGT00390000008264 #20	ENSGT00940000156914 #22	ENSGT00390000017848 #25	ENSGT00390000016042 #27	ENSGT00520000058758	ENSGT00940000154537	ENSGT00940000157660 #28	ENSGT00390000005529.a #30	ENSGT00940000156297 #31	ENSGT00940000157205 #32	ENSGT00940000154280 #33	ENSGT00940000156550 #34	ENSGT00940000156624 #35	ENSGT00940000156780 #36	ENSGT00940000156669.b #37	ENSGT00940000158385	ENSGT00530000063735.a
Murinae	ANCESTRAL SPECIES	26	ENSGT00940000160190	ENSGT00940000154628.B #7	ENSGT00940000155540.b.b #8	ENSGT00950000182869.e.a.a.f.b #9	ENSGT00390000004409 #10	ENSGT00390000014618.a #11	ENSGT00940000153289.a.a.a #12	ENSGT00900000143356	ENSGT00940000154935 #13	ENSGT00940000155303 #14	ENSGT00930000151028 #16	ENSGT00390000000153.l.a #17	ENSGT01030000234539.b.b.b #18	ENSGT00940000156008 #19	ENSGT00390000008264 #20	ENSGT00940000156914 #22	ENSGT00390000017848 #25	ENSGT00390000016042 #27	ENSGT00520000058758	ENSGT00940000154537	ENSGT00940000157660 #28	ENSGT00390000005529.a #30	ENSGT00940000156297 #31	ENSGT00940000157205 #32	ENSGT00940000154280 #33	ENSGT00940000156550 #34	ENSGT00940000156624 #35	ENSGT00940000156780 #36	ENSGT00940000156669.b #37	ENSGT00940000158385	ENSGT00530000063735.a
Mus	ANCESTRAL SPECIES	8	ENSGT00940000157372	ENSGT00940000160190	ENSGT00940000154628.B #7	ENSGT00940000155540.b.b #8	ENSGT00950000182869.e.a.a.f.b #9	ENSGT00390000004409 #10	ENSGT00390000014618.a #11	ENSGT00940000153289.a.a.a #12	ENSGT00940000154935 #13	ENSGT00940000155303 #14	ENSGT00930000151028 #16	ENSGT00390000000153.l.a #17	ENSGT01030000234539.b.b.b #18	ENSGT00940000156008 #19	ENSGT00390000008264 #20	ENSGT00940000156914 #22	ENSGT00390000017848 #25	ENSGT00390000016042 #27	ENSGT00520000058758	ENSGT00940000154537	ENSGT00940000157660 #28	ENSGT00390000005529.a #30	ENSGT00940000156297 #31	ENSGT00940000157205 #32	ENSGT00940000154280 #33	ENSGT00940000156550 #34	ENSGT00940000156624 #35	ENSGT00940000156780 #36	ENSGT00940000156669.b #37	ENSGT00940000158385	ENSGT00530000063735.a
Mus_A	ANCESTRAL SPECIES	12	ENSGT00940000160190	ENSGT00940000154628.B #7	ENSGT00940000155540.b.b #8	ENSGT00950000182869.e.a.a.f.b.j #9	ENSGT00390000004409 #10	ENSGT00390000014618.a #11	ENSGT00940000153289.a.a.a #12	ENSGT00940000154935 #13	ENSGT00940000155303 #14	ENSGT00860000136364 #15	ENSGT00930000151028 #16	ENSGT00390000000153.l.a #17	ENSGT01030000234539.b.b.b #18	ENSGT00940000156008 #19	ENSGT00390000008264 #20	ENSGT00940000156914 #22	ENSGT00390000017848 #25	ENSGT00390000016042 #27	ENSGT00520000058758	ENSGT00940000154537	ENSGT00940000157660 #28	ENSGT00390000008294.e.a.w.b #29	ENSGT00390000005529.a #30	ENSGT00940000156297 #31	ENSGT00940000157205 #32	ENSGT00940000154280 #33	ENSGT00940000156550 #34	ENSGT00940000156624 #35	ENSGT00940000156780 #36	ENSGT00940000156669.b #37	ENSGT00940000158385
Ryukyu mouse	MODERN SPECIES	5	Dusp13 (MGP_CAROLIEiJ_G0019007) #7	Samd8 (MGP_CAROLIEiJ_G0019008) #8	Vdac2 (MGP_CAROLIEiJ_G0019009) #9	Comtd1 (MGP_CAROLIEiJ_G0019010) #10	Zfp503 (MGP_CAROLIEiJ_G0019011) #11	Lrmda (MGP_CAROLIEiJ_G0019012) #12	Kcnma1 (MGP_CAROLIEiJ_G0019013) #13	Dlg5 (MGP_CAROLIEiJ_G0019014) #14	MGP_CAROLIEiJ_G0019015 #15	Polr3a (MGP_CAROLIEiJ_G0019016) #16	Rps24 (MGP_CAROLIEiJ_G0019017) #17	Zmiz1 (MGP_CAROLIEiJ_G0019018) #18	Ppif (MGP_CAROLIEiJ_G0019019) #19	Zcchc24 (MGP_CAROLIEiJ_G0019020) #20	MGP_CAROLIEiJ_G0019021 #21	Anxa11 (MGP_CAROLIEiJ_G0019022) #22	MGP_CAROLIEiJ_G0019023 #23	MGP_CAROLIEiJ_G0019024 #24	MGP_CAROLIEiJ_G0019025 #25	MGP_CAROLIEiJ_G0019026 #26	MGP_CAROLIEiJ_G0019027 #27	Slmap (MGP_CAROLIEiJ_G0019028) #28	MGP_CAROLIEiJ_G0019029 #29	Dennd6a (MGP_CAROLIEiJ_G0019030) #30	Arf4 (MGP_CAROLIEiJ_G0019031) #31	Pde12 (MGP_CAROLIEiJ_G0019032) #32	MGP_CAROLIEiJ_G0019033 #33	Asb14 (MGP_CAROLIEiJ_G0019034) #34	Appl1 (MGP_CAROLIEiJ_G0019035) #35	Hesx1 (MGP_CAROLIEiJ_G0019036) #36	Il17rd (MGP_CAROLIEiJ_G0019037) #37
Mus_B	ANCESTRAL SPECIES	11	ENSGT00940000160190	ENSGT00940000154628.B #7	ENSGT00940000155540.b.b #8	ENSGT00950000182869.e.a.a.f.b.j #9	ENSGT00390000004409 #10	ENSGT00390000014618.a #11	ENSGT00940000153289.a.a.a #12	ENSGT00940000154935 #13	ENSGT00940000155303 #14	ENSGT00860000136364 #15	ENSGT00930000151028 #16	ENSGT00390000000153.l.a #17	ENSGT01030000234539.b.b.b #18	ENSGT00940000156008 #19	ENSGT00390000008264 #20	ENSGT00940000156914 #22	ENSGT00390000017848 #25	ENSGT00390000016042 #27	ENSGT00520000058758	ENSGT00940000154537	ENSGT00940000157660 #28	ENSGT00390000008294.e.a.w.b #29	ENSGT00390000005529.a #30	ENSGT00940000156297 #31	ENSGT00940000157205 #32	ENSGT00940000154280 #33	ENSGT00940000156550 #34	ENSGT00940000156624 #35	ENSGT00940000156780 #36	ENSGT00940000156669.b #37	ENSGT00940000158385
Mouse	MODERN SPECIES	5	Kat6b (ENSMUSG00000021767)	Dusp29 (ENSMUSG00000063821)	Dusp13 (ENSMUSG00000021768) #7	Samd8 (ENSMUSG00000021770) #8	Vdac2 (ENSMUSG00000021771) #9	Comtd1 (ENSMUSG00000021773) #10	Zfp503 (ENSMUSG00000039081) #11	Lrmda (ENSMUSG00000063458) #12	Kcnma1 (ENSMUSG00000063142) #13	Dlg5 (ENSMUSG00000021782) #14	Polr3a (ENSMUSG00000025280) #16	Rps24 (ENSMUSG00000025290) #17	Zmiz1 (ENSMUSG00000007817) #18	Ppif (ENSMUSG00000021868) #19	Zcchc24 (ENSMUSG00000055538) #20	Anxa11 (ENSMUSG00000021866) #22	Plac9 (ENSMUSG00000095304) #25	Tmem254 (ENSMUSG00000072676) #27	Cphx1 (ENSMUSG00000095975)	Duxbl1 (ENSMUSG00000048502)	Slmap (ENSMUSG00000021870) #28	Dennd6a (ENSMUSG00000040818) #30	Arf4 (ENSMUSG00000021877) #31	Pde12 (ENSMUSG00000043702) #32	Dnah12 (ENSMUSG00000021879) #33	Asb14 (ENSMUSG00000021898) #34	Appl1 (ENSMUSG00000040760) #35	Hesx1 (ENSMUSG00000040726) #36	Il17rd (ENSMUSG00000040717) #37	Arhgef3 (ENSMUSG00000021895)	Tasor (ENSMUSG00000040651)
Mus_C	ANCESTRAL SPECIES	26	ENSGT00940000160190	ENSGT00940000154628.B #7	ENSGT00940000155540.b.b #8	ENSGT00950000182869.e.a.a.f.b.j #9	ENSGT00390000004409 #10	ENSGT00390000014618.a #11	ENSGT00940000153289.a.a.a #12	ENSGT00940000154935 #13	ENSGT00940000155303 #14	ENSGT00860000136364 #15	ENSGT00930000151028 #16	ENSGT00390000000153.l.b.c.a ##17	ENSGT01030000234539.b.b.b #18	ENSGT00940000156008 #19	ENSGT00390000008264 #20	ENSGT00940000156914 #22	ENSGT00390000017848 #25	ENSGT00390000016042 #27	ENSGT00520000058758	ENSGT00940000154537	ENSGT00940000157660 #28	ENSGT00390000008294.e.a.w.b #29	ENSGT00390000005529.a #30	ENSGT00940000156297 #31	ENSGT00940000157205 #32	ENSGT00940000154280 #33	ENSGT00940000156550 #34	ENSGT00940000156624 #35	ENSGT00940000156780 #36	ENSGT00940000156669.b #37	ENSGT00950000182869.e.b.b ##9
Steppe mouse	MODERN SPECIES	275																Anxa11 (ENSMSIG00000026525) #22	Plac9 (ENSMSIG00000026558) #25	Tmem254 (ENSMSIG00000026609) #27	Cphx1 (ENSMSIG00000026692)	Duxbl1 (ENSMSIG00000026714)	ENSMSIG00000026746	Slmap (ENSMSIG00000026772) #28	ENSMSIG00000027380 #29	Dennd6a (ENSMSIG00000027390) #30	Arf4 (ENSMSIG00000027424) #31	Pde12 (ENSMSIG00000027439) #32	Dnah12 (ENSMSIG00000027454) #33	Asb14 (ENSMSIG00000027841) #34	Appl1 (ENSMSIG00000027855) #35	Hesx1 (ENSMSIG00000027875) #36	Il17rd (ENSMSIG00000027878) #37
spretus	MODERN SPECIES	5	Dusp29 (MGP_SPRETEiJ_G0019884)	Dusp13 (MGP_SPRETEiJ_G0019885) #7	Samd8 (MGP_SPRETEiJ_G0019886) #8	Vdac2 (MGP_SPRETEiJ_G0019887) #9	Comtd1 (MGP_SPRETEiJ_G0019888) #10	Zfp503 (MGP_SPRETEiJ_G0019889) #11	Lrmda (MGP_SPRETEiJ_G0019890) #12	Kcnma1 (MGP_SPRETEiJ_G0019891) #13	Dlg5 (MGP_SPRETEiJ_G0019892) #14	MGP_SPRETEiJ_G0019893 #15	Polr3a (MGP_SPRETEiJ_G0019894) #16	MGP_SPRETEiJ_G0019895 #17	Zmiz1 (MGP_SPRETEiJ_G0019896) #18	Ppif (MGP_SPRETEiJ_G0019897) #19	Zcchc24 (MGP_SPRETEiJ_G0019898) #20	Anxa11 (MGP_SPRETEiJ_G0019899) #22	MGP_SPRETEiJ_G0019900 #25	MGP_SPRETEiJ_G0019901 #25	MGP_SPRETEiJ_G0019902 #25	MGP_SPRETEiJ_G0019903 #27	MGP_SPRETEiJ_G0019904 #27	MGP_SPRETEiJ_G0019905 #27	MGP_SPRETEiJ_G0019906	MGP_SPRETEiJ_G0019907	MGP_SPRETEiJ_G0019908	MGP_SPRETEiJ_G0019910	MGP_SPRETEiJ_G0019909	Slmap (MGP_SPRETEiJ_G0019912) #28	MGP_SPRETEiJ_G0019913 #29	Dennd6a (MGP_SPRETEiJ_G0019914) #30	Arf4 (MGP_SPRETEiJ_G0019915) #31
Shrew mouse	MODERN SPECIES	21	MGP_PahariEiJ_G0030019	Dusp29 (MGP_PahariEiJ_G0030020)	Dusp13 (MGP_PahariEiJ_G0030021) #7	Samd8 (MGP_PahariEiJ_G0030022) #8	Vdac2 (MGP_PahariEiJ_G0030023) #9	Comtd1 (MGP_PahariEiJ_G0030024) #10	Zfp503 (MGP_PahariEiJ_G0030025) #11	Lrmda (MGP_PahariEiJ_G0030026) #12	Kcnma1 (MGP_PahariEiJ_G0030027) #13	Dlg5 (MGP_PahariEiJ_G0030028) #14	Polr3a (MGP_PahariEiJ_G0030029) #16	Rps24 (MGP_PahariEiJ_G0030030) #17	Zmiz1 (MGP_PahariEiJ_G0030031) #18	Ppif (MGP_PahariEiJ_G0030032) #19	Zcchc24 (MGP_PahariEiJ_G0030033) #20	Anxa11 (MGP_PahariEiJ_G0030034) #22	MGP_PahariEiJ_G0030035 #25	MGP_PahariEiJ_G0030036 #25	MGP_PahariEiJ_G0030037 #25	MGP_PahariEiJ_G0030038 #27	MGP_PahariEiJ_G0030039 #27	MGP_PahariEiJ_G0030040	MGP_PahariEiJ_G0030041	MGP_PahariEiJ_G0030042	MGP_PahariEiJ_G0030043	MGP_PahariEiJ_G0030044	MGP_PahariEiJ_G0030045	Slmap (MGP_PahariEiJ_G0030046) #28	Dennd6a (MGP_PahariEiJ_G0030047) #30	Arf4 (MGP_PahariEiJ_G0030048) #31	Pde12 (MGP_PahariEiJ_G0030049) #32
Rat	MODERN SPECIES	7								Polr3a (ENSRNOG00000010008) #16	Rps24 (ENSRNOG00000010189) ##17	ENSRNOG00000070644	Zmiz1 (ENSRNOG00000010488) #18	Ppif (ENSRNOG00000010558) #19	Zcchc24 (ENSRNOG00000040205) #20	LOC103693862 (ENSRNOG00000056629)	ENSRNOG00000064603	Anxa11 (ENSRNOG00000010984) #22	Plac9 (ENSRNOG00000011263) #25	Tmem254 (ENSRNOG00000011276) #27	Cphx1 (ENSRNOG00000025433)	Dux4 (ENSRNOG00000025408)	LOC100911661 (ENSRNOG00000067370)	Slmap (ENSRNOG00000011307) #28	Dennd6a (ENSRNOG00000011636) #30	Arf4 (ENSRNOG00000012623) #31	Pde12 (ENSRNOG00000059442) #32	Dnah12 (ENSRNOG00000059865) #33	Asb14 (ENSRNOG00000013346) #34	Appl1 (ENSRNOG00000013574) #35	Hesx1 (ENSRNOG00000014133) #36	Il17rd (ENSRNOG00000021966) #37	Arhgef3 (ENSRNOG00000014363)
Cricetidae	ANCESTRAL SPECIES	15	ENSGT00940000154628.B #7	ENSGT00940000162682.A.a.b	ENSGT00940000155540.b.b #8	ENSGT00950000182869.e.a.a.f.b #9	ENSGT00390000004409 #10	ENSGT00390000014618.a #11	ENSGT00940000153289.a.a.a #12	ENSGT00900000143356	ENSGT00940000154935 #13	ENSGT00940000155303 #14	ENSGT00930000151028.bb.b #16	ENSGT00390000000153.l.a #17	ENSGT01030000234539.b.b.b #18	ENSGT00940000156008 #19	ENSGT00390000008264 #20	ENSGT00940000156914 #22	ENSGT00390000017848 #25	ENSGT00390000016042 #27	ENSGT00520000058758	ENSGT00940000154537.z	ENSGT00940000157660 #28	ENSGT00390000005529.a #30	ENSGT00940000156297 #31	ENSGT00940000157205 #32	ENSGT00940000154280 #33	ENSGT00940000156550 #34	ENSGT00940000156624 #35	ENSGT00940000156780 #36	ENSGT00940000156669.b #37	ENSGT00940000158385	ENSGT00530000063735.a
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT00940000160190	ENSGT00940000154628.B #7	ENSGT00940000155540.b.b #8	ENSGT00950000182869.e.a.a.f.b #9	ENSGT00390000004409 #10	ENSGT00390000014618.a #11	ENSGT00940000153289.a.a.a #12	ENSGT00900000143356	ENSGT00940000154935 #13	ENSGT00940000155303 #14	ENSGT00930000151028.bb.b #16	ENSGT00390000000153.l.a #17	ENSGT01030000234539.b.b.b #18	ENSGT00940000156008 #19	ENSGT00390000008264 #20	ENSGT00940000156914 #22	ENSGT00390000017848 #25	ENSGT00390000016042 #27	ENSGT00520000058758	ENSGT00940000154537.z	ENSGT00390000017724.a.a	ENSGT00940000156679	ENSGT00390000018500.b	ENSGT00940000155892	ENSGT00940000154791	ENSGT00940000156388	ENSGT00950000182865.a	ENSGT00940000157677	ENSGT00940000153541.B	ENSGT00940000156494	ENSGT00940000157928
Northern American deer mouse	MODERN SPECIES	22	Dusp13 (ENSPEMG00000012475) #7	Samd8 (ENSPEMG00000020777) #8	Vdac2 (ENSPEMG00000020528) #9	Comtd1 (ENSPEMG00000015720) #10	Zfp503 (ENSPEMG00000011642) #11	Lrmda (ENSPEMG00000015468) #12	ENSPEMG00000027529	ENSPEMG00000030855	Kcnma1 (ENSPEMG00000021200) #13	Dlg5 (ENSPEMG00000000028) #14	ENSPEMG00000006768 #16	Rps24 (ENSPEMG00000014749) #17	Zmiz1 (ENSPEMG00000018413) #18	Ppif (ENSPEMG00000022747) #19	Zcchc24 (ENSPEMG00000026551) #20	Anxa11 (ENSPEMG00000005803) #22	Plac9 (ENSPEMG00000023790) #25	Tmem254 (ENSPEMG00000008045) #27	ENSPEMG00000016400	Duxbl1 (ENSPEMG00000024340)	ENSPEMG00000030014	ENSPEMG00000025547 #16	Eaf1 (ENSPEMG00000015934)	Mettl6 (ENSPEMG00000006627)	Sh3bp5 (ENSPEMG00000010547)	Capn7 (ENSPEMG00000015264)	Dnah1 (ENSPEMG00000009939)	Bap1 (ENSPEMG00000004441)	Phf7 (ENSPEMG00000018721)	Sema3g (ENSPEMG00000013600)	Tnnc1 (ENSPEMG00000012039)
Prairie vole	MODERN SPECIES	14	Appl1 (ENSMOCG00000020080) #35	Asb14 (ENSMOCG00000005229) #34	ENSMOCG00000021714 #33	ENSMOCG00000005104	ENSMOCG00000010627 #33	ENSMOCG00000013173 #33	Pde12 (ENSMOCG00000020734) #32	ENSMOCG00000001505 #31	Dennd6a (ENSMOCG00000007569) #30	Slmap (ENSMOCG00000022562) #28	Polr3a (ENSMOCG00000012185) #16	Rps24 (ENSMOCG00000018968) #17	Zmiz1 (ENSMOCG00000020382) #18	Ppif (ENSMOCG00000018006) #19	Zcchc24 (ENSMOCG00000022142) #20	Anxa11 (ENSMOCG00000022761) #22	Plac9 (ENSMOCG00000022874) #25	Tmem254 (ENSMOCG00000008162) #27	Duxbl1 (ENSMOCG00000009549)	Eaf1 (ENSMOCG00000016000)	Mettl6 (ENSMOCG00000017391)	Sh3bp5 (ENSMOCG00000019047)	Capn7 (ENSMOCG00000020566)	Dnah1 (ENSMOCG00000007684)	Bap1 (ENSMOCG00000013939)	Phf7 (ENSMOCG00000016623)	Sema3g (ENSMOCG00000005022)	Tnnc1 (ENSMOCG00000002938)	ENSMOCG00000017988	ENSMOCG00000012665	Stab1 (ENSMOCG00000019424)
Cricetinae	ANCESTRAL SPECIES	47										ENSGT00940000161714.b	ENSGT00930000151028.bb.a #16	ENSGT00390000000153.l.a #17	ENSGT01030000234539.b.b.b #18	ENSGT00940000156008 #19	ENSGT00390000008264 #20	ENSGT00940000156914 #22	ENSGT00390000017848 #25	ENSGT00390000016042 #27	ENSGT00940000154537.z	ENSGT00940000157660 #28	ENSGT00390000005529.a #30	ENSGT00940000156297 #31	ENSGT00940000157205 #32	ENSGT00940000154280 #33	ENSGT00940000156550 #34	ENSGT00940000156624 #35	ENSGT00940000156780 #36	ENSGT00940000156669.b #37	ENSGT00940000158385	ENSGT00530000063735.a	ENSGT00390000012411
Chinese hamster chok1gshd	MODERN SPECIES	76											ENSCGRG00001015599 #16	Rps24 (ENSCGRG00001012180) #17	Zmiz1 (ENSCGRG00001013752) #18	Ppif (ENSCGRG00001021457) #19	Zcchc24 (ENSCGRG00001021075) #20	Anxa11 (ENSCGRG00001008189) #22	Plac9 (ENSCGRG00001010798) #25	Tmem254 (ENSCGRG00001023811) #27	Duxbl1 (ENSCGRG00001017348)	Slmap (ENSCGRG00001024198) #28	Dennd6a (ENSCGRG00001021471) #30	Arf4 (ENSCGRG00001004744) #31	Pde12 (ENSCGRG00001021836) #32	ENSCGRG00001000070 #33	ENSCGRG00001013441 #33	Asb14 (ENSCGRG00001022870) #34	Appl1 (ENSCGRG00001015615) #35	Hesx1 (ENSCGRG00001024571) #36	Il17rd (ENSCGRG00001018167) #37	Arhgef3 (ENSCGRG00001006619)	Tasor (ENSCGRG00001023504)
Golden Hamster	MODERN SPECIES	803											Nlrp2 (ENSMAUG00000015789)	Polr3a (ENSMAUG00000016247) #16	ENSMAUG00000003646	Ppif (ENSMAUG00000019533) #19	Zcchc24 (ENSMAUG00000016450) #20	Anxa11 (ENSMAUG00000009705) #22	Plac9 (ENSMAUG00000001932) #25	Tmem254 (ENSMAUG00000010787) #27	ENSMAUG00000015071	ENSMAUG00000009139	ENSMAUG00000007867	Sh3bp5 (ENSMAUG00000010671)	Capn7 (ENSMAUG00000019335)	ENSMAUG00000013275	ENSMAUG00000016506	Bap1 (ENSMAUG00000013459)	Phf7 (ENSMAUG00000014188)	Sema3g (ENSMAUG00000000962)	Tnnc1 (ENSMAUG00000018023)	Nisch (ENSMAUG00000011330)	Stab1 (ENSMAUG00000001222)