Rodentia ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 #25 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Rodentia_B ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000161526.b #26 ENSGT00940000155183 #25 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Myomorpha ANCESTRAL SPECIES 14 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000161526.b #26 ENSGT00940000155183 #25 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Muroidea ANCESTRAL SPECIES 11 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000161526.b #26 ENSGT00940000155183 #25 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Muroidea_A ANCESTRAL SPECIES 8 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.f #35 ENSGT00940000161526.b #26 ENSGT00940000155183.e #25 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Cricetidae ANCESTRAL SPECIES 9 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.f #35 ENSGT00940000161526.b #26 ENSGT00940000155183.e.a.b #25 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Cricetinae ANCESTRAL SPECIES 24 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.e.a.a.b.a #29 ENSGT00940000155183.e.a.b.a.a #30 ENSGT00940000155183.f #35 ENSGT00940000161526.b #26 ENSGT00940000155183.e.a.b.a.b #28 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 204 Ybey (ENSCGRG00001022036) #7 Mcm3ap (ENSCGRG00001015274) #8 Lss (ENSCGRG00001020282) #9 Spatc1l (ENSCGRG00001017850) #10 Ftcd (ENSCGRG00001011730) #11 Col6a2 (ENSCGRG00001003342) #12 Col6a1 (ENSCGRG00001017421) #13 Pcbp3 (ENSCGRG00001006836) #14 SLC19A1 (ENSCGRG00001016846) #15 Col18a1 (ENSCGRG00001013369) #16 Pofut2 (ENSCGRG00001022765) #17 Adarb1 (ENSCGRG00001023922) #18 Fam207a (ENSCGRG00001016236) #19 Itgb2 (ENSCGRG00001016235) #20 Pttg1ip (ENSCGRG00001000333) #21 Sumo3 (ENSCGRG00001014923) #22 Ube2g2 (ENSCGRG00001012138) #23 ENSCGRG00001011367 #24 ENSCGRG00001023741 #25 ENSCGRG00001013697 #26 ENSCGRG00001016181 #27 ENSCGRG00001012982 #28 ENSCGRG00001018033 #29 ENSCGRG00001011140 #30 ENSCGRG00001007516 #31 ENSCGRG00001006645 #32 ENSCGRG00001000302 #33 ENSCGRG00001000038 #34 Gm36176 (ENSCGRG00001022992) #35 ENSCGRG00001017382 #36 ENSCGRG00001013139 #37 Chinese hamster chok1gshd MODERN SPECIES 215 Gsto2 (ENSCGRG00001019874) Itprip (ENSCGRG00001015730) Cfap58 (ENSCGRG00001018536) Sorcs3 (ENSCGRG00001013586) Sorcs1 (ENSCGRG00001015262) Xpnpep1 (ENSCGRG00001023199) Add3 (ENSCGRG00001016019) ENSCGRG00001013476 Smndc1 (ENSCGRG00001012973) Mxi1 (ENSCGRG00001009794) Dusp5 (ENSCGRG00001006024) Smc3 (ENSCGRG00001024369) Rbm20 (ENSCGRG00001023235) Pdcd4 (ENSCGRG00001007322) ENSCGRG00001004791 ENSCGRG00001001812 ##22 Shoc2 (ENSCGRG00001000210) Adra2a (ENSCGRG00001015710) ENSCGRG00001014865 Gpam (ENSCGRG00001022396) Tectb (ENSCGRG00001021092) Gucy2g (ENSCGRG00001020462) ENSCGRG00001019520 Zdhhc6 (ENSCGRG00001017113) Vti1a (ENSCGRG00001020765) Tcf7l2 (ENSCGRG00001019358) Habp2 (ENSCGRG00001017201) Nrap (ENSCGRG00001000170) Casp7 (ENSCGRG00001019974) Plekhs1 (ENSCGRG00001018611) Dclre1a (ENSCGRG00001017843) Golden Hamster MODERN SPECIES 641 Mcm3ap (ENSMAUG00000008393) #8 Lss (ENSMAUG00000005365) #9 Spatc1l (ENSMAUG00000006869) #10 Ftcd (ENSMAUG00000004152) #11 Col6a2 (ENSMAUG00000022073) #12 ENSMAUG00000020615 Pcbp3 (ENSMAUG00000007036) #14 ENSMAUG00000012520 Slc19a1 (ENSMAUG00000007979) #15 Col18a1 (ENSMAUG00000008076) #16 Pofut2 (ENSMAUG00000006922) #17 Adarb1 (ENSMAUG00000009334) #18 Fam207a (ENSMAUG00000009365) #19 ENSMAUG00000021821 #20 Pttg1ip (ENSMAUG00000010900) #21 Sumo3 (ENSMAUG00000009748) #22 Ube2g2 (ENSMAUG00000022077) #23 ENSMAUG00000021040 #35 ENSMAUG00000002462 #26 ENSMAUG00000021981 #26 ENSMAUG00000007884 #26 ENSMAUG00000012939 #28 Tspear (ENSMAUG00000011883) Lrrc3 (ENSMAUG00000021907) Trpm2 (ENSMAUG00000005011) Cfap410 (ENSMAUG00000018378) Pfkl (ENSMAUG00000017741) Aire (ENSMAUG00000021943) Dnmt3l (ENSMAUG00000019680) Icosl (ENSMAUG00000019140) Pwp2 (ENSMAUG00000020265) Cricetidae_B ANCESTRAL SPECIES 12 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 13 Or7d9 (ENSMOCG00000000337) ENSMOCG00000019115 ENSMOCG00000012110 ENSMOCG00000004665 Or1m1 (ENSMOCG00000006062) ENSMOCG00000006310 Zfp558 (ENSMOCG00000018648) Naalad2 (ENSMOCG00000004722) Chordc1 (ENSMOCG00000002318) ENSMOCG00000016118 Fat3 (ENSMOCG00000011364) Mtnr1b (ENSMOCG00000007650) Slc36a4 (ENSMOCG00000018384) Deup1 (ENSMOCG00000020791) Smco4 (ENSMOCG00000006274) ENSMOCG00000021789 #22 Cep295 (ENSMOCG00000021770) Taf1d (ENSMOCG00000014011) 4931406C07Rik (ENSMOCG00000012170) Med17 (ENSMOCG00000018802) Vstm5 (ENSMOCG00000012686) ENSMOCG00000015072 ENSMOCG00000021818 Alkbh8 (ENSMOCG00000019349) Cwf19l2 (ENSMOCG00000010389) Endod1 (ENSMOCG00000016035) Sesn3 (ENSMOCG00000013595) Fam76b (ENSMOCG00000001551) Cep57 (ENSMOCG00000005014) Mtmr2 (ENSMOCG00000009930) Maml2 (ENSMOCG00000021568) Prairie vole MODERN SPECIES 352 Ybey (ENSMOCG00000012634) #7 Mcm3ap (ENSMOCG00000018380) #8 Lss (ENSMOCG00000020263) #9 Spatc1l (ENSMOCG00000012025) #10 Ftcd (ENSMOCG00000013801) #11 Col6a2 (ENSMOCG00000007120) #12 Col6a1 (ENSMOCG00000015635) #13 Pcbp3 (ENSMOCG00000016127) #14 Slc19a1 (ENSMOCG00000008838) #15 Col18a1 (ENSMOCG00000019606) #16 Pofut2 (ENSMOCG00000013158) #17 Adarb1 (ENSMOCG00000018324) #18 Fam207a (ENSMOCG00000021449) #19 Itgb2 (ENSMOCG00000022498) #20 Pttg1ip (ENSMOCG00000020270) #21 ENSMOCG00000021821 #22 Ube2g2 (ENSMOCG00000001721) #23 Tspear (ENSMOCG00000013552) ENSMOCG00000016087 ##25 ENSMOCG00000017107 ENSMOCG00000017419 #26 ENSMOCG00000018107 #26 ENSMOCG00000004341 #26 ENSMOCG00000013216 #29 ENSMOCG00000014262 #25 ENSMOCG00000015079 ##25 ENSMOCG00000016139 ##25 Lrrc3 (ENSMOCG00000017485) Trpm2 (ENSMOCG00000019856) Cfap410 (ENSMOCG00000020426) ENSMOCG00000013045 Prairie vole MODERN SPECIES 15 Itgb4 (ENSMOCG00000018829) Sap30bp (ENSMOCG00000011898) Recql5 (ENSMOCG00000019642) Myo15b (ENSMOCG00000013403) Llgl2 (ENSMOCG00000016380) Tsen54 (ENSMOCG00000021585) ENSMOCG00000015226 Tmem94 (ENSMOCG00000014527) ENSMOCG00000002602 Grb2 (ENSMOCG00000017537) ENSMOCG00000013006 Mif4gd (ENSMOCG00000010287) Mrps7 (ENSMOCG00000005519) Gga3 (ENSMOCG00000003209) Nup85 (ENSMOCG00000018333) ENSMOCG00000022080 #22 ENSMOCG00000012165 Nt5c (ENSMOCG00000019361) Armc7 (ENSMOCG00000013951) Slc16a5 (ENSMOCG00000010701) Trim80 (ENSMOCG00000021797) Kctd2 (ENSMOCG00000012062) Atp5h (ENSMOCG00000015015) Mrpl58 (ENSMOCG00000015630) Cdr2l (ENSMOCG00000019874) Hid1 (ENSMOCG00000012205) ENSMOCG00000011864 Ush1g (ENSMOCG00000017696) Otop2 (ENSMOCG00000012832) Fads6 (ENSMOCG00000012241) ENSMOCG00000010764 Murinae ANCESTRAL SPECIES 18 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.f #35 ENSGT00940000161526.b #26 ENSGT00940000155183.e #25 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Rat MODERN SPECIES 16 Adck1 (ENSRNOG00000012685) Nrxn3 (ENSRNOG00000047574) dsr-2 (ENSRNOG00000066815) ENSRNOG00000062878 ENSRNOG00000063297 Dio2 (ENSRNOG00000062383) Cep128 (ENSRNOG00000003908) Tshr (ENSRNOG00000003972) Gtf2a1 (ENSRNOG00000004300) Ston2 (ENSRNOG00000004458) Sel1l (ENSRNOG00000004464) AABR07065217.2 (ENSRNOG00000042542) ENSRNOG00000030420 ENSRNOG00000066641 AABR07065265.1 (ENSRNOG00000021751) LOC103692684 (ENSRNOG00000070197) #22 ENSRNOG00000066374 Flrt2 (ENSRNOG00000003732) Galc (ENSRNOG00000003759) Gpr65 (ENSRNOG00000065590) Kcnk10 (ENSRNOG00000003813) Spata7 (ENSRNOG00000003955) Ptpn21 (ENSRNOG00000060568) Zc3h14 (ENSRNOG00000004083) Eml5 (ENSRNOG00000004207) Ttc8 (ENSRNOG00000004542) Cpg1 (ENSRNOG00000060278) Foxn3 (ENSRNOG00000004709) Efcab11 (ENSRNOG00000053317) Tdp1 (ENSRNOG00000003831) Kcnk13 (ENSRNOG00000047363) Mus ANCESTRAL SPECIES 15 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000155183.e.d.a #25 ENSGT00940000155183.f.a #35 ENSGT00940000155183.e.c #25 ENSGT00940000161526.b.r.b.b #26 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 Shrew mouse MODERN SPECIES 22 Mcm3ap (MGP_PahariEiJ_G0030883) #8 Lss (MGP_PahariEiJ_G0030884) #9 Spatc1l (MGP_PahariEiJ_G0030885) #10 Ftcd (MGP_PahariEiJ_G0030886) #11 Col6a2 (MGP_PahariEiJ_G0030887) #12 Col6a1 (MGP_PahariEiJ_G0030888) #13 Pcbp3 (MGP_PahariEiJ_G0030889) #14 MGP_PahariEiJ_G0030890 Slc19a1 (MGP_PahariEiJ_G0030891) #15 Col18a1 (MGP_PahariEiJ_G0030892) #16 Pofut2 (MGP_PahariEiJ_G0030893) #17 Adarb1 (MGP_PahariEiJ_G0030894) #18 Fam207a (MGP_PahariEiJ_G0030895) #19 Itgb2 (MGP_PahariEiJ_G0030896) #20 Pttg1ip (MGP_PahariEiJ_G0030897) #21 Sumo3 (MGP_PahariEiJ_G0030898) #22 Ube2g2 (MGP_PahariEiJ_G0030899) #23 MGP_PahariEiJ_G0030900 #35 Gm10272 (MGP_PahariEiJ_G0030901) #26 MGP_PahariEiJ_G0030902 #26 MGP_PahariEiJ_G0030903 #26 Krtap12-1 (MGP_PahariEiJ_G0030904) #26 MGP_PahariEiJ_G0030905 #26 MGP_PahariEiJ_G0030906 #35 MGP_PahariEiJ_G0030907 #25 MGP_PahariEiJ_G0030908 #25 Tspear (MGP_PahariEiJ_G0030909) Lrrc3 (MGP_PahariEiJ_G0030910) MGP_PahariEiJ_G0030911 Cfap410 (MGP_PahariEiJ_G0030912) Pfkl (MGP_PahariEiJ_G0030913) Mus_A ANCESTRAL SPECIES 11 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00900000143399 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000155183.e.c.b.b.a #25 ENSGT00940000155183.e.c.b.a #25 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Ryukyu mouse MODERN SPECIES 1 Lss (MGP_CAROLIEiJ_G0015470) #9 Spatc1l (MGP_CAROLIEiJ_G0015471) #10 Ftcd (MGP_CAROLIEiJ_G0015472) #11 Col6a2 (MGP_CAROLIEiJ_G0015473) #12 Col6a1 (MGP_CAROLIEiJ_G0015474) #13 Pcbp3 (MGP_CAROLIEiJ_G0015475) #14 MGP_CAROLIEiJ_G0015476 Slc19a1 (MGP_CAROLIEiJ_G0015477) #15 Col18a1 (MGP_CAROLIEiJ_G0015478) #16 MGP_CAROLIEiJ_G0015479 Pofut2 (MGP_CAROLIEiJ_G0015480) #17 Adarb1 (MGP_CAROLIEiJ_G0015481) #18 Fam207a (MGP_CAROLIEiJ_G0015482) #19 Itgb2 (MGP_CAROLIEiJ_G0015483) #20 Pttg1ip (MGP_CAROLIEiJ_G0015484) #21 Sumo3 (MGP_CAROLIEiJ_G0015485) #22 Ube2g2 (MGP_CAROLIEiJ_G0015486) #23 Gm10272 (MGP_CAROLIEiJ_G0015487) #26 Gm10024 (MGP_CAROLIEiJ_G0015488) #26 Gm10142 (MGP_CAROLIEiJ_G0015489) #26 Krtap12-1 (MGP_CAROLIEiJ_G0015490) #26 Gm10100 (MGP_CAROLIEiJ_G0015491) #26 MGP_CAROLIEiJ_G0015492 #25 Gm19668 (MGP_CAROLIEiJ_G0015493) #25 MGP_CAROLIEiJ_G0015494 #25 Krtap10-10 (MGP_CAROLIEiJ_G0015495) #25 Tspear (MGP_CAROLIEiJ_G0015496) Lrrc3 (MGP_CAROLIEiJ_G0015497) MGP_CAROLIEiJ_G0015498 Cfap410 (MGP_CAROLIEiJ_G0015499) Pfkl (MGP_CAROLIEiJ_G0015500) Mus_B ANCESTRAL SPECIES 10 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00900000143399 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT01050000248522 ENSGT00390000011821.b Mouse MODERN SPECIES 1 Ybey (ENSMUSG00000033126) #7 Mcm3ap (ENSMUSG00000001150) #8 Lss (ENSMUSG00000033105) #9 Spatc1l (ENSMUSG00000009115) #10 Ftcd (ENSMUSG00000001155) #11 Col6a2 (ENSMUSG00000020241) #12 Col6a1 (ENSMUSG00000001119) #13 Pcbp3 (ENSMUSG00000001120) #14 Slc19a1 (ENSMUSG00000001436) #15 Col18a1 (ENSMUSG00000001435) #16 Pofut2 (ENSMUSG00000020260) #17 Adarb1 (ENSMUSG00000020262) #18 Fam207a (ENSMUSG00000032977) #19 Itgb2 (ENSMUSG00000000290) #20 Pttg1ip (ENSMUSG00000009291) #21 Sumo3 (ENSMUSG00000020265) #22 Ube2g2 (ENSMUSG00000009293) #23 Tspear (ENSMUSG00000069581) Gm19402 (ENSMUSG00000095970) #25 Gm9508 (ENSMUSG00000112170) #25 Gm10272 (ENSMUSG00000069584) #26 Gm10024 (ENSMUSG00000094012) #26 Gm10142 (ENSMUSG00000094146) #26 Krtap12-1 (ENSMUSG00000069583) #26 Gm10100 (ENSMUSG00000096421) #26 Gm18596 (ENSMUSG00000112864) #25 Gm9736 (ENSMUSG00000112380) #25 Gm3233 (ENSMUSG00000094120) #25 Gm3238 (ENSMUSG00000095817) #25 Gm7138 (ENSMUSG00000095593) #25 Gm3250 (ENSMUSG00000096481) #25 Mus_C ANCESTRAL SPECIES 7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00900000143399 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.f.b.a #35 ENSGT00940000161526.b.r.a #26 ENSGT00940000161526.b.r.b.a.b.b #26 ENSGT00940000161526.b.r.b.a.a #26 ENSGT00940000161526.b.r.b.a.b.a #26 ENSGT00940000161526.b.r.b.b #26 ENSGT00940000155183.e.c.b.b.b #25 ENSGT00940000155183.f.a #35 ENSGT00940000155183.e.d.a.b #25 ENSGT00510000047718 ENSGT00940000155183.e.c.b.a #25 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 spretus MODERN SPECIES 1 Lss (MGP_SPRETEiJ_G0016283) #9 Spatc1l (MGP_SPRETEiJ_G0016284) #10 Ftcd (MGP_SPRETEiJ_G0016285) #11 Col6a2 (MGP_SPRETEiJ_G0016286) #12 Col6a1 (MGP_SPRETEiJ_G0016287) #13 Pcbp3 (MGP_SPRETEiJ_G0016288) #14 MGP_SPRETEiJ_G0016289 Slc19a1 (MGP_SPRETEiJ_G0016290) #15 Col18a1 (MGP_SPRETEiJ_G0016291) #16 MGP_SPRETEiJ_G0016292 Pofut2 (MGP_SPRETEiJ_G0016293) #17 Adarb1 (MGP_SPRETEiJ_G0016294) #18 Fam207a (MGP_SPRETEiJ_G0016295) #19 Itgb2 (MGP_SPRETEiJ_G0016296) #20 Pttg1ip (MGP_SPRETEiJ_G0016297) #21 Sumo3 (MGP_SPRETEiJ_G0016298) #22 Ube2g2 (MGP_SPRETEiJ_G0016299) #23 MGP_SPRETEiJ_G0016300 #35 Gm10272 (MGP_SPRETEiJ_G0016301) #26 Gm10024 (MGP_SPRETEiJ_G0016302) #26 Gm10142 (MGP_SPRETEiJ_G0016303) #26 Krtap12-1 (MGP_SPRETEiJ_G0016304) #26 Gm10100 (MGP_SPRETEiJ_G0016305) #26 Gm19668 (MGP_SPRETEiJ_G0016306) #25 MGP_SPRETEiJ_G0016307 #35 Tspear (MGP_SPRETEiJ_G0016308) MGP_SPRETEiJ_G0016309 #25 Lrrc3 (MGP_SPRETEiJ_G0016310) Trpm2 (MGP_SPRETEiJ_G0016311) Cfap410 (MGP_SPRETEiJ_G0016312) Pfkl (MGP_SPRETEiJ_G0016313) Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 3135 Recql5 (ENSMSIG00000028015) Smim6 (ENSMSIG00000028032) Smim5 (ENSMSIG00000028034) Myo15b (ENSMSIG00000028039) Llgl2 (ENSMSIG00000028102) Tsen54 (ENSMSIG00000028141) Caskin2 (ENSMSIG00000028161) Tmem94 (ENSMSIG00000028168) ENSMSIG00000028209 Grb2 (ENSMSIG00000028212) Slc25a19 (ENSMSIG00000028240) Mif4gd (ENSMSIG00000028258) Mrps7 (ENSMSIG00000028269) Gga3 (ENSMSIG00000028278) Nup85 (ENSMSIG00000028322) ENSMSIG00000028342 #22 Jpt1 (ENSMSIG00000028349) Armc7 (ENSMSIG00000028366) Nt5c (ENSMSIG00000028372) Slc16a5 (ENSMSIG00000028378) Trim80 (ENSMSIG00000028383) ENSMSIG00000028388 ENSMSIG00000028398 Mrpl58 (ENSMSIG00000028407) Cdr2l (ENSMSIG00000028417) Hid1 (ENSMSIG00000028424) Otop3 (ENSMSIG00000028450) Otop2 (ENSMSIG00000028457) Ush1g (ENSMSIG00000028465) Fads6 (ENSMSIG00000028470) Fdxr (ENSMSIG00000028471) Steppe mouse MODERN SPECIES 2060 ENSMSIG00000018269 #21 ENSMSIG00000018250 #22 ENSMSIG00000018221 #23 ENSMSIG00000018206 ENSMSIG00000018197 #25 Gm9508 (ENSMSIG00000018192) #25 Gm10272 (ENSMSIG00000018187) #26 Gm10024 (ENSMSIG00000018183) #26 Gm10142 (ENSMSIG00000018177) #26 Krtap12-1 (ENSMSIG00000018172) #26 Gm10100 (ENSMSIG00000018166) #26 ENSMSIG00000018163 #26 Upper Galilee mountains blind mole rat MODERN SPECIES 1105 Ybey (ENSNGAG00000000949) #7 Mcm3ap (ENSNGAG00000020806) #8 Lss (ENSNGAG00000018100) #9 Spatc1l (ENSNGAG00000016890) #10 Ftcd (ENSNGAG00000015978) #11 Col6a2 (ENSNGAG00000013702) #12 Col6a1 (ENSNGAG00000010525) #13 Pcbp3 (ENSNGAG00000005416) #14 ENSNGAG00000003477 #15 Col18a1 (ENSNGAG00000019514) #16 Pofut2 (ENSNGAG00000016043) #17 Adarb1 (ENSNGAG00000021602) #18 Fam207a (ENSNGAG00000020787) #19 Itgb2 (ENSNGAG00000015702) #20 Pttg1ip (ENSNGAG00000014261) #21 Sumo3 (ENSNGAG00000009915) #22 Ube2g2 (ENSNGAG00000002914) #23 ENSNGAG00000022913 #26 ENSNGAG00000022654 #26 ENSNGAG00000018160 #25 Lesser Egyptian jerboa MODERN SPECIES 170 2610028H24Rik (ENSJJAG00000013433) Mcm3ap (ENSJJAG00000011921) #8 Lss (ENSJJAG00000008335) #9 Spatc1l (ENSJJAG00000003377) #10 Ftcd (ENSJJAG00000000888) #11 Col6a2 (ENSJJAG00000023030) #12 Col6a1 (ENSJJAG00000021936) #13 Pcbp3 (ENSJJAG00000021192) #14 Slc19a1 (ENSJJAG00000020575) #15 Col18a1 (ENSJJAG00000018606) #16 Pofut2 (ENSJJAG00000017712) #17 Adarb1 (ENSJJAG00000016847) #18 ENSJJAG00000016167 #19 Itgb2 (ENSJJAG00000015668) #20 Pttg1ip (ENSJJAG00000011874) #21 Sumo3 (ENSJJAG00000011166) #22 Ube2g2 (ENSJJAG00000010215) #23 ENSJJAG00000009838 #25 ENSJJAG00000009512 #25 ENSJJAG00000007731 #25 Tspear (ENSJJAG00000004036) Lrrc3 (ENSJJAG00000001845) Trpm2 (ENSJJAG00000022864) Cfap410 (ENSJJAG00000021716) Pfkl (ENSJJAG00000021078) Aire (ENSJJAG00000017059) ENSJJAG00000014700 ENSJJAG00000014399 Gatd3a (ENSJJAG00000013621) Pwp2 (ENSJJAG00000013039) Trappc10 (ENSJJAG00000011263) Kangaroo rat MODERN SPECIES 478 Ybey (ENSDORG00000024242) #7 Mcm3ap (ENSDORG00000004416) #8 Lss (ENSDORG00000010415) #9 Spatc1l (ENSDORG00000010414) #10 Ftcd (ENSDORG00000004547) #11 Col6a2 (ENSDORG00000028732) #12 ENSDORG00000004103 Pcbp3 (ENSDORG00000003640) #14 Slc19a1 (ENSDORG00000008087) #15 ENSDORG00000011477 Pofut2 (ENSDORG00000009350) #17 Adarb1 (ENSDORG00000000619) #18 Fam207a (ENSDORG00000028131) #19 ENSDORG00000012531 #20 Pttg1ip (ENSDORG00000028984) #21 Sumo3 (ENSDORG00000025904) #22 Ube2g2 (ENSDORG00000025137) #23 ENSDORG00000014492 #25 ENSDORG00000019765 #26 ENSDORG00000026443 #26 ENSDORG00000024465 #26 ENSDORG00000029443 #26 ENSDORG00000028505 #25 ENSDORG00000019773 #25 Rodentia_A ANCESTRAL SPECIES 5 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 #25 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Sciuridae ANCESTRAL SPECIES 12 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989.h #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 14 IDO2 (ENSSVLG00005021403) IDO1 (ENSSVLG00005021549) ADAM18 (ENSSVLG00005021659) ENSSVLG00005021965 ENSSVLG00005022023 ADAM32 (ENSSVLG00005022276) ENSSVLG00005022608 ADAM9 (ENSSVLG00005010866) TM2D2 (ENSSVLG00005011108) HTRA4 (ENSSVLG00005011148) PLEKHA2 (ENSSVLG00005011303) TACC1 (ENSSVLG00005011491) FGFR1 (ENSSVLG00005011874) LETM2 (ENSSVLG00005012521) NSD3 (ENSSVLG00005013101) ENSSVLG00005013154 #22 PLPP5 (ENSSVLG00005013468) DDHD2 (ENSSVLG00005013607) BAG4 (ENSSVLG00005013686) LSM1 (ENSSVLG00005013791) STAR (ENSSVLG00005013903) ASH2L (ENSSVLG00005014040) EIF4EBP1 (ENSSVLG00005014183) ENSSVLG00005014228 ADRB3 (ENSSVLG00005014273) GOT1L1 (ENSSVLG00005014325) ENSSVLG00005014501 BRF2 (ENSSVLG00005014567) ADGRA2 (ENSSVLG00005014696) ENSSVLG00005014866 ENSSVLG00005014990 Eurasian red squirrel MODERN SPECIES 1 YBEY (ENSSVLG00005018192) #7 MCM3AP (ENSSVLG00005018327) #8 LSS (ENSSVLG00005018385) #9 SPATC1L (ENSSVLG00005019009) #10 ENSSVLG00005019107 #11 ENSSVLG00005019331 #11 COL6A2 (ENSSVLG00005019580) #12 COL6A1 (ENSSVLG00005019712) #13 PCBP3 (ENSSVLG00005019852) #14 SLC19A1 (ENSSVLG00005020132) #15 POFUT2 (ENSSVLG00005021705) #17 ADARB1 (ENSSVLG00005021761) #18 SLX9 (ENSSVLG00005021933) #19 ITGB2 (ENSSVLG00005022020) #20 ENSSVLG00005022355 #21 ENSSVLG00005022452 #22 UBE2G2 (ENSSVLG00005022482) #23 TSPEAR (ENSSVLG00005022529) ENSSVLG00005022624 ENSSVLG00005022707 ENSSVLG00005023080 ENSSVLG00005023369 LRRC3 (ENSSVLG00005023556) TRPM2 (ENSSVLG00005023598) CFAP410 (ENSSVLG00005023882) PFKL (ENSSVLG00005023925) AIRE (ENSSVLG00005023997) ENSSVLG00005024326 ICOSLG (ENSSVLG00005024369) GATD3 (ENSSVLG00005024474) PWP2 (ENSSVLG00005024557) Marmotini DUPLICATION Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES 36 ENSGT00390000007870 ENSGT00940000165228 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.j.n.a #22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000162951 ENSGT00940000158336 ENSGT00390000003582.e ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00950000182990.b ENSGT00390000013574 Marmotini_b ANCESTRAL SPECIES 182 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000163601 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989.h #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.n.a #22 ENSGT00940000158193 #23 ENSGT00510000047718 Squirrel DUPLICATION Squirrel MODERN SPECIES 378 YBEY (ENSSTOG00000029373) #7 MCM3AP (ENSSTOG00000007531) #8 LSS (ENSSTOG00000007503) #9 SPATC1L (ENSSTOG00000026388) #10 FTCD (ENSSTOG00000020132) #11 COL6A2 (ENSSTOG00000024366) #12 ENSSTOG00000022346 PCBP3 (ENSSTOG00000007178) #14 SLC19A1 (ENSSTOG00000007113) #15 ENSSTOG00000027467 #16 POFUT2 (ENSSTOG00000028617) #17 ADARB1 (ENSSTOG00000015792) #18 SLX9 (ENSSTOG00000028031) #19 ITGB2 (ENSSTOG00000001412) #20 PTTG1IP (ENSSTOG00000021779) #21 ENSSTOG00000010587 #22 UBE2G2 (ENSSTOG00000007968) #23 TSPEAR (ENSSTOG00000022950) ENSSTOG00000029592 ENSSTOG00000031377 #25 ENSSTOG00000032824 #25 ENSSTOG00000020703 ENSSTOG00000020813 #25 ENSSTOG00000030499 ENSSTOG00000034349 #25 ENSSTOG00000009410 #25 Squirrel MODERN SPECIES 194 ENSSTOG00000033976 SMIM5 (ENSSTOG00000022610) RECQL5 (ENSSTOG00000012970) ENSSTOG00000030239 ENSSTOG00000021155 LLGL2 (ENSSTOG00000012891) TSEN54 (ENSSTOG00000012883) CASKIN2 (ENSSTOG00000021787) TMEM94 (ENSSTOG00000012842) GRB2 (ENSSTOG00000012661) ENSSTOG00000015212 MIF4GD (ENSSTOG00000022390) MRPS7 (ENSSTOG00000015200) GGA3 (ENSSTOG00000015187) NUP85 (ENSSTOG00000015175) ENSSTOG00000024685 #22 JPT1 (ENSSTOG00000015171) NT5C (ENSSTOG00000015167) ARMC7 (ENSSTOG00000015164) SLC16A5 (ENSSTOG00000015159) ENSSTOG00000019549 ATP5PD (ENSSTOG00000015154) MRPL58 (ENSSTOG00000015149) CDR2L (ENSSTOG00000023575) KCTD2 (ENSSTOG00000015158) HID1 (ENSSTOG00000015130) OTOP3 (ENSSTOG00000021608) OTOP2 (ENSSTOG00000025566) USH1G (ENSSTOG00000021597) FADS6 (ENSSTOG00000009655) FDXR (ENSSTOG00000009639) Marmotini ANCESTRAL SPECIES 21 ENSGT00410000025698.a ENSGT00390000011270 ENSGT00390000001960 ENSGT00940000157390 ENSGT00940000159171 ENSGT00940000159967 ENSGT00550000074815 ENSGT00940000157359 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000157560.e ENSGT00390000004585 ENSGT00940000159665 ENSGT00940000162410 ENSGT00950000183093.C ENSGT00950000182895.a.b.j.n.b #22 ENSGT00940000157671 ENSGT00520000058292 ENSGT00940000161139 ENSGT00390000011405 ENSGT00950000182767.a.a ENSGT00390000016465 ENSGT00390000006681.c ENSGT00940000157407 ENSGT00940000162464 ENSGT00940000160410 ENSGT00740000115684 ENSGT00940000160090 ENSGT00940000170327 ENSGT00940000154784.D.a.b ENSGT00940000153463.b Marmotini_b ANCESTRAL SPECIES 160 ENSGT00410000025698.a ENSGT00390000011270 ENSGT00390000001960 ENSGT00940000157390 ENSGT00940000159171 ENSGT00940000159967 ENSGT00550000074815 ENSGT00940000157359 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000157560.e ENSGT00390000004585 ENSGT00940000159665 ENSGT00940000162410 ENSGT00950000183093.C ENSGT00950000182895.a.b.j.n.b #22 ENSGT00940000157671 ENSGT00520000058292 ENSGT00940000161139 ENSGT00390000011405 Arctic ground squirrel MODERN SPECIES 54 GPATCH2 (ENSUPAG00010009619) SPATA17 (ENSUPAG00010009658) RRP15 (ENSUPAG00010009681) TGFB2 (ENSUPAG00010009688) LYPLAL1 (ENSUPAG00010009729) SLC30A10 (ENSUPAG00010009741) EPRS1 (ENSUPAG00010009749) BPNT1 (ENSUPAG00010009777) IARS2 (ENSUPAG00010009798) RAB3GAP2 (ENSUPAG00010009831) MARK1 (ENSUPAG00010009891) C1orf115 (ENSUPAG00010009923) MTARC2 (ENSUPAG00010009928) MTARC1 (ENSUPAG00010009939) HLX (ENSUPAG00010009960) ENSUPAG00010009975 #22 DUSP10 (ENSUPAG00010009979) ENSUPAG00010009984 HHIPL2 (ENSUPAG00010009987) ENSUPAG00010010009 Squirrel MODERN SPECIES 250 ENSSTOG00000030930 DNAH6 (ENSSTOG00000028220) SUCLG1 (ENSSTOG00000016550) LYPLAL1 (ENSSTOG00000025167) SLC30A10 (ENSSTOG00000003770) EPRS1 (ENSSTOG00000011870) BPNT1 (ENSSTOG00000005861) IARS2 (ENSSTOG00000005879) RAB3GAP2 (ENSSTOG00000020278) ENSSTOG00000004797 MARK1 (ENSSTOG00000004930) C1orf115 (ENSSTOG00000029139) MTARC2 (ENSSTOG00000006676) MTARC1 (ENSSTOG00000006692) HLX (ENSSTOG00000006326) ENSSTOG00000030827 #22 DUSP10 (ENSSTOG00000011662) HHIPL2 (ENSSTOG00000007102) Alpin marmot MODERN SPECIES 12 TGFB2 (ENSMMMG00000024197) LYPLAL1 (ENSMMMG00000024196) SLC30A10 (ENSMMMG00000024195) EPRS1 (ENSMMMG00000024193) BPNT1 (ENSMMMG00000024192) ENSMMMG00000024191 IARS2 (ENSMMMG00000024190) RAB3GAP2 (ENSMMMG00000024188) ENSMMMG00000024187 MARK1 (ENSMMMG00000024186) C1orf115 (ENSMMMG00000024185) MTARC2 (ENSMMMG00000024184) MTARC1 (ENSMMMG00000024183) HLX (ENSMMMG00000024182) ENSMMMG00000024180 ENSMMMG00000024179 #22 DUSP10 (ENSMMMG00000024177) ENSMMMG00000024176 TAF1A (ENSMMMG00000024175) MIA3 (ENSMMMG00000024174) ENSMMMG00000024173 ENSMMMG00000024172 ENSMMMG00000024171 ENSMMMG00000024170 DISP1 (ENSMMMG00000024169) TLR5 (ENSMMMG00000024168) SUSD4 (ENSMMMG00000024167) CCDC185 (ENSMMMG00000024166) CAPN8 (ENSMMMG00000024165) ENSMMMG00000024163 CAPN2 (ENSMMMG00000024162) Marmotini ANCESTRAL SPECIES 13 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000163601 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989.h #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.o #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826.lb Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 90 SAP30BP (ENSMMMG00000010396) RECQL5 (ENSMMMG00000010416) ENSMMMG00000010454 SMIM5 (ENSMMMG00000010460) ENSMMMG00000010467 LLGL2 (ENSMMMG00000010530) ENSMMMG00000010600 CASKIN2 (ENSMMMG00000010618) TMEM94 (ENSMMMG00000010651) GRB2 (ENSMMMG00000010717) SLC25A19 (ENSMMMG00000010758) MIF4GD (ENSMMMG00000010800) MRPS7 (ENSMMMG00000010811) GGA3 (ENSMMMG00000010824) NUP85 (ENSMMMG00000010923) ENSMMMG00000010977 #22 JPT1 (ENSMMMG00000011009) NT5C (ENSMMMG00000011020) ARMC7 (ENSMMMG00000011039) SLC16A5 (ENSMMMG00000011051) ENSMMMG00000011073 ENSMMMG00000011080 ATP5PD (ENSMMMG00000011085) MRPL58 (ENSMMMG00000011103) CDR2L (ENSMMMG00000011134) HID1 (ENSMMMG00000011148) OTOP3 (ENSMMMG00000011211) OTOP2 (ENSMMMG00000011228) USH1G (ENSMMMG00000011236) FADS6 (ENSMMMG00000011248) FDXR (ENSMMMG00000011264) Alpin marmot MODERN SPECIES 4 MCM3AP (ENSMMMG00000013170) #8 LSS (ENSMMMG00000013141) #9 SPATC1L (ENSMMMG00000013131) #10 FTCD (ENSMMMG00000013068) #11 ENSMMMG00000013067 #12 COL6A2 (ENSMMMG00000013048) #12 ENSMMMG00000013027 PCBP3 (ENSMMMG00000012976) #14 SLC19A1 (ENSMMMG00000012919) #15 ENSMMMG00000012904 #16 POFUT2 (ENSMMMG00000012809) #17 ADARB1 (ENSMMMG00000012767) #18 SLX9 (ENSMMMG00000012725) #19 ITGB2 (ENSMMMG00000012709) #20 ENSMMMG00000012708 #21 SUMO3 (ENSMMMG00000012686) #22 ENSMMMG00000012676 UBE2G2 (ENSMMMG00000012664) #23 ENSMMMG00000012657 #26 ENSMMMG00000012650 ENSMMMG00000012640 TSPEAR (ENSMMMG00000012623) LRRC3 (ENSMMMG00000012614) TRPM2 (ENSMMMG00000012573) CFAP410 (ENSMMMG00000012554) ENSMMMG00000012488 AIRE (ENSMMMG00000012367) ENSMMMG00000012363 ICOSLG (ENSMMMG00000012361) GATD3 (ENSMMMG00000012356) PWP2 (ENSMMMG00000011468) Marmotini_b ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.o #22 Squirrel MODERN SPECIES 605 ENSSTOG00000008319 #22 Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 329 IPO4 (ENSUPAG00010009601) REC8 (ENSUPAG00010009635) ENSUPAG00010009650 RNF31 (ENSUPAG00010009656) PSME2 (ENSUPAG00010009682) EMC9 (ENSUPAG00010009721) PSME1 (ENSUPAG00010009735) FITM1 (ENSUPAG00010009801) DCAF11 (ENSUPAG00010009807) PCK2 (ENSUPAG00010009905) NRL (ENSUPAG00010009985) CPNE6 (ENSUPAG00010009996) CARMIL3 (ENSUPAG00010010070) ENSUPAG00010010123 DHRS2 (ENSUPAG00010010137) ENSUPAG00010010483 #22 ENSUPAG00010010485 JPH4 (ENSUPAG00010010533) AP1G2 (ENSUPAG00010010537) THTPA (ENSUPAG00010010569) ZFHX2 (ENSUPAG00010010574) NGDN (ENSUPAG00010010585) MYH6 (ENSUPAG00010010620) CMTM5 (ENSUPAG00010010806) IL25 (ENSUPAG00010010826) EFS (ENSUPAG00010010832) SLC22A17 (ENSUPAG00010010867) PABPN1 (ENSUPAG00010010902) BCL2L2 (ENSUPAG00010010908) PPP1R3E (ENSUPAG00010010914) HOMEZ (ENSUPAG00010010920) Arctic ground squirrel MODERN SPECIES 924 SUMO3 (ENSUPAG00010023954) #22 UBE2G2 (ENSUPAG00010023952) #23 ENSUPAG00010023949 ENSUPAG00010023947 Hystricomorpha ANCESTRAL SPECIES 60 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 #25 ENSGT00510000047718 ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 Naked mole-rat female MODERN SPECIES 11 ENSHGLG00000012528 #8 LSS (ENSHGLG00000008767) #9 SPATC1L (ENSHGLG00000013076) #10 FTCD (ENSHGLG00000048038) #11 COL6A2 (ENSHGLG00000009116) #12 COL6A1 (ENSHGLG00000017878) #13 PCBP3 (ENSHGLG00000018620) #14 SLC19A1 (ENSHGLG00000013143) #15 ENSHGLG00000018308 #16 POFUT2 (ENSHGLG00000041783) #17 ADARB1 (ENSHGLG00000005906) #18 SLX9 (ENSHGLG00000045493) #19 ITGB2 (ENSHGLG00000013472) #20 ENSHGLG00000049629 PTTG1IP (ENSHGLG00000033185) #21 ENSHGLG00000037860 #22 ENSHGLG00000009258 #23 ENSHGLG00000014199 ENSHGLG00000005505 #25 ENSHGLG00000043957 ENSHGLG00000038544 #25 ENSHGLG00000007283 ENSHGLG00000015985 ENSHGLG00000046004 CSTB (ENSHGLG00000047009) RRP1 (ENSHGLG00000050109) AGPAT3 (ENSHGLG00000048529) TRAPPC10 (ENSHGLG00000013176) PWP2 (ENSHGLG00000017401) ENSHGLG00000018104 ENSHGLG00000013877 Hystricomorpha_a ANCESTRAL SPECIES 37 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 #25 ENSGT00510000047718 ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 Guinea pig MODERN SPECIES 90 ADARB1 (ENSCPOG00000022969) #18 SLX9 (ENSCPOG00000036519) #19 ITGB2 (ENSCPOG00000025922) #20 PTTG1IP (ENSCPOG00000023250) #21 SUMO3 (ENSCPOG00000025203) #22 UBE2G2 (ENSCPOG00000035970) #23 ENSCPOG00000037876 #25 ENSCPOG00000032969 #25 ENSCPOG00000038786 #25 ENSCPOG00000034347 #25 TSPEAR (ENSCPOG00000004362) ENSCPOG00000036402 #25 PDXK (ENSCPOG00000039719) CSTB (ENSCPOG00000031855) RRP1 (ENSCPOG00000038986) AGPAT3 (ENSCPOG00000032718) TRAPPC10 (ENSCPOG00000011117) PWP2 (ENSCPOG00000023616) GATD3 (ENSCPOG00000011419) DNMT3L (ENSCPOG00000004070) Hystricomorpha_b ANCESTRAL SPECIES ENSGT00950000182895.a.b.j #22 Degu MODERN SPECIES 165 ENSODEG00000003412 PRR16 (ENSODEG00000003401) ENSODEG00000003064 ENSODEG00000003051 FAM170A (ENSODEG00000003032) ENSODEG00000003016 HSD17B4 (ENSODEG00000002614) ENSODEG00000018825 ENSODEG00000002485 DMXL1 (ENSODEG00000002200) ENSODEG00000018764 DTWD2 (ENSODEG00000001974) ENSODEG00000018846 ENSODEG00000018768 #22 ENSODEG00000002744 SEMA6A (ENSODEG00000002653) ENSODEG00000002602 ENSODEG00000002580 ENSODEG00000002563 ARL14EPL (ENSODEG00000002532) LVRN (ENSODEG00000002192) ENSODEG00000002163 ATG12 (ENSODEG00000002126) CDO1 (ENSODEG00000002104) TMED7 (ENSODEG00000002066) ENSODEG00000018754 FEM1C (ENSODEG00000002045) CCDC112 (ENSODEG00000002154) PGGT1B (ENSODEG00000002053)