Myomorpha	ANCESTRAL SPECIES	14	ENSGT00950000183170.b.b	ENSGT00940000156322 #7	ENSGT00390000011570 #8	ENSGT00520000055666.b #9	ENSGT00390000005581.a #10	ENSGT00940000155682 #11	ENSGT00940000162889	ENSGT00940000162185 #13	ENSGT00950000183022.b #15	ENSGT00940000158212.B #16	ENSGT00390000007989 #17	ENSGT00940000155992 #18	ENSGT00390000015709 #19	ENSGT01090000259987.a.a.a.c #20	ENSGT00390000004977 #21	ENSGT00950000182895.a.b.j #22	ENSGT00940000158193 #23	ENSGT00940000161526.b #25	ENSGT00940000155183 #24	ENSGT00510000047718 #29	ENSGT00940000154360.A.b #30	ENSGT00940000156404 #31	ENSGT00390000018807 #32	ENSGT00940000159292 #33	ENSGT00940000161104 #34	ENSGT00940000162228 #35	ENSGT00940000161590 #36	ENSGT00390000003706.a.a	ENSGT00550000074981 #37	ENSGT00390000003873	ENSGT00950000182836.b.b.b.a
Muroidea	ANCESTRAL SPECIES	11	ENSGT00950000183170.b.b	ENSGT00940000156322 #7	ENSGT00390000011570 #8	ENSGT00520000055666.b #9	ENSGT00390000005581.a #10	ENSGT00940000155682 #11	ENSGT00940000162889	ENSGT00940000162185 #13	ENSGT00950000183022.b #15	ENSGT00940000158212.B #16	ENSGT00390000007989 #17	ENSGT00940000155992 #18	ENSGT00390000015709 #19	ENSGT01090000259987.a.a.a.c #20	ENSGT00390000004977 #21	ENSGT00950000182895.a.b.j #22	ENSGT00940000158193 #23	ENSGT00940000161526.b #25	ENSGT00940000155183 #24	ENSGT00510000047718 #29	ENSGT00940000154360.A.b #30	ENSGT00940000156404 #31	ENSGT00390000018807 #32	ENSGT00940000159292 #33	ENSGT00940000161104 #34	ENSGT00940000162228 #35	ENSGT00940000161590 #36	ENSGT00390000003706.a.a	ENSGT00550000074981 #37	ENSGT00390000003873	ENSGT00950000182836.b.b.b.a
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00950000183170.b.b	ENSGT00940000156322 #7	ENSGT00390000011570 #8	ENSGT00520000055666.b #9	ENSGT00390000005581.a #10	ENSGT00940000155682 #11	ENSGT00940000162889	ENSGT00940000162185 #13	ENSGT00950000183022.b #15	ENSGT00940000158212.B #16	ENSGT00390000007989 #17	ENSGT00940000155992 #18	ENSGT00390000015709 #19	ENSGT01090000259987.a.a.a.c #20	ENSGT00390000004977 #21	ENSGT00950000182895.a.b.j #22	ENSGT00940000158193 #23	ENSGT00940000155183.f #24	ENSGT00940000161526.b #25	ENSGT00940000155183.e #28	ENSGT00510000047718 #29	ENSGT00940000154360.A.b #30	ENSGT00940000156404 #31	ENSGT00390000018807 #32	ENSGT00940000159292 #33	ENSGT00940000161104 #34	ENSGT00940000162228 #35	ENSGT00940000161590 #36	ENSGT00390000003706.a.a	ENSGT00550000074981 #37	ENSGT00390000003873
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00950000183170.b.b	ENSGT00940000156322 #7	ENSGT00390000011570 #8	ENSGT00520000055666.b #9	ENSGT00390000005581.a #10	ENSGT00940000155682 #11	ENSGT00940000162889	ENSGT00940000162185 #13	ENSGT00950000183022.b #15	ENSGT00940000158212.B #16	ENSGT00390000007989 #17	ENSGT00940000155992 #18	ENSGT00390000015709 #19	ENSGT01090000259987.a.a.a.c #20	ENSGT00390000004977 #21	ENSGT00950000182895.a.b.j #22	ENSGT00940000158193 #23	ENSGT00940000155183.f #24	ENSGT00940000161526.b #25	ENSGT00940000155183.e.a.b #28	ENSGT00510000047718 #29	ENSGT00940000154360.A.b #30	ENSGT00940000156404 #31	ENSGT00390000018807 #32	ENSGT00940000159292 #33	ENSGT00940000161104 #34	ENSGT00940000162228 #35	ENSGT00940000161590 #36	ENSGT00390000003706.a.a	ENSGT00550000074981 #37	ENSGT00390000003873
Cricetinae	ANCESTRAL SPECIES	24	ENSGT00950000183170.b.b	ENSGT00940000156322 #7	ENSGT00390000011570 #8	ENSGT00520000055666.b #9	ENSGT00390000005581.a #10	ENSGT00940000155682 #11	ENSGT00940000162889	ENSGT00940000162185 #13	ENSGT00950000183022.b #15	ENSGT00940000158212.B #16	ENSGT00390000007989 #17	ENSGT00940000155992 #18	ENSGT00390000015709 #19	ENSGT01090000259987.a.a.a.c #20	ENSGT00390000004977 #21	ENSGT00950000182895.a.b.j #22	ENSGT00940000158193 #23	ENSGT00940000155183.e.a.a.b.a ##24	ENSGT00940000155183.e.a.b.a.a ##24	ENSGT00940000155183.f #24	ENSGT00940000161526.b #25	ENSGT00940000155183.e.a.b.a.b #28	ENSGT00510000047718 #29	ENSGT00940000154360.A.b #30	ENSGT00940000156404 #31	ENSGT00390000018807 #32	ENSGT00940000159292 #33	ENSGT00940000161104 #34	ENSGT00940000162228 #35	ENSGT00940000161590 #36	ENSGT00390000003706.a.a
Golden Hamster	MODERN SPECIES	641	Mcm3ap (ENSMAUG00000008393) #7	Lss (ENSMAUG00000005365) #8	Spatc1l (ENSMAUG00000006869) #9	Ftcd (ENSMAUG00000004152) #10	Col6a2 (ENSMAUG00000022073) #11	ENSMAUG00000020615 #12	Pcbp3 (ENSMAUG00000007036) #13	ENSMAUG00000012520 #14	Slc19a1 (ENSMAUG00000007979) #15	Col18a1 (ENSMAUG00000008076) #16	Pofut2 (ENSMAUG00000006922) #17	Adarb1 (ENSMAUG00000009334) #18	Fam207a (ENSMAUG00000009365) #19	ENSMAUG00000021821 #20	Pttg1ip (ENSMAUG00000010900) #21	Sumo3 (ENSMAUG00000009748) #22	Ube2g2 (ENSMAUG00000022077) #23	ENSMAUG00000021040 #24	ENSMAUG00000002462 #25	ENSMAUG00000021981 #26	ENSMAUG00000007884 #27	ENSMAUG00000012939 #28	Tspear (ENSMAUG00000011883) #29	Lrrc3 (ENSMAUG00000021907) #30	Trpm2 (ENSMAUG00000005011) #31	Cfap410 (ENSMAUG00000018378) #32	Pfkl (ENSMAUG00000017741) #33	Aire (ENSMAUG00000021943) #34	Dnmt3l (ENSMAUG00000019680) #35	Icosl (ENSMAUG00000019140) #36	Pwp2 (ENSMAUG00000020265) #37
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	215	Gsto2 (ENSCGRG00001019874)	Itprip (ENSCGRG00001015730)	Cfap58 (ENSCGRG00001018536)	Sorcs3 (ENSCGRG00001013586)	Sorcs1 (ENSCGRG00001015262)	Xpnpep1 (ENSCGRG00001023199)	Add3 (ENSCGRG00001016019)	ENSCGRG00001013476	Smndc1 (ENSCGRG00001012973)	Mxi1 (ENSCGRG00001009794)	Dusp5 (ENSCGRG00001006024)	Smc3 (ENSCGRG00001024369)	Rbm20 (ENSCGRG00001023235)	Pdcd4 (ENSCGRG00001007322)	ENSCGRG00001004791	ENSCGRG00001001812 #22	Shoc2 (ENSCGRG00001000210)	Adra2a (ENSCGRG00001015710)	ENSCGRG00001014865 ##14	Gpam (ENSCGRG00001022396)	Tectb (ENSCGRG00001021092)	Gucy2g (ENSCGRG00001020462)	ENSCGRG00001019520	Zdhhc6 (ENSCGRG00001017113)	Vti1a (ENSCGRG00001020765)	Tcf7l2 (ENSCGRG00001019358)	Habp2 (ENSCGRG00001017201)	Nrap (ENSCGRG00001000170)	Casp7 (ENSCGRG00001019974)	Plekhs1 (ENSCGRG00001018611)	Dclre1a (ENSCGRG00001017843)
Chinese hamster chok1gshd	MODERN SPECIES	204	Ybey (ENSCGRG00001022036)	Mcm3ap (ENSCGRG00001015274) #7	Lss (ENSCGRG00001020282) #8	Spatc1l (ENSCGRG00001017850) #9	Ftcd (ENSCGRG00001011730) #10	Col6a2 (ENSCGRG00001003342) #11	Col6a1 (ENSCGRG00001017421)	Pcbp3 (ENSCGRG00001006836) #13	SLC19A1 (ENSCGRG00001016846) #15	Col18a1 (ENSCGRG00001013369) #16	Pofut2 (ENSCGRG00001022765) #17	Adarb1 (ENSCGRG00001023922) #18	Fam207a (ENSCGRG00001016236) #19	Itgb2 (ENSCGRG00001016235) #20	Pttg1ip (ENSCGRG00001000333) #21	Sumo3 (ENSCGRG00001014923) #22	Ube2g2 (ENSCGRG00001012138) #23	ENSCGRG00001011367	ENSCGRG00001023741 ##24	ENSCGRG00001013697 #25	ENSCGRG00001016181 #25	ENSCGRG00001012982 #28	ENSCGRG00001018033 ##24	ENSCGRG00001011140 ##24	ENSCGRG00001007516 ##24	ENSCGRG00001006645 ##24	ENSCGRG00001000302 ##24	ENSCGRG00001000038 ##24	Gm36176 (ENSCGRG00001022992) #24	ENSCGRG00001017382 ##24	ENSCGRG00001013139 ##24
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00950000183170.b.b	ENSGT00940000156322 #7	ENSGT00390000011570 #8	ENSGT00520000055666.b #9	ENSGT00390000005581.a #10	ENSGT00940000155682 #11	ENSGT00940000162889	ENSGT00940000162185 #13	ENSGT00950000183022.b #15	ENSGT00940000158212.B #16	ENSGT00390000007989 #17	ENSGT00940000155992 #18	ENSGT00390000015709 #19	ENSGT01090000259987.a.a.a.c #20	ENSGT00390000004977 #21	ENSGT00950000182895.a.b.j #22	ENSGT00940000158193 #23	ENSGT00510000047718 #29	ENSGT00940000154360.A.b #30	ENSGT00940000156404 #31	ENSGT00390000018807 #32	ENSGT00940000159292 #33	ENSGT00940000161104 #34	ENSGT00940000162228 #35	ENSGT00940000161590 #36	ENSGT00390000003706.a.a	ENSGT00550000074981 #37	ENSGT00390000003873	ENSGT00950000182836.b.b.b.a	ENSGT00390000011821.b	ENSGT00940000154826
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	13	Or7d9 (ENSMOCG00000000337)	ENSMOCG00000019115	ENSMOCG00000012110	ENSMOCG00000004665	Or1m1 (ENSMOCG00000006062)	ENSMOCG00000006310	Zfp558 (ENSMOCG00000018648)	Naalad2 (ENSMOCG00000004722)	Chordc1 (ENSMOCG00000002318)	ENSMOCG00000016118	Fat3 (ENSMOCG00000011364)	Mtnr1b (ENSMOCG00000007650)	Slc36a4 (ENSMOCG00000018384)	Deup1 (ENSMOCG00000020791)	Smco4 (ENSMOCG00000006274)	ENSMOCG00000021789 #22	Cep295 (ENSMOCG00000021770)	Taf1d (ENSMOCG00000014011)	4931406C07Rik (ENSMOCG00000012170)	Med17 (ENSMOCG00000018802)	Vstm5 (ENSMOCG00000012686)	ENSMOCG00000015072	ENSMOCG00000021818	Alkbh8 (ENSMOCG00000019349)	Cwf19l2 (ENSMOCG00000010389)	Endod1 (ENSMOCG00000016035)	Sesn3 (ENSMOCG00000013595)	Fam76b (ENSMOCG00000001551)	Cep57 (ENSMOCG00000005014)	Mtmr2 (ENSMOCG00000009930)	Maml2 (ENSMOCG00000021568)
Prairie vole	MODERN SPECIES	352	Ybey (ENSMOCG00000012634)	Mcm3ap (ENSMOCG00000018380) #7	Lss (ENSMOCG00000020263) #8	Spatc1l (ENSMOCG00000012025) #9	Ftcd (ENSMOCG00000013801) #10	Col6a2 (ENSMOCG00000007120) #11	Col6a1 (ENSMOCG00000015635)	Pcbp3 (ENSMOCG00000016127) #13	Slc19a1 (ENSMOCG00000008838) #15	Col18a1 (ENSMOCG00000019606) #16	Pofut2 (ENSMOCG00000013158) #17	Adarb1 (ENSMOCG00000018324) #18	Fam207a (ENSMOCG00000021449) #19	Itgb2 (ENSMOCG00000022498) #20	Pttg1ip (ENSMOCG00000020270) #21	ENSMOCG00000021821 #22	Ube2g2 (ENSMOCG00000001721) #23	Tspear (ENSMOCG00000013552) #29	ENSMOCG00000016087 ##24	ENSMOCG00000017107	ENSMOCG00000017419 #25	ENSMOCG00000018107 #25	ENSMOCG00000004341 #25	ENSMOCG00000013216 ##24	ENSMOCG00000014262 #28	ENSMOCG00000015079 ##24	ENSMOCG00000016139 ##24	Lrrc3 (ENSMOCG00000017485) #30	Trpm2 (ENSMOCG00000019856) #31	Cfap410 (ENSMOCG00000020426) #32	ENSMOCG00000013045 #33
Prairie vole	MODERN SPECIES	15	Itgb4 (ENSMOCG00000018829)	Sap30bp (ENSMOCG00000011898)	Recql5 (ENSMOCG00000019642)	Myo15b (ENSMOCG00000013403)	Llgl2 (ENSMOCG00000016380)	Tsen54 (ENSMOCG00000021585)	ENSMOCG00000015226	Tmem94 (ENSMOCG00000014527)	ENSMOCG00000002602	Grb2 (ENSMOCG00000017537)	ENSMOCG00000013006	Mif4gd (ENSMOCG00000010287)	Mrps7 (ENSMOCG00000005519)	Gga3 (ENSMOCG00000003209)	Nup85 (ENSMOCG00000018333)	ENSMOCG00000022080 #22	ENSMOCG00000012165	Nt5c (ENSMOCG00000019361)	Armc7 (ENSMOCG00000013951)	Slc16a5 (ENSMOCG00000010701)	Trim80 (ENSMOCG00000021797)	Kctd2 (ENSMOCG00000012062)	Atp5h (ENSMOCG00000015015)	Mrpl58 (ENSMOCG00000015630)	Cdr2l (ENSMOCG00000019874)	Hid1 (ENSMOCG00000012205)	ENSMOCG00000011864	Ush1g (ENSMOCG00000017696)	Otop2 (ENSMOCG00000012832)	Fads6 (ENSMOCG00000012241)	ENSMOCG00000010764
Murinae	ANCESTRAL SPECIES	18	ENSGT00950000183170.b.b	ENSGT00940000156322 #7	ENSGT00390000011570 #8	ENSGT00520000055666.b #9	ENSGT00390000005581.a #10	ENSGT00940000155682 #11	ENSGT00940000162889	ENSGT00940000162185 #13	ENSGT00950000183022.b #15	ENSGT00940000158212.B #16	ENSGT00390000007989 #17	ENSGT00940000155992 #18	ENSGT00390000015709 #19	ENSGT01090000259987.a.a.a.c #20	ENSGT00390000004977 #21	ENSGT00950000182895.a.b.j #22	ENSGT00940000158193 #23	ENSGT00940000155183.f #24	ENSGT00940000161526.b #25	ENSGT00940000155183.e #28	ENSGT00510000047718 #29	ENSGT00940000154360.A.b #30	ENSGT00940000156404 #31	ENSGT00390000018807 #32	ENSGT00940000159292 #33	ENSGT00940000161104 #34	ENSGT00940000162228 #35	ENSGT00940000161590 #36	ENSGT00390000003706.a.a	ENSGT00550000074981 #37	ENSGT00390000003873
Rat	MODERN SPECIES	16	Adck1 (ENSRNOG00000012685)	Nrxn3 (ENSRNOG00000047574)	dsr-2 (ENSRNOG00000066815)	ENSRNOG00000062878	ENSRNOG00000063297	Dio2 (ENSRNOG00000062383)	Cep128 (ENSRNOG00000003908)	Tshr (ENSRNOG00000003972)	Gtf2a1 (ENSRNOG00000004300)	Ston2 (ENSRNOG00000004458)	Sel1l (ENSRNOG00000004464)	AABR07065217.2 (ENSRNOG00000042542)	ENSRNOG00000030420	ENSRNOG00000066641	AABR07065265.1 (ENSRNOG00000021751)	LOC103692684 (ENSRNOG00000070197) #22	ENSRNOG00000066374	Flrt2 (ENSRNOG00000003732)	Galc (ENSRNOG00000003759)	Gpr65 (ENSRNOG00000065590)	Kcnk10 (ENSRNOG00000003813)	Spata7 (ENSRNOG00000003955)	Ptpn21 (ENSRNOG00000060568)	Zc3h14 (ENSRNOG00000004083)	Eml5 (ENSRNOG00000004207)	Ttc8 (ENSRNOG00000004542)	Cpg1 (ENSRNOG00000060278)	Foxn3 (ENSRNOG00000004709)	Efcab11 (ENSRNOG00000053317)	Tdp1 (ENSRNOG00000003831)	Kcnk13 (ENSRNOG00000047363)
Mus	ANCESTRAL SPECIES	15	ENSGT00950000183170.b.b	ENSGT00940000156322 #7	ENSGT00390000011570 #8	ENSGT00520000055666.b #9	ENSGT00390000005581.a #10	ENSGT00940000155682 #11	ENSGT00940000162889	ENSGT00940000162185 #13	ENSGT00950000183022.b #15	ENSGT00940000158212.B #16	ENSGT00390000007989 #17	ENSGT00940000155992 #18	ENSGT00390000015709 #19	ENSGT01090000259987.a.a.a.c #20	ENSGT00390000004977 #21	ENSGT00950000182895.a.b.j #22	ENSGT00940000158193 #23	ENSGT00510000047718 #29	ENSGT00940000155183.e.d.a #28	ENSGT00940000155183.f.a #24	ENSGT00940000155183.e.c #28	ENSGT00940000161526.b.r.b.b #25	ENSGT00940000154360.A.b #30	ENSGT00940000156404 #31	ENSGT00390000018807 #32	ENSGT00940000159292 #33	ENSGT00940000161104 #34	ENSGT00940000162228 #35	ENSGT00940000161590 #36	ENSGT00390000003706.a.a	ENSGT00550000074981 #37
Shrew mouse	MODERN SPECIES	22	Mcm3ap (MGP_PahariEiJ_G0030883) #7	Lss (MGP_PahariEiJ_G0030884) #8	Spatc1l (MGP_PahariEiJ_G0030885) #9	Ftcd (MGP_PahariEiJ_G0030886) #10	Col6a2 (MGP_PahariEiJ_G0030887) #11	Col6a1 (MGP_PahariEiJ_G0030888)	Pcbp3 (MGP_PahariEiJ_G0030889) #13	MGP_PahariEiJ_G0030890	Slc19a1 (MGP_PahariEiJ_G0030891) #15	Col18a1 (MGP_PahariEiJ_G0030892) #16	Pofut2 (MGP_PahariEiJ_G0030893) #17	Adarb1 (MGP_PahariEiJ_G0030894) #18	Fam207a (MGP_PahariEiJ_G0030895) #19	Itgb2 (MGP_PahariEiJ_G0030896) #20	Pttg1ip (MGP_PahariEiJ_G0030897) #21	Sumo3 (MGP_PahariEiJ_G0030898) #22	Ube2g2 (MGP_PahariEiJ_G0030899) #23	MGP_PahariEiJ_G0030900 #24	Gm10272 (MGP_PahariEiJ_G0030901) #25	MGP_PahariEiJ_G0030902 #25	MGP_PahariEiJ_G0030903 #25	Krtap12-1 (MGP_PahariEiJ_G0030904) #25	MGP_PahariEiJ_G0030905 #25	MGP_PahariEiJ_G0030906 #24	MGP_PahariEiJ_G0030907 #28	MGP_PahariEiJ_G0030908 #28	Tspear (MGP_PahariEiJ_G0030909) #29	Lrrc3 (MGP_PahariEiJ_G0030910) #30	MGP_PahariEiJ_G0030911 #31	Cfap410 (MGP_PahariEiJ_G0030912) #32	Pfkl (MGP_PahariEiJ_G0030913) #33
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000156322 #7	ENSGT00390000011570 #8	ENSGT00520000055666.b #9	ENSGT00390000005581.a #10	ENSGT00940000155682 #11	ENSGT00940000162889	ENSGT00940000162185 #13	ENSGT00900000143399	ENSGT00950000183022.b #15	ENSGT00940000158212.B #16	ENSGT00390000007989 #17	ENSGT00940000155992 #18	ENSGT00390000015709 #19	ENSGT01090000259987.a.a.a.c #20	ENSGT00390000004977 #21	ENSGT00950000182895.a.b.j #22	ENSGT00940000158193 #23	ENSGT00510000047718 #29	ENSGT00940000155183.e.c.b.b.a #28	ENSGT00940000155183.e.c.b.a #28	ENSGT00940000154360.A.b #30	ENSGT00940000156404 #31	ENSGT00390000018807 #32	ENSGT00940000159292 #33	ENSGT00940000161104 #34	ENSGT00940000162228 #35	ENSGT00940000161590 #36	ENSGT00390000003706.a.a	ENSGT00550000074981 #37	ENSGT00390000003873	ENSGT00950000182836.b.b.b.a
Ryukyu mouse	MODERN SPECIES	1	Lss (MGP_CAROLIEiJ_G0015470) #8	Spatc1l (MGP_CAROLIEiJ_G0015471) #9	Ftcd (MGP_CAROLIEiJ_G0015472) #10	Col6a2 (MGP_CAROLIEiJ_G0015473) #11	Col6a1 (MGP_CAROLIEiJ_G0015474)	Pcbp3 (MGP_CAROLIEiJ_G0015475) #13	MGP_CAROLIEiJ_G0015476	Slc19a1 (MGP_CAROLIEiJ_G0015477) #15	Col18a1 (MGP_CAROLIEiJ_G0015478) #16	MGP_CAROLIEiJ_G0015479	Pofut2 (MGP_CAROLIEiJ_G0015480) #17	Adarb1 (MGP_CAROLIEiJ_G0015481) #18	Fam207a (MGP_CAROLIEiJ_G0015482) #19	Itgb2 (MGP_CAROLIEiJ_G0015483) #20	Pttg1ip (MGP_CAROLIEiJ_G0015484) #21	Sumo3 (MGP_CAROLIEiJ_G0015485) #22	Ube2g2 (MGP_CAROLIEiJ_G0015486) #23	Gm10272 (MGP_CAROLIEiJ_G0015487) #25	Gm10024 (MGP_CAROLIEiJ_G0015488) #25	Gm10142 (MGP_CAROLIEiJ_G0015489) #25	Krtap12-1 (MGP_CAROLIEiJ_G0015490) #25	Gm10100 (MGP_CAROLIEiJ_G0015491) #25	MGP_CAROLIEiJ_G0015492 #28	Gm19668 (MGP_CAROLIEiJ_G0015493) #28	MGP_CAROLIEiJ_G0015494 #28	Krtap10-10 (MGP_CAROLIEiJ_G0015495) #28	Tspear (MGP_CAROLIEiJ_G0015496) #29	Lrrc3 (MGP_CAROLIEiJ_G0015497) #30	MGP_CAROLIEiJ_G0015498 #31	Cfap410 (MGP_CAROLIEiJ_G0015499) #32	Pfkl (MGP_CAROLIEiJ_G0015500) #33
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000156322 #7	ENSGT00390000011570 #8	ENSGT00520000055666.b #9	ENSGT00390000005581.a #10	ENSGT00940000155682 #11	ENSGT00940000162889	ENSGT00940000162185 #13	ENSGT00900000143399	ENSGT00950000183022.b #15	ENSGT00940000158212.B #16	ENSGT00390000007989 #17	ENSGT00940000155992 #18	ENSGT00390000015709 #19	ENSGT01090000259987.a.a.a.c #20	ENSGT00390000004977 #21	ENSGT00950000182895.a.b.j #22	ENSGT00940000158193 #23	ENSGT00510000047718 #29	ENSGT00940000154360.A.b #30	ENSGT00940000156404 #31	ENSGT00390000018807 #32	ENSGT00940000159292 #33	ENSGT00940000161104 #34	ENSGT00940000162228 #35	ENSGT00940000161590 #36	ENSGT00390000003706.a.a	ENSGT00550000074981 #37	ENSGT00390000003873	ENSGT00950000182836.b.b.b.a	ENSGT01050000248522	ENSGT00390000011821.b
Mouse	MODERN SPECIES	1	Ybey (ENSMUSG00000033126)	Mcm3ap (ENSMUSG00000001150) #7	Lss (ENSMUSG00000033105) #8	Spatc1l (ENSMUSG00000009115) #9	Ftcd (ENSMUSG00000001155) #10	Col6a2 (ENSMUSG00000020241) #11	Col6a1 (ENSMUSG00000001119)	Pcbp3 (ENSMUSG00000001120) #13	Slc19a1 (ENSMUSG00000001436) #15	Col18a1 (ENSMUSG00000001435) #16	Pofut2 (ENSMUSG00000020260) #17	Adarb1 (ENSMUSG00000020262) #18	Fam207a (ENSMUSG00000032977) #19	Itgb2 (ENSMUSG00000000290) #20	Pttg1ip (ENSMUSG00000009291) #21	Sumo3 (ENSMUSG00000020265) #22	Ube2g2 (ENSMUSG00000009293) #23	Tspear (ENSMUSG00000069581) #29	Gm19402 (ENSMUSG00000095970) #28	Gm9508 (ENSMUSG00000112170) #28	Gm10272 (ENSMUSG00000069584) #25	Gm10024 (ENSMUSG00000094012) #25	Gm10142 (ENSMUSG00000094146) #25	Krtap12-1 (ENSMUSG00000069583) #25	Gm10100 (ENSMUSG00000096421) #25	Gm18596 (ENSMUSG00000112864) #28	Gm9736 (ENSMUSG00000112380) #28	Gm3233 (ENSMUSG00000094120) #28	Gm3238 (ENSMUSG00000095817) #28	Gm7138 (ENSMUSG00000095593) #28	Gm3250 (ENSMUSG00000096481) #28
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000156322 #7	ENSGT00390000011570 #8	ENSGT00520000055666.b #9	ENSGT00390000005581.a #10	ENSGT00940000155682 #11	ENSGT00940000162889	ENSGT00940000162185 #13	ENSGT00900000143399	ENSGT00950000183022.b #15	ENSGT00940000158212.B #16	ENSGT00390000007989 #17	ENSGT00940000155992 #18	ENSGT00390000015709 #19	ENSGT01090000259987.a.a.a.c #20	ENSGT00390000004977 #21	ENSGT00950000182895.a.b.j #22	ENSGT00940000158193 #23	ENSGT00940000155183.f.b.a #24	ENSGT00940000161526.b.r.a #25	ENSGT00940000161526.b.r.b.a.b.b #25	ENSGT00940000161526.b.r.b.a.a #25	ENSGT00940000161526.b.r.b.a.b.a #25	ENSGT00940000161526.b.r.b.b #25	ENSGT00940000155183.e.c.b.b.b #28	ENSGT00940000155183.f.a #24	ENSGT00940000155183.e.d.a.b #28	ENSGT00510000047718 #29	ENSGT00940000155183.e.c.b.a #28	ENSGT00940000154360.A.b #30	ENSGT00940000156404 #31	ENSGT00390000018807 #32
spretus	MODERN SPECIES	1	Lss (MGP_SPRETEiJ_G0016283) #8	Spatc1l (MGP_SPRETEiJ_G0016284) #9	Ftcd (MGP_SPRETEiJ_G0016285) #10	Col6a2 (MGP_SPRETEiJ_G0016286) #11	Col6a1 (MGP_SPRETEiJ_G0016287)	Pcbp3 (MGP_SPRETEiJ_G0016288) #13	MGP_SPRETEiJ_G0016289	Slc19a1 (MGP_SPRETEiJ_G0016290) #15	Col18a1 (MGP_SPRETEiJ_G0016291) #16	MGP_SPRETEiJ_G0016292	Pofut2 (MGP_SPRETEiJ_G0016293) #17	Adarb1 (MGP_SPRETEiJ_G0016294) #18	Fam207a (MGP_SPRETEiJ_G0016295) #19	Itgb2 (MGP_SPRETEiJ_G0016296) #20	Pttg1ip (MGP_SPRETEiJ_G0016297) #21	Sumo3 (MGP_SPRETEiJ_G0016298) #22	Ube2g2 (MGP_SPRETEiJ_G0016299) #23	MGP_SPRETEiJ_G0016300 #24	Gm10272 (MGP_SPRETEiJ_G0016301) #25	Gm10024 (MGP_SPRETEiJ_G0016302) #25	Gm10142 (MGP_SPRETEiJ_G0016303) #25	Krtap12-1 (MGP_SPRETEiJ_G0016304) #25	Gm10100 (MGP_SPRETEiJ_G0016305) #25	Gm19668 (MGP_SPRETEiJ_G0016306) #28	MGP_SPRETEiJ_G0016307 #24	Tspear (MGP_SPRETEiJ_G0016308) #29	MGP_SPRETEiJ_G0016309 #28	Lrrc3 (MGP_SPRETEiJ_G0016310) #30	Trpm2 (MGP_SPRETEiJ_G0016311) #31	Cfap410 (MGP_SPRETEiJ_G0016312) #32	Pfkl (MGP_SPRETEiJ_G0016313) #33
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	3135	Recql5 (ENSMSIG00000028015)	Smim6 (ENSMSIG00000028032)	Smim5 (ENSMSIG00000028034)	Myo15b (ENSMSIG00000028039)	Llgl2 (ENSMSIG00000028102)	Tsen54 (ENSMSIG00000028141)	Caskin2 (ENSMSIG00000028161)	Tmem94 (ENSMSIG00000028168)	ENSMSIG00000028209	Grb2 (ENSMSIG00000028212)	Slc25a19 (ENSMSIG00000028240)	Mif4gd (ENSMSIG00000028258)	Mrps7 (ENSMSIG00000028269)	Gga3 (ENSMSIG00000028278)	Nup85 (ENSMSIG00000028322)	ENSMSIG00000028342 #22	Jpt1 (ENSMSIG00000028349)	Armc7 (ENSMSIG00000028366)	Nt5c (ENSMSIG00000028372)	Slc16a5 (ENSMSIG00000028378)	Trim80 (ENSMSIG00000028383)	ENSMSIG00000028388	ENSMSIG00000028398	Mrpl58 (ENSMSIG00000028407)	Cdr2l (ENSMSIG00000028417)	Hid1 (ENSMSIG00000028424)	Otop3 (ENSMSIG00000028450)	Otop2 (ENSMSIG00000028457)	Ush1g (ENSMSIG00000028465)	Fads6 (ENSMSIG00000028470)	Fdxr (ENSMSIG00000028471)
Steppe mouse	MODERN SPECIES	2060															ENSMSIG00000018269 #21	ENSMSIG00000018250 #22	ENSMSIG00000018221 #23	ENSMSIG00000018206	ENSMSIG00000018197 #28	Gm9508 (ENSMSIG00000018192) #28	Gm10272 (ENSMSIG00000018187) #25	Gm10024 (ENSMSIG00000018183) #25	Gm10142 (ENSMSIG00000018177) #25	Krtap12-1 (ENSMSIG00000018172) #25	Gm10100 (ENSMSIG00000018166) #25	ENSMSIG00000018163 #25
Upper Galilee mountains blind mole rat	MODERN SPECIES	1105	Ybey (ENSNGAG00000000949)	Mcm3ap (ENSNGAG00000020806) #7	Lss (ENSNGAG00000018100) #8	Spatc1l (ENSNGAG00000016890) #9	Ftcd (ENSNGAG00000015978) #10	Col6a2 (ENSNGAG00000013702) #11	Col6a1 (ENSNGAG00000010525)	Pcbp3 (ENSNGAG00000005416) #13	ENSNGAG00000003477 #15	Col18a1 (ENSNGAG00000019514) #16	Pofut2 (ENSNGAG00000016043) #17	Adarb1 (ENSNGAG00000021602) #18	Fam207a (ENSNGAG00000020787) #19	Itgb2 (ENSNGAG00000015702) #20	Pttg1ip (ENSNGAG00000014261) #21	Sumo3 (ENSNGAG00000009915) #22	Ube2g2 (ENSNGAG00000002914) #23	ENSNGAG00000022913 #25	ENSNGAG00000022654 #25	ENSNGAG00000018160 #24
Lesser Egyptian jerboa	MODERN SPECIES	170	2610028H24Rik (ENSJJAG00000013433)	Mcm3ap (ENSJJAG00000011921) #7	Lss (ENSJJAG00000008335) #8	Spatc1l (ENSJJAG00000003377) #9	Ftcd (ENSJJAG00000000888) #10	Col6a2 (ENSJJAG00000023030) #11	Col6a1 (ENSJJAG00000021936)	Pcbp3 (ENSJJAG00000021192) #13	Slc19a1 (ENSJJAG00000020575) #15	Col18a1 (ENSJJAG00000018606) #16	Pofut2 (ENSJJAG00000017712) #17	Adarb1 (ENSJJAG00000016847) #18	ENSJJAG00000016167 #19	Itgb2 (ENSJJAG00000015668) #20	Pttg1ip (ENSJJAG00000011874) #21	Sumo3 (ENSJJAG00000011166) #22	Ube2g2 (ENSJJAG00000010215) #23	ENSJJAG00000009838 #24	ENSJJAG00000009512 #24	ENSJJAG00000007731 #24	Tspear (ENSJJAG00000004036) #29	Lrrc3 (ENSJJAG00000001845) #30	Trpm2 (ENSJJAG00000022864) #31	Cfap410 (ENSJJAG00000021716) #32	Pfkl (ENSJJAG00000021078) #33	Aire (ENSJJAG00000017059) #34	ENSJJAG00000014700 #35	ENSJJAG00000014399 #36	Gatd3a (ENSJJAG00000013621)	Pwp2 (ENSJJAG00000013039) #37	Trappc10 (ENSJJAG00000011263)