Sarcopterygii	ANCESTRAL SPECIES	43	ENSGT00390000010750.b	ENSGT00390000000190 #27	ENSGT00940000156783 #26	ENSGT00390000015892 #12	ENSGT00940000156853 #11	ENSGT00390000002725 #10	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000164753	ENSGT00940000158204 #18	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000175873	ENSGT00940000161006	ENSGT00390000003107.b	ENSGT00530000064222.a	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000153887.B	ENSGT01100000263537.b.b.c.a.a	ENSGT00390000009795	ENSGT00940000156765	ENSGT00940000166395	ENSGT00940000160358	ENSGT00940000160164	ENSGT00940000159815
Tetrapoda	ANCESTRAL SPECIES	70	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204 #18	ENSGT00550000075186 #19	ENSGT00390000018868.B.a	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00390000010750.b	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT01050000244894.b.b	ENSGT01050000244894.a.a.a.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00510000047537	ENSGT00390000011615.A
Amniota	ANCESTRAL SPECIES	32	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00390000010750.b	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT01050000244894.b.b	ENSGT00940000175759	ENSGT01050000244894.a.a.a.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00510000047537
Mammalia	ANCESTRAL SPECIES	21	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.a.b
Theria	ANCESTRAL SPECIES	9	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.a.b.rb
Eutheria	ANCESTRAL SPECIES	4	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00940000160116 #36
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00940000160116 #36
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00940000160116 #36
Primates	ANCESTRAL SPECIES	3	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.`b
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169.a #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.`b
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169.a #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.`b
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169.a #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.`b
Vervet Monkey	MODERN SPECIES	7	DCXR (ENSCSAG00000002167) #7	RAC3 (ENSCSAG00000002169) #8	LRRC45 (ENSCSAG00000002170) #9	CENPX (ENSCSAG00000002172) #10	ASPSCR1 (ENSCSAG00000002185) #11	NOTUM (ENSCSAG00000002196) #12	MYADML2 (ENSCSAG00000019046) #13	PYCR1 (ENSCSAG00000002197) #14	MAFG (ENSCSAG00000002199) #15	SIRT7 (ENSCSAG00000002208) #16	PCYT2 (ENSCSAG00000002212) #17	NPB (ENSCSAG00000002213) #18	ANAPC11 (ENSCSAG00000002214) #19	ALYREF (ENSCSAG00000002216) #20	ARHGDIA (ENSCSAG00000002218) #21	P4HB (ENSCSAG00000002220) #22	PPP1R27 (ENSCSAG00000002223) #23	MCRIP1 (ENSCSAG00000002225) #24	GCGR (ENSCSAG00000002228) #25	SLC25A10 (ENSCSAG00000002230) #26	MRPL12 (ENSCSAG00000002234) #27	HGS (ENSCSAG00000002241) #28	ARL16 (ENSCSAG00000002245) #29	CCDC137 (ENSCSAG00000002247) #30	OXLD1 (ENSCSAG00000002249) #31	PDE6G (ENSCSAG00000002251) #32	TSPAN10 (ENSCSAG00000002255) #33	NPLOC4 (ENSCSAG00000002261) #34	FSCN2 (ENSCSAG00000002264) #35	BAHCC1 (ENSCSAG00000002275) #36	ENSCSAG00000002280 #37
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00940000164946	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169.a #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.`b
Macaca	ANCESTRAL SPECIES	4	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00910000148054	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00940000164946	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169.a #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.`b
Pig-tailed macaque	MODERN SPECIES	432	DCXR (ENSMNEG00000034847) #7	RAC3 (ENSMNEG00000028547) #8	LRRC45 (ENSMNEG00000028632) #9	ENSMNEG00000041358	ASPSCR1 (ENSMNEG00000034275) #11	NOTUM (ENSMNEG00000041966) #12	MYADML2 (ENSMNEG00000025054) #13	PYCR1 (ENSMNEG00000044253) #14	MAFG (ENSMNEG00000018366) #15	SIRT7 (ENSMNEG00000034220) #16	PCYT2 (ENSMNEG00000018724) #17	NPB (ENSMNEG00000019552) #18	ENSMNEG00000038736	ALYREF (ENSMNEG00000043666) #20	ARHGDIA (ENSMNEG00000037888) #21	P4HB (ENSMNEG00000041915) #22	PPP1R27 (ENSMNEG00000039255) #23	MCRIP1 (ENSMNEG00000041387) #24	GCGR (ENSMNEG00000044954) #25	SLC25A10 (ENSMNEG00000037946) #26	MRPL12 (ENSMNEG00000016503) #27	HGS (ENSMNEG00000037102) #28	ARL16 (ENSMNEG00000045381) #29	CCDC137 (ENSMNEG00000044934) #30	OXLD1 (ENSMNEG00000044064) #31	PDE6G (ENSMNEG00000044656) #32	TSPAN10 (ENSMNEG00000042284) #33	NPLOC4 (ENSMNEG00000039349) #34	FAAP100 (ENSMNEG00000041842)	FSCN2 (ENSMNEG00000043892) #35	ACTG1 (ENSMNEG00000010642)
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00910000148054	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00940000164946	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169.a #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.`b	ENSGT00910000147003	ENSGT00940000160116 #36
Rhesus	MODERN SPECIES	7	DCXR (ENSMMUG00000059256) #7	LRRC45 (ENSMMUG00000010892) #9	CENPX (ENSMMUG00000050845) #10	ASPSCR1 (ENSMMUG00000010887) #11	NOTUM (ENSMMUG00000049343) #12	MYADML2 (ENSMMUG00000012898) #13	PYCR1 (ENSMMUG00000012895) #14	MAFG (ENSMMUG00000012893) #15	ENSMMUG00000056309	SIRT7 (ENSMMUG00000012890) #16	PCYT2 (ENSMMUG00000012889) #17	NPB (ENSMMUG00000012888) #18	ANAPC11 (ENSMMUG00000012887)	ALYREF (ENSMMUG00000012884) #20	ARHGDIA (ENSMMUG00000009949) #21	P4HB (ENSMMUG00000009242) #22	PPP1R27 (ENSMMUG00000009243) #23	GCGR (ENSMMUG00000000256) #25	SLC25A10 (ENSMMUG00000004457) #26	HGS (ENSMMUG00000008833) #28	ARL16 (ENSMMUG00000045575) #29	CCDC137 (ENSMMUG00000008831) #30	OXLD1 (ENSMMUG00000061636) #31	PDE6G (ENSMMUG00000047080) #32	TSPAN10 (ENSMMUG00000001589) #33	NPLOC4 (ENSMMUG00000001586) #34	FAAP100 (ENSMMUG00000001585)	FSCN2 (ENSMMUG00000001583) #35	ACTG1 (ENSMMUG00000012054)	ENSMMUG00000060280	ENSMMUG00000054036
Cercopithecinae_b	ANCESTRAL SPECIES	19	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00940000164946	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169.a #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.`b
Olive baboon	MODERN SPECIES	8	DCXR (ENSPANG00000030600) #7	RAC3 (ENSPANG00000033412) #8	LRRC45 (ENSPANG00000019031) #9	CENPX (ENSPANG00000019030) #10	ASPSCR1 (ENSPANG00000019034) #11	NOTUM (ENSPANG00000019033) #12	MYADML2 (ENSPANG00000004788) #13	PYCR1 (ENSPANG00000019032) #14	MAFG (ENSPANG00000019130) #15	SIRT7 (ENSPANG00000019167) #16	PCYT2 (ENSPANG00000019165) #17	NPB (ENSPANG00000019217) #18	ENSPANG00000019251	ALYREF (ENSPANG00000019265) #20	ARHGDIA (ENSPANG00000019264) #21	P4HB (ENSPANG00000019308) #22	PPP1R27 (ENSPANG00000019316) #23	ENSPANG00000035212	SLC25A10 (ENSPANG00000019332) #26	MRPL12 (ENSPANG00000019331) #27	HGS (ENSPANG00000019330) #28	ARL16 (ENSPANG00000019328) #29	CCDC137 (ENSPANG00000019327) #30	OXLD1 (ENSPANG00000035091) #31	PDE6G (ENSPANG00000019325) #32	TSPAN10 (ENSPANG00000019340) #33	NPLOC4 (ENSPANG00000019382) #34	FAAP100 (ENSPANG00000019407)	FSCN2 (ENSPANG00000019424) #35	ACTG1 (ENSPANG00000003965)	BAHCC1 (ENSPANG00000019486) #36
Cercopithecinae_d	ANCESTRAL SPECIES	15	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00940000165025	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00940000164946	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00960000187388	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169.a #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35
Sooty mangabey	MODERN SPECIES	137	DCXR (ENSCATG00000043086) #7	RAC3 (ENSCATG00000029744) #8	LRRC45 (ENSCATG00000039780) #9	ENSCATG00000037293	ASPSCR1 (ENSCATG00000039949) #11	NOTUM (ENSCATG00000035542) #12	MYADML2 (ENSCATG00000023637) #13	PYCR1 (ENSCATG00000026320) #14	MAFG (ENSCATG00000044575) #15	SIRT7 (ENSCATG00000041951) #16	PCYT2 (ENSCATG00000032599) #17	NPB (ENSCATG00000044904) #18	ENSCATG00000021685	ALYREF (ENSCATG00000033169) #20	ARHGDIA (ENSCATG00000044701) #21	P4HB (ENSCATG00000038858) #22	PPP1R27 (ENSCATG00000040109) #23	ENSCATG00000020735	MCRIP1 (ENSCATG00000031830) #24	GCGR (ENSCATG00000039442) #25	SLC25A10 (ENSCATG00000039444) #26	MRPL12 (ENSCATG00000045041) #27	HGS (ENSCATG00000040899) #28	ARL16 (ENSCATG00000031623) #29	CCDC137 (ENSCATG00000042817) #30	OXLD1 (ENSCATG00000016584) #31	PDE6G (ENSCATG00000039855) #32	TSPAN10 (ENSCATG00000001443) #33	NPLOC4 (ENSCATG00000036603) #34	FAAP100 (ENSCATG00000027144)	FSCN2 (ENSCATG00000031882) #35
Drill	MODERN SPECIES	65	RFNG (ENSMLEG00000032352)	DCXR (ENSMLEG00000040146) #7	RAC3 (ENSMLEG00000044154) #8	ENSMLEG00000032856	ASPSCR1 (ENSMLEG00000036564) #11	NOTUM (ENSMLEG00000042666) #12	MYADML2 (ENSMLEG00000004302) #13	PYCR1 (ENSMLEG00000043085) #14	MAFG (ENSMLEG00000034575) #15	ENSMLEG00000032543	SIRT7 (ENSMLEG00000033723) #16	PCYT2 (ENSMLEG00000032229) #17	ENSMLEG00000031648	ALYREF (ENSMLEG00000043353) #20	ARHGDIA (ENSMLEG00000000660) #21	P4HB (ENSMLEG00000042232) #22	PPP1R27 (ENSMLEG00000036063) #23	ENSMLEG00000000088	MCRIP1 (ENSMLEG00000043926) #24	GCGR (ENSMLEG00000037442) #25	ENSMLEG00000000540 #26	MRPL12 (ENSMLEG00000041715) #27	HGS (ENSMLEG00000028514) #28	ARL16 (ENSMLEG00000028751) #29	CCDC137 (ENSMLEG00000043566) #30	OXLD1 (ENSMLEG00000032289) #31	PDE6G (ENSMLEG00000043011) #32	TSPAN10 (ENSMLEG00000039685) #33	NPLOC4 (ENSMLEG00000033303) #34	FAAP100 (ENSMLEG00000036321)	FSCN2 (ENSMLEG00000035395) #35
Rhinopithecus	ANCESTRAL SPECIES	18	ENSGT00940000160801	ENSGT00940000154873.g.a #7	ENSGT00940000154003.B #9	ENSGT00940000165025	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00940000164946	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169.a #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.`b
Golden snub-nosed monkey	MODERN SPECIES	2916	GPS1 (ENSRROG00000030549)	DCXR (ENSRROG00000023870) #7	LRRC45 (ENSRROG00000036903) #9	ENSRROG00000035010	ASPSCR1 (ENSRROG00000039974) #11	NOTUM (ENSRROG00000035484) #12	MYADML2 (ENSRROG00000003253) #13	PYCR1 (ENSRROG00000035558) #14	MAFG (ENSRROG00000027641) #15	SIRT7 (ENSRROG00000045732) #16	PCYT2 (ENSRROG00000039076) #17	NPB (ENSRROG00000031740) #18	ENSRROG00000043401	ALYREF (ENSRROG00000045364) #20	ARHGDIA (ENSRROG00000034509) #21	P4HB (ENSRROG00000027663) #22	PPP1R27 (ENSRROG00000038895) #23	MCRIP1 (ENSRROG00000044595) #24	GCGR (ENSRROG00000041144) #25	SLC25A10 (ENSRROG00000034947) #26	MRPL12 (ENSRROG00000010180) #27	HGS (ENSRROG00000041145) #28	ARL16 (ENSRROG00000029050) #29	CCDC137 (ENSRROG00000034730) #30	OXLD1 (ENSRROG00000031044) #31	ENSRROG00000041249 #32	TSPAN10 (ENSRROG00000032742) #33	NPLOC4 (ENSRROG00000014304) #34	FAAP100 (ENSRROG00000044773)	FSCN2 (ENSRROG00000034748) #35	ACTG1 (ENSRROG00000029288)
Black snub-nosed monkey	MODERN SPECIES	621	GPS1 (ENSRBIG00000019120)	RFNG (ENSRBIG00000028433)	DCXR (ENSRBIG00000042252) #7	LRRC45 (ENSRBIG00000043603) #9	ENSRBIG00000035425	ASPSCR1 (ENSRBIG00000021273) #11	NOTUM (ENSRBIG00000031399) #12	MYADML2 (ENSRBIG00000030657) #13	PYCR1 (ENSRBIG00000042531) #14	MAFG (ENSRBIG00000028692) #15	SIRT7 (ENSRBIG00000039729) #16	PCYT2 (ENSRBIG00000029220) #17	ENSRBIG00000040245	ENSRBIG00000031728	ALYREF (ENSRBIG00000039651) #20	P4HB (ENSRBIG00000036977) #22	PPP1R27 (ENSRBIG00000041442) #23	MCRIP1 (ENSRBIG00000042904) #24	GCGR (ENSRBIG00000032497) #25	ENSRBIG00000030378 #26	MRPL12 (ENSRBIG00000029573) #27	HGS (ENSRBIG00000024761) #28	ARL16 (ENSRBIG00000039807) #29	CCDC137 (ENSRBIG00000044616) #30	OXLD1 (ENSRBIG00000029624) #31	PDE6G (ENSRBIG00000033214) #32	TSPAN10 (ENSRBIG00000041732) #33	NPLOC4 (ENSRBIG00000036817) #34	FAAP100 (ENSRBIG00000038343)	FSCN2 (ENSRBIG00000007902) #35	ENSRBIG00000040203
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148054	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169.a #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.`b
Hominidae	ANCESTRAL SPECIES	16	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148054	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169.a #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.`b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148054	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169.a #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.`b
Gorilla	MODERN SPECIES	18	RAC3 (ENSGGOG00000011608) #8	LRRC45 (ENSGGOG00000011592) #9	ENSGGOG00000011589	ENSGGOG00000011578 #11	NOTUM (ENSGGOG00000034813) #12	MYADML2 (ENSGGOG00000038217) #13	PYCR1 (ENSGGOG00000013977) #14	MAFG (ENSGGOG00000026754) #15	ENSGGOG00000037341	SIRT7 (ENSGGOG00000013961) #16	PCYT2 (ENSGGOG00000013953) #17	NPB (ENSGGOG00000013944) #18	ENSGGOG00000013938	ALYREF (ENSGGOG00000013935) #20	ENSGGOG00000011564 #21	P4HB (ENSGGOG00000023842) #22	PPP1R27 (ENSGGOG00000006880) #23	ENSGGOG00000003494 #26	MRPL12 (ENSGGOG00000009356) #27	HGS (ENSGGOG00000009345) #28	ARL16 (ENSGGOG00000009339) #29	CCDC137 (ENSGGOG00000009333) #30	OXLD1 (ENSGGOG00000009332) #31	ENSGGOG00000015384 #32	TSPAN10 (ENSGGOG00000015380) #33	NPLOC4 (ENSGGOG00000004220) #34	FAAP100 (ENSGGOG00000004214)	ENSGGOG00000027785 #35	ACTG1 (ENSGGOG00000014043)	BAHCC1 (ENSGGOG00000006265) #36	ENSGGOG00000040343 #37
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148054	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169.a #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.`b
Human	MODERN SPECIES	8	DCXR (ENSG00000169738) #7	RAC3 (ENSG00000169750) #8	LRRC45 (ENSG00000169683) #9	CENPX (ENSG00000169689) #10	ASPSCR1 (ENSG00000169696) #11	NOTUM (ENSG00000185269) #12	MYADML2 (ENSG00000185105) #13	PYCR1 (ENSG00000183010) #14	MAFG (ENSG00000197063) #15	SIRT7 (ENSG00000187531) #16	PCYT2 (ENSG00000185813) #17	NPB (ENSG00000183979) #18	ANAPC11 (ENSG00000141552) #19	ALYREF (ENSG00000183684) #20	ARHGDIA (ENSG00000141522) #21	P4HB (ENSG00000185624) #22	PPP1R27 (ENSG00000182676) #23	MCRIP1 (ENSG00000225663) #24	GCGR (ENSG00000215644) #25	SLC25A10 (ENSG00000183048) #26	ENSG00000262660	MRPL12 (ENSG00000262814) #27	HGS (ENSG00000185359) #28	ARL16 (ENSG00000214087) #29	CCDC137 (ENSG00000185298) #30	OXLD1 (ENSG00000204237) #31	PDE6G (ENSG00000185527) #32	TSPAN10 (ENSG00000182612) #33	NPLOC4 (ENSG00000182446) #34	FAAP100 (ENSG00000185504)	FSCN2 (ENSG00000186765) #35
Pan	ANCESTRAL SPECIES	3	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00940000165025	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148054	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00940000164946	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00910000148896	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00950000185883	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169.a #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682
Chimpanzee	MODERN SPECIES	8	RAC3 (ENSPTRG00000014331) #8	LRRC45 (ENSPTRG00000009784) #9	CENPX (ENSPTRG00000009783)	ASPSCR1 (ENSPTRG00000009782) #11	NOTUM (ENSPTRG00000009781) #12	MYADML2 (ENSPTRG00000049454) #13	PYCR1 (ENSPTRG00000009777) #14	MAFG (ENSPTRG00000052436) #15	SIRT7 (ENSPTRG00000030739) #16	PCYT2 (ENSPTRG00000009776) #17	NPB (ENSPTRG00000045453) #18	ANAPC11 (ENSPTRG00000009775)	ALYREF (ENSPTRG00000009774) #20	ARHGDIA (ENSPTRG00000009773) #21	ENSPTRG00000044598	P4HB (ENSPTRG00000009772) #22	PPP1R27 (ENSPTRG00000009771) #23	MCRIP1 (ENSPTRG00000041870) #24	GCGR (ENSPTRG00000034006) #25	ENSPTRG00000046873	SLC25A10 (ENSPTRG00000009770) #26	MRPL12 (ENSPTRG00000043438) #27	HGS (ENSPTRG00000009768) #28	ARL16 (ENSPTRG00000030016) #29	CCDC137 (ENSPTRG00000009767) #30	OXLD1 (ENSPTRG00000030740) #31	PDE6G (ENSPTRG00000045047) #32	NPLOC4 (ENSPTRG00000009764) #34	FAAP100 (ENSPTRG00000009763)	FSCN2 (ENSPTRG00000030742) #35	ACTG1 (ENSPTRG00000048969)
Bonobo	MODERN SPECIES	8	DCXR (ENSPPAG00000036486) #7	LRRC45 (ENSPPAG00000029655) #9	ENSPPAG00000029637	ASPSCR1 (ENSPPAG00000040568) #11	ENSPPAG00000036303 #12	MYADML2 (ENSPPAG00000002610) #13	PYCR1 (ENSPPAG00000039994) #14	MAFG (ENSPPAG00000035385) #15	ENSPPAG00000013704	SIRT7 (ENSPPAG00000035571) #16	PCYT2 (ENSPPAG00000032334) #17	ENSPPAG00000003458	ENSPPAG00000036403	ENSPPAG00000035710 #21	ENSPPAG00000031080	P4HB (ENSPPAG00000035479) #22	PPP1R27 (ENSPPAG00000043740) #23	ENSPPAG00000038894 #24	GCGR (ENSPPAG00000034213) #25	ENSPPAG00000025843	ENSPPAG00000033525 #26	MRPL12 (ENSPPAG00000042009) #27	HGS (ENSPPAG00000042127) #28	ARL16 (ENSPPAG00000027260) #29	CCDC137 (ENSPPAG00000041503) #30	OXLD1 (ENSPPAG00000027500) #31	ENSPPAG00000029079 #32	TSPAN10 (ENSPPAG00000042359) #33	NPLOC4 (ENSPPAG00000027853) #34	FAAP100 (ENSPPAG00000037798)	FSCN2 (ENSPPAG00000041749) #35
Orangutan	MODERN SPECIES	8	RFNG (ENSPPYG00000037173)	DCXR (ENSPPYG00000008764) #7	RAC3 (ENSPPYG00000008763) #8	LRRC45 (ENSPPYG00000008762) #9	CENPX (ENSPPYG00000008761) #10	ASPSCR1 (ENSPPYG00000008760) #11	NOTUM (ENSPPYG00000008758) #12	PYCR1 (ENSPPYG00000008755) #14	MAFG (ENSPPYG00000040384) #15	SIRT7 (ENSPPYG00000008753) #16	PCYT2 (ENSPPYG00000008752) #17	NPB (ENSPPYG00000008751) #18	ANAPC11 (ENSPPYG00000008750)	ALYREF (ENSPPYG00000008749) #20	ENSPPYG00000008748 #21	P4HB (ENSPPYG00000008747) #22	PPP1R27 (ENSPPYG00000008746) #23	MCRIP1 (ENSPPYG00000035026) #24	ENSPPYG00000029603 #25	SLC25A10 (ENSPPYG00000008745) #26	MRPL12 (ENSPPYG00000008744) #27	HGS (ENSPPYG00000008743) #28	CCDC137 (ENSPPYG00000039503) #30	OXLD1 (ENSPPYG00000008740) #31	PDE6G (ENSPPYG00000008739) #32	TSPAN10 (ENSPPYG00000008738) #33	NPLOC4 (ENSPPYG00000008737) #34	FAAP100 (ENSPPYG00000008736)	FSCN2 (ENSPPYG00000037969) #35	ACTG1 (ENSPPYG00000008735)	BAHCC1 (ENSPPYG00000008734) #36
Gibbon	MODERN SPECIES	150											MYADML2 (ENSNLEG00000033784) #13	PYCR1 (ENSNLEG00000010327) #14	ENSNLEG00000036312 #18	ENSNLEG00000010318	ALYREF (ENSNLEG00000010313) #20	P4HB (ENSNLEG00000010292) #22	ENSNLEG00000010312 #21	ENSNLEG00000033493 #24	PPP1R27 (ENSNLEG00000010287) #23	GCGR (ENSNLEG00000010273) #25
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615.d.a #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190.b #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.`b.b
Cebidae	ANCESTRAL SPECIES	25	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615.d.a #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190.b #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.`b.b
Cebidae_a	ANCESTRAL SPECIES	17	ENSGT00940000160801	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615.d.a #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190.b #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.`b.b
Capuchin	MODERN SPECIES	36	ENSCCAG00000036572	DCXR (ENSCCAG00000030102) #7	RAC3 (ENSCCAG00000031933) #8	LRRC45 (ENSCCAG00000031490) #9	CENPX (ENSCCAG00000022690) #10	ASPSCR1 (ENSCCAG00000026319) #11	NOTUM (ENSCCAG00000025020) #12	PYCR1 (ENSCCAG00000025166) #14	MAFG (ENSCCAG00000029928) #15	SIRT7 (ENSCCAG00000035064) #16	PCYT2 (ENSCCAG00000034619) #17	NPB (ENSCCAG00000019863) #18	ANAPC11 (ENSCCAG00000032402) #19	ENSCCAG00000020578 #20	ARHGDIA (ENSCCAG00000032208) #21	P4HB (ENSCCAG00000036326) #22	PPP1R27 (ENSCCAG00000029731) #23	MCRIP1 (ENSCCAG00000021803) #24	GCGR (ENSCCAG00000029495) #25	SLC25A10 (ENSCCAG00000023086) #26	MRPL12 (ENSCCAG00000026887) #27	HGS (ENSCCAG00000031186) #28	ARL16 (ENSCCAG00000022659) #29	CCDC137 (ENSCCAG00000036148) #30	OXLD1 (ENSCCAG00000028315) #31	PDE6G (ENSCCAG00000029657) #32	TSPAN10 (ENSCCAG00000022262) #33	NPLOC4 (ENSCCAG00000025242) #34	FAAP100 (ENSCCAG00000038034)	FSCN2 (ENSCCAG00000023280) #35	ACTG1 (ENSCCAG00000027615)
Bolivian squirrel monkey	MODERN SPECIES	88	GPS1 (ENSSBOG00000023400)	RFNG (ENSSBOG00000035036)	DCXR (ENSSBOG00000017147) #7	RAC3 (ENSSBOG00000008502) #8	LRRC45 (ENSSBOG00000030622) #9	CENPX (ENSSBOG00000029373) #10	ASPSCR1 (ENSSBOG00000032498) #11	NOTUM (ENSSBOG00000030709) #12	PYCR1 (ENSSBOG00000034483) #14	MAFG (ENSSBOG00000036145) #15	SIRT7 (ENSSBOG00000033138) #16	PCYT2 (ENSSBOG00000019320) #17	ANAPC11 (ENSSBOG00000021940) #19	ENSSBOG00000030924	ARHGDIA (ENSSBOG00000020639) #21	P4HB (ENSSBOG00000022554) #22	PPP1R27 (ENSSBOG00000014736) #23	MCRIP1 (ENSSBOG00000022922) #24	GCGR (ENSSBOG00000034949) #25	SLC25A10 (ENSSBOG00000021807) #26	MRPL12 (ENSSBOG00000033734) #27	HGS (ENSSBOG00000018546) #28	ARL16 (ENSSBOG00000021405) #29	CCDC137 (ENSSBOG00000022756) #30	PDE6G (ENSSBOG00000020447) #32	TSPAN10 (ENSSBOG00000028820) #33	NPLOC4 (ENSSBOG00000035967) #34	FAAP100 (ENSSBOG00000015919)	FSCN2 (ENSSBOG00000020093) #35	ENSSBOG00000034298	BAHCC1 (ENSSBOG00000021085) #36
Marmoset	MODERN SPECIES	17	RAC3 (ENSCJAG00000018194) #8	LRRC45 (ENSCJAG00000018201) #9	ENSCJAG00000046033 #10	ASPSCR1 (ENSCJAG00000018216) #11	NOTUM (ENSCJAG00000018236) #12	MYADML2 (ENSCJAG00000047053) #13	ENSCJAG00000074966	PYCR1 (ENSCJAG00000018243) #14	MAFG (ENSCJAG00000018272) #15	SIRT7 (ENSCJAG00000018273) #16	PCYT2 (ENSCJAG00000018279) #17	NPB (ENSCJAG00000018299) #18	ANAPC11 (ENSCJAG00000087043) #19	ALYREF (ENSCJAG00000039942) #20	ENSCJAG00000047620 #21	P4HB (ENSCJAG00000002940) #22	PPP1R27 (ENSCJAG00000002956) #23	ENSCJAG00000002959 #24	GCGR (ENSCJAG00000002966) #25	SLC25A10 (ENSCJAG00000001659) #26	MRPL12 (ENSCJAG00000001652) #27	HGS (ENSCJAG00000001631) #28	ARL16 (ENSCJAG00000001596) #29	CCDC137 (ENSCJAG00000001630) #30	OXLD1 (ENSCJAG00000001620) #31	PDE6G (ENSCJAG00000044903) #32	TSPAN10 (ENSCJAG00000001598) #33	NPLOC4 (ENSCJAG00000001569) #34	FAAP100 (ENSCJAG00000001556)	FSCN2 (ENSCJAG00000001539) #35	ACTG1 (ENSCJAG00000002885)
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	1059	GPS1 (ENSANAG00000034839)	RFNG (ENSANAG00000037889)	DCXR (ENSANAG00000037278) #7	RAC3 (ENSANAG00000022136) #8	LRRC45 (ENSANAG00000021336) #9	ENSANAG00000023211	ENSANAG00000031931 #11	NOTUM (ENSANAG00000021623) #12	PYCR1 (ENSANAG00000024949) #14	MAFG (ENSANAG00000026345) #15	SIRT7 (ENSANAG00000033239) #16	PCYT2 (ENSANAG00000031988) #17	ENSANAG00000026259	ENSANAG00000022638 #20	ENSANAG00000028198 #21	ENSANAG00000029411 #22	PPP1R27 (ENSANAG00000037087) #23	MCRIP1 (ENSANAG00000023764) #24	GCGR (ENSANAG00000034898) #25	SLC25A10 (ENSANAG00000021908) #26	ENSANAG00000037237 #27	HGS (ENSANAG00000021392) #28	ARL16 (ENSANAG00000029434) #29	CCDC137 (ENSANAG00000028812) #30	OXLD1 (ENSANAG00000031803) #31	PDE6G (ENSANAG00000031926) #32	TSPAN10 (ENSANAG00000022946) #33	NPLOC4 (ENSANAG00000035556) #34	FAAP100 (ENSANAG00000038098)	FSCN2 (ENSANAG00000024711) #35	ENSANAG00000027813
Mas night monkey	MODERN SPECIES	94																ENSANAG00000023029 #22
Tarsier	MODERN SPECIES	4844							NOTUM (ENSTSYG00000030896) #12	PYCR1 (ENSTSYG00000002648) #14	MAFG (ENSTSYG00000031519) #15	SIRT7 (ENSTSYG00000027164) #16	PCYT2 (ENSTSYG00000032603) #17	NPB (ENSTSYG00000035787) #18	ANAPC11 (ENSTSYG00000030040) #19	ALYREF (ENSTSYG00000002272) #20	ARHGDIA (ENSTSYG00000029586) #21	P4HB (ENSTSYG00000008025) #22	PPP1R27 (ENSTSYG00000030024) #23	MCRIP1 (ENSTSYG00000036465) #24	GCGR (ENSTSYG00000029406) #25
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Lemuriformes_a	ANCESTRAL SPECIES	18	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Coquerels sifaka	MODERN SPECIES	656	RFNG (ENSPCOG00000027068)	DCXR (ENSPCOG00000016697) #7	RAC3 (ENSPCOG00000005075) #8	LRRC45 (ENSPCOG00000020379) #9	CENPX (ENSPCOG00000022741) #10	ASPSCR1 (ENSPCOG00000024356) #11	NOTUM (ENSPCOG00000013817) #12	PYCR1 (ENSPCOG00000027617) #14	MAFG (ENSPCOG00000022466) #15	SIRT7 (ENSPCOG00000024297) #16	PCYT2 (ENSPCOG00000026174) #17	NPB (ENSPCOG00000026250) #18	ANAPC11 (ENSPCOG00000028206) #19	ALYREF (ENSPCOG00000020874) #20	ARHGDIA (ENSPCOG00000001949) #21	P4HB (ENSPCOG00000018728) #22	PPP1R27 (ENSPCOG00000024253) #23	MCRIP1 (ENSPCOG00000021144) #24	GCGR (ENSPCOG00000028818) #25	SLC25A10 (ENSPCOG00000020713) #26	MRPL12 (ENSPCOG00000016998) #27	HGS (ENSPCOG00000016292) #28	ARL16 (ENSPCOG00000015012) #29	CCDC137 (ENSPCOG00000028431) #30	OXLD1 (ENSPCOG00000028305) #31	PDE6G (ENSPCOG00000008591) #32	TSPAN10 (ENSPCOG00000027460) #33	NPLOC4 (ENSPCOG00000014788) #34	FAAP100 (ENSPCOG00000028605)	FSCN2 (ENSPCOG00000027028) #35	ACTG1 (ENSPCOG00000023063)
Greater bamboo lemur	MODERN SPECIES	344	RAC3 (ENSPSMG00000012588) #8	LRRC45 (ENSPSMG00000012641) #9	CENPX (ENSPSMG00000012724) #10	ENSPSMG00000012728 #11	NOTUM (ENSPSMG00000012743) #12	MYADML2 (ENSPSMG00000012748) #13	PYCR1 (ENSPSMG00000012854) #14	MAFG (ENSPSMG00000013011) #15	ENSPSMG00000013013	SIRT7 (ENSPSMG00000013022) #16	PCYT2 (ENSPSMG00000013098) #17	NPB (ENSPSMG00000013167) #18	ANAPC11 (ENSPSMG00000013175) #19	ALYREF (ENSPSMG00000013213) #20	ARHGDIA (ENSPSMG00000013244) #21	P4HB (ENSPSMG00000013354) #22	PPP1R27 (ENSPSMG00000013498) #23	MCRIP1 (ENSPSMG00000013522) #24	GCGR (ENSPSMG00000013539) #25	ENSPSMG00000013542	SLC25A10 (ENSPSMG00000013551) #26	MRPL12 (ENSPSMG00000013574) #27	HGS (ENSPSMG00000013773) #28	ARL16 (ENSPSMG00000013816) #29	CCDC137 (ENSPSMG00000013823) #30	OXLD1 (ENSPSMG00000013829) #31	PDE6G (ENSPSMG00000013839) #32	TSPAN10 (ENSPSMG00000013845) #33	NPLOC4 (ENSPSMG00000013870) #34	FAAP100 (ENSPSMG00000013890)
Mouse lemur	MODERN SPECIES	7	DCXR (ENSMICG00000027972) #7	RAC3 (ENSMICG00000001114) #8	LRRC45 (ENSMICG00000036749) #9	ENSMICG00000046784 #10	ENSMICG00000042410 #10	ASPSCR1 (ENSMICG00000001102) #11	NOTUM (ENSMICG00000034707) #12	PYCR1 (ENSMICG00000004071) #14	MAFG (ENSMICG00000037828) #15	SIRT7 (ENSMICG00000017412) #16	PCYT2 (ENSMICG00000017409) #17	NPB (ENSMICG00000017408) #18	ANAPC11 (ENSMICG00000045567) #19	ALYREF (ENSMICG00000017403) #20	ARHGDIA (ENSMICG00000002895) #21	P4HB (ENSMICG00000001144) #22	PPP1R27 (ENSMICG00000044822) #23	MCRIP1 (ENSMICG00000028892) #24	GCGR (ENSMICG00000028550) #25	SLC25A10 (ENSMICG00000008678) #26	MRPL12 (ENSMICG00000047418) #27	HGS (ENSMICG00000008647) #28	ARL16 (ENSMICG00000036087) #29	CCDC137 (ENSMICG00000008641) #30	OXLD1 (ENSMICG00000008636) #31	PDE6G (ENSMICG00000008627) #32	TSPAN10 (ENSMICG00000008615) #33	NPLOC4 (ENSMICG00000008580) #34	FAAP100 (ENSMICG00000008568)	FSCN2 (ENSMICG00000031762) #35	ACTG1 (ENSMICG00000014863)
Bushbaby	MODERN SPECIES	133	RFNG (ENSOGAG00000015248)	DCXR (ENSOGAG00000012468) #7	RAC3 (ENSOGAG00000012467) #8	CENPX (ENSOGAG00000009243) #10	LRRC45 (ENSOGAG00000012458) #9	ASPSCR1 (ENSOGAG00000012451) #11	NOTUM (ENSOGAG00000015213) #12	MYADML2 (ENSOGAG00000031689) #13	PYCR1 (ENSOGAG00000015203) #14	SIRT7 (ENSOGAG00000030109) #16	PCYT2 (ENSOGAG00000026050) #17	NPB (ENSOGAG00000029667) #18	ANAPC11 (ENSOGAG00000025200) #19	ALYREF (ENSOGAG00000012409) #20	ARHGDIA (ENSOGAG00000030348) #21	P4HB (ENSOGAG00000002373) #22	PPP1R27 (ENSOGAG00000002372) #23	MCRIP1 (ENSOGAG00000025695) #24	GCGR (ENSOGAG00000031238) #25	SLC25A10 (ENSOGAG00000003671) #26	MRPL12 (ENSOGAG00000005297) #27	HGS (ENSOGAG00000005291) #28	ARL16 (ENSOGAG00000025368) #29	CCDC137 (ENSOGAG00000011125) #30	OXLD1 (ENSOGAG00000011121) #31	PDE6G (ENSOGAG00000011117) #32	TSPAN10 (ENSOGAG00000028807) #33	NPLOC4 (ENSOGAG00000015173) #34	FAAP100 (ENSOGAG00000007492)	FSCN2 (ENSOGAG00000028396) #35	ACTG1 (ENSOGAG00000008040)
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00940000160116 #36
Tree shrew	MODERN SPECIES	4571																ENSTBEG00000002061 #22
Glires	ANCESTRAL SPECIES	3	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00940000160116 #36
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853.d #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.db.a
Marmotini	ANCESTRAL SPECIES	36	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853.d #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.db.a
Marmotini_b	ANCESTRAL SPECIES	20	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853.d #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00910000148243	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.db.a
Arctic ground squirrel	MODERN SPECIES	470	LRRC45 (ENSUPAG00010000745) #9	CENPX (ENSUPAG00010000729) #10	ASPSCR1 (ENSUPAG00010000586) #11	NOTUM (ENSUPAG00010000559) #12	MYADML2 (ENSUPAG00010000551) #13	PYCR1 (ENSUPAG00010000543) #14	ENSUPAG00010000535	MAFG (ENSUPAG00010000525) #15	SIRT7 (ENSUPAG00010000513) #16	NPB (ENSUPAG00010000504) #18	PCYT2 (ENSUPAG00010000437) #17	ANAPC11 (ENSUPAG00010000424) #19	ENSUPAG00010000411	ALYREF (ENSUPAG00010000402) #20	ARHGDIA (ENSUPAG00010000396) #21	P4HB (ENSUPAG00010000365) #22	PPP1R27 (ENSUPAG00010000343) #23	MCRIP1 (ENSUPAG00010000327) #24	SLC25A10 (ENSUPAG00010000161) #26	MRPL12 (ENSUPAG00010000143) #27	HGS (ENSUPAG00010000083) #28	ARL16 (ENSUPAG00010000027) #29	CCDC137 (ENSUPAG00010019712) #30	OXLD1 (ENSUPAG00010019709) #31	PDE6G (ENSUPAG00010019703) #32	TSPAN10 (ENSUPAG00010019685) #33	NPLOC4 (ENSUPAG00010019627) #34	FAAP100 (ENSUPAG00010019610)	FSCN2 (ENSUPAG00010019602) #35	ENSUPAG00010019594	BAHCC1 (ENSUPAG00010019471) #36
Squirrel	MODERN SPECIES	194	DCXR (ENSSTOG00000028714) #7	RAC3 (ENSSTOG00000014015) #8	LRRC45 (ENSSTOG00000007315) #9	CENPX (ENSSTOG00000030309) #10	ASPSCR1 (ENSSTOG00000006300) #11	NOTUM (ENSSTOG00000006274) #12	ENSSTOG00000006267 #13	PYCR1 (ENSSTOG00000014080) #14	MAFG (ENSSTOG00000024966) #15	SIRT7 (ENSSTOG00000006241) #16	PCYT2 (ENSSTOG00000006219) #17	NPB (ENSSTOG00000025278) #18	ANAPC11 (ENSSTOG00000027337) #19	ENSSTOG00000016570	ARHGDIA (ENSSTOG00000015756) #21	P4HB (ENSSTOG00000026026) #22	PPP1R27 (ENSSTOG00000028022) #23	MCRIP1 (ENSSTOG00000025718) #24	GCGR (ENSSTOG00000027046) #25	SLC25A10 (ENSSTOG00000029677) #26	MRPL12 (ENSSTOG00000031761) #27	HGS (ENSSTOG00000000091) #28	ARL16 (ENSSTOG00000025354) #29	CCDC137 (ENSSTOG00000000089) #30	PDE6G (ENSSTOG00000000085) #32	TSPAN10 (ENSSTOG00000000083) #33	NPLOC4 (ENSSTOG00000000080) #34	FAAP100 (ENSSTOG00000000078)	FSCN2 (ENSSTOG00000028223) #35	ENSSTOG00000006868	BAHCC1 (ENSSTOG00000021534) #36
Alpin marmot	MODERN SPECIES	90	DCXR (ENSMMMG00000004960) #7	RAC3 (ENSMMMG00000004991) #8	LRRC45 (ENSMMMG00000005027) #9	CENPX (ENSMMMG00000005068) #10	ASPSCR1 (ENSMMMG00000005107) #11	NOTUM (ENSMMMG00000005284) #12	MYADML2 (ENSMMMG00000005339) #13	PYCR1 (ENSMMMG00000005348) #14	MAFG (ENSMMMG00000005373) #15	ENSMMMG00000005384	ENSMMMG00000005394	ENSMMMG00000005400 #16	PCYT2 (ENSMMMG00000005412) #17	ANAPC11 (ENSMMMG00000005453) #19	ARHGDIA (ENSMMMG00000005480) #21	P4HB (ENSMMMG00000005494) #22	MCRIP1 (ENSMMMG00000005529) #24	SLC25A10 (ENSMMMG00000005551) #26	MRPL12 (ENSMMMG00000005577) #27	HGS (ENSMMMG00000005586) #28	ARL16 (ENSMMMG00000005609) #29	CCDC137 (ENSMMMG00000005620) #30	ENSMMMG00000005731 #31	TSPAN10 (ENSMMMG00000005734) #33	PDE6G (ENSMMMG00000005769) #32	NPLOC4 (ENSMMMG00000005787) #34	FAAP100 (ENSMMMG00000005853)	FSCN2 (ENSMMMG00000006216) #35	ACTG1 (ENSMMMG00000006224)	SLC38A10 (ENSMMMG00000006531)	TEPSIN (ENSMMMG00000006619)
Eurasian red squirrel	MODERN SPECIES	12	CENPX (ENSSVLG00005016768) #10	ENSSVLG00005016908 #11	ENSSVLG00005016920	ENSSVLG00005016958 #11	NOTUM (ENSSVLG00005016990) #12	MYADML2 (ENSSVLG00005017144) #13	PYCR1 (ENSSVLG00005017184) #14	MAFG (ENSSVLG00005017296) #15	SIRT7 (ENSSVLG00005017343) #16	PCYT2 (ENSSVLG00005017544) #17	NPB (ENSSVLG00005018182) #18	ANAPC11 (ENSSVLG00005018201) #19	ENSSVLG00005018234	ALYREF (ENSSVLG00005018278) #20	ARHGDIA (ENSSVLG00005018349) #21	P4HB (ENSSVLG00005018406) #22	PPP1R27 (ENSSVLG00005018481) #23	MCRIP1 (ENSSVLG00005018541) #24	GCGR (ENSSVLG00005018678) #25	SLC25A10 (ENSSVLG00005018780) #26	MRPL12 (ENSSVLG00005018826) #27	ARL16 (ENSSVLG00005018922) #29	CCDC137 (ENSSVLG00005019032) #30	OXLD1 (ENSSVLG00005019115) #31	PDE6G (ENSSVLG00005019138) #32	TSPAN10 (ENSSVLG00005019196) #33	NPLOC4 (ENSSVLG00005019392) #34	FAAP100 (ENSSVLG00005019478)	FSCN2 (ENSSVLG00005019552) #35	ENSSVLG00005019596	BAHCC1 (ENSSVLG00005019700) #36
Hystricomorpha	ANCESTRAL SPECIES	24	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00980000200442	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
Hystricomorpha_a	ANCESTRAL SPECIES	19	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
Hystricomorpha_b	ANCESTRAL SPECIES	12	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
Long-tailed chinchilla	MODERN SPECIES	213	RFNG (ENSCLAG00000009349)	DCXR (ENSCLAG00000008146) #7	RAC3 (ENSCLAG00000010501) #8	LRRC45 (ENSCLAG00000004763) #9	CENPX (ENSCLAG00000004656) #10	ASPSCR1 (ENSCLAG00000004696) #11	NOTUM (ENSCLAG00000006719) #12	ENSCLAG00000006916 #13	PYCR1 (ENSCLAG00000007608) #14	MAFG (ENSCLAG00000007854) #15	SIRT7 (ENSCLAG00000004980) #16	PCYT2 (ENSCLAG00000006792) #17	NPB (ENSCLAG00000012664) #18	ALYREF (ENSCLAG00000015026) #20	ARHGDIA (ENSCLAG00000006205) #21	P4HB (ENSCLAG00000007202) #22	PPP1R27 (ENSCLAG00000007730) #23	MCRIP1 (ENSCLAG00000007829) #24	GCGR (ENSCLAG00000015161) #25	SLC25A10 (ENSCLAG00000014262) #26	MRPL12 (ENSCLAG00000012764) #27	HGS (ENSCLAG00000013050) #28	ARL16 (ENSCLAG00000013425) #29	CCDC137 (ENSCLAG00000013900) #30	OXLD1 (ENSCLAG00000012707) #31	PDE6G (ENSCLAG00000005896) #32	TSPAN10 (ENSCLAG00000006657) #33	NPLOC4 (ENSCLAG00000007199) #34	FAAP100 (ENSCLAG00000012330)	FSCN2 (ENSCLAG00000014531) #35	ACTG1 (ENSCLAG00000008725)
Degu	MODERN SPECIES	153	RFNG (ENSODEG00000007530)	DCXR (ENSODEG00000009244) #7	RAC3 (ENSODEG00000007852) #8	LRRC45 (ENSODEG00000007475) #9	CENPX (ENSODEG00000011229) #10	ASPSCR1 (ENSODEG00000009351) #11	NOTUM (ENSODEG00000008781) #12	ENSODEG00000009159 #13	ENSODEG00000008271 #14	MAFG (ENSODEG00000008381) #15	SIRT7 (ENSODEG00000008260) #16	PCYT2 (ENSODEG00000008954) #17	ANAPC11 (ENSODEG00000007931) #19	ALYREF (ENSODEG00000008359) #20	ENSODEG00000009046 #21	P4HB (ENSODEG00000009563) #22	PPP1R27 (ENSODEG00000010740) #23	MCRIP1 (ENSODEG00000007940) #24	GCGR (ENSODEG00000008460) #25	ENSODEG00000008220	SLC25A10 (ENSODEG00000008541) #26	MRPL12 (ENSODEG00000008765) #27	HGS (ENSODEG00000007976) #28	ARL16 (ENSODEG00000008186) #29	CCDC137 (ENSODEG00000009523) #30	OXLD1 (ENSODEG00000009077) #31	PDE6G (ENSODEG00000009291) #32	TSPAN10 (ENSODEG00000009598) #33	NPLOC4 (ENSODEG00000008315) #34	ENSODEG00000008214	FSCN2 (ENSODEG00000008403) #35
Guinea pig	MODERN SPECIES	76	ENSCPOG00000031500 ##7	Dcxr (ENSCPOG00000026566) #7	RAC3 (ENSCPOG00000013861) #8	LRRC45 (ENSCPOG00000013857) #9	CENPX (ENSCPOG00000035990) #10	ASPSCR1 (ENSCPOG00000014896) #11	NOTUM (ENSCPOG00000012400) #12	MYADML2 (ENSCPOG00000002048) #13	PYCR1 (ENSCPOG00000002045) #14	MAFG (ENSCPOG00000039459) #15	SIRT7 (ENSCPOG00000001834) #16	PCYT2 (ENSCPOG00000001826) #17	ANAPC11 (ENSCPOG00000013713) #19	ALYREF (ENSCPOG00000013710) #20	ARHGDIA (ENSCPOG00000039804) #21	P4HB (ENSCPOG00000012247) #22	PPP1R27 (ENSCPOG00000015239) #23	MCRIP1 (ENSCPOG00000040444) #24	GCGR (ENSCPOG00000025298) #25	SLC25A10 (ENSCPOG00000037669) #26	MRPL12 (ENSCPOG00000035389) #27	HGS (ENSCPOG00000020715) #28	ARL16 (ENSCPOG00000034122) #29	CCDC137 (ENSCPOG00000012535) #30	ENSCPOG00000012543 #31	PDE6G (ENSCPOG00000022389) #32	TSPAN10 (ENSCPOG00000022223) #33	NPLOC4 (ENSCPOG00000007800) #34	FAAP100 (ENSCPOG00000001797)	FSCN2 (ENSCPOG00000007000) #35	ACTG1 (ENSCPOG00000012101)
Naked mole-rat female	MODERN SPECIES	12	ENSHGLG00000005948 ##7	DCXR (ENSHGLG00000010061) #7	RAC3 (ENSHGLG00000009062) #8	LRRC45 (ENSHGLG00000006712) #9	ENSHGLG00000005308 #10	ASPSCR1 (ENSHGLG00000005080) #11	NOTUM (ENSHGLG00000048049) #12	PYCR1 (ENSHGLG00000007472) #14	MAFG (ENSHGLG00000006417) #15	SIRT7 (ENSHGLG00000005752) #16	PCYT2 (ENSHGLG00000004533) #17	NPB (ENSHGLG00000040297) #18	ENSHGLG00000037408	ALYREF (ENSHGLG00000008293) #20	ARHGDIA (ENSHGLG00000046286) #21	P4HB (ENSHGLG00000006261) #22	PPP1R27 (ENSHGLG00000005910) #23	ENSHGLG00000005222 #24	GCGR (ENSHGLG00000004371) #25	SLC25A10 (ENSHGLG00000010287) #26	MRPL12 (ENSHGLG00000009470) #27	HGS (ENSHGLG00000008394) #28	ARL16 (ENSHGLG00000033015) #29	CCDC137 (ENSHGLG00000044667) #30	OXLD1 (ENSHGLG00000040014) #31	PDE6G (ENSHGLG00000008357) #32	TSPAN10 (ENSHGLG00000013685) #33	ENSHGLG00000015156 #34	FAAP100 (ENSHGLG00000012377)	FSCN2 (ENSHGLG00000012271) #35	ACTG1 (ENSHGLG00000009170)
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00390000018868.B.a	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
Myomorpha	ANCESTRAL SPECIES		ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00390000018868.B.a	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
Muroidea	ANCESTRAL SPECIES		ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00390000018868.B.a	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
Chinese hamster chok1gshd	MODERN SPECIES	33	Dcxr (ENSCGRG00001017915) #7	Rac3 (ENSCGRG00001008888) #8	Lrrc45 (ENSCGRG00001005546) #9	ENSCGRG00001016087 #10	Aspscr1 (ENSCGRG00001019355) #11	Notum (ENSCGRG00001018427) #12	Myadml2 (ENSCGRG00001012791) #13	Pycr1 (ENSCGRG00001023800) #14	Mafg (ENSCGRG00001012472) #15	Sirt7 (ENSCGRG00001002007) #16	Pcyt2 (ENSCGRG00001012913) #17	Npb (ENSCGRG00001020216) #18	Anapc11 (ENSCGRG00001015542) #19	ENSCGRG00001018191 #20	Arhgdia (ENSCGRG00001012259) #21	P4hb (ENSCGRG00001013338) #22	Ppp1r27 (ENSCGRG00001017436) #23	Mcrip1 (ENSCGRG00001015558) #24	Gcgr (ENSCGRG00001002021) #25	Slc25a10 (ENSCGRG00001011885) #26	Mrpl12 (ENSCGRG00001005393) #27	Hgs (ENSCGRG00001012073) #28	Arl16 (ENSCGRG00001019590) #29	Ccdc137 (ENSCGRG00001014661) #30	Oxld1 (ENSCGRG00001011365) #31	Pde6g (ENSCGRG00001020369) #32	Tspan10 (ENSCGRG00001016047) #33	Nploc4 (ENSCGRG00001002455) #34	Faap100 (ENSCGRG00001019784)	Fscn2 (ENSCGRG00001025013) #35	ENSCGRG00001018151
Golden Hamster	MODERN SPECIES	637	Dcxr (ENSMAUG00000010205) #7	Rac3 (ENSMAUG00000000969) #8	Lrrc45 (ENSMAUG00000001954) #9	ENSMAUG00000008165 #10	Aspscr1 (ENSMAUG00000015340) #11	Notum (ENSMAUG00000016212) #12	Myadml2 (ENSMAUG00000010009) #13	Pycr1 (ENSMAUG00000000981) #14	Mafg (ENSMAUG00000001866) #15	Sirt7 (ENSMAUG00000018180) #16	Pcyt2 (ENSMAUG00000010875) #17	ENSMAUG00000011011	ENSMAUG00000019133	ENSMAUG00000020552 #20	Arhgdia (ENSMAUG00000008500) #21	P4hb (ENSMAUG00000018291) #22	Ppp1r27 (ENSMAUG00000016632) #23	Mcrip1 (ENSMAUG00000012088) #24	Gcgr (ENSMAUG00000015684) #25	Slc25a10 (ENSMAUG00000007362) #26	Mrpl12 (ENSMAUG00000002006) #27	Hgs (ENSMAUG00000016516) #28	Arl16 (ENSMAUG00000018972) #29	Ccdc137 (ENSMAUG00000004196) #30	Oxld1 (ENSMAUG00000009281) #31	Nploc4 (ENSMAUG00000021902) #34	Faap100 (ENSMAUG00000014683)	Fscn2 (ENSMAUG00000009857) #35	ENSMAUG00000001903	Bahcc1 (ENSMAUG00000018908) #36	Slc38a10 (ENSMAUG00000018952)
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
Northern American deer mouse	MODERN SPECIES	21	Dcxr (ENSPEMG00000009098) #7	Rac3 (ENSPEMG00000009937) #8	Lrrc45 (ENSPEMG00000016658) #9	ENSPEMG00000018378 #10	Aspscr1 (ENSPEMG00000012088) #11	Notum (ENSPEMG00000010256) #12	ENSPEMG00000024900 #13	Pycr1 (ENSPEMG00000012558) #14	Mafg (ENSPEMG00000029910) #15	ENSPEMG00000027576	Sirt7 (ENSPEMG00000017472) #16	Pcyt2 (ENSPEMG00000014047) #17	Anapc11 (ENSPEMG00000026279) #19	ENSPEMG00000016628	Arhgdia (ENSPEMG00000029058) #21	P4hb (ENSPEMG00000006459) #22	Ppp1r27 (ENSPEMG00000009995) #23	Mcrip1 (ENSPEMG00000030186) #24	Gcgr (ENSPEMG00000018876) #25	Slc25a10 (ENSPEMG00000013208) #26	Mrpl12 (ENSPEMG00000005848) #27	Hgs (ENSPEMG00000017135) #28	Arl16 (ENSPEMG00000030750) #29	Ccdc137 (ENSPEMG00000019141) #30	Oxld1 (ENSPEMG00000012364) #31	Pde6g (ENSPEMG00000030931) #32	Tspan10 (ENSPEMG00000013391) #33	ENSPEMG00000027189	Nploc4 (ENSPEMG00000018717) #34	Faap100 (ENSPEMG00000017629)	Fscn2 (ENSPEMG00000028380) #35
Prairie vole	MODERN SPECIES	15	Dcxr (ENSMOCG00000016163) #7	Rac3 (ENSMOCG00000018143) #8	Lrrc45 (ENSMOCG00000019477) #9	ENSMOCG00000022273 #10	Aspscr1 (ENSMOCG00000020542) #11	Notum (ENSMOCG00000022099) #12	Myadml2 (ENSMOCG00000002991) #13	Pycr1 (ENSMOCG00000019166) #14	Mafg (ENSMOCG00000020602) #15	Sirt7 (ENSMOCG00000019340) #16	Pcyt2 (ENSMOCG00000016007) #17	Npb (ENSMOCG00000019206) #18	ENSMOCG00000016444 #19	ENSMOCG00000016792 #20	Arhgdia (ENSMOCG00000016860) #21	P4hb (ENSMOCG00000016072) #22	Ppp1r27 (ENSMOCG00000015295) #23	Mcrip1 (ENSMOCG00000016260) #24	Gcgr (ENSMOCG00000021695) #25	Slc25a10 (ENSMOCG00000018423) #26	Mrpl12 (ENSMOCG00000019919) #27	Hgs (ENSMOCG00000018462) #28	Arl16 (ENSMOCG00000019090) #29	Ccdc137 (ENSMOCG00000017204) #30	Oxld1 (ENSMOCG00000015599) #31	Pde6g (ENSMOCG00000020679) #32	Tspan10 (ENSMOCG00000021367) #33	Nploc4 (ENSMOCG00000017904) #34	Faap100 (ENSMOCG00000020709)	Fscn2 (ENSMOCG00000018078) #35	Actg1 (ENSMOCG00000014482)
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
Mus	ANCESTRAL SPECIES	2	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00960000191026	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615.h.a #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00960000191026	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615.h.a #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
Mus_C	ANCESTRAL SPECIES	21	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00960000191026	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615.h.a #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b.eb
spretus	MODERN SPECIES	2	Dcxr (MGP_SPRETEiJ_G0018386) #7	Rac3 (MGP_SPRETEiJ_G0018385) #8	Lrrc45 (MGP_SPRETEiJ_G0018384) #9	Cenpx (MGP_SPRETEiJ_G0018383)	Aspscr1 (MGP_SPRETEiJ_G0018382) #11	Notum (MGP_SPRETEiJ_G0018381) #12	MGP_SPRETEiJ_G0018380 #13	Pycr1 (MGP_SPRETEiJ_G0018379) #14	Mafg (MGP_SPRETEiJ_G0018378) #15	Sirt7 (MGP_SPRETEiJ_G0018377) #16	Pcyt2 (MGP_SPRETEiJ_G0018376) #17	Npb (MGP_SPRETEiJ_G0018375) #18	Anapc11 (MGP_SPRETEiJ_G0018374) #19	Alyref (MGP_SPRETEiJ_G0018373) #20	Arhgdia (MGP_SPRETEiJ_G0018372) #21	P4hb (MGP_SPRETEiJ_G0018371) #22	Ppp1r27 (MGP_SPRETEiJ_G0018370) #23	Mcrip1 (MGP_SPRETEiJ_G0018369) #24	Gcgr (MGP_SPRETEiJ_G0018368) #25	Slc25a10 (MGP_SPRETEiJ_G0018367) #26	Mrpl12 (MGP_SPRETEiJ_G0018366) #27	Hgs (MGP_SPRETEiJ_G0018365) #28	Arl16 (MGP_SPRETEiJ_G0018364) #29	Ccdc137 (MGP_SPRETEiJ_G0018363) #30	Oxld1 (MGP_SPRETEiJ_G0018362) #31	Pde6g (MGP_SPRETEiJ_G0018361) #32	Tspan10 (MGP_SPRETEiJ_G0018360) #33	Nploc4 (MGP_SPRETEiJ_G0018359) #34	Faap100 (MGP_SPRETEiJ_G0018358)	Fscn2 (MGP_SPRETEiJ_G0018357) #35	MGP_SPRETEiJ_G0018356
Steppe mouse	MODERN SPECIES	3195																P4hb (ENSMSIG00000014074) #22	Ppp1r27 (ENSMSIG00000014115) #23	ENSMSIG00000014124 #24	Gcgr (ENSMSIG00000014132) #25	Slc25a10 (ENSMSIG00000014201) #26	Mrpl12 (ENSMSIG00000014251) #27	Hgs (ENSMSIG00000014278) #28	Arl16 (ENSMSIG00000014355) #29	ENSMSIG00000014376 #30	Oxld1 (ENSMSIG00000014392) #31	Pde6g (ENSMSIG00000014399) #32	Tspan10 (ENSMSIG00000014412) #33	Nploc4 (ENSMSIG00000014422) #34	Faap100 (ENSMSIG00000014480)	Fscn2 (ENSMSIG00000014526) #35	ENSMSIG00000014544
Mouse	MODERN SPECIES	2	Dcxr (ENSMUSG00000039450) #7	Rac3 (ENSMUSG00000018012) #8	Lrrc45 (ENSMUSG00000025145) #9	Cenpx (ENSMUSG00000025144)	Aspscr1 (ENSMUSG00000025142) #11	Notum (ENSMUSG00000042988) #12	Myadml2 (ENSMUSG00000025141) #13	Pycr1 (ENSMUSG00000025140) #14	Mafg (ENSMUSG00000051510) #15	Sirt7 (ENSMUSG00000025138) #16	Pcyt2 (ENSMUSG00000025137) #17	Npb (ENSMUSG00000044034) #18	Anapc11 (ENSMUSG00000025135) #19	Alyref (ENSMUSG00000025134) #20	Arhgdia (ENSMUSG00000025132) #21	P4hb (ENSMUSG00000025130) #22	Ppp1r27 (ENSMUSG00000025129) #23	Mcrip1 (ENSMUSG00000061111) #24	Gcgr (ENSMUSG00000025127) #25	Slc25a10 (ENSMUSG00000025792) #26	Mrpl12 (ENSMUSG00000039640) #27	Hgs (ENSMUSG00000025793) #28	Arl16 (ENSMUSG00000057594) #29	Ccdc137 (ENSMUSG00000049957) #30	Oxld1 (ENSMUSG00000039670) #31	Pde6g (ENSMUSG00000025386) #32	Tspan10 (ENSMUSG00000039691) #33	Nploc4 (ENSMUSG00000039703) #34	Faap100 (ENSMUSG00000025384)	Fscn2 (ENSMUSG00000025380) #35	Actg1 (ENSMUSG00000062825)
Ryukyu mouse	MODERN SPECIES	2	Dcxr (MGP_CAROLIEiJ_G0017542) #7	Rac3 (MGP_CAROLIEiJ_G0017541) #8	Lrrc45 (MGP_CAROLIEiJ_G0017540) #9	Cenpx (MGP_CAROLIEiJ_G0017539)	Aspscr1 (MGP_CAROLIEiJ_G0017538) #11	Notum (MGP_CAROLIEiJ_G0017537) #12	MGP_CAROLIEiJ_G0017536 #13	Pycr1 (MGP_CAROLIEiJ_G0017535) #14	Mafg (MGP_CAROLIEiJ_G0017534) #15	Sirt7 (MGP_CAROLIEiJ_G0017533) #16	MGP_CAROLIEiJ_G0017532 #17	Npb (MGP_CAROLIEiJ_G0017531) #18	Anapc11 (MGP_CAROLIEiJ_G0017530) #19	Alyref (MGP_CAROLIEiJ_G0017529) #20	Arhgdia (MGP_CAROLIEiJ_G0017528) #21	P4hb (MGP_CAROLIEiJ_G0017527) #22	Ppp1r27 (MGP_CAROLIEiJ_G0017526) #23	Mcrip1 (MGP_CAROLIEiJ_G0017525) #24	Gcgr (MGP_CAROLIEiJ_G0017524) #25	Slc25a10 (MGP_CAROLIEiJ_G0017523) #26	Mrpl12 (MGP_CAROLIEiJ_G0017522) #27	Hgs (MGP_CAROLIEiJ_G0017521) #28	Arl16 (MGP_CAROLIEiJ_G0017520) #29	Ccdc137 (MGP_CAROLIEiJ_G0017519) #30	Oxld1 (MGP_CAROLIEiJ_G0017518) #31	Pde6g (MGP_CAROLIEiJ_G0017517) #32	Tspan10 (MGP_CAROLIEiJ_G0017516) #33	Nploc4 (MGP_CAROLIEiJ_G0017515) #34	Faap100 (MGP_CAROLIEiJ_G0017514)	Fscn2 (MGP_CAROLIEiJ_G0017513) #35	MGP_CAROLIEiJ_G0017512
Shrew mouse	MODERN SPECIES	5	Rac3 (MGP_PahariEiJ_G0018668) #8	Lrrc45 (MGP_PahariEiJ_G0018667) #9	MGP_PahariEiJ_G0018666 #10	Aspscr1 (MGP_PahariEiJ_G0018665) #11	Notum (MGP_PahariEiJ_G0018664) #12	MGP_PahariEiJ_G0018663 #13	Pycr1 (MGP_PahariEiJ_G0018662) #14	Mafg (MGP_PahariEiJ_G0018661) #15	Sirt7 (MGP_PahariEiJ_G0018660) #16	Pcyt2 (MGP_PahariEiJ_G0018659) #17	Npb (MGP_PahariEiJ_G0018658) #18	Anapc11 (MGP_PahariEiJ_G0018657) #19	MGP_PahariEiJ_G0018656 #20	MGP_PahariEiJ_G0018655 #20	Arhgdia (MGP_PahariEiJ_G0018654) #21	P4hb (MGP_PahariEiJ_G0018653) #22	Ppp1r27 (MGP_PahariEiJ_G0018652) #23	Mcrip1 (MGP_PahariEiJ_G0018651) #24	Gcgr (MGP_PahariEiJ_G0018650) #25	Slc25a10 (MGP_PahariEiJ_G0018649) #26	Mrpl12 (MGP_PahariEiJ_G0018648) #27	Hgs (MGP_PahariEiJ_G0018647) #28	Arl16 (MGP_PahariEiJ_G0018646) #29	Ccdc137 (MGP_PahariEiJ_G0018645) #30	Oxld1 (MGP_PahariEiJ_G0018644) #31	Pde6g (MGP_PahariEiJ_G0018643) #32	Tspan10 (MGP_PahariEiJ_G0018642) #33	Nploc4 (MGP_PahariEiJ_G0018641) #34	Faap100 (MGP_PahariEiJ_G0018640)	Fscn2 (MGP_PahariEiJ_G0018639) #35	MGP_PahariEiJ_G0018638
Rat	MODERN SPECIES	1	Rfng (ENSRNOG00000050298)	LOC688321 (ENSRNOG00000067169) ##7	Rac3 (ENSRNOG00000069600) #8	Lrrc45 (ENSRNOG00000045926) #9	Cbr2 (ENSRNOG00000069492) ##7	Aspscr1 (ENSRNOG00000036678) #11	Notum (ENSRNOG00000036680) #12	Myadml2 (ENSRNOG00000036681) #13	Pycr1 (ENSRNOG00000036682) #14	Mafg (ENSRNOG00000036697) #15	Sirt7 (ENSRNOG00000036683) #16	Pcyt2 (ENSRNOG00000036684) #17	Npb (ENSRNOG00000036686) #18	Alyref (ENSRNOG00000036687) #20	Arhgdia (ENSRNOG00000036688) #21	P4hb (ENSRNOG00000036689) #22	Ppp1r27 (ENSRNOG00000036690) #23	Mcrip1 (ENSRNOG00000036691) #24	Gcgr (ENSRNOG00000036692) #25	Slc25a10 (ENSRNOG00000036693) #26	Mrpl12 (ENSRNOG00000036695) #27	Hgs (ENSRNOG00000036696) #28	Arl16 (ENSRNOG00000049235) #29	Ccdc137 (ENSRNOG00000048712) #30	Oxld1 (ENSRNOG00000047517) #31	Pde6g (ENSRNOG00000069361) #32	Tspan10 (ENSRNOG00000046076) #33	Nploc4 (ENSRNOG00000036698) #34	Faap100 (ENSRNOG00000036699)	Fscn2 (ENSRNOG00000036700) #35	Actg1 (ENSRNOG00000036701)
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	392	Dcxr (ENSNGAG00000022267) #7	Rac3 (ENSNGAG00000024158) #8	Lrrc45 (ENSNGAG00000014866) #9	ENSNGAG00000000855 #10	Aspscr1 (ENSNGAG00000011937) #11	Notum (ENSNGAG00000010728) #12	Myadml2 (ENSNGAG00000011652) #13	Pycr1 (ENSNGAG00000013973) #14	Mafg (ENSNGAG00000007487) #15	Sirt7 (ENSNGAG00000021943) #16	Pcyt2 (ENSNGAG00000024272) #17	Npb (ENSNGAG00000021991) #18	Anapc11 (ENSNGAG00000006910) #19	ENSNGAG00000022014	Arhgdia (ENSNGAG00000001460) #21	ENSNGAG00000022248 #22	Ppp1r27 (ENSNGAG00000024333) #23	Mcrip1 (ENSNGAG00000009636) #24	Gcgr (ENSNGAG00000022508) #25	Slc25a10 (ENSNGAG00000024310) #26	Mrpl12 (ENSNGAG00000010189) #27	Hgs (ENSNGAG00000018310) #28	Arl16 (ENSNGAG00000010707) #29	Ccdc137 (ENSNGAG00000021904) #30	ENSNGAG00000022974 #31	Pde6g (ENSNGAG00000024140) #32	Tspan10 (ENSNGAG00000010462) #33	Nploc4 (ENSNGAG00000013406) #34	Faap100 (ENSNGAG00000016742)	ENSNGAG00000012084	Bahcc1 (ENSNGAG00000014344) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	752																ENSNGAG00000010929 #22	ENSNGAG00000013881	Zfp385b (ENSNGAG00000010574)
Lesser Egyptian jerboa	MODERN SPECIES	56	Dcxr (ENSJJAG00000002613) #7	Rac3 (ENSJJAG00000012538) #8	Lrrc45 (ENSJJAG00000003995) #9	ENSJJAG00000005559 #10	Aspscr1 (ENSJJAG00000019747) #11	Notum (ENSJJAG00000003259) #12	Myadml2 (ENSJJAG00000005042) #13	Pycr1 (ENSJJAG00000009901) #14	Mafg (ENSJJAG00000009755) #15	Sirt7 (ENSJJAG00000017749) #16	Pcyt2 (ENSJJAG00000012939) #17	Npb (ENSJJAG00000011500) #18	Anapc11 (ENSJJAG00000012099) #19	ENSJJAG00000004134 #20	Arhgdia (ENSJJAG00000014353) #21	P4hb (ENSJJAG00000013521) #22	Ppp1r27 (ENSJJAG00000018812) #23	Mcrip1 (ENSJJAG00000009530) #24	Gcgr (ENSJJAG00000008266) #25	Arl4d (ENSJJAG00000004698)	ENSJJAG00000015131	ENSJJAG00000011475	Icam2 (ENSJJAG00000015739)	ENSJJAG00000013757	Scn4a (ENSJJAG00000012708)	Cd79b (ENSJJAG00000007040)	Gh (ENSJJAG00000009689)	Tcam1 (ENSJJAG00000009667)	Smarcd2 (ENSJJAG00000010905)	Psmc5 (ENSJJAG00000015828)	Ftsj3 (ENSJJAG00000012822)
Kangaroo rat	MODERN SPECIES	482	Cbr2 (ENSDORG00000023476) ##7	Dcxr (ENSDORG00000013523) #7	Rac3 (ENSDORG00000013521) #8	Lrrc45 (ENSDORG00000013520) #9	ENSDORG00000024180 #10	ENSDORG00000026135 #11	Notum (ENSDORG00000000307) #12	Myadml2 (ENSDORG00000000306) #13	Pycr1 (ENSDORG00000000301) #14	Mafg (ENSDORG00000025339) #15	ENSDORG00000000295 #16	Pcyt2 (ENSDORG00000000291) #17	Anapc11 (ENSDORG00000024235) #19	ENSDORG00000025849 #20	Arhgdia (ENSDORG00000028839) #21	P4hb (ENSDORG00000011795) #22	Ppp1r27 (ENSDORG00000011794) #23	Mcrip1 (ENSDORG00000026667) #24	Gcgr (ENSDORG00000012245) #25	Slc25a10 (ENSDORG00000008076) #26	Mrpl12 (ENSDORG00000008074) #27	Hgs (ENSDORG00000008072) #28	Arl16 (ENSDORG00000008069) #29	Ccdc137 (ENSDORG00000008068) #30	ENSDORG00000008066 #31	Pde6g (ENSDORG00000023297) #32	Tspan10 (ENSDORG00000008064) #33	Nploc4 (ENSDORG00000010288) #34	ENSDORG00000024388	Fscn2 (ENSDORG00000010286) #35	ENSDORG00000028801
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157351 #22
Hedgehog	MODERN SPECIES	1638																ENSEEUG00000002356 #22	ENSEEUG00000002349
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00940000159369
Suina	ANCESTRAL SPECIES		ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Chacoan peccary	MODERN SPECIES	825	RAC3 (ENSCWAG00000020090) #8	LRRC45 (ENSCWAG00000020100) #9	CENPX (ENSCWAG00000020139) #10	ASPSCR1 (ENSCWAG00000020153) #11	NOTUM (ENSCWAG00000020178) #12	MYADML2 (ENSCWAG00000020202) #13	PYCR1 (ENSCWAG00000020220) #14	MAFG (ENSCWAG00000020274) #15	ENSCWAG00000020280	SIRT7 (ENSCWAG00000020288) #16	PCYT2 (ENSCWAG00000020344) #17	NPB (ENSCWAG00000020435) #18	ANAPC11 (ENSCWAG00000020447) #19	ALYREF (ENSCWAG00000020454) #20	ARHGDIA (ENSCWAG00000020475) #21	P4HB (ENSCWAG00000008116) #22	PPP1R27 (ENSCWAG00000008184) #23	ENSCWAG00000008267 #24	GCGR (ENSCWAG00000008471) #25
Pig	MODERN SPECIES	3	DCXR (ENSSSCG00000039873) #7	RAC3 (ENSSSCG00000036973) #8	LRRC45 (ENSSSCG00000040503) #9	ENSSSCG00000049515 #10	ASPSCR1 (ENSSSCG00000040727) #11	NOTUM (ENSSSCG00000039013) #12	MYADML2 (ENSSSCG00000032974) #13	PYCR1 (ENSSSCG00000034723) #14	MAFG (ENSSSCG00000035253) #15	SIRT7 (ENSSSCG00000034695) #16	PCYT2 (ENSSSCG00000039650) #17	ALYREF (ENSSSCG00000032655) #20	NPB (ENSSSCG00000035837) #18	ENSSSCG00000035728 #19	ARHGDIA (ENSSSCG00000034058) #21	P4HB (ENSSSCG00000039148) #22	PPP1R27 (ENSSSCG00000037039) #23	MCRIP1 (ENSSSCG00000039424) #24	GCGR (ENSSSCG00000034891) #25	SLC25A10 (ENSSSCG00000033620) #26	MRPL12 (ENSSSCG00000033148) #27	HGS (ENSSSCG00000033082) #28	ARL16 (ENSSSCG00000053661) #29	CCDC137 (ENSSSCG00000034716) #30	OXLD1 (ENSSSCG00000033788) #31	PDE6G (ENSSSCG00000053315) #32	TSPAN10 (ENSSSCG00000031531) #33	NPLOC4 (ENSSSCG00000024235) #34	FAAP100 (ENSSSCG00000029616)	FSCN2 (ENSSSCG00000052003) #35	ACTG1 (ENSSSCG00000028355)
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00940000159369
Camelidae	ANCESTRAL SPECIES	38	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000156783 #26	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00940000159369	ENSGT00520000061927.e	ENSGT00390000015076
Arabian camel	MODERN SPECIES	7	DCXR (ENSCDRG00005008260) #7	RAC3 (ENSCDRG00005008327) #8	LRRC45 (ENSCDRG00005008391) #9	ENSCDRG00005008515 #10	ASPSCR1 (ENSCDRG00005008547) #11	NOTUM (ENSCDRG00005008627) #12	MYADML2 (ENSCDRG00005008730) #13	PYCR1 (ENSCDRG00005008751) #14	MAFG (ENSCDRG00005008797) #15	SIRT7 (ENSCDRG00005008861) #16	PCYT2 (ENSCDRG00005009142) #17	NPB (ENSCDRG00005009222) #18	ENSCDRG00005009255 #19	ALYREF (ENSCDRG00005009314) #20	ARHGDIA (ENSCDRG00005009353) #21	P4HB (ENSCDRG00005009507) #22	PPP1R27 (ENSCDRG00005009610) #23	ENSCDRG00005009683 #24	SLC25A10 (ENSCDRG00005010073) #26	HGS (ENSCDRG00005010271) #28	ARL16 (ENSCDRG00005010614) #29	CCDC137 (ENSCDRG00005010705) #30	OXLD1 (ENSCDRG00005010768) #31	PDE6G (ENSCDRG00005010800) #32	TSPAN10 (ENSCDRG00005010826) #33	NPLOC4 (ENSCDRG00005010972) #34	FAAP100 (ENSCDRG00005011118)	FSCN2 (ENSCDRG00005011234) #35	SLC38A10 (ENSCDRG00005012346)	NDUFAF8 (ENSCDRG00005012491)	TEPSIN (ENSCDRG00005012558)
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Cetacea	ANCESTRAL SPECIES	5	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327.a #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Odontoceti	ANCESTRAL SPECIES	16	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327.a #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Odontoceti_a	ANCESTRAL SPECIES	14	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327.a #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Odontoceti_b	ANCESTRAL SPECIES	16	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186.j #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000154268.e.a.w.b	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327.a #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35
Monodontidae	ANCESTRAL SPECIES	16	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186.i.b #19	ENSGT00950000184814	ENSGT00550000075186.j #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000154268.e.a.w.b	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327.a #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35
Narwhal	MODERN SPECIES	316	ENSMMNG00015018606 ##7	DCXR (ENSMMNG00015018638) #7	RAC3 (ENSMMNG00015018661) #8	LRRC45 (ENSMMNG00015018685) #9	CENPX (ENSMMNG00015018739) #10	ASPSCR1 (ENSMMNG00015018793) #11	NOTUM (ENSMMNG00015018857) #12	PYCR1 (ENSMMNG00015018894) #14	MAFG (ENSMMNG00015018924) #15	SIRT7 (ENSMMNG00015018944) #16	PCYT2 (ENSMMNG00015019018) #17	NPB (ENSMMNG00015019234) #18	ENSMMNG00015019254 #19	ALYREF (ENSMMNG00015019283) #20	ARHGDIA (ENSMMNG00015019312) #21	P4HB (ENSMMNG00015019364) #22	PPP1R27 (ENSMMNG00015019423) #23	ENSMMNG00015019450 #24	GCGR (ENSMMNG00015019507) #25	ENSMMNG00015019554	SLC25A10 (ENSMMNG00015019574) #26	MRPL12 (ENSMMNG00015019602) #27	HGS (ENSMMNG00015019629) #28	ENSMMNG00015019647 #29	CCDC137 (ENSMMNG00015019664) #30	ENSMMNG00015019695 #31	PDE6G (ENSMMNG00015019707) #32	ENSMMNG00015019722 #33	NPLOC4 (ENSMMNG00015019752) #34	FAAP100 (ENSMMNG00015019858)	FSCN2 (ENSMMNG00015019897) #35
Beluga whale	MODERN SPECIES	26	CENPX (ENSDLEG00000003186) #10	ASPSCR1 (ENSDLEG00000003199) #11	NOTUM (ENSDLEG00000003212) #12	MYADML2 (ENSDLEG00000003227) #13	PYCR1 (ENSDLEG00000003233) #14	MAFG (ENSDLEG00000003244) #15	SIRT7 (ENSDLEG00000003254) #16	PCYT2 (ENSDLEG00000003270) #17	ENSDLEG00000003287 #18	ENSDLEG00000003289	ENSDLEG00000003295 #18	ANAPC11 (ENSDLEG00000003304) #19	ENSDLEG00000003312	ALYREF (ENSDLEG00000003322) #20	ARHGDIA (ENSDLEG00000003332) #21	P4HB (ENSDLEG00000003338) #22	PPP1R27 (ENSDLEG00000003347) #23	ENSDLEG00000003358 #24	GCGR (ENSDLEG00000003371) #25	ENSDLEG00000003375	SLC25A10 (ENSDLEG00000003389) #26	MRPL12 (ENSDLEG00000003392) #27	HGS (ENSDLEG00000003399) #28	ARL16 (ENSDLEG00000003423) #29	CCDC137 (ENSDLEG00000003427) #30	ENSDLEG00000003430 #31	PDE6G (ENSDLEG00000003433) #32	TSPAN10 (ENSDLEG00000003436) #33	NPLOC4 (ENSDLEG00000003440) #34	FAAP100 (ENSDLEG00000003454)	FSCN2 (ENSDLEG00000003461) #35
Vaquita	MODERN SPECIES	12	DCXR (ENSPSNG00000021569) #7	RAC3 (ENSPSNG00000021585) #8	LRRC45 (ENSPSNG00000021598) #9	CENPX (ENSPSNG00000021627) #10	ASPSCR1 (ENSPSNG00000021675) #11	NOTUM (ENSPSNG00000021747) #12	MYADML2 (ENSPSNG00000021769) #13	PYCR1 (ENSPSNG00000021790) #14	MAFG (ENSPSNG00000021813) #15	SIRT7 (ENSPSNG00000013257) #16	PCYT2 (ENSPSNG00000013326) #17	ENSPSNG00000013701 #19	ENSPSNG00000013766	ALYREF (ENSPSNG00000013832) #20	ARHGDIA (ENSPSNG00000013962) #21	P4HB (ENSPSNG00000014031) #22	PPP1R27 (ENSPSNG00000014100) #23	MCRIP1 (ENSPSNG00000014195) #24	GCGR (ENSPSNG00000014383) #25	ENSPSNG00000014572	SLC25A10 (ENSPSNG00000014601) #26	MRPL12 (ENSPSNG00000014673) #27	HGS (ENSPSNG00000014734) #28	ENSPSNG00000014786 #29	CCDC137 (ENSPSNG00000014847) #30	OXLD1 (ENSPSNG00000014909) #31	PDE6G (ENSPSNG00000014939) #32	TSPAN10 (ENSPSNG00000015042) #33	NPLOC4 (ENSPSNG00000015436) #34	FAAP100 (ENSPSNG00000015599)	FSCN2 (ENSPSNG00000015630) #35
Dolphin	MODERN SPECIES	2917							NOTUM (ENSTTRG00000012283) #12	MYADML2 (ENSTTRG00000012282) #13	PYCR1 (ENSTTRG00000012281) #14	MAFG (ENSTTRG00000012280) #15	SIRT7 (ENSTTRG00000012279) #16	PCYT2 (ENSTTRG00000012278) #17	ENSTTRG00000012276	ALYREF (ENSTTRG00000012275) #20	ARHGDIA (ENSTTRG00000012274) #21	P4HB (ENSTTRG00000012273) #22	PPP1R27 (ENSTTRG00000012272) #23
Sperm whale	MODERN SPECIES	48							MYADML2 (ENSPCTG00005021611) #13	PYCR1 (ENSPCTG00005021615) #14	MAFG (ENSPCTG00005021630) #15	SIRT7 (ENSPCTG00005021650) #16	PCYT2 (ENSPCTG00005021680) #17	NPB (ENSPCTG00005021754) #18	ANAPC11 (ENSPCTG00005021767) #19	ALYREF (ENSPCTG00005021783) #20	ARHGDIA (ENSPCTG00005021801) #21	P4HB (ENSPCTG00005021823) #22	PPP1R27 (ENSPCTG00005021837) #23	MCRIP1 (ENSPCTG00005021849) #24	GCGR (ENSPCTG00005021868) #25	SLC25A10 (ENSPCTG00005021888) #26	MRPL12 (ENSPCTG00005021898) #27	HGS (ENSPCTG00005021913) #28	ARL16 (ENSPCTG00005021950) #29
Blue whale	MODERN SPECIES	12	DCXR (ENSBMSG00010018198) #7	RAC3 (ENSBMSG00010018126) #8	LRRC45 (ENSBMSG00010018014) #9	CENPX (ENSBMSG00010017952) #10	ASPSCR1 (ENSBMSG00010017867) #11	NOTUM (ENSBMSG00010017763) #12	MYADML2 (ENSBMSG00010017733) #13	PYCR1 (ENSBMSG00010017673) #14	MAFG (ENSBMSG00010017612) #15	SIRT7 (ENSBMSG00010017558) #16	PCYT2 (ENSBMSG00010017387) #17	NPB (ENSBMSG00010017304) #18	ANAPC11 (ENSBMSG00010017282) #19	ALYREF (ENSBMSG00010017240) #20	ARHGDIA (ENSBMSG00010017205) #21	P4HB (ENSBMSG00010017152) #22	PPP1R27 (ENSBMSG00010017128) #23	ENSBMSG00010017059 #24	GCGR (ENSBMSG00010016997) #25	SLC25A10 (ENSBMSG00010016936) #26	MRPL12 (ENSBMSG00010016896) #27	HGS (ENSBMSG00010016791) #28	ARL16 (ENSBMSG00010016743) #29	CCDC137 (ENSBMSG00010016685) #30	ENSBMSG00010016649 #31	PDE6G (ENSBMSG00010016623) #32	TSPAN10 (ENSBMSG00010016370) #33	NPLOC4 (ENSBMSG00010016260) #34	FAAP100 (ENSBMSG00010016216)	FSCN2 (ENSBMSG00010016184) #35	ACTG1 (ENSBMSG00010016154)
Pecora	ANCESTRAL SPECIES	1	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Yarkand deer	MODERN SPECIES	28	ENSCHYG00000022835 ##7	DCXR (ENSCHYG00000022885) #7	RAC3 (ENSCHYG00000022963) #8	LRRC45 (ENSCHYG00000023019) #9	ENSCHYG00000023208	ASPSCR1 (ENSCHYG00000023260) #11	NOTUM (ENSCHYG00000023320) #12	MYADML2 (ENSCHYG00000023365) #13	PYCR1 (ENSCHYG00000023387) #14	MAFG (ENSCHYG00000023489) #15	SIRT7 (ENSCHYG00000023516) #16	PCYT2 (ENSCHYG00000023621) #17	ENSCHYG00000024022	ANAPC11 (ENSCHYG00000024045) #19	ENSCHYG00000024063 #21	P4HB (ENSCHYG00000024081) #22	PPP1R27 (ENSCHYG00000024219) #23	MCRIP1 (ENSCHYG00000024250) #24	GCGR (ENSCHYG00000024352) #25	SLC25A10 (ENSCHYG00000024415) #26	MRPL12 (ENSCHYG00000024470) #27	HGS (ENSCHYG00000024504) #28	ARL16 (ENSCHYG00000024567) #29	CCDC137 (ENSCHYG00000024590) #30	OXLD1 (ENSCHYG00000005913) #31	ENSCHYG00000005931 #32	TSPAN10 (ENSCHYG00000006021) #33	ENSCHYG00000006202	NPLOC4 (ENSCHYG00000006240) #34	ENSCHYG00000006321	FAAP100 (ENSCHYG00000006343)
Percora_a	ANCESTRAL SPECIES	2	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Siberian musk deer	MODERN SPECIES	1210	RAC3 (ENSMMSG00000023291) #8	LRRC45 (ENSMMSG00000023309) #9	CENPX (ENSMMSG00000023328) #10	ASPSCR1 (ENSMMSG00000023339) #11	NOTUM (ENSMMSG00000023359) #12	MYADML2 (ENSMMSG00000023365) #13	ENSMMSG00000023373 #14	MAFG (ENSMMSG00000023377) #15	SIRT7 (ENSMMSG00000023387) #16	PCYT2 (ENSMMSG00000023411) #17	NPB (ENSMMSG00000023444) #18	ANAPC11 (ENSMMSG00000023453) #19	ALYREF (ENSMMSG00000023460) #20	ARHGDIA (ENSMMSG00000023467) #21	ENSMMSG00000023472	P4HB (ENSMMSG00000023476) #22	PPP1R27 (ENSMMSG00000023485) #23	MCRIP1 (ENSMMSG00000023490) #24	GCGR (ENSMMSG00000023503) #25	SLC25A10 (ENSMMSG00000023511) #26	MRPL12 (ENSMMSG00000023519) #27	HGS (ENSMMSG00000023527) #28	ARL16 (ENSMMSG00000023540) #29	CCDC137 (ENSMMSG00000023544) #30	OXLD1 (ENSMMSG00000023555) #31	PDE6G (ENSMMSG00000023559) #32	TSPAN10 (ENSMMSG00000023568) #33	NPLOC4 (ENSMMSG00000023588) #34	FAAP100 (ENSMMSG00000023613)	FSCN2 (ENSMMSG00000023620) #35	ACTG1 (ENSMMSG00000023630)
Bovidae	ANCESTRAL SPECIES	2	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Caprinae	ANCESTRAL SPECIES	1	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00940000170700	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Goat	MODERN SPECIES	10	ENSCHIG00000023379 ##7	DCXR (ENSCHIG00000026975) #7	RAC3 (ENSCHIG00000021241) #8	LRRC45 (ENSCHIG00000024091) #9	ASPSCR1 (ENSCHIG00000022678) #11	NOTUM (ENSCHIG00000017267) #12	MYADML2 (ENSCHIG00000011879) #13	PYCR1 (ENSCHIG00000026809) #14	MAFG (ENSCHIG00000015647) #15	SIRT7 (ENSCHIG00000016745) #16	PCYT2 (ENSCHIG00000007479) #17	NPB (ENSCHIG00000021218) #18	ANAPC11 (ENSCHIG00000013891) #19	ALYREF (ENSCHIG00000017396) #20	ARHGDIA (ENSCHIG00000021653) #21	P4HB (ENSCHIG00000026541) #22	PPP1R27 (ENSCHIG00000013059) #23	MCRIP1 (ENSCHIG00000026672) #24	GCGR (ENSCHIG00000011335) #25	SLC25A10 (ENSCHIG00000014615) #26	MRPL12 (ENSCHIG00000027210) #27	HGS (ENSCHIG00000025208) #28	ARL16 (ENSCHIG00000017946) #29	CCDC137 (ENSCHIG00000011693) #30	OXLD1 (ENSCHIG00000016238) #31	TSPAN10 (ENSCHIG00000026861) #33	PDE6G (ENSCHIG00000016232) #32	NPLOC4 (ENSCHIG00000008794) #34	FAAP100 (ENSCHIG00000019046)	FSCN2 (ENSCHIG00000010058) #35	ACTG1 (ENSCHIG00000026676)
Rambouillet Sheep	MODERN SPECIES	2	ENSOARG00020025476 #7	RAC3 (ENSOARG00020025472) #8	LRRC45 (ENSOARG00020025451) #9	ENSOARG00020025443	ASPSCR1 (ENSOARG00020025424) #11	NOTUM (ENSOARG00020025412) #12	MYADML2 (ENSOARG00020025407) #13	PYCR1 (ENSOARG00020025392) #14	MAFG (ENSOARG00020025383) #15	SIRT7 (ENSOARG00020025373) #16	PCYT2 (ENSOARG00020025311) #17	NPB (ENSOARG00020025289) #18	ANAPC11 (ENSOARG00020025279) #19	ALYREF (ENSOARG00020025263) #20	ARHGDIA (ENSOARG00020025245) #21	P4HB (ENSOARG00020025236) #22	PPP1R27 (ENSOARG00020025219) #23	MCRIP1 (ENSOARG00020025199) #24	GCGR (ENSOARG00020025179) #25	SLC25A10 (ENSOARG00020025141) #26	MRPL12 (ENSOARG00020025126) #27	HGS (ENSOARG00020025119) #28	ARL16 (ENSOARG00020025114) #29	CCDC137 (ENSOARG00020025104) #30	OXLD1 (ENSOARG00020025092) #31	PDE6G (ENSOARG00020025080) #32	TSPAN10 (ENSOARG00020025073) #33	NPLOC4 (ENSOARG00020025045) #34	FAAP100 (ENSOARG00020025026)	FSCN2 (ENSOARG00020025011) #35	ACTG1 (ENSOARG00020025000)
Bovinae	ANCESTRAL SPECIES		ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Bos	ANCESTRAL SPECIES	1	ENSGT00940000154873.g.a.d #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850.c.a #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Bos_a	ANCESTRAL SPECIES		ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00390000018868.B.a	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850.c.a #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Wild yak	MODERN SPECIES	1772	ENSBMUG00000026348 ##7	RAC3 (ENSBMUG00000026351) #8	LRRC45 (ENSBMUG00000026352) #9	CENPX (ENSBMUG00000026353) #10	ASPSCR1 (ENSBMUG00000026355) #11	NOTUM (ENSBMUG00000026356) #12	MYADML2 (ENSBMUG00000026357) #13	PYCR1 (ENSBMUG00000026360) #14	MAFG (ENSBMUG00000026361) #15	SIRT7 (ENSBMUG00000026362) #16	PCYT2 (ENSBMUG00000026369) #17	NPB (ENSBMUG00000026371) #18	ANAPC11 (ENSBMUG00000026374) #19	ENSBMUG00000026378	ARHGDIA (ENSBMUG00000026382) #21	P4HB (ENSBMUG00000026384) #22	PPP1R27 (ENSBMUG00000026385) #23	ENSBMUG00000026386 #24	GCGR (ENSBMUG00000026387) #25	SLC25A10 (ENSBMUG00000026389) #26	MRPL12 (ENSBMUG00000026391) #27	HGS (ENSBMUG00000026393) #28	ARL16 (ENSBMUG00000026396) #29	CCDC137 (ENSBMUG00000026398) #30	OXLD1 (ENSBMUG00000026400) #31	TSPAN10 (ENSBMUG00000026403) #33	PDE6G (ENSBMUG00000026404) #32	NPLOC4 (ENSBMUG00000026408) #34	FAAP100 (ENSBMUG00000026413)	FSCN2 (ENSBMUG00000026416) #35	ACTG1 (ENSBMUG00000026419)
Domestic yak	MODERN SPECIES	10	ENSBGRG00000004937 #7	ENSBGRG00000004878 #8	LRRC45 (ENSBGRG00000004499) #9	ENSBGRG00000004458	ASPSCR1 (ENSBGRG00000004411) #11	NOTUM (ENSBGRG00000004379) #12	MYADML2 (ENSBGRG00000004356) #13	PYCR1 (ENSBGRG00000004273) #14	ENSBGRG00000004242 #15	SIRT7 (ENSBGRG00000004185) #16	PCYT2 (ENSBGRG00000004030) #17	NPB (ENSBGRG00000004008) #18	ANAPC11 (ENSBGRG00000003986) #19	ALYREF (ENSBGRG00000003921) #20	ARHGDIA (ENSBGRG00000003861) #21	P4HB (ENSBGRG00000003814) #22	PPP1R27 (ENSBGRG00000025657) #23	ENSBGRG00000025624 #24	GCGR (ENSBGRG00000025609) #25	SLC25A10 (ENSBGRG00000025566) #26	MRPL12 (ENSBGRG00000025552) #27	HGS (ENSBGRG00000025508) #28	ARL16 (ENSBGRG00000025489) #29	CCDC137 (ENSBGRG00000025468) #30	OXLD1 (ENSBGRG00000025463) #31	ENSBGRG00000025444 #32	TSPAN10 (ENSBGRG00000025439) #33	NPLOC4 (ENSBGRG00000025394) #34	FAAP100 (ENSBGRG00000025378)	FSCN2 (ENSBGRG00000025362) #35	ACTG1 (ENSBGRG00000025349)
Bos_b	ANCESTRAL SPECIES	21	ENSGT00940000154873.g.a.d #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186.l #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850.c.a #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Cow	MODERN SPECIES	10	RAC3 (ENSBTAG00000022927) #8	DCXR (ENSBTAG00000008747) #7	LRRC45 (ENSBTAG00000004111) #9	CENPX (ENSBTAG00000004108) #10	ASPSCR1 (ENSBTAG00000004632) #11	NOTUM (ENSBTAG00000053558) #12	MYADML2 (ENSBTAG00000000044) #13	PYCR1 (ENSBTAG00000000042) #14	MAFG (ENSBTAG00000000040) #15	SIRT7 (ENSBTAG00000000039) #16	PCYT2 (ENSBTAG00000001868) #17	NPB (ENSBTAG00000013898) #18	ANAPC11 (ENSBTAG00000001937) #19	ALYREF (ENSBTAG00000008498) #20	ARHGDIA (ENSBTAG00000030209) #21	P4HB (ENSBTAG00000006045) #22	PPP1R27 (ENSBTAG00000024929) #23	MCRIP1 (ENSBTAG00000019812) #24	GCGR (ENSBTAG00000003786) #25	SLC25A10 (ENSBTAG00000055145) #26	MRPL12 (ENSBTAG00000000417) #27	HGS (ENSBTAG00000000411) #28	ARL16 (ENSBTAG00000053129) #29	CCDC137 (ENSBTAG00000000356) #30	OXLD1 (ENSBTAG00000000355) #31	PDE6G (ENSBTAG00000000354) #32	TSPAN10 (ENSBTAG00000040573) #33	NPLOC4 (ENSBTAG00000019105) #34	FAAP100 (ENSBTAG00000019104)	FSCN2 (ENSBTAG00000024932) #35	ACTG1 (ENSBTAG00000006189)
Hybrid Bos Indicus	MODERN SPECIES	10	DCXR (ENSBIXG00005015724) #7	RAC3 (ENSBIXG00005015712) #8	LRRC45 (ENSBIXG00005015698) #9	ENSBIXG00005015625	ASPSCR1 (ENSBIXG00005000232) #11	NOTUM (ENSBIXG00005015579) #12	MYADML2 (ENSBIXG00005002325) #13	PYCR1 (ENSBIXG00005015511) #14	MAFG (ENSBIXG00005015395) #15	SIRT7 (ENSBIXG00005015367) #16	PCYT2 (ENSBIXG00005015341) #17	NPB (ENSBIXG00005002236) #18	ENSBIXG00005006558 #19	ALYREF (ENSBIXG00005015130) #20	ARHGDIA (ENSBIXG00005015102) #21	P4HB (ENSBIXG00005002214) #22	PPP1R27 (ENSBIXG00005006926) #23	MCRIP1 (ENSBIXG00005015031) #24	GCGR (ENSBIXG00005014961) #25	SLC25A10 (ENSBIXG00005014928) #26	MRPL12 (ENSBIXG00005005498) #27	HGS (ENSBIXG00005007754) #28	ARL16 (ENSBIXG00005007457) #29	CCDC137 (ENSBIXG00005014820) #30	OXLD1 (ENSBIXG00005014805) #31	PDE6G (ENSBIXG00005014790) #32	TSPAN10 (ENSBIXG00005014757) #33	FAAP100 (ENSBIXG00005014736)	ENSBIXG00005014667 #34	FSCN2 (ENSBIXG00005014641) #35	ACTG1 (ENSBIXG00005014617)
American bison	MODERN SPECIES	3285	ENSBBBG00000015458 ##7	DCXR (ENSBBBG00000015467) #7	LRRC45 (ENSBBBG00000015526) #9	ENSBBBG00000003868	ENSBBBG00000015543	NOTUM (ENSBBBG00000007366) #12	MYADML2 (ENSBBBG00000015567) #13	PYCR1 (ENSBBBG00000015601) #14	MAFG (ENSBBBG00000003476) #15	SIRT7 (ENSBBBG00000003465) #16	PCYT2 (ENSBBBG00000003422) #17	NPB (ENSBBBG00000015625) #18	ANAPC11 (ENSBBBG00000015651) #19	ALYREF (ENSBBBG00000015659) #20	ARHGDIA (ENSBBBG00000015676) #21	P4HB (ENSBBBG00000015684) #22	PPP1R27 (ENSBBBG00000015692) #23	MCRIP1 (ENSBBBG00000015740) #24	GCGR (ENSBBBG00000015780) #25	SLC25A10 (ENSBBBG00000015815) #26	MRPL12 (ENSBBBG00000008550) #27	HGS (ENSBBBG00000015853) #28	ARL16 (ENSBBBG00000015867) #29	CCDC137 (ENSBBBG00000015881) #30	OXLD1 (ENSBBBG00000015885) #31	PDE6G (ENSBBBG00000000775) #32	TSPAN10 (ENSBBBG00000015968) #33	NPLOC4 (ENSBBBG00000016001) #34	FAAP100 (ENSBBBG00000016021)	FSCN2 (ENSBBBG00000016029) #35	ACTG1 (ENSBBBG00000016050)
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00910000148243	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Equus	ANCESTRAL SPECIES		ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Horse	MODERN SPECIES	2	DCXR (ENSECAG00000009805) #7	RAC3 (ENSECAG00000014115) #8	LRRC45 (ENSECAG00000018249) #9	CENPX (ENSECAG00000017882)	ASPSCR1 (ENSECAG00000011608) #11	NOTUM (ENSECAG00000020198) #12	ENSECAG00000030019	MYADML2 (ENSECAG00000057977) #13	PYCR1 (ENSECAG00000008836) #14	SIRT7 (ENSECAG00000019344) #16	PCYT2 (ENSECAG00000003512) #17	NPB (ENSECAG00000036597) #18	ENSECAG00000058528 #19	ALYREF (ENSECAG00000018754) #20	ARHGDIA (ENSECAG00000020501) #21	P4HB (ENSECAG00000009583) #22	PPP1R27 (ENSECAG00000008044) #23	MCRIP1 (ENSECAG00000008867) #24	GCGR (ENSECAG00000009806) #25	SLC25A10 (ENSECAG00000023250) #26	MRPL12 (ENSECAG00000044806) #27	HGS (ENSECAG00000010874) #28	ARL16 (ENSECAG00000026875) #29	CCDC137 (ENSECAG00000026974) #30	OXLD1 (ENSECAG00000011732) #31	PDE6G (ENSECAG00000011977) #32	TSPAN10 (ENSECAG00000011990) #33	NPLOC4 (ENSECAG00000012622) #34	ENSECAG00000060210	FAAP100 (ENSECAG00000002876)	FSCN2 (ENSECAG00000012565) #35
Donkey	MODERN SPECIES	4	DCXR (ENSEASG00005005877) #7	RAC3 (ENSEASG00005005875) #8	LRRC45 (ENSEASG00005005869) #9	CENPX (ENSEASG00005038514) #10	ASPSCR1 (ENSEASG00005005864) #11	NOTUM (ENSEASG00005005852) #12	MYADML2 (ENSEASG00005029638) #13	PYCR1 (ENSEASG00005005844) #14	MAFG (ENSEASG00005036610) #15	SIRT7 (ENSEASG00005005837) #16	PCYT2 (ENSEASG00005005833) #17	NPB (ENSEASG00005029058) #18	ENSEASG00005036237 #19	ENSEASG00005034234	ARHGDIA (ENSEASG00005037494) #21	P4HB (ENSEASG00005005814) #22	PPP1R27 (ENSEASG00005005812) #23	ENSEASG00005029020 #24	GCGR (ENSEASG00005005791) #25	SLC25A10 (ENSEASG00005005784) #26	MRPL12 (ENSEASG00005005780) #27	HGS (ENSEASG00005005773) #28	ARL16 (ENSEASG00005033082) #29	CCDC137 (ENSEASG00005033605) #30	OXLD1 (ENSEASG00005032509) #31	PDE6G (ENSEASG00005035748) #32	ENSEASG00005005762 #33	NPLOC4 (ENSEASG00005005741) #34	FAAP100 (ENSEASG00005005738)	FSCN2 (ENSEASG00005005735) #35	ACTG1 (ENSEASG00005005734)
Chiroptera	ANCESTRAL SPECIES	2	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00910000148243	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b	ENSGT00940000160116 #36
Megabat	MODERN SPECIES	7553								MYADML2 (ENSPVAG00000017877) #13	PYCR1 (ENSPVAG00000017874) #14	MAFG (ENSPVAG00000017873) #15	SIRT7 (ENSPVAG00000017872) #16	PCYT2 (ENSPVAG00000017868) #17	NPB (ENSPVAG00000017867) #18	ALYREF (ENSPVAG00000017866) #20	ARHGDIA (ENSPVAG00000017865) #21	P4HB (ENSPVAG00000017864) #22	PPP1R27 (ENSPVAG00000017863) #23
Microchiroptera	ANCESTRAL SPECIES		ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00910000148243	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b	ENSGT00940000160116 #36
Greater horseshoe bat	MODERN SPECIES	13	DCXR (ENSRFEG00010006515) #7	RAC3 (ENSRFEG00010006465) #8	LRRC45 (ENSRFEG00010006400) #9	ENSRFEG00010006356 #10	ASPSCR1 (ENSRFEG00010006266) #11	NOTUM (ENSRFEG00010006190) #12	MYADML2 (ENSRFEG00010006161) #13	PYCR1 (ENSRFEG00010006097) #14	ENSRFEG00010006039	MAFG (ENSRFEG00010006018) #15	ENSRFEG00010005761 #17	ENSRFEG00010005589 #18	ANAPC11 (ENSRFEG00010005574) #19	ALYREF (ENSRFEG00010005527) #20	ARHGDIA (ENSRFEG00010005502) #21	P4HB (ENSRFEG00010005441) #22	ENSRFEG00010021998 #23	MCRIP1 (ENSRFEG00010021995) #24	SLC25A10 (ENSRFEG00010021978) #26	MRPL12 (ENSRFEG00010021977) #27	HGS (ENSRFEG00010021971) #28	ARL16 (ENSRFEG00010021964) #29	CCDC137 (ENSRFEG00010021956) #30	ENSRFEG00010021949 #31	PDE6G (ENSRFEG00010021945) #32	TSPAN10 (ENSRFEG00010021940) #33	NPLOC4 (ENSRFEG00010021924) #34	FAAP100 (ENSRFEG00010021911)	FSCN2 (ENSRFEG00010021901) #35	ACTG1 (ENSRFEG00010021899)	BAHCC1 (ENSRFEG00010021891) #36
Microbat	MODERN SPECIES	2286											SIRT7 (ENSMLUG00000010150) #16	PCYT2 (ENSMLUG00000025217) #17	ENSMLUG00000028080 #19	ENSMLUG00000009555 #20	ARHGDIA (ENSMLUG00000027566) #21	P4HB (ENSMLUG00000029371) #22	PPP1R27 (ENSMLUG00000015901) #23
Carnivora	ANCESTRAL SPECIES	9	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Felidae	ANCESTRAL SPECIES	8	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Panthera	ANCESTRAL SPECIES	22	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Panthera_a	ANCESTRAL SPECIES	25	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
lion	MODERN SPECIES	14	RAC3 (ENSPLOG00000013659) #8	LRRC45 (ENSPLOG00000013726) #9	CENPX (ENSPLOG00000013800) #10	ASPSCR1 (ENSPLOG00000013985) #11	NOTUM (ENSPLOG00000014200) #12	MYADML2 (ENSPLOG00000014294) #13	PYCR1 (ENSPLOG00000014337) #14	MAFG (ENSPLOG00000014390) #15	ENSPLOG00000014440	SIRT7 (ENSPLOG00000014467) #16	PCYT2 (ENSPLOG00000014574) #17	NPB (ENSPLOG00000014759) #18	ENSPLOG00000014793	ALYREF (ENSPLOG00000014844) #20	ARHGDIA (ENSPLOG00000014933) #21	P4HB (ENSPLOG00000014997) #22	PPP1R27 (ENSPLOG00000015125) #23	MCRIP1 (ENSPLOG00000015210) #24	SLC25A10 (ENSPLOG00000015507) #26	MRPL12 (ENSPLOG00000015549) #27	HGS (ENSPLOG00000015616) #28	ARL16 (ENSPLOG00000015796) #29	CCDC137 (ENSPLOG00000015853) #30	OXLD1 (ENSPLOG00000015912) #31	PDE6G (ENSPLOG00000015931) #32	TSPAN10 (ENSPLOG00000015971) #33	NPLOC4 (ENSPLOG00000016061) #34	FAAP100 (ENSPLOG00000016258)	FSCN2 (ENSPLOG00000016301) #35	ACTG1 (ENSPLOG00000016355)	BAHCC1 (ENSPLOG00000016457) #36
leopard	MODERN SPECIES	48	RAC3 (ENSPPRG00000004931) #8	LRRC45 (ENSPPRG00000004552) #9	CENPX (ENSPPRG00000003565) #10	ENSPPRG00000002312 #11	NOTUM (ENSPPRG00000002167) #12	MYADML2 (ENSPPRG00000015152) #13	PYCR1 (ENSPPRG00000001277) #14	MAFG (ENSPPRG00000023338) #15	ENSPPRG00000023584	SIRT7 (ENSPPRG00000023633) #16	PCYT2 (ENSPPRG00000022510) #17	NPB (ENSPPRG00000012114) #18	ANAPC11 (ENSPPRG00000012006) #19	ALYREF (ENSPPRG00000010829) #20	ARHGDIA (ENSPPRG00000010407) #21	P4HB (ENSPPRG00000009805) #22	PPP1R27 (ENSPPRG00000007209) #23	MCRIP1 (ENSPPRG00000007085) #24	GCGR (ENSPPRG00000005699) #25	SLC25A10 (ENSPPRG00000004508) #26	MRPL12 (ENSPPRG00000002570) #27	HGS (ENSPPRG00000001891) #28	ARL16 (ENSPPRG00000000581) #29	CCDC137 (ENSPPRG00000000164) #30	OXLD1 (ENSPPRG00000022989) #31	PDE6G (ENSPPRG00000023200) #32	TSPAN10 (ENSPPRG00000023544) #33	NPLOC4 (ENSPPRG00000024069) #34	FAAP100 (ENSPPRG00000024560)	FSCN2 (ENSPPRG00000024836) #35	ACTG1 (ENSPPRG00000024869)
Tiger	MODERN SPECIES	125	RFNG (ENSPTIG00000018798)	ENSPTIG00000018178 ##7	RAC3 (ENSPTIG00000017075) #8	LRRC45 (ENSPTIG00000016256) #9	ENSPTIG00000014627 #11	NOTUM (ENSPTIG00000013756) #12	MYADML2 (ENSPTIG00000013478) #13	PYCR1 (ENSPTIG00000013184) #14	MAFG (ENSPTIG00000012995) #15	ENSPTIG00000012872	SIRT7 (ENSPTIG00000012630) #16	PCYT2 (ENSPTIG00000010590) #17	ANAPC11 (ENSPTIG00000009383) #19	ALYREF (ENSPTIG00000006399) #20	ARHGDIA (ENSPTIG00000005623) #21	ENSPTIG00000004821 #22	PPP1R27 (ENSPTIG00000002627) #23	ENSPTIG00000021030 #24	SLC25A10 (ENSPTIG00000020038) #26	MRPL12 (ENSPTIG00000019530) #27
Cat	MODERN SPECIES	245	DCXR (ENSFCAG00000045929) #7	RAC3 (ENSFCAG00000045564) #8	LRRC45 (ENSFCAG00000011666) #9	CENPX (ENSFCAG00000034437) #10	ASPSCR1 (ENSFCAG00000042003) #11	NOTUM (ENSFCAG00000011660) #12	MYADML2 (ENSFCAG00000015406) #13	PYCR1 (ENSFCAG00000044386) #14	MAFG (ENSFCAG00000035323) #15	SIRT7 (ENSFCAG00000007807) #16	PCYT2 (ENSFCAG00000030456) #17	NPB (ENSFCAG00000040387) #18	ENSFCAG00000016226	ALYREF (ENSFCAG00000022549) #20	ENSFCAG00000030567 #21	P4HB (ENSFCAG00000029560) #22	PPP1R27 (ENSFCAG00000026641) #23	MCRIP1 (ENSFCAG00000029556) #24	GCGR (ENSFCAG00000016364) #25	SLC25A10 (ENSFCAG00000012935) #26	MRPL12 (ENSFCAG00000047843) #27	HGS (ENSFCAG00000012926) #28	ARL16 (ENSFCAG00000018816) #29	CCDC137 (ENSFCAG00000012925) #30	OXLD1 (ENSFCAG00000043955) #31	PDE6G (ENSFCAG00000012923) #32	TSPAN10 (ENSFCAG00000012921) #33	NPLOC4 (ENSFCAG00000012919) #34	FAAP100 (ENSFCAG00000012918)	FSCN2 (ENSFCAG00000012915) #35	ACTG1 (ENSFCAG00000032144)
Caniformia	ANCESTRAL SPECIES	6	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Canidae	ANCESTRAL SPECIES	28	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Canis_lupus	ANCESTRAL SPECIES	34	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00910000148243	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Dog	MODERN SPECIES	37	LRRC45 (ENSCAFG00845008238) #9	CENPX (ENSCAFG00845008301) #10	ASPSCR1 (ENSCAFG00845008394) #11	NOTUM (ENSCAFG00845008511) #12	MYADML2 (ENSCAFG00845008558) #13	PYCR1 (ENSCAFG00845008603) #14	MAFG (ENSCAFG00845008746) #15	ENSCAFG00845008779	SIRT7 (ENSCAFG00845008831) #16	PCYT2 (ENSCAFG00845008933) #17	NPB (ENSCAFG00845009053) #18	ANAPC11 (ENSCAFG00845009082) #19	ENSCAFG00845009110	ALYREF (ENSCAFG00845009137) #20	ARHGDIA (ENSCAFG00845009197) #21	P4HB (ENSCAFG00845009297) #22	PPP1R27 (ENSCAFG00845009360) #23	ENSCAFG00845009427 #24	ENSCAFG00845009591 #25	SLC25A10 (ENSCAFG00845009761) #26	MRPL12 (ENSCAFG00845009823) #27	HGS (ENSCAFG00845009894) #28	CCDC137 (ENSCAFG00845010019) #30	ARL16 (ENSCAFG00845010117) #29	OXLD1 (ENSCAFG00845010153) #31	PDE6G (ENSCAFG00845010186) #32	ENSCAFG00845010214 #33	NPLOC4 (ENSCAFG00845010263) #34	ENSCAFG00845010378 ##18	FAAP100 (ENSCAFG00845010424)	FSCN2 (ENSCAFG00845010506) #35
Dingo	MODERN SPECIES	68	LRRC45 (ENSCAFG00020010194) #9	ENSCAFG00020010190	ASPSCR1 (ENSCAFG00020010181) #11	NOTUM (ENSCAFG00020010105) #12	MYADML2 (ENSCAFG00020010095) #13	PYCR1 (ENSCAFG00020009965) #14	ENSCAFG00020009954	MAFG (ENSCAFG00020009952) #15	SIRT7 (ENSCAFG00020009936) #16	PCYT2 (ENSCAFG00020009886) #17	NPB (ENSCAFG00020009877) #18	ANAPC11 (ENSCAFG00020009874) #19	ENSCAFG00020009872	ALYREF (ENSCAFG00020009815) #20	ARHGDIA (ENSCAFG00020009793) #21	P4HB (ENSCAFG00020009784) #22	PPP1R27 (ENSCAFG00020009781) #23	ENSCAFG00020009774 #24	ENSCAFG00020009754 #25	SLC25A10 (ENSCAFG00020009743) #26	HGS (ENSCAFG00020009730) #28	ARL16 (ENSCAFG00020009724) #29	CCDC137 (ENSCAFG00020009718) #30	OXLD1 (ENSCAFG00020009713) #31	PDE6G (ENSCAFG00020009698) #32	TSPAN10 (ENSCAFG00020009674) #33	ENSCAFG00020009672 ##18	NPLOC4 (ENSCAFG00020009257) #34	FAAP100 (ENSCAFG00020009233)	FSCN2 (ENSCAFG00020009227) #35	ACTG1 (ENSCAFG00020009054)
Red fox	MODERN SPECIES	31	RAC3 (ENSVVUG00000000774) #8	LRRC45 (ENSVVUG00000000739) #9	ENSVVUG00000000722 #10	ASPSCR1 (ENSVVUG00000000685) #11	NOTUM (ENSVVUG00000000527) #12	MYADML2 (ENSVVUG00000000508) #13	PYCR1 (ENSVVUG00000000480) #14	MAFG (ENSVVUG00000000421) #15	ENSVVUG00000000377	SIRT7 (ENSVVUG00000000353) #16	PCYT2 (ENSVVUG00000000345) #17	ANAPC11 (ENSVVUG00000000327) #19	ENSVVUG00000000291	ENSVVUG00000000272	ARHGDIA (ENSVVUG00000000060) #21	P4HB (ENSVVUG00000020076) #22	PPP1R27 (ENSVVUG00000020072) #23	MCRIP1 (ENSVVUG00000020069) #24	GCGR (ENSVVUG00000020015) #25	SLC25A10 (ENSVVUG00000020003) #26	MRPL12 (ENSVVUG00000020000) #27	HGS (ENSVVUG00000019977) #28	ARL16 (ENSVVUG00000019959) #29	CCDC137 (ENSVVUG00000019951) #30	OXLD1 (ENSVVUG00000019946) #31	PDE6G (ENSVVUG00000019936) #32	TSPAN10 (ENSVVUG00000019926) #33	NPLOC4 (ENSVVUG00000019455) #34	FAAP100 (ENSVVUG00000019385)	FSCN2 (ENSVVUG00000019375) #35	ENSVVUG00000019045
Caniformia_b	ANCESTRAL SPECIES	20	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B.b #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Mustelinae	ANCESTRAL SPECIES	1	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B.b #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
American mink	MODERN SPECIES	27	RAC3 (ENSNVIG00000016856) #8	LRRC45 (ENSNVIG00000016804) #9	ENSNVIG00000016794 #10	ASPSCR1 (ENSNVIG00000016783) #11	NOTUM (ENSNVIG00000016763) #12	MYADML2 (ENSNVIG00000016756) #13	PYCR1 (ENSNVIG00000016699) #14	ENSNVIG00000016688	MAFG (ENSNVIG00000016674) #15	SIRT7 (ENSNVIG00000016664) #16	PCYT2 (ENSNVIG00000016542) #17	NPB (ENSNVIG00000016522) #18	APC11 (ENSNVIG00000016465) #19	ALYREF (ENSNVIG00000016443) #20	ARHGDIA (ENSNVIG00000016417) #21	P4HB (ENSNVIG00000016345) #22	PPP1R27 (ENSNVIG00000016333) #23	MCRIP1 (ENSNVIG00000016259) #24	GCGR (ENSNVIG00000016239) #25	SLC25A10 (ENSNVIG00000016191) #26	MRPL12 (ENSNVIG00000016176) #27	HGS (ENSNVIG00000016154) #28	ENSNVIG00000016145 #29	CCDC137 (ENSNVIG00000016133) #30	OXLD1 (ENSNVIG00000016123) #31	PDE6G (ENSNVIG00000016105) #32	TSPAN10 (ENSNVIG00000016100) #33	NPLOC4 (ENSNVIG00000016063) #34	FAAP100 (ENSNVIG00000015999)	FSCN2 (ENSNVIG00000015970) #35	ACTG1 (ENSNVIG00000015943)
Ursidae	ANCESTRAL SPECIES	19	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000172941	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B.b #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Ursus	ANCESTRAL SPECIES	2	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00970000195292	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000172941	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B.b #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00940000159369
American black bear	MODERN SPECIES	329								PYCR1 (ENSUAMG00000016916) #14	MAFG (ENSUAMG00000016921) #15	SIRT7 (ENSUAMG00000016922) #16	PCYT2 (ENSUAMG00000016926) #17	ENSUAMG00000016928	ANAPC11 (ENSUAMG00000016930) #19	ALYREF (ENSUAMG00000016931) #20	ARHGDIA (ENSUAMG00000016932) #21	P4HB (ENSUAMG00000016935) #22	PPP1R27 (ENSUAMG00000016937) #23	MCRIP1 (ENSUAMG00000016940) #24	GCGR (ENSUAMG00000016941) #25
Polar bear	MODERN SPECIES	185	DUS1L (ENSUMAG00000016749)	ENSUMAG00000016740	GPS1 (ENSUMAG00000016667)	DCXR (ENSUMAG00000016659) #7	LRRC45 (ENSUMAG00000016469) #9	ENSUMAG00000016443	ENSUMAG00000016437 #11	ENSUMAG00000016433	PYCR1 (ENSUMAG00000016415) #14	ENSUMAG00000016409	SIRT7 (ENSUMAG00000016402) #16	PCYT2 (ENSUMAG00000016393) #17	ANAPC11 (ENSUMAG00000016388) #19	ALYREF (ENSUMAG00000016384) #20	ARHGDIA (ENSUMAG00000016378) #21	P4HB (ENSUMAG00000016360) #22	PPP1R27 (ENSUMAG00000016353) #23	MCRIP1 (ENSUMAG00000016343) #24	SLC25A10 (ENSUMAG00000016336) #26	MRPL12 (ENSUMAG00000016332) #27	HGS (ENSUMAG00000016322) #28	ARL16 (ENSUMAG00000016315) #29	CCDC137 (ENSUMAG00000016311) #30	ENSUMAG00000016309 #31	ENSUMAG00000016303 #33	NPLOC4 (ENSUMAG00000015627) #34	ENSUMAG00000015521	ACTG1 (ENSUMAG00000015490)	SLC38A10 (ENSUMAG00000015428)	TEPSIN (ENSUMAG00000015404)	ENSUMAG00000015384
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	4	RFNG (ENSAMEG00000017344)	ENSAMEG00000017356 ##7	DCXR (ENSAMEG00000030455) #7	RAC3 (ENSAMEG00000017364) #8	LRRC45 (ENSAMEG00000017370) #9	CENPX (ENSAMEG00000017384) #10	ASPSCR1 (ENSAMEG00000017387) #11	NOTUM (ENSAMEG00000017398) #12	MYADML2 (ENSAMEG00000018834) #13	PYCR1 (ENSAMEG00000026292) #14	MAFG (ENSAMEG00000026568) #15	PCYT2 (ENSAMEG00000017430) #17	ANAPC11 (ENSAMEG00000017462) #19	ALYREF (ENSAMEG00000017463) #20	ENSAMEG00000017468 #21	P4HB (ENSAMEG00000017476) #22	PPP1R27 (ENSAMEG00000017493) #23	MCRIP1 (ENSAMEG00000017494) #24	GCGR (ENSAMEG00000017496) #25	ENSAMEG00000023919 #26	MRPL12 (ENSAMEG00000017519) #27	HGS (ENSAMEG00000017535) #28	ARL16 (ENSAMEG00000017559) #29	ENSAMEG00000024545 #30	OXLD1 (ENSAMEG00000024263) #31	PDE6G (ENSAMEG00000017568) #32	TSPAN10 (ENSAMEG00000017574) #33	NPLOC4 (ENSAMEG00000017577) #34	ENSAMEG00000029610	FAAP100 (ENSAMEG00000016032)	FSCN2 (ENSAMEG00000024221) #35
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	2088																ENSAMEG00000031226 #22
Giant Panda	MODERN SPECIES	1055																ENSAMEG00000031476 #22
Giant Panda	MODERN SPECIES	980																ENSAMEG00000025529 #22
Atlantogenata	ANCESTRAL SPECIES	88	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35
Afrotheria	ANCESTRAL SPECIES	108	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31
Afrotheria_a	ANCESTRAL SPECIES	110	ENSGT00940000154873.g.a #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31
Hyrax	MODERN SPECIES	11501															ALYREF (ENSPCAG00000013162) #20	P4HB (ENSPCAG00000013095) #22	PPP1R27 (ENSPCAG00000013078) #23
Elephant	MODERN SPECIES	424	SLC16A3 (ENSLAFG00000006712)	CCDC57 (ENSLAFG00000003218)	FASN (ENSLAFG00000002825)	DUS1L (ENSLAFG00000003230)	GPS1 (ENSLAFG00000003228)	ENSLAFG00000006461 #11	NOTUM (ENSLAFG00000028104) #12	MYADML2 (ENSLAFG00000015539) #13	PYCR1 (ENSLAFG00000032379) #14	MAFG (ENSLAFG00000022780) #15	SIRT7 (ENSLAFG00000032323) #16	PCYT2 (ENSLAFG00000011423) #17	ANAPC11 (ENSLAFG00000031209) #19	ALYREF (ENSLAFG00000003083) #20	ARHGDIA (ENSLAFG00000022615) #21	P4HB (ENSLAFG00000001395) #22	PPP1R27 (ENSLAFG00000020936) #23	MCRIP1 (ENSLAFG00000027566) #24	GCGR (ENSLAFG00000029773) #25	SLC25A10 (ENSLAFG00000028721) #26	MRPL12 (ENSLAFG00000004594) #27	HGS (ENSLAFG00000004589) #28	ENSLAFG00000020767 #29	OXLD1 (ENSLAFG00000030315) #31	CCDC137 (ENSLAFG00000015867) #30	ENSLAFG00000032568 #29	PDE6G (ENSLAFG00000030364) #32	ENSLAFG00000013545 #33	NPLOC4 (ENSLAFG00000015865) #34	FAAP100 (ENSLAFG00000032189)	ENSLAFG00000029816 #35
Tenrec	MODERN SPECIES	7612																P4HB (ENSETEG00000019062) #22
Xenarthra	ANCESTRAL SPECIES	182									ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.d #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00410000025615 #20	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682
Armadillo	MODERN SPECIES	2454									NOTUM (ENSDNOG00000046049) #12	MYADML2 (ENSDNOG00000045051) #13	PYCR1 (ENSDNOG00000038292) #14	MAFG (ENSDNOG00000039734) #15	SIRT7 (ENSDNOG00000033372) #16	ENSDNOG00000025255 #17	ALYREF (ENSDNOG00000002563) #20	P4HB (ENSDNOG00000011748) #22	PPP1R27 (ENSDNOG00000041708) #23	ENSDNOG00000040064	ENSDNOG00000048341	MRPL12 (ENSDNOG00000042484) #27	HGS (ENSDNOG00000045166) #28	ARL16 (ENSDNOG00000042630) #29	CCDC137 (ENSDNOG00000049422) #30	ENSDNOG00000035905 #31	PDE6G (ENSDNOG00000047932) #32	TSPAN10 (ENSDNOG00000045169) #33	NPLOC4 (ENSDNOG00000002000) #34	FAAP100 (ENSDNOG00000043753)
Marsupialia	DUPLICATION
Marsupialia	ANCESTRAL SPECIES	13	ENSGT00940000154873.h ##7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.c.b ##14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351.i #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Marsupialia_b	ANCESTRAL SPECIES	16	ENSGT00940000154873.h ##7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.c.b ##14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351.i #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Diprotodontia	ANCESTRAL SPECIES	9	ENSGT00940000154873.h ##7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.c.b ##14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351.i #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Diprotodontia_a	ANCESTRAL SPECIES	11	ENSGT00940000154873.h ##7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a.c.b ##14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351.i #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000004169 #30	ENSGT00390000003596 #31	ENSGT00390000013260.B #32	ENSGT00940000160874 #33	ENSGT00390000018731 #34	ENSGT00390000016682	ENSGT00950000183157.a.a.a #35	ENSGT00950000182960.a.a.a.b
Common wonbat	MODERN SPECIES	571	ENSVURG00010008356 ##7	ENSVURG00010008364 #8	ENSVURG00010008371 #9	ENSVURG00010008390 #10	ASPSCR1 (ENSVURG00010008414) #11	NOTUM (ENSVURG00010008453) #12	MYADML2 (ENSVURG00010008473) #13	ENSVURG00010008481 ##14	MAFG (ENSVURG00010008523) #15	SIRT7 (ENSVURG00010008529) #16	PCYT2 (ENSVURG00010008544) #17	NPB (ENSVURG00010008622) #18	ENSVURG00010008630	ALYREF (ENSVURG00010008666) #20	ARHGDIA (ENSVURG00010008692) #21	ENSVURG00010008703 #22	PPP1R27 (ENSVURG00010008725) #23	MCRIP1 (ENSVURG00010008735) #24	GCGR (ENSVURG00010008760) #25	SLC25A10 (ENSVURG00010008775) #26	MRPL12 (ENSVURG00010008783) #27	ENSVURG00010008789 #26	HGS (ENSVURG00010008826) #28	ARL16 (ENSVURG00010008932) #29	CCDC137 (ENSVURG00010008950) #30	ENSVURG00010008979 #31	PDE6G (ENSVURG00010008961) #32	ENSVURG00010008987	ENSVURG00010008989 #33	NPLOC4 (ENSVURG00010008996) #34	FAAP100 (ENSVURG00010009045)
koala	MODERN SPECIES	87	RAC3 (ENSPCIG00000032841) #8	LRRC45 (ENSPCIG00000009160) #9	ENSPCIG00000009158 #10	ASPSCR1 (ENSPCIG00000009156) #11	NOTUM (ENSPCIG00000029541) #12	MYADML2 (ENSPCIG00000029543) #13	ENSPCIG00000029546 ##14	MAFG (ENSPCIG00000029551) #15	ENSPCIG00000036289	SIRT7 (ENSPCIG00000029553) #16	ENSPCIG00000029558 #18	PCYT2 (ENSPCIG00000029555) #17	ANAPC11 (ENSPCIG00000034264) #19	ENSPCIG00000030716 #20	ARHGDIA (ENSPCIG00000029571) #21	ENSPCIG00000029573 #22	PPP1R27 (ENSPCIG00000029575) #23	MCRIP1 (ENSPCIG00000029579) #24	GCGR (ENSPCIG00000029581) #25	SLC25A10 (ENSPCIG00000029584) #26	MRPL12 (ENSPCIG00000029585) #27	ENSPCIG00000036258 #26	HGS (ENSPCIG00000029590) #28	ARL16 (ENSPCIG00000029595) #29	CCDC137 (ENSPCIG00000029597) #30	ENSPCIG00000029601	PDE6G (ENSPCIG00000036613) #32	ENSPCIG00000029603 #33	NPLOC4 (ENSPCIG00000029604) #34	FAAP100 (ENSPCIG00000029607)	FSCN2 (ENSPCIG00000029609) #35
Wallaby	MODERN SPECIES	9198																ENSMEUG00000016727 #22
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000006078 ##7	ENSSHAG00000031637 ##7	ENSSHAG00000006654 #9	ENSSHAG00000031874 #10	ASPSCR1 (ENSSHAG00000007203) #11	ENSSHAG00000021097 #12	MYADML2 (ENSSHAG00000028792) #13	ENSSHAG00000009606 ##14	SIRT7 (ENSSHAG00000031971) #16	MAFG (ENSSHAG00000023116) #15	PCYT2 (ENSSHAG00000010103) #17	NPB (ENSSHAG00000027910) #18	ANAPC11 (ENSSHAG00000024741) #19	ALYREF (ENSSHAG00000031476) #20	ARHGDIA (ENSSHAG00000027581) #21	ENSSHAG00000031066 #22	PPP1R27 (ENSSHAG00000011363) #23	GCGR (ENSSHAG00000011733) #25	SLC25A10 (ENSSHAG00000024906) #26	ENSSHAG00000012486 #26	HGS (ENSSHAG00000012570) #28	ARL16 (ENSSHAG00000012708) #29	CCDC137 (ENSSHAG00000029821) #30	ENSSHAG00000029815 #31	PDE6G (ENSSHAG00000013112) #32	ENSSHAG00000013145 #33	NPLOC4 (ENSSHAG00000013303) #34	FAAP100 (ENSSHAG00000013761)	FSCN2 (ENSSHAG00000013996) #35	ACTG1 (ENSSHAG00000027849)	BAHCC1 (ENSSHAG00000014704) #36
Opossum	DUPLICATION
Opossum	DUPLICATION
Opossum	DUPLICATION
Opossum	MODERN SPECIES	7	AKAP3 (ENSMODG00000018285)	ENSMODG00000018283	GALNT8 (ENSMODG00000018265)	ENSMODG00000042219	ENSMODG00000028870	CLEC1B (ENSMODG00000045061)	CLEC1A (ENSMODG00000018258)	TMEM52B (ENSMODG00000051526)	ENSMODG00000018255	ENSMODG00000031298	ENSMODG00000027408	STYK1 (ENSMODG00000018249)	YBX3 (ENSMODG00000018248)	ENSMODG00000046415	ENSMODG00000038347 #22	ENSMODG00000040467 #22	ENSMODG00000050598 #22	ETV6 (ENSMODG00000018238)	ENSMODG00000051541	LRP6 (ENSMODG00000018237)	ENSMODG00000027882	BORCS5 (ENSMODG00000018234)	DUSP16 (ENSMODG00000018231)	ENSMODG00000024796	CREBL2 (ENSMODG00000051536)	CDKN1B (ENSMODG00000018225)	APOLD1 (ENSMODG00000024797)	DDX47 (ENSMODG00000018223)	GPRC5A (ENSMODG00000018220)	GPRC5D (ENSMODG00000018219)	HEBP1 (ENSMODG00000041008)
Opossum	MODERN SPECIES	7	DYRK4 (ENSMODG00000018287)	AKAP3 (ENSMODG00000018285)	ENSMODG00000018283	GALNT8 (ENSMODG00000018265)	ENSMODG00000042219	ENSMODG00000028870	CLEC1B (ENSMODG00000045061)	CLEC1A (ENSMODG00000018258)	TMEM52B (ENSMODG00000051526)	ENSMODG00000018255	ENSMODG00000031298	ENSMODG00000027408	STYK1 (ENSMODG00000018249)	YBX3 (ENSMODG00000018248)	ENSMODG00000046415	ENSMODG00000038347 #22	ENSMODG00000040467 #22	ENSMODG00000050598 #22	ETV6 (ENSMODG00000018238)	ENSMODG00000051541	LRP6 (ENSMODG00000018237)	ENSMODG00000027882	BORCS5 (ENSMODG00000018234)	DUSP16 (ENSMODG00000018231)	ENSMODG00000024796	CREBL2 (ENSMODG00000051536)	CDKN1B (ENSMODG00000018225)	APOLD1 (ENSMODG00000024797)	DDX47 (ENSMODG00000018223)	GPRC5A (ENSMODG00000018220)	GPRC5D (ENSMODG00000018219)
Opossum	MODERN SPECIES	7	ENSMODG00000018283	GALNT8 (ENSMODG00000018265)	ENSMODG00000042219	ENSMODG00000028870	CLEC1B (ENSMODG00000045061)	CLEC1A (ENSMODG00000018258)	TMEM52B (ENSMODG00000051526)	ENSMODG00000018255	ENSMODG00000031298	ENSMODG00000027408	STYK1 (ENSMODG00000018249)	YBX3 (ENSMODG00000018248)	ENSMODG00000046415	ENSMODG00000038347 #22	ENSMODG00000040467 #22	ENSMODG00000050598 #22	ETV6 (ENSMODG00000018238)	ENSMODG00000051541	LRP6 (ENSMODG00000018237)	ENSMODG00000027882	BORCS5 (ENSMODG00000018234)	DUSP16 (ENSMODG00000018231)	ENSMODG00000024796	CREBL2 (ENSMODG00000051536)	CDKN1B (ENSMODG00000018225)	APOLD1 (ENSMODG00000024797)	DDX47 (ENSMODG00000018223)	GPRC5A (ENSMODG00000018220)	GPRC5D (ENSMODG00000018219)	HEBP1 (ENSMODG00000041008)	FAM234B (ENSMODG00000018215)
Opossum	MODERN SPECIES	1	RAC3 (ENSMODG00000003244) #8	LRRC45 (ENSMODG00000003220) #9	ENSMODG00000046847 #11	NOTUM (ENSMODG00000003147) #12	ENSMODG00000046044	MYADML2 (ENSMODG00000003130) #13	ENSMODG00000003122 ##14	ENSMODG00000028952	MAFG (ENSMODG00000003081) #15	SIRT7 (ENSMODG00000003076) #16	PCYT2 (ENSMODG00000003065) #17	NPB (ENSMODG00000003041) #18	ANAPC11 (ENSMODG00000045017) #19	ALYREF (ENSMODG00000003030) #20	ARHGDIA (ENSMODG00000003014) #21	ENSMODG00000003000 #22	PPP1R27 (ENSMODG00000045877) #23	ENSMODG00000002923 #24	GCGR (ENSMODG00000002961) #25	SLC25A10 (ENSMODG00000002920) #26	MRPL12 (ENSMODG00000002902) #27	ENSMODG00000025675 #26	HGS (ENSMODG00000002800) #28	ARL16 (ENSMODG00000042918) #29	CCDC137 (ENSMODG00000002713) #30	ENSMODG00000048791 #31	PDE6G (ENSMODG00000002709) #32	ENSMODG00000002699 #33	ENSMODG00000002690 #34	ENSMODG00000044508	FAAP100 (ENSMODG00000002672)
Marsupialia	ANCESTRAL SPECIES		ENSGT00390000000403	ENSGT00950000183135.B.b	ENSGT00730000111063	ENSGT00940000164222	ENSGT00940000168868	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482	ENSGT00940000159204	ENSGT00940000155996	ENSGT00390000017265	ENSGT00940000156602	ENSGT00940000158288	ENSGT00940000157351.j #22	ENSGT00390000004068	ENSGT00940000155447	ENSGT00500000044926	ENSGT00940000165188	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157	ENSGT00940000156955	ENSGT00950000183145.E	ENSGT00390000005511	ENSGT00940000162108	ENSGT00950000183145.D	ENSGT00940000154525.b.a	ENSGT00390000017384
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00390000000403	ENSGT00950000183135.B.b	ENSGT00730000111063	ENSGT00940000164222	ENSGT00940000168868	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482	ENSGT00940000159204	ENSGT00940000155996	ENSGT00390000017265	ENSGT00940000156602	ENSGT00940000158288	ENSGT00940000157351.j #22	ENSGT00390000004068	ENSGT00940000155447	ENSGT00500000044926	ENSGT00390000016534.B	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157	ENSGT00940000156955	ENSGT00950000183145.E	ENSGT00390000012112	ENSGT00390000005511	ENSGT00940000162108	ENSGT00950000183145.D	ENSGT00940000154525.b.a
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT00390000000403	ENSGT00950000183135.B.b	ENSGT00730000111063	ENSGT00940000164222	ENSGT00940000168868	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482	ENSGT00940000159204	ENSGT00940000155996	ENSGT00390000017265	ENSGT00940000156602	ENSGT00940000158288	ENSGT00940000157351.j #22	ENSGT00390000004068	ENSGT00940000155447	ENSGT00500000044926	ENSGT00390000016534.B	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157	ENSGT00940000156955	ENSGT00950000183145.E	ENSGT00390000012112	ENSGT00390000005511	ENSGT00940000162108	ENSGT00950000183145.D	ENSGT00940000154525.b.a
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT00390000000403	ENSGT00950000183135.B.b	ENSGT00730000111063	ENSGT00940000164222	ENSGT00940000168868	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482	ENSGT00940000159204.e	ENSGT00940000155996	ENSGT00390000017265	ENSGT00940000156602	ENSGT00940000158288	ENSGT00940000157351.j #22	ENSGT00390000004068	ENSGT00940000155447	ENSGT00500000044926	ENSGT00390000016534.B	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157	ENSGT00940000156955	ENSGT00950000183145.E	ENSGT00390000012112	ENSGT00390000005511	ENSGT00940000162108	ENSGT00950000183145.D	ENSGT00940000154525.b.a
Common wonbat	MODERN SPECIES	1067											ENSVURG00010017263	INPP5F (ENSVURG00010017282)	MCMBP (ENSVURG00010017481)	SEC23IP (ENSVURG00010017493)	PLPP4 (ENSVURG00010017515)	ENSVURG00010017529 #22	WDR11 (ENSVURG00010017552)	FGFR2 (ENSVURG00010017618)	ATE1 (ENSVURG00010017712)	ENSVURG00010017748	ENSVURG00010017780	BTBD16 (ENSVURG00010018157)	ENSVURG00010018198	PLEKHA1 (ENSVURG00010018214)	HTRA1 (ENSVURG00010018270)	ENSVURG00010018555	ENSVURG00010018628	ENSVURG00010018656	ENSVURG00010018659	CUZD1 (ENSVURG00010018665)	C10orf88 (ENSVURG00010018674)
koala	MODERN SPECIES	30	CACUL1 (ENSPCIG00000028427)	ENSPCIG00000028425	EIF3A (ENSPCIG00000028414)	ENSPCIG00000028412	ENSPCIG00000035490	ENSPCIG00000028409	PRDX3 (ENSPCIG00000028403)	GRK5 (ENSPCIG00000003189)	RGS10 (ENSPCIG00000003153)	TIAL1 (ENSPCIG00000003120)	ENSPCIG00000003103	INPP5F (ENSPCIG00000003062)	MCMBP (ENSPCIG00000003033)	SEC23IP (ENSPCIG00000003012)	PLPP4 (ENSPCIG00000030825)	ENSPCIG00000019316 #22	WDR11 (ENSPCIG00000004026)	FGFR2 (ENSPCIG00000004047)
Wallaby	MODERN SPECIES	12333																ENSMEUG00000011583 #22
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000026913	CACUL1 (ENSSHAG00000007970)	NANOS1 (ENSSHAG00000029338)	EIF3A (ENSSHAG00000001347)	ENSSHAG00000014680	ENSSHAG00000014575	PRDX3 (ENSSHAG00000014541)	GRK5 (ENSSHAG00000013446)	RGS10 (ENSSHAG00000024740)	TIAL1 (ENSSHAG00000012508)	BAG3 (ENSSHAG00000012049)	INPP5F (ENSSHAG00000010978)	MCMBP (ENSSHAG00000010768)	SEC23IP (ENSSHAG00000010548)	PLPP4 (ENSSHAG00000022918)	ENSSHAG00000013721 #22	WDR11 (ENSSHAG00000012828)	FGFR2 (ENSSHAG00000006217)	ATE1 (ENSSHAG00000028389)	ENSSHAG00000013127	ENSSHAG00000012962	ENSSHAG00000009993	ENSSHAG00000011665	BTBD16 (ENSSHAG00000010960)	PLEKHA1 (ENSSHAG00000024626)	HTRA1 (ENSSHAG00000009284)	ENSSHAG00000007803	ENSSHAG00000007217	ENSSHAG00000022182	ENSSHAG00000023839	ENSSHAG00000028811
Opossum	MODERN SPECIES		ENSMODG00000009342	NANOS1 (ENSMODG00000009319)	EIF3A (ENSMODG00000009316)	ENSMODG00000009292	ENSMODG00000009286	GRK5 (ENSMODG00000009266)	ENSMODG00000024855	RGS10 (ENSMODG00000047360)	ENSMODG00000008865	BAG3 (ENSMODG00000008764)	INPP5F (ENSMODG00000008751)	MCMBP (ENSMODG00000008714)	SEC23IP (ENSMODG00000008685)	ENSMODG00000038446	PLPP4 (ENSMODG00000008644)	ENSMODG00000008634 #22	ENSMODG00000039409	WDR11 (ENSMODG00000008627)	FGFR2 (ENSMODG00000008525)	ENSMODG00000008447	ENSMODG00000036472	ENSMODG00000044877	ATE1 (ENSMODG00000008434)	ENSMODG00000008405	ENSMODG00000008327	ENSMODG00000038482	BTBD16 (ENSMODG00000008285)	PLEKHA1 (ENSMODG00000008263)	HTRA1 (ENSMODG00000008235)	ENSMODG00000008170	ENSMODG00000007900
Platypus	MODERN SPECIES	45	RFNG (ENSOANG00000043623)	DCXR (ENSOANG00000031279) #7	RAC3 (ENSOANG00000043748) #8	LRRC45 (ENSOANG00000009662) #9	ENSOANG00000041923 #10	ENSOANG00000047793	NOTUM (ENSOANG00000005271) #12	ENSOANG00000005270 #14	MAFG (ENSOANG00000015302) #15	SIRT7 (ENSOANG00000050375) #16	PCYT2 (ENSOANG00000042255) #17	ANAPC11 (ENSOANG00000037265) #19	ENSOANG00000040764	ALYREF (ENSOANG00000043693) #20	ARHGDIA (ENSOANG00000043105) #21	P4HB (ENSOANG00000006117) #22	PPP1R27 (ENSOANG00000047327) #23	MCRIP1 (ENSOANG00000047679) #24	GCGR (ENSOANG00000050606) #25	ENSOANG00000022362 #26	MRPL12 (ENSOANG00000035985) #27	ENSOANG00000044154 #26	HGS (ENSOANG00000013033) #28	ENSOANG00000041410 #29	ENSOANG00000029084 #30	PDE6G (ENSOANG00000039095) #32	NPLOC4 (ENSOANG00000010555) #34	FAAP100 (ENSOANG00000041730)	FSCN2 (ENSOANG00000050676) #35	ACTG1 (ENSOANG00000048512)	BAHCC1 (ENSOANG00000042968) #36
Sauria	ANCESTRAL SPECIES	29	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00390000010750.b	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000001663	ENSGT01050000244894.b.b	ENSGT01050000244894.a.a.a.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00510000047537
Archelosauria	ANCESTRAL SPECIES	19	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00390000010750.b	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000001663	ENSGT01050000244894.b.b	ENSGT00940000175759	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000011615.A
Cryptodira	ANCESTRAL SPECIES	72	ENSGT00940000154873 #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23
Testudinoidea	ANCESTRAL SPECIES	14	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00390000018868.B.a	ENSGT01100000266789	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00390000010750.b	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000001663	ENSGT01050000244894.b.b	ENSGT00950000182935.B.a.g	ENSGT00940000175759	ENSGT00950000182935.B.a.h	ENSGT00390000011309	ENSGT00390000011093
Emydidae	ANCESTRAL SPECIES	17	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT01040000244454	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT01100000266789	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00390000010750.b	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000001663	ENSGT01050000244894.b.b	ENSGT00950000182935.B.a.g	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000011615.A	ENSGT00390000014681
painted turtle	MODERN SPECIES	696	NOTUM (ENSCPBG00000011513) #12	MYADML2 (ENSCPBG00000011512) #13	ENSCPBG00000011510 #14	MAFG (ENSCPBG00000011509) #15	SIRT7 (ENSCPBG00000011508) #16	PCYT2 (ENSCPBG00000011506) #17	NPB (ENSCPBG00000011498) #18	ANAPC11 (ENSCPBG00000011495) #19	ARHGDIA (ENSCPBG00000011492) #21	PPP1R27 (ENSCPBG00000011488) #23	MCRIP1 (ENSCPBG00000011486) #24	GCGR (ENSCPBG00000011482) #25	SLC25A10 (ENSCPBG00000011479) #26	MRPL12 (ENSCPBG00000011476) #27	ENSCPBG00000011475	P4HB (ENSCPBG00000011401) #22	HGS (ENSCPBG00000011393) #28	ARL16 (ENSCPBG00000011391) #29	ENSCPBG00000011388	TMC6 (ENSCPBG00000011384)	SYNGR2 (ENSCPBG00000011381)	TK1 (ENSCPBG00000011378)	AFMID (ENSCPBG00000011375)	TMEM235 (ENSCPBG00000011373)	ENSCPBG00000011372	SOCS3 (ENSCPBG00000011367)	PGS1 (ENSCPBG00000011364)	DNAH17 (ENSCPBG00000011116)	CYTH1 (ENSCPBG00000010964)	USP36 (ENSCPBG00000010951)	TIMP2 (ENSCPBG00000010949)
Three-toed box turtle	MODERN SPECIES	90	RFNG (ENSTMTG00000011835)	LRRC45 (ENSTMTG00000011851) #9	ENSTMTG00000011883	ASPSCR1 (ENSTMTG00000011893) #11	NOTUM (ENSTMTG00000011935) #12	MYADML2 (ENSTMTG00000011965) #13	ENSTMTG00000011977 #14	MAFG (ENSTMTG00000011992) #15	SIRT7 (ENSTMTG00000011995) #16	PCYT2 (ENSTMTG00000012015) #17	ENSTMTG00000012031	ANAPC11 (ENSTMTG00000012041) #19	ENSTMTG00000012048	ALYREF (ENSTMTG00000012075) #20	ARHGDIA (ENSTMTG00000012093) #21	P4HB (ENSTMTG00000012117) #22	PPP1R27 (ENSTMTG00000012161) #23	MCRIP1 (ENSTMTG00000012171) #24	GCGR (ENSTMTG00000012194) #25	SLC25A10 (ENSTMTG00000012302) #26	MRPL12 (ENSTMTG00000012324) #27	ENSTMTG00000012362	HGS (ENSTMTG00000012385) #28	ENSTMTG00000012484 #29	TMC6 (ENSTMTG00000012508)	AFMID (ENSTMTG00000012531)	TMEM235 (ENSTMTG00000012552)	ENSTMTG00000012570	SOCS3 (ENSTMTG00000012586)	PGS1 (ENSTMTG00000012594)	DNAH17 (ENSTMTG00000012674)
Testudinidae	ANCESTRAL SPECIES	18	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00390000018868.B.a	ENSGT01100000266789	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00390000010750.b	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000001663	ENSGT01050000244894.b.b	ENSGT00940000175759	ENSGT00950000182935.B.a.h	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000011615.A
Goode s thornscrub tortoise	MODERN SPECIES	6	DCXR (ENSGEVG00005005913) #7	RAC3 (ENSGEVG00005005878) #8	LRRC45 (ENSGEVG00005005834) #9	CENPX (ENSGEVG00005005809) #10	ASPSCR1 (ENSGEVG00005005760) #11	NOTUM (ENSGEVG00005005722) #12	MYADML2 (ENSGEVG00005015384) #13	ENSGEVG00005015367 #14	MAFG (ENSGEVG00005015353) #15	SIRT7 (ENSGEVG00005015330) #16	NPB (ENSGEVG00005015259) #18	ANAPC11 (ENSGEVG00005015171) #19	ENSGEVG00005015146	ALYREF (ENSGEVG00005015119) #20	ARHGDIA (ENSGEVG00005015089) #21	P4HB (ENSGEVG00005015053) #22	PPP1R27 (ENSGEVG00005015035) #23	MCRIP1 (ENSGEVG00005014977) #24	GCGR (ENSGEVG00005014865) #25	SLC25A10 (ENSGEVG00005014834) #26	MRPL12 (ENSGEVG00005014817) #27	ENSGEVG00005014784	HGS (ENSGEVG00005014712) #28	ARL16 (ENSGEVG00005014676) #29	TMC6 (ENSGEVG00005014627)	SYNGR2 (ENSGEVG00005014599)	TK1 (ENSGEVG00005014575)	AFMID (ENSGEVG00005014547)	TMEM235 (ENSGEVG00005014425)	ENSGEVG00005014383	SOCS3 (ENSGEVG00005014364)
Abingdon island giant tortoise	MODERN SPECIES	2471	RFNG (ENSCABG00000009991)	DCXR (ENSCABG00000009989) #7	RAC3 (ENSCABG00000009948) #8	LRRC45 (ENSCABG00000009945) #9	ASPSCR1 (ENSCABG00000009943) #11	NOTUM (ENSCABG00000009940) #12	MYADML2 (ENSCABG00000009938) #13	ENSCABG00000009786 #14	MAFG (ENSCABG00000009773) #15	SIRT7 (ENSCABG00000009752) #16	PCYT2 (ENSCABG00000009749) #17	ENSCABG00000009746	ANAPC11 (ENSCABG00000009743) #19	ENSCABG00000009655	ARHGDIA (ENSCABG00000009649) #21	P4HB (ENSCABG00000009644) #22	PPP1R27 (ENSCABG00000009641) #23
Chinese turtle	MODERN SPECIES	732		DCXR (ENSPSIG00000012771) #7	RAC3 (ENSPSIG00000013271) #8	LRRC45 (ENSPSIG00000013415) #9	CENPX (ENSPSIG00000014344) #10	ASPSCR1 (ENSPSIG00000014415) #11	NOTUM (ENSPSIG00000015016) #12	MYADML2 (ENSPSIG00000000650) #13	ENSPSIG00000015420 #14	MAFG (ENSPSIG00000015955) #15	SIRT7 (ENSPSIG00000016168) #16	PCYT2 (ENSPSIG00000016328) #17	ANAPC11 (ENSPSIG00000017538) #19	ALYREF (ENSPSIG00000017541) #20	ARHGDIA (ENSPSIG00000017574) #21	P4HB (ENSPSIG00000017694) #22	MCRIP1 (ENSPSIG00000017780) #24
Archosauria	ANCESTRAL SPECIES	12	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000001663	ENSGT01050000244894.b.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000014681	ENSGT00940000159620.a	ENSGT00390000002373
Aves	ANCESTRAL SPECIES	17	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000001663	ENSGT01050000244894.b.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000014681	ENSGT00940000159620.a	ENSGT00390000002373
African ostrich	MODERN SPECIES	398	FASN (ENSSCUG00000006321)	DUS1L (ENSSCUG00000006305)	GPS1 (ENSSCUG00000006295)	RFNG (ENSSCUG00000006284)	DCXR (ENSSCUG00000006278) #7	RAC3 (ENSSCUG00000006273) #8	LRRC45 (ENSSCUG00000006270) #9	ASPSCR1 (ENSSCUG00000006263) #11	NOTUM (ENSSCUG00000006259) #12	MYADML2 (ENSSCUG00000006255) #13	ENSSCUG00000006253 #14	MAFG (ENSSCUG00000006250) #15	SIRT7 (ENSSCUG00000006245) #16	PCYT2 (ENSSCUG00000006240) #17	ARHGDIA (ENSSCUG00000006238) #21	P4HB (ENSSCUG00000006235) #22	PPP1R27 (ENSSCUG00000006233) #23	SLC25A10 (ENSSCUG00000006229) #26	HGS (ENSSCUG00000006223) #28	ARL16 (ENSSCUG00000006222) #29	ENSSCUG00000006218	ENSSCUG00000006217	SYNGR2 (ENSSCUG00000006214)	TK1 (ENSSCUG00000006213)	AFMID (ENSSCUG00000006211)	ENSSCUG00000006207
Neognathae	ANCESTRAL SPECIES	17	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000001663	ENSGT01050000244894.b.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000014681	ENSGT00940000159620.a	ENSGT00390000002373
Neognathae_b	ANCESTRAL SPECIES	19	ENSGT00940000154873 #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT01050000244894.b.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000014681	ENSGT00940000159620.a	ENSGT00390000002373	ENSGT00940000154076.C.c
Passeriformes	ANCESTRAL SPECIES	17	ENSGT00940000160801	ENSGT00940000154873 #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT01050000244894.b.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000014681	ENSGT00940000159620.a	ENSGT00390000002373	ENSGT00940000154076.C.c
Great tit	MODERN SPECIES	8	RFNG (ENSPMJG00000015219)	DCXR (ENSPMJG00000015220) #7	RAC3 (ENSPMJG00000015221) #8	LRRC45 (ENSPMJG00000015222) #9	CENPX (ENSPMJG00000015223) #10	ASPSCR1 (ENSPMJG00000015224) #11	NOTUM (ENSPMJG00000015225) #12	MYADML2 (ENSPMJG00000015226) #13	ENSPMJG00000015227 #14	MAFG (ENSPMJG00000015228) #15	SIRT7 (ENSPMJG00000015229) #16	PCYT2 (ENSPMJG00000015230) #17	ENSPMJG00000015258	ALYREF (ENSPMJG00000015260) #20	ARHGDIA (ENSPMJG00000015261) #21	P4HB (ENSPMJG00000015262) #22	PPP1R27 (ENSPMJG00000015263) #23	ENSPMJG00000015264	GCGR (ENSPMJG00000015265) #25	SLC25A10 (ENSPMJG00000015266) #26	MRPL12 (ENSPMJG00000015267) #27	HGS (ENSPMJG00000015268) #28	ARL16 (ENSPMJG00000015269) #29	TMC6 (ENSPMJG00000015270)	ENSPMJG00000015271	TK1 (ENSPMJG00000015272)	AFMID (ENSPMJG00000015273)	ENSPMJG00000015274	SOCS3 (ENSPMJG00000015276)	PGS1 (ENSPMJG00000015277)	DNAH17 (ENSPMJG00000015278)
Passeriformes_d	ANCESTRAL SPECIES	17	ENSGT00940000160801	ENSGT00940000154873 #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853.b #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT01050000244894.b.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000014681	ENSGT00940000159620.a	ENSGT00390000002373	ENSGT00940000154076.C.c
Passeriformes_g	ANCESTRAL SPECIES	20	ENSGT00510000046608.A	ENSGT00940000160801	ENSGT00940000154873 #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853.b #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT01050000244894.b.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000014681	ENSGT00940000159620.a	ENSGT00390000002373	ENSGT00940000154076.C.c
Medium ground finch	MODERN SPECIES	275	DUS1L (ENSGFOG00000007480)	GPS1 (ENSGFOG00000007516)	RFNG (ENSGFOG00000007548)	DCXR (ENSGFOG00000007921) #7	RAC3 (ENSGFOG00000007929) #8	LRRC45 (ENSGFOG00000007947) #9	ASPSCR1 (ENSGFOG00000008057) #11	NOTUM (ENSGFOG00000008075) #12	MYADML2 (ENSGFOG00000008092) #13	ENSGFOG00000008097 #14	MAFG (ENSGFOG00000008127) #15	SIRT7 (ENSGFOG00000008132) #16	PCYT2 (ENSGFOG00000008139) #17	ALYREF (ENSGFOG00000008154) #20	ARHGDIA (ENSGFOG00000008160) #21	P4HB (ENSGFOG00000008177) #22	PPP1R27 (ENSGFOG00000008676) #23	GCGR (ENSGFOG00000008687) #25	SLC25A10 (ENSGFOG00000008692) #26	HGS (ENSGFOG00000008697) #28	ARL16 (ENSGFOG00000008708) #29	TMC6 (ENSGFOG00000008723)	SYNGR2 (ENSGFOG00000008761)	TK1 (ENSGFOG00000008764)	AFMID (ENSGFOG00000008770)	ENSGFOG00000008776	SOCS3 (ENSGFOG00000008780)	PGS1 (ENSGFOG00000008783)	DNAH17 (ENSGFOG00000008797)	CYTH1 (ENSGFOG00000008888)	USP36 (ENSGFOG00000009140)
Passeroidea	ANCESTRAL SPECIES	19	ENSGT00550000075089	ENSGT00510000046608.A	ENSGT00940000160801	ENSGT00940000154873 #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853.b #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00550000075065 #17	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00940000167007	ENSGT01050000244894.b.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000014681	ENSGT00940000159620.a	ENSGT00390000002373	ENSGT00940000154076.C.c
Zebra finch	MODERN SPECIES	9	DUS1L (ENSTGUG00000003700)	GPS1 (ENSTGUG00000003677)	RFNG (ENSTGUG00000003665)	DCXR (ENSTGUG00000003657) #7	RAC3 (ENSTGUG00000003640) #8	LRRC45 (ENSTGUG00000003614) #9	CENPX (ENSTGUG00000021305) #10	ASPSCR1 (ENSTGUG00000003598) #11	NOTUM (ENSTGUG00000003588) #12	MYADML2 (ENSTGUG00000018944) #13	PYCR1 (ENSTGUG00000003568) #14	MAFG (ENSTGUG00000025880) #15	PCYT2 (ENSTGUG00000018159) #17	ALYREF (ENSTGUG00000003513) #20	ARHGDIA (ENSTGUG00000003498) #21	P4HB (ENSTGUG00000003472) #22	ENSTGUG00000029350 #24	GCGR (ENSTGUG00000021801) #25	SLC25A10 (ENSTGUG00000003450) #26	MRPL12 (ENSTGUG00000026791) #27	HGS (ENSTGUG00000003410) #28	ENSTGUG00000003409	TMC6 (ENSTGUG00000003385)	SYNGR2 (ENSTGUG00000024749)	TK1 (ENSTGUG00000003364)	AFMID (ENSTGUG00000003351)	ENSTGUG00000003348	SOCS3 (ENSTGUG00000003345)	PGS1 (ENSTGUG00000003319)	DNAH17 (ENSTGUG00000003207)	CYTH1 (ENSTGUG00000025105)
Common canary	MODERN SPECIES	27	FASN (ENSSCAG00000010546)	DUS1L (ENSSCAG00000010566)	GPS1 (ENSSCAG00000010573)	RFNG (ENSSCAG00000010584)	DCXR (ENSSCAG00000010604) #7	RAC3 (ENSSCAG00000010611) #8	LRRC45 (ENSSCAG00000010677) #9	ASPSCR1 (ENSSCAG00000010847) #11	NOTUM (ENSSCAG00000010854) #12	MYADML2 (ENSSCAG00000010870) #13	ENSSCAG00000010880 #14	MAFG (ENSSCAG00000010892) #15	PCYT2 (ENSSCAG00000010923) #17	ALYREF (ENSSCAG00000011009) #20	ARHGDIA (ENSSCAG00000011033) #21	P4HB (ENSSCAG00000011084) #22	PPP1R27 (ENSSCAG00000011194) #23	GCGR (ENSSCAG00000011196) #25	SLC25A10 (ENSSCAG00000011205) #26	HGS (ENSSCAG00000011212) #28	ENSSCAG00000011219	TMC6 (ENSSCAG00000011224)	SYNGR2 (ENSSCAG00000011235)	TK1 (ENSSCAG00000011238)	AFMID (ENSSCAG00000011239)	ENSSCAG00000011246	SOCS3 (ENSSCAG00000011249)	PGS1 (ENSSCAG00000011253)	DNAH17 (ENSSCAG00000011368)	CYTH1 (ENSSCAG00000011741)	USP36 (ENSSCAG00000011753)
Flycatcher	MODERN SPECIES	8	RFNG (ENSFALG00000011734)	DCXR (ENSFALG00000011767) #7	RAC3 (ENSFALG00000026223) #8	LRRC45 (ENSFALG00000011778) #9	ENSFALG00000011812 #10	ENSFALG00000011820 #11	ENSFALG00000024215 #11	NOTUM (ENSFALG00000011833) #12	MYADML2 (ENSFALG00000015000) #13	PYCR1 (ENSFALG00000011847) #14	MAFG (ENSFALG00000024283) #15	PCYT2 (ENSFALG00000011906) #17	ANAPC11 (ENSFALG00000025589) #19	ALYREF (ENSFALG00000011923) #20	ARHGDIA (ENSFALG00000028901) #21	P4HB (ENSFALG00000011969) #22	PPP1R27 (ENSFALG00000028022) #23	MCRIP1 (ENSFALG00000011985) #24	GCGR (ENSFALG00000012013) #25	ENSFALG00000022990	HGS (ENSFALG00000012102) #28	ARL16 (ENSFALG00000027283) #29	TMC6 (ENSFALG00000012134)	SYNGR2 (ENSFALG00000012155)	TK1 (ENSFALG00000012163)	ENSFALG00000028851	ENSFALG00000012187	PGS1 (ENSFALG00000012194)	DNAH17 (ENSFALG00000011945)	USP36 (ENSFALG00000012224)	CANT1 (ENSFALG00000012207)
Neognathae_c	ANCESTRAL SPECIES	23	ENSGT00940000160801	ENSGT00940000154873 #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT01050000244894.b.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000014681	ENSGT00940000159620.a	ENSGT00390000002373	ENSGT00940000154076.C.c
Kakapo	MODERN SPECIES	8	GPS1 (ENSSHBG00005011463)	RFNG (ENSSHBG00005011437)	DCXR (ENSSHBG00005011406) #7	RAC3 (ENSSHBG00005011395) #8	LRRC45 (ENSSHBG00005011369) #9	ENSSHBG00005011342 #10	ASPSCR1 (ENSSHBG00005011310) #11	NOTUM (ENSSHBG00005011282) #12	ENSSHBG00005011260 #14	MAFG (ENSSHBG00005011241) #15	SIRT7 (ENSSHBG00005011213) #16	PCYT2 (ENSSHBG00005011146) #17	ENSSHBG00005011107	ALYREF (ENSSHBG00005011088) #20	ARHGDIA (ENSSHBG00005000712) #21	P4HB (ENSSHBG00005015547) #22	PPP1R27 (ENSSHBG00005015539) #23	MCRIP1 (ENSSHBG00005015533) #24	GCGR (ENSSHBG00005015523) #25	SLC25A10 (ENSSHBG00005015521) #26	MRPL12 (ENSSHBG00005015519) #27	HGS (ENSSHBG00005015512) #28	ARL16 (ENSSHBG00005015503) #29	TMC6 (ENSSHBG00005015490)	SYNGR2 (ENSSHBG00005015481)	TK1 (ENSSHBG00005015476)	AFMID (ENSSHBG00005015471)	ENSSHBG00005015465	SOCS3 (ENSSHBG00005015463)	PGS1 (ENSSHBG00005015453)	ENSSHBG00005015438
Golden eagle	MODERN SPECIES	21	GPS1 (ENSACCG00020001719)	RFNG (ENSACCG00020001702)	DCXR (ENSACCG00020001685) #7	RAC3 (ENSACCG00020001622) #8	LRRC45 (ENSACCG00020001234) #9	ASPSCR1 (ENSACCG00020001016) #11	NOTUM (ENSACCG00020000977) #12	MYADML2 (ENSACCG00020000961) #13	ENSACCG00020000945 #14	MAFG (ENSACCG00020000933) #15	SIRT7 (ENSACCG00020000914) #16	PCYT2 (ENSACCG00020000884) #17	ENSACCG00020000870 #18	ALYREF (ENSACCG00020000850) #20	ARHGDIA (ENSACCG00020000821) #21	P4HB (ENSACCG00020000794) #22	PPP1R27 (ENSACCG00020000769) #23	ENSACCG00020000750 #24	GCGR (ENSACCG00020000726) #25	SLC25A10 (ENSACCG00020000689) #26	MRPL12 (ENSACCG00020000666) #27	HGS (ENSACCG00020000637) #28	ARL16 (ENSACCG00020000592) #29	TMC6 (ENSACCG00020000550)	SYNGR2 (ENSACCG00020000492)	TK1 (ENSACCG00020000470)	AFMID (ENSACCG00020000431)	ENSACCG00020000418	SOCS3 (ENSACCG00020000394)	PGS1 (ENSACCG00020000382)	ENSACCG00020000348
Galloanserae	ANCESTRAL SPECIES	19	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000001663	ENSGT01050000244894.b.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000014681	ENSGT00940000159620.a	ENSGT00390000002373
Anatidae	ANCESTRAL SPECIES	63	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000001663	ENSGT01050000244894.b.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000014681	ENSGT00940000159620.a	ENSGT00390000002373
Duck	MODERN SPECIES	9			CSNK1D (ENSAPLG00000004969)	SLC16A3 (ENSAPLG00000004860)	FASN (ENSAPLG00000002703)	DUS1L (ENSAPLG00000001965)	GPS1 (ENSAPLG00000016288)	RFNG (ENSAPLG00000016029)	RAC3 (ENSAPLG00000015982) #8	LRRC45 (ENSAPLG00000015594) #9	NOTUM (ENSAPLG00000015427) #12	MYADML2 (ENSAPLG00000002229) #13	PCYT2 (ENSAPLG00000014755) #17	NPB (ENSAPLG00000022175) #18	ARHGDIA (ENSAPLG00000017298) #21	P4HB (ENSAPLG00000014245) #22	ENSAPLG00000020957	SLC25A10 (ENSAPLG00000014178) #26	RBFOX3 (ENSAPLG00000029113)	ENPP7 (ENSAPLG00000021105)	CBX4 (ENSAPLG00000023770)	TBC1D16 (ENSAPLG00000014159)	ENSAPLG00000002081	ENSAPLG00000017387	ENSAPLG00000026023	RNF213 (ENSAPLG00000002904)	ENDOV (ENSAPLG00000003471)	ENSAPLG00000011777	BAIAP2 (ENSAPLG00000012542)	AATK (ENSAPLG00000030122)	ENSAPLG00000012946
Pink-footed goose	MODERN SPECIES	276	RAC3 (ENSABRG00000010609) #8	LRRC45 (ENSABRG00000010618) #9	CENPX (ENSABRG00000010656) #10	ASPSCR1 (ENSABRG00000010659) #11	NOTUM (ENSABRG00000010679) #12	MYADML2 (ENSABRG00000010684) #13	ENSABRG00000010686 #14	MAFG (ENSABRG00000010690) #15	SIRT7 (ENSABRG00000010708) #16	PCYT2 (ENSABRG00000010865) #17	NPB (ENSABRG00000011159) #18	ANAPC11 (ENSABRG00000011160) #19	ENSABRG00000011165	ALYREF (ENSABRG00000011176) #20	ARHGDIA (ENSABRG00000011188) #21	P4HB (ENSABRG00000011233) #22	PPP1R27 (ENSABRG00000011240) #23	MCRIP1 (ENSABRG00000011244) #24	GCGR (ENSABRG00000011281) #25	SLC25A10 (ENSABRG00000011343) #26	MRPL12 (ENSABRG00000011352) #27	HGS (ENSABRG00000011359) #28	ENSABRG00000011372 #29	ENSABRG00000011375	TMC6 (ENSABRG00000011377)	SYNGR2 (ENSABRG00000011383)	TK1 (ENSABRG00000011386)	AFMID (ENSABRG00000011396)	ENSABRG00000011404	SOCS3 (ENSABRG00000011408)	PGS1 (ENSABRG00000011411)
Phasianidae	DUPLICATION
Phasianidae	ANCESTRAL SPECIES																	ENSGT00940000157351.r #22
Phasianidae_b	ANCESTRAL SPECIES																	ENSGT00940000157351.r #22
Chicken	MODERN SPECIES		GPR19 (ENSGALG00010021891)	CREBL2 (ENSGALG00010021879)	DUSP16 (ENSGALG00010021661)	BORCS5 (ENSGALG00010021652)	MANSC1 (ENSGALG00010021419)	LRP6 (ENSGALG00010021562)	ENSGALG00010023151	ETV6 (ENSGALG00010023137)	ZC3HAV1 (ENSGALG00010023107)	ENSGALG00010023084	ENSGALG00010026220	PKDREJ (ENSGALG00010023075)	CDPF1 (ENSGALG00010023068)	PPARA (ENSGALG00010023058)	WNT7B (ENSGALG00010012373)	ENSGALG00010014896 #22	ATXN10 (ENSGALG00010012329)	FBLN1 (ENSGALG00010012285)	RIBC2 (ENSGALG00010012206)	SMC1B (ENSGALG00010012104)	UPK3A (ENSGALG00010012099)	KIAA0930 (ENSGALG00010012074)	NUP50 (ENSGALG00010012043)	PHF21B (ENSGALG00010011895)	ARHGAP8 (ENSGALG00010013376)	ENSGALG00010013368	ENSGALG00010013366	PRR5 (ENSGALG00010013360)	KIAA1644 (ENSGALG00010013343)	PARVG (ENSGALG00010013324)	PARVB (ENSGALG00010013301)
Phasianidae	ANCESTRAL SPECIES	18	ENSGT00940000154873 #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351.s #22	ENSGT00940000159603 #23	ENSGT00940000175873	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000001663	ENSGT01050000244894.b.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00390000014681	ENSGT00940000159620.a	ENSGT00390000002373	ENSGT00940000154076.C.c
Phasianidae_b	ANCESTRAL SPECIES	62										ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351.s #22	ENSGT00940000159603 #23
Turkey	MODERN SPECIES	12	ENSMGAG00000005989	ENSMGAG00000005976	ENSMGAG00000005827	ENSMGAG00000005817	AFMID (ENSMGAG00000005781)	ENSMGAG00000005812	ENSMGAG00000020177	ENSMGAG00000005771	ENSMGAG00000005714 #29	ENSMGAG00000005728	ENSMGAG00000005652 #28	ENSMGAG00000019001 #27	ENSMGAG00000014310 #26	ENSMGAG00000022746 #24	ENSMGAG00000005435 #25	P4HB (ENSMGAG00000005412) #22	PPP1R27 (ENSMGAG00000005431) #23	ARHGDIA (ENSMGAG00000005399) #21	ENSMGAG00000018917	ENSMGAG00000018341 #17	ENSMGAG00000022871 #18	SIRT7 (ENSMGAG00000005333) #16	MAFG (ENSMGAG00000021829) #15	ENSMGAG00000005323 #14	ENSMGAG00000005309 #12	ENSMGAG00000015417 #13	ASPSCR1 (ENSMGAG00000005293) #11	ENSMGAG00000020560	ENSMGAG00000005276 #9	ENSMGAG00000005237 #7	ENSMGAG00000005256 #8
Chicken	MODERN SPECIES	9	SPATA20 (ENSGALG00010029636)	CACNA1G (ENSGALG00010029724)	ABCC3 (ENSGALG00010029290)	ANKRD40 (ENSGALG00010029287)	LUC7L3 (ENSGALG00010029282)	WFIKKN2 (ENSGALG00010029277)	TOB1 (ENSGALG00010029263)	SPAG9 (ENSGALG00010029250)	NME1 (ENSGALG00010029243)	PYCR1 (ENSGALG00010029288) #14	MAFG (ENSGALG00010029286) #15	PCYT2 (ENSGALG00010029275) #17	ANAPC11 (ENSGALG00010029364) #18	ALYREF (ENSGALG00010029361) #20	ARHGDIA (ENSGALG00010029357) #21	P4HB (ENSGALG00010030104) #22	MCRIP1 (ENSGALG00010029355) #24	GCGR (ENSGALG00010029353) #25	ENSGALG00010029351 #26	MRPL12 (ENSGALG00010029350) #27	HGS (ENSGALG00010029348) #28	ARL16 (ENSGALG00010029346) #29	ENSGALG00010029344	TMC6 (ENSGALG00010029342)	SYNGR2 (ENSGALG00010029336)	TK1 (ENSGALG00010029331)	AFMID (ENSGALG00010029330)	ENSGALG00010029329	SOCS3 (ENSGALG00010029295)	PGS1 (ENSGALG00010029294)	DNAH17 (ENSGALG00010029293)
Japanese quail	MODERN SPECIES	9	DCXR (ENSCJPG00005021080) #7	RAC3 (ENSCJPG00005021081) #8	LRRC45 (ENSCJPG00005021082) #9	CENPX (ENSCJPG00005021096) #10	ASPSCR1 (ENSCJPG00005021097) #11	NOTUM (ENSCJPG00005021098) #12	MYADML2 (ENSCJPG00005021101) #13	ENSCJPG00005021103 #14	MAFG (ENSCJPG00005021107) #15	SIRT7 (ENSCJPG00005021108) #16	PCYT2 (ENSCJPG00005021110) #17	NPB (ENSCJPG00005021154) #18	ANAPC11 (ENSCJPG00005021155) #19	ALYREF (ENSCJPG00005021156) #20	ARHGDIA (ENSCJPG00005021157) #21	P4HB (ENSCJPG00005021158) #22	PPP1R27 (ENSCJPG00005021162) #23	ENSCJPG00005021163	HGS (ENSCJPG00005021166) #28	MRPL12 (ENSCJPG00005021167) #27	ARL16 (ENSCJPG00005021168) #29	ENSCJPG00005021169	SYNGR2 (ENSCJPG00005021171)	TK1 (ENSCJPG00005021172)	AFMID (ENSCJPG00005021173)	ENSCJPG00005021174	SOCS3 (ENSCJPG00005021175)	PGS1 (ENSCJPG00005021176)	CYTH1 (ENSCJPG00005021178)	USP36 (ENSCJPG00005021179)	TIMP2 (ENSCJPG00005021180)
Lepidosauria	ANCESTRAL SPECIES	28	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00390000010750.b	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT00390000001663	ENSGT01050000244894.b.b	ENSGT01050000244894.a.a.a.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00510000047537
tuatara	MODERN SPECIES	1429	CACNA1G (ENSSPUG00000010451)	ENSSPUG00000010581	ENSSPUG00000010603	ANKRD40 (ENSSPUG00000010652)	LUC7L3 (ENSSPUG00000010664)	ENSSPUG00000010689	TOB1 (ENSSPUG00000010699)	ENSSPUG00000010712	ENSSPUG00000010733	ENSSPUG00000010757	NME1 (ENSSPUG00000010785)	NME2 (ENSSPUG00000010826)	MBTD1 (ENSSPUG00000010840)	UTP18 (ENSSPUG00000010862)	ARHGDIA (ENSSPUG00000010913) #21	P4HB (ENSSPUG00000010934) #22	PPP1R27 (ENSSPUG00000010964) #23	MCRIP1 (ENSSPUG00000010978) #24	GCGR (ENSSPUG00000011005) #25	SLC25A10 (ENSSPUG00000011030) #26	MRPL12 (ENSSPUG00000011062) #27	ENSSPUG00000011067	HGS (ENSSPUG00000011094) #28	ARL16 (ENSSPUG00000011195) #29	ENSSPUG00000011216	TMC6 (ENSSPUG00000011230)	SYNGR2 (ENSSPUG00000011258)	TK1 (ENSSPUG00000011273)	AFMID (ENSSPUG00000011285)	BIRC5 (ENSSPUG00000011300)	ENSSPUG00000011317
Episquamata	ANCESTRAL SPECIES	4	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00390000010750.b	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT01050000244894.b.b	ENSGT01050000244894.a.a.a.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00510000047537	ENSGT00390000011615.A
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT01050000244894.b.b	ENSGT01050000244894.a.a.a.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00510000047537	ENSGT00390000011615.A	ENSGT00940000159620.a
Lizard	DUPLICATION
Lizard	MODERN SPECIES	1	RAC3 (ENSACAG00000010192) #8	LRRC45 (ENSACAG00000010215) #9	ENSACAG00000045280	ASPSCR1 (ENSACAG00000010247) #11	NOTUM (ENSACAG00000010278) #12	MYADML2 (ENSACAG00000010270) #13	ENSACAG00000010316 #14	MAFG (ENSACAG00000010413) #15	SIRT7 (ENSACAG00000010434) #16	PCYT2 (ENSACAG00000010492) #17	NPB (ENSACAG00000022358) #18	ANAPC11 (ENSACAG00000040037) #19	ALYREF (ENSACAG00000010526) #20	ENSACAG00000038140	ARHGDIA (ENSACAG00000010539) #21	P4HB (ENSACAG00000010570) #22	ENSACAG00000037071	PPP1R27 (ENSACAG00000010634) #23	MCRIP1 (ENSACAG00000010637) #24	GCGR (ENSACAG00000010639) #25	ENSACAG00000010699	SLC25A10 (ENSACAG00000010703) #26	MRPL12 (ENSACAG00000010743) #27	ENSACAG00000010756	ADGRE5 (ENSACAG00000010832)	ENSACAG00000010837	ENSACAG00000036844	ENSACAG00000042578	ENSACAG00000012254	ENSACAG00000037509	ENSACAG00000042776
Lizard	MODERN SPECIES	1979																ENSACAG00000015377 #22	AXIN1 (ENSACAG00000015327)	MRPL28 (ENSACAG00000015301)	PGAP6 (ENSACAG00000015267)
Elapidae	ANCESTRAL SPECIES	2	ENSGT00940000154873 #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327.g #29	ENSGT01050000244894.b.b	ENSGT00940000175759	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00510000047537	ENSGT00390000011615.A	ENSGT00940000159620.a
Indian cobra	DUPLICATION
Indian cobra	MODERN SPECIES	1	DCXR (ENSNNAG00000012074) #7	RAC3 (ENSNNAG00000012134) #8	LRRC45 (ENSNNAG00000012156) #9	CENPX (ENSNNAG00000012219) #10	ENSNNAG00000012257 #11	NOTUM (ENSNNAG00000012288) #12	MYADML2 (ENSNNAG00000012342) #13	ENSNNAG00000012353 #14	MAFG (ENSNNAG00000012361) #15	SIRT7 (ENSNNAG00000012376) #16	PCYT2 (ENSNNAG00000012404) #17	NPB (ENSNNAG00000012440) #18	ANAPC11 (ENSNNAG00000012477) #19	ALYREF (ENSNNAG00000012493) #20	ARHGDIA (ENSNNAG00000012520) #21	P4HB (ENSNNAG00000012550) #22	PPP1R27 (ENSNNAG00000012631) #23	MCRIP1 (ENSNNAG00000012644) #24	GCGR (ENSNNAG00000012659) #25	SLC25A10 (ENSNNAG00000012719) #26	MRPL12 (ENSNNAG00000012741) #27	HGS (ENSNNAG00000012756) #28	ARL16 (ENSNNAG00000012800) #29	TMC6 (ENSNNAG00000012816)	SYNGR2 (ENSNNAG00000012870)	TK1 (ENSNNAG00000012888)	AFMID (ENSNNAG00000012946)	BIRC5 (ENSNNAG00000012975)	TMEM235 (ENSNNAG00000012995)	SOCS3 (ENSNNAG00000013027)	ENSNNAG00000013033
Indian cobra	MODERN SPECIES	15							ITPRIPL2 (ENSNNAG00000008618)	ENSNNAG00000008524	ENSNNAG00000008503	COX19 (ENSNNAG00000008475)	ENSNNAG00000008370	TRAP1 (ENSNNAG00000008321)	FAM234A (ENSNNAG00000008278)	RGS11 (ENSNNAG00000008144)	ENSNNAG00000008122	ENSNNAG00000008075 #22	AXIN1 (ENSNNAG00000008009)	PGAP6 (ENSNNAG00000007903)	ENSNNAG00000007878	MPG (ENSNNAG00000007859)	NPRL3 (ENSNNAG00000007664)	RHBDF1 (ENSNNAG00000007552)	ENSNNAG00000007526	GTF3C1 (ENSNNAG00000007319)	ENSNNAG00000007271	ADCY9 (ENSNNAG00000007240)	SRL (ENSNNAG00000007205)	TFAP4 (ENSNNAG00000007177)	GLIS2 (ENSNNAG00000007161)	PAM16 (ENSNNAG00000007144)	VASN (ENSNNAG00000007135)
Elapidae_a	ANCESTRAL SPECIES	18	ENSGT00940000154873 #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b.w #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327.g #29	ENSGT01050000244894.b.b	ENSGT00940000175759	ENSGT00950000182935.B.a.e	ENSGT00390000011309	ENSGT00390000011093	ENSGT00510000047537	ENSGT00390000011615.A	ENSGT00940000159620.a
Blue-lipped sea krait	DUPLICATION
Blue-lipped sea krait	MODERN SPECIES	4674																P4HB (ENSLLTG00000008671) #22	PPP1R27 (ENSLLTG00000008658) #23	MCRIP1 (ENSLLTG00000008650) #24
Blue-lipped sea krait	MODERN SPECIES	6130											CREBBP (ENSLLTG00000011894)	ENSLLTG00000011875	TRAP1 (ENSLLTG00000011855)	FAM234A (ENSLLTG00000011838)	RGS11 (ENSLLTG00000011790)	ENSLLTG00000011763 #22	AXIN1 (ENSLLTG00000011736)	MRPL28 (ENSLLTG00000011694)	PGAP6 (ENSLLTG00000011653)	ENSLLTG00000011628	NPRL3 (ENSLLTG00000011575)	MPG (ENSLLTG00000011546)	RHBDF1 (ENSLLTG00000011484)	POLR3K (ENSLLTG00000011455)	GTF3C1 (ENSLLTG00000011327)	KATNIP (ENSLLTG00000011222)	ADCY9 (ENSLLTG00000011103)	SRL (ENSLLTG00000011032)	TFAP4 (ENSLLTG00000010998)	GLIS2 (ENSLLTG00000010961)	PAM16 (ENSLLTG00000010937)
Acanthophiinae	ANCESTRAL SPECIES	18	ENSGT00940000154873 #7	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00410000025615 #20	ENSGT00390000006233.c.b.w #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327.g #29	ENSGT01050000244894.b.b	ENSGT00940000175759	ENSGT00950000182935.B.a.e	ENSGT00390000011309	ENSGT00390000011093	ENSGT00510000047537	ENSGT00390000011615.A	ENSGT00940000159620.a
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	17	RFNG (ENSPTXG00000003317)	DCXR (ENSPTXG00000003314) #7	RAC3 (ENSPTXG00000003313) #8	LRRC45 (ENSPTXG00000003307) #9	ASPSCR1 (ENSPTXG00000003305) #11	NOTUM (ENSPTXG00000003302) #12	MYADML2 (ENSPTXG00000003301) #13	ENSPTXG00000003298 #14	MAFG (ENSPTXG00000003296) #15	SIRT7 (ENSPTXG00000003294) #16	PCYT2 (ENSPTXG00000003292) #17	NPB (ENSPTXG00000003291) #18	ANAPC11 (ENSPTXG00000003290) #19	ALYREF (ENSPTXG00000003288) #20	ENSPTXG00000003287 #21	P4HB (ENSPTXG00000003285) #22	PPP1R27 (ENSPTXG00000003284) #23	MCRIP1 (ENSPTXG00000003281) #24	GCGR (ENSPTXG00000003276) #25	SLC25A10 (ENSPTXG00000003266) #26	MRPL12 (ENSPTXG00000003264) #27	HGS (ENSPTXG00000003262) #28	ARL16 (ENSPTXG00000003261) #29	TMC6 (ENSPTXG00000003259)	ENSPTXG00000003257	TK1 (ENSPTXG00000003256)	AFMID (ENSPTXG00000003255)	BIRC5 (ENSPTXG00000003254)	TMEM235 (ENSPTXG00000003253)	SOCS3 (ENSPTXG00000003252)	PGS1 (ENSPTXG00000003251)
Eastern brown snake	MODERN SPECIES	24										CREBBP (ENSPTXG00000000240)	ENSPTXG00000000225	TRAP1 (ENSPTXG00000000181)	FAM234A (ENSPTXG00000000159)	RGS11 (ENSPTXG00000000111)	ENSPTXG00000000081	ENSPTXG00000014195 #22	AXIN1 (ENSPTXG00000014194)	ENSPTXG00000014193	MRPL28 (ENSPTXG00000014192)	PGAP6 (ENSPTXG00000014191)	ENSPTXG00000014190	ENSPTXG00000014189	NPRL3 (ENSPTXG00000014188)	MPG (ENSPTXG00000014187)	RHBDF1 (ENSPTXG00000014186)	POLR3K (ENSPTXG00000014185)	GTF3C1 (ENSPTXG00000013157)	KATNIP (ENSPTXG00000013044)	ADCY9 (ENSPTXG00000012976)	SRL (ENSPTXG00000012971)	TFAP4 (ENSPTXG00000012968)
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	19	RAC3 (ENSNSUG00000010663) #8	LRRC45 (ENSNSUG00000010657) #9	CENPX (ENSNSUG00000010655) #10	ENSNSUG00000010654	ENSNSUG00000010653	NOTUM (ENSNSUG00000010647) #12	MYADML2 (ENSNSUG00000010646) #13	ENSNSUG00000010644 #14	MAFG (ENSNSUG00000010642) #15	SIRT7 (ENSNSUG00000010641) #16	PCYT2 (ENSNSUG00000010638) #17	NPB (ENSNSUG00000010637) #18	ANAPC11 (ENSNSUG00000010635) #19	ALYREF (ENSNSUG00000010633) #20	ENSNSUG00000010631 #21	P4HB (ENSNSUG00000010628) #22	PPP1R27 (ENSNSUG00000010625) #23	MCRIP1 (ENSNSUG00000010623) #24	GCGR (ENSNSUG00000010619) #25	SLC25A10 (ENSNSUG00000010557) #26	MRPL12 (ENSNSUG00000010556) #27	HGS (ENSNSUG00000010079) #28	ARL16 (ENSNSUG00000010073) #29	ENSNSUG00000010070	ENSNSUG00000010068	ENSNSUG00000010067	TK1 (ENSNSUG00000010059)	AFMID (ENSNSUG00000010057)	BIRC5 (ENSNSUG00000010055)	TMEM235 (ENSNSUG00000010052)	SOCS3 (ENSNSUG00000010049)
Mainland tiger snake	MODERN SPECIES	193											CREBBP (ENSNSUG00000004756)	ENSNSUG00000004736	TRAP1 (ENSNSUG00000004735)	FAM234A (ENSNSUG00000004734)	RGS11 (ENSNSUG00000004731)	ENSNSUG00000004729 #22	AXIN1 (ENSNSUG00000004728)	MRPL28 (ENSNSUG00000004685)	PGAP6 (ENSNSUG00000004682)	ENSNSUG00000004680	ENSNSUG00000004334	NPRL3 (ENSNSUG00000004312)	MPG (ENSNSUG00000004310)	ENSNSUG00000004308	ENSNSUG00000004306	SNRNP25 (ENSNSUG00000004304)	ENSNSUG00000004296	GTF3C1 (ENSNSUG00000004005)	ENSNSUG00000003998	ADCY9 (ENSNSUG00000003842)	SRL (ENSNSUG00000003833)
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204.a #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00390000010750.b	ENSGT00940000158297 #28	ENSGT00730000111327 #29	ENSGT01050000244894.b.b	ENSGT01050000244894.a.a.a.b	ENSGT00950000182935.B.a	ENSGT00390000011309	ENSGT00390000011093	ENSGT00510000047537	ENSGT00390000011615.A
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	10	RAC3 (ENSPMRG00000005998) #8	LRRC45 (ENSPMRG00000005990) #9	ENSPMRG00000005982	ASPSCR1 (ENSPMRG00000005960) #11	ENSPMRG00000005956	NOTUM (ENSPMRG00000005949) #12	MYADML2 (ENSPMRG00000005941) #13	ENSPMRG00000005867 #14	MAFG (ENSPMRG00000005856) #15	SIRT7 (ENSPMRG00000005848) #16	PCYT2 (ENSPMRG00000005834) #17	NPB (ENSPMRG00000005829) #18	ANAPC11 (ENSPMRG00000005826) #19	ENSPMRG00000005818	ALYREF (ENSPMRG00000005805) #20	P4HB (ENSPMRG00000005775) #22	ENSPMRG00000005757	PPP1R27 (ENSPMRG00000005749) #23	MCRIP1 (ENSPMRG00000005738) #24	GCGR (ENSPMRG00000005725) #25	SLC25A10 (ENSPMRG00000004568) #26	MRPL12 (ENSPMRG00000004553) #27	ENSPMRG00000004543	HGS (ENSPMRG00000004531) #28	ARL16 (ENSPMRG00000004522) #29	TMC6 (ENSPMRG00000004507)	TMC8 (ENSPMRG00000004500)	SYNGR2 (ENSPMRG00000004494)	TK1 (ENSPMRG00000004491)	AFMID (ENSPMRG00000004478)	BIRC5 (ENSPMRG00000004450)
Common wall lizard	MODERN SPECIES	5					ENSPMRG00000016823	ENSPMRG00000016803	ENSPMRG00000016789	ENSPMRG00000016781	ENSPMRG00000016776	CREBBP (ENSPMRG00000015838)	ENSPMRG00000015667	TRAP1 (ENSPMRG00000015650)	FAM234A (ENSPMRG00000015637)	RGS11 (ENSPMRG00000015574)	ENSPMRG00000015558	ENSPMRG00000015488 #22	AXIN1 (ENSPMRG00000015461)	MRPL28 (ENSPMRG00000015452)	PGAP6 (ENSPMRG00000015449)	ENSPMRG00000015444	ENSPMRG00000015439	NPRL3 (ENSPMRG00000015431)	MPG (ENSPMRG00000015423)	ENSPMRG00000015416	ENSPMRG00000015404	ENSPMRG00000015398	POLR3K (ENSPMRG00000015396)	ENSPMRG00000015365	ENSPMRG00000015337	ENSPMRG00000015329	GTF3C1 (ENSPMRG00000015287)
Argentine black and white tegu	DUPLICATION
Argentine black and white tegu	MODERN SPECIES	1	RAC3 (ENSSMRG00000023340) #8	LRRC45 (ENSSMRG00000023341) #9	CENPX (ENSSMRG00000023342) #10	ASPSCR1 (ENSSMRG00000023343) #11	NOTUM (ENSSMRG00000023345) #12	MYADML2 (ENSSMRG00000023346) #13	ENSSMRG00000023347 #14	MAFG (ENSSMRG00000023348) #15	SIRT7 (ENSSMRG00000023349) #16	PCYT2 (ENSSMRG00000023350) #17	NPB (ENSSMRG00000023351) #18	ANAPC11 (ENSSMRG00000023352) #19	ALYREF (ENSSMRG00000023353) #20	ENSSMRG00000023354	ARHGDIA (ENSSMRG00000023355) #21	P4HB (ENSSMRG00000023356) #22	PPP1R27 (ENSSMRG00000023357) #23	MCRIP1 (ENSSMRG00000023358) #24	GCGR (ENSSMRG00000023359) #25	SLC25A10 (ENSSMRG00000023360) #26	MRPL12 (ENSSMRG00000023361) #27	ENSSMRG00000023362	HGS (ENSSMRG00000023363) #28	ARL16 (ENSSMRG00000023364) #29	TMC6 (ENSSMRG00000023365)	TMC8 (ENSSMRG00000023366)	SYNGR2 (ENSSMRG00000023367)	TK1 (ENSSMRG00000023368)	AFMID (ENSSMRG00000023369)	ENSSMRG00000023370	TMEM235 (ENSSMRG00000023371)
Argentine black and white tegu	MODERN SPECIES	132	ENSSMRG00000007754	EMP2 (ENSSMRG00000007753)	TEKT5 (ENSSMRG00000007752)	NUBP1 (ENSSMRG00000007751)	TVP23A (ENSSMRG00000007750)	ENSSMRG00000007747	DEXI (ENSSMRG00000007745)	CLEC16A (ENSSMRG00000007739)	SOCS1 (ENSSMRG00000007736)	CREBBP (ENSSMRG00000007723)	ENSSMRG00000007720	TRAP1 (ENSSMRG00000006768)	FAM234A (ENSSMRG00000006757)	RGS11 (ENSSMRG00000006655)	ENSSMRG00000006645	ENSSMRG00000006621 #22	AXIN1 (ENSSMRG00000006609)	MRPL28 (ENSSMRG00000006606)	PGAP6 (ENSSMRG00000006597)	ENSSMRG00000006593	ENSSMRG00000006589	ENSSMRG00000006587	ENSSMRG00000006583	ENSSMRG00000006582	NPRL3 (ENSSMRG00000006579)	MPG (ENSSMRG00000006576)	RHBDF1 (ENSSMRG00000006549)	SNRNP25 (ENSSMRG00000006542)	POLR3K (ENSSMRG00000006538)	GTF3C1 (ENSSMRG00000006508)	KATNIP (ENSSMRG00000006474)
Anura	ANCESTRAL SPECIES	156	ENSGT00940000153500.a.b #8	ENSGT00940000154003.B #9	ENSGT00390000002725 #10	ENSGT00940000156853 #11	ENSGT00390000015892 #12	ENSGT00950000182933.A.a.a #13	ENSGT00950000183044.a.a.a #14	ENSGT00940000160070 #15	ENSGT00940000159703 #16	ENSGT00550000075065 #17	ENSGT00940000158204 #18	ENSGT00550000075186 #19	ENSGT00950000184814	ENSGT00410000025615 #20	ENSGT00390000006233.c.b #21	ENSGT00940000157351 #22	ENSGT00940000159603 #23	ENSGT00940000161850 #24	ENSGT00940000157969 #25	ENSGT00940000156783 #26	ENSGT00390000000190 #27	ENSGT00940000158297 #28	ENSGT00730000111327 #29
Leishan spiny toad	MODERN SPECIES	3	DCXR (ENSLLEG00000021335) #7	RAC3 (ENSLLEG00000021407) #8	LRRC45 (ENSLLEG00000021617) #9	ASPSCR1 (ENSLLEG00000021997) #11	NOTUM (ENSLLEG00000022427) #12	MYADML2 (ENSLLEG00000022540) #13	ENSLLEG00000022594 #14	ENSLLEG00000023044	MAFG (ENSLLEG00000023068) #15	SIRT7 (ENSLLEG00000023129) #16	PCYT2 (ENSLLEG00000023287) #17	ENSLLEG00000023951 #18	ANAPC11 (ENSLLEG00000024010) #19	ENSLLEG00000024044	ALYREF (ENSLLEG00000024115) #20	P4HB (ENSLLEG00000024303) #22	PPP1R27 (ENSLLEG00000024447) #23	ENSLLEG00000024596	MCRIP1 (ENSLLEG00000024645) #24	GCGR (ENSLLEG00000024760) #25	SLC25A10 (ENSLLEG00000024848) #26	MRPL12 (ENSLLEG00000024958) #27	HGS (ENSLLEG00000025098) #28	ARL16 (ENSLLEG00000026440) #29	ATAD5 (ENSLLEG00000026505)	TEFM (ENSLLEG00000026859)	ADAP2 (ENSLLEG00000026912)	CA10 (ENSLLEG00000027020)	ENSLLEG00000027267	TOM1L1 (ENSLLEG00000027300)	COX11 (ENSLLEG00000027412)
Frog	MODERN SPECIES	1	ENSXETG00000046582	slc38a10 (ENSXETG00000015401)	ENSXETG00000037346	tepsin (ENSXETG00000015400)	cep131 (ENSXETG00000016930)	abo2 (ENSXETG00000015399)	myadml2 (ENSXETG00000005379) #13	pycr1 (ENSXETG00000005381) #14	sirt7 (ENSXETG00000005388) #16	pcyt2 (ENSXETG00000005389) #17	npb (ENSXETG00000033774) #18	anapc11 (ENSXETG00000035263) #19	ENSXETG00000048030	alyref (ENSXETG00000005391) #20	arhgdia (ENSXETG00000025477) #21	p4hb (ENSXETG00000005405) #22	ppp1r27 (ENSXETG00000034485) #23	mcrip1 (ENSXETG00000042099) #24	gcgr (ENSXETG00000005421) #25	slc25a10 (ENSXETG00000019705) #26	mrpl12 (ENSXETG00000040341) #27	hgs (ENSXETG00000019701) #28	arl16 (ENSXETG00000025485)	slc16a3 (ENSXETG00000019700)	ccdc57 (ENSXETG00000034430)	fasn (ENSXETG00000019666)	dus1l (ENSXETG00000019654)	gps1 (ENSXETG00000019653)	rfng (ENSXETG00000019657)	card14 (ENSXETG00000019652)	sgsh (ENSXETG00000019651)
Coelacanth	MODERN SPECIES	257	DUS1L (ENSLACG00000011348)	LRRC45 (ENSLACG00000011122) #9	ENSLACG00000010847	NOTUM (ENSLACG00000010522) #12	ENSLACG00000009319 #11	CENPX (ENSLACG00000022125) #10	SIRT7 (ENSLACG00000008982) #16	pycr1a (ENSLACG00000008611) #14	ENSLACG00000008166	PCYT2 (ENSLACG00000007326) #17	gnav1 (ENSLACG00000006337)	npb (ENSLACG00000006178) #18	ALYREF (ENSLACG00000005694) #20	ARHGDIA (ENSLACG00000005116) #21	ANAPC11 (ENSLACG00000004812) #19	P4HB (ENSLACG00000003663) #22	PPP1R27 (ENSLACG00000003211) #23	ENSLACG00000002264