Gnathostomata ANCESTRAL SPECIES 1111 ENSGT00390000000204 ENSGT00950000182895.a.b #22 ENSGT00390000011596.b Euteleostomi ANCESTRAL SPECIES 524 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00390000011596.b ENSGT00940000164193 ENSGT00940000159666 ENSGT00940000158336 ENSGT00390000003582 Sarcopterygii ANCESTRAL SPECIES 90 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b #22 ENSGT00390000011596.b ENSGT00940000164193 ENSGT00940000159666 ENSGT00940000158336 ENSGT00390000003582 ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00950000182990.b ENSGT00390000013574 ENSGT00940000156964.C ENSGT00390000001244 Tetrapoda ANCESTRAL SPECIES 229 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b Amniota ANCESTRAL SPECIES 43 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000155124 ENSGT00940000157773 ENSGT00940000156970 ENSGT00940000158597 ENSGT00940000162100 ENSGT00940000157403 ENSGT00940000156474 ENSGT01030000234527.B Mammalia ANCESTRAL SPECIES 7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000163601 ENSGT00940000162768.B ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000155124 ENSGT00940000157773 ENSGT00940000156970 ENSGT00940000158597 ENSGT00940000162100 ENSGT00940000157403 ENSGT00940000156474 ENSGT01030000234527.B Theria ANCESTRAL SPECIES 58 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00940000163601 ENSGT00940000162768.B ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00940000163258 #24 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000155124 Eutheria ANCESTRAL SPECIES 5 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00940000163601 ENSGT00940000162768.B ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00940000163258 #24 ENSGT00940000163845 #30 ENSGT00940000158579 #35 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 ENSGT00940000158579 #35 ENSGT00940000163845 #30 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163258 #24 ENSGT00940000163845 #30 ENSGT00940000158579 #35 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Primates ANCESTRAL SPECIES 1 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163258 #24 ENSGT00940000163845 #30 ENSGT00940000158579 #35 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Haplorrhini ANCESTRAL SPECIES 22 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163258.i #24 ENSGT00940000163845 #30 ENSGT00940000158579 #35 ENSGT00940000163527 #25 ENSGT00940000164049 #31 ENSGT00940000163258.j ##24 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 Simiiformes ANCESTRAL SPECIES 1 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000158579.l.a ##35 ENSGT00940000163258.i.a #24 ENSGT00940000163845.c #33 ENSGT00940000163258.i.b #32 ENSGT00940000158579.l.b.b.b #37 ENSGT00940000163258.j ##24 ENSGT00940000158579.l.b.b.a #35 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 25 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b #22 ENSGT00940000158193 #23 ENSGT00940000158579.l.a ##35 ENSGT00940000163258.i.a #24 ENSGT00940000163845.c #33 ENSGT00940000163258.i.b #32 ENSGT00940000158579.l.b.b.b #37 ENSGT00940000163258.j ##24 ENSGT00940000158579.l.b.b.a #35 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 Hominoidea ANCESTRAL SPECIES 26 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT00390000018577 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b #22 ENSGT00950000182895.a.a.a.b.f ##22 ENSGT00940000158193 #23 ENSGT00940000158579.l.a ##35 ENSGT00940000163258.i.a.a #24 ENSGT00940000163527.c.a #25 ENSGT00940000163527.d #27 ENSGT00960000187213 #28 ENSGT00940000165026 #29 ENSGT00940000164049.b.a #31 ENSGT00940000163258.i.b #32 ENSGT00940000158579.l.b.a ##35 ENSGT00940000163845.d #30 ENSGT00940000158579.l.b.b.a #35 ENSGT00940000163845.c #33 ENSGT00940000163258.i.a.b ##24 Hominidae ANCESTRAL SPECIES 25 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT00390000018577 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b #22 ENSGT00940000158193 #23 ENSGT00940000163258.i.a.a #24 ENSGT00940000163527.c.a #25 ENSGT00940000163527.d #27 ENSGT00960000187213 #28 ENSGT00940000165026.b #29 ENSGT00940000163845.d #30 ENSGT00940000164049.b.a #31 ENSGT00940000163258.i.b #32 ENSGT00940000163845.c #33 ENSGT00940000164049.b.b #34 ENSGT00940000158579.l.b.b.a.c #35 ENSGT00940000158579.l.b.a ##35 ENSGT00940000163258.i.a.b ##24 ENSGT00940000158579.l.b.b.b #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES 27 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709.e.a ##19 ENSGT00390000018577 ENSGT00390000015709.f #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b #22 ENSGT00940000158193 #23 ENSGT00940000163258.i.a.a #24 ENSGT00940000163527.c.a #25 ENSGT00940000163527.d #27 ENSGT00960000187213 #28 ENSGT00940000165026.b #29 ENSGT00940000164049.b.a #31 ENSGT00940000163258.i.b #32 ENSGT00940000158579.l.b.a ##35 ENSGT00940000163845.d #30 ENSGT00940000164049.b.b #34 ENSGT00940000158579.l.b.b.a.c #35 ENSGT00940000163845.c #33 ENSGT00940000163258.i.a.b ##24 ENSGT00940000158579.l.b.b.b #37 Homo/Pan group ANCESTRAL SPECIES 26 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709.e.a ##19 ENSGT00390000018577 ENSGT00390000015709.f #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b #22 ENSGT00940000158193 #23 ENSGT00940000163258.i.a.a #24 ENSGT00940000163527.c.a #25 ENSGT00940000163527.d #27 ENSGT00960000187213 #28 ENSGT00940000165026.b #29 ENSGT00940000163845.d #30 ENSGT00940000158579.l.b.a ##35 ENSGT00940000164049.b.a #31 ENSGT00940000163258.i.b #32 ENSGT00940000163845.c #33 ENSGT00940000164049.b.b #34 ENSGT00940000158579.l.b.b.a.c #35 ENSGT00940000158579.l.a ##35 ENSGT00510000047718 Human MODERN SPECIES 13 YBEY (ENSG00000182362) #7 MCM3AP (ENSG00000160294) #8 LSS (ENSG00000160285) #9 SPATC1L (ENSG00000160284) #10 FTCD (ENSG00000160282) #11 COL6A2 (ENSG00000142173) #12 COL6A1 (ENSG00000142156) #13 PCBP3 (ENSG00000183570) #14 SLC19A1 (ENSG00000173638) #15 COL18A1 (ENSG00000182871) #16 POFUT2 (ENSG00000186866) #17 ADARB1 (ENSG00000197381) #18 SLX9 (ENSG00000160256) #19 ITGB2 (ENSG00000160255) #20 PTTG1IP (ENSG00000183255) #21 SUMO3 (ENSG00000184900) #22 UBE2G2 (ENSG00000184787) #23 KRTAP10-12 (ENSG00000189169) #24 KRTAP12-1 (ENSG00000187175) #25 KRTAP12-2 (ENSG00000221864) #26 KRTAP12-3 (ENSG00000205439) #27 KRTAP12-4 (ENSG00000212933) #28 KRTAP10-11 (ENSG00000243489) #29 KRTAP10-10 (ENSG00000221859) #30 KRTAP10-9 (ENSG00000221837) #31 KRTAP10-8 (ENSG00000187766) #32 KRTAP10-7 (ENSG00000272804) #33 KRTAP10-6 (ENSG00000188155) #34 KRTAP10-5 (ENSG00000241123) #35 KRTAP10-4 (ENSG00000215454) #36 KRTAP10-3 (ENSG00000212935) #37 Pan ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.b #22 Chimpanzee MODERN SPECIES OR2L5 (ENSPTRG00000046010) OR2L2 (ENSPTRG00000045276) OR2L3 (ENSPTRG00000050733) ENSPTRG00000030067 OR2L13 (ENSPTRG00000002215) ENSPTRG00000049161 OR2M5 (ENSPTRG00000046995) OR2M3 (ENSPTRG00000047719) OR2M4 (ENSPTRG00000002217) OR2M7 (ENSPTRG00000042776) OR14C36 (ENSPTRG00000002220) ENSPTRG00000049402 OR2T4 (ENSPTRG00000030061) OR2T6 (ENSPTRG00000030060) OR2G6 (ENSPTRG00000022806) ENSPTRG00000049162 #22 ENSPTRG00000023676 ENSPTRG00000029601 OR2T11 (ENSPTRG00000002223) OR14I1 (ENSPTRG00000023522) ENSPTRG00000048448 LYPD8 (ENSPTRG00000047488) SH3BP5L (ENSPTRG00000002224) ZNF672 (ENSPTRG00000002225) ZNF692 (ENSPTRG00000002226) PGBD2 (ENSPTRG00000002227) Bonobo MODERN SPECIES OR2L5 (ENSPPAG00000015628) OR2L2 (ENSPPAG00000034170) ENSPPAG00000007166 OR2L13 (ENSPPAG00000000427) ENSPPAG00000005253 OR2M3 (ENSPPAG00000017240) OR2M4 (ENSPPAG00000022132) OR2T12 (ENSPPAG00000030447) OR2M7 (ENSPPAG00000003964) ENSPPAG00000015154 OR2T4 (ENSPPAG00000009000) OR2T6 (ENSPPAG00000034554) OR2T1 (ENSPPAG00000008680) OR2T11 (ENSPPAG00000001140) ENSPPAG00000034158 ENSPPAG00000003421 #22 ENSPPAG00000035880 Cercopithecidae ANCESTRAL SPECIES 28 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b #22 ENSGT00940000158193 #23 ENSGT00940000158579.l.a ##35 ENSGT00940000163258.j ##24 ENSGT00940000158579.l.b.b.b #37 ENSGT00940000163258.i.b #32 ENSGT00940000163845.c #33 ENSGT00940000158579.l.b.b.a.e #35 ENSGT00940000158579.l.b.b.a.f #35 ENSGT00940000158579.l.b.a ##35 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 Rhinopithecus ANCESTRAL SPECIES 210 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162768.B ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b #22 ENSGT00940000158193 #23 ENSGT00940000158579.l.a ##35 ENSGT00940000163258.j ##24 ENSGT00940000158579.l.b.b.b #37 Golden snub-nosed monkey MODERN SPECIES 864 ITGB2 (ENSRROG00000044361) #20 PTTG1IP (ENSRROG00000039905) #21 ENSRROG00000029146 ENSRROG00000045338 #22 UBE2G2 (ENSRROG00000029493) #23 ENSRROG00000029984 #34 ENSRROG00000014285 #25 ENSRROG00000039336 KRTAP10-10 (ENSRROG00000045098) #30 ENSRROG00000029893 #24 KRTAP10-8 (ENSRROG00000030367) #32 ENSRROG00000039236 ##35 ENSRROG00000036053 #35 ENSRROG00000034471 ##35 KRTAP10-3 (ENSRROG00000018457) #37 TSPEAR (ENSRROG00000041561) LRRC3 (ENSRROG00000033768) TRPM2 (ENSRROG00000033191) CFAP410 (ENSRROG00000045512) Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 924 COL6A2 (ENSRBIG00000038516) #12 COL6A1 (ENSRBIG00000044937) #13 ENSRBIG00000028177 SLC19A1 (ENSRBIG00000042544) #15 COL18A1 (ENSRBIG00000030037) #16 POFUT2 (ENSRBIG00000037445) #17 ADARB1 (ENSRBIG00000033033) #18 SLX9 (ENSRBIG00000035044) #19 ITGB2 (ENSRBIG00000031250) #20 PTTG1IP (ENSRBIG00000036920) #21 SUMO3 (ENSRBIG00000031989) #22 UBE2G2 (ENSRBIG00000026486) #23 TSPEAR (ENSRBIG00000032685) ENSRBIG00000018796 ##35 ENSRBIG00000030166 #25 ENSRBIG00000036000 #37 ENSRBIG00000043765 ENSRBIG00000040008 #35 ENSRBIG00000029901 ##35 ENSRBIG00000039496 #37 KRTAP10-2 (ENSRBIG00000029279) ##24 ENSRBIG00000013411 ##35 LRRC3 (ENSRBIG00000013619) TRPM2 (ENSRBIG00000042457) CFAP410 (ENSRBIG00000036434) PFKL (ENSRBIG00000024591) Black snub-nosed monkey MODERN SPECIES 2888 ENSRBIG00000033331 #22 Cercopithecinae ANCESTRAL SPECIES 23 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00900000140979.a.a.`b.a.o.a ENSGT00390000003873 ENSGT00910000147401 ENSGT00950000182836.b.b.b.a Vervet Monkey DUPLICATION Vervet Monkey MODERN SPECIES 17 EDEM3 (ENSCSAG00000012843) NIBAN1 (ENSCSAG00000012855) RNF2 (ENSCSAG00000012868) TRMT1L (ENSCSAG00000012880) SWT1 (ENSCSAG00000012895) IVNS1ABP (ENSCSAG00000012909) ENSCSAG00000000246 HMCN1 (ENSCSAG00000013167) PRG4 (ENSCSAG00000013272) TPR (ENSCSAG00000013292) ODR4 (ENSCSAG00000013300) PDC (ENSCSAG00000013308) PTGS2 (ENSCSAG00000013318) PLA2G4A (ENSCSAG00000013326) ENSCSAG00000013330 ENSCSAG00000000247 #22 BRINP3 (ENSCSAG00000013346) RGS18 (ENSCSAG00000013348) RGS21 (ENSCSAG00000013355) RGS1 (ENSCSAG00000013361) RGS13 (ENSCSAG00000013367) RGS2 (ENSCSAG00000013370) ENSCSAG00000013381 UCHL5 (ENSCSAG00000013393) RO60 (ENSCSAG00000013402) GLRX2 (ENSCSAG00000013413) B3GALT2 (ENSCSAG00000000248) CDC73 (ENSCSAG00000013431) KCNT2 (ENSCSAG00000013529) CFH (ENSCSAG00000013551) CFHR4 (ENSCSAG00000013559) Vervet Monkey MODERN SPECIES 11 FTCD (ENSCSAG00000007233) #11 COL6A2 (ENSCSAG00000007240) #12 ENSCSAG00000007389 ENSCSAG00000007424 ENSCSAG00000007430 ENSCSAG00000007440 SLC19A1 (ENSCSAG00000007456) #15 ENSCSAG00000007471 POFUT2 (ENSCSAG00000007479) #17 ADARB1 (ENSCSAG00000007489) #18 ENSCSAG00000007491 ENSCSAG00000000274 SLX9 (ENSCSAG00000007496) #19 ITGB2 (ENSCSAG00000007501) #20 PTTG1IP (ENSCSAG00000007510) #21 ENSCSAG00000007518 #22 UBE2G2 (ENSCSAG00000007533) #23 ENSCSAG00000007540 #25 KRTAP12-3 (ENSCSAG00000000275) #27 KRTAP12-4 (ENSCSAG00000000276) #28 KRTAP10-8 (ENSCSAG00000007546) #32 KRTAP10-4 (ENSCSAG00000007551) #29 KRTAP10-3 (ENSCSAG00000007561) #37 ENSCSAG00000007568 ##35 TSPEAR (ENSCSAG00000007591) LRRC3 (ENSCSAG00000000277) TRPM2 (ENSCSAG00000007727) CFAP410 (ENSCSAG00000007805) PFKL (ENSCSAG00000007817) AIRE (ENSCSAG00000007836) DNMT3L (ENSCSAG00000007863) Cercopithecinae_a DUPLICATION Cercopithecinae_a DUPLICATION Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.b.e.a #22 Macaca ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.b.e.a #22 Macaca_a ANCESTRAL SPECIES 15 ENSGT00940000154864.b ENSGT00940000155564 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a ENSGT00390000014001.a ENSGT00940000164709.a.b.b.a.a.b.a.a.a.a.a.a.a.b.b ENSGT00940000157837 ENSGT00940000157361 ENSGT01100000263543.a.g.a.a.a.a ENSGT00950000182895.a.b.j.b.e.a #22 ENSGT00940000158042 ENSGT00390000005537 ENSGT01100000263539.b.a.a.a.b.b.b.a.b.b.a.a.b ENSGT00940000156983.a.a ENSGT00940000156467 ENSGT01100000263493.a.b.a.a.a.a.a.a.a.a.a.a.a.a.a.a ENSGT00940000158732 ENSGT00390000018318.u.b.a.b.a.a.a ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B Crab-eating macaque MODERN SPECIES 4 ENSMFAG00000055004 CLHC1 (ENSMFAG00000039539) ENSMFAG00000037923 MTIF2 (ENSMFAG00000044949) ENSMFAG00000043775 ENSMFAG00000055613 CCDC88A (ENSMFAG00000037041) CFAP36 (ENSMFAG00000010897) PPP4R3B (ENSMFAG00000037701) PNPT1 (ENSMFAG00000001927) ENSMFAG00000058693 EFEMP1 (ENSMFAG00000044235) CCDC85A (ENSMFAG00000044378) ENSMFAG00000061252 ENSMFAG00000048944 SUMO3 (ENSMFAG00000009821) #22 VRK2 (ENSMFAG00000031394) FANCL (ENSMFAG00000042101) ENSMFAG00000057303 ENSMFAG00000050088 BCL11A (ENSMFAG00000016402) ENSMFAG00000047975 ENSMFAG00000044508 ENSMFAG00000052777 PAPOLG (ENSMFAG00000042450) ENSMFAG00000056134 REL (ENSMFAG00000038696) ENSMFAG00000064635 PUS10 (ENSMFAG00000000611) PEX13 (ENSMFAG00000042959) SANBR (ENSMFAG00000007392) Rhesus MODERN SPECIES 4 EML6 (ENSMMUG00000021296) RTN4 (ENSMMUG00000021299) CLHC1 (ENSMMUG00000011346) RPS27A (ENSMMUG00000015563) MTIF2 (ENSMMUG00000030833) ENSMMUG00000019075 CCDC88A (ENSMMUG00000003003) CFAP36 (ENSMMUG00000007000) PPP4R3B (ENSMMUG00000007001) PNPT1 (ENSMMUG00000007003) ENSMMUG00000060312 EFEMP1 (ENSMMUG00000016872) ENSMMUG00000056218 CCDC85A (ENSMMUG00000015888) ENSMMUG00000064261 ENSMMUG00000002024 #22 VRK2 (ENSMMUG00000002025) ENSMMUG00000064756 FANCL (ENSMMUG00000002026) ENSMMUG00000060918 BCL11A (ENSMMUG00000011303) PAPOLG (ENSMMUG00000000498) ENSMMUG00000057135 REL (ENSMMUG00000010834) ENSMMUG00000055963 PUS10 (ENSMMUG00000005685) ENSMMUG00000052940 PEX13 (ENSMMUG00000005687) SANBR (ENSMMUG00000021990) C13H2orf74 (ENSMMUG00000041555) AHSA2 (ENSMMUG00000008097) Cercopithecinae_b ANCESTRAL SPECIES 15 ENSGT00390000011103.A ENSGT00390000005045 ENSGT00940000154864.b ENSGT00940000155564 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a ENSGT00390000014001.a.b ENSGT00940000157837 ENSGT00940000157361 ENSGT00950000182895.a.b.j.b.e.a #22 ENSGT00940000158042 ENSGT00390000005537 ENSGT00530000063174.a.i.f ENSGT00940000156983.a.a ENSGT01030000234579.A.b.w ENSGT00390000008802.m.a.a ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000155413.l.a.b Olive baboon MODERN SPECIES 5 EML6 (ENSPANG00000004287) RTN4 (ENSPANG00000005683) CLHC1 (ENSPANG00000016915) RPS27A (ENSPANG00000034863) MTIF2 (ENSPANG00000014549) ENSPANG00000000623 CCDC88A (ENSPANG00000021274) PPP4R3B (ENSPANG00000022844) CFAP36 (ENSPANG00000022522) ENSPANG00000038384 ENSPANG00000031278 EFEMP1 (ENSPANG00000022521) ENSPANG00000041504 ENSPANG00000043733 CCDC85A (ENSPANG00000016914) ENSPANG00000010717 #22 VRK2 (ENSPANG00000014544) FANCL (ENSPANG00000021497) ENSPANG00000021826 BCL11A (ENSPANG00000018170) ENSPANG00000000672 PAPOLG (ENSPANG00000014543) REL (ENSPANG00000006148) PUS10 (ENSPANG00000018036) PEX13 (ENSPANG00000022181) ENSPANG00000017323 ENSPANG00000039323 C2orf74 (ENSPANG00000035894) ENSPANG00000016913 USP34 (ENSPANG00000025375) XPO1 (ENSPANG00000006892) Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.b.e.b #22 Macaca ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.b.e.b #22 Macaca_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.b.e.b #22 Rhesus MODERN SPECIES 13 ENSMMUG00000064313 SPATC1L (ENSMMUG00000058335) #10 FTCD (ENSMMUG00000022324) #11 COL6A2 (ENSMMUG00000022317) #12 ENSMMUG00000055486 COL6A1 (ENSMMUG00000000544) #13 PCBP3 (ENSMMUG00000003825) #14 SLC19A1 (ENSMMUG00000004477) #15 COL18A1 (ENSMMUG00000004472) #16 POFUT2 (ENSMMUG00000010700) #17 ADARB1 (ENSMMUG00000010695) #18 ENSMMUG00000061023 SLX9 (ENSMMUG00000000953) #19 ITGB2 (ENSMMUG00000000951) #20 PTTG1IP (ENSMMUG00000046352) #21 SUMO3 (ENSMMUG00000048545) #22 UBE2G2 (ENSMMUG00000045077) #23 TSPEAR (ENSMMUG00000022556) ENSMMUG00000022561 #25 KRTAP10-9 (ENSMMUG00000043221) #31 KRTAP10-8 (ENSMMUG00000048049) #32 ENSMMUG00000030497 ##35 ENSMMUG00000022558 #35 KRTAP10-10 (ENSMMUG00000022559) #30 LRRC3 (ENSMMUG00000049755) TRPM2 (ENSMMUG00000004175) CFAP410 (ENSMMUG00000049578) PFKL (ENSMMUG00000004173) AIRE (ENSMMUG00000004168) DNMT3L (ENSMMUG00000010648) ICOSLG (ENSMMUG00000010647) Cercopithecinae_a ANCESTRAL SPECIES 22 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b.f #22 ENSGT00940000158193 #23 ENSGT00940000163527.c.d #25 ENSGT00940000163527.d #27 ENSGT00940000164049.b.a #31 ENSGT00940000163527.c.c #25 ENSGT00940000158579.l.b.b.b #37 ENSGT00940000163258.i.b #32 ENSGT00940000163845.c #33 ENSGT00940000158579.l.a ##35 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 Macaca ANCESTRAL SPECIES 3 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b.f #22 ENSGT00940000158193 #23 ENSGT00940000163527.c.d #25 ENSGT00940000164049.b.a #31 ENSGT00940000163258.i.b #32 ENSGT00940000163845.c #33 ENSGT00940000158579.l.b.a ##35 ENSGT00510000047718 ENSGT00940000158579.l.b.b.a.e #35 ENSGT00940000158579.l.a ##35 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 Macaca_a ANCESTRAL SPECIES 22 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000163601 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b.f #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000163527.c.d #25 ENSGT00940000164049.b.a #31 ENSGT00940000163258.i.b #32 ENSGT00940000158579.l.b.a ##35 ENSGT00940000158579.l.b.b.a.e #35 ENSGT00940000163845.d #30 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 Crab-eating macaque MODERN SPECIES 13 MCM3AP (ENSMFAG00000041104) #8 LSS (ENSMFAG00000034060) #9 SPATC1L (ENSMFAG00000031624) #10 FTCD (ENSMFAG00000039806) #11 ENSMFAG00000060948 ENSMFAG00000003504 PCBP3 (ENSMFAG00000034574) #14 ENSMFAG00000053223 ENSMFAG00000056786 SLC19A1 (ENSMFAG00000041513) #15 ENSMFAG00000003616 #17 ADARB1 (ENSMFAG00000011312) #18 SLX9 (ENSMFAG00000037615) #19 ITGB2 (ENSMFAG00000036141) #20 PTTG1IP (ENSMFAG00000033191) #21 ENSMFAG00000032355 #22 UBE2G2 (ENSMFAG00000057431) #23 TSPEAR (ENSMFAG00000001348) KRTAP10-7 (ENSMFAG00000051280) #33 KRTAP10-9 (ENSMFAG00000053657) #31 KRTAP10-4 (ENSMFAG00000031679) #29 LRRC3 (ENSMFAG00000028969) TRPM2 (ENSMFAG00000001773) CFAP410 (ENSMFAG00000049270) PFKL (ENSMFAG00000037062) AIRE (ENSMFAG00000001488) DNMT3L (ENSMFAG00000046145) ICOSLG (ENSMFAG00000040533) GATD3 (ENSMFAG00000046334) PWP2 (ENSMFAG00000044448) TRAPPC10 (ENSMFAG00000041704) Cercopithecinae_b ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.b.f #22 Cercopithecinae_d ANCESTRAL SPECIES 188 ENSGT00950000182895.a.b.j.b.f #22 ENSGT00940000156099 ENSGT00940000161034 ENSGT00940000161004 ENSGT00940000157316 ENSGT00940000158520 ENSGT00940000157937 ENSGT00910000148155 ENSGT00940000155195 ENSGT00390000006200 ENSGT00940000162420 ENSGT00390000001114 ENSGT00940000155117.f.a ENSGT00940000158746.b ENSGT00910000148101 ENSGT00940000163274.d Sooty mangabey MODERN SPECIES 167 ENSCATG00000036885 ENSCATG00000030122 #22 BRINP3 (ENSCATG00000015477) RGS18 (ENSCATG00000036533) RGS21 (ENSCATG00000030362) RGS1 (ENSCATG00000031319) RGS13 (ENSCATG00000040203) RGS2 (ENSCATG00000037692) ENSCATG00000016891 UCHL5 (ENSCATG00000035323) RO60 (ENSCATG00000027732) GLRX2 (ENSCATG00000018043) B3GALT2 (ENSCATG00000015456) CDC73 (ENSCATG00000041073) ENSCATG00000039300 KCNT2 (ENSCATG00000036589) ENSCATG00000033803 Drill MODERN SPECIES 1156 ENSMLEG00000029614 ENSMLEG00000036410 #22 BRINP3 (ENSMLEG00000035514) RGS18 (ENSMLEG00000033035) RGS21 (ENSMLEG00000033245) RGS1 (ENSMLEG00000034600) RGS13 (ENSMLEG00000042866) RGS2 (ENSMLEG00000031978) ENSMLEG00000027624 UCHL5 (ENSMLEG00000030039) RO60 (ENSMLEG00000040042) GLRX2 (ENSMLEG00000036985) CDC73 (ENSMLEG00000035219) B3GALT2 (ENSMLEG00000004708) Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.a ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.a ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.a ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.a ##22 Cercopithecinae_b ANCESTRAL SPECIES 29 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.a.a ##22 ENSGT00940000158193 #23 ENSGT00940000163527.c.d #25 ENSGT00940000163527.d #27 ENSGT00940000163527.c.c #25 ENSGT00940000158579.l.b.b.b #37 ENSGT00940000163258.i.b #32 ENSGT00940000163845.c #33 ENSGT00940000158579.l.b.b.a.e #35 ENSGT00940000158579.l.b.b.a.f #35 ENSGT00940000158579.l.b.a ##35 ENSGT00940000158579.l.a ##35 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 Cercopithecinae_d ANCESTRAL SPECIES 36 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.a.a ##22 ENSGT00940000158193 #23 ENSGT00940000158579.l.a ##35 ENSGT00940000163527.c.d #25 ENSGT00940000163527.c.c #25 ENSGT00940000158579.l.b.b.b #37 ENSGT00940000163258.i.b #32 ENSGT00940000163845.c #33 ENSGT00940000158579.l.b.b.a.e #35 ENSGT00940000158579.l.b.b.a.f #35 ENSGT00940000158579.l.b.a ##35 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 Drill MODERN SPECIES 1420 SLC19A1 (ENSMLEG00000032396) #15 COL18A1 (ENSMLEG00000042137) #16 POFUT2 (ENSMLEG00000039268) #17 ADARB1 (ENSMLEG00000033846) #18 SLX9 (ENSMLEG00000042676) #19 ITGB2 (ENSMLEG00000037129) #20 PTTG1IP (ENSMLEG00000033830) #21 ENSMLEG00000041321 ##22 UBE2G2 (ENSMLEG00000032164) #23 ENSMLEG00000006261 ##35 ENSMLEG00000033801 ENSMLEG00000038049 #25 ENSMLEG00000023838 #25 ENSMLEG00000031813 #37 KRTAP10-7 (ENSMLEG00000038502) #33 ENSMLEG00000041386 #35 ENSMLEG00000038480 #35 ENSMLEG00000034784 ##35 TSPEAR (ENSMLEG00000035979) ENSMLEG00000031061 #24 ENSMLEG00000040298 ##31 LRRC3 (ENSMLEG00000001984) TRPM2 (ENSMLEG00000009280) Catarrhini ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.b ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.b ##22 Rhinopithecus ANCESTRAL SPECIES 24 ENSGT00390000007870 ENSGT00940000157800 ENSGT00940000165228 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902.c ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.j.a.b ##22 ENSGT00940000164037 ENSGT00510000055459 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00910000147493 ENSGT00940000158336 ENSGT00390000003582.e.c ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00390000013574 Golden snub-nosed monkey MODERN SPECIES 2632 SAP30BP (ENSRROG00000041616) RECQL5 (ENSRROG00000043301) SMIM6 (ENSRROG00000006702) SMIM5 (ENSRROG00000041071) MYO15B (ENSRROG00000044616) LLGL2 (ENSRROG00000044594) TSEN54 (ENSRROG00000030797) CASKIN2 (ENSRROG00000033523) TMEM94 (ENSRROG00000035918) GRB2 (ENSRROG00000040617) ENSRROG00000028519 MIF4GD (ENSRROG00000033599) MRPS7 (ENSRROG00000028554) GGA3 (ENSRROG00000034700) NUP85 (ENSRROG00000034070) ENSRROG00000033666 ##22 ENSRROG00000031610 ENSRROG00000030020 NT5C (ENSRROG00000033470) ARMC7 (ENSRROG00000014155) SLC16A5 (ENSRROG00000045514) KCTD2 (ENSRROG00000044059) ATP5PD (ENSRROG00000041340) ENSRROG00000010716 CDR2L (ENSRROG00000043209) HID1 (ENSRROG00000029110) OTOP3 (ENSRROG00000033489) OTOP2 (ENSRROG00000026399) USH1G (ENSRROG00000031837) FDXR (ENSRROG00000041952) GRIN2C (ENSRROG00000039210) Cercopithecinae ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.b ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.b ##22 Cercopithecinae_b ANCESTRAL SPECIES 19 ENSGT00390000007870 ENSGT00940000157800 ENSGT00940000165228 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.j.a.b ##22 ENSGT00950000182895.a.a.a.a.a.a.a ##22 ENSGT00940000164037 ENSGT00510000055459 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000158336.y ENSGT00390000003582.e.c.c.a.b ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00950000182990.b Cercopithecinae_d ANCESTRAL SPECIES 15 ENSGT00390000007870 ENSGT00940000157800 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT01100000263915.D ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.j.a.b ##22 ENSGT00950000182895.a.a.a.a.a.a.a ##22 ENSGT00940000164037 ENSGT00510000055459 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000158336.y ENSGT00390000003582.e.c.c.a.b ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00950000182990.b Drill MODERN SPECIES 65 SAP30BP (ENSMLEG00000029210) SMIM5 (ENSMLEG00000030911) RECQL5 (ENSMLEG00000033070) ENSMLEG00000043467 LLGL2 (ENSMLEG00000038952) TSEN54 (ENSMLEG00000044168) CASKIN2 (ENSMLEG00000028492) TMEM94 (ENSMLEG00000040372) GRB2 (ENSMLEG00000033030) ENSMLEG00000024923 SLC25A19 (ENSMLEG00000040542) MIF4GD (ENSMLEG00000031604) MRPS7 (ENSMLEG00000032202) GGA3 (ENSMLEG00000040759) NUP85 (ENSMLEG00000036306) ENSMLEG00000032713 ##22 ENSMLEG00000037373 ENSMLEG00000028530 NT5C (ENSMLEG00000032500) SLC16A5 (ENSMLEG00000029978) ENSMLEG00000043153 ENSMLEG00000029365 ENSMLEG00000026116 CDR2L (ENSMLEG00000039727) HID1 (ENSMLEG00000034321) OTOP3 (ENSMLEG00000031468) OTOP2 (ENSMLEG00000032852) USH1G (ENSMLEG00000031673) ENSMLEG00000043118 FDXR (ENSMLEG00000042243) GRIN2C (ENSMLEG00000037748) Hominoidea ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.b ##22 Hominidae ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.b ##22 Orangutan MODERN SPECIES 12 MCM3AP (ENSPPYG00000011532) #8 LSS (ENSPPYG00000011530) #9 SPATC1L (ENSPPYG00000011529) #10 FTCD (ENSPPYG00000011528) #11 COL6A2 (ENSPPYG00000011527) #12 COL6A1 (ENSPPYG00000034634) #13 PCBP3 (ENSPPYG00000011525) #14 SLC19A1 (ENSPPYG00000011523) #15 ENSPPYG00000011521 #16 POFUT2 (ENSPPYG00000011516) #17 ADARB1 (ENSPPYG00000011514) #18 SLX9 (ENSPPYG00000011509) #19 ENSPPYG00000031942 ITGB2 (ENSPPYG00000011506) #20 PTTG1IP (ENSPPYG00000036754) #21 ENSPPYG00000011503 ##22 UBE2G2 (ENSPPYG00000035359) #23 KRTAP10-12 (ENSPPYG00000011501) #24 ENSPPYG00000033473 KRTAP12-3 (ENSPPYG00000011499) #27 KRTAP10-11 (ENSPPYG00000011497) #29 KRTAP10-10 (ENSPPYG00000011496) #30 KRTAP10-9 (ENSPPYG00000011495) #31 KRTAP10-8 (ENSPPYG00000011494) #32 KRTAP10-7 (ENSPPYG00000011493) #33 ENSPPYG00000038597 #34 KRTAP10-5 (ENSPPYG00000011492) #35 ENSPPYG00000039780 ##35 KRTAP10-3 (ENSPPYG00000037806) #37 TSPEAR (ENSPPYG00000011488) LRRC3 (ENSPPYG00000011486) Platyrrhini ANCESTRAL SPECIES 31 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000158579.l.b.b.a.a.b #35 ENSGT00940000158579.l.b.a ##35 ENSGT00940000163845.d #30 ENSGT00510000047718 ENSGT00940000158579.l.b.b.a.b #35 ENSGT00940000163845.c #33 ENSGT00940000163258.i.b #32 ENSGT00940000158579.l.a ##35 ENSGT00940000158579.k ##35 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 Cebidae ANCESTRAL SPECIES 32 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000158579.l.b.b.a.a.b #35 ENSGT00940000158579.l.b.a ##35 ENSGT00510000047718 ENSGT00940000158579.l.b.b.a.b #35 ENSGT00940000163845.c #33 ENSGT00940000163258.i.b #32 ENSGT00940000158579.l.a ##35 ENSGT00940000158579.k ##35 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 Marmoset MODERN SPECIES 13 LSS (ENSCJAG00000086602) #9 SPATC1L (ENSCJAG00000085076) #10 FTCD (ENSCJAG00000080609) #11 COL6A2 (ENSCJAG00000001863) #12 COL6A1 (ENSCJAG00000078346) #13 PCBP3 (ENSCJAG00000077507) #14 SLC19A1 (ENSCJAG00000001943) #15 ENSCJAG00000081985 COL18A1 (ENSCJAG00000083421) #16 ENSCJAG00000081850 #17 ADARB1 (ENSCJAG00000018646) #18 ENSCJAG00000071675 SLX9 (ENSCJAG00000010599) #19 ITGB2 (ENSCJAG00000010554) #20 PTTG1IP (ENSCJAG00000085899) #21 SUMO3 (ENSCJAG00000010529) #22 UBE2G2 (ENSCJAG00000041224) #23 ENSCJAG00000063198 #33 ENSCJAG00000000301 #34 ENSCJAG00000000296 #35 ENSCJAG00000052337 ##35 ENSCJAG00000047635 #29 ENSCJAG00000041374 #29 KRTAP10-3 (ENSCJAG00000077838) #37 ENSCJAG00000046358 ##35 TSPEAR (ENSCJAG00000015329) LRRC3 (ENSCJAG00000081918) TRPM2 (ENSCJAG00000073600) CFAP410 (ENSCJAG00000017611) PFKL (ENSCJAG00000017630) AIRE (ENSCJAG00000013748) Cebidae_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.j #22 Bolivian squirrel monkey MODERN SPECIES 57 SLC38A9 (ENSSBOG00000026976) PLPP1 (ENSSBOG00000021185) MTREX (ENSSBOG00000026693) DHX29 (ENSSBOG00000026450) CCNO (ENSSBOG00000024858) MCIDAS (ENSSBOG00000027678) CDC20B (ENSSBOG00000021532) GPX8 (ENSSBOG00000033612) GZMA (ENSSBOG00000031268) ENSSBOG00000032720 GZMK (ENSSBOG00000023762) ESM1 (ENSSBOG00000026605) SNX18 (ENSSBOG00000021385) HSPB3 (ENSSBOG00000019511) ARL15 (ENSSBOG00000031209) ENSSBOG00000035211 #22 ENSSBOG00000035792 NDUFS4 (ENSSBOG00000014595) ENSSBOG00000020828 FST (ENSSBOG00000024064) ENSSBOG00000012144 MOCS2 (ENSSBOG00000023924) ITGA2 (ENSSBOG00000026323) ITGA1 (ENSSBOG00000035784) ENSSBOG00000005354 PELO (ENSSBOG00000036140) ISL1 (ENSSBOG00000029572) PARP8 (ENSSBOG00000026196) ENSSBOG00000022889 EMB (ENSSBOG00000031770) HCN1 (ENSSBOG00000032652) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1115 AKT3 (ENSANAG00000031454) ZBTB18 (ENSANAG00000037877) C1orf100 (ENSANAG00000029438) ENSANAG00000033603 CATSPERE (ENSANAG00000038006) DESI2 (ENSANAG00000036524) ENSANAG00000028263 ENSANAG00000029422 ENSANAG00000033895 EFCAB2 (ENSANAG00000033282) KIF26B (ENSANAG00000030464) SMYD3 (ENSANAG00000032109) ENSANAG00000037652 TFB2M (ENSANAG00000038040) CNST (ENSANAG00000022435) ENSANAG00000035995 #22 SCCPDH (ENSANAG00000017200) AHCTF1 (ENSANAG00000027717) Mas night monkey MODERN SPECIES 1376 ENSANAG00000034097 #15 COL18A1 (ENSANAG00000036428) #16 POFUT2 (ENSANAG00000022544) #17 ADARB1 (ENSANAG00000023685) #18 SLX9 (ENSANAG00000031930) #19 ITGB2 (ENSANAG00000032805) #20 PTTG1IP (ENSANAG00000031724) #21 ENSANAG00000032700 #22 UBE2G2 (ENSANAG00000035084) #23 ENSANAG00000030182 #37 ENSANAG00000030273 #35 KRTAP12-3 (ENSANAG00000026810) #27 ENSANAG00000027010 ENSANAG00000027667 #34 ENSANAG00000028487 ##35 ENSANAG00000032475 #30 TSPEAR (ENSANAG00000032724) TRPM2 (ENSANAG00000034661) CFAP410 (ENSANAG00000021390) PFKL (ENSANAG00000022126) AIRE (ENSANAG00000031045) DNMT3L (ENSANAG00000027897) ENSANAG00000031721 Tarsier MODERN SPECIES 7124 LLGL2 (ENSTSYG00000027056) TSEN54 (ENSTSYG00000037439) CASKIN2 (ENSTSYG00000026592) TMEM94 (ENSTSYG00000033397) GRB2 (ENSTSYG00000031708) SLC25A19 (ENSTSYG00000010346) MIF4GD (ENSTSYG00000025585) MRPS7 (ENSTSYG00000009380) GGA3 (ENSTSYG00000010581) NUP85 (ENSTSYG00000010481) ENSTSYG00000035255 #22 ENSTSYG00000003938 ENSTSYG00000030661 ARMC7 (ENSTSYG00000012602) SLC16A5 (ENSTSYG00000027596) ENSTSYG00000034337 ATP5H (ENSTSYG00000030194) MRPL58 (ENSTSYG00000013235) CDR2L (ENSTSYG00000029560) HID1 (ENSTSYG00000025635) OTOP3 (ENSTSYG00000037315) OTOP2 (ENSTSYG00000036808) USH1G (ENSTSYG00000026004) FADS6 (ENSTSYG00000000345) FDXR (ENSTSYG00000026975) Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163845 #30 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000163441.f.a.a.a ENSGT00940000163258 #24 ENSGT00940000158579 #35 ENSGT00940000163527 #25 ENSGT00940000164049 #31 ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 Bushbaby MODERN SPECIES 243 FTCD (ENSOGAG00000008226) #11 COL6A2 (ENSOGAG00000005077) #12 COL6A1 (ENSOGAG00000031247) #13 ENSOGAG00000024419 ENSOGAG00000008044 SLC19A1 (ENSOGAG00000032361) #15 COL18A1 (ENSOGAG00000000892) #16 ENSOGAG00000024946 POFUT2 (ENSOGAG00000017168) #17 ADARB1 (ENSOGAG00000017167) #18 ENSOGAG00000026126 ENSOGAG00000027833 SLX9 (ENSOGAG00000009641) #19 ITGB2 (ENSOGAG00000009633) #20 PTTG1IP (ENSOGAG00000005597) #21 SUMO3 (ENSOGAG00000004715) #22 ENSOGAG00000012063 #23 ENSOGAG00000033488 #30 ENSOGAG00000034456 #35 TSPEAR (ENSOGAG00000003682) LRRC3 (ENSOGAG00000013776) TRPM2 (ENSOGAG00000014398) CFAP410 (ENSOGAG00000003170) PFKL (ENSOGAG00000027753) AIRE (ENSOGAG00000010769) DNMT3L (ENSOGAG00000015368) ICOSLG (ENSOGAG00000015366) GATD3 (ENSOGAG00000012480) PWP2 (ENSOGAG00000012473) TRAPPC10 (ENSOGAG00000012463) AGPAT3 (ENSOGAG00000003775) Lemuriformes ANCESTRAL SPECIES 88 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 24 YBEY (ENSMICG00000000809) #7 MCM3AP (ENSMICG00000000801) #8 LSS (ENSMICG00000004051) #9 SPATC1L (ENSMICG00000027207) #10 FTCD (ENSMICG00000002458) #11 COL6A2 (ENSMICG00000033173) #12 ENSMICG00000033569 PCBP3 (ENSMICG00000012679) #14 SLC19A1 (ENSMICG00000035898) #15 COL18A1 (ENSMICG00000037125) #16 POFUT2 (ENSMICG00000035479) #17 ADARB1 (ENSMICG00000008433) #18 SLX9 (ENSMICG00000047718) #19 ITGB2 (ENSMICG00000002984) #20 PTTG1IP (ENSMICG00000028388) #21 SUMO3 (ENSMICG00000036688) #22 UBE2G2 (ENSMICG00000013001) #23 TFF2 (ENSMICG00000011183) TFF1 (ENSMICG00000045652) TMPRSS3 (ENSMICG00000005497) UBASH3A (ENSMICG00000000050) RSPH1 (ENSMICG00000000051) SLC37A1 (ENSMICG00000000053) PDE9A (ENSMICG00000016258) WDR4 (ENSMICG00000042106) NDUFV3 (ENSMICG00000046617) PKNOX1 (ENSMICG00000037878) CBS (ENSMICG00000041663) U2AF1 (ENSMICG00000013835) CRYAA (ENSMICG00000035380) ENSMICG00000035845 Mouse lemur MODERN SPECIES 30 TSN (ENSMICG00000015793) NIFK (ENSMICG00000037600) CLASP1 (ENSMICG00000007186) TFCP2L1 (ENSMICG00000007161) ENSMICG00000032165 ENSMICG00000033908 GLI2 (ENSMICG00000008885) INHBB (ENSMICG00000047510) RALB (ENSMICG00000012197) ENSMICG00000042089 ENSMICG00000009529 EPB41L5 (ENSMICG00000000936) PTPN4 (ENSMICG00000046058) ENSMICG00000017224 ENSMICG00000034038 ENSMICG00000011011 #22 CFAP221 (ENSMICG00000017212) SCTR (ENSMICG00000000297) TMEM37 (ENSMICG00000000295) DBI (ENSMICG00000026878) C2orf76 (ENSMICG00000037028) ENSMICG00000000288 ENSMICG00000033839 ENSMICG00000017595 EN1 (ENSMICG00000042501) INSIG2 (ENSMICG00000046615) CCDC93 (ENSMICG00000017592) ENSMICG00000017591 ENSMICG00000047072 ENSMICG00000039700 DPP10 (ENSMICG00000032720) Lemuriformes_a ANCESTRAL SPECIES 181 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b.s #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 768 ENSPCOG00000021907 ENSPCOG00000018632 #22 C9orf153 (ENSPCOG00000020594) ISCA1 (ENSPCOG00000021277) TUT7 (ENSPCOG00000023407) GAS1 (ENSPCOG00000025804) DAPK1 (ENSPCOG00000015755) ENSPCOG00000017521 FBP2 (ENSPCOG00000006489) CTSL (ENSPCOG00000020524) Coquerels sifaka MODERN SPECIES 134 NANS (ENSPCOG00000023626) TRIM14 (ENSPCOG00000017721) CORO2A (ENSPCOG00000021539) TBC1D2 (ENSPCOG00000024947) GABBR2 (ENSPCOG00000019740) ANKS6 (ENSPCOG00000019218) GALNT12 (ENSPCOG00000022046) COL15A1 (ENSPCOG00000007449) TGFBR1 (ENSPCOG00000021241) ALG2 (ENSPCOG00000014203) SEC61B (ENSPCOG00000021383) NR4A3 (ENSPCOG00000012688) STX17 (ENSPCOG00000019872) ERP44 (ENSPCOG00000027107) INVS (ENSPCOG00000024587) ENSPCOG00000022135 #22 TEX10 (ENSPCOG00000026793) MSANTD3 (ENSPCOG00000028663) TMEFF1 (ENSPCOG00000014294) CAVIN4 (ENSPCOG00000012594) ENSPCOG00000012244 ENSPCOG00000028150 PLPPR1 (ENSPCOG00000005256) BAAT (ENSPCOG00000015820) ZNF189 (ENSPCOG00000016670) ALDOB (ENSPCOG00000026694) PGAP4 (ENSPCOG00000014025) RNF20 (ENSPCOG00000026072) GRIN3A (ENSPCOG00000008500) Coquerels sifaka MODERN SPECIES 543 YBEY (ENSPCOG00000015606) #7 MCM3AP (ENSPCOG00000024498) #8 LSS (ENSPCOG00000019936) #9 SPATC1L (ENSPCOG00000025023) #10 FTCD (ENSPCOG00000021020) #11 COL6A2 (ENSPCOG00000016356) #12 COL6A1 (ENSPCOG00000014806) #13 PCBP3 (ENSPCOG00000013797) #14 SLC19A1 (ENSPCOG00000027927) #15 COL18A1 (ENSPCOG00000014698) #16 POFUT2 (ENSPCOG00000016074) #17 ADARB1 (ENSPCOG00000020406) #18 SLX9 (ENSPCOG00000020078) #19 ITGB2 (ENSPCOG00000014923) #20 PTTG1IP (ENSPCOG00000020581) #21 ENSPCOG00000019098 #22 UBE2G2 (ENSPCOG00000026083) #23 ENSPCOG00000013309 #24 Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 1314 ENSPSMG00000004175 #21 ENSPSMG00000004149 #22 UBE2G2 (ENSPSMG00000004073) #23 ENSPSMG00000004065 Greater bamboo lemur MODERN SPECIES 1310 ENSPSMG00000003996 #22 Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 ENSGT00940000163258 #24 ENSGT00940000163845 #30 ENSGT00940000158579 #35 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 Tree shrew MODERN SPECIES 6630 ENSTBEG00000007131 #22 Glires ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 ENSGT00940000163845 #30 ENSGT00940000158579 #35 ENSGT00940000163441.f.a.a.a ENSGT00940000163258 #24 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a Rodentia ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Rodentia_A ANCESTRAL SPECIES 5 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Sciuridae ANCESTRAL SPECIES 12 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989.h #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 14 IDO2 (ENSSVLG00005021403) IDO1 (ENSSVLG00005021549) ADAM18 (ENSSVLG00005021659) ENSSVLG00005021965 ENSSVLG00005022023 ADAM32 (ENSSVLG00005022276) ENSSVLG00005022608 ADAM9 (ENSSVLG00005010866) TM2D2 (ENSSVLG00005011108) HTRA4 (ENSSVLG00005011148) PLEKHA2 (ENSSVLG00005011303) TACC1 (ENSSVLG00005011491) FGFR1 (ENSSVLG00005011874) LETM2 (ENSSVLG00005012521) NSD3 (ENSSVLG00005013101) ENSSVLG00005013154 #22 PLPP5 (ENSSVLG00005013468) DDHD2 (ENSSVLG00005013607) BAG4 (ENSSVLG00005013686) LSM1 (ENSSVLG00005013791) STAR (ENSSVLG00005013903) ASH2L (ENSSVLG00005014040) EIF4EBP1 (ENSSVLG00005014183) ENSSVLG00005014228 ADRB3 (ENSSVLG00005014273) GOT1L1 (ENSSVLG00005014325) ENSSVLG00005014501 BRF2 (ENSSVLG00005014567) ADGRA2 (ENSSVLG00005014696) ENSSVLG00005014866 ENSSVLG00005014990 Eurasian red squirrel MODERN SPECIES 1 YBEY (ENSSVLG00005018192) #7 MCM3AP (ENSSVLG00005018327) #8 LSS (ENSSVLG00005018385) #9 SPATC1L (ENSSVLG00005019009) #10 ENSSVLG00005019107 #11 ENSSVLG00005019331 #11 COL6A2 (ENSSVLG00005019580) #12 COL6A1 (ENSSVLG00005019712) #13 PCBP3 (ENSSVLG00005019852) #14 SLC19A1 (ENSSVLG00005020132) #15 POFUT2 (ENSSVLG00005021705) #17 ADARB1 (ENSSVLG00005021761) #18 SLX9 (ENSSVLG00005021933) #19 ITGB2 (ENSSVLG00005022020) #20 ENSSVLG00005022355 #21 ENSSVLG00005022452 #22 UBE2G2 (ENSSVLG00005022482) #23 TSPEAR (ENSSVLG00005022529) ENSSVLG00005022624 #35 ENSSVLG00005022707 #35 ENSSVLG00005023080 #30 ENSSVLG00005023369 #24 LRRC3 (ENSSVLG00005023556) TRPM2 (ENSSVLG00005023598) CFAP410 (ENSSVLG00005023882) PFKL (ENSSVLG00005023925) AIRE (ENSSVLG00005023997) ENSSVLG00005024326 ICOSLG (ENSSVLG00005024369) GATD3 (ENSSVLG00005024474) PWP2 (ENSSVLG00005024557) Marmotini DUPLICATION Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES 36 ENSGT00390000007870 ENSGT00940000165228 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.j.n.a #22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000162951 ENSGT00940000158336 ENSGT00390000003582.e ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00950000182990.b ENSGT00390000013574 Marmotini_b ANCESTRAL SPECIES 182 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000163601 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989.h #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.n.a #22 ENSGT00940000158193 #23 ENSGT00510000047718 Squirrel DUPLICATION Squirrel MODERN SPECIES 378 YBEY (ENSSTOG00000029373) #7 MCM3AP (ENSSTOG00000007531) #8 LSS (ENSSTOG00000007503) #9 SPATC1L (ENSSTOG00000026388) #10 FTCD (ENSSTOG00000020132) #11 COL6A2 (ENSSTOG00000024366) #12 ENSSTOG00000022346 PCBP3 (ENSSTOG00000007178) #14 SLC19A1 (ENSSTOG00000007113) #15 ENSSTOG00000027467 #16 POFUT2 (ENSSTOG00000028617) #17 ADARB1 (ENSSTOG00000015792) #18 SLX9 (ENSSTOG00000028031) #19 ITGB2 (ENSSTOG00000001412) #20 PTTG1IP (ENSSTOG00000021779) #21 ENSSTOG00000010587 #22 UBE2G2 (ENSSTOG00000007968) #23 TSPEAR (ENSSTOG00000022950) ENSSTOG00000029592 ENSSTOG00000031377 ENSSTOG00000032824 ENSSTOG00000020703 #35 ENSSTOG00000020813 ENSSTOG00000030499 #35 ENSSTOG00000034349 ENSSTOG00000009410 Squirrel MODERN SPECIES 194 ENSSTOG00000033976 SMIM5 (ENSSTOG00000022610) RECQL5 (ENSSTOG00000012970) ENSSTOG00000030239 ENSSTOG00000021155 LLGL2 (ENSSTOG00000012891) TSEN54 (ENSSTOG00000012883) CASKIN2 (ENSSTOG00000021787) TMEM94 (ENSSTOG00000012842) GRB2 (ENSSTOG00000012661) ENSSTOG00000015212 MIF4GD (ENSSTOG00000022390) MRPS7 (ENSSTOG00000015200) GGA3 (ENSSTOG00000015187) NUP85 (ENSSTOG00000015175) ENSSTOG00000024685 #22 JPT1 (ENSSTOG00000015171) NT5C (ENSSTOG00000015167) ARMC7 (ENSSTOG00000015164) SLC16A5 (ENSSTOG00000015159) ENSSTOG00000019549 ATP5PD (ENSSTOG00000015154) MRPL58 (ENSSTOG00000015149) CDR2L (ENSSTOG00000023575) KCTD2 (ENSSTOG00000015158) HID1 (ENSSTOG00000015130) OTOP3 (ENSSTOG00000021608) OTOP2 (ENSSTOG00000025566) USH1G (ENSSTOG00000021597) FADS6 (ENSSTOG00000009655) FDXR (ENSSTOG00000009639) Marmotini ANCESTRAL SPECIES 21 ENSGT00410000025698.a ENSGT00390000011270 ENSGT00390000001960 ENSGT00940000157390 ENSGT00940000159171 ENSGT00940000159967 ENSGT00550000074815 ENSGT00940000157359 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000157560.e ENSGT00390000004585 ENSGT00940000159665 ENSGT00940000162410 ENSGT00950000183093.C ENSGT00950000182895.a.b.j.n.b #22 ENSGT00940000157671 ENSGT00520000058292 ENSGT00940000161139 ENSGT00390000011405 ENSGT00950000182767.a.a ENSGT00390000016465 ENSGT00390000006681.c ENSGT00940000157407 ENSGT00940000162464 ENSGT00940000160410 ENSGT00740000115684 ENSGT00940000160090 ENSGT00940000170327 ENSGT00940000154784.D.a.b ENSGT00940000153463.b Marmotini_b ANCESTRAL SPECIES 160 ENSGT00410000025698.a ENSGT00390000011270 ENSGT00390000001960 ENSGT00940000157390 ENSGT00940000159171 ENSGT00940000159967 ENSGT00550000074815 ENSGT00940000157359 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000157560.e ENSGT00390000004585 ENSGT00940000159665 ENSGT00940000162410 ENSGT00950000183093.C ENSGT00950000182895.a.b.j.n.b #22 ENSGT00940000157671 ENSGT00520000058292 ENSGT00940000161139 ENSGT00390000011405 Arctic ground squirrel MODERN SPECIES 54 GPATCH2 (ENSUPAG00010009619) SPATA17 (ENSUPAG00010009658) RRP15 (ENSUPAG00010009681) TGFB2 (ENSUPAG00010009688) LYPLAL1 (ENSUPAG00010009729) SLC30A10 (ENSUPAG00010009741) EPRS1 (ENSUPAG00010009749) BPNT1 (ENSUPAG00010009777) IARS2 (ENSUPAG00010009798) RAB3GAP2 (ENSUPAG00010009831) MARK1 (ENSUPAG00010009891) C1orf115 (ENSUPAG00010009923) MTARC2 (ENSUPAG00010009928) MTARC1 (ENSUPAG00010009939) HLX (ENSUPAG00010009960) ENSUPAG00010009975 #22 DUSP10 (ENSUPAG00010009979) ENSUPAG00010009984 HHIPL2 (ENSUPAG00010009987) ENSUPAG00010010009 Squirrel MODERN SPECIES 250 ENSSTOG00000030930 DNAH6 (ENSSTOG00000028220) SUCLG1 (ENSSTOG00000016550) LYPLAL1 (ENSSTOG00000025167) SLC30A10 (ENSSTOG00000003770) EPRS1 (ENSSTOG00000011870) BPNT1 (ENSSTOG00000005861) IARS2 (ENSSTOG00000005879) RAB3GAP2 (ENSSTOG00000020278) ENSSTOG00000004797 MARK1 (ENSSTOG00000004930) C1orf115 (ENSSTOG00000029139) MTARC2 (ENSSTOG00000006676) MTARC1 (ENSSTOG00000006692) HLX (ENSSTOG00000006326) ENSSTOG00000030827 #22 DUSP10 (ENSSTOG00000011662) HHIPL2 (ENSSTOG00000007102) Alpin marmot MODERN SPECIES 12 TGFB2 (ENSMMMG00000024197) LYPLAL1 (ENSMMMG00000024196) SLC30A10 (ENSMMMG00000024195) EPRS1 (ENSMMMG00000024193) BPNT1 (ENSMMMG00000024192) ENSMMMG00000024191 IARS2 (ENSMMMG00000024190) RAB3GAP2 (ENSMMMG00000024188) ENSMMMG00000024187 MARK1 (ENSMMMG00000024186) C1orf115 (ENSMMMG00000024185) MTARC2 (ENSMMMG00000024184) MTARC1 (ENSMMMG00000024183) HLX (ENSMMMG00000024182) ENSMMMG00000024180 ENSMMMG00000024179 #22 DUSP10 (ENSMMMG00000024177) ENSMMMG00000024176 TAF1A (ENSMMMG00000024175) MIA3 (ENSMMMG00000024174) ENSMMMG00000024173 ENSMMMG00000024172 ENSMMMG00000024171 ENSMMMG00000024170 DISP1 (ENSMMMG00000024169) TLR5 (ENSMMMG00000024168) SUSD4 (ENSMMMG00000024167) CCDC185 (ENSMMMG00000024166) CAPN8 (ENSMMMG00000024165) ENSMMMG00000024163 CAPN2 (ENSMMMG00000024162) Marmotini ANCESTRAL SPECIES 13 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000163601 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989.h #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.o #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826.lb Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 90 SAP30BP (ENSMMMG00000010396) RECQL5 (ENSMMMG00000010416) ENSMMMG00000010454 SMIM5 (ENSMMMG00000010460) ENSMMMG00000010467 LLGL2 (ENSMMMG00000010530) ENSMMMG00000010600 CASKIN2 (ENSMMMG00000010618) TMEM94 (ENSMMMG00000010651) GRB2 (ENSMMMG00000010717) SLC25A19 (ENSMMMG00000010758) MIF4GD (ENSMMMG00000010800) MRPS7 (ENSMMMG00000010811) GGA3 (ENSMMMG00000010824) NUP85 (ENSMMMG00000010923) ENSMMMG00000010977 #22 JPT1 (ENSMMMG00000011009) NT5C (ENSMMMG00000011020) ARMC7 (ENSMMMG00000011039) SLC16A5 (ENSMMMG00000011051) ENSMMMG00000011073 ENSMMMG00000011080 ATP5PD (ENSMMMG00000011085) MRPL58 (ENSMMMG00000011103) CDR2L (ENSMMMG00000011134) HID1 (ENSMMMG00000011148) OTOP3 (ENSMMMG00000011211) OTOP2 (ENSMMMG00000011228) USH1G (ENSMMMG00000011236) FADS6 (ENSMMMG00000011248) FDXR (ENSMMMG00000011264) Alpin marmot MODERN SPECIES 4 MCM3AP (ENSMMMG00000013170) #8 LSS (ENSMMMG00000013141) #9 SPATC1L (ENSMMMG00000013131) #10 FTCD (ENSMMMG00000013068) #11 ENSMMMG00000013067 #12 COL6A2 (ENSMMMG00000013048) #12 ENSMMMG00000013027 PCBP3 (ENSMMMG00000012976) #14 SLC19A1 (ENSMMMG00000012919) #15 ENSMMMG00000012904 #16 POFUT2 (ENSMMMG00000012809) #17 ADARB1 (ENSMMMG00000012767) #18 SLX9 (ENSMMMG00000012725) #19 ITGB2 (ENSMMMG00000012709) #20 ENSMMMG00000012708 #21 SUMO3 (ENSMMMG00000012686) #22 ENSMMMG00000012676 UBE2G2 (ENSMMMG00000012664) #23 ENSMMMG00000012657 ENSMMMG00000012650 ENSMMMG00000012640 #24 TSPEAR (ENSMMMG00000012623) LRRC3 (ENSMMMG00000012614) TRPM2 (ENSMMMG00000012573) CFAP410 (ENSMMMG00000012554) ENSMMMG00000012488 AIRE (ENSMMMG00000012367) ENSMMMG00000012363 ICOSLG (ENSMMMG00000012361) GATD3 (ENSMMMG00000012356) PWP2 (ENSMMMG00000011468) Marmotini_b ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.o #22 Squirrel MODERN SPECIES 605 ENSSTOG00000008319 #22 Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 329 IPO4 (ENSUPAG00010009601) REC8 (ENSUPAG00010009635) ENSUPAG00010009650 RNF31 (ENSUPAG00010009656) PSME2 (ENSUPAG00010009682) EMC9 (ENSUPAG00010009721) PSME1 (ENSUPAG00010009735) FITM1 (ENSUPAG00010009801) DCAF11 (ENSUPAG00010009807) PCK2 (ENSUPAG00010009905) NRL (ENSUPAG00010009985) CPNE6 (ENSUPAG00010009996) CARMIL3 (ENSUPAG00010010070) ENSUPAG00010010123 DHRS2 (ENSUPAG00010010137) ENSUPAG00010010483 #22 ENSUPAG00010010485 JPH4 (ENSUPAG00010010533) AP1G2 (ENSUPAG00010010537) THTPA (ENSUPAG00010010569) ZFHX2 (ENSUPAG00010010574) NGDN (ENSUPAG00010010585) MYH6 (ENSUPAG00010010620) CMTM5 (ENSUPAG00010010806) IL25 (ENSUPAG00010010826) EFS (ENSUPAG00010010832) SLC22A17 (ENSUPAG00010010867) PABPN1 (ENSUPAG00010010902) BCL2L2 (ENSUPAG00010010908) PPP1R3E (ENSUPAG00010010914) HOMEZ (ENSUPAG00010010920) Arctic ground squirrel MODERN SPECIES 924 SUMO3 (ENSUPAG00010023954) #22 UBE2G2 (ENSUPAG00010023952) #23 ENSUPAG00010023949 #30 ENSUPAG00010023947 #30 Hystricomorpha ANCESTRAL SPECIES 60 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 ENSGT00510000047718 ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 Naked mole-rat female MODERN SPECIES 11 ENSHGLG00000012528 #8 LSS (ENSHGLG00000008767) #9 SPATC1L (ENSHGLG00000013076) #10 FTCD (ENSHGLG00000048038) #11 COL6A2 (ENSHGLG00000009116) #12 COL6A1 (ENSHGLG00000017878) #13 PCBP3 (ENSHGLG00000018620) #14 SLC19A1 (ENSHGLG00000013143) #15 ENSHGLG00000018308 #16 POFUT2 (ENSHGLG00000041783) #17 ADARB1 (ENSHGLG00000005906) #18 SLX9 (ENSHGLG00000045493) #19 ITGB2 (ENSHGLG00000013472) #20 ENSHGLG00000049629 PTTG1IP (ENSHGLG00000033185) #21 ENSHGLG00000037860 #22 ENSHGLG00000009258 #23 ENSHGLG00000014199 ENSHGLG00000005505 ENSHGLG00000043957 ENSHGLG00000038544 ENSHGLG00000007283 #24 ENSHGLG00000015985 ENSHGLG00000046004 CSTB (ENSHGLG00000047009) RRP1 (ENSHGLG00000050109) AGPAT3 (ENSHGLG00000048529) TRAPPC10 (ENSHGLG00000013176) PWP2 (ENSHGLG00000017401) ENSHGLG00000018104 ENSHGLG00000013877 Hystricomorpha_a ANCESTRAL SPECIES 37 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 ENSGT00510000047718 ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 Guinea pig MODERN SPECIES 90 ADARB1 (ENSCPOG00000022969) #18 SLX9 (ENSCPOG00000036519) #19 ITGB2 (ENSCPOG00000025922) #20 PTTG1IP (ENSCPOG00000023250) #21 SUMO3 (ENSCPOG00000025203) #22 UBE2G2 (ENSCPOG00000035970) #23 ENSCPOG00000037876 ENSCPOG00000032969 ENSCPOG00000038786 ENSCPOG00000034347 TSPEAR (ENSCPOG00000004362) ENSCPOG00000036402 PDXK (ENSCPOG00000039719) CSTB (ENSCPOG00000031855) RRP1 (ENSCPOG00000038986) AGPAT3 (ENSCPOG00000032718) TRAPPC10 (ENSCPOG00000011117) PWP2 (ENSCPOG00000023616) GATD3 (ENSCPOG00000011419) DNMT3L (ENSCPOG00000004070) Hystricomorpha_b ANCESTRAL SPECIES ENSGT00950000182895.a.b.j #22 Degu MODERN SPECIES 165 ENSODEG00000003412 PRR16 (ENSODEG00000003401) ENSODEG00000003064 ENSODEG00000003051 FAM170A (ENSODEG00000003032) ENSODEG00000003016 HSD17B4 (ENSODEG00000002614) ENSODEG00000018825 ENSODEG00000002485 DMXL1 (ENSODEG00000002200) ENSODEG00000018764 DTWD2 (ENSODEG00000001974) ENSODEG00000018846 ENSODEG00000018768 #22 ENSODEG00000002744 SEMA6A (ENSODEG00000002653) ENSODEG00000002602 ENSODEG00000002580 ENSODEG00000002563 ARL14EPL (ENSODEG00000002532) LVRN (ENSODEG00000002192) ENSODEG00000002163 ATG12 (ENSODEG00000002126) CDO1 (ENSODEG00000002104) TMED7 (ENSODEG00000002066) ENSODEG00000018754 FEM1C (ENSODEG00000002045) CCDC112 (ENSODEG00000002154) PGGT1B (ENSODEG00000002053) Rodentia_B ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000161526.b ENSGT00940000155183 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Kangaroo rat MODERN SPECIES 478 Ybey (ENSDORG00000024242) #7 Mcm3ap (ENSDORG00000004416) #8 Lss (ENSDORG00000010415) #9 Spatc1l (ENSDORG00000010414) #10 Ftcd (ENSDORG00000004547) #11 Col6a2 (ENSDORG00000028732) #12 ENSDORG00000004103 Pcbp3 (ENSDORG00000003640) #14 Slc19a1 (ENSDORG00000008087) #15 ENSDORG00000011477 Pofut2 (ENSDORG00000009350) #17 Adarb1 (ENSDORG00000000619) #18 Fam207a (ENSDORG00000028131) #19 ENSDORG00000012531 #20 Pttg1ip (ENSDORG00000028984) #21 Sumo3 (ENSDORG00000025904) #22 Ube2g2 (ENSDORG00000025137) #23 ENSDORG00000014492 ENSDORG00000019765 ENSDORG00000026443 ENSDORG00000024465 ENSDORG00000029443 ENSDORG00000028505 ENSDORG00000019773 Myomorpha ANCESTRAL SPECIES 14 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000161526.b ENSGT00940000155183 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Lesser Egyptian jerboa MODERN SPECIES 170 2610028H24Rik (ENSJJAG00000013433) Mcm3ap (ENSJJAG00000011921) #8 Lss (ENSJJAG00000008335) #9 Spatc1l (ENSJJAG00000003377) #10 Ftcd (ENSJJAG00000000888) #11 Col6a2 (ENSJJAG00000023030) #12 Col6a1 (ENSJJAG00000021936) #13 Pcbp3 (ENSJJAG00000021192) #14 Slc19a1 (ENSJJAG00000020575) #15 Col18a1 (ENSJJAG00000018606) #16 Pofut2 (ENSJJAG00000017712) #17 Adarb1 (ENSJJAG00000016847) #18 ENSJJAG00000016167 #19 Itgb2 (ENSJJAG00000015668) #20 Pttg1ip (ENSJJAG00000011874) #21 Sumo3 (ENSJJAG00000011166) #22 Ube2g2 (ENSJJAG00000010215) #23 ENSJJAG00000009838 ENSJJAG00000009512 ENSJJAG00000007731 Tspear (ENSJJAG00000004036) Lrrc3 (ENSJJAG00000001845) Trpm2 (ENSJJAG00000022864) Cfap410 (ENSJJAG00000021716) Pfkl (ENSJJAG00000021078) Aire (ENSJJAG00000017059) ENSJJAG00000014700 ENSJJAG00000014399 Gatd3a (ENSJJAG00000013621) Pwp2 (ENSJJAG00000013039) Trappc10 (ENSJJAG00000011263) Muroidea ANCESTRAL SPECIES 11 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000161526.b ENSGT00940000155183 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Upper Galilee mountains blind mole rat MODERN SPECIES 1105 Ybey (ENSNGAG00000000949) #7 Mcm3ap (ENSNGAG00000020806) #8 Lss (ENSNGAG00000018100) #9 Spatc1l (ENSNGAG00000016890) #10 Ftcd (ENSNGAG00000015978) #11 Col6a2 (ENSNGAG00000013702) #12 Col6a1 (ENSNGAG00000010525) #13 Pcbp3 (ENSNGAG00000005416) #14 ENSNGAG00000003477 #15 Col18a1 (ENSNGAG00000019514) #16 Pofut2 (ENSNGAG00000016043) #17 Adarb1 (ENSNGAG00000021602) #18 Fam207a (ENSNGAG00000020787) #19 Itgb2 (ENSNGAG00000015702) #20 Pttg1ip (ENSNGAG00000014261) #21 Sumo3 (ENSNGAG00000009915) #22 Ube2g2 (ENSNGAG00000002914) #23 ENSNGAG00000022913 ENSNGAG00000022654 ENSNGAG00000018160 Muroidea_A ANCESTRAL SPECIES 8 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.f ENSGT00940000161526.b ENSGT00940000155183.e ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Cricetidae ANCESTRAL SPECIES 9 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.f ENSGT00940000161526.b ENSGT00940000155183.e.a.b ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Cricetinae ANCESTRAL SPECIES 24 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.e.a.a.b.a ENSGT00940000155183.e.a.b.a.a ENSGT00940000155183.f ENSGT00940000161526.b ENSGT00940000155183.e.a.b.a.b ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a Golden Hamster MODERN SPECIES 641 Mcm3ap (ENSMAUG00000008393) #8 Lss (ENSMAUG00000005365) #9 Spatc1l (ENSMAUG00000006869) #10 Ftcd (ENSMAUG00000004152) #11 Col6a2 (ENSMAUG00000022073) #12 ENSMAUG00000020615 Pcbp3 (ENSMAUG00000007036) #14 ENSMAUG00000012520 Slc19a1 (ENSMAUG00000007979) #15 Col18a1 (ENSMAUG00000008076) #16 Pofut2 (ENSMAUG00000006922) #17 Adarb1 (ENSMAUG00000009334) #18 Fam207a (ENSMAUG00000009365) #19 ENSMAUG00000021821 #20 Pttg1ip (ENSMAUG00000010900) #21 Sumo3 (ENSMAUG00000009748) #22 Ube2g2 (ENSMAUG00000022077) #23 ENSMAUG00000021040 ENSMAUG00000002462 ENSMAUG00000021981 ENSMAUG00000007884 ENSMAUG00000012939 Tspear (ENSMAUG00000011883) Lrrc3 (ENSMAUG00000021907) Trpm2 (ENSMAUG00000005011) Cfap410 (ENSMAUG00000018378) Pfkl (ENSMAUG00000017741) Aire (ENSMAUG00000021943) Dnmt3l (ENSMAUG00000019680) Icosl (ENSMAUG00000019140) Pwp2 (ENSMAUG00000020265) Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 215 Gsto2 (ENSCGRG00001019874) Itprip (ENSCGRG00001015730) Cfap58 (ENSCGRG00001018536) Sorcs3 (ENSCGRG00001013586) Sorcs1 (ENSCGRG00001015262) Xpnpep1 (ENSCGRG00001023199) Add3 (ENSCGRG00001016019) ENSCGRG00001013476 Smndc1 (ENSCGRG00001012973) Mxi1 (ENSCGRG00001009794) Dusp5 (ENSCGRG00001006024) Smc3 (ENSCGRG00001024369) Rbm20 (ENSCGRG00001023235) Pdcd4 (ENSCGRG00001007322) ENSCGRG00001004791 ENSCGRG00001001812 #22 Shoc2 (ENSCGRG00001000210) Adra2a (ENSCGRG00001015710) ENSCGRG00001014865 Gpam (ENSCGRG00001022396) Tectb (ENSCGRG00001021092) Gucy2g (ENSCGRG00001020462) ENSCGRG00001019520 Zdhhc6 (ENSCGRG00001017113) Vti1a (ENSCGRG00001020765) Tcf7l2 (ENSCGRG00001019358) Habp2 (ENSCGRG00001017201) Nrap (ENSCGRG00001000170) Casp7 (ENSCGRG00001019974) Plekhs1 (ENSCGRG00001018611) Dclre1a (ENSCGRG00001017843) Chinese hamster chok1gshd MODERN SPECIES 204 Ybey (ENSCGRG00001022036) #7 Mcm3ap (ENSCGRG00001015274) #8 Lss (ENSCGRG00001020282) #9 Spatc1l (ENSCGRG00001017850) #10 Ftcd (ENSCGRG00001011730) #11 Col6a2 (ENSCGRG00001003342) #12 Col6a1 (ENSCGRG00001017421) #13 Pcbp3 (ENSCGRG00001006836) #14 SLC19A1 (ENSCGRG00001016846) #15 Col18a1 (ENSCGRG00001013369) #16 Pofut2 (ENSCGRG00001022765) #17 Adarb1 (ENSCGRG00001023922) #18 Fam207a (ENSCGRG00001016236) #19 Itgb2 (ENSCGRG00001016235) #20 Pttg1ip (ENSCGRG00001000333) #21 Sumo3 (ENSCGRG00001014923) #22 Ube2g2 (ENSCGRG00001012138) #23 ENSCGRG00001011367 ENSCGRG00001023741 ENSCGRG00001013697 ENSCGRG00001016181 ENSCGRG00001012982 ENSCGRG00001018033 ENSCGRG00001011140 ENSCGRG00001007516 ENSCGRG00001006645 ENSCGRG00001000302 ENSCGRG00001000038 Gm36176 (ENSCGRG00001022992) ENSCGRG00001017382 ENSCGRG00001013139 Cricetidae_B ANCESTRAL SPECIES 12 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 13 Or7d9 (ENSMOCG00000000337) ENSMOCG00000019115 ENSMOCG00000012110 ENSMOCG00000004665 Or1m1 (ENSMOCG00000006062) ENSMOCG00000006310 Zfp558 (ENSMOCG00000018648) Naalad2 (ENSMOCG00000004722) Chordc1 (ENSMOCG00000002318) ENSMOCG00000016118 Fat3 (ENSMOCG00000011364) Mtnr1b (ENSMOCG00000007650) Slc36a4 (ENSMOCG00000018384) Deup1 (ENSMOCG00000020791) Smco4 (ENSMOCG00000006274) ENSMOCG00000021789 #22 Cep295 (ENSMOCG00000021770) Taf1d (ENSMOCG00000014011) 4931406C07Rik (ENSMOCG00000012170) Med17 (ENSMOCG00000018802) Vstm5 (ENSMOCG00000012686) ENSMOCG00000015072 ENSMOCG00000021818 Alkbh8 (ENSMOCG00000019349) Cwf19l2 (ENSMOCG00000010389) Endod1 (ENSMOCG00000016035) Sesn3 (ENSMOCG00000013595) Fam76b (ENSMOCG00000001551) Cep57 (ENSMOCG00000005014) Mtmr2 (ENSMOCG00000009930) Maml2 (ENSMOCG00000021568) Prairie vole MODERN SPECIES 352 Ybey (ENSMOCG00000012634) #7 Mcm3ap (ENSMOCG00000018380) #8 Lss (ENSMOCG00000020263) #9 Spatc1l (ENSMOCG00000012025) #10 Ftcd (ENSMOCG00000013801) #11 Col6a2 (ENSMOCG00000007120) #12 Col6a1 (ENSMOCG00000015635) #13 Pcbp3 (ENSMOCG00000016127) #14 Slc19a1 (ENSMOCG00000008838) #15 Col18a1 (ENSMOCG00000019606) #16 Pofut2 (ENSMOCG00000013158) #17 Adarb1 (ENSMOCG00000018324) #18 Fam207a (ENSMOCG00000021449) #19 Itgb2 (ENSMOCG00000022498) #20 Pttg1ip (ENSMOCG00000020270) #21 ENSMOCG00000021821 #22 Ube2g2 (ENSMOCG00000001721) #23 Tspear (ENSMOCG00000013552) ENSMOCG00000016087 ENSMOCG00000017107 ENSMOCG00000017419 ENSMOCG00000018107 ENSMOCG00000004341 ENSMOCG00000013216 ENSMOCG00000014262 ENSMOCG00000015079 ENSMOCG00000016139 Lrrc3 (ENSMOCG00000017485) Trpm2 (ENSMOCG00000019856) Cfap410 (ENSMOCG00000020426) ENSMOCG00000013045 Prairie vole MODERN SPECIES 15 Itgb4 (ENSMOCG00000018829) Sap30bp (ENSMOCG00000011898) Recql5 (ENSMOCG00000019642) Myo15b (ENSMOCG00000013403) Llgl2 (ENSMOCG00000016380) Tsen54 (ENSMOCG00000021585) ENSMOCG00000015226 Tmem94 (ENSMOCG00000014527) ENSMOCG00000002602 Grb2 (ENSMOCG00000017537) ENSMOCG00000013006 Mif4gd (ENSMOCG00000010287) Mrps7 (ENSMOCG00000005519) Gga3 (ENSMOCG00000003209) Nup85 (ENSMOCG00000018333) ENSMOCG00000022080 #22 ENSMOCG00000012165 Nt5c (ENSMOCG00000019361) Armc7 (ENSMOCG00000013951) Slc16a5 (ENSMOCG00000010701) Trim80 (ENSMOCG00000021797) Kctd2 (ENSMOCG00000012062) Atp5h (ENSMOCG00000015015) Mrpl58 (ENSMOCG00000015630) Cdr2l (ENSMOCG00000019874) Hid1 (ENSMOCG00000012205) ENSMOCG00000011864 Ush1g (ENSMOCG00000017696) Otop2 (ENSMOCG00000012832) Fads6 (ENSMOCG00000012241) ENSMOCG00000010764 Murinae ANCESTRAL SPECIES 18 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.f ENSGT00940000161526.b ENSGT00940000155183.e ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Rat MODERN SPECIES 16 Adck1 (ENSRNOG00000012685) Nrxn3 (ENSRNOG00000047574) dsr-2 (ENSRNOG00000066815) ENSRNOG00000062878 ENSRNOG00000063297 Dio2 (ENSRNOG00000062383) Cep128 (ENSRNOG00000003908) Tshr (ENSRNOG00000003972) Gtf2a1 (ENSRNOG00000004300) Ston2 (ENSRNOG00000004458) Sel1l (ENSRNOG00000004464) AABR07065217.2 (ENSRNOG00000042542) ENSRNOG00000030420 ENSRNOG00000066641 AABR07065265.1 (ENSRNOG00000021751) LOC103692684 (ENSRNOG00000070197) #22 ENSRNOG00000066374 Flrt2 (ENSRNOG00000003732) Galc (ENSRNOG00000003759) Gpr65 (ENSRNOG00000065590) Kcnk10 (ENSRNOG00000003813) Spata7 (ENSRNOG00000003955) Ptpn21 (ENSRNOG00000060568) Zc3h14 (ENSRNOG00000004083) Eml5 (ENSRNOG00000004207) Ttc8 (ENSRNOG00000004542) Cpg1 (ENSRNOG00000060278) Foxn3 (ENSRNOG00000004709) Efcab11 (ENSRNOG00000053317) Tdp1 (ENSRNOG00000003831) Kcnk13 (ENSRNOG00000047363) Mus ANCESTRAL SPECIES 15 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000155183.e.d.a ENSGT00940000155183.f.a ENSGT00940000155183.e.c ENSGT00940000161526.b.r.b.b ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 Shrew mouse MODERN SPECIES 22 Mcm3ap (MGP_PahariEiJ_G0030883) #8 Lss (MGP_PahariEiJ_G0030884) #9 Spatc1l (MGP_PahariEiJ_G0030885) #10 Ftcd (MGP_PahariEiJ_G0030886) #11 Col6a2 (MGP_PahariEiJ_G0030887) #12 Col6a1 (MGP_PahariEiJ_G0030888) #13 Pcbp3 (MGP_PahariEiJ_G0030889) #14 MGP_PahariEiJ_G0030890 Slc19a1 (MGP_PahariEiJ_G0030891) #15 Col18a1 (MGP_PahariEiJ_G0030892) #16 Pofut2 (MGP_PahariEiJ_G0030893) #17 Adarb1 (MGP_PahariEiJ_G0030894) #18 Fam207a (MGP_PahariEiJ_G0030895) #19 Itgb2 (MGP_PahariEiJ_G0030896) #20 Pttg1ip (MGP_PahariEiJ_G0030897) #21 Sumo3 (MGP_PahariEiJ_G0030898) #22 Ube2g2 (MGP_PahariEiJ_G0030899) #23 MGP_PahariEiJ_G0030900 Gm10272 (MGP_PahariEiJ_G0030901) MGP_PahariEiJ_G0030902 MGP_PahariEiJ_G0030903 Krtap12-1 (MGP_PahariEiJ_G0030904) MGP_PahariEiJ_G0030905 MGP_PahariEiJ_G0030906 MGP_PahariEiJ_G0030907 MGP_PahariEiJ_G0030908 Tspear (MGP_PahariEiJ_G0030909) Lrrc3 (MGP_PahariEiJ_G0030910) MGP_PahariEiJ_G0030911 Cfap410 (MGP_PahariEiJ_G0030912) Pfkl (MGP_PahariEiJ_G0030913) Mus_A ANCESTRAL SPECIES 11 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00900000143399 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000155183.e.c.b.b.a ENSGT00940000155183.e.c.b.a ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Ryukyu mouse MODERN SPECIES 1 Lss (MGP_CAROLIEiJ_G0015470) #9 Spatc1l (MGP_CAROLIEiJ_G0015471) #10 Ftcd (MGP_CAROLIEiJ_G0015472) #11 Col6a2 (MGP_CAROLIEiJ_G0015473) #12 Col6a1 (MGP_CAROLIEiJ_G0015474) #13 Pcbp3 (MGP_CAROLIEiJ_G0015475) #14 MGP_CAROLIEiJ_G0015476 Slc19a1 (MGP_CAROLIEiJ_G0015477) #15 Col18a1 (MGP_CAROLIEiJ_G0015478) #16 MGP_CAROLIEiJ_G0015479 Pofut2 (MGP_CAROLIEiJ_G0015480) #17 Adarb1 (MGP_CAROLIEiJ_G0015481) #18 Fam207a (MGP_CAROLIEiJ_G0015482) #19 Itgb2 (MGP_CAROLIEiJ_G0015483) #20 Pttg1ip (MGP_CAROLIEiJ_G0015484) #21 Sumo3 (MGP_CAROLIEiJ_G0015485) #22 Ube2g2 (MGP_CAROLIEiJ_G0015486) #23 Gm10272 (MGP_CAROLIEiJ_G0015487) Gm10024 (MGP_CAROLIEiJ_G0015488) Gm10142 (MGP_CAROLIEiJ_G0015489) Krtap12-1 (MGP_CAROLIEiJ_G0015490) Gm10100 (MGP_CAROLIEiJ_G0015491) MGP_CAROLIEiJ_G0015492 Gm19668 (MGP_CAROLIEiJ_G0015493) MGP_CAROLIEiJ_G0015494 Krtap10-10 (MGP_CAROLIEiJ_G0015495) Tspear (MGP_CAROLIEiJ_G0015496) Lrrc3 (MGP_CAROLIEiJ_G0015497) MGP_CAROLIEiJ_G0015498 Cfap410 (MGP_CAROLIEiJ_G0015499) Pfkl (MGP_CAROLIEiJ_G0015500) Mus_B ANCESTRAL SPECIES 10 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00900000143399 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT01050000248522 ENSGT00390000011821.b Mouse MODERN SPECIES 1 Ybey (ENSMUSG00000033126) #7 Mcm3ap (ENSMUSG00000001150) #8 Lss (ENSMUSG00000033105) #9 Spatc1l (ENSMUSG00000009115) #10 Ftcd (ENSMUSG00000001155) #11 Col6a2 (ENSMUSG00000020241) #12 Col6a1 (ENSMUSG00000001119) #13 Pcbp3 (ENSMUSG00000001120) #14 Slc19a1 (ENSMUSG00000001436) #15 Col18a1 (ENSMUSG00000001435) #16 Pofut2 (ENSMUSG00000020260) #17 Adarb1 (ENSMUSG00000020262) #18 Fam207a (ENSMUSG00000032977) #19 Itgb2 (ENSMUSG00000000290) #20 Pttg1ip (ENSMUSG00000009291) #21 Sumo3 (ENSMUSG00000020265) #22 Ube2g2 (ENSMUSG00000009293) #23 Tspear (ENSMUSG00000069581) Gm19402 (ENSMUSG00000095970) Gm9508 (ENSMUSG00000112170) Gm10272 (ENSMUSG00000069584) Gm10024 (ENSMUSG00000094012) Gm10142 (ENSMUSG00000094146) Krtap12-1 (ENSMUSG00000069583) Gm10100 (ENSMUSG00000096421) Gm18596 (ENSMUSG00000112864) Gm9736 (ENSMUSG00000112380) Gm3233 (ENSMUSG00000094120) Gm3238 (ENSMUSG00000095817) Gm7138 (ENSMUSG00000095593) Gm3250 (ENSMUSG00000096481) Mus_C ANCESTRAL SPECIES 7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00900000143399 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.f.b.a ENSGT00940000161526.b.r.a ENSGT00940000161526.b.r.b.a.b.b ENSGT00940000161526.b.r.b.a.a ENSGT00940000161526.b.r.b.a.b.a ENSGT00940000161526.b.r.b.b ENSGT00940000155183.e.c.b.b.b ENSGT00940000155183.f.a ENSGT00940000155183.e.d.a.b ENSGT00510000047718 ENSGT00940000155183.e.c.b.a ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 spretus MODERN SPECIES 1 Lss (MGP_SPRETEiJ_G0016283) #9 Spatc1l (MGP_SPRETEiJ_G0016284) #10 Ftcd (MGP_SPRETEiJ_G0016285) #11 Col6a2 (MGP_SPRETEiJ_G0016286) #12 Col6a1 (MGP_SPRETEiJ_G0016287) #13 Pcbp3 (MGP_SPRETEiJ_G0016288) #14 MGP_SPRETEiJ_G0016289 Slc19a1 (MGP_SPRETEiJ_G0016290) #15 Col18a1 (MGP_SPRETEiJ_G0016291) #16 MGP_SPRETEiJ_G0016292 Pofut2 (MGP_SPRETEiJ_G0016293) #17 Adarb1 (MGP_SPRETEiJ_G0016294) #18 Fam207a (MGP_SPRETEiJ_G0016295) #19 Itgb2 (MGP_SPRETEiJ_G0016296) #20 Pttg1ip (MGP_SPRETEiJ_G0016297) #21 Sumo3 (MGP_SPRETEiJ_G0016298) #22 Ube2g2 (MGP_SPRETEiJ_G0016299) #23 MGP_SPRETEiJ_G0016300 Gm10272 (MGP_SPRETEiJ_G0016301) Gm10024 (MGP_SPRETEiJ_G0016302) Gm10142 (MGP_SPRETEiJ_G0016303) Krtap12-1 (MGP_SPRETEiJ_G0016304) Gm10100 (MGP_SPRETEiJ_G0016305) Gm19668 (MGP_SPRETEiJ_G0016306) MGP_SPRETEiJ_G0016307 Tspear (MGP_SPRETEiJ_G0016308) MGP_SPRETEiJ_G0016309 Lrrc3 (MGP_SPRETEiJ_G0016310) Trpm2 (MGP_SPRETEiJ_G0016311) Cfap410 (MGP_SPRETEiJ_G0016312) Pfkl (MGP_SPRETEiJ_G0016313) Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 3135 Recql5 (ENSMSIG00000028015) Smim6 (ENSMSIG00000028032) Smim5 (ENSMSIG00000028034) Myo15b (ENSMSIG00000028039) Llgl2 (ENSMSIG00000028102) Tsen54 (ENSMSIG00000028141) Caskin2 (ENSMSIG00000028161) Tmem94 (ENSMSIG00000028168) ENSMSIG00000028209 Grb2 (ENSMSIG00000028212) Slc25a19 (ENSMSIG00000028240) Mif4gd (ENSMSIG00000028258) Mrps7 (ENSMSIG00000028269) Gga3 (ENSMSIG00000028278) Nup85 (ENSMSIG00000028322) ENSMSIG00000028342 #22 Jpt1 (ENSMSIG00000028349) Armc7 (ENSMSIG00000028366) Nt5c (ENSMSIG00000028372) Slc16a5 (ENSMSIG00000028378) Trim80 (ENSMSIG00000028383) ENSMSIG00000028388 ENSMSIG00000028398 Mrpl58 (ENSMSIG00000028407) Cdr2l (ENSMSIG00000028417) Hid1 (ENSMSIG00000028424) Otop3 (ENSMSIG00000028450) Otop2 (ENSMSIG00000028457) Ush1g (ENSMSIG00000028465) Fads6 (ENSMSIG00000028470) Fdxr (ENSMSIG00000028471) Steppe mouse MODERN SPECIES 2060 ENSMSIG00000018269 #21 ENSMSIG00000018250 #22 ENSMSIG00000018221 #23 ENSMSIG00000018206 ENSMSIG00000018197 Gm9508 (ENSMSIG00000018192) Gm10272 (ENSMSIG00000018187) Gm10024 (ENSMSIG00000018183) Gm10142 (ENSMSIG00000018177) Krtap12-1 (ENSMSIG00000018172) Gm10100 (ENSMSIG00000018166) ENSMSIG00000018163 Lagomorpha ANCESTRAL SPECIES 342 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163845 #30 ENSGT00510000047718 Rabbit DUPLICATION Rabbit MODERN SPECIES 751 ENSOCUG00000021739 #22 UBE2G2 (ENSOCUG00000012944) #23 ENSOCUG00000033287 #30 ENSOCUG00000032533 ENSOCUG00000014146 ENSOCUG00000037262 #30 ENSOCUG00000037588 #30 ENSOCUG00000033100 #30 TSPEAR (ENSOCUG00000015149) ENSOCUG00000000399 #30 LRRC3 (ENSOCUG00000002572) ENSOCUG00000029179 Rabbit MODERN SPECIES 506 ENSOCUG00000035369 ENSOCUG00000029349 ENSOCUG00000029998 ENSOCUG00000031281 ORYCUNV1R1510 (ENSOCUG00000034811) ENSOCUG00000036702 ENSOCUG00000024089 ENSOCUG00000029259 ENSOCUG00000004348 ENSOCUG00000034034 ENSOCUG00000032430 ENSOCUG00000039341 ENSOCUG00000024157 #22 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000163845 #30 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT01020000234487 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000163845 #30 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT01020000234487 Artiodactyla ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT01020000234487 ENSGT00390000011821.b Suina ANCESTRAL SPECIES 35 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.b.b ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT01020000234487 Chacoan peccary MODERN SPECIES 916 POFUT2 (ENSCWAG00000021320) #17 ADARB1 (ENSCWAG00000021307) #18 SLX9 (ENSCWAG00000021290) #19 ITGB2 (ENSCWAG00000021248) #20 PTTG1IP (ENSCWAG00000021232) #21 SUMO3 (ENSCWAG00000021223) #22 UBE2G2 (ENSCWAG00000021213) #23 Pig MODERN SPECIES 4 COL6A1 (ENSSSCG00000022506) #13 PCBP3 (ENSSSCG00000023041) #14 ENSSSCG00000030696 #15 COL18A1 (ENSSSCG00000038089) #16 ENSSSCG00000012088 #17 ADARB1 (ENSSSCG00000012089) #18 SLX9 (ENSSSCG00000028571) #19 ITGB2 (ENSSSCG00000025133) #20 PTTG1IP (ENSSSCG00000031249) #21 SUMO3 (ENSSSCG00000035795) #22 UBE2G2 (ENSSSCG00000027165) #23 ENSSSCG00000025793 ENSSSCG00000029038 ENSSSCG00000037222 ENSSSCG00000039836 ENSSSCG00000047876 ENSSSCG00000046681 ENSSSCG00000047309 ENSSSCG00000048449 ENSSSCG00000028768 TSPEAR (ENSSSCG00000022988) LRRC3 (ENSSSCG00000053846) TRPM2 (ENSSSCG00000023762) CFAP410 (ENSSSCG00000024500) PFKL (ENSSSCG00000028197) Artiodactyla_a ANCESTRAL SPECIES 8 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Camelidae ANCESTRAL SPECIES 38 ENSGT00390000007870 ENSGT00940000157800 ENSGT00940000165228 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.j #22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000162951 ENSGT00940000158336 ENSGT00390000003582 ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00950000182990.b ENSGT00390000013574 Arabian camel MODERN SPECIES 7 SAP30BP (ENSCDRG00005005647) RECQL5 (ENSCDRG00005005744) SMIM6 (ENSCDRG00005005981) SMIM5 (ENSCDRG00005005996) ENSCDRG00005006040 LLGL2 (ENSCDRG00005006411) TSEN54 (ENSCDRG00005006499) CASKIN2 (ENSCDRG00005006534) TMEM94 (ENSCDRG00005006633) GRB2 (ENSCDRG00005006824) SLC25A19 (ENSCDRG00005006954) MIF4GD (ENSCDRG00005007027) MRPS7 (ENSCDRG00005007079) GGA3 (ENSCDRG00005007129) NUP85 (ENSCDRG00005007337) ENSCDRG00005007486 #22 JPT1 (ENSCDRG00005007621) ENSCDRG00005007642 ARMC7 (ENSCDRG00005007777) SLC16A5 (ENSCDRG00005007957) ENSCDRG00005007997 KCTD2 (ENSCDRG00005008073) ENSCDRG00005008115 MRPL58 (ENSCDRG00005008161) CDR2L (ENSCDRG00005008217) HID1 (ENSCDRG00005008264) OTOP3 (ENSCDRG00005008486) OTOP2 (ENSCDRG00005008538) USH1G (ENSCDRG00005008633) FADS6 (ENSCDRG00005008674) FDXR (ENSCDRG00005008777) Artiodactyla_b ANCESTRAL SPECIES 6 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Pecora ANCESTRAL SPECIES 8 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT01100000265026 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Yarkand deer MODERN SPECIES 13 ENSCHYG00000006473 ENSCHYG00000006490 TP53INP1 (ENSCHYG00000006568) ENSCHYG00000006609 CCNE2 (ENSCHYG00000006642) INTS8 (ENSCHYG00000006742) DPY19L4 (ENSCHYG00000006979) ESRP1 (ENSCHYG00000007116) VIRMA (ENSCHYG00000007760) RAD54B (ENSCHYG00000008124) GEM (ENSCHYG00000008382) CDH17 (ENSCHYG00000008444) ENSCHYG00000008519 ENSCHYG00000008529 PDP1 (ENSCHYG00000008541) ENSCHYG00000008561 #22 TMEM67 (ENSCHYG00000008621) ENSCHYG00000009165 RBM12B (ENSCHYG00000009201) ENSCHYG00000009303 ENSCHYG00000009356 TRIQK (ENSCHYG00000009400) RUNX1T1 (ENSCHYG00000009466) ENSCHYG00000009900 LRRC69 (ENSCHYG00000009964) ENSCHYG00000010134 PIP4P2 (ENSCHYG00000010301) C8orf88 (ENSCHYG00000010352) ENSCHYG00000010442 CALB1 (ENSCHYG00000010474) DECR1 (ENSCHYG00000010587) Percora_a ANCESTRAL SPECIES 7 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT01100000265026 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Bovidae ANCESTRAL SPECIES 9 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT01100000265026 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Bovinae ANCESTRAL SPECIES 6 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT01100000265026 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Bos ANCESTRAL SPECIES 7 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.a.b.d ENSGT00940000163441.f.a.b.c.a.b.a.b.a.b.a.b ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT01100000265026 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Bos_a ANCESTRAL SPECIES 5 ENSGT00390000011514 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.a.b.d ENSGT00940000163441.f.a.b.c.a.b.a.a.a ENSGT00960000187239.b ENSGT00940000161526.b.i ENSGT00940000161526.b.j.a ENSGT00960000187239.a ENSGT00940000163441.f.a.b.c.b ENSGT00940000163441.f.a.b.c.a.b.a.b.a.b.a.b ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT01100000265026 Domestic yak MODERN SPECIES 4 AMPD3 (ENSBGRG00000004237) ADM (ENSBGRG00000004160) ENSBGRG00000004139 SBF2 (ENSBGRG00000003871) SWAP70 (ENSBGRG00000003749) ENSBGRG00000003714 WEE1 (ENSBGRG00000003666) ENSBGRG00000011132 ZNF143 (ENSBGRG00000010621) IPO7 (ENSBGRG00000010346) ENSBGRG00000010326 TMEM41B (ENSBGRG00000010234) DENND5A (ENSBGRG00000009763) SCUBE2 (ENSBGRG00000008891) NRIP3 (ENSBGRG00000008609) ENSBGRG00000008570 #22 ASCL3 (ENSBGRG00000008558) C11orf16 (ENSBGRG00000008516) ENSBGRG00000008233 DENND2B (ENSBGRG00000007364) ENSBGRG00000007115 TRIM66 (ENSBGRG00000007026) STK33 (ENSBGRG00000006761) ENSBGRG00000006613 RIC3 (ENSBGRG00000006512) TUB (ENSBGRG00000006223) EIF3F (ENSBGRG00000006058) ENSBGRG00000006022 ENSBGRG00000005999 ENSBGRG00000005965 ENSBGRG00000005955 Wild yak MODERN SPECIES 1051 POFUT2 (ENSBMUG00000002792) #17 ADARB1 (ENSBMUG00000002765) #18 SLX9 (ENSBMUG00000002589) #19 ITGB2 (ENSBMUG00000001419) #20 PTTG1IP (ENSBMUG00000000206) #21 SUMO3 (ENSBMUG00000000140) #22 ENSBMUG00000000080 #23 Bos_b ANCESTRAL SPECIES 5 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000163601 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.a.b.c.a.b.a.a.a ENSGT00960000187239.b ENSGT00940000161526.b.i ENSGT00940000161526.b.j.a ENSGT00940000163441.f.a.b.c.b ENSGT00940000163441.f.b.b.c.b ENSGT00940000163441.f.a.b.c.a.b.a.b.a.b.b ENSGT00940000163441.f.b.b.c.a ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT01100000265026 Hybrid Bos Indicus MODERN SPECIES 6 ENSBIXG00005000080 SBF2 (ENSBIXG00005016555) ENSBIXG00005016647 SWAP70 (ENSBIXG00005016714) WEE1 (ENSBIXG00005016783) ENSBIXG00005016814 ZNF143 (ENSBIXG00005002751) IPO7 (ENSBIXG00005006019) ENSBIXG00005017064 TMEM41B (ENSBIXG00005017095) ENSBIXG00005017135 DENND5A (ENSBIXG00005002794) SCUBE2 (ENSBIXG00005006584) NRIP3 (ENSBIXG00005017604) TMEM9B (ENSBIXG00005017678) ENSBIXG00005017708 #22 ASCL3 (ENSBIXG00005017718) C11orf16 (ENSBIXG00005017732) AKIP1 (ENSBIXG00005007802) DENND2B (ENSBIXG00005018004) ENSBIXG00005018100 TRIM66 (ENSBIXG00005007053) STK33 (ENSBIXG00005002945) LMO1 (ENSBIXG00005018215) RIC3 (ENSBIXG00005018251) TUB (ENSBIXG00005018323) ENSBIXG00005018389 ENSBIXG00005018402 ENSBIXG00005018421 ENSBIXG00005018435 ENSBIXG00005018449 Cow DUPLICATION Cow MODERN SPECIES MCM3AP (ENSBTAG00000003148) #8 LSS (ENSBTAG00000018936) #9 SPATC1L (ENSBTAG00000020409) #10 FTCD (ENSBTAG00000020404) #11 COL6A2 (ENSBTAG00000019269) #12 COL6A1 (ENSBTAG00000011802) ENSBTAG00000048318 PCBP3 (ENSBTAG00000030775) #14 SLC19A1 (ENSBTAG00000024162) #15 COL18A1 (ENSBTAG00000023907) #16 POFUT2 (ENSBTAG00000007818) #17 ADARB1 (ENSBTAG00000017486) #18 SLX9 (ENSBTAG00000017010) #19 ITGB2 (ENSBTAG00000017060) #20 PTTG1IP (ENSBTAG00000021771) #21 SUMO3 (ENSBTAG00000017321) #22 UBE2G2 (ENSBTAG00000048090) #23 ENSBTAG00000050038 ENSBTAG00000051778 KRTAP12-2 (ENSBTAG00000018610) ENSBTAG00000053056 KRTAP10-8 (ENSBTAG00000040291) ENSBTAG00000052773 ENSBTAG00000037662 ENSBTAG00000051900 TSPEAR (ENSBTAG00000018607) LRRC3 (ENSBTAG00000017882) TRPM2 (ENSBTAG00000021901) CFAP410 (ENSBTAG00000019589) PFKL (ENSBTAG00000010658) ENSBTAG00000051579 Cow MODERN SPECIES 6 AMPD3 (ENSBTAG00000015821) ENSBTAG00000051340 ADM (ENSBTAG00000021048) SBF2 (ENSBTAG00000043981) SWAP70 (ENSBTAG00000001987) WEE1 (ENSBTAG00000005278) ZNF143 (ENSBTAG00000016074) ENSBTAG00000045658 IPO7 (ENSBTAG00000027722) ENSBTAG00000027723 TMEM41B (ENSBTAG00000001607) DENND5A (ENSBTAG00000006322) SCUBE2 (ENSBTAG00000020573) NRIP3 (ENSBTAG00000013366) TMEM9B (ENSBTAG00000008310) ENSBTAG00000004771 #22 ASCL3 (ENSBTAG00000032339) C15H11orf16 (ENSBTAG00000001917) AKIP1 (ENSBTAG00000001922) DENND2B (ENSBTAG00000005356) RPL27A (ENSBTAG00000005349) TRIM66 (ENSBTAG00000020890) STK33 (ENSBTAG00000011910) LMO1 (ENSBTAG00000016320) RIC3 (ENSBTAG00000004863) TUB (ENSBTAG00000004862) EIF3F (ENSBTAG00000004861) OR10A3F (ENSBTAG00000055217) OR10A3HP (ENSBTAG00000050520) OR10A3G (ENSBTAG00000053959) OR10A3I (ENSBTAG00000049963) Caprinae ANCESTRAL SPECIES 8 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000163601 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.a.b.c.a.a.a ENSGT00940000161526.b.j.a.b ENSGT00940000163441.f.b.b.c.b ENSGT00940000163441.f.a.b.c.a.b.a.b.a.b.b ENSGT00940000163441.f.a.b.c.a.b.a.a.a.a ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00510000047493.n ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 Goat DUPLICATION Goat MODERN SPECIES 23 TFPI2 (ENSCHIG00000026816) CALCR (ENSCHIG00000012930) VPS50 (ENSCHIG00000012919) HEPACAM2 (ENSCHIG00000008983) ENSCHIG00000012415 SAMD9 (ENSCHIG00000007683) CDK6 (ENSCHIG00000011604) ENSCHIG00000025157 ENSCHIG00000021463 RBM48 (ENSCHIG00000015110) PEX1 (ENSCHIG00000027266) GATAD1 (ENSCHIG00000006633) ENSCHIG00000021464 ANKIB1 (ENSCHIG00000026782) KRIT1 (ENSCHIG00000023971) ENSCHIG00000010640 #22 LRRD1 (ENSCHIG00000018885) CYP51A1 (ENSCHIG00000009890) AKAP9 (ENSCHIG00000015192) MTERF1 (ENSCHIG00000013172) FZD1 (ENSCHIG00000012408) CDK14 (ENSCHIG00000004524) CLDN12 (ENSCHIG00000000615) ENSCHIG00000005960 SUN3 (ENSCHIG00000026852) C7orf57 (ENSCHIG00000013490) UPP1 (ENSCHIG00000014663) ABCA13 (ENSCHIG00000020126) ENSCHIG00000008014 VWC2 (ENSCHIG00000020940) ZPBP (ENSCHIG00000008321) Goat MODERN SPECIES 5 PLEKHF2 (ENSCHIG00000009121) ENSCHIG00000014016 TP53INP1 (ENSCHIG00000009037) CCNE2 (ENSCHIG00000022720) INTS8 (ENSCHIG00000014183) ENSCHIG00000008889 DPY19L4 (ENSCHIG00000020474) ESRP1 (ENSCHIG00000014128) ENSCHIG00000019947 VIRMA (ENSCHIG00000015977) RAD54B (ENSCHIG00000008230) GEM (ENSCHIG00000008651) CDH17 (ENSCHIG00000012379) ENSCHIG00000001629 PDP1 (ENSCHIG00000021127) ENSCHIG00000011909 #22 TMEM67 (ENSCHIG00000015650) RBM12B (ENSCHIG00000006790) ENSCHIG00000023975 ENSCHIG00000015464 TRIQK (ENSCHIG00000008695) RUNX1T1 (ENSCHIG00000014084) SLC26A7 (ENSCHIG00000016301) LRRC69 (ENSCHIG00000016924) PIP4P2 (ENSCHIG00000015234) C8orf88 (ENSCHIG00000011393) TMEM64 (ENSCHIG00000015622) CALB1 (ENSCHIG00000021026) DECR1 (ENSCHIG00000013816) NBN (ENSCHIG00000011173) OSGIN2 (ENSCHIG00000026429) Goat MODERN SPECIES MCM3AP (ENSCHIG00000025098) #8 LSS (ENSCHIG00000013212) #9 SPATC1L (ENSCHIG00000023038) #10 FTCD (ENSCHIG00000010407) #11 COL6A2 (ENSCHIG00000018004) #12 ENSCHIG00000004889 PCBP3 (ENSCHIG00000015841) #14 SLC19A1 (ENSCHIG00000025066) #15 ENSCHIG00000013263 #16 ENSCHIG00000020589 POFUT2 (ENSCHIG00000000514) #17 ADARB1 (ENSCHIG00000018259) #18 SLX9 (ENSCHIG00000017685) #19 ITGB2 (ENSCHIG00000014136) #20 PTTG1IP (ENSCHIG00000021017) #21 ENSCHIG00000015930 #22 UBE2G2 (ENSCHIG00000006556) #23 ENSCHIG00000024813 ENSCHIG00000011506 ENSCHIG00000006780 ENSCHIG00000000533 ENSCHIG00000015017 ENSCHIG00000010601 ENSCHIG00000026079 ENSCHIG00000025434 ENSCHIG00000010344 ENSCHIG00000017373 ENSCHIG00000014533 ENSCHIG00000011548 TSPEAR (ENSCHIG00000017708) LRRC3 (ENSCHIG00000009418) Cetacea ANCESTRAL SPECIES 10 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Blue whale MODERN SPECIES 15 ENSBMSG00010004286 ENSBMSG00010004263 #7 MCM3AP (ENSBMSG00010004232) #8 LSS (ENSBMSG00010004134) #9 FTCD (ENSBMSG00010004051) #11 COL6A2 (ENSBMSG00010004034) #12 COL6A1 (ENSBMSG00010004019) #13 PCBP3 (ENSBMSG00010003986) #14 SLC19A1 (ENSBMSG00010003963) #15 COL18A1 (ENSBMSG00010003836) #16 POFUT2 (ENSBMSG00010003795) #17 ADARB1 (ENSBMSG00010003764) #18 SLX9 (ENSBMSG00010007433) #19 ITGB2 (ENSBMSG00010007391) #20 PTTG1IP (ENSBMSG00010007362) #21 SUMO3 (ENSBMSG00010007354) #22 UBE2G2 (ENSBMSG00010007343) #23 ENSBMSG00010007332 ENSBMSG00010007310 ENSBMSG00010007295 TSPEAR (ENSBMSG00010007281) LRRC3 (ENSBMSG00010007273) TRPM2 (ENSBMSG00010007233) CFAP410 (ENSBMSG00010007203) PFKL (ENSBMSG00010007189) AIRE (ENSBMSG00010007103) DNMT3L (ENSBMSG00010007028) ICOSLG (ENSBMSG00010006991) GATD3 (ENSBMSG00010006949) PWP2 (ENSBMSG00010006911) TRAPPC10 (ENSBMSG00010006876) Odontoceti ANCESTRAL SPECIES 9 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162768.B ENSGT00940000163601 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Sperm whale MODERN SPECIES 19 PDE9A (ENSPCTG00005012834) HSF2BP (ENSPCTG00005014642) RRP1B (ENSPCTG00005014769) PDXK (ENSPCTG00005014904) CSTB (ENSPCTG00005015015) U2AF1 (ENSPCTG00005015178) CRYAA (ENSPCTG00005015249) AGPAT3 (ENSPCTG00005015313) TRAPPC10 (ENSPCTG00005015440) PWP2 (ENSPCTG00005015641) GATD3A (ENSPCTG00005015921) ICOSLG (ENSPCTG00005016088) DNMT3L (ENSPCTG00005016240) AIRE (ENSPCTG00005016581) PFKL (ENSPCTG00005017230) SUMO3 (ENSPCTG00005017367) #22 UBE2G2 (ENSPCTG00005017422) #23 TSPEAR (ENSPCTG00005017485) ENSPCTG00005017543 ENSPCTG00005017608 LRRC3 (ENSPCTG00005017660) ENSPCTG00005017676 ENSPCTG00005017771 ITGB2 (ENSPCTG00005017857) #20 ADARB1 (ENSPCTG00005017937) #18 POFUT2 (ENSPCTG00005017994) #17 SLC19A1 (ENSPCTG00005019281) #15 PCBP3 (ENSPCTG00005019331) #14 COL6A1 (ENSPCTG00005019551) COL6A2 (ENSPCTG00005020074) #12 FTCD (ENSPCTG00005020224) #11 Odontoceti_a ANCESTRAL SPECIES 8 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162768.B ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Odontoceti_b ANCESTRAL SPECIES 9 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162768.B ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Monodontidae ANCESTRAL SPECIES 11 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162768.B ENSGT00940000163601 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Narwhal DUPLICATION Narwhal MODERN SPECIES 297 LSS (ENSMMNG00015000081) #9 SPATC1L (ENSMMNG00015000171) #10 FTCD (ENSMMNG00015000207) #11 COL6A2 (ENSMMNG00015000293) #12 ENSMMNG00015000354 ENSMMNG00015000368 ENSMMNG00015000412 PCBP3 (ENSMMNG00015000534) #14 SLC19A1 (ENSMMNG00015000587) #15 ENSMMNG00015000658 POFUT2 (ENSMMNG00015000876) #17 ADARB1 (ENSMMNG00015001009) #18 SLX9 (ENSMMNG00015001036) #19 ITGB2 (ENSMMNG00015001076) #20 PTTG1IP (ENSMMNG00015001159) #21 SUMO3 (ENSMMNG00015001196) #22 UBE2G2 (ENSMMNG00015001235) #23 TSPEAR (ENSMMNG00015001273) TRPM2 (ENSMMNG00015001381) CFAP410 (ENSMMNG00015001497) PFKL (ENSMMNG00015001526) AIRE (ENSMMNG00015001730) DNMT3L (ENSMMNG00015001913) ICOSLG (ENSMMNG00015001974) ENSMMNG00015002030 PWP2 (ENSMMNG00015002118) TRAPPC10 (ENSMMNG00015002229) AGPAT3 (ENSMMNG00015002330) RRP1 (ENSMMNG00015002366) CSTB (ENSMMNG00015002400) PDXK (ENSMMNG00015002424) Narwhal MODERN SPECIES 311 COL13A1 (ENSMMNG00015019392) FAM241B (ENSMMNG00015018581) NEUROG3 (ENSMMNG00015018559) TSPAN15 (ENSMMNG00015018513) TACR2 (ENSMMNG00015018482) HK1 (ENSMMNG00015018338) HKDC1 (ENSMMNG00015018235) SUPV3L1 (ENSMMNG00015018179) ENSMMNG00015018123 SRGN (ENSMMNG00015018086) KIFBP (ENSMMNG00015018048) DDX21 (ENSMMNG00015017919) DDX50 (ENSMMNG00015017887) ENSMMNG00015017869 STOX1 (ENSMMNG00015017814) ENSMMNG00015017786 #22 CCAR1 (ENSMMNG00015017705) ENSMMNG00015017672 TET1 (ENSMMNG00015017620) SLC25A16 (ENSMMNG00015017583) DNA2 (ENSMMNG00015017542) RUFY2 (ENSMMNG00015017154) HNRNPH3 (ENSMMNG00015017060) PBLD (ENSMMNG00015017026) MYPN (ENSMMNG00015016802) HERC4 (ENSMMNG00015016513) SIRT1 (ENSMMNG00015016378) DNAJC12 (ENSMMNG00015016250) LRRTM3 (ENSMMNG00015016206) CTNNA3 (ENSMMNG00015016145) ENSMMNG00015016066 Beluga whale DUPLICATION Beluga whale MODERN SPECIES 26 SAP30BP (ENSDLEG00000006870) RECQL5 (ENSDLEG00000006875) SMIM5 (ENSDLEG00000006889) ENSDLEG00000006899 ENSDLEG00000006941 LLGL2 (ENSDLEG00000006955) TSEN54 (ENSDLEG00000007044) CASKIN2 (ENSDLEG00000007101) TMEM94 (ENSDLEG00000007244) GRB2 (ENSDLEG00000007603) ENSDLEG00000007607 MIF4GD (ENSDLEG00000007609) MRPS7 (ENSDLEG00000007613) GGA3 (ENSDLEG00000007697) NUP85 (ENSDLEG00000009671) ENSDLEG00000010267 #22 JPT1 (ENSDLEG00000010301) NT5C (ENSDLEG00000010315) ARMC7 (ENSDLEG00000010329) SLC16A5 (ENSDLEG00000010349) ENSDLEG00000010366 ATP5H (ENSDLEG00000010375) MRPL58 (ENSDLEG00000010388) CDR2L (ENSDLEG00000010398) HID1 (ENSDLEG00000010418) OTOP3 (ENSDLEG00000010598) OTOP2 (ENSDLEG00000010663) USH1G (ENSDLEG00000010675) FADS6 (ENSDLEG00000010697) FDXR (ENSDLEG00000010749) GRIN2C (ENSDLEG00000010808) Beluga whale MODERN SPECIES 65 COL13A1 (ENSDLEG00000008033) FAM241B (ENSDLEG00000008202) NEUROG3 (ENSDLEG00000008229) TSPAN15 (ENSDLEG00000008241) TACR2 (ENSDLEG00000008300) HK1 (ENSDLEG00000008408) HKDC1 (ENSDLEG00000008490) SUPV3L1 (ENSDLEG00000008552) ENSDLEG00000008599 SRGN (ENSDLEG00000008630) KIFBP (ENSDLEG00000008645) DDX21 (ENSDLEG00000008677) DDX50 (ENSDLEG00000008715) ENSDLEG00000008782 STOX1 (ENSDLEG00000008804) ENSDLEG00000008946 #22 CCAR1 (ENSDLEG00000008968) TET1 (ENSDLEG00000009112) ENSDLEG00000009139 SLC25A16 (ENSDLEG00000009240) RUFY2 (ENSDLEG00000010171) HNRNPH3 (ENSDLEG00000011376) PBLD (ENSDLEG00000011403) ATOH7 (ENSDLEG00000011420) MYPN (ENSDLEG00000011459) HERC4 (ENSDLEG00000011906) SIRT1 (ENSDLEG00000011987) ENSDLEG00000012197 ENSDLEG00000012205 ENSDLEG00000012216 ENSDLEG00000012231 Vaquita DUPLICATION Vaquita MODERN SPECIES 15 MCM3AP (ENSPSNG00000015503) #8 LSS (ENSPSNG00000015377) #9 SPATC1L (ENSPSNG00000015232) #10 FTCD (ENSPSNG00000014870) #11 COL6A2 (ENSPSNG00000014738) #12 COL6A1 (ENSPSNG00000014616) #13 ENSPSNG00000014382 SLC19A1 (ENSPSNG00000014338) #15 COL18A1 (ENSPSNG00000013985) #16 POFUT2 (ENSPSNG00000013804) #17 ADARB1 (ENSPSNG00000013670) #18 SLX9 (ENSPSNG00000013591) #19 ENSPSNG00000013509 ENSPSNG00000013374 ##20 PTTG1IP (ENSPSNG00000013293) #21 SUMO3 (ENSPSNG00000013255) #22 UBE2G2 (ENSPSNG00000013185) #23 TSPEAR (ENSPSNG00000012864) LRRC3 (ENSPSNG00000012828) TRPM2 (ENSPSNG00000012233) CFAP410 (ENSPSNG00000012160) PFKL (ENSPSNG00000012080) AIRE (ENSPSNG00000011555) DNMT3L (ENSPSNG00000011244) ICOSLG (ENSPSNG00000010983) GATD3 (ENSPSNG00000010801) PWP2 (ENSPSNG00000010734) TRAPPC10 (ENSPSNG00000010640) AGPAT3 (ENSPSNG00000010576) RRP1 (ENSPSNG00000010522) ENSPSNG00000010486 Vaquita MODERN SPECIES 7 MACROH2A2 (ENSPSNG00000020131) COL13A1 (ENSPSNG00000019849) FAM241B (ENSPSNG00000019661) NEUROG3 (ENSPSNG00000019648) TSPAN15 (ENSPSNG00000019618) TACR2 (ENSPSNG00000019582) HK1 (ENSPSNG00000019292) HKDC1 (ENSPSNG00000019172) SUPV3L1 (ENSPSNG00000019123) VPS26A (ENSPSNG00000019043) SRGN (ENSPSNG00000019006) KIFBP (ENSPSNG00000018956) DDX21 (ENSPSNG00000018882) DDX50 (ENSPSNG00000018841) STOX1 (ENSPSNG00000018733) ENSPSNG00000018685 #22 CCAR1 (ENSPSNG00000018574) ENSPSNG00000018517 TET1 (ENSPSNG00000018401) DNA2 (ENSPSNG00000018291) RUFY2 (ENSPSNG00000018016) HNRNPH3 (ENSPSNG00000017903) PBLD (ENSPSNG00000017813) ATOH7 (ENSPSNG00000017790) MYPN (ENSPSNG00000017208) HERC4 (ENSPSNG00000016699) SIRT1 (ENSPSNG00000016409) ENSPSNG00000016344 DNAJC12 (ENSPSNG00000016132) LRRTM3 (ENSPSNG00000016050) CTNNA3 (ENSPSNG00000015816) Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000163845 #30 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Carnivora ANCESTRAL SPECIES 10 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 ENSGT00940000163441.f.b.a.a ENSGT00940000163441.f.a.a.b ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Felidae ANCESTRAL SPECIES 9 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.b.a.a.c ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Panthera ANCESTRAL SPECIES 17 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.b.a.a.c ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Panthera_a ANCESTRAL SPECIES 71 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.b.a.a.c leopard MODERN SPECIES 167 DIP2A (ENSPPRG00000023404) YBEY (ENSPPRG00000003325) #7 MCM3AP (ENSPPRG00000006018) #8 LSS (ENSPPRG00000008675) #9 SPATC1L (ENSPPRG00000008783) #10 FTCD (ENSPPRG00000011402) #11 COL6A2 (ENSPPRG00000024558) #12 COL6A1 (ENSPPRG00000000566) #13 PCBP3 (ENSPPRG00000003933) #14 SLC19A1 (ENSPPRG00000004605) #15 POFUT2 (ENSPPRG00000010612) #17 ADARB1 (ENSPPRG00000012281) #18 SLX9 (ENSPPRG00000012813) #19 ITGB2 (ENSPPRG00000001670) #20 PTTG1IP (ENSPPRG00000001982) #21 SUMO3 (ENSPPRG00000002862) #22 UBE2G2 (ENSPPRG00000003006) #23 ENSPPRG00000003469 Caniformia ANCESTRAL SPECIES ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.a ENSGT00940000163441.f.b.a.a.a ENSGT00940000163441.f.b.a.a.b ENSGT00940000163441.f.a.a.b ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 Canidae ANCESTRAL SPECIES 39 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.i #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Canis_lupus ANCESTRAL SPECIES 38 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.i #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.a.a.b.a ENSGT00940000161526.a.c ENSGT00940000161526.a.d ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Dog MODERN SPECIES 24 ENSCAFG00845026433 #7 MCM3AP (ENSCAFG00845025335) #8 LSS (ENSCAFG00845024919) #9 SPATC1L (ENSCAFG00845024849) #10 FTCD (ENSCAFG00845024727) #11 COL6A2 (ENSCAFG00845024255) #12 COL6A1 (ENSCAFG00845024031) #13 PCBP3 (ENSCAFG00845023560) #14 ENSCAFG00845023388 #15 COL18A1 (ENSCAFG00845022231) #16 POFUT2 (ENSCAFG00845022063) #17 ADARB1 (ENSCAFG00845021975) #18 SLX9 (ENSCAFG00845021885) #19 ITGB2 (ENSCAFG00845021592) #20 PTTG1IP (ENSCAFG00845021456) #21 ENSCAFG00845021390 #22 UBE2G2 (ENSCAFG00845021306) #23 ENSCAFG00845021222 ENSCAFG00845021169 ENSCAFG00845021000 ENSCAFG00845020843 TSPEAR (ENSCAFG00845020761) TRPM2 (ENSCAFG00845020419) ICOSLG (ENSCAFG00845020326) PFKL (ENSCAFG00845020069) AIRE (ENSCAFG00845019838) DNMT3L (ENSCAFG00845019683) ICOSLG (ENSCAFG00845019541) GATD3 (ENSCAFG00845019382) PWP2 (ENSCAFG00845019135) TRAPPC10 (ENSCAFG00845018939) Caniformia_b ANCESTRAL SPECIES ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Mustelinae ANCESTRAL SPECIES 67 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 American mink MODERN SPECIES 122 LSS (ENSNVIG00000008849) #9 SPATC1L (ENSNVIG00000008811) #10 FTCD (ENSNVIG00000008760) #11 ENSNVIG00000008753 #12 COL6A1 (ENSNVIG00000008572) #13 PCBP3 (ENSNVIG00000008330) #14 ENSNVIG00000008290 ENSNVIG00000008255 #16 ENSNVIG00000008220 #17 ENSNVIG00000008211 #17 ENSNVIG00000008191 #17 ADARB1 (ENSNVIG00000008112) #18 SLX9 (ENSNVIG00000008023) #19 ITGB2 (ENSNVIG00000007863) #20 PTTG1IP (ENSNVIG00000007848) #21 SUMO3 (ENSNVIG00000007817) #22 UBE2G2 (ENSNVIG00000007799) #23 ENSNVIG00000007785 ENSNVIG00000007773 ENSNVIG00000007725 #30 TSPEAR (ENSNVIG00000007674) LRRC3 (ENSNVIG00000007665) TRPM2 (ENSNVIG00000007475) ENSNVIG00000007455 PFKL (ENSNVIG00000007397) AIRE (ENSNVIG00000007211) ENSNVIG00000007199 ICOSLG (ENSNVIG00000007190) GATD3 (ENSNVIG00000007184) PWP2 (ENSNVIG00000007096) TRAPPC10 (ENSNVIG00000007089) Ferret DUPLICATION Ferret MODERN SPECIES 248 SLC19A1 (ENSMPUG00000010396) #15 ENSMPUG00000010382 ENSMPUG00000019068 COL18A1 (ENSMPUG00000010362) #16 ENSMPUG00000010360 ENSMPUG00000010357 POFUT2 (ENSMPUG00000010302) #17 ADARB1 (ENSMPUG00000010296) #18 ENSMPUG00000010290 SLX9 (ENSMPUG00000010279) #19 ITGB2 (ENSMPUG00000010269) #20 PTTG1IP (ENSMPUG00000010248) #21 ENSMPUG00000010234 #22 UBE2G2 (ENSMPUG00000010187) #23 ENSMPUG00000019067 TSPEAR (ENSMPUG00000010176) LRRC3 (ENSMPUG00000019066) TRPM2 (ENSMPUG00000010155) CFAP410 (ENSMPUG00000010108) PFKL (ENSMPUG00000010091) AIRE (ENSMPUG00000010031) ENSMPUG00000010029 DNMT3L (ENSMPUG00000010003) ICOSLG (ENSMPUG00000009996) GATD3 (ENSMPUG00000009943) PWP2 (ENSMPUG00000009936) TRAPPC10 (ENSMPUG00000009927) AGPAT3 (ENSMPUG00000009918) Ferret MODERN SPECIES 186 GALK1 (ENSMPUG00000013819) ITGB4 (ENSMPUG00000013821) SAP30BP (ENSMPUG00000013829) RECQL5 (ENSMPUG00000013833) ENSMPUG00000013837 LLGL2 (ENSMPUG00000013865) TSEN54 (ENSMPUG00000013870) CASKIN2 (ENSMPUG00000013874) TMEM94 (ENSMPUG00000013877) GRB2 (ENSMPUG00000013882) SLC25A19 (ENSMPUG00000013885) MIF4GD (ENSMPUG00000013909) MRPS7 (ENSMPUG00000013928) GGA3 (ENSMPUG00000013944) NUP85 (ENSMPUG00000013951) ENSMPUG00000013954 #22 JPT1 (ENSMPUG00000013971) NT5C (ENSMPUG00000013985) ARMC7 (ENSMPUG00000013987) SLC16A5 (ENSMPUG00000013991) ENSMPUG00000019916 ENSMPUG00000014018 KCTD2 (ENSMPUG00000014024) ENSMPUG00000014048 ENSMPUG00000014083 MRPL58 (ENSMPUG00000014086) CDR2L (ENSMPUG00000014096) HID1 (ENSMPUG00000014100) OTOP3 (ENSMPUG00000014106) ENSMPUG00000014110 ENSMPUG00000014114 Ursidae ANCESTRAL SPECIES 1 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000161526.a.a ENSGT00940000163441.f.b.a.a.a.c ENSGT00940000163441.f.b.a.a.b ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a.cb ENSGT00550000074981 ENSGT00390000003873 Ursus ANCESTRAL SPECIES 94 ENSGT00950000182997.a.b.b.a.m ENSGT00730000110871.a.a.a.b ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00950000183546 ENSGT00940000162185 #14 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000161526.a.a ENSGT00940000163441.f.a.a.b ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292.a ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a.cb ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Polar bear DUPLICATION Polar bear MODERN SPECIES 185 ITGB4 (ENSUMAG00000009253) SAP30BP (ENSUMAG00000009122) ENSUMAG00000009118 RECQL5 (ENSUMAG00000009115) ENSUMAG00000009111 LLGL2 (ENSUMAG00000009023) TSEN54 (ENSUMAG00000008979) ENSUMAG00000008973 TMEM94 (ENSUMAG00000008703) GRB2 (ENSUMAG00000008668) SLC25A19 (ENSUMAG00000008660) MIF4GD (ENSUMAG00000008655) MRPS7 (ENSUMAG00000008652) GGA3 (ENSUMAG00000008648) NUP85 (ENSUMAG00000008643) ENSUMAG00000008640 #22 JPT1 (ENSUMAG00000008637) NT5C (ENSUMAG00000008633) ARMC7 (ENSUMAG00000008632) SLC16A5 (ENSUMAG00000008628) ENSUMAG00000008623 ENSUMAG00000008620 ENSUMAG00000008615 ATP5PD (ENSUMAG00000008611) MRPL58 (ENSUMAG00000008604) CDR2L (ENSUMAG00000008589) HID1 (ENSUMAG00000008253) OTOP3 (ENSUMAG00000008210) ENSUMAG00000008202 ENSUMAG00000008197 FADS6 (ENSUMAG00000008188) Polar bear MODERN SPECIES 394 DIP2A (ENSUMAG00000025037) PCNT (ENSUMAG00000025235) YBEY (ENSUMAG00000025236) #7 MCM3AP (ENSUMAG00000025237) #8 LSS (ENSUMAG00000025396) #9 ENSUMAG00000025397 #10 FTCD (ENSUMAG00000025398) #11 COL6A2 (ENSUMAG00000025399) #12 ENSUMAG00000025402 PCBP3 (ENSUMAG00000025403) #14 POFUT2 (ENSUMAG00000025410) #17 ADARB1 (ENSUMAG00000025411) #18 SLX9 (ENSUMAG00000025416) #19 ITGB2 (ENSUMAG00000025417) #20 PTTG1IP (ENSUMAG00000025418) #21 ENSUMAG00000025419 #22 UBE2G2 (ENSUMAG00000025420) #23 ENSUMAG00000025421 ENSUMAG00000025422 ENSUMAG00000025423 ENSUMAG00000025425 TSPEAR (ENSUMAG00000025426) LRRC3 (ENSUMAG00000025427) TRPM2 (ENSUMAG00000025428) ENSUMAG00000025469 PFKL (ENSUMAG00000025470) ENSUMAG00000025471 ICOSLG (ENSUMAG00000025473) GATD3 (ENSUMAG00000025476) PWP2 (ENSUMAG00000025481) TRAPPC10 (ENSUMAG00000025503) Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b #7 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000163845 #30 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Equus ANCESTRAL SPECIES 42 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000163845 #30 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Donkey MODERN SPECIES 9 SPATC1L (ENSEASG00005007013) #10 FTCD (ENSEASG00005007018) #11 COL6A2 (ENSEASG00005007037) #12 COL6A1 (ENSEASG00005035660) #13 PCBP3 (ENSEASG00005007068) #14 SLC19A1 (ENSEASG00005007070) #15 COL18A1 (ENSEASG00005038430) #16 POFUT2 (ENSEASG00005007081) #17 ADARB1 (ENSEASG00005007085) #18 SLX9 (ENSEASG00005023956) #19 ENSEASG00005032799 #20 ENSEASG00005020183 #20 ENSEASG00005018136 #20 ENSEASG00005036911 #20 PTTG1IP (ENSEASG00005034537) #21 ENSEASG00005025870 #22 UBE2G2 (ENSEASG00005037598) #23 ENSEASG00005000235 ENSEASG00005026028 #24 ENSEASG00005026444 ENSEASG00005025990 ENSEASG00005032600 ENSEASG00005014722 ENSEASG00005037300 ENSEASG00005026527 #24 ENSEASG00005033364 #28 ENSEASG00005035707 TRPM2 (ENSEASG00005000375) CFAP410 (ENSEASG00005001598) PFKL (ENSEASG00005001615) AIRE (ENSEASG00005001620) Horse MODERN SPECIES 18 ENSECAG00000047281 LSS (ENSECAG00000008899) #9 SPATC1L (ENSECAG00000006870) #10 FTCD (ENSECAG00000011979) #11 COL6A2 (ENSECAG00000019436) #12 COL6A1 (ENSECAG00000022731) #13 ENSECAG00000047101 PCBP3 (ENSECAG00000012413) #14 SLC19A1 (ENSECAG00000002116) #15 COL18A1 (ENSECAG00000016361) #16 POFUT2 (ENSECAG00000004992) #17 ADARB1 (ENSECAG00000019917) #18 SLX9 (ENSECAG00000016590) #19 ITGB2 (ENSECAG00000023061) #20 PTTG1IP (ENSECAG00000022770) #21 ENSECAG00000021271 #22 UBE2G2 (ENSECAG00000015327) #23 ENSECAG00000049876 ENSECAG00000015092 ENSECAG00000047135 ENSECAG00000015117 ENSECAG00000051879 #28 ENSECAG00000051909 #24 ENSECAG00000029396 #30 TSPEAR (ENSECAG00000051756) LRRC3 (ENSECAG00000005082) TSPEAR (ENSECAG00000008057) TRPM2 (ENSECAG00000023430) PFKL (ENSECAG00000017863) AIRE (ENSECAG00000012924) DNMT3L (ENSECAG00000009690) Chiroptera ANCESTRAL SPECIES 35 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162768.B ENSGT00960000191015 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.a.a.b ENSGT00940000163441.f.b.b ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Megabat MODERN SPECIES 2785 SUMO3 (ENSPVAG00000015248) #22 Microchiroptera ANCESTRAL SPECIES 37 ENSGT00940000156322 #8 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162768.B ENSGT00960000191015 ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.a.a.b ENSGT00940000163441.f.b.b ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Greater horseshoe bat MODERN SPECIES 11 ENSRFEG00010001831 #11 COL6A2 (ENSRFEG00010001753) #12 COL6A1 (ENSRFEG00010001707) #13 ENSRFEG00010001629 ENSRFEG00010001580 ENSRFEG00010001565 SLC19A1 (ENSRFEG00010001553) #15 ENSRFEG00010001539 #16 ENSRFEG00010001505 #17 ENSRFEG00010001475 #17 ENSRFEG00010001456 ADARB1 (ENSRFEG00010001412) #18 SLX9 (ENSRFEG00010001351) #19 ITGB2 (ENSRFEG00010001275) #20 PTTG1IP (ENSRFEG00010001246) #21 SUMO3 (ENSRFEG00010001215) #22 UBE2G2 (ENSRFEG00010001187) #23 ENSRFEG00010001158 ENSRFEG00010001114 ENSRFEG00010001026 TSPEAR (ENSRFEG00010000980) LRRC3 (ENSRFEG00010000940) TRPM2 (ENSRFEG00010000872) CFAP410 (ENSRFEG00010000827) PFKL (ENSRFEG00010000776) AIRE (ENSRFEG00010000735) DNMT3L (ENSRFEG00010000669) ICOSLG (ENSRFEG00010000645) GATD3 (ENSRFEG00010000628) PWP2 (ENSRFEG00010000602) TRAPPC10 (ENSRFEG00010000559) Microbat DUPLICATION Microbat MODERN SPECIES 1228 ENSMLUG00000013364 PCBP3 (ENSMLUG00000003074) #14 SLC19A1 (ENSMLUG00000015818) #15 COL18A1 (ENSMLUG00000015768) #16 ENSMLUG00000025632 POFUT2 (ENSMLUG00000013242) #17 ADARB1 (ENSMLUG00000011328) #18 SLX9 (ENSMLUG00000017651) #19 ITGB2 (ENSMLUG00000003153) #20 PTTG1IP (ENSMLUG00000003464) #21 ENSMLUG00000028601 #22 UBE2G2 (ENSMLUG00000011264) #23 ENSMLUG00000011524 ENSMLUG00000010897 ENSMLUG00000017019 TSPEAR (ENSMLUG00000011225) LRRC3 (ENSMLUG00000011171) TRPM2 (ENSMLUG00000011096) CFAP410 (ENSMLUG00000011059) PFKL (ENSMLUG00000010992) ENSMLUG00000010968 DNMT3L (ENSMLUG00000013954) GATD3 (ENSMLUG00000004837) PWP2 (ENSMLUG00000004823) TRAPPC10 (ENSMLUG00000004810) AGPAT3 (ENSMLUG00000004785) Microbat MODERN SPECIES 1419 GALK1 (ENSMLUG00000015425) ITGB4 (ENSMLUG00000015402) SAP30BP (ENSMLUG00000015391) RECQL5 (ENSMLUG00000015374) ENSMLUG00000015365 LLGL2 (ENSMLUG00000015307) TSEN54 (ENSMLUG00000015298) CASKIN2 (ENSMLUG00000015284) TMEM94 (ENSMLUG00000015265) GRB2 (ENSMLUG00000015262) SLC25A19 (ENSMLUG00000015251) MIF4GD (ENSMLUG00000015242) MRPS7 (ENSMLUG00000015237) GGA3 (ENSMLUG00000015225) NUP85 (ENSMLUG00000015211) ENSMLUG00000025342 #22 JPT1 (ENSMLUG00000015205) NT5C (ENSMLUG00000015199) ARMC7 (ENSMLUG00000012851) SLC16A5 (ENSMLUG00000012847) ENSMLUG00000030452 KCTD2 (ENSMLUG00000012842) ATP5PD (ENSMLUG00000010620) MRPL58 (ENSMLUG00000006752) HID1 (ENSMLUG00000003519) Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Carnivora ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Caniformia ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Caniformia_b ANCESTRAL SPECIES 20 ENSGT01100000263555.b ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.i.a ##22 ENSGT00940000164037 ENSGT00950000182895.a.a.a.a.b ##22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000162951 ENSGT00940000158336 ENSGT00390000003582.r ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b Ursidae ANCESTRAL SPECIES 19 ENSGT01100000263555.b ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.i.a ##22 ENSGT00940000164037 ENSGT00950000182895.a.a.a.a.b ##22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000162951 ENSGT00940000158336 ENSGT00390000003582.r ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b Giant Panda MODERN SPECIES 4 ITGB4 (ENSAMEG00000009619) SAP30BP (ENSAMEG00000009518) SMIM5 (ENSAMEG00000009617) RECQL5 (ENSAMEG00000009566) MYO15B (ENSAMEG00000027824) LLGL2 (ENSAMEG00000009430) TSEN54 (ENSAMEG00000009414) CASKIN2 (ENSAMEG00000009400) TMEM94 (ENSAMEG00000009346) GRB2 (ENSAMEG00000009339) SLC25A19 (ENSAMEG00000009328) MIF4GD (ENSAMEG00000009313) MRPS7 (ENSAMEG00000009287) GGA3 (ENSAMEG00000009242) NUP85 (ENSAMEG00000009192) ENSAMEG00000030788 ##22 ENSAMEG00000009184 ENSAMEG00000009175 SLC16A5 (ENSAMEG00000009160) ENSAMEG00000009143 ENSAMEG00000024925 ATP5PD (ENSAMEG00000009115) MRPL58 (ENSAMEG00000027504) CDR2L (ENSAMEG00000025577) HID1 (ENSAMEG00000009062) OTOP3 (ENSAMEG00000009052) USH1G (ENSAMEG00000009036) ENSAMEG00000026196 ENSAMEG00000008997 ENSAMEG00000031052 ENSAMEG00000025104 Artiodactyla ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Artiodactyla_a ANCESTRAL SPECIES 3 ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00940000155335 ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.i.a ##22 ENSGT01070000255137 ENSGT00950000182895.a.a.a.a.a.a.a ##22 ENSGT00940000164037 ENSGT00510000055459 ENSGT00950000182895.a.a.a.a.b ##22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000162951 ENSGT00940000158336 ENSGT00390000003582 ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 Artiodactyla_b ANCESTRAL SPECIES 3 ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00940000155335 ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.i.a ##22 ENSGT01070000255137 ENSGT00950000182895.a.a.a.a.a.a.a ##22 ENSGT00940000164037 ENSGT00510000055459 ENSGT00950000182895.a.a.a.a.b ##22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000162951 ENSGT00940000158336 ENSGT00390000003582 ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 Pecora ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Percora_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Bovidae ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Bovinae ANCESTRAL SPECIES ENSGT01100000263555.b ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.i.a ##22 ENSGT00950000182895.a.a.a.a.a.a.a ##22 ENSGT00940000164037 ENSGT00950000182895.a.a.a.a.a.a.b.a.a ##22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000162951 ENSGT00390000003582.p ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b American bison MODERN SPECIES 3285 ITGB4 (ENSBBBG00000005640) SAP30BP (ENSBBBG00000021035) SMIM5 (ENSBBBG00000021056) RECQL5 (ENSBBBG00000021117) MYO15B (ENSBBBG00000021484) LLGL2 (ENSBBBG00000021610) TSEN54 (ENSBBBG00000021631) CASKIN2 (ENSBBBG00000021684) TMEM94 (ENSBBBG00000021836) GRB2 (ENSBBBG00000005799) SLC25A19 (ENSBBBG00000021969) ENSBBBG00000021980 MRPS7 (ENSBBBG00000022001) GGA3 (ENSBBBG00000022100) NUP85 (ENSBBBG00000022127) ENSBBBG00000022135 ##22 ENSBBBG00000022173 ENSBBBG00000005852 ENSBBBG00000022193 SLC16A5 (ENSBBBG00000022204) ENSBBBG00000022217 ENSBBBG00000022243 ATP5PD (ENSBBBG00000005864) MRPL58 (ENSBBBG00000022261) CDR2L (ENSBBBG00000022283) HID1 (ENSBBBG00000005873) ENSBBBG00000005884 ENSBBBG00000005885 USH1G (ENSBBBG00000022331) ENSBBBG00000005892 FADS6 (ENSBBBG00000022340) Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Glires ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Rodentia ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Sciuridae ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Marmotini ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Alpin marmot MODERN SPECIES 1 IPO4 (ENSMMMG00000012109) REC8 (ENSMMMG00000012150) IRF9 (ENSMMMG00000012177) RNF31 (ENSMMMG00000012192) PSME2 (ENSMMMG00000012264) EMC9 (ENSMMMG00000012288) PSME1 (ENSMMMG00000012296) FITM1 (ENSMMMG00000012384) DCAF11 (ENSMMMG00000012392) PCK2 (ENSMMMG00000012681) NRL (ENSMMMG00000012717) CPNE6 (ENSMMMG00000012724) CARMIL3 (ENSMMMG00000012792) ENSMMMG00000012839 DHRS2 (ENSMMMG00000012876) ENSMMMG00000013059 ##22 ENSMMMG00000013062 JPH4 (ENSMMMG00000013123) AP1G2 (ENSMMMG00000013142) THTPA (ENSMMMG00000013179) ZFHX2 (ENSMMMG00000013186) NGDN (ENSMMMG00000013200) MYH7 (ENSMMMG00000013220) ENSMMMG00000013308 CMTM5 (ENSMMMG00000013324) IL25 (ENSMMMG00000013338) EFS (ENSMMMG00000013356) SLC22A17 (ENSMMMG00000013391) PABPN1 (ENSMMMG00000013456) BCL2L2 (ENSMMMG00000013458) PPP1R3E (ENSMMMG00000013472) Laurasiatheria ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Carnivora ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Caniformia ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Ursidae ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Giant Panda MODERN SPECIES SPICE1 (ENSAMEG00000005162) SIDT1 (ENSAMEG00000005184) USF3 (ENSAMEG00000005235) NAA50 (ENSAMEG00000005243) ATP6V1A (ENSAMEG00000005255) GRAMD1C (ENSAMEG00000005286) ZDHHC23 (ENSAMEG00000005320) CCDC191 (ENSAMEG00000005336) QTRT2 (ENSAMEG00000005349) DRD3 (ENSAMEG00000005377) TIGIT (ENSAMEG00000005401) ZBTB20 (ENSAMEG00000005407) GAP43 (ENSAMEG00000029486) ENSAMEG00000005712 LSAMP (ENSAMEG00000005718) ENSAMEG00000009189 ##22 IGSF11 (ENSAMEG00000007326) ENSAMEG00000026121 UPK1B (ENSAMEG00000007300) B4GALT4 (ENSAMEG00000007283) ARHGAP31 (ENSAMEG00000007278) TMEM39A (ENSAMEG00000007256) POGLUT1 (ENSAMEG00000007227) TIMMDC1 (ENSAMEG00000007212) CD80 (ENSAMEG00000007201) ADPRH (ENSAMEG00000027500) PLA1A (ENSAMEG00000007170) POPDC2 (ENSAMEG00000007148) COX17 (ENSAMEG00000029657) CFAP91 (ENSAMEG00000007087) NR1I2 (ENSAMEG00000007006) Boreoeutheria ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.b ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.b ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.b ##22 Glires ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.b ##22 Rodentia ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.b ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.b ##22 Sciuridae ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.b ##22 Marmotini ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.b ##22 Alpin marmot MODERN SPECIES FOXA2 (ENSMMMG00000004350) PAX1 (ENSMMMG00000004326) NKX2-2 (ENSMMMG00000004284) XRN2 (ENSMMMG00000004161) KIZ (ENSMMMG00000003881) ENSMMMG00000003871 RALGAPA2 (ENSMMMG00000003453) ENSMMMG00000003417 ENSMMMG00000003408 ENSMMMG00000003290 CRNKL1 (ENSMMMG00000003244) NAA20 (ENSMMMG00000003240) RIN2 (ENSMMMG00000003172) SLC24A3 (ENSMMMG00000003105) SCP2D1 (ENSMMMG00000003079) ENSMMMG00000003073 ##22 DTD1 (ENSMMMG00000003060) SMIM26 (ENSMMMG00000003045) SEC23B (ENSMMMG00000003024) RBBP9 (ENSMMMG00000003013) POLR3F (ENSMMMG00000002996) DZANK1 (ENSMMMG00000002954) ZNF133 (ENSMMMG00000002935) KAT14 (ENSMMMG00000002887) OVOL2 (ENSMMMG00000002853) MGME1 (ENSMMMG00000002827) SNX5 (ENSMMMG00000002770) BANF2 (ENSMMMG00000002735) RRBP1 (ENSMMMG00000002621) DSTN (ENSMMMG00000002604) BFSP1 (ENSMMMG00000002526) Atlantogenata ANCESTRAL SPECIES 92 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00940000158579 #35 ENSGT00940000163845 #30 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Afrotheria ANCESTRAL SPECIES 109 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00940000158579 #35 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Afrotheria_a ANCESTRAL SPECIES 115 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00940000158579 #35 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00940000161104 ENSGT00940000162228 ENSGT00940000161590 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Elephant MODERN SPECIES 513 ITGB2 (ENSLAFG00000028448) #20 PTTG1IP (ENSLAFG00000016707) #21 SUMO3 (ENSLAFG00000001967) #22 UBE2G2 (ENSLAFG00000001963) #23 ENSLAFG00000032616 #35 ENSLAFG00000003471 ENSLAFG00000012968 #35 ENSLAFG00000020961 #35 TSPEAR (ENSLAFG00000012959) LRRC3 (ENSLAFG00000005181) TRPM2 (ENSLAFG00000007900) CFAP410 (ENSLAFG00000000609) PFKL (ENSLAFG00000021471) AIRE (ENSLAFG00000008582) DNMT3L (ENSLAFG00000031621) ENSLAFG00000016007 GATD3 (ENSLAFG00000003876) PWP2 (ENSLAFG00000003871) Xenarthra ANCESTRAL SPECIES ENSGT00950000182895.a.b #22 Armadillo MODERN SPECIES 1403 ENSDNOG00000034717 ENSDNOG00000035086 ENSDNOG00000047824 #22 ENSDNOG00000031851 ENSDNOG00000042242 ENSDNOG00000033116 ADGRL3 (ENSDNOG00000007471) TECRL (ENSDNOG00000008713) ENSDNOG00000046958 ENSDNOG00000042105 Marsupialia ANCESTRAL SPECIES 31 ENSGT00390000011570 #9 ENSGT00520000055666.b #10 ENSGT00390000005581.a #11 ENSGT00940000155682 #12 ENSGT00940000162889 #13 ENSGT00940000162185 #14 ENSGT00940000163601 ENSGT00940000162768.B ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00390000007989 #17 ENSGT00940000155992 #18 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00940000163258 #24 ENSGT00940000163441 ENSGT00960000188864 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000163494.a.b.h ENSGT00940000159292 Opossum MODERN SPECIES 1 ENSMODG00000047193 ENSMODG00000040170 ENSMODG00000020813 ENSMODG00000041496 ENSMODG00000038569 ENSMODG00000051394 ENSMODG00000037649 ENSMODG00000003482 ENSMODG00000008473 ENSMODG00000039017 ENSMODG00000044599 ENSMODG00000050747 DGKD (ENSMODG00000003088) ITGB2 (ENSMODG00000003456) #20 ENSMODG00000003425 #21 ENSMODG00000037820 #22 UBE2G2 (ENSMODG00000003406) #23 ENSMODG00000041526 ENSMODG00000049970 ENSMODG00000036597 ENSMODG00000041835 ENSMODG00000045266 ENSMODG00000037809 ENSMODG00000023091 ENSMODG00000039663 ENSMODG00000003218 ENSMODG00000023099 ENSMODG00000040790 ENSMODG00000046303 ENSMODG00000003134 ENSMODG00000003082 Marsupialia_b ANCESTRAL SPECIES 16 ENSGT01100000263555.b ENSGT00390000007870.a ENSGT00940000157800 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b #22 ENSGT00950000182895.a.a.a.a.a.a.a ##22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000164193 ENSGT00940000159666 ENSGT00940000162951 ENSGT00940000158336 ENSGT00390000003582.w ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00950000182990.b Diprotodontia ANCESTRAL SPECIES 9 ENSGT01100000263555.b ENSGT00390000007870.a ENSGT00940000157800 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b #22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000164193 ENSGT00940000159666 ENSGT00940000162951 ENSGT00940000158336 ENSGT00390000003582.w ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00950000182990.b ENSGT00390000013574 Diprotodontia_a ANCESTRAL SPECIES 11 ENSGT01100000263555.b ENSGT00390000007870.a ENSGT00940000157800 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b #22 ENSGT00940000162422.b ENSGT00390000011596.b ENSGT00940000164193 ENSGT00940000159666 ENSGT00940000162951 ENSGT00940000158336 ENSGT00390000003582.w ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00950000182990.b ENSGT00390000013574 Common wonbat MODERN SPECIES 1017 EIF4EBP1 (ENSVURG00010010388) ASH2L (ENSVURG00010010263) STAR (ENSVURG00010010240) LSM1 (ENSVURG00010010225) BAG4 (ENSVURG00010010211) DDHD2 (ENSVURG00010010168) PLPP5 (ENSVURG00010010146) NSD3 (ENSVURG00010010113) ENSVURG00010010093 FGFR1 (ENSVURG00010010009) TACC1 (ENSVURG00010009968) ENSVURG00010009947 ENSVURG00010009936 TM2D2 (ENSVURG00010009921) ADAM9 (ENSVURG00010009903) ENSVURG00010009875 #22 IDO1 (ENSVURG00010009857) ENSVURG00010009852 IDO2 (ENSVURG00010009838) TCIM (ENSVURG00010009828) ZMAT4 (ENSVURG00010009820) SFRP1 (ENSVURG00010009807) ENSVURG00010009804 GOLGA7 (ENSVURG00010009798) GINS4 (ENSVURG00010009794) ENSVURG00010009790 GPAT4 (ENSVURG00010009782) NKX6-3 (ENSVURG00010009774) ANK1 (ENSVURG00010009661) KAT6A (ENSVURG00010009624) AP3M2 (ENSVURG00010009602) koala DUPLICATION koala MODERN SPECIES 97 GALK1 (ENSPCIG00000020372) ITGB4 (ENSPCIG00000020375) ENSPCIG00000020395 RECQL5 (ENSPCIG00000020398) SMIM5 (ENSPCIG00000020404) ENSPCIG00000020414 LLGL2 (ENSPCIG00000023942) CASKIN2 (ENSPCIG00000020459) TMEM94 (ENSPCIG00000020473) GRB2 (ENSPCIG00000020065) SLC25A19 (ENSPCIG00000004843) MIF4GD (ENSPCIG00000004836) MRPS7 (ENSPCIG00000004824) GGA3 (ENSPCIG00000004778) NUP85 (ENSPCIG00000004754) ENSPCIG00000033629 #22 ENSPCIG00000004735 NT5C (ENSPCIG00000004729) ENSPCIG00000004716 SLC16A5 (ENSPCIG00000004707) ENSPCIG00000004696 ENSPCIG00000031337 ATP5PD (ENSPCIG00000004673) MRPL58 (ENSPCIG00000004667) CDR2L (ENSPCIG00000004662) HID1 (ENSPCIG00000004650) OTOP3 (ENSPCIG00000004641) OTOP2 (ENSPCIG00000004636) USH1G (ENSPCIG00000004624) FADS6 (ENSPCIG00000004616) FDXR (ENSPCIG00000004605) koala MODERN SPECIES 20 BCL11A (ENSPCIG00000028097) PAPOLG (ENSPCIG00000028094) REL (ENSPCIG00000028091) PUS10 (ENSPCIG00000028089) PEX13 (ENSPCIG00000028088) SANBR (ENSPCIG00000028080) ENSPCIG00000028078 ENSPCIG00000028076 USP34 (ENSPCIG00000027791) XPO1 (ENSPCIG00000027737) ENSPCIG00000024939 ENSPCIG00000024933 ENSPCIG00000024931 COMMD1 (ENSPCIG00000024929) ENSPCIG00000018941 #22 B3GNT2 (ENSPCIG00000024925) TMEM17 (ENSPCIG00000024919) EHBP1 (ENSPCIG00000005257) OTX1 (ENSPCIG00000024582) ENSPCIG00000037374 WDPCP (ENSPCIG00000024581) MDH1 (ENSPCIG00000024579) UGP2 (ENSPCIG00000022314) VPS54 (ENSPCIG00000022325) PELI1 (ENSPCIG00000022340) LGALSL (ENSPCIG00000020092) ENSPCIG00000025803 AFTPH (ENSPCIG00000025802) SERTAD2 (ENSPCIG00000025805) SLC1A4 (ENSPCIG00000023205) Platypus MODERN SPECIES 18 MCM3AP (ENSOANG00000013563) #8 LSS (ENSOANG00000013565) #9 ENSOANG00000000806 #10 FTCD (ENSOANG00000013566) #11 ENSOANG00000046435 #12 COL6A2 (ENSOANG00000013567) #12 ENSOANG00000006264 ENSOANG00000006265 ENSOANG00000000668 #15 ENSOANG00000043147 #16 POFUT2 (ENSOANG00000012784) #17 ADARB1 (ENSOANG00000012491) #18 ENSOANG00000046464 #19 ITGB2 (ENSOANG00000000415) #20 PTTG1IP (ENSOANG00000050465) #21 SUMO3 (ENSOANG00000046747) #22 UBE2G2 (ENSOANG00000050814) #23 ENSOANG00000042127 ENSOANG00000021786 ENSOANG00000048603 ENSOANG00000039296 ENSOANG00000044087 TSPEAR (ENSOANG00000015571) LRRC3 (ENSOANG00000015573) TRPM2 (ENSOANG00000015574) CFAP410 (ENSOANG00000015576) ENSOANG00000045904 ENSOANG00000015577 ENSOANG00000036914 ENSOANG00000051084 ENSOANG00000015583 Sauria ANCESTRAL SPECIES 9 ENSGT00940000162486 ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000158216 ENSGT00940000162528 ENSGT00940000156285 ENSGT00940000154951 ENSGT00940000154913 ENSGT00950000183009 ENSGT00940000163340 ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00390000001159 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00940000160749.b ENSGT00940000158655 ENSGT00940000160898 ENSGT00510000047981.d ENSGT00940000155297 Archelosauria ANCESTRAL SPECIES 11 ENSGT00510000047481 ENSGT00390000003033 ENSGT00940000162486 ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000158216 ENSGT00940000162528 ENSGT00940000156285 ENSGT00940000154951 ENSGT00940000154913 ENSGT00950000183009 ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00390000001159 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00940000160749.b ENSGT00940000158655 ENSGT00940000160898 ENSGT00510000047981.d ENSGT00940000155297 Archosauria ANCESTRAL SPECIES 60 ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00390000001159 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00940000160749.b ENSGT00940000158655 ENSGT00940000160898 ENSGT00510000047981.d ENSGT00940000155297 Australian saltwater crocodile MODERN SPECIES 30 ETV5 (ENSCPRG00005005052) DGKG (ENSCPRG00005005031) ENSCPRG00005005020 #21 SUMO3 (ENSCPRG00005005013) #22 UBE2G2 (ENSCPRG00005005006) #23 TSPEAR (ENSCPRG00005004982) LRRC3 (ENSCPRG00005004974) ENSCPRG00005004955 ENSCPRG00005004881 ENSCPRG00005004842 CFAP410 (ENSCPRG00005004834) PFKL (ENSCPRG00005004812) ENSCPRG00005004806 DNAJB11 (ENSCPRG00005004800) TBCCD1 (ENSCPRG00005004793) CAB39 (ENSCPRG00005004789) PER2 (ENSCPRG00005004773) ENSCPRG00005004754 PIK3CB (ENSCPRG00005004745) Aves ANCESTRAL SPECIES 49 ENSGT00940000153241.B ENSGT01050000244976.b.b.b.a.a.b ENSGT00940000160730 ENSGT00460000041648 ENSGT00940000159035 ENSGT00940000162473 ENSGT00940000158551.k.a ENSGT00900000141059 ENSGT00940000155098 ENSGT00940000158642 ENSGT00940000153476.a ENSGT01090000260100.B ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00940000158447 ENSGT00990000204467 ENSGT00530000063000.a.b.b ENSGT00940000154030.a.a ENSGT00940000158159 ENSGT00550000075086 ENSGT00950000182923.B.a ENSGT00950000182944.B.a ENSGT01030000234590.A.a.a ENSGT00390000018687 ENSGT00940000153680.a African ostrich DUPLICATION African ostrich MODERN SPECIES 313 RECQL5 (ENSSCUG00000002065) ENSSCUG00000002055 ENSSCUG00000002042 LLGL2 (ENSSCUG00000002031) ENSSCUG00000002025 ENSSCUG00000002022 ENSSCUG00000002020 ENSSCUG00000002019 TMEM94 (ENSSCUG00000002007) GRB2 (ENSSCUG00000002002) SLC25A19 (ENSSCUG00000001999) MIF4GD (ENSSCUG00000001995) MRPS7 (ENSSCUG00000001990) GGA3 (ENSSCUG00000001983) NUP85 (ENSSCUG00000001961) ENSSCUG00000001956 #22 JPT1 (ENSSCUG00000001952) NT5C (ENSSCUG00000001950) African ostrich MODERN SPECIES 280 AGXT (ENSSCUG00000006147) MAB21L4 (ENSSCUG00000006165) SNED1 (ENSSCUG00000006176) PASK (ENSSCUG00000006194) ENSSCUG00000006201 ANO7 (ENSSCUG00000006210) HDLBP (ENSSCUG00000006230) SEPTIN2 (ENSSCUG00000006244) ENSSCUG00000006249 ENSSCUG00000006251 STK25 (ENSSCUG00000006258) BOK (ENSSCUG00000006267) ENSSCUG00000006269 DGKG (ENSSCUG00000006276) ENSSCUG00000006288 #21 ENSSCUG00000006292 #22 UBE2G2 (ENSSCUG00000006297) #23 TSPEAR (ENSSCUG00000006301) LRRC3 (ENSSCUG00000006303) TRPM2 (ENSSCUG00000006306) Neognathae ANCESTRAL SPECIES 9 ENSGT00940000153241.B ENSGT01050000244976.b.b.b.a.a.b ENSGT00940000160730 ENSGT00460000041648 ENSGT00940000159035 ENSGT00940000162473 ENSGT00940000158551.k.a ENSGT00900000141059 ENSGT00940000155098 ENSGT00940000158642 ENSGT00940000153476.a ENSGT01090000260100.B ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00940000158447 ENSGT00990000204467 ENSGT00530000063000.a.b.b ENSGT00940000154030.a.a ENSGT00940000158159 ENSGT00550000075086 ENSGT00950000182923.B.a ENSGT00950000182944.B.a ENSGT01030000234590.A.a.a ENSGT00390000018687 ENSGT00940000153680.a Neognathae_b ANCESTRAL SPECIES 11 ENSGT00940000156474 ENSGT00940000153241.B ENSGT01050000244976.b.b.b.a.a.b ENSGT00940000160730 ENSGT00460000041648 ENSGT00940000159035 ENSGT00940000162473 ENSGT00900000141059 ENSGT00940000155098 ENSGT00940000158642 ENSGT00940000153476.a ENSGT01090000260100.B ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00940000158447 ENSGT00990000204467 ENSGT00530000063000.a.b.b ENSGT00940000154030.a.a ENSGT00940000158159 ENSGT00550000075086 ENSGT00950000182923.B.a ENSGT00950000182944.B.a ENSGT01030000234590.A.a.a ENSGT00390000018687 ENSGT00940000153680.a Passeriformes ANCESTRAL SPECIES 17 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000154272.B ENSGT00940000158025.b ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.a.a.b ##22 ENSGT00950000182895.a.a.b ##22 ENSGT00950000182895.a.b #22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000164193 ENSGT00940000159666 ENSGT00940000158336 ENSGT00390000003582 ENSGT00940000163471 ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00950000182990.b ENSGT00390000013574 Passeriformes_d ANCESTRAL SPECIES 17 ENSGT00940000170136 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000154272.B ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.a.a.b ##22 ENSGT00950000182895.a.a.b ##22 ENSGT00950000182895.a.b #22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000164193 ENSGT00940000159666 ENSGT00940000158336 ENSGT00390000003582 ENSGT00940000163471 ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00950000182990.b ENSGT00390000013574 Flycatcher MODERN SPECIES 8 SAP30BP (ENSFALG00000027577) RECQL5 (ENSFALG00000001087) ENSFALG00000001093 ENSFALG00000024516 LLGL2 (ENSFALG00000001115) TSEN54 (ENSFALG00000001119) ENSFALG00000015106 CASKIN2 (ENSFALG00000001125) TMEM94 (ENSFALG00000001137) GRB2 (ENSFALG00000023197) SLC25A19 (ENSFALG00000023937) MIF4GD (ENSFALG00000025719) MRPS7 (ENSFALG00000001162) GGA3 (ENSFALG00000001172) NUP85 (ENSFALG00000001202) ENSFALG00000028956 #22 JPT1 (ENSFALG00000001225) NT5C (ENSFALG00000026242) ENSFALG00000022944 SLC16A5 (ENSFALG00000001231) KCTD2 (ENSFALG00000001233) ATP5PD (ENSFALG00000001236) ENSFALG00000001240 ENSFALG00000001244 CDR2L (ENSFALG00000001251) HID1 (ENSFALG00000001252) OTOP3 (ENSFALG00000001254) OTOP2 (ENSFALG00000001257) USH1G (ENSFALG00000001261) FADS6 (ENSFALG00000001263) ENSFALG00000001271 Great tit MODERN SPECIES 8 SMIM5 (ENSPMJG00000001247) RECQL5 (ENSPMJG00000001223) ENSPMJG00000001212 ENSPMJG00000000845 LLGL2 (ENSPMJG00000000795) TSEN54 (ENSPMJG00000000766) MCHR1 (ENSPMJG00000000758) ENSPMJG00000000725 TMEM94 (ENSPMJG00000000598) GRB2 (ENSPMJG00000000573) SLC25A19 (ENSPMJG00000000566) MIF4GD (ENSPMJG00000000560) MRPS7 (ENSPMJG00000000556) GGA3 (ENSPMJG00000000519) NUP85 (ENSPMJG00000000448) ENSPMJG00000000437 #22 JPT1 (ENSPMJG00000000431) NT5C (ENSPMJG00000000423) SLC16A5 (ENSPMJG00000000412) KCTD2 (ENSPMJG00000000404) ATP5PD (ENSPMJG00000000391) MRPL58 (ENSPMJG00000000387) CDR2L (ENSPMJG00000000365) HID1 (ENSPMJG00000000337) OTOP3 (ENSPMJG00000000258) OTOP2 (ENSPMJG00000000235) USH1G (ENSPMJG00000000224) FDXR (ENSPMJG00000000162) GRIN2C (ENSPMJG00000000130) TMEM104 (ENSPMJG00000000123) NAT9 (ENSPMJG00000000107) Neognathae_c ANCESTRAL SPECIES 13 ENSGT00940000156474 ENSGT00940000153241.B ENSGT01050000244976.b.b.b.a.a.b ENSGT00940000160730 ENSGT00460000041648 ENSGT00940000159035 ENSGT00940000162473 ENSGT00900000141059 ENSGT00940000155098 ENSGT00940000158642 ENSGT00940000153476.a ENSGT01090000260100.B ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00940000158447 ENSGT00530000063000.a.b.b ENSGT00940000154030.a.a ENSGT00940000158159 ENSGT00550000075086 ENSGT00950000182923.B.a ENSGT00950000182944.B.a ENSGT01030000234590.A.a.a ENSGT00390000018687 ENSGT00940000153680.a ENSGT00390000011073 Kakapo MODERN SPECIES 25 ILKAP (ENSSHBG00005018391) KIF1A (ENSSHBG00005018396) AGXT (ENSSHBG00005018413) SNED1 (ENSSHBG00005018420) MTERF4 (ENSSHBG00005018434) PASK (ENSSHBG00005018439) ENSSHBG00005018445 HDLBP (ENSSHBG00005018451) SEPTIN2 (ENSSHBG00005018455) FARP2 (ENSSHBG00005018492) STK25 (ENSSHBG00005019215) BOK (ENSSHBG00005019219) ETV5 (ENSSHBG00005019229) DGKG (ENSSHBG00005019268) ENSSHBG00005019709 #21 SUMO3 (ENSSHBG00005019710) #22 UBE2G2 (ENSSHBG00005019713) #23 TSPEAR (ENSSHBG00005019721) LRRC3 (ENSSHBG00005019730) ENSSHBG00005019732 TRPM2 (ENSSHBG00005019743) THAP4 (ENSSHBG00005019750) ATG4B (ENSSHBG00005019753) DTYMK (ENSSHBG00005019758) ING5 (ENSSHBG00005019761) D2HGDH (ENSSHBG00005019764) GAL3ST2 (ENSSHBG00005019768) NEU4 (ENSSHBG00005019771) TM4SF19 (ENSSHBG00005019776) UBXN7 (ENSSHBG00005000533) RNF168 (ENSSHBG00005000535) Golden eagle MODERN SPECIES 1 KIF1A (ENSACCG00020006922) AGXT (ENSACCG00020006731) MAB21L4 (ENSACCG00020006709) SNED1 (ENSACCG00020006638) MTERF4 (ENSACCG00020006578) PASK (ENSACCG00020006533) ENSACCG00020006487 HDLBP (ENSACCG00020006434) SEPTIN2 (ENSACCG00020006400) FARP2 (ENSACCG00020006362) STK25 (ENSACCG00020006340) BOK (ENSACCG00020006323) ETV5 (ENSACCG00020006267) DGKG (ENSACCG00020006205) ENSACCG00020006180 #21 SUMO3 (ENSACCG00020006165) #22 UBE2G2 (ENSACCG00020006144) #23 TSPEAR (ENSACCG00020006103) LRRC3 (ENSACCG00020006078) TRPM2 (ENSACCG00020006040) THAP4 (ENSACCG00020006021) ATG4B (ENSACCG00020005995) DTYMK (ENSACCG00020005969) ING5 (ENSACCG00020005952) D2HGDH (ENSACCG00020005925) GAL3ST2 (ENSACCG00020005907) NEU4 (ENSACCG00020005884) TM4SF19 (ENSACCG00020005863) UBXN7 (ENSACCG00020005823) RNF168 (ENSACCG00020005790) WDR53 (ENSACCG00020005777) Galloanserae ANCESTRAL SPECIES 33 ENSGT00940000153241.B ENSGT01050000244976.b.b.b.a.a.b ENSGT00940000160730 ENSGT00460000041648 ENSGT00940000159035 ENSGT00940000162473 ENSGT00940000158551.k.a ENSGT00900000141059 ENSGT00940000155098 ENSGT00940000158642 ENSGT00940000153476.a ENSGT01090000260100.B ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000156404 Anatidae ANCESTRAL SPECIES 29 ENSGT00940000153241.B ENSGT01050000244976.b.b.b.a.a.b ENSGT00940000160730 ENSGT00460000041648 ENSGT00940000159035 ENSGT00940000162473 ENSGT00940000158551.k.a ENSGT00900000141059 ENSGT00940000155098 ENSGT00940000158642 ENSGT00940000153476.a ENSGT01090000260100.B ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000156404 ENSGT00390000013989.a ENSGT00390000005140.b.b ENSGT00940000160622 ENSGT00530000063529.C ENSGT01030000235073 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000157650.z.b ENSGT00940000157650.z.a Pink-footed goose MODERN SPECIES 71 AGXT (ENSABRG00000019657) MAB21L4 (ENSABRG00000019646) SNED1 (ENSABRG00000019626) MTERF4 (ENSABRG00000019613) PASK (ENSABRG00000019573) ENSABRG00000019504 ANO7 (ENSABRG00000019474) HDLBP (ENSABRG00000018659) SEPTIN2 (ENSABRG00000018574) FARP2 (ENSABRG00000017878) STK25 (ENSABRG00000017819) BOK (ENSABRG00000017818) ETV5 (ENSABRG00000017815) DGKG (ENSABRG00000017599) ENSABRG00000017558 #21 SUMO3 (ENSABRG00000017547) #22 UBE2G2 (ENSABRG00000017543) #23 TSPEAR (ENSABRG00000017518) TRPM2 (ENSABRG00000017270) PLEKHB2 (ENSABRG00000017241) FAM168B (ENSABRG00000017240) ENSABRG00000017217 AMER3 (ENSABRG00000017208) ENSABRG00000017205 KLHL6 (ENSABRG00000017201) KLHL24 (ENSABRG00000017197) YEATS2 (ENSABRG00000017179) MAP6D1 (ENSABRG00000017173) PARL (ENSABRG00000017161) ENSABRG00000017158 DUSP28 (ENSABRG00000017152) Phasianidae ANCESTRAL SPECIES 9 ENSGT00940000156474 ENSGT00940000153241.B ENSGT01050000244976.b.b.b.a.a.b ENSGT00940000160730 ENSGT00460000041648 ENSGT00940000159035 ENSGT00940000162473 ENSGT00900000141059 ENSGT00940000155098 ENSGT00940000158642 ENSGT00940000153476.a ENSGT01090000260100.B ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000156404 ENSGT00950000185905 ENSGT00390000011600 ENSGT00390000000076 ENSGT00940000159828 ENSGT00940000157053.m ENSGT01040000240444.A.b.a.b.fb.b ENSGT01040000240444.A.b.a.b.fb.a ENSGT01040000240444.A.b.a.a ENSGT01040000240444.A.b.b ENSGT00950000183115.a ENSGT00390000004360.a.b.b ENSGT00940000164578 Japanese quail MODERN SPECIES 27 ENSCJPG00005001707 KIF1A (ENSCJPG00005001732) AGXT (ENSCJPG00005002074) MAB21L4 (ENSCJPG00005002089) SNED1 (ENSCJPG00005002116) PASK (ENSCJPG00005002204) ENSCJPG00005002206 HDLBP (ENSCJPG00005002244) SEPTIN2 (ENSCJPG00005004473) FARP2 (ENSCJPG00005004476) STK25 (ENSCJPG00005005276) BOK (ENSCJPG00005005445) ETV5 (ENSCJPG00005005451) DGKG (ENSCJPG00005005455) ENSCJPG00005005475 #21 SUMO3 (ENSCJPG00005005478) #22 UBE2G2 (ENSCJPG00005005480) #23 TSPEAR (ENSCJPG00005005484) TRPM2 (ENSCJPG00005005486) ENSCJPG00005005506 OTOS (ENSCJPG00005005513) COPS9 (ENSCJPG00005005516) ADIPOQ (ENSCJPG00005005522) ST6GAL1 (ENSCJPG00005005531) ENSCJPG00005005538 ENSCJPG00005005540 GPR55 (ENSCJPG00005005542) ENSCJPG00005005545 ITM2C (ENSCJPG00005005549) CAB39 (ENSCJPG00005005578) ENSCJPG00005005581 Phasianidae_b ANCESTRAL SPECIES 12 ENSGT00940000156474 ENSGT00940000153241.B ENSGT01050000244976.b.b.b.a.a.b ENSGT00940000160730 ENSGT00460000041648 ENSGT00940000159035 ENSGT00940000158551.k.b ENSGT00900000141059 ENSGT00940000155098 ENSGT00940000158642 ENSGT00940000153476.a ENSGT01090000260100.B ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000156404 ENSGT00950000185905 ENSGT00390000011600 ENSGT00390000000076 ENSGT00940000159828 ENSGT00940000157053.m ENSGT01040000240444.A.b.a.b.fb.b ENSGT01040000240444.A.b.a.b.fb.a ENSGT01040000240444.A.b.a.a ENSGT01040000240444.A.b.b ENSGT00950000183115.a ENSGT00390000004360.a.b.b ENSGT00940000164578 Chicken DUPLICATION Chicken MODERN SPECIES 9 LLGL2 (ENSGALG00010030108) TSEN54 (ENSGALG00010029725) MCHR1 (ENSGALG00010029714) CASKIN2 (ENSGALG00010029711) TMEM94 (ENSGALG00010029708) GRB2 (ENSGALG00010029705) SLC25A19 (ENSGALG00010029704) MIF4GD (ENSGALG00010029703) MRPS7 (ENSGALG00010029701) GGA3 (ENSGALG00010029700) NUP85 (ENSGALG00010029698) SUMO2 (ENSGALG00010029696) #22 ARMC7 (ENSGALG00010029694) HN1 (ENSGALG00010029693) SLC16A5 (ENSGALG00010029687) KCTD2 (ENSGALG00010029686) ATP5H (ENSGALG00010029685) ENSGALG00010029684 MRPL58 (ENSGALG00010029683) CDR2L (ENSGALG00010029682) OTOP3 (ENSGALG00010029680) OTOP2 (ENSGALG00010029679) USH1G (ENSGALG00010029678) FADS6 (ENSGALG00010029676) FDXR (ENSGALG00010029674) GRIN2C (ENSGALG00010029671) HID1 (ENSGALG00010029669) Chicken MODERN SPECIES 38 KIF1A (ENSGALG00010024946) AGXT (ENSGALG00010024959) MAB21L4 (ENSGALG00010024962) SNED1 (ENSGALG00010025389) MTERF4 (ENSGALG00010025403) PASK (ENSGALG00010023299) PPP1R7 (ENSGALG00010023332) HDLBP (ENSGALG00010023338) SEPTIN2 (ENSGALG00010023354) FARP2 (ENSGALG00010023388) STK25 (ENSGALG00010023442) BOK (ENSGALG00010023473) ETV5 (ENSGALG00010023489) DGKG (ENSGALG00010023519) ENSGALG00010025508 #21 SUMO3 (ENSGALG00010025522) #22 UBE2G2 (ENSGALG00010025553) #23 TSPEAR (ENSGALG00010025563) TRPM2 (ENSGALG00010025575) ENSGALG00010025581 OTOS (ENSGALG00010025591) COPS9 (ENSGALG00010025599) ADIPOQ (ENSGALG00010025618) ST6GAL1 (ENSGALG00010025629) ENSGALG00010025657 ENSGALG00010025648 GPR55 (ENSGALG00010025664) ENSGALG00010025692 ITM2C (ENSGALG00010024964) CAB39 (ENSGALG00010024970) HES6 (ENSGALG00010024997) Cryptodira ANCESTRAL SPECIES 37 ENSGT00510000047481 ENSGT00390000003033 ENSGT00940000162486 ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000158216 ENSGT00940000162528 ENSGT00940000156285 ENSGT00940000154951 ENSGT00940000154913 ENSGT00950000183009 ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00390000001159 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00940000160749.b ENSGT00940000158655 ENSGT00940000160898 ENSGT00510000047981.d ENSGT00940000155297 Chinese turtle MODERN SPECIES 1233 DGKG (ENSPSIG00000015834) ENSPSIG00000015931 #21 SUMO3 (ENSPSIG00000016097) #22 UBE2G2 (ENSPSIG00000016313) #23 TSPEAR (ENSPSIG00000016342) LRRC3 (ENSPSIG00000006502) Testudinoidea ANCESTRAL SPECIES 9 ENSGT00510000047481 ENSGT00390000003033 ENSGT00940000162486 ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000158216 ENSGT00940000162528 ENSGT00940000156285 ENSGT00940000154951 ENSGT00940000154913 ENSGT00950000183009 ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00390000001159 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00940000160749.b ENSGT00940000158655 ENSGT00940000160898 ENSGT00510000047981.d.d ENSGT00510000047981.d.c Emydidae ANCESTRAL SPECIES 3 ENSGT00510000047481 ENSGT00390000003033 ENSGT00940000162486 ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000158216 ENSGT00940000162528 ENSGT00940000156285 ENSGT00940000154951 ENSGT00940000154913 ENSGT00950000183009 ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00390000001159 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00940000160749.b ENSGT00940000158655 ENSGT00940000160898 ENSGT00510000047981.d.c ENSGT00940000155297.a painted turtle MODERN SPECIES 776 SUMO3 (ENSCPBG00000000990) #22 UBE2G2 (ENSCPBG00000000961) #23 TSPEAR (ENSCPBG00000000821) LRRC3 (ENSCPBG00000000788) TRPM2 (ENSCPBG00000000683) CFAP410 (ENSCPBG00000000638) PFKL (ENSCPBG00000000606) ENSCPBG00000000582 DNAJB11 (ENSCPBG00000000567) TBCCD1 (ENSCPBG00000000555) ENSCPBG00000000543 CRYGS (ENSCPBG00000000526) RNF7 (ENSCPBG00000000507) SOX14 (ENSCPBG00000000488) CLDN18 (ENSCPBG00000000452) DZIP1L (ENSCPBG00000000430) Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 384 ENSTMTG00000004920 ETV5 (ENSTMTG00000004932) DGKG (ENSTMTG00000005057) ENSTMTG00000005986 #21 ENSTMTG00000006007 #22 UBE2G2 (ENSTMTG00000006035) #23 TSPEAR (ENSTMTG00000006080) LRRC3 (ENSTMTG00000006208) TRPM2 (ENSTMTG00000006442) CFAP410 (ENSTMTG00000009210) PFKL (ENSTMTG00000009232) PROCR (ENSTMTG00000009275) DNAJB11 (ENSTMTG00000009281) TBCCD1 (ENSTMTG00000009321) CRYGS (ENSTMTG00000009357) SOX14 (ENSTMTG00000009366) CLDN18 (ENSTMTG00000009380) ENSTMTG00000009397 ENSTMTG00000009413 ENSTMTG00000009424 Three-toed box turtle MODERN SPECIES 90 SMIM5 (ENSTMTG00000015772) RECQL5 (ENSTMTG00000015741) ENSTMTG00000015710 ENSTMTG00000015653 LLGL2 (ENSTMTG00000015592) TSEN54 (ENSTMTG00000015553) ENSTMTG00000015541 ENSTMTG00000015533 TMEM94 (ENSTMTG00000015482) GRB2 (ENSTMTG00000015461) SLC25A19 (ENSTMTG00000015450) MIF4GD (ENSTMTG00000015427) MRPS7 (ENSTMTG00000015414) GGA3 (ENSTMTG00000015393) NUP85 (ENSTMTG00000015363) ENSTMTG00000015348 #22 JPT1 (ENSTMTG00000015295) NT5C (ENSTMTG00000015284) ENSTMTG00000015278 SLC16A5 (ENSTMTG00000015267) ENSTMTG00000015211 KCTD2 (ENSTMTG00000015200) ATP5PD (ENSTMTG00000015190) MRPL58 (ENSTMTG00000015181) CDR2L (ENSTMTG00000015174) HID1 (ENSTMTG00000015149) OTOP3 (ENSTMTG00000015110) OTOP2 (ENSTMTG00000015096) USH1G (ENSTMTG00000015083) FADS6 (ENSTMTG00000015037) ENSTMTG00000015000 Testudinidae ANCESTRAL SPECIES 7 ENSGT00510000047481 ENSGT00390000003033 ENSGT00940000162486 ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000158216 ENSGT00940000162528 ENSGT00940000156285 ENSGT00940000154951 ENSGT00940000154913 ENSGT00950000183009 ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00390000001159 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00940000160749.b ENSGT00940000158655 ENSGT00940000160898 ENSGT00510000047981.d.d ENSGT00510000047981.d.c Abingdon island giant tortoise MODERN SPECIES 247 TRA2B (ENSCABG00000021776) ETV5 (ENSCABG00000021753) DGKG (ENSCABG00000021705) ENSCABG00000021701 #21 SUMO3 (ENSCABG00000021700) #22 UBE2G2 (ENSCABG00000021699) #23 TSPEAR (ENSCABG00000021695) LRRC3 (ENSCABG00000021692) ENSCABG00000021687 ENSCABG00000021624 ENSCABG00000021610 CFAP410 (ENSCABG00000021604) PFKL (ENSCABG00000020197) ENSCABG00000020025 DNAJB11 (ENSCABG00000019987) TBCCD1 (ENSCABG00000019974) CRYGS (ENSCABG00000019935) ENSCABG00000019930 SOX14 (ENSCABG00000019927) CLDN18 (ENSCABG00000019924) Goode s thornscrub tortoise MODERN SPECIES 23 ENSGEVG00005017215 DBR1 (ENSGEVG00005017237) ARMC8 (ENSGEVG00005017273) VPS8 (ENSGEVG00005017396) C3orf70 (ENSGEVG00005017547) EHHADH (ENSGEVG00005017560) MAP3K13 (ENSGEVG00005017580) TMEM41A (ENSGEVG00005017612) LIPH (ENSGEVG00005017629) SENP2 (ENSGEVG00005017716) IGF2BP2 (ENSGEVG00005017746) TRA2B (ENSGEVG00005017784) ETV5 (ENSGEVG00005017806) DGKG (ENSGEVG00005018029) ENSGEVG00005019001 #21 SUMO3 (ENSGEVG00005019014) #22 UBE2G2 (ENSGEVG00005019022) #23 TSPEAR (ENSGEVG00005019038) LRRC3 (ENSGEVG00005019061) TRPM2 (ENSGEVG00005019195) CFAP410 (ENSGEVG00005019553) PFKL (ENSGEVG00005019748) PROCR (ENSGEVG00005020012) DNAJB11 (ENSGEVG00005020016) TBCCD1 (ENSGEVG00005020024) CRYGS (ENSGEVG00005020032) SOX14 (ENSGEVG00005020036) CLDN18 (ENSGEVG00005020040) ENSGEVG00005020044 ENSGEVG00005020053 ENSGEVG00005020057 Lepidosauria ANCESTRAL SPECIES 48 ENSGT00940000162486 ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000158216 ENSGT00940000163412 ENSGT00940000162528 ENSGT00940000156285 ENSGT00940000154951 ENSGT00940000154913 ENSGT00950000183009 ENSGT00940000163340 ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00390000001159 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00940000160749.b ENSGT00940000158655 ENSGT00940000160898 ENSGT00510000047981.d ENSGT00940000155297 tuatara DUPLICATION tuatara MODERN SPECIES 1429 RECQL5 (ENSSPUG00000008872) ENSSPUG00000008902 ENSSPUG00000008907 ENSSPUG00000008914 ENSSPUG00000008936 LLGL2 (ENSSPUG00000008946) TSEN54 (ENSSPUG00000008988) ENSSPUG00000009000 ENSSPUG00000009007 GRB2 (ENSSPUG00000009161) SLC25A19 (ENSSPUG00000009266) MIF4GD (ENSSPUG00000009304) MRPS7 (ENSSPUG00000009313) GGA3 (ENSSPUG00000009334) NUP85 (ENSSPUG00000009393) ENSSPUG00000009419 #22 ENSSPUG00000009437 NT5C (ENSSPUG00000009455) ENSSPUG00000009466 SLC16A5 (ENSSPUG00000009476) ENSSPUG00000009502 ENSSPUG00000009537 ATP5PD (ENSSPUG00000009550) MRPL58 (ENSSPUG00000009563) CDR2L (ENSSPUG00000009573) HID1 (ENSSPUG00000009600) USH1G (ENSSPUG00000009717) FADS6 (ENSSPUG00000009733) ENSSPUG00000009776 GRIN2C (ENSSPUG00000009945) TMEM104 (ENSSPUG00000009993) tuatara MODERN SPECIES 1136 ENSSPUG00000014259 ENSSPUG00000014247 #21 ENSSPUG00000014238 #22 UBE2G2 (ENSSPUG00000014223) #23 TSPEAR (ENSSPUG00000014192) LRRC3 (ENSSPUG00000014179) ENSSPUG00000014147 ENSSPUG00000014099 Episquamata ANCESTRAL SPECIES 2 ENSGT00950000182972.a.a.a.b ENSGT00940000157741 ENSGT00940000153249.b.d ENSGT00940000162486 ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000158216 ENSGT00940000163412 ENSGT00940000154951 ENSGT00940000154913 ENSGT00950000183009 ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00390000001159 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00940000160749.b ENSGT00940000158655 ENSGT00940000160898 ENSGT00510000047981.d ENSGT00940000155297 Toxicofera ANCESTRAL SPECIES 2 ENSGT00950000182972.a.a.a.b ENSGT00940000157741 ENSGT00940000153249.b.d ENSGT00940000162486 ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000158216 ENSGT00940000163412 ENSGT00940000154951 ENSGT00940000154913 ENSGT00950000183009 ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00390000001159 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00940000160749.b ENSGT00940000158655 ENSGT00940000160898 ENSGT00510000047981.d ENSGT00940000155297 Lizard DUPLICATION Lizard MODERN SPECIES 1 ENSACAG00000039759 ENSACAG00000036517 ENSACAG00000006818 LLGL2 (ENSACAG00000006728) TSEN54 (ENSACAG00000006714) ENSACAG00000036665 CASKIN2 (ENSACAG00000006671) TMEM94 (ENSACAG00000006582) ENSACAG00000041425 GRB2 (ENSACAG00000006524) SLC25A19 (ENSACAG00000006493) MIF4GD (ENSACAG00000006463) MRPS7 (ENSACAG00000006441) GGA3 (ENSACAG00000006288) NUP85 (ENSACAG00000006230) ENSACAG00000006212 #22 JPT1 (ENSACAG00000006208) NT5C (ENSACAG00000028622) ENSACAG00000006197 SLC16A5 (ENSACAG00000006160) ENSACAG00000006147 KCTD2 (ENSACAG00000006112) ATP5PD (ENSACAG00000006092) ENSACAG00000044373 ENSACAG00000039326 MRPL58 (ENSACAG00000006044) CDR2L (ENSACAG00000005998) HID1 (ENSACAG00000005900) OTOP3 (ENSACAG00000005877) ENSACAG00000038598 OTOP2 (ENSACAG00000005863) Lizard MODERN SPECIES 2 ENSACAG00000007593 ENSACAG00000007713 VPS8 (ENSACAG00000007715) C3orf70 (ENSACAG00000034562) ENSACAG00000043530 EHHADH (ENSACAG00000007778) MAP3K13 (ENSACAG00000007817) ENSACAG00000007904 SENP2 (ENSACAG00000007929) IGF2BP2 (ENSACAG00000007995) TRA2B (ENSACAG00000044734) ETV5 (ENSACAG00000008128) ENSACAG00000042474 DGKG (ENSACAG00000008171) ENSACAG00000008261 #21 SUMO3 (ENSACAG00000008281) #22 UBE2G2 (ENSACAG00000040929) #23 ENSACAG00000008283 #23 TSPEAR (ENSACAG00000008325) LRRC3 (ENSACAG00000008369) TRPM2 (ENSACAG00000008372) CFAP410 (ENSACAG00000008678) PFKL (ENSACAG00000008680) ENSACAG00000009038 dnajb11 (ENSACAG00000036360) ENSACAG00000009103 CRYGS (ENSACAG00000009129) SOX14 (ENSACAG00000009132) CLDN18 (ENSACAG00000009163) DZIP1L (ENSACAG00000009191) A4GNT (ENSACAG00000009237) Elapidae ANCESTRAL SPECIES 4 ENSGT00940000157741 ENSGT00940000153249.b.d ENSGT00940000162486 ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000158216 ENSGT00940000163412 ENSGT00940000154951 ENSGT00940000154913 ENSGT00950000183009 ENSGT00940000160680 ENSGT00940000156768.s.b ENSGT00940000156768.s.a ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00390000001159 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00940000160749.b ENSGT00940000158655 ENSGT00940000160898 ENSGT00510000047981.d ENSGT00940000155297 Elapidae_a ANCESTRAL SPECIES ENSGT00950000182972.a.a.a.b ENSGT00940000157741 ENSGT00940000153249.b.d ENSGT00940000162486 ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000158216 ENSGT00940000163412 ENSGT00940000154951 ENSGT00940000154913 ENSGT00950000183009 ENSGT00940000160680 ENSGT00940000156768.s.a ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718.a ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00390000001159 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00940000160749.b ENSGT00940000158655 ENSGT00940000160898 ENSGT00510000047981.d ENSGT00940000155297 Blue-lipped sea krait MODERN SPECIES 422 ENSLLTG00000001032 #21 SUMO3 (ENSLLTG00000001044) #22 ENSLLTG00000001054 ENSLLTG00000001061 Acanthophiinae ANCESTRAL SPECIES 1 ENSGT00950000182972.a.a.a.b ENSGT00940000157741 ENSGT00940000153249.b.d ENSGT00940000162486 ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000158216 ENSGT00940000163412 ENSGT00940000154951 ENSGT00940000154913 ENSGT00950000183009 ENSGT00940000160680 ENSGT00940000156768.s.a ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718.a ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00390000001159 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00940000160749.b ENSGT00940000158655 ENSGT00940000160898 ENSGT00510000047981.d ENSGT00940000155297 Mainland tiger snake MODERN SPECIES MSL2 (ENSNSUG00000013037) STAG1 (ENSNSUG00000013039) PCCB (ENSNSUG00000013110) SLC35G2 (ENSNSUG00000013156) VPS8 (ENSNSUG00000013157) C3orf70 (ENSNSUG00000013159) EHHADH (ENSNSUG00000013160) MAP3K13 (ENSNSUG00000013161) ENSNSUG00000013177 SENP2 (ENSNSUG00000013178) IGF2BP2 (ENSNSUG00000013179) TRA2B (ENSNSUG00000013180) ETV5 (ENSNSUG00000013185) DGKG (ENSNSUG00000013210) ENSNSUG00000013211 #21 SUMO3 (ENSNSUG00000013212) #22 UBE2G2 (ENSNSUG00000013213) #23 TSPEAR (ENSNSUG00000013214) LRRC3 (ENSNSUG00000013215) ENSNSUG00000013216 ENSNSUG00000013217 CFAP410 (ENSNSUG00000013218) PFKL (ENSNSUG00000013221) ENSNSUG00000013416 DNAJB11 (ENSNSUG00000013417) TBCCD1 (ENSNSUG00000013419) CRYGS (ENSNSUG00000013420) SOX14 (ENSNSUG00000013421) CLDN18 (ENSNSUG00000013423) ENSNSUG00000013425 A4GNT (ENSNSUG00000013427) Eastern brown snake MODERN SPECIES 16 STAG1 (ENSPTXG00000018621) PCCB (ENSPTXG00000018623) SLC35G2 (ENSPTXG00000018625) ENSPTXG00000018627 VPS8 (ENSPTXG00000018632) C3orf70 (ENSPTXG00000018811) EHHADH (ENSPTXG00000018812) MAP3K13 (ENSPTXG00000018813) ENSPTXG00000018814 SENP2 (ENSPTXG00000018815) IGF2BP2 (ENSPTXG00000018816) TRA2B (ENSPTXG00000018817) ETV5 (ENSPTXG00000018818) DGKG (ENSPTXG00000018819) ENSPTXG00000018820 #21 SUMO3 (ENSPTXG00000018821) #22 UBE2G2 (ENSPTXG00000018822) #23 TSPEAR (ENSPTXG00000018823) LRRC3 (ENSPTXG00000018824) TRPM2 (ENSPTXG00000018825) CFAP410 (ENSPTXG00000018826) PFKL (ENSPTXG00000018827) ENSPTXG00000018831 DNAJB11 (ENSPTXG00000018833) TBCCD1 (ENSPTXG00000018835) CRYGS (ENSPTXG00000018837) SOX14 (ENSPTXG00000018839) CLDN18 (ENSPTXG00000018840) ENSPTXG00000018842 A4GNT (ENSPTXG00000018844) EPHB1 (ENSPTXG00000018847) Laterata ANCESTRAL SPECIES ENSGT00940000157741 ENSGT00940000153249.b.d ENSGT00940000162486 ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000158216 ENSGT00940000162528 ENSGT00940000163412 ENSGT00940000154951 ENSGT00940000154913 ENSGT00950000183009 ENSGT00940000160680 ENSGT00940000156768 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000156404 ENSGT00390000018807 ENSGT00940000159292 ENSGT00390000001159 ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 ENSGT00940000160749.b ENSGT00940000158655 ENSGT00940000160898 ENSGT00510000047981.d ENSGT00940000155297 Common wall lizard MODERN SPECIES 10 ITGB4 (ENSPMRG00000003570) SAP30BP (ENSPMRG00000003194) RECQL5 (ENSPMRG00000003180) ENSPMRG00000003157 LLGL2 (ENSPMRG00000002877) TSEN54 (ENSPMRG00000002771) ENSPMRG00000002756 ENSPMRG00000002745 TMEM94 (ENSPMRG00000015187) GRB2 (ENSPMRG00000015175) SLC25A19 (ENSPMRG00000015170) MIF4GD (ENSPMRG00000015162) MRPS7 (ENSPMRG00000015158) GGA3 (ENSPMRG00000014536) NUP85 (ENSPMRG00000014342) ENSPMRG00000014280 #22 NT5C (ENSPMRG00000014259) ENSPMRG00000014252 SLC16A5 (ENSPMRG00000014242) ENSPMRG00000014219 ENSPMRG00000014213 ATP5PD (ENSPMRG00000014204) ENSPMRG00000014198 CDR2L (ENSPMRG00000014153) HID1 (ENSPMRG00000014039) OTOP3 (ENSPMRG00000013982) OTOP2 (ENSPMRG00000013965) USH1G (ENSPMRG00000013957) FADS6 (ENSPMRG00000013951) ENSPMRG00000013934 GRIN2C (ENSPMRG00000013920) Argentine black and white tegu MODERN SPECIES 19 STAG1 (ENSSMRG00000022083) PCCB (ENSSMRG00000022084) SLC35G2 (ENSSMRG00000022085) ENSSMRG00000022086 VPS8 (ENSSMRG00000022087) C3orf70 (ENSSMRG00000022089) EHHADH (ENSSMRG00000022090) MAP3K13 (ENSSMRG00000022091) TMEM41A (ENSSMRG00000022092) SENP2 (ENSSMRG00000022093) IGF2BP2 (ENSSMRG00000022094) TRA2B (ENSSMRG00000022095) ETV5 (ENSSMRG00000022097) DGKG (ENSSMRG00000022098) ENSSMRG00000022099 #21 SUMO3 (ENSSMRG00000022100) #22 UBE2G2 (ENSSMRG00000022101) #23 TSPEAR (ENSSMRG00000022102) LRRC3 (ENSSMRG00000022103) ENSSMRG00000022104 ENSSMRG00000022105 CFAP410 (ENSSMRG00000022119) PFKL (ENSSMRG00000022120) ENSSMRG00000022122 DNAJB11 (ENSSMRG00000022123) TBCCD1 (ENSSMRG00000022124) CRYGS (ENSSMRG00000022126) SOX14 (ENSSMRG00000022136) CLDN18 (ENSSMRG00000022137) DZIP1L (ENSSMRG00000022138) A4GNT (ENSSMRG00000022139) Anura ANCESTRAL SPECIES 337 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b #22 ENSGT00940000162422 Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 1129 LAMTOR3 (ENSLLEG00000024321) ENSLLEG00000024518 #22 ENSLLEG00000024571 ENSLLEG00000024639 ENSLLEG00000024729 TMEM94 (ENSLLEG00000024756) ENSLLEG00000024983 CASKIN2 (ENSLLEG00000025002) Leishan spiny toad MODERN SPECIES 10 EHHADH (ENSLLEG00000025485) C3orf70 (ENSLLEG00000025562) VPS8 (ENSLLEG00000025606) DBR1 (ENSLLEG00000025945) ENSLLEG00000026077 ENSLLEG00000026233 ARMC8 (ENSLLEG00000026719) ENSLLEG00000027635 ADPRH (ENSLLEG00000005739) ENSLLEG00000005810 LRRC3 (ENSLLEG00000005820) ENSLLEG00000005849 TSPEAR (ENSLLEG00000005865) ENSLLEG00000005940 ENSLLEG00000005951 #23 ENSLLEG00000005983 #22 ENSLLEG00000006021 ENSLLEG00000006035 ENSLLEG00000006052 ITGB2 (ENSLLEG00000006090) #20 SLX9 (ENSLLEG00000006278) #19 ENSLLEG00000006395 ENSLLEG00000006415 ADARB1 (ENSLLEG00000006438) #18 POFUT2 (ENSLLEG00000006574) #17 ENSLLEG00000006663 ENSLLEG00000006698 UNC80 (ENSLLEG00000006882) ENSLLEG00000007252 KANSL1L (ENSLLEG00000007272) ACADL (ENSLLEG00000007338) Frog MODERN SPECIES 1 otop2 (ENSXETG00000027433) hid1 (ENSXETG00000027066) ENSXETG00000006252 otop3 (ENSXETG00000027068) ENSXETG00000037847 cdr2l (ENSXETG00000045622) mrpl58 (ENSXETG00000012505) atp5pd (ENSXETG00000012507) KCTD2 (ENSXETG00000046994) slc16a5 (ENSXETG00000012500) armc7 (ENSXETG00000030134) mif4gd (ENSXETG00000027063) mrps7 (ENSXETG00000012510) gga3 (ENSXETG00000012511) nup85 (ENSXETG00000027060) sumo2 (ENSXETG00000012516) #22 jpt1 (ENSXETG00000043697) grb2 (ENSXETG00000012520) tmem94 (ENSXETG00000012524) ENSXETG00000045143 caskin2 (ENSXETG00000012526) tsen54 (ENSXETG00000012532) llgl2 (ENSXETG00000012529) myo15b (ENSXETG00000032978) recql5 (ENSXETG00000032721) ENSXETG00000044674 sap30bp (ENSXETG00000012553) itgb4 (ENSXETG00000012556) galk1 (ENSXETG00000012573) ENSXETG00000037090 ENSXETG00000047269 Coelacanth DUPLICATION Coelacanth MODERN SPECIES 661 GRB2 (ENSLACG00000000591) SLC25A19 (ENSLACG00000001936) MIF4GD (ENSLACG00000002565) MRPS7 (ENSLACG00000003039) GGA3 (ENSLACG00000003280) NUP85 (ENSLACG00000004308) ENSLACG00000004990 #22 NT5C (ENSLACG00000005934) armc7 (ENSLACG00000006029) ENSLACG00000006321 ATP5PD (ENSLACG00000007618) ENSLACG00000007007 KCTD2 (ENSLACG00000007317) MRPL58 (ENSLACG00000008356) CDR2L (ENSLACG00000008595) HID1 (ENSLACG00000009154) OTOP3 (ENSLACG00000009986) ENSLACG00000010122 ENSLACG00000010470 USH1G (ENSLACG00000010674) FADS6 (ENSLACG00000010946) FDXR (ENSLACG00000011238) Coelacanth MODERN SPECIES 627 VWC2L (ENSLACG00000015603) ENSLACG00000014837 ABCA12 (ENSLACG00000014253) ENSLACG00000012612 #22 FTCD (ENSLACG00000012351) #11 ENSLACG00000022203 #10 hnmt (ENSLACG00000012024) C21orf58 (ENSLACG00000011823) YBEY (ENSLACG00000011567) #7 MCM3AP (ENSLACG00000010838) #8 LSS (ENSLACG00000010380) #9 ENSLACG00000009797 ENSLACG00000008603 ENSLACG00000005882 Actinopterygii ANCESTRAL SPECIES 170 ENSGT00940000153239.A ENSGT00940000158179 ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000162528 ENSGT00940000154913 ENSGT00950000183009 ENSGT00940000155489.a ENSGT00390000011514 ENSGT00730000110871.a.a.a.b ENSGT00940000164909 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00940000154360.A.b ENSGT00940000162768.B ENSGT00950000183022.b #15 ENSGT00940000158212.B #16 ENSGT00940000167200 Reedfish MODERN SPECIES 2 rgs14a (ENSECRG00000015228) ENSECRG00000015199 ENSECRG00000015117 adra2da (ENSECRG00000015090) ENSECRG00000015065 ENSECRG00000014951 rbm22 (ENSECRG00000014868) ndst1a (ENSECRG00000014727) rps14 (ENSECRG00000014674) TLR2 (ENSECRG00000014613) SLC35A4 (ENSECRG00000014565) ENSECRG00000014538 APBB3 (ENSECRG00000014499) SRA1 (ENSECRG00000014471) HMGXB3 (ENSECRG00000014406) sumo3a (ENSECRG00000014340) #22 ENSECRG00000014313 csf1ra (ENSECRG00000014257) pdgfrb (ENSECRG00000014164) cdx1b (ENSECRG00000014111) camk2a (ENSECRG00000013873) ARSI (ENSECRG00000013768) tmco6 (ENSECRG00000013730) ndufa2 (ENSECRG00000013696) ik (ENSECRG00000013652) wdr55 (ENSECRG00000013620) ENSECRG00000013595 hars (ENSECRG00000011628) DND1 (ENSECRG00000011600) zmat2 (ENSECRG00000011584) ENSECRG00000011487 Neopterygii ANCESTRAL SPECIES 61 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000162528 ENSGT00940000154913 ENSGT00950000183009 ENSGT00940000155489.a ENSGT00390000011514 ENSGT00730000110871.a.a.a.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 ENSGT00950000183165.a ENSGT00950000183165.b.a.e.b ENSGT00940000160220 ENSGT00940000154095.b.b.a.b ENSGT00550000075037 ENSGT00940000160059.a.b ENSGT00430000031142 ENSGT00940000154095.b.b.b ENSGT00390000003164 ENSGT00940000155522 ENSGT00390000016940.c.b ENSGT00950000182905.a.a.a.a.a.b ENSGT00940000164964.b Spotted gar MODERN SPECIES 650 ehhadh (ENSLOCG00000009587) tmem41ab (ENSLOCG00000009578) igf2bp2b (ENSLOCG00000009564) ENSLOCG00000009558 ENSLOCG00000009546 zgc:112416 (ENSLOCG00000009535) pcnt (ENSLOCG00000009517) ENSLOCG00000009506 ENSLOCG00000009495 atg9a (ENSLOCG00000009485) ANKZF1 (ENSLOCG00000009473) glb1l (ENSLOCG00000009458) ENSLOCG00000009450 ENSLOCG00000009424 ENSLOCG00000009417 #21 sumo3a (ENSLOCG00000009407) #22 ube2g2 (ENSLOCG00000009402) #23 ENSLOCG00000009398 TSPEAR (ENSLOCG00000009387) lrrc3 (ENSLOCG00000017837) pcbp3 (ENSLOCG00000009369) SLC19A1 (ENSLOCG00000009360) #15 ENSLOCG00000009336 ENSLOCG00000009325 ENSLOCG00000009315 SPEGNB (ENSLOCG00000009304) spega (ENSLOCG00000009286) inha (ENSLOCG00000009276) gjc4b (ENSLOCG00000009261) stk11ip (ENSLOCG00000009252) slc4a3 (ENSLOCG00000009239) Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Salmoninae ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Salmo ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 17 ENSSSAG00000086144 ENSSSAG00000093415 ENSSSAG00000099444 ENSSSAG00000041238 ENSSSAG00000097596 ENSSSAG00000113095 ENSSSAG00000083408 ENSSSAG00000087915 bmpr2b (ENSSSAG00000122021) ENSSSAG00000103937 ENSSSAG00000094760 sumo3 (ENSSSAG00000041220) #22 ENSSSAG00000096864 ENSSSAG00000119572 ENSSSAG00000092405 ENSSSAG00000086430 ENSSSAG00000084688 ENSSSAG00000107570 ENSSSAG00000113315 ENSSSAG00000101504 ENSSSAG00000120995 ENSSSAG00000121545 abi2a (ENSSSAG00000117505) ENSSSAG00000041203 ENSSSAG00000099334 CTLA4 (ENSSSAG00000093109) ENSSSAG00000097375 Atlantic salmon MODERN SPECIES 14 nek4 (ENSSSAG00000078205) spcs1 (ENSSSAG00000087655) glt8d1 (ENSSSAG00000078213) gnl3 (ENSSSAG00000078239) ENSSSAG00000078259 ENSSSAG00000078273 ENSSSAG00000089968 phc2b (ENSSSAG00000078282) ENSSSAG00000078313 ENSSSAG00000078443 padi2 (ENSSSAG00000079199) ENSSSAG00000079312 ENSSSAG00000079325 ENSSSAG00000103215 ENSSSAG00000079335 ENSSSAG00000086662 #22 cd34 (ENSSSAG00000079346) ENSSSAG00000079487 ENSSSAG00000080689 ENSSSAG00000080735 yod1 (ENSSSAG00000111797) zgc:158258 (ENSSSAG00000094334) kif17 (ENSSSAG00000080862) hp1bp3 (ENSSSAG00000106347) EIF4G3 (ENSSSAG00000080942) ece1 (ENSSSAG00000081046) ppb (ENSSSAG00000081220) ENSSSAG00000081261 ENSSSAG00000085467 ENSSSAG00000121243 ephb2b (ENSSSAG00000073864) River trout MODERN SPECIES 16 spoplb (ENSSTUG00000010901) NXPH2 (ENSSTUG00000010889) ENSSTUG00000010879 ENSSTUG00000010874 hycc2 (ENSSTUG00000010632) xrcc5 (ENSSTUG00000010206) ENSSTUG00000010186 igf2bp2a (ENSSTUG00000010052) ENSSTUG00000010031 ENSSTUG00000006604 sumo3a (ENSSTUG00000006502) #22 ENSSTUG00000006477 bmpr2b (ENSSTUG00000006363) cbln6 (ENSSTUG00000006354) ENSSTUG00000006350 RAPH1 (ENSSTUG00000006337) ENSSTUG00000006325 ENSSTUG00000006300 ABCB6 (ENSSTUG00000005724) ENSSTUG00000005689 ENSSTUG00000005675 ENSSTUG00000005668 ENSSTUG00000005657 ENSSTUG00000005641 mnx2a (ENSSTUG00000005637) ENSSTUG00000005631 Acanthomorphata ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Ovalentaria ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Atherinomorphae ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Oryzias ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Oryzias_b ANCESTRAL SPECIES 12 ENSGT00950000183049.C.a.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.a #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.e.b ENSGT00940000155095.i.a.e.a ENSGT00940000155095.i.a.f ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 ENSGT00940000154800.k.a Indian medaka MODERN SPECIES acvr1l (ENSOMEG00000012435) otomp (ENSOMEG00000012488) ENSOMEG00000012518 hs6st1b (ENSOMEG00000001025) ENSOMEG00000012565 ENSOMEG00000012606 ENSOMEG00000012623 ENSOMEG00000012714 ola1 (ENSOMEG00000012796) ENSOMEG00000012826 ENSOMEG00000012852 pcnt (ENSOMEG00000013043) atg9a (ENSOMEG00000013216) ENSOMEG00000013326 ENSOMEG00000013356 #21 sumo3a (ENSOMEG00000013372) #22 TSPEAR (ENSOMEG00000000338) ENSOMEG00000013489 fabp7a (ENSOMEG00000013438) ENSOMEG00000013513 fyna (ENSOMEG00000013551) marcksb (ENSOMEG00000000346) col10a1a (ENSOMEG00000013605) fhl5 (ENSOMEG00000013623) FUT9 (ENSOMEG00000013634) FUT9 (ENSOMEG00000013640) ENSOMEG00000013646 fut9a (ENSOMEG00000013654) manea (ENSOMEG00000013663) ppp1cb (ENSOMEG00000000348) ENSOMEG00000013709 Ovalentaria_B ANCESTRAL SPECIES 12 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.a #22 ENSGT00950000182895.a.b.v.k #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241.r ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Pomacentridae ANCESTRAL SPECIES 17 ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913.q ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00950000182895.a.b.u.a #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241.q.b ENSGT00940000159241.q.a ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 Pomacentridae_A ANCESTRAL SPECIES 14 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913.q ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00950000182895.a.b.u.a #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241.q.b ENSGT00940000159241.q.a ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 Spiny chromis MODERN SPECIES 1563 ENSAPOG00000007314 #21 sumo3a (ENSAPOG00000007349) #22 FMNL2 (ENSAPOG00000007485) prpf40a (ENSAPOG00000007544) rprmb (ENSAPOG00000007585) GALNT13 (ENSAPOG00000007642) Amphiprion ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Orange clownfish MODERN SPECIES 9 ENSAPEG00000013891 d2hgdh (ENSAPEG00000013915) acvr1l (ENSAPEG00000013964) otomp (ENSAPEG00000013993) hs6st1b (ENSAPEG00000014035) uggt1 (ENSAPEG00000014074) ENSAPEG00000014249 ola1 (ENSAPEG00000014283) TRA2B (ENSAPEG00000014341) ENSAPEG00000014362 ENSAPEG00000014411 ENSAPEG00000014637 atg9a (ENSAPEG00000014643) ENSAPEG00000014709 ENSAPEG00000014846 #21 sumo3a (ENSAPEG00000014857) #22 TSPEAR (ENSAPEG00000014885) ENSAPEG00000014934 fabp7a (ENSAPEG00000014966) ENSAPEG00000014978 fyna (ENSAPEG00000015022) marcksb (ENSAPEG00000015095) col10a1a (ENSAPEG00000015130) ENSAPEG00000015150 fhl5 (ENSAPEG00000015239) fut9a (ENSAPEG00000015587) manea (ENSAPEG00000015589) ppp1cb (ENSAPEG00000015594) ENSAPEG00000015618 ypel5 (ENSAPEG00000015650) lclat1 (ENSAPEG00000015662) Cichlidae ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Haplochromini_B ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Zebra mbuna MODERN SPECIES 1098 MARCHF4 (ENSMZEG00005007652) SMARCAL1 (ENSMZEG00005007660) ENSMZEG00005007691 nme9 (ENSMZEG00005007697) zgc:162707 (ENSMZEG00005007724) ehhadh (ENSMZEG00005007744) tmem41aa (ENSMZEG00005007760) igf2bp2a (ENSMZEG00005007777) tra2b (ENSMZEG00005007817) ENSMZEG00005007848 ENSMZEG00005007865 ANKZF1 (ENSMZEG00005007906) glb1l (ENSMZEG00005007880) ENSMZEG00005007928 ENSMZEG00005007958 #21 sumo3a (ENSMZEG00005007970) #22 FMNL2 (ENSMZEG00005008001) prpf40a (ENSMZEG00005008113) rprmb (ENSMZEG00005008152) GALNT13 (ENSMZEG00005008166) KCNJ3 (ENSMZEG00005008210) nr4a2a (ENSMZEG00005008220) ENSMZEG00005008236 GALNT5 (ENSMZEG00005008302) CYTIP (ENSMZEG00005008668) ACVR1C (ENSMZEG00005008690) ENSMZEG00005008721 ENSMZEG00005008772 upp2 (ENSMZEG00005008793) ENSMZEG00005008806 PKP4 (ENSMZEG00005008828) Lyretail cichlid MODERN SPECIES 303 SMARCAL1 (ENSNBRG00000016273) ENSNBRG00000016254 nme9 (ENSNBRG00000016220) zgc:162707 (ENSNBRG00000016203) ehhadh (ENSNBRG00000016194) tmem41aa (ENSNBRG00000016175) igf2bp2a (ENSNBRG00000016140) tra2b (ENSNBRG00000016092) ENSNBRG00000016058 ENSNBRG00000016037 ENSNBRG00000016024 ENSNBRG00000016017 glb1l (ENSNBRG00000015985) ENSNBRG00000015910 ENSNBRG00000015895 sumo3a (ENSNBRG00000015884) #22 FMNL2 (ENSNBRG00000015789) prpf40a (ENSNBRG00000015715) rprmb (ENSNBRG00000015702) GALNT13 (ENSNBRG00000015668) KCNJ3 (ENSNBRG00000015655) nr4a2a (ENSNBRG00000015630) ENSNBRG00000015589 GALNT5 (ENSNBRG00000015521) CYTIP (ENSNBRG00000015483) ACVR1C (ENSNBRG00000015465) ENSNBRG00000015421 ENSNBRG00000015405 upp2 (ENSNBRG00000015385) CCDC148 (ENSNBRG00000015355) ENSNBRG00000015341 Midas cichlid MODERN SPECIES 1312 MARCHF4 (ENSACIG00000001550) SMARCAL1 (ENSACIG00000001500) ENSACIG00000001490 nme9 (ENSACIG00000001452) zgc:162707 (ENSACIG00000001437) ehhadh (ENSACIG00000001368) tmem41aa (ENSACIG00000001348) igf2bp2a (ENSACIG00000001308) tra2b (ENSACIG00000001289) ENSACIG00000001261 ENSACIG00000001218 ANKZF1 (ENSACIG00000001142) glb1l (ENSACIG00000001086) ENSACIG00000000965 ENSACIG00000000950 sumo3a (ENSACIG00000000937) #22 FMNL2 (ENSACIG00000000871) prpf40a (ENSACIG00000000698) rprmb (ENSACIG00000000687) GALNT13 (ENSACIG00000000648) KCNJ3 (ENSACIG00000000634) nr4a2a (ENSACIG00000000618) ENSACIG00000000585 GALNT5 (ENSACIG00000000459) CYTIP (ENSACIG00000000423) ACVR1C (ENSACIG00000000392) ACVR1 (ENSACIG00000000364) ENSACIG00000000343 upp2 (ENSACIG00000000315) CCDC148 (ENSACIG00000000292) PKP4 (ENSACIG00000000218) Percomorphaceae_C ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Carangaria ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Carangaria_A ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Barramundi perch MODERN SPECIES 99 ENSLCAG00010015830 ENSLCAG00010015834 d2hgdh (ENSLCAG00010015841) acvr1l (ENSLCAG00010015849) otomp (ENSLCAG00010015857) hs6st1b (ENSLCAG00010015864) uggt1 (ENSLCAG00010015970) ENSLCAG00010016383 ola1 (ENSLCAG00010016395) TRA2B (ENSLCAG00010016418) ENSLCAG00010016424 zgc:112416 (ENSLCAG00010016440) atg9a (ENSLCAG00010016447) ENSLCAG00010016502 ENSLCAG00010016689 #21 sumo3a (ENSLCAG00010016693) #22 TSPEAR (ENSLCAG00010016705) ENSLCAG00010016720 fabp7a (ENSLCAG00010016736) ENSLCAG00010016752 ENSLCAG00010016768 fyna (ENSLCAG00010016802) marcksb (ENSLCAG00010016960) col10a1a (ENSLCAG00010016962) ENSLCAG00010016964 fhl5 (ENSLCAG00010016967) fut9a (ENSLCAG00010016968) manea (ENSLCAG00010016970) ppp1cb (ENSLCAG00010016977) ypel5 (ENSLCAG00010017005) lclat1 (ENSLCAG00010017009) Anabantaria ANCESTRAL SPECIES 10 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.a #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Anabantoidei ANCESTRAL SPECIES 9 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.a #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Climbing perch MODERN SPECIES 13 ENSATEG00000009018 ENSATEG00000009066 d2hgdh (ENSATEG00000028489) acvr1l (ENSATEG00000009120) otomp (ENSATEG00000009157) ENSATEG00000009178 uggt1 (ENSATEG00000009227) ENSATEG00000009325 ENSATEG00000009394 ENSATEG00000009454 ENSATEG00000009470 ENSATEG00000009914 atg9a (ENSATEG00000009971) ENSATEG00000010059 ENSATEG00000010197 #21 sumo3a (ENSATEG00000019871) #22 ENSATEG00000010230 ENSATEG00000010263 fabp7a (ENSATEG00000010300) ENSATEG00000010309 ENSATEG00000026366 fyna (ENSATEG00000010348) marcksb (ENSATEG00000010367) col10a1a (ENSATEG00000010374) ENSATEG00000010384 fhl5 (ENSATEG00000010395) fut9a (ENSATEG00000010415) manea (ENSATEG00000010469) ENSATEG00000010490 ENSATEG00000025350 ENSATEG00000010527 Zig-zag eel DUPLICATION Zig-zag eel MODERN SPECIES 14 ENSMAMG00000025616 ENSMAMG00000003424 d2hgdh (ENSMAMG00000003448) acvr1l (ENSMAMG00000003474) otomp (ENSMAMG00000003486) ENSMAMG00000003527 uggt1 (ENSMAMG00000003544) ENSMAMG00000003672 ENSMAMG00000003717 ENSMAMG00000003753 ENSMAMG00000003776 ENSMAMG00000004115 atg9a (ENSMAMG00000004137) ENSMAMG00000004167 ENSMAMG00000004297 #21 sumo3a (ENSMAMG00000004310) #22 ENSMAMG00000004336 ENSMAMG00000004446 fabp7a (ENSMAMG00000004479) ENSMAMG00000026988 ENSMAMG00000005383 fyna (ENSMAMG00000005399) marcksb (ENSMAMG00000005439) col10a1a (ENSMAMG00000005445) ENSMAMG00000005451 fhl5 (ENSMAMG00000005467) fut9a (ENSMAMG00000005489) ENSMAMG00000005494 ENSMAMG00000005536 ENSMAMG00000005546 ENSMAMG00000026496 Zig-zag eel MODERN SPECIES 13 ENSMAMG00000000772 ENSMAMG00000000791 ENSMAMG00000000828 nme9 (ENSMAMG00000000849) zgc:162707 (ENSMAMG00000025518) ehhadh (ENSMAMG00000000910) tmem41aa (ENSMAMG00000000927) igf2bp2a (ENSMAMG00000000969) tra2b (ENSMAMG00000001051) ENSMAMG00000001075 ENSMAMG00000001094 ENSMAMG00000001160 glb1l (ENSMAMG00000001126) ENSMAMG00000001186 ENSMAMG00000001376 #21 ENSMAMG00000001425 #22 FMNL2 (ENSMAMG00000001863) prpf40a (ENSMAMG00000002017) RPRM (ENSMAMG00000002055) GALNT13 (ENSMAMG00000002060) KCNJ3 (ENSMAMG00000002093) ENSMAMG00000002101 nr4a2a (ENSMAMG00000002132) ENSMAMG00000002159 GALNT5 (ENSMAMG00000002211) ENSMAMG00000025404 CYTIP (ENSMAMG00000002452) ACVR1C (ENSMAMG00000002492) ENSMAMG00000002523 ENSMAMG00000002537 ENSMAMG00000025700 Otomorpha ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Otophysi ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Characiphysae ANCESTRAL SPECIES 32 ENSGT00940000164964.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00940000181146 ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.a #22 ENSGT00510000047718.d ENSGT00950000183009.db.b ENSGT00940000154913 ENSGT00940000163412 ENSGT00940000157516 ENSGT00390000006618 ENSGT00390000010672 ENSGT00390000005923 ENSGT00940000158179.a ENSGT00940000156083 ENSGT00940000157563 ENSGT00730000111163 ENSGT00940000159160 ENSGT00550000075118 ENSGT00390000009001 Characiphysae_b ANCESTRAL SPECIES 205 ENSGT00940000164964.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00940000181146 ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.a #22 ENSGT00510000047718.d ENSGT00950000183009.db.b ENSGT00940000154913 ENSGT00940000163412 ENSGT00940000157516 ENSGT00390000005923 Electric eel MODERN SPECIES 91 cops8 (ENSEEEG00000021481) ENSEEEG00000021479 ENSEEEG00000021474 RANBP2 (ENSEEEG00000021379) SLC5A7 (ENSEEEG00000021356) CLDN14 (ENSEEEG00000021355) ENSEEEG00000021351 ENSEEEG00000021252 ENSEEEG00000021234 ENSEEEG00000021231 ENSEEEG00000021232 glb1l (ENSEEEG00000021094) ENSEEEG00000021084 ENSEEEG00000021081 ENSEEEG00000021079 #21 ENSEEEG00000021058 #22 TSPEAR (ENSEEEG00000021055) tra2b (ENSEEEG00000021051) ENSEEEG00000021049 igf2bp2a (ENSEEEG00000020633) tmem41aa (ENSEEEG00000020605) ehhadh (ENSEEEG00000020602) FAM171B (ENSEEEG00000020598) lrrc3 (ENSEEEG00000020597) pcbp3 (ENSEEEG00000020591) col18a1a (ENSEEEG00000020577) #16 ENSEEEG00000020558 CTDSP1 (ENSEEEG00000020551) SPEGNB (ENSEEEG00000020549) ENSEEEG00000020548 ENSEEEG00000020543 Cyprinoidei ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.a #22 Zebrafish MODERN SPECIES 21 marchf7 (ENSDARG00000057772) FAM171B (ENSDARG00000096271) ENSDARG00000096375 zswim2 (ENSDARG00000075700) ENSDARG00000096384 CALCRL (ENSDARG00000011571) GULP1 (ENSDARG00000057833) ENSDARG00000024847 ENSDARG00000079945 ENSDARG00000073837 zgc:112416 (ENSDARG00000044549) pcnt (ENSDARG00000033012) atg9a (ENSDARG00000044551) ENSDARG00000074723 pttg1ipa (ENSDARG00000090156) sumo3a (ENSDARG00000028119) #22 ENSDARG00000016750 coq7 (ENSDARG00000062594) notum2 (ENSDARG00000088411) ccr7 (ENSDARG00000044561) cycsb (ENSDARG00000044562) ENSDARG00000096239 nfe2l2b (ENSDARG00000089697) mtx2 (ENSDARG00000029415) lnpk (ENSDARG00000006639) atp5mc3b (ENSDARG00000009447) chrna1 (ENSDARG00000009021) ENSDARG00000071084 GPR155 (ENSDARG00000071086) ola1 (ENSDARG00000044565) SP3 (ENSDARG00000007812) Osteoglossiformes ANCESTRAL SPECIES 86 ENSGT00940000155353.a.a.a ENSGT01030000234646.B.a.a.b.f ENSGT00940000164127.b ENSGT00940000156075.a.a.k ENSGT00940000163262.a ENSGT00940000154076.B.b ENSGT00390000000673.a.a ENSGT00940000162304.b ENSGT00730000111135 ENSGT00910000144296.b ENSGT00940000156851 ENSGT01030000234635.a.b.a.b.b.b ENSGT00950000182942.a.b ENSGT00940000164909.d ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.a #22 ENSGT00510000047718.c.a ENSGT00980000199010 ENSGT00940000156449.d ENSGT00950000183046.a.a.gb ENSGT00390000005530.a.a.l ENSGT00390000013916 ENSGT00940000153534.A ENSGT00940000154319.c.b ENSGT00940000172395 ENSGT00940000158239.a.b.a ENSGT00940000159606 ENSGT00940000156444.e ENSGT00390000005159.l ENSGT00390000009001 ENSGT00940000156552.c.a.h P. kingsleyae MODERN SPECIES 8 PDK1 (ENSPKIG00000005371) ENSPKIG00000005245 RAPGEF4 (ENSPKIG00000005099) MAP3K20 (ENSPKIG00000004982) ENSPKIG00000004895 ENSPKIG00000004755 SP3 (ENSPKIG00000004665) OLA1 (ENSPKIG00000004546) sp9 (ENSPKIG00000004479) CIR1 (ENSPKIG00000004454) ENSPKIG00000004428 chrna1 (ENSPKIG00000004406) glb1l (ENSPKIG00000004321) ENSPKIG00000004202 ENSPKIG00000004144 #21 sumo3a (ENSPKIG00000004110) #22 ENSPKIG00000004085 TSPEAR (ENSPKIG00000004043) ENSPKIG00000004005 BMPR2 (ENSPKIG00000003884) ENSPKIG00000003801 ical1 (ENSPKIG00000003716) CARF (ENSPKIG00000003659) nop58 (ENSPKIG00000003585) sumo1 (ENSPKIG00000003552) ENSPKIG00000003510 fzd7a (ENSPKIG00000003493) cdk15 (ENSPKIG00000003440) MPP4 (ENSPKIG00000003356) TMEM237 (ENSPKIG00000003302) ABI2 (ENSPKIG00000003196) Osteoglossocephalai ANCESTRAL SPECIES 56 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000162528 ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909 ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v #22 ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000158193 #23 ENSGT00510000047718.d ENSGT00510000047718.c ENSGT00940000157267 Clupeocephala ANCESTRAL SPECIES 3 ENSGT00940000157608 ENSGT00940000164537 ENSGT00940000158179.a ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000158193 #23 ENSGT00510000047718.d ENSGT00980000199010 ENSGT00940000156449.b.b ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000164964.b ENSGT00940000156449.a ENSGT00950000183046.a.a.fb ENSGT00390000013916 ENSGT00940000158239.a.a ENSGT00940000155861.C.f ENSGT00940000156444.d ENSGT00390000005159.i ENSGT00940000156089.e.b Otomorpha ANCESTRAL SPECIES 516 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000158193 #23 ENSGT00510000047718.c ENSGT00940000157267 Clupeiformes ANCESTRAL SPECIES 518 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00940000168354.d ENSGT00950000182895.a.b.u.b #22 ENSGT00940000158193 #23 ENSGT00510000047718.c ENSGT00940000157267 Denticle herring MODERN SPECIES 6 ENSDCDG00000030685 ENSDCDG00000031874 ENSDCDG00000031931 ENSDCDG00000031933 aamp (ENSDCDG00000031946) rab21 (ENSDCDG00000032083) ENSDCDG00000032150 TRHDE (ENSDCDG00000032943) cpm (ENSDCDG00000032946) srgap1b (ENSDCDG00000032971) kics2 (ENSDCDG00000033648) ENSDCDG00000033651 TSPAN9 (ENSDCDG00000033702) dmtf1 (ENSDCDG00000033705) pttg1ipa (ENSDCDG00000033707) SUMO3 (ENSDCDG00000033709) #22 ube2g2 (ENSDCDG00000033712) #23 TSPEAR (ENSDCDG00000033717) ENSDCDG00000033738 nabp1b (ENSDCDG00000033740) cavin2b (ENSDCDG00000033742) TMEFF2 (ENSDCDG00000033744) vps16 (ENSDCDG00000033751) rgn (ENSDCDG00000033756) zgc:112023 (ENSDCDG00000033760) ENSDCDG00000033765 Otophysi ANCESTRAL SPECIES 44 ENSGT00530000063836.a ENSGT00950000183184.a.a.b ENSGT00390000006826 ENSGT00940000159898 ENSGT00940000165235.a.a ENSGT00940000156186.l.a ENSGT00940000155675.p.b ENSGT00940000168325 ENSGT00950000183140.a.a ENSGT00940000155489.a ENSGT00390000011514 ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000165591.a ENSGT00390000014520.n ENSGT00940000165776 ENSGT01030000234667.a.a.a.a.b ENSGT00940000157883.a.b.f ENSGT00950000182892.a.a.b.e ENSGT00950000182919.C ENSGT00390000001859.f ENSGT00940000157981.a.a.a ENSGT00940000156851.d.c ENSGT00910000144296.d ENSGT00390000004153.d ENSGT00390000000673.a.b ENSGT00940000155099.k.b ENSGT00940000154076.B.b Cyprinoidei ANCESTRAL SPECIES 73 ENSGT00390000014839.b.g ENSGT00940000164909.e.b ENSGT00940000168354.d ENSGT00950000182895.a.b.u.b #22 ENSGT00940000165591.a ENSGT00390000014520.n ENSGT00940000165776 ENSGT01030000234667.a.a.a.a.b ENSGT00940000157883.a.b.f ENSGT00950000182892.a.a.b.e ENSGT00950000182919.C ENSGT00390000001859.f.b ENSGT00940000157981.a.a.a ENSGT00940000156851.d.c ENSGT00910000144296.d ENSGT00390000004153.d ENSGT00390000000673.a.b ENSGT00940000155099.k.b ENSGT00940000154076.B.b.j Zebrafish MODERN SPECIES 24 tmem237a (ENSDARG00000041735) MPP4 (ENSDARG00000058222) ALS2 (ENSDARG00000075111) fzd7a (ENSDARG00000060004) ENSDARG00000019950 fam117bb (ENSDARG00000009839) bmpr2b (ENSDARG00000020057) ENSDARG00000020834 ENSDARG00000058409 ENSDARG00000070011 ENSDARG00000095504 glb1l (ENSDARG00000029955) ENSDARG00000041904 ENSDARG00000074143 pttg1ipb (ENSDARG00000040039) sumo3b (ENSDARG00000035993) #22 TSPEAR (ENSDARG00000089235) tra2b (ENSDARG00000002168) igf2bp2a (ENSDARG00000003421) tmem41aa (ENSDARG00000070028) ehhadh (ENSDARG00000070029) C9H3orf70 (ENSDARG00000061664) nup35 (ENSDARG00000012222) znf804a (ENSDARG00000027079) zc3h15 (ENSDARG00000015889) itgav (ENSDARG00000006314) si:dkey-69o16.5 (ENSDARG00000070057) umps (ENSDARG00000012215) cryba2b (ENSDARG00000041925) fev (ENSDARG00000009242) cdk5r2b (ENSDARG00000078671) Cyprininae ANCESTRAL SPECIES 23 ENSGT00940000155655.A.g ENSGT00940000157230.b.f ENSGT00940000155359.w.b.db ENSGT00530000063836.a.p ENSGT00950000183184.a.a.b.a ENSGT00940000165235.a.a ENSGT00940000156186.l.a.a.a ENSGT00940000168325.b ENSGT00950000183140.a.a.a ENSGT00940000155489.a.a ENSGT00390000011514 ENSGT00730000110871.a.a.a.b.f ENSGT00390000014839.b.h ENSGT00940000164909.e.b.b ENSGT00940000168354.d.a ENSGT00950000182895.a.b.u.b #22 ENSGT00940000165591.a.b ENSGT00390000014520.n.a ENSGT00940000165776.g ENSGT01030000234667.a.a.a.a.b.c ENSGT00940000157883.a.b.f.c.b ENSGT00950000182892.a.a.b.e.b ENSGT00950000182919.C.n ENSGT00390000001859.f.b.b.a ENSGT00940000157981.a.a.a.c.a ENSGT00940000156851.d.c.a ENSGT00940000155557.kc ENSGT00390000004153.d.j ENSGT00390000000673.a.b.e.a ENSGT00940000155099.k.b.c ENSGT00940000154076.B.b.j Cyprininae_a ANCESTRAL SPECIES 13 ENSGT00940000157230.b.e ENSGT00940000155359.w.b.eb ENSGT00530000063836.a.o ENSGT00950000183184.a.a.b.b ENSGT00390000006826.a ENSGT00940000159898.i ENSGT00940000156186.l.a.a.b ENSGT00940000168325.a ENSGT00950000183140.a.a.b ENSGT00940000155489.a.b ENSGT00940000174917 ENSGT00730000110871.a.a.a.b.e ENSGT00390000014839.b.g ENSGT00940000164909.e.b.a ENSGT00940000168354.d.b ENSGT00950000182895.a.b.u.b #22 ENSGT00940000165591.a.a ENSGT00390000014520.n.b ENSGT00940000165776.h ENSGT01030000234667.a.a.a.a.b.d ENSGT00940000157883.a.b.f.c.a ENSGT00950000182892.a.a.b.e.a ENSGT00950000182919.C.m ENSGT00390000001859.f.b.a ENSGT00940000157981.a.a.a.c.b ENSGT00940000156851.d.c.b ENSGT00910000144296.d ENSGT00390000004153.d.i ENSGT00390000000673.a.b.f ENSGT00390000000673.a.b.e.b ENSGT00940000155099.k.b.d Golden-line barbel DUPLICATION Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 33 ENSSGRG00000053994 ENSSGRG00000053991 pttg1ipa (ENSSGRG00000053990) ENSSGRG00000053965 #22 ENSSGRG00000053610 coq7 (ENSSGRG00000053577) notum2 (ENSSGRG00000053576) ccr7 (ENSSGRG00000053575) cycsb (ENSSGRG00000053567) mtx2 (ENSSGRG00000053529) lnpk (ENSSGRG00000053526) atp5mc3b (ENSSGRG00000053499) chrna1 (ENSSGRG00000053498) WIPF1 (ENSSGRG00000053497) GPR155 (ENSSGRG00000053435) ENSSGRG00000053433 SP3 (ENSSGRG00000053432) ENSSGRG00000053431 ENSSGRG00000053429 Golden-line barbel MODERN SPECIES 62 ENSSGRG00000025896 ENSSGRG00000025918 wdsub1 (ENSSGRG00000026505) ENSSGRG00000026512 MARCHF7 (ENSSGRG00000026608) FAM171B (ENSSGRG00000026611) zswim2 (ENSSGRG00000026614) CALCRL (ENSSGRG00000026622) ENSSGRG00000027498 ENSSGRG00000027499 ENSSGRG00000027502 pcnt (ENSSGRG00000027504) ATG9A (ENSSGRG00000027509) ENSSGRG00000027515 pttg1ipa (ENSSGRG00000027520) ENSSGRG00000027521 #22 ENSSGRG00000027600 coq7 (ENSSGRG00000028458) notum2 (ENSSGRG00000028459) ccr7 (ENSSGRG00000028460) cycsb (ENSSGRG00000028463) nfe2l2b (ENSSGRG00000028481) mtx2 (ENSSGRG00000028486) ENSSGRG00000028581 atp5mc3b (ENSSGRG00000028582) chrna1 (ENSSGRG00000028593) GPR155 (ENSSGRG00000028597) ENSSGRG00000028625 ENSSGRG00000028684 ENSSGRG00000028685 ENSSGRG00000028688 Golden-line barbel MODERN SPECIES 219 tmem237a (ENSSGRG00000054344) ENSSGRG00000054343 ALS2 (ENSSGRG00000054333) fzd7a (ENSSGRG00000054326) CARF (ENSSGRG00000054325) fam117bb (ENSSGRG00000054324) bmpr2b (ENSSGRG00000054319) ENSSGRG00000054316 ENSSGRG00000054302 ENSSGRG00000054279 ENSSGRG00000054273 ANKZF1 (ENSSGRG00000054272) glb1l (ENSSGRG00000054217) ENSSGRG00000054205 pttg1ipb (ENSSGRG00000054202) sumo3b (ENSSGRG00000054152) #22 ENSSGRG00000054150 ENSSGRG00000054149 igf2bp2a (ENSSGRG00000053943) tmem41aa (ENSSGRG00000053938) ehhadh (ENSSGRG00000053937) zgc:162707 (ENSSGRG00000053936) Characiphysae ANCESTRAL SPECIES 18 ENSGT00940000155359.w.b.bb ENSGT00530000063836.a ENSGT00950000183184.a.a.b ENSGT00390000006826 ENSGT00940000165235.a.a ENSGT00940000156186.l.a ENSGT00940000155675.p.b ENSGT00940000168325 ENSGT00950000183140.a.a ENSGT00940000155489.a ENSGT00390000011514 ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000165591.a ENSGT00390000014520.n ENSGT00940000165776 ENSGT01030000234667.a.a.a.a.b ENSGT00940000157883.a.b.f ENSGT00950000182892.a.a.b.e ENSGT00950000182919.C ENSGT00390000001859.f ENSGT00940000157981.a.a.a ENSGT00940000156851.d.c ENSGT00910000144296.d ENSGT00390000004153.d ENSGT00390000000673.a.b ENSGT00940000155099.k.b ENSGT00940000154076.B.b Channel catfish MODERN SPECIES 3 march7 (ENSIPUG00000018025) fam171b (ENSIPUG00000018056) zswim2 (ENSIPUG00000018064) calcrl (ENSIPUG00000018077) nmnat1 (ENSIPUG00000018100) gulp1b (ENSIPUG00000018114) ENSIPUG00000018185 ENSIPUG00000018196 ENSIPUG00000018199 ENSIPUG00000018211 zgc:112416 (ENSIPUG00000018260) pcnt (ENSIPUG00000018294) atg9a (ENSIPUG00000018387) ENSIPUG00000018445 pttg1ipa (ENSIPUG00000018580) SUMO3 (ENSIPUG00000018584) #22 ENSIPUG00000018615 COQ7 (ENSIPUG00000018837) notum2 (ENSIPUG00000018885) CCR7 (ENSIPUG00000018909) CYC (ENSIPUG00000018915) mtx2 (ENSIPUG00000018936) lnpk (ENSIPUG00000018992) AT5G3 (ENSIPUG00000019033) chrna1 (ENSIPUG00000019058) WIPF1 (ENSIPUG00000019090) GPR155 (ENSIPUG00000019106) ola1 (ENSIPUG00000019139) ENSIPUG00000019202 ENSIPUG00000019218 ENSIPUG00000019272 Characiphysae_b ANCESTRAL SPECIES 127 ENSGT00940000155359.w.b.bb ENSGT00530000063836.a ENSGT00950000183184.a.a.b ENSGT00390000006826 ENSGT00940000165235.a.a ENSGT00940000156186.l.a ENSGT00940000155675.p.b ENSGT00940000168325 ENSGT00950000183140.a.a ENSGT00940000155489.a ENSGT00390000011514 ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000165591.a ENSGT00390000014520.n ENSGT00940000165776 ENSGT01030000234667.a.a.a.a.b ENSGT00940000157883.a.b.f ENSGT00950000182892.a.a.b.e ENSGT00950000182919.C ENSGT00390000001859.f ENSGT00940000157981.a.a.a ENSGT00940000156851.d.c ENSGT00910000144296.d ENSGT00390000004153.d ENSGT00390000000673.a.b ENSGT00940000155099.k.b ENSGT00940000154076.B.b Characoidei ANCESTRAL SPECIES 124 ENSGT00940000155359.w.b.bb ENSGT00530000063836.a ENSGT00950000183184.a.a.b ENSGT00390000006826 ENSGT00940000165235.a.a ENSGT00940000156186.l.a ENSGT00940000155675.p.b ENSGT00940000168325 ENSGT00950000183140.a.a ENSGT00940000155489.a ENSGT00390000011514 ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000165591.a ENSGT00390000014520.n ENSGT00940000165776 ENSGT01030000234667.a.a.a.a.b ENSGT00940000157883.a.b.f ENSGT00950000182892.a.a.b.e ENSGT00950000182919.C ENSGT00390000001859.f ENSGT00940000157981.a.a.a ENSGT00940000156851.d.c ENSGT00940000155557.kc ENSGT00390000004153.d.g ENSGT00390000000673.a.b ENSGT00940000155099.k.b ENSGT00940000154076.B.b Red-bellied piranha MODERN SPECIES 93 ENSPNAG00000003032 RBM26 (ENSPNAG00000003024) NBEAL1 (ENSPNAG00000013975) ENSPNAG00000002928 TRAK2 (ENSPNAG00000013732) ENSPNAG00000013725 SEMA5B (ENSPNAG00000002901) unc50 (ENSPNAG00000002873) slc25a12 (ENSPNAG00000002858) ENSPNAG00000002847 zgc:112416 (ENSPNAG00000013594) pcnt (ENSPNAG00000002811) atg9a (ENSPNAG00000002672) ENSPNAG00000013229 ENSPNAG00000013064 #21 sumo3b (ENSPNAG00000013056) #22 ENSPNAG00000013036 coq7 (ENSPNAG00000002452) notum2 (ENSPNAG00000005408) ccr7 (ENSPNAG00000002437) cycsb (ENSPNAG00000012874) nfe2l2b (ENSPNAG00000002430) mtx2 (ENSPNAG00000012847) lnpk (ENSPNAG00000012789) atp5mc3b (ENSPNAG00000002387) chrna1 (ENSPNAG00000002374) ENSPNAG00000012709 GPR155 (ENSPNAG00000012683) ola1 (ENSPNAG00000012638) ENSPNAG00000002316 ENSPNAG00000012566 Electric eel MODERN SPECIES 314 ENSEEEG00000021996 ENSEEEG00000021995 ENSEEEG00000021994 zswim2 (ENSEEEG00000021992) ENSEEEG00000021991 GULP1 (ENSEEEG00000021990) ENSEEEG00000021989 ENSEEEG00000021988 ENSEEEG00000021987 atg9a (ENSEEEG00000021984) ENSEEEG00000021983 ENSEEEG00000021981 ENSEEEG00000021978 #21 SUMO3 (ENSEEEG00000021954) #22 ENSEEEG00000021936 coq7 (ENSEEEG00000021928) notum2 (ENSEEEG00000021925) ccr7 (ENSEEEG00000021923) cycsb (ENSEEEG00000021918) ENSEEEG00000021917 mtx2 (ENSEEEG00000021916) lnpk (ENSEEEG00000021914) atp5mc3b (ENSEEEG00000021912) chrna1 (ENSEEEG00000021911) WIPF1 (ENSEEEG00000021910) GPR155 (ENSEEEG00000021909) ola1 (ENSEEEG00000021904) ENSEEEG00000021898 ENSEEEG00000021897 Euteleosteomorpha ANCESTRAL SPECIES 6 ENSGT00940000157608 ENSGT00940000164537 ENSGT00940000158179.a ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000158193 #23 ENSGT00510000047718.d ENSGT00980000199010 ENSGT00940000156449.a ENSGT00950000183046.a.a.fb ENSGT00390000013916 ENSGT00940000154319 ENSGT00940000158239.a.b ENSGT00940000159606 ENSGT00940000155861.C.e ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089.e.a Protacanthopterygii ANCESTRAL SPECIES 99 ENSGT00940000157608 ENSGT00940000164537 ENSGT00940000158179.a ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412.b ENSGT00940000154913.p.a ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000158193 #23 ENSGT00510000047718.d ENSGT00980000199010 ENSGT00940000156449.a ENSGT00950000183046.a.a.fb ENSGT00390000013916 ENSGT00940000158239.a.b.f ENSGT00940000155861.C.f ENSGT00940000156444.d ENSGT00390000005159.i ENSGT00940000156089.f ENSGT00940000156552.c.a ENSGT00530000063873.B ENSGT00940000159069 ENSGT00940000156160.b.b Northern pike MODERN SPECIES 19 ENSELUG00000010440 nme9 (ENSELUG00000010559) ENSELUG00000010491 ENSELUG00000029425 zgc:162707 (ENSELUG00000025175) ehhadh (ENSELUG00000010632) tmem41aa (ENSELUG00000010646) igf2bp2a (ENSELUG00000010676) tra2b (ENSELUG00000010705) ENSELUG00000010731 ENSELUG00000010749 ANKZF1 (ENSELUG00000010785) glb1l (ENSELUG00000010822) ENSELUG00000010966 ENSELUG00000011005 #21 sumo3b (ENSELUG00000011027) #22 ube2g2 (ENSELUG00000011061) #23 TSPEAR (ENSELUG00000011087) ENSELUG00000034671 bmpr2b (ENSELUG00000000389) fam117bb (ENSELUG00000011120) ENSELUG00000011133 ENSELUG00000033217 ENSELUG00000029802 fzd7a (ENSELUG00000011210) ENSELUG00000011231 ENSELUG00000011283 ALS2 (ENSELUG00000011306) ENSELUG00000026273 ENSELUG00000027269 ENSELUG00000011387 Salmoninae ANCESTRAL SPECIES 304 ENSGT00390000015276 ENSGT00940000155682.g.a #12 ENSGT00940000158179.b ENSGT00940000157608.c ENSGT00940000164537 ENSGT00940000158179.a ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00950000182895.a.b.u.b #22 ENSGT00940000158193 #23 ENSGT00510000047718.d ENSGT00940000156449.a.c ENSGT00950000183046.a.a.fb ENSGT00390000013916 ENSGT00940000154319.f ENSGT00940000158239.a.b.f ENSGT00940000155861.C.f ENSGT00940000156444.d ENSGT00390000005159.i ENSGT00940000156552.c.a.f Salmoninae_a ANCESTRAL SPECIES ENSGT00390000015276 ENSGT00940000155682.g.a #12 ENSGT00940000158179.b ENSGT00940000157608.c ENSGT00940000164537 ENSGT00940000158179.a ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a.n ENSGT00950000182895.a.b.u.b #22 ENSGT00940000158193 #23 ENSGT00510000047718.d ENSGT00940000156449.a.c.b ENSGT00950000183046.a.a.fb ENSGT00390000013916 ENSGT00940000154319.f ENSGT00940000158239.a.b.f ENSGT00940000155861.C.f ENSGT00940000156444.d ENSGT00390000005159.i ENSGT00940000156552.c.a.f ENSGT00940000178309.b ENSGT00530000063873.B.h ENSGT00940000159069 ENSGT00950000183019.f.b.b.c Salmo ANCESTRAL SPECIES 10 ENSGT00940000158216 ENSGT00940000159292.l ENSGT00390000015276 ENSGT00940000155682.g.a #12 ENSGT00940000158179.b ENSGT00940000157608.c ENSGT00940000164537 ENSGT00390000006618.j ENSGT00940000157516 ENSGT00940000163412.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a.n ENSGT00950000182895.a.b.u.b #22 ENSGT00940000158193 #23 ENSGT00510000047718.d ENSGT00940000156449.a.c.b ENSGT00950000183046.a.a.fb ENSGT00390000013916 ENSGT00940000154319.f ENSGT00940000158239.a.b.f ENSGT00940000155861.C.f ENSGT00940000156444.d ENSGT00390000005159.i ENSGT00940000156552.c.a.f ENSGT00530000063873.B.h ENSGT00940000159069 ENSGT00950000183019.f.b.b.c ENSGT00940000155126.s.b Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 22 ENSSSAG00000046452 trpa1a (ENSSSAG00000044167) dnjb6 (ENSSSAG00000044091) shhb (ENSSSAG00000101828) ENSSSAG00000044065 cnpy1 (ENSSSAG00000044032) en2b (ENSSSAG00000100691) paxip1 (ENSSSAG00000043728) ENSSSAG00000108854 ptf1a (ENSSSAG00000043684) dlgap1a (ENSSSAG00000042875) cahz (ENSSSAG00000116739) CDH18 (ENSSSAG00000042660) ENSSSAG00000042586 cdh6 (ENSSSAG00000037381) ENSSSAG00000094179 #22 zgc:56556 (ENSSSAG00000035430) mc4r (ENSSSAG00000035179) ENSSSAG00000035069 ENSSSAG00000031405 xkr4 (ENSSSAG00000031199) tmem68 (ENSSSAG00000031121) ENSSSAG00000031025 lyn (ENSSSAG00000015493) dcup (ENSSSAG00000010135) zswim5 (ENSSSAG00000009882) selenop2 (ENSSSAG00000009868) si:ch73-382f3.1 (ENSSSAG00000106680) toe1 (ENSSSAG00000080626) tmem53 (ENSSSAG00000080607) tesk2 (ENSSSAG00000080617) Atlantic salmon MODERN SPECIES 13 nme9 (ENSSSAG00000055739) zgc:162707 (ENSSSAG00000093489) ehhadh (ENSSSAG00000055724) tmem41aa (ENSSSAG00000116676) ENSSSAG00000111091 ENSSSAG00000107082 ENSSSAG00000005556 ENSSSAG00000052812 glb1l (ENSSSAG00000051577) ENSSSAG00000098086 ENSSSAG00000021713 ENSSSAG00000050303 ENSSSAG00000064688 ENSSSAG00000002802 ENSSSAG00000120441 SUMO3 (ENSSSAG00000084800) #22 ube2g2 (ENSSSAG00000051507) #23 TSPEAR (ENSSSAG00000050067) ENSSSAG00000105259 ENSSSAG00000117001 ENSSSAG00000050202 ENSSSAG00000050171 ENSSSAG00000050144 ENSSSAG00000088870 ENSSSAG00000096274 ENSSSAG00000049766 ENSSSAG00000091966 ENSSSAG00000080914 ENSSSAG00000080894 ENSSSAG00000092198 ENSSSAG00000114673 Oncorhynchus ANCESTRAL SPECIES 170 ENSGT00940000164909.e.a.n ENSGT00950000182895.a.b.u.b #22 ENSGT00980000199010 ENSGT00940000156449.a.d ENSGT00970000197040 ENSGT00940000163520.A.a.a.b ENSGT00940000156089.f ENSGT00940000156552.c.a.e ENSGT00530000063873.B.g Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 21 ENSOMYG00000064435 ENSOMYG00000070267 ENSOMYG00000051139 ENSOMYG00000069255 ENSOMYG00000075218 xrcc5 (ENSOMYG00000001629) ENSOMYG00000070173 ENSOMYG00000059990 ENSOMYG00000077002 ENSOMYG00000069980 ENSOMYG00000062590 SUMO3 (ENSOMYG00000057887) #22 ENSOMYG00000001527 ENSOMYG00000063418 ENSOMYG00000076555 ENSOMYG00000015001 abi2a (ENSOMYG00000071875) ENSOMYG00000071606 ENSOMYG00000001378 ENSOMYG00000056154 ENSOMYG00000074984 ENSOMYG00000068449 ENSOMYG00000076231 ENSOMYG00000054031 ENSOMYG00000059150 ENSOMYG00000069527 ENSOMYG00000051460 Rainbow trout MODERN SPECIES 14 MARCHF4 (ENSOMYG00000037882) ENSOMYG00000037908 nme9 (ENSOMYG00000065544) zgc:162707 (ENSOMYG00000037937) ENSOMYG00000037959 tmem41aa (ENSOMYG00000037320) ENSOMYG00000076103 ENSOMYG00000037308 ENSOMYG00000056838 ENSOMYG00000054236 glb1l (ENSOMYG00000050634) ENSOMYG00000065556 ENSOMYG00000069159 ENSOMYG00000063985 ENSOMYG00000077747 SUMO3 (ENSOMYG00000037253) #22 ENSOMYG00000058894 #23 TSPEAR (ENSOMYG00000037235) ENSOMYG00000074538 bmpr2b (ENSOMYG00000049256) ENSOMYG00000063219 ENSOMYG00000073277 fam117bb (ENSOMYG00000056573) ENSOMYG00000049726 ENSOMYG00000076869 ENSOMYG00000056834 ENSOMYG00000056170 ENSOMYG00000058730 sumo-1 (ENSOMYG00000025363) fzd7a (ENSOMYG00000026160) ALS2 (ENSOMYG00000070422) Oncorhynchus_a ANCESTRAL SPECIES 121 ENSGT00940000157608.c ENSGT00940000157563 ENSGT00940000154200.A.b.b ENSGT00940000160645.o.z ENSGT00940000156083.j ENSGT00940000158179.a ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516.h ENSGT00940000163412.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a.n ENSGT00950000182895.a.b.u.b #22 ENSGT00980000199010 ENSGT00940000156449.a.d ENSGT00940000163520.A.a.a.b ENSGT00940000156089.f ENSGT00940000156552.c.a.e ENSGT00530000063873.B.g ENSGT00940000160059.a.b.b.a ENSGT00940000166348 Chinook salmon MODERN SPECIES 244 sumo3b (ENSOTSG00005043280) #22 ube2g2 (ENSOTSG00005043287) #23 PSTK (ENSOTSG00005043289) IKZF5 (ENSOTSG00005043291) HMX3 (ENSOTSG00005043293) HMX2 (ENSOTSG00005043295) elocb (ENSOTSG00005043298) ube2wa (ENSOTSG00005043300) runx2b (ENSOTSG00005043321) Coho salmon DUPLICATION Coho salmon MODERN SPECIES 18 TMEM169 (ENSOKIG00005045376) COL6A2 (ENSOKIG00005045365) #12 MARCHF4 (ENSOKIG00005045359) SMARCAL1 (ENSOKIG00005044589) nme9 (ENSOKIG00005044513) ENSOKIG00005044476 zgc:162707 (ENSOKIG00005044469) ehhadh (ENSOKIG00005044438) tmem41aa (ENSOKIG00005044428) ENSOKIG00005044419 ENSOKIG00005044414 ENSOKIG00005044402 glb1l (ENSOKIG00005042882) ENSOKIG00005042720 ENSOKIG00005041828 sumo3b (ENSOKIG00005041723) #22 ube2g2 (ENSOKIG00005041702) #23 TSPEAR (ENSOKIG00005041677) ENSOKIG00005041664 bmpr2b (ENSOKIG00005041479) ENSOKIG00005041440 ENSOKIG00005041403 SUMO1 (ENSOKIG00005041379) ENSOKIG00005041343 fzd7a (ENSOKIG00005041315) ALS2 (ENSOKIG00005040413) MPP4 (ENSOKIG00005040094) tmem237a (ENSOKIG00005040010) RAPH1 (ENSOKIG00005039928) ENSOKIG00005039897 FER1L6 (ENSOKIG00005039679) Coho salmon MODERN SPECIES 11 ENSOKIG00005001090 zc3h15 (ENSOKIG00005001097) itgav (ENSOKIG00005001157) si:dkey-69o16.5 (ENSOKIG00005001266) ihha (ENSOKIG00005001272) ENSOKIG00005001279 BIN1 (ENSOKIG00005001312) TMEM198 (ENSOKIG00005001339) desma (ENSOKIG00005001348) ENSOKIG00005001361 ptprna (ENSOKIG00005001369) ENSOKIG00005001384 tuba8l5 (ENSOKIG00005001396) ENSOKIG00005001417 ENSOKIG00005001444 ENSOKIG00005001503 #22 ENSOKIG00005001509 ENSOKIG00005001511 BMPR2 (ENSOKIG00005001539) ENSOKIG00005001665 ENSOKIG00005001666 ENSOKIG00005001669 RAPH1 (ENSOKIG00005001687) CTLA4 (ENSOKIG00005001718) ENSOKIG00005001725 ABCB6 (ENSOKIG00005001749) mnx2a (ENSOKIG00005001823) ENSOKIG00005001828 ENSOKIG00005001842 ENSOKIG00005001848 ENSOKIG00005001852 Acanthomorphata ANCESTRAL SPECIES 5 ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00970000197261 ENSGT00940000170370 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000160160 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A ENSGT00940000155773.b Euacanthomorphacea ANCESTRAL SPECIES 15 ENSGT00940000155682.g.a #12 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000160160 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 Percomorphaceae ANCESTRAL SPECIES 34 ENSGT00940000155682.g.a #12 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000160160 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 Percomorphaceae_B ANCESTRAL SPECIES 17 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Ovalentaria ANCESTRAL SPECIES 14 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241.r ENSGT00650000094711 ENSGT00940000159241.q.a ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 Ovalentaria_B ANCESTRAL SPECIES 18 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT00990000204856 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 ENSGT00940000154800.k.a Pomacentridae ANCESTRAL SPECIES 17 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913.q ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00950000182895.a.b.u.a #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241.q.b ENSGT00940000159241.q.a ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a Pomacentridae_A ANCESTRAL SPECIES 14 ENSGT01030000235116 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913.q ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00950000182895.a.b.u.a #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241.q.b ENSGT00940000159241.q.a ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a Spiny chromis MODERN SPECIES 434 ENSAPOG00000023649 ola1 (ENSAPOG00000023705) TRA2B (ENSAPOG00000023727) ENSAPOG00000023764 pcnt (ENSAPOG00000000769) zgc:112416 (ENSAPOG00000003258) atg9a (ENSAPOG00000003356) ENSAPOG00000003499 ENSAPOG00000003531 #21 sumo3b (ENSAPOG00000003545) #22 TSPEAR (ENSAPOG00000003556) ENSAPOG00000003564 fabp7a (ENSAPOG00000003576) ENSAPOG00000003598 ENSAPOG00000003620 fyna (ENSAPOG00000003674) marcksb (ENSAPOG00000003694) col10a1a (ENSAPOG00000003702) ENSAPOG00000003711 fhl5 (ENSAPOG00000003721) fut9a (ENSAPOG00000003732) manea (ENSAPOG00000003743) ppp1cb (ENSAPOG00000003782) ENSAPOG00000003815 ypel5 (ENSAPOG00000003833) Amphiprion ANCESTRAL SPECIES 8 ENSGT01030000235116 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913.q ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00940000159241.q.a ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A ENSGT00940000155773.b Clown anemonefish MODERN SPECIES 1354 gfod2 (ENSAOCG00000016861) thap11 (ENSAOCG00000016876) nrn1lb (ENSAOCG00000016907) SLC38A8 (ENSAOCG00000017020) cmtr2 (ENSAOCG00000017042) calb2b (ENSAOCG00000017310) ENSAOCG00000017362 ENSAOCG00000017371 #21 ENSAOCG00000017387 #22 FMNL2 (ENSAOCG00000017512) prpf40a (ENSAOCG00000017649) rprmb (ENSAOCG00000017681) GALNT13 (ENSAOCG00000017736) KCNJ3 (ENSAOCG00000017746) nr4a2a (ENSAOCG00000017758) ENSAOCG00000017767 GALNT5 (ENSAOCG00000017892) CYTIP (ENSAOCG00000017928) ACVR1C (ENSAOCG00000017979) Orange clownfish MODERN SPECIES 3 ENSAPEG00000015813 MARCHF4 (ENSAPEG00000015828) SMARCAL1 (ENSAPEG00000015861) nme9 (ENSAPEG00000015896) zgc:162707 (ENSAPEG00000015979) ehhadh (ENSAPEG00000015995) tmem41aa (ENSAPEG00000016010) igf2bp2a (ENSAPEG00000016037) tra2b (ENSAPEG00000016141) ENSAPEG00000016161 ENSAPEG00000016190 ENSAPEG00000016246 glb1l (ENSAPEG00000016270) ENSAPEG00000016354 ENSAPEG00000016514 #21 ENSAPEG00000016551 #22 FMNL2 (ENSAPEG00000016594) prpf40a (ENSAPEG00000016745) rprmb (ENSAPEG00000016840) GALNT13 (ENSAPEG00000016860) KCNJ3 (ENSAPEG00000016935) nr4a2a (ENSAPEG00000016964) ENSAPEG00000016984 ENSAPEG00000017009 CYTIP (ENSAPEG00000017018) ACVR1C (ENSAPEG00000017055) ENSAPEG00000017094 ENSAPEG00000017140 upp2 (ENSAPEG00000017167) ENSAPEG00000017203 PKP4 (ENSAPEG00000017310) Cichlidae ANCESTRAL SPECIES 22 ENSGT00390000012355.A.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT00990000204856 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.h ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Midas cichlid MODERN SPECIES 231 ENSACIG00000017202 ENSACIG00000017088 d2hgdh (ENSACIG00000017057) acvr1l (ENSACIG00000016967) otomp (ENSACIG00000016937) hs6st1b (ENSACIG00000016921) uggt1 (ENSACIG00000016835) ENSACIG00000016803 ola1 (ENSACIG00000016766) TRA2B (ENSACIG00000016739) ENSACIG00000016713 pcnt (ENSACIG00000016414) ENSACIG00000016378 atg9a (ENSACIG00000016340) ENSACIG00000016252 sumo3b (ENSACIG00000016237) #22 TSPEAR (ENSACIG00000016211) ENSACIG00000016148 fabp7a (ENSACIG00000015837) ENSACIG00000015805 fyna (ENSACIG00000015783) marcksb (ENSACIG00000015747) col10a1a (ENSACIG00000015731) ENSACIG00000015693 fhl5 (ENSACIG00000015671) fut9a (ENSACIG00000015654) manea (ENSACIG00000015639) ppp1cb (ENSACIG00000015612) ENSACIG00000015601 ypel5 (ENSACIG00000015593) lclat1 (ENSACIG00000015578) Pseudocrenilabrinae ANCESTRAL SPECIES 8 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT01100000264078.a.a ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT00990000204856 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.h ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 6 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT01100000264078.a.a ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT00990000204856 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.h ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Lyretail cichlid MODERN SPECIES 346 ENSNBRG00000022579 ENSNBRG00000022594 acvr1l (ENSNBRG00000022614) otomp (ENSNBRG00000022622) ENSNBRG00000022635 hs6st1b (ENSNBRG00000022646) uggt1 (ENSNBRG00000022667) ENSNBRG00000022721 ola1 (ENSNBRG00000022738) TRA2B (ENSNBRG00000022760) ENSNBRG00000022774 pcnt (ENSNBRG00000022805) atg9a (ENSNBRG00000022936) ENSNBRG00000022997 ENSNBRG00000023039 #21 sumo3b (ENSNBRG00000023058) #22 TSPEAR (ENSNBRG00000023075) ENSNBRG00000023113 fabp7a (ENSNBRG00000023141) ENSNBRG00000023148 ENSNBRG00000023158 ENSNBRG00000023163 fyna (ENSNBRG00000023178) marcksb (ENSNBRG00000023189) col10a1a (ENSNBRG00000023211) ENSNBRG00000023221 fhl5 (ENSNBRG00000023237) fut9a (ENSNBRG00000023295) fut9a (ENSNBRG00000023391) manea (ENSNBRG00000023401) ppp1cb (ENSNBRG00000023411) Haplochromini ANCESTRAL SPECIES 7 ENSGT00390000012355.A.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT00990000204856 ENSGT00940000158431.a.a.a.a.a.b.b.c.b ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.h ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a Burton s mouthbrooder DUPLICATION Burton s mouthbrooder MODERN SPECIES 438 SSBP4 (ENSHBUG00000005735) ENSHBUG00000005755 ENSHBUG00000005799 acvr1l (ENSHBUG00000005813) otomp (ENSHBUG00000005856) hs6st1b (ENSHBUG00000005898) uggt1 (ENSHBUG00000005999) SP3 (ENSHBUG00000006036) ola1 (ENSHBUG00000006078) TRA2B (ENSHBUG00000006118) ENSHBUG00000006139 pcnt (ENSHBUG00000006340) atg9a (ENSHBUG00000006428) ENSHBUG00000006551 ENSHBUG00000006581 #21 ENSHBUG00000006596 #22 TSPEAR (ENSHBUG00000006725) ENSHBUG00000006829 fabp7a (ENSHBUG00000006848) ENSHBUG00000006853 ENSHBUG00000006865 fyna (ENSHBUG00000006907) marcksb (ENSHBUG00000006933) col10a1a (ENSHBUG00000006937) fhl5 (ENSHBUG00000006967) ENSHBUG00000006983 fut9a (ENSHBUG00000007402) fut9a (ENSHBUG00000007442) manea (ENSHBUG00000007449) ppp1cb (ENSHBUG00000007479) ypel5 (ENSHBUG00000007493) Burton s mouthbrooder MODERN SPECIES 292 ENSHBUG00000002949 MARCHF4 (ENSHBUG00000000068) SMARCAL1 (ENSHBUG00000002973) nme9 (ENSHBUG00000003004) zgc:162707 (ENSHBUG00000003020) ehhadh (ENSHBUG00000003028) tmem41aa (ENSHBUG00000003047) igf2bp2a (ENSHBUG00000003126) tra2b (ENSHBUG00000003145) ENSHBUG00000003161 ENSHBUG00000003190 ANKZF1 (ENSHBUG00000003208) glb1l (ENSHBUG00000003243) ENSHBUG00000003332 ENSHBUG00000003346 #21 sumo3b (ENSHBUG00000003354) #22 FMNL2 (ENSHBUG00000003572) prpf40a (ENSHBUG00000003620) rprmb (ENSHBUG00000003639) GALNT13 (ENSHBUG00000003682) KCNJ3 (ENSHBUG00000003700) nr4a2a (ENSHBUG00000003713) GALNT5 (ENSHBUG00000003828) CYTIP (ENSHBUG00000003859) ACVR1C (ENSHBUG00000003896) ENSHBUG00000003930 upp2 (ENSHBUG00000003922) ENSHBUG00000004035 PKP4 (ENSHBUG00000004178) dap1b (ENSHBUG00000004199) ENSHBUG00000004409 Haplochromini_A ANCESTRAL SPECIES 7 ENSGT00390000012355.A.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT00990000204856 ENSGT00940000158431.a.a.a.a.a.b.b.c.b ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.h ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a Haplochromini_B ANCESTRAL SPECIES 13 ENSGT00390000012355.A.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT00990000204856 ENSGT00940000158431.a.a.a.a.a.b.b.c.b ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.h ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a Zebra mbuna MODERN SPECIES 1101 ENSMZEG00005000836 ENSMZEG00005000851 d2hgdh (ENSMZEG00005000872) acvr1l (ENSMZEG00005000913) otomp (ENSMZEG00005000963) hs6st1b (ENSMZEG00005000997) uggt1 (ENSMZEG00005001047) ENSMZEG00005001190 ola1 (ENSMZEG00005001203) TRA2B (ENSMZEG00005001232) ENSMZEG00005001241 pcnt (ENSMZEG00005001272) atg9a (ENSMZEG00005001449) ENSMZEG00005001497 ENSMZEG00005001609 #21 sumo3b (ENSMZEG00005001623) #22 TSPEAR (ENSMZEG00005001651) ENSMZEG00005001723 fabp7a (ENSMZEG00005001820) ENSMZEG00005001830 ENSMZEG00005001839 ENSMZEG00005001857 fyna (ENSMZEG00005001875) marcksb (ENSMZEG00005001901) col10a1a (ENSMZEG00005001936) ENSMZEG00005001944 fhl5 (ENSMZEG00005001974) fut9a (ENSMZEG00005001980) fut9a (ENSMZEG00005001994) manea (ENSMZEG00005001998) ppp1cb (ENSMZEG00005002009) Eastern happy MODERN SPECIES 10 ENSACLG00000010684 ENSACLG00000010689 d2hgdh (ENSACLG00000010697) acvr1l (ENSACLG00000010712) otomp (ENSACLG00000010733) hs6st1b (ENSACLG00000010812) uggt1 (ENSACLG00000010862) ENSACLG00000011044 ola1 (ENSACLG00000011067) TRA2B (ENSACLG00000011095) ENSACLG00000011110 pcnt (ENSACLG00000011373) atg9a (ENSACLG00000011454) ENSACLG00000011479 ENSACLG00000011512 #21 sumo3b (ENSACLG00000011519) #22 TSPEAR (ENSACLG00000011526) ENSACLG00000011534 fabp7a (ENSACLG00000011625) ENSACLG00000011640 ENSACLG00000011645 ENSACLG00000011656 fyna (ENSACLG00000011671) marcksb (ENSACLG00000011685) col10a1a (ENSACLG00000011735) ENSACLG00000011744 fhl5 (ENSACLG00000011881) fut9a (ENSACLG00000011904) fut9a (ENSACLG00000011960) manea (ENSACLG00000011971) ppp1cb (ENSACLG00000011991) P. nyererei DUPLICATION P. nyererei MODERN SPECIES 305 ENSPNYG00000014566 ENSPNYG00000014576 d2hgdh (ENSPNYG00000014600) acvr1l (ENSPNYG00000014634) otomp (ENSPNYG00000014659) hs6st1b (ENSPNYG00000014686) uggt1 (ENSPNYG00000014757) ENSPNYG00000014919 ola1 (ENSPNYG00000014943) TRA2B (ENSPNYG00000014955) ENSPNYG00000014980 pcnt (ENSPNYG00000015024) atg9a (ENSPNYG00000015233) ENSPNYG00000015305 ENSPNYG00000015393 #21 sumo3b (ENSPNYG00000015401) #22 TSPEAR (ENSPNYG00000015434) ENSPNYG00000015549 fabp7a (ENSPNYG00000015683) ENSPNYG00000016064 ENSPNYG00000016076 fyna (ENSPNYG00000016098) marcksb (ENSPNYG00000016118) col10a1a (ENSPNYG00000016146) ENSPNYG00000016160 fhl5 (ENSPNYG00000016197) fut9a (ENSPNYG00000016223) manea (ENSPNYG00000016243) ppp1cb (ENSPNYG00000016253) ENSPNYG00000016290 ypel5 (ENSPNYG00000016313) P. nyererei MODERN SPECIES 304 MARCHF4 (ENSPNYG00000000999) SMARCAL1 (ENSPNYG00000001058) ENSPNYG00000001099 nme9 (ENSPNYG00000001110) zgc:162707 (ENSPNYG00000001153) ehhadh (ENSPNYG00000001157) ENSPNYG00000001166 igf2bp2a (ENSPNYG00000001187) tra2b (ENSPNYG00000001238) ENSPNYG00000001248 ENSPNYG00000001277 ANKZF1 (ENSPNYG00000001310) glb1l (ENSPNYG00000001327) ENSPNYG00000001380 ENSPNYG00000001489 #21 ENSPNYG00000001495 #22 FMNL2 (ENSPNYG00000001529) prpf40a (ENSPNYG00000001659) rprmb (ENSPNYG00000001860) GALNT13 (ENSPNYG00000001888) KCNJ3 (ENSPNYG00000001943) nr4a2a (ENSPNYG00000001957) GALNT5 (ENSPNYG00000001992) CYTIP (ENSPNYG00000002106) ACVR1C (ENSPNYG00000002117) ACVR1 (ENSPNYG00000002148) ENSPNYG00000002186 upp2 (ENSPNYG00000002209) CCDC148 (ENSPNYG00000002242) PKP4 (ENSPNYG00000002278) dap1b (ENSPNYG00000002343) Nile tilapia DUPLICATION Nile tilapia MODERN SPECIES 10 ENSONIG00000031220 ENSONIG00000001226 d2hgdh (ENSONIG00000001232) acvr1l (ENSONIG00000001235) otomp (ENSONIG00000001240) ENSONIG00000034367 hs6st1b (ENSONIG00000001241) uggt1 (ENSONIG00000001242) ENSONIG00000001262 ola1 (ENSONIG00000001265) TRA2B (ENSONIG00000001274) ENSONIG00000034409 ENSONIG00000039936 atg9a (ENSONIG00000001285) ENSONIG00000001298 ENSONIG00000032503 #22 TSPEAR (ENSONIG00000001315) ENSONIG00000001318 fabp7a (ENSONIG00000001326) ENSONIG00000040058 ENSONIG00000030616 fyna (ENSONIG00000001335) marcksb (ENSONIG00000042894) col10a1a (ENSONIG00000001340) ENSONIG00000001342 fhl5 (ENSONIG00000001347) fut9a (ENSONIG00000040651) fut9a (ENSONIG00000031215) manea (ENSONIG00000001351) ppp1cb (ENSONIG00000001356) ypel5 (ENSONIG00000001358) Nile tilapia MODERN SPECIES 7 ENSONIG00000036866 MARCHF4 (ENSONIG00000009038) SMARCAL1 (ENSONIG00000009036) nme9 (ENSONIG00000009034) zgc:162707 (ENSONIG00000029797) ehhadh (ENSONIG00000036880) tmem41aa (ENSONIG00000040431) igf2bp2a (ENSONIG00000009029) tra2b (ENSONIG00000009025) ENSONIG00000009023 ENSONIG00000009020 ANKZF1 (ENSONIG00000009018) glb1l (ENSONIG00000009015) ENSONIG00000009002 pttg1ipb (ENSONIG00000008999) sumo3b (ENSONIG00000001312) #22 FMNL2 (ENSONIG00000008993) prpf40a (ENSONIG00000008986) rprmb (ENSONIG00000021106) GALNT13 (ENSONIG00000008980) KCNJ3 (ENSONIG00000040559) nr4a2a (ENSONIG00000008976) ENSONIG00000039674 GALNT5 (ENSONIG00000008975) CYTIP (ENSONIG00000008973) ACVR1C (ENSONIG00000008966) ENSONIG00000008955 ENSONIG00000042262 upp2 (ENSONIG00000008958) PKP4 (ENSONIG00000008949) dapl1 (ENSONIG00000035634) Atherinomorphae ANCESTRAL SPECIES 11 ENSGT00390000012355.A.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.f ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 ENSGT00940000154800.k.a ENSGT00950000182836.a Cyprinodontiformes ANCESTRAL SPECIES 21 ENSGT00390000012355.A.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.f ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 ENSGT00940000154800.k.a ENSGT00950000182836.a ENSGT00390000009189 Aplocheiloidei ANCESTRAL SPECIES 6 ENSGT00940000155682.g.a #12 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00940000159241.q.b ENSGT00940000159241.r ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT01030000235131 ENSGT00940000161094 ENSGT00940000153988.A ENSGT00940000155773.b Mangrove rivulus DUPLICATION Mangrove rivulus MODERN SPECIES 78 COL6A2 (ENSKMAG00000011962) #12 MARCHF4 (ENSKMAG00000012001) SMARCAL1 (ENSKMAG00000012023) nme9 (ENSKMAG00000012056) zgc:162707 (ENSKMAG00000012092) ehhadh (ENSKMAG00000012099) tmem41aa (ENSKMAG00000012117) igf2bp2a (ENSKMAG00000012177) tra2b (ENSKMAG00000012273) ENSKMAG00000012295 ENSKMAG00000012311 ANKZF1 (ENSKMAG00000012399) glb1l (ENSKMAG00000012339) ENSKMAG00000012478 ENSKMAG00000012654 #21 ENSKMAG00000012668 #22 FMNL2 (ENSKMAG00000012719) prpf40a (ENSKMAG00000012973) rprmb (ENSKMAG00000013018) GALNT13 (ENSKMAG00000013059) KCNJ3 (ENSKMAG00000013136) nr4a2a (ENSKMAG00000013152) ENSKMAG00000013177 ENSKMAG00000013184 CYTIP (ENSKMAG00000013205) ACVR1C (ENSKMAG00000013222) ENSKMAG00000013267 ENSKMAG00000013309 upp2 (ENSKMAG00000013333) CCDC148 (ENSKMAG00000013353) PKP4 (ENSKMAG00000013437) Mangrove rivulus MODERN SPECIES 1 ENSKMAG00000012923 ELL (ENSKMAG00000012864) d2hgdh (ENSKMAG00000012828) acvr1l (ENSKMAG00000012798) otomp (ENSKMAG00000012763) hs6st1b (ENSKMAG00000012735) uggt1 (ENSKMAG00000012658) ENSKMAG00000012621 ola1 (ENSKMAG00000012576) TRA2B (ENSKMAG00000012538) pcnt (ENSKMAG00000012283) atg9a (ENSKMAG00000012147) ENSKMAG00000012112 ENSKMAG00000012048 ENSKMAG00000012027 #21 sumo3b (ENSKMAG00000012006) #22 TSPEAR (ENSKMAG00000011978) ENSKMAG00000011865 fabp7a (ENSKMAG00000011821) fyna (ENSKMAG00000011800) marcksb (ENSKMAG00000011785) col10a1a (ENSKMAG00000011777) fhl5 (ENSKMAG00000011760) fut9a (ENSKMAG00000011748) fut9a (ENSKMAG00000011734) manea (ENSKMAG00000011704) ppp1cb (ENSKMAG00000011679) ypel5 (ENSKMAG00000011660) lclat1 (ENSKMAG00000011632) lbh (ENSKMAG00000011612) bmp4 (ENSKMAG00000011597) Cyprinodontoidei ANCESTRAL SPECIES 8 ENSGT00390000012355.A.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.f.d ENSGT00940000155095.i.a.f.c ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 ENSGT00940000154800.k.a ENSGT00950000182836.a Poeciliinae ANCESTRAL SPECIES 8 ENSGT00390000012355.A.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n.f ENSGT00940000156713.n.e ENSGT01090000260229 ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.f.d.c ENSGT00940000155095.i.a.f.c ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 ENSGT00940000154800.k.a Platyfish MODERN SPECIES 10 SSBP4 (ENSXMAG00000025419) ENSXMAG00000010020 ENSXMAG00000009984 acvr1l (ENSXMAG00000024794) otomp (ENSXMAG00000009978) hs6st1b (ENSXMAG00000009977) uggt1 (ENSXMAG00000009880) ENSXMAG00000009872 ola1 (ENSXMAG00000009840) TRA2B (ENSXMAG00000009835) ENSXMAG00000009832 pcnt (ENSXMAG00000009826) atg9a (ENSXMAG00000009801) ENSXMAG00000009757 ENSXMAG00000009754 #21 sumo3b (ENSXMAG00000026869) #22 TSPEAR (ENSXMAG00000009750) fabp7a (ENSXMAG00000009747) ENSXMAG00000009748 fabp7a (ENSXMAG00000009736) ENSXMAG00000021917 ENSXMAG00000009743 fyna (ENSXMAG00000009720) marcksb (ENSXMAG00000021623) col10a1a (ENSXMAG00000020162) fhl5 (ENSXMAG00000000710) fut9a (ENSXMAG00000000713) fut9a (ENSXMAG00000023977) fut9a (ENSXMAG00000029399) fut9a (ENSXMAG00000029184) manea (ENSXMAG00000009709) Poecilia ANCESTRAL SPECIES 10 ENSGT00390000012355.A.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n.f ENSGT00940000156713.n.e ENSGT01090000260229 ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.f.d.c ENSGT00940000155095.i.a.f.d.d.a ENSGT00940000155095.i.a.f.c ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 Guppy MODERN SPECIES 453 TMEM151B (ENSPREG00000005318) ENSPREG00000005334 utp25 (ENSPREG00000005340) ENSPREG00000005386 adprs (ENSPREG00000005535) ENSPREG00000005546 uggt1 (ENSPREG00000005619) ENSPREG00000005818 ola1 (ENSPREG00000005840) TRA2B (ENSPREG00000005879) ENSPREG00000005907 pcnt (ENSPREG00000005947) atg9a (ENSPREG00000006117) ENSPREG00000006160 ENSPREG00000006205 sumo3b (ENSPREG00000006212) #22 TSPEAR (ENSPREG00000006227) ENSPREG00000006247 fabp7a (ENSPREG00000006283) fabp7a (ENSPREG00000006428) ENSPREG00000006643 fyna (ENSPREG00000006673) marcksb (ENSPREG00000006707) col10a1a (ENSPREG00000006734) fhl5 (ENSPREG00000006746) fut9a (ENSPREG00000006773) fut9a (ENSPREG00000006790) ENSPREG00000006832 manea (ENSPREG00000006846) ppp1cb (ENSPREG00000006862) ypel5 (ENSPREG00000006884) NAME_6 ANCESTRAL SPECIES 3 ENSGT00390000012355.A.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n.f ENSGT00940000156713.n.e ENSGT01090000260229 ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.f.d.c ENSGT00940000155095.i.a.f.d.d.a ENSGT00940000155095.i.a.f.c ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 Amazon molly DUPLICATION Amazon molly MODERN SPECIES 507 zgc:162707 (ENSPFOG00000007710) ehhadh (ENSPFOG00000007605) tmem41aa (ENSPFOG00000007558) igf2bp2a (ENSPFOG00000007221) tra2b (ENSPFOG00000007144) ENSPFOG00000007073 ENSPFOG00000007022 ANKZF1 (ENSPFOG00000006877) glb1l (ENSPFOG00000006508) ENSPFOG00000005639 ENSPFOG00000005608 #21 sumo3b (ENSPFOG00000022520) #22 FMNL2 (ENSPFOG00000005381) prpf40a (ENSPFOG00000004792) rprmb (ENSPFOG00000020712) GALNT13 (ENSPFOG00000004447) KCNJ3 (ENSPFOG00000004381) nr4a2a (ENSPFOG00000004317) ENSPFOG00000023115 GALNT5 (ENSPFOG00000004267) CYTIP (ENSPFOG00000004187) ACVR1C (ENSPFOG00000004103) ENSPFOG00000003858 ENSPFOG00000003842 upp2 (ENSPFOG00000003712) ENSPFOG00000003561 PKP4 (ENSPFOG00000024727) Amazon molly MODERN SPECIES 260 ENSPFOG00000016740 ENSPFOG00000016714 d2hgdh (ENSPFOG00000016660) acvr1l (ENSPFOG00000016625) otomp (ENSPFOG00000016598) hs6st1b (ENSPFOG00000016587) uggt1 (ENSPFOG00000016300) ENSPFOG00000016261 ola1 (ENSPFOG00000016213) TRA2B (ENSPFOG00000016208) ENSPFOG00000016205 pcnt (ENSPFOG00000016128) atg9a (ENSPFOG00000016076) ENSPFOG00000015993 ENSPFOG00000015983 #21 ENSPFOG00000015982 #22 TSPEAR (ENSPFOG00000015928) ENSPFOG00000015786 fabp7a (ENSPFOG00000015765) fabp7a (ENSPFOG00000015760) ENSPFOG00000023764 fyna (ENSPFOG00000015722) marcksb (ENSPFOG00000015715) col10a1a (ENSPFOG00000015712) fhl5 (ENSPFOG00000015681) fhl5 (ENSPFOG00000015669) fut9a (ENSPFOG00000020422) fut9a (ENSPFOG00000020421) fut9a (ENSPFOG00000015664) manea (ENSPFOG00000015646) ppp1cb (ENSPFOG00000015626) Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 897 uggt1 (ENSPLAG00000016547) ENSPLAG00000016589 ola1 (ENSPLAG00000016640) TRA2B (ENSPLAG00000016709) ENSPLAG00000016723 pcnt (ENSPLAG00000016921) atg9a (ENSPLAG00000016977) ENSPLAG00000017000 ENSPLAG00000017027 ENSPLAG00000017040 #21 sumo3b (ENSPLAG00000017048) #22 TSPEAR (ENSPLAG00000017128) ENSPLAG00000017142 fabp7a (ENSPLAG00000017148) fabp7a (ENSPLAG00000017152) Sailfin molly MODERN SPECIES 538 ENSPLAG00000014971 tra2b (ENSPLAG00000014979) ENSPLAG00000015005 ENSPLAG00000015066 ANKZF1 (ENSPLAG00000015082) glb1l (ENSPLAG00000015140) ENSPLAG00000015263 ENSPLAG00000015273 ENSPLAG00000015292 #22 FMNL2 (ENSPLAG00000015396) prpf40a (ENSPLAG00000015430) rprmb (ENSPLAG00000015449) GALNT13 (ENSPLAG00000015502) NAME_4 ANCESTRAL SPECIES 160 ENSGT00390000012355.A.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.f.d Mummichog MODERN SPECIES 2458 d2hgdh (ENSFHEG00000008746) acvr1l (ENSFHEG00000008759) otomp (ENSFHEG00000008795) hs6st1b (ENSFHEG00000008842) uggt1 (ENSFHEG00000008962) ENSFHEG00000008973 ola1 (ENSFHEG00000009030) TRA2B (ENSFHEG00000009235) ENSFHEG00000009260 ENSFHEG00000009269 pcnt (ENSFHEG00000009485) tbce (ENSFHEG00000000220) atg9a (ENSFHEG00000009644) ENSFHEG00000009764 ENSFHEG00000009781 #21 sumo3b (ENSFHEG00000009799) #22 TSPEAR (ENSFHEG00000009810) ENSFHEG00000009827 fabp7a (ENSFHEG00000009837) ENSFHEG00000009852 ENSFHEG00000009869 fyna (ENSFHEG00000009938) marcksb (ENSFHEG00000009956) col10a1a (ENSFHEG00000009962) fhl5 (ENSFHEG00000009976) fut9a (ENSFHEG00000010159) Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 286 zgc:162707 (ENSCVAG00000004706) ehhadh (ENSCVAG00000004692) tmem41aa (ENSCVAG00000004681) igf2bp2a (ENSCVAG00000004656) tra2b (ENSCVAG00000004587) ENSCVAG00000000971 ENSCVAG00000004573 ANKZF1 (ENSCVAG00000004564) glb1l (ENSCVAG00000004531) ENSCVAG00000004519 ENSCVAG00000004505 ENSCVAG00000004445 #21 SUMO3 (ENSCVAG00000004438) #22 FMNL2 (ENSCVAG00000004421) prpf40a (ENSCVAG00000004275) rprmb (ENSCVAG00000004254) GALNT13 (ENSCVAG00000004241) KCNJ3 (ENSCVAG00000004197) nr4a2a (ENSCVAG00000004188) GALNT5 (ENSCVAG00000004167) CYTIP (ENSCVAG00000004002) ACVR1C (ENSCVAG00000003992) ENSCVAG00000003967 ENSCVAG00000003938 upp2 (ENSCVAG00000003929) ENSCVAG00000003922 PKP4 (ENSCVAG00000003890) Sheepshead minnow MODERN SPECIES 714 hs6st1b (ENSCVAG00000004175) uggt1 (ENSCVAG00000004143) ENSCVAG00000003995 ola1 (ENSCVAG00000003966) TRA2B (ENSCVAG00000003909) ENSCVAG00000003894 pcnt (ENSCVAG00000003848) atg9a (ENSCVAG00000003531) ENSCVAG00000003466 ENSCVAG00000003391 #21 ENSCVAG00000003382 #22 TSPEAR (ENSCVAG00000003372) ENSCVAG00000003361 fabp7a (ENSCVAG00000003322) ENSCVAG00000003317 fyna (ENSCVAG00000003307) marcksb (ENSCVAG00000003267) col10a1a (ENSCVAG00000003260) fhl5 (ENSCVAG00000003254) Percomorphaceae_C ANCESTRAL SPECIES 13 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Eupercaria ANCESTRAL SPECIES 25 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k.n #22 ENSGT00940000168354 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Eupecaria_A ANCESTRAL SPECIES 24 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k.n #22 ENSGT00940000168354 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Ballan wrasse MODERN SPECIES 404 pttg1ipb (ENSLBEG00000020613) ENSLBEG00000020646 #22 FMNL2 (ENSLBEG00000020682) prpf40a (ENSLBEG00000020799) rprmb (ENSLBEG00000020930) GALNT13 (ENSLBEG00000020972) KCNJ3 (ENSLBEG00000021042) nr4a2a (ENSLBEG00000021057) GALNT5 (ENSLBEG00000021125) ENSLBEG00000021305 CYTIP (ENSLBEG00000021319) ACVR1C (ENSLBEG00000021355) ENSLBEG00000021415 ENSLBEG00000021470 upp2 (ENSLBEG00000021488) ENSLBEG00000021527 Eupecaria_B ANCESTRAL SPECIES ENSGT00950000182895.a.b.u.b #22 Eupecaria_C ANCESTRAL SPECIES 24 ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k.n #22 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A ENSGT00940000155773.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 24 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k.n #22 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A ENSGT00940000155773.b Large yellow croaker MODERN SPECIES 490 nme9 (ENSLCRG00005009804) zgc:162707 (ENSLCRG00005009805) ehhadh (ENSLCRG00005009806) tmem41aa (ENSLCRG00005009808) igf2bp2a (ENSLCRG00005009811) ENSLCRG00005010177 tra2b (ENSLCRG00005010179) ENSLCRG00005010183 ENSLCRG00005010188 ANKZF1 (ENSLCRG00005010191) glb1l (ENSLCRG00005010230) ENSLCRG00005012252 ENSLCRG00005012717 #21 ENSLCRG00005012718 ##22 ENSLCRG00005012722 ENSLCRG00005012724 #22 FMNL2 (ENSLCRG00005012775) ENSLCRG00005016128 prpf40a (ENSLCRG00005016144) rprmb (ENSLCRG00005017705) GALNT13 (ENSLCRG00005017713) KCNJ3 (ENSLCRG00005017944) nr4a2a (ENSLCRG00005017945) ENSLCRG00005017946 ENSLCRG00005017947 ITGA4 (ENSLCRG00005017949) cerkl (ENSLCRG00005017953) neurod1 (ENSLCRG00005017954) ENSLCRG00005017955 RAPH1 (ENSLCRG00005017966) rif1 (ENSLCRG00005018150) Percomorphaceae_D ANCESTRAL SPECIES 12 ENSGT01030000235116 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Carangaria ANCESTRAL SPECIES 12 ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a.f ENSGT00940000164909.e.a.e ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Carangaria_A ANCESTRAL SPECIES 11 ENSGT01030000235116 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a.f ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Barramundi perch MODERN SPECIES 142 MARCHF4 (ENSLCAG00010023784) SMARCAL1 (ENSLCAG00010023788) nme9 (ENSLCAG00010023799) zgc:162707 (ENSLCAG00010023808) ehhadh (ENSLCAG00010023810) tmem41aa (ENSLCAG00010023814) igf2bp2a (ENSLCAG00010023821) tra2b (ENSLCAG00010023836) ENSLCAG00010023840 ENSLCAG00010023844 ANKZF1 (ENSLCAG00010023848) ENSLCAG00010023852 glb1l (ENSLCAG00010023912) ENSLCAG00010024031 pttg1ipb (ENSLCAG00010024070) sumo3b (ENSLCAG00010024086) #22 FMNL2 (ENSLCAG00010024156) prpf40a (ENSLCAG00010024203) rprmb (ENSLCAG00010024312) GALNT13 (ENSLCAG00010024346) KCNJ3 (ENSLCAG00010024414) nr4a2a (ENSLCAG00010024428) ENSLCAG00010024433 GALNT5 (ENSLCAG00010024467) ENSLCAG00010024518 CYTIP (ENSLCAG00010024522) ACVR1C (ENSLCAG00010024528) ENSLCAG00010024537 ENSLCAG00010024542 upp2 (ENSLCAG00010024544) CCDC148 (ENSLCAG00010024546) Seriola ANCESTRAL SPECIES 6 ENSGT01030000235116 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a.f ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Yellowtail amberjack MODERN SPECIES 2388 MARCHF4 (ENSSLDG00000007291) SMARCAL1 (ENSSLDG00000007224) nme9 (ENSSLDG00000007187) zgc:162707 (ENSSLDG00000007170) ehhadh (ENSSLDG00000007146) tmem41aa (ENSSLDG00000007119) igf2bp2a (ENSSLDG00000007046) tra2b (ENSSLDG00000007005) ENSSLDG00000006947 ENSSLDG00000006914 ANKZF1 (ENSSLDG00000006877) glb1l (ENSSLDG00000006777) ENSSLDG00000006737 ENSSLDG00000006621 ENSSLDG00000006596 #21 sumo3b (ENSSLDG00000006583) #22 FMNL2 (ENSSLDG00000006527) prpf40a (ENSSLDG00000006462) rprmb (ENSSLDG00000006442) GALNT13 (ENSSLDG00000006372) KCNJ3 (ENSSLDG00000006337) nr4a2a (ENSSLDG00000006303) ENSSLDG00000006252 ENSSLDG00000006227 GALNT5 (ENSSLDG00000006129) CYTIP (ENSSLDG00000006085) ACVR1C (ENSSLDG00000006052) ENSSLDG00000006006 ENSSLDG00000005975 upp2 (ENSSLDG00000005944) ENSSLDG00000005917 Greater amberjack MODERN SPECIES 21 MARCHF4 (ENSSDUG00000017455) SMARCAL1 (ENSSDUG00000017470) nme9 (ENSSDUG00000017498) ENSSDUG00000017536 zgc:162707 (ENSSDUG00000017544) ehhadh (ENSSDUG00000017550) tmem41aa (ENSSDUG00000017558) igf2bp2a (ENSSDUG00000017581) tra2b (ENSSDUG00000017670) ENSSDUG00000017678 ENSSDUG00000017705 ANKZF1 (ENSSDUG00000017724) glb1l (ENSSDUG00000017744) ENSSDUG00000017812 ENSSDUG00000017892 #21 ENSSDUG00000017903 #22 FMNL2 (ENSSDUG00000017925) prpf40a (ENSSDUG00000018063) rprmb (ENSSDUG00000018139) GALNT13 (ENSSDUG00000018149) KCNJ3 (ENSSDUG00000018189) nr4a2a (ENSSDUG00000018206) ENSSDUG00000018225 GALNT5 (ENSSDUG00000018255) CYTIP (ENSSDUG00000018289) ACVR1C (ENSSDUG00000018316) ENSSDUG00000018358 ENSSDUG00000018404 upp2 (ENSSDUG00000018460) CCDC148 (ENSSDUG00000018485) PKP4 (ENSSDUG00000018522) Anabantaria ANCESTRAL SPECIES 14 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000160160 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 Anabantoidei ANCESTRAL SPECIES 13 ENSGT00940000155682.g.a #12 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000160160 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Climbing perch MODERN SPECIES 12 MARCHF4 (ENSATEG00000020649) SMARCAL1 (ENSATEG00000020624) nme9 (ENSATEG00000020557) ENSATEG00000029040 zgc:162707 (ENSATEG00000025802) ehhadh (ENSATEG00000020518) tmem41aa (ENSATEG00000020502) igf2bp2a (ENSATEG00000020389) tra2b (ENSATEG00000020354) ENSATEG00000020337 ENSATEG00000020302 ENSATEG00000020278 glb1l (ENSATEG00000020221) ENSATEG00000020110 ENSATEG00000020076 #21 ENSATEG00000025684 #22 FMNL2 (ENSATEG00000019742) prpf40a (ENSATEG00000019682) RPRM (ENSATEG00000019661) GALNT13 (ENSATEG00000019632) KCNJ3 (ENSATEG00000025852) nr4a2a (ENSATEG00000019598) ENSATEG00000019568 GALNT5 (ENSATEG00000019155) CYTIP (ENSATEG00000019083) ACVR1C (ENSATEG00000019070) ENSATEG00000019010 ENSATEG00000018984 ENSATEG00000018973 UPP2 (ENSATEG00000018949) CCDC148 (ENSATEG00000018940) Siamese fighting fish DUPLICATION Siamese fighting fish MODERN SPECIES 12 ENSBSLG00000022810 d2hgdh (ENSBSLG00000022516) acvr1l (ENSBSLG00000022490) otomp (ENSBSLG00000022464) hs6st1b (ENSBSLG00000022354) uggt1 (ENSBSLG00000022072) ENSBSLG00000022019 ola1 (ENSBSLG00000021790) TRA2B (ENSBSLG00000021742) ENSBSLG00000021705 pcnt (ENSBSLG00000021205) zgc:112416 (ENSBSLG00000020378) atg9a (ENSBSLG00000019864) ENSBSLG00000019483 ENSBSLG00000019463 #21 ENSBSLG00000019412 #22 TSPEAR (ENSBSLG00000019301) ENSBSLG00000019215 fabp7a (ENSBSLG00000019185) ENSBSLG00000018976 fyna (ENSBSLG00000017694) marcksb (ENSBSLG00000017635) col10a1a (ENSBSLG00000017628) ENSBSLG00000017605 fhl5 (ENSBSLG00000017572) fut9a (ENSBSLG00000017559) manea (ENSBSLG00000017553) ppp1cb (ENSBSLG00000017058) ypel5 (ENSBSLG00000024875) lclat1 (ENSBSLG00000024868) lbh (ENSBSLG00000024858) Siamese fighting fish MODERN SPECIES 11 COL6A2 (ENSBSLG00000007732) #12 MARCHF4 (ENSBSLG00000007287) SMARCAL1 (ENSBSLG00000006782) nme9 (ENSBSLG00000006456) zgc:162707 (ENSBSLG00000006279) ehhadh (ENSBSLG00000005946) tmem41aa (ENSBSLG00000005941) igf2bp2a (ENSBSLG00000005124) tra2b (ENSBSLG00000004950) ENSBSLG00000004919 ENSBSLG00000026238 glb1l (ENSBSLG00000026206) ANKZF1 (ENSBSLG00000026199) ENSBSLG00000026166 ENSBSLG00000026160 #21 sumo3b (ENSBSLG00000026155) #22 FMNL2 (ENSBSLG00000026029) prpf40a (ENSBSLG00000025774) rprmb (ENSBSLG00000025760) GALNT13 (ENSBSLG00000025741) KCNJ3 (ENSBSLG00000025732) nr4a2a (ENSBSLG00000025713) ENSBSLG00000025701 GALNT5 (ENSBSLG00000025561) CYTIP (ENSBSLG00000025532) ACVR1C (ENSBSLG00000025513) ACVR1 (ENSBSLG00000025454) ENSBSLG00000025432 upp2 (ENSBSLG00000025417) CCDC148 (ENSBSLG00000025397) PKP4 (ENSBSLG00000024795) Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 13 MARCHF4 (ENSMMDG00005011767) SMARCAL1 (ENSMMDG00005011782) ENSMMDG00005012370 nme9 (ENSMMDG00005012373) zgc:162707 (ENSMMDG00005012376) ehhadh (ENSMMDG00005012377) tmem41aa (ENSMMDG00005012383) igf2bp2a (ENSMMDG00005012390) tra2b (ENSMMDG00005012404) ENSMMDG00005012405 ENSMMDG00005012414 ANKZF1 (ENSMMDG00005012419) glb1l (ENSMMDG00005012497) ENSMMDG00005015828 ENSMMDG00005015861 #21 sumo3b (ENSMMDG00005015867) #22 FMNL2 (ENSMMDG00005015888) prpf40a (ENSMMDG00005016028) rprmb (ENSMMDG00005018898) GALNT13 (ENSMMDG00005018908) KCNJ3 (ENSMMDG00005019236) nr4a2a (ENSMMDG00005019238) GPD2 (ENSMMDG00005019248) GALNT5 (ENSMMDG00005019585) ENSMMDG00005019589 CYTIP (ENSMMDG00005019593) ACVR1C (ENSMMDG00005019596) ENSMMDG00005019599 ENSMMDG00005019600 upp2 (ENSMMDG00005019606) CCDC148 (ENSMMDG00005019711) Pinecone sodierfish MODERN SPECIES 14 ENSMMDG00005023097 d2hgdh (ENSMMDG00005023110) acvr1l (ENSMMDG00005023119) otomp (ENSMMDG00005023121) hs6st1b (ENSMMDG00005023123) uggt1 (ENSMMDG00005023163) ENSMMDG00005023493 ola1 (ENSMMDG00005007174) TRA2B (ENSMMDG00005007194) ENSMMDG00005007197 ENSMMDG00005007208 zgc:112416 (ENSMMDG00005007217) atg9a (ENSMMDG00005007226) ENSMMDG00005007261 ENSMMDG00005007292 #21 ENSMMDG00005007298 #22 TSPEAR (ENSMMDG00005007303) ENSMMDG00005007309 fabp7a (ENSMMDG00005007318) ENSMMDG00005007332 fyna (ENSMMDG00005007339) marcksb (ENSMMDG00005007788) col10a1a (ENSMMDG00005007791) ENSMMDG00005007792 fhl5 (ENSMMDG00005007795) fut9a (ENSMMDG00005007797) manea (ENSMMDG00005007799) ppp1cb (ENSMMDG00005007815) ENSMMDG00005008164 ypel5 (ENSMMDG00005008173) lclat1 (ENSMMDG00005008174) Osteoglossiformes ANCESTRAL SPECIES 79 ENSGT00940000155682.g.a #12 ENSGT00940000162889.a #13 ENSGT00940000158179 ENSGT00390000006618 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.eb ENSGT00940000155489.a ENSGT00390000011514 ENSGT00940000161051.a.a.a.a.b ENSGT00390000014839.b ENSGT00390000005911 ENSGT00940000164909.c ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v #22 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000158193 #23 ENSGT00510000047718.c.b ENSGT00940000157267 ENSGT00940000156449.c ENSGT00950000183046.a.a.fb ENSGT00390000005530.a.a.k ENSGT00930000150950.b ENSGT00940000154319.c.a ENSGT00940000158239.a.b.b ENSGT00940000155861.C.e ENSGT00940000156444.f ENSGT00390000005159.k ENSGT00500000044939 ENSGT00940000156089 ENSGT00940000156552.c.a.g P. kingsleyae MODERN SPECIES 35 TMEM169 (ENSPKIG00000010060) COL6A2 (ENSPKIG00000010019) #12 COL6A1 (ENSPKIG00000009956) #13 marchf4l (ENSPKIG00000009933) zgc:162707 (ENSPKIG00000009919) tmem41aa (ENSPKIG00000009907) igf2bp2b (ENSPKIG00000009855) TRA2B (ENSPKIG00000009810) ENSPKIG00000009766 zgc:112416 (ENSPKIG00000009752) ENSPKIG00000009623 atg9a (ENSPKIG00000009492) ANKZF1 (ENSPKIG00000009427) ENSPKIG00000009236 ENSPKIG00000009145 #21 sumo3b (ENSPKIG00000009126) #22 ube2g2 (ENSPKIG00000009101) #23 TSPEAR (ENSPKIG00000009073) ENSPKIG00000009015 BMPR2 (ENSPKIG00000008953) fam117bb (ENSPKIG00000008905) wdr12 (ENSPKIG00000008839) sumo1 (ENSPKIG00000008789) ENSPKIG00000008769 FZD7 (ENSPKIG00000008751) ENSPKIG00000008738 ALS2 (ENSPKIG00000008582) MPP4 (ENSPKIG00000008511) TMEM237 (ENSPKIG00000008472) cyp20a1 (ENSPKIG00000008410) ABI2 (ENSPKIG00000008314) Osteoglossocephalai ANCESTRAL SPECIES 56 ENSGT00940000164537 ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000162528 ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909 ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v #22 ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000158193 #23 ENSGT00510000047718.d ENSGT00510000047718.c ENSGT00940000157267 Osteoglossiformes ANCESTRAL SPECIES 79 ENSGT00390000015276 ENSGT00940000155682.g.a #12 ENSGT00940000162889.a #13 ENSGT00940000158179 ENSGT00390000006618 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.eb ENSGT00940000155489.a ENSGT00390000011514 ENSGT00940000161051.a.a.a.a.b ENSGT00390000014839.b ENSGT00390000005911 ENSGT00940000164909.c ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v #22 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000158193 #23 ENSGT00510000047718.c.b ENSGT00940000157267 ENSGT00940000156449.c ENSGT00950000183046.a.a.fb ENSGT00390000005530.a.a.k ENSGT00930000150950.b ENSGT00940000154319.c.a ENSGT00940000158239.a.b.b ENSGT00940000155861.C.e ENSGT00940000156444.f ENSGT00390000005159.k ENSGT00500000044939 ENSGT00940000156089 Asian bonytongue MODERN SPECIES 5 ENSSFOG00015024992 COL6A1 (ENSSFOG00015007912) #13 ENSSFOG00015025509 marchf4l (ENSSFOG00015007863) ENSSFOG00015025008 zgc:162707 (ENSSFOG00015031853) tmem41aa (ENSSFOG00015007825) igf2bp2b (ENSSFOG00015007770) TRA2B (ENSSFOG00015007738) zgc:112416 (ENSSFOG00015007698) ENSSFOG00015007680 atg9a (ENSSFOG00015007618) ANKZF1 (ENSSFOG00015007560) ENSSFOG00015007347 ENSSFOG00015027566 #21 sumo3a (ENSSFOG00015007119) #22 ube2g2 (ENSSFOG00015026166) #23 TSPEAR (ENSSFOG00015007048) ENSSFOG00015006907 BMPR2 (ENSSFOG00015006844) fam117bb (ENSSFOG00015032151) ICA1L (ENSSFOG00015030869) wdr12 (ENSSFOG00015006713) ENSSFOG00015027483 SUMO1 (ENSSFOG00015025642) FZD7 (ENSSFOG00015006669) ALS2 (ENSSFOG00015006570) MPP4 (ENSSFOG00015006525) TMEM237 (ENSSFOG00015006497) cyp20a1 (ENSSFOG00015006435) ABI2 (ENSSFOG00015006375) Clupeocephala ANCESTRAL SPECIES 433 ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00390000011514 ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v #22 Otomorpha ANCESTRAL SPECIES 24 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v #22 ENSGT00510000047718.d ENSGT00980000199010 ENSGT00940000164964.b ENSGT00940000156449.a ENSGT00950000183046.a.a.fb ENSGT00390000013916 ENSGT00940000158239.a.b ENSGT00940000158239.a.a.c ENSGT00940000155861.C.f ENSGT00940000156444.d ENSGT00390000005159.i ENSGT00940000156089.f ENSGT00940000156552.c.a ENSGT00530000063873.B ENSGT00940000159069 Otophysi ANCESTRAL SPECIES 133 ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00940000181146 ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v #22 ENSGT00510000047718.d ENSGT00950000183009.db.b ENSGT00940000154913 ENSGT00940000163412 ENSGT00940000157516 ENSGT00390000005923 ENSGT00940000160909.f.a ENSGT00390000015818 ENSGT00940000158361 ENSGT00390000017619 ENSGT00390000001856 ENSGT00940000160306.o.b ENSGT00940000161562 ENSGT00390000008812.a.a ENSGT00940000160299 Characiphysae ANCESTRAL SPECIES ENSGT00950000182895.a.b.v #22 Characiphysae_b ANCESTRAL SPECIES ENSGT00950000182895.a.b.v #22 Characoidei ANCESTRAL SPECIES ENSGT00950000182895.a.b.v #22 Mexicana tetra MODERN SPECIES 155 sumo3a (ENSAMXG00000037441) #22 ENSAMXG00000004837 coq7 (ENSAMXG00000004846) notum2 (ENSAMXG00000004857) ccr7 (ENSAMXG00000031087) cycsb (ENSAMXG00000041744) nfe2l2b (ENSAMXG00000035783) mtx2 (ENSAMXG00000004894) lnpk (ENSAMXG00000043426) atp5mc3b (ENSAMXG00000031866) chrna1 (ENSAMXG00000042936) ENSAMXG00000031617 ENSAMXG00000041604 GPR155 (ENSAMXG00000004910) ENSAMXG00000033114 ola1 (ENSAMXG00000004913) Cyprinoidei ANCESTRAL SPECIES 59 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.b ENSGT00390000013916.g.b ENSGT00950000183046.a.a.fb ENSGT00940000156449.a ENSGT00940000164964.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00940000181146 ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v #22 ENSGT00510000047718.d ENSGT00950000183009.db.b ENSGT00940000154913 ENSGT00940000163412 ENSGT00940000157516 ENSGT00390000005923 ENSGT00940000160909.f.a ENSGT00390000015818 ENSGT00940000158361 ENSGT00390000017619 ENSGT00390000001856 ENSGT00940000160306.o.b ENSGT00940000161562 ENSGT00390000008812.a.a ENSGT00940000160299 Cyprininae ANCESTRAL SPECIES 232 ENSGT00940000174369 ENSGT00940000156552.c.a.b ENSGT00940000156089.f.a ENSGT00940000156444.d.d ENSGT00940000155861.C.f.g ENSGT00860000133854 ENSGT00950000183046.a.a.fb.c.b ENSGT00940000156449.a.b ENSGT00940000161051.a.a.a.a.a.b ENSGT00940000154856.A.a.d.a ENSGT00950000182942.a.b.h ENSGT00390000005911.n ENSGT00950000182942.a.b.g.a ENSGT00940000164909.e.a.b ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v #22 ENSGT00510000047718.d.a ENSGT00950000183009.db.b.d ENSGT00940000154913.bb.a ENSGT00940000163412.d ENSGT00940000157516.b ENSGT00390000006618.m.a ENSGT00390000005923.fb ENSGT00940000160909.f.a.a ENSGT00390000015818.j ENSGT00940000158361.l ENSGT01000000221414 ENSGT00940000160306.o.b.b ENSGT00940000161562.c ENSGT00390000008812.a.a.c ENSGT00940000160299.c Goldfish DUPLICATION Goldfish MODERN SPECIES 50 mmd (ENSCARG00000033280) ENSCARG00000033330 ubn2b (ENSCARG00000033359) trir (ENSCARG00000033422) HOOK2 (ENSCARG00000033609) junbb (ENSCARG00000036449) rtbdn (ENSCARG00000036456) MAST1 (ENSCARG00000022935) ATG4D (ENSCARG00000024672) ENSCARG00000024696 SPHK1 (ENSCARG00000024706) cygb1 (ENSCARG00000024802) ENSCARG00000024815 GGA3 (ENSCARG00000024855) NUP85 (ENSCARG00000025341) ENSCARG00000025661 #22 jpt1b (ENSCARG00000025675) ENSCARG00000025689 ENSCARG00000025694 MCOLN1 (ENSCARG00000025717) ENSCARG00000026312 ENSCARG00000026320 ENSCARG00000026327 ENSCARG00000026335 ubn2b (ENSCARG00000026351) trir (ENSCARG00000026472) HOOK2 (ENSCARG00000026534) ENSCARG00000027035 junbb (ENSCARG00000027041) rtbdn (ENSCARG00000027047) ENSCARG00000027061 Goldfish MODERN SPECIES 46 ENSCARG00000021653 wdsub1 (ENSCARG00000021539) ENSCARG00000017322 FAM171B (ENSCARG00000017096) ENSCARG00000015756 GULP1 (ENSCARG00000015713) ENSCARG00000015670 ENSCARG00000015690 ENSCARG00000015660 ENSCARG00000015646 zgc:112416 (ENSCARG00000015634) pcnt (ENSCARG00000015475) ATG9A (ENSCARG00000015429) ENSCARG00000014750 pttg1ipa (ENSCARG00000014714) ENSCARG00000014705 #22 ENSCARG00000014633 coq7 (ENSCARG00000014608) notum2 (ENSCARG00000014585) ccr7 (ENSCARG00000014577) cycsb (ENSCARG00000014575) nfe2l2b (ENSCARG00000014572) mtx2 (ENSCARG00000014514) lnpk (ENSCARG00000014454) atp5mc3b (ENSCARG00000014409) chrna1 (ENSCARG00000013628) ENSCARG00000013590 OLA1 (ENSCARG00000013532) ENSCARG00000013514 ENSCARG00000013504 ENSCARG00000011675 Goldfish MODERN SPECIES 27 ENSCARG00000012833 ENSCARG00000012792 RAPH1 (ENSCARG00000011566) abi2a (ENSCARG00000011394) ENSCARG00000011365 ENSCARG00000011349 ALS2 (ENSCARG00000011069) fzd7a (ENSCARG00000011035) ENSCARG00000011004 fam117bb (ENSCARG00000010989) bmpr2b (ENSCARG00000010952) ENSCARG00000010940 ENSCARG00000010930 ENSCARG00000010914 ENSCARG00000010706 ENSCARG00000010617 #22 TSPEAR (ENSCARG00000010578) tra2b (ENSCARG00000010563) ENSCARG00000010554 igf2bp2a (ENSCARG00000008723) tmem41aa (ENSCARG00000008629) zgc:162707 (ENSCARG00000008624) nup35 (ENSCARG00000008446) znf804a (ENSCARG00000008433) ENSCARG00000008431 ENSCARG00000008429 zc3h15 (ENSCARG00000008382) itgav (ENSCARG00000007174) ENSCARG00000007040 umps (ENSCARG00000007022) cryba2b (ENSCARG00000007008) Goldfish DUPLICATION Goldfish MODERN SPECIES 49 tmem237a (ENSCARG00000058541) MPP4 (ENSCARG00000058403) ALS2 (ENSCARG00000058302) fzd7a (ENSCARG00000058275) CARF (ENSCARG00000058221) fam117bb (ENSCARG00000058201) bmpr2b (ENSCARG00000058042) ENSCARG00000057993 ENSCARG00000057935 ENSCARG00000057885 ENSCARG00000057849 ANKZF1 (ENSCARG00000057804) glb1l (ENSCARG00000056680) ENSCARG00000055613 ENSCARG00000055538 #21 ENSCARG00000055496 #22 TSPEAR (ENSCARG00000055474) tra2b (ENSCARG00000055456) igf2bp2a (ENSCARG00000051497) tmem41aa (ENSCARG00000051194) ehhadh (ENSCARG00000051156) zgc:162707 (ENSCARG00000051136) ENSCARG00000051108 med14 (ENSCARG00000050826) grtp1b (ENSCARG00000050799) lamp1b (ENSCARG00000050787) cd247l (ENSCARG00000050780) pou2f1b (ENSCARG00000050768) tmtc4 (ENSCARG00000050347) crygm2d13 (ENSCARG00000050297) ENSCARG00000050226 Goldfish MODERN SPECIES 24 ENSCARG00000026825 wdsub1 (ENSCARG00000029251) ENSCARG00000029455 MARCHF7 (ENSCARG00000035270) FAM171B (ENSCARG00000035290) zswim2 (ENSCARG00000035294) CALCRL (ENSCARG00000035311) GULP1 (ENSCARG00000035354) ENSCARG00000035363 ENSCARG00000005837 ENSCARG00000005853 pcnt (ENSCARG00000005921) atg9a (ENSCARG00000006247) ENSCARG00000006674 pttg1ipa (ENSCARG00000011323) ENSCARG00000011330 #22 ENSCARG00000011374 coq7 (ENSCARG00000011627) ccr7 (ENSCARG00000011694) cycsb (ENSCARG00000011705) nfe2l2b (ENSCARG00000011714) mtx2 (ENSCARG00000011733) lnpk (ENSCARG00000011769) atp5mc3b (ENSCARG00000011794) chrna1 (ENSCARG00000011844) ENSCARG00000012343 ENSCARG00000012348 GPR155 (ENSCARG00000012365) ENSCARG00000012479 SP3 (ENSCARG00000012556) ENSCARG00000012561 Cyprininae_a ANCESTRAL SPECIES 210 ENSGT00940000156552.c.a.b ENSGT00940000156089.f.a ENSGT00940000156444.d.d ENSGT00940000155861.C.f.g ENSGT00860000133854 ENSGT00950000183046.a.a.fb.c.b ENSGT00940000156449.a.b ENSGT00940000161051.a.a.a.a.a.b ENSGT00940000154856.A.a.d.a ENSGT00940000181146.a ENSGT00390000005911.n ENSGT00950000182942.a.b.g.a.b ENSGT00950000182942.a.b.g.a.a ENSGT00940000164909.e.a.b ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v #22 ENSGT00510000047718.d.a ENSGT00950000183009.db.b.d ENSGT00970000197261 ENSGT00940000154913.bb.a ENSGT00940000163412.d ENSGT00940000157516.b ENSGT00390000006618.m.a ENSGT00390000005923.fb ENSGT00940000160909.f.a.a ENSGT00390000015818.j ENSGT00940000158361.l ENSGT01000000221414 ENSGT00390000017619.a ENSGT00390000001856.f ENSGT00940000160306.o.b.a.a Golden-line barbel MODERN SPECIES 161 prkag3b (ENSSGRG00000035315) ENSSGRG00000035280 ENSSGRG00000035275 RAPH1 (ENSSGRG00000035192) abi2a (ENSSGRG00000034353) MPP4 (ENSSGRG00000034221) ALS2 (ENSSGRG00000034030) bmpr2b (ENSSGRG00000033981) ENSSGRG00000033621 ENSSGRG00000033455 ENSSGRG00000033449 ENSSGRG00000033447 glb1l (ENSSGRG00000033446) ENSSGRG00000033344 ENSSGRG00000033341 #21 ENSSGRG00000033279 #22 ENSSGRG00000033274 TSPEAR (ENSSGRG00000033267) tra2b (ENSSGRG00000033266) ENSSGRG00000033265 igf2bp2a (ENSSGRG00000033262) tmem41aa (ENSSGRG00000033261) ehhadh (ENSSGRG00000033260) zgc:162707 (ENSSGRG00000033258) nup35 (ENSSGRG00000033256) ENSSGRG00000033257 Common carp reference DUPLICATION Common carp reference MODERN SPECIES 10 ENSCCRG00000054143 glulb (ENSCCRG00000018622) pik3r6a (ENSCCRG00000033613) PIK3R6 (ENSCCRG00000033608) PIK3R5 (ENSCCRG00000033547) ENSCCRG00000073098 ntn1a (ENSCCRG00000080081) stx8 (ENSCCRG00000060142) ENSCCRG00000000387 cfap52 (ENSCCRG00000014221) ENSCCRG00000031121 grb2a (ENSCCRG00000076119) mif4gda (ENSCCRG00000069673) ENSCCRG00000015088 gga3a (ENSCCRG00000015157) ENSCCRG00000044215 #22 jpt1a (ENSCCRG00000082227) ENSCCRG00000069341 ENSCCRG00000060661 septin9b (ENSCCRG00000044759) ENSCCRG00000063208 rhbdl3 (ENSCCRG00000031119) znf207b (ENSCCRG00000022495) cd7al (ENSCCRG00000057203) rhot1b (ENSCCRG00000022542) tefm (ENSCCRG00000056201) atad5b (ENSCCRG00000022806) suz12b (ENSCCRG00000022847) utp6 (ENSCCRG00000023341) rab11fip4b (ENSCCRG00000068128) trim25 (ENSCCRG00000025552) Common carp reference MODERN SPECIES 41 ENSCCRG00000072640 ENSCCRG00000004178 abi2a (ENSCCRG00000003969) ENSCCRG00000004189 ENSCCRG00000029304 ENSCCRG00000073703 fam117bb (ENSCCRG00000078665) bmpr2b (ENSCCRG00000017905) ENSCCRG00000073722 ENSCCRG00000006872 ENSCCRG00000006883 ENSCCRG00000001290 glb1l (ENSCCRG00000007967) ENSCCRG00000005685 ENSCCRG00000075178 #21 ENSCCRG00000061289 #22 ENSCCRG00000005385 tra2b (ENSCCRG00000005399) igf2bp2a (ENSCCRG00000082615) tmem41aa (ENSCCRG00000043770) zgc:162707 (ENSCCRG00000011845) znf804a (ENSCCRG00000011836) ENSCCRG00000057926 zc3h15 (ENSCCRG00000054441) itgav (ENSCCRG00000031791) si:dkey-69o16.5 (ENSCCRG00000054890) umps (ENSCCRG00000000292) cryba2b (ENSCCRG00000078291) fev (ENSCCRG00000062040) cdk5r2b (ENSCCRG00000062556) wnt10a (ENSCCRG00000011897) Common carp reference MODERN SPECIES 16 wdsub1 (ENSCCRG00000025177) ENSCCRG00000026304 MARCHF7 (ENSCCRG00000022917) FAM171B (ENSCCRG00000022922) zswim2 (ENSCCRG00000022927) CALCRL (ENSCCRG00000005532) GULP1 (ENSCCRG00000027127) ENSCCRG00000076943 ENSCCRG00000008347 ENSCCRG00000016466 ENSCCRG00000000184 pcnt (ENSCCRG00000000384) atg9a (ENSCCRG00000000503) ENSCCRG00000040506 pttg1ipa (ENSCCRG00000013616) ENSCCRG00000013601 #22 ENSCCRG00000057193 coq7 (ENSCCRG00000071693) notum2 (ENSCCRG00000002035) ccr7 (ENSCCRG00000002028) cycsb (ENSCCRG00000060152) nfe2l2b (ENSCCRG00000002018) mtx2 (ENSCCRG00000062543) ENSCCRG00000067586 lnpk (ENSCCRG00000051273) chrna1 (ENSCCRG00000080784) ENSCCRG00000064998 GPR155 (ENSCCRG00000051004) ENSCCRG00000051001 ENSCCRG00000050997 ENSCCRG00000082658 Clupeiformes ANCESTRAL SPECIES 164 ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v #22 ENSGT00510000047718.d ENSGT00980000199010 ENSGT00940000156449.a ENSGT00950000183046.a.a.fb ENSGT00390000013916 ENSGT00940000158239.a.a.c ENSGT00940000155861.C.f ENSGT00940000156444.d ENSGT00390000005159.i ENSGT00940000156089.f ENSGT00940000156552.c.a ENSGT00940000174369 ENSGT00530000063873.B ENSGT00940000159069 ENSGT00950000183019.f.b.b.c Denticle herring MODERN SPECIES 19 ENSDCDG00000003126 ENSDCDG00000003111 ENSDCDG00000003090 ENSDCDG00000003048 ENSDCDG00000002973 ENSDCDG00000002913 ENSDCDG00000014771 ENSDCDG00000014768 ENSDCDG00000014763 ENSDCDG00000014757 ENSDCDG00000014690 ANKZF1 (ENSDCDG00000014662) ENSDCDG00000014295 ENSDCDG00000012767 ENSDCDG00000012725 #21 SUMO3 (ENSDCDG00000012626) #22 TSPEAR (ENSDCDG00000012600) ENSDCDG00000012586 bmpr2b (ENSDCDG00000007782) fam117bb (ENSDCDG00000007713) ENSDCDG00000007700 SUMO1 (ENSDCDG00000007696) FZD7 (ENSDCDG00000007689) ALS2 (ENSDCDG00000007638) MPP4 (ENSDCDG00000007623) tmem237a (ENSDCDG00000007617) abi2a (ENSDCDG00000007413) RAPH1 (ENSDCDG00000005222) ENSDCDG00000005185 ENSDCDG00000005183 FER1L6 (ENSDCDG00000005115) Atlantic herring DUPLICATION Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 18 myh9a (ENSCHAG00000022996) PLPPR2 (ENSCHAG00000022887) ENSCHAG00000017807 pik3r6a (ENSCHAG00000017633) PIK3R6 (ENSCHAG00000017618) PIK3R5 (ENSCHAG00000017547) ntn1a (ENSCHAG00000017484) stx8 (ENSCHAG00000017465) ENSCHAG00000017333 CFAP52 (ENSCHAG00000017251) ENSCHAG00000017154 MCHR1 (ENSCHAG00000017115) ENSCHAG00000017096 mif4gda (ENSCHAG00000017014) gga3a (ENSCHAG00000016825) ENSCHAG00000016782 #22 jpt1a (ENSCHAG00000016774) ENSCHAG00000016748 ENSCHAG00000016720 ENSCHAG00000016698 ENSCHAG00000016668 ENSCHAG00000016636 septin9b (ENSCHAG00000015484) ENSCHAG00000015241 ccdc40 (ENSCHAG00000015079) CARD14 (ENSCHAG00000014984) rhbdl3 (ENSCHAG00000014902) ccdc40 (ENSCHAG00000014775) ENSCHAG00000014755 ENSCHAG00000014742 CBX4 (ENSCHAG00000014731) Atlantic herring MODERN SPECIES 11 ENSCHAG00000000152 ENSCHAG00000000157 dcbld2 (ENSCHAG00000000176) tmem30c (ENSCHAG00000000211) cmss1 (ENSCHAG00000000225) ENSCHAG00000000249 DOP1B (ENSCHAG00000000353) ENSCHAG00000000492 ENSCHAG00000000546 ENSCHAG00000000691 ENSCHAG00000000999 LRRC8C (ENSCHAG00000001029) ENSCHAG00000001064 glb1l (ENSCHAG00000001493) ENSCHAG00000006037 #21 ENSCHAG00000006121 #22 ENSCHAG00000006214 ENSCHAG00000006298 ENSCHAG00000006458 ENSCHAG00000006503 ENSCHAG00000006737 ENSCHAG00000006867 ENSCHAG00000006899 ENSCHAG00000006919 ENSCHAG00000006948 ENSCHAG00000006956 ENSCHAG00000006999 ENSCHAG00000007036 ENSCHAG00000007070 ENSCHAG00000007105 spryd7b (ENSCHAG00000007123) Atlantic herring MODERN SPECIES 13 cdk5r2a (ENSCHAG00000002014) cryba2a (ENSCHAG00000001996) KALRN (ENSCHAG00000001610) ENSCHAG00000001528 CCDC14 (ENSCHAG00000001479) iqcb1 (ENSCHAG00000001386) TBX19 (ENSCHAG00000001271) ENSCHAG00000001250 ENSCHAG00000001233 trpc7a (ENSCHAG00000000797) ENSCHAG00000000561 ENSCHAG00000023977 atg9a (ENSCHAG00000023956) ENSCHAG00000023451 pttg1ipa (ENSCHAG00000023421) sumo3a (ENSCHAG00000023394) #22 ube2g2 (ENSCHAG00000023377) #23 TSPEAR (ENSCHAG00000023372) ENSCHAG00000023311 meig1 (ENSCHAG00000023306) tmem243b (ENSCHAG00000023300) dmtf1 (ENSCHAG00000023288) TSPAN9 (ENSCHAG00000023272) mical3b (ENSCHAG00000023196) svopl (ENSCHAG00000023176) parp12b (ENSCHAG00000023169) kics2 (ENSCHAG00000023165) srgap1b (ENSCHAG00000021290) avpr1ab (ENSCHAG00000020900) dennd6b (ENSCHAG00000020340) ankrd16 (ENSCHAG00000020318) Euteleosteomorpha DUPLICATION Euteleosteomorpha DUPLICATION Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.a #22 Protacanthopterygii ANCESTRAL SPECIES 27 ENSGT00980000198666 ENSGT00390000009178 ENSGT00940000172275 ENSGT00390000019377.b.e ENSGT00390000012496.a.c ENSGT00940000163999.a.c.b.b ENSGT00940000161095 ENSGT00940000163999.a.c.a.b ENSGT01090000260082.d.a.b.q.a ENSGT00940000155107.b.a ENSGT00940000155063.a.b ENSGT00440000033329.b.a.a.c ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.j.a #22 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00950000183009.db.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183052.b.c.b.a.e.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.a.a #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.a.a #22 Oncorhynchus ANCESTRAL SPECIES 70 ENSGT00390000012496.a.c.b.b.a ENSGT00940000164480.a.a.g.a.a.b ENSGT00390000009178.h ENSGT00940000163999.a.c.a.b.a.a.b ENSGT00940000163999.a.c.a.b.a.b.e.a ENSGT01090000260082.d.a.b.q.a.a ENSGT00940000155107.b.a.e ENSGT00940000155063.a.b.f ENSGT00440000033329.b.a.a.c.a ENSGT00390000014839.b.e ENSGT00940000164909.e.b.j ENSGT00950000182895.a.b.v.j.a.a #22 ENSGT00510000047718.c ENSGT00940000157267.a ENSGT00390000011514 ENSGT00940000155489.a.d ENSGT00950000183009.db.a.b.a ENSGT00940000155099.k.b.e.a ENSGT00390000000673.a.b.c ENSGT00940000163513.d ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.b ENSGT00390000004600.b.a.h ENSGT00950000183071.a.a.b.c.a.b.a ENSGT00940000166763.d.a ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b.d ENSGT00940000166078.c ENSGT00550000075086.d Oncorhynchus_a ANCESTRAL SPECIES 86 ENSGT00390000019377.b.e.d.a.b ENSGT00390000012496.a.c.b.b.a ENSGT00940000164480.a.a.g.a.a.b ENSGT00390000009178.h ENSGT00940000163999.a.c.a.b.a.a.b ENSGT00940000163999.a.c.a.b.a.b.e.a ENSGT00940000163999.a.c.a.b.a.b.f ENSGT01090000260082.d.a.b.q.a.a ENSGT00940000155107.b.a.e ENSGT00940000155063.a.b.f ENSGT00440000033329.b.a.a.c.a ENSGT00390000014839.b.f.b ENSGT00940000164909.e.b.i ENSGT00950000182895.a.b.v.j.a.a #22 ENSGT00510000047718.c ENSGT00940000157267.a ENSGT00390000011514 ENSGT00940000155489.a.c.a ENSGT00950000183009.db.a.b.a ENSGT00940000155099.k.b.e.a ENSGT00390000000673.a.b.c ENSGT00940000163513.d ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.b ENSGT00390000004600.b.a.h ENSGT00950000183071.a.a.b.c.a.b.a ENSGT00940000166763.d.a ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b.d ENSGT00940000166078.c.c ENSGT00550000075086.d Coho salmon MODERN SPECIES 7 ENSOKIG00005013239 ENSOKIG00005013258 tlr22 (ENSOKIG00005013441) ENSOKIG00005013447 ENSOKIG00005013454 ENSOKIG00005013460 ENSOKIG00005013465 ENSOKIG00005013499 ENSOKIG00005013915 ENSOKIG00005016118 ENSOKIG00005016124 ENSOKIG00005016200 ENSOKIG00005016937 ATG9A (ENSOKIG00005016974) ENSOKIG00005017083 SUMO3 (ENSOKIG00005017139) #22 TSPEAR (ENSOKIG00005017150) ENSOKIG00005017173 zgc:112416 (ENSOKIG00005017214) ENSOKIG00005017302 TRA2B (ENSOKIG00005017348) ENSOKIG00005017445 ENSOKIG00005017465 ENSOKIG00005017581 ENSOKIG00005017591 ENSOKIG00005017601 ENSOKIG00005017619 UGGT1 (ENSOKIG00005017654) hs6st1b (ENSOKIG00005017860) otomp (ENSOKIG00005017882) ENSOKIG00005017898 Salmo ANCESTRAL SPECIES 41 ENSGT00940000153931.b.b.f.a.a ENSGT00390000013817.c ENSGT00940000172275 ENSGT00390000019377.b.e.d.b ENSGT00390000012496.a.c.b ENSGT00940000164480.a.a.g.a.b ENSGT00980000198666 ENSGT00390000009178.g ENSGT01090000260082.d.a.b.q.a.b ENSGT00940000155107.b.a.f ENSGT00940000155063.a.b.c ENSGT00440000033329.b.a.a.c.b ENSGT00390000014839.b.f.a ENSGT00940000164909.e.b.k ENSGT00390000004977.d.b.f #21 ENSGT00950000182895.a.b.v.j.a.a #22 ENSGT00950000182895.a.a.a.b ##22 ENSGT00940000164904.a.g.b.a ENSGT00540000073890.q.a ENSGT01060000250127 ENSGT00940000157267.b ENSGT00940000155489.a.c.b ENSGT00950000183009.db.a.a.b ENSGT00940000155099.k.b.e.b.b ENSGT00390000000673.a.b.d ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.a.b ENSGT00940000156207.b.c.a.a.b.a ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.a ENSGT00390000004600.b.a.g ENSGT00950000183071.a.a.b.c.a.b ENSGT00940000166763.d River trout MODERN SPECIES 32 abcc4 (ENSSTUG00000047308) ENSSTUG00000047234 ENSSTUG00000047226 ENSSTUG00000047139 ENSSTUG00000047123 ENSSTUG00000047116 ENSSTUG00000047113 ENSSTUG00000046743 ENSSTUG00000046228 ENSSTUG00000046182 ENSSTUG00000045384 ENSSTUG00000045341 atg9a (ENSSTUG00000045300) ENSSTUG00000044215 ENSSTUG00000044174 #21 ENSSTUG00000044153 #22 ENSSTUG00000043758 ENSSTUG00000043721 TRA2B (ENSSTUG00000043611) ENSSTUG00000043590 ENSSTUG00000043388 ENSSTUG00000043365 ENSSTUG00000043355 ENSSTUG00000043340 ENSSTUG00000043329 uggt1 (ENSSTUG00000042640) HS6ST1 (ENSSTUG00000042476) otomp (ENSSTUG00000042353) ENSSTUG00000042317 acvr1l (ENSSTUG00000042270) d2hgdh (ENSSTUG00000042238) Salmoninae ANCESTRAL SPECIES 495 ENSGT00440000033329.b.a.a.c.b ENSGT00390000014839.b.f ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.j.a.b #22 ENSGT00510000047718.c ENSGT00940000157267.a ENSGT00390000011514 ENSGT00940000155489.a.d ENSGT00950000183009.db.a.a.a ENSGT00940000155099.k.b.e.b.a ENSGT00390000000673.a.b.c ENSGT00940000157267.b ENSGT00730000110871.a.a.a.b ENSGT00940000155489.a.c ENSGT00950000183009.db.a.a.b ENSGT00940000155099.k.b.e.b.b ENSGT00390000000673.a.b.d ENSGT00950000183052.b.c.b.a.e.a ENSGT00940000156207.b.c.a.a.b.a Huchen MODERN SPECIES 358 ENSHHUG00000010227 ENSHHUG00000010219 #21 ENSHHUG00000010007 #22 ENSHHUG00000009995 ENSHHUG00000009929 ENSHHUG00000009808 slc13a3 (ENSHHUG00000009750) mc3r (ENSHHUG00000009698) tcf15 (ENSHHUG00000009689) SRXN1 (ENSHHUG00000009684) scrt2 (ENSHHUG00000009674) slc52a3 (ENSHHUG00000009650) ENSHHUG00000009628 peds1 (ENSHHUG00000009605) cebpb (ENSHHUG00000009597) ptpn1 (ENSHHUG00000009570) KLHL12 (ENSHHUG00000009536) ENSHHUG00000009513 Salmoninae_a ANCESTRAL SPECIES 49 ENSGT00390000019377.b.e.c ENSGT00390000012496.a.c.b ENSGT00940000164480.a.a.g.a.a.b ENSGT00940000164480.a.a.g.a.a.a ENSGT00940000164246.C.d.b.b ENSGT00390000009178.g ENSGT01090000260082.d.a.b.q.a.b ENSGT00940000155107.b.a.f ENSGT00940000155063.a.b ENSGT00440000033329.b.a.a.c.b ENSGT00390000014839.b.f.a ENSGT00940000176997 ENSGT00390000014839.b.f.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.j.a.b #22 ENSGT00510000047718.c ENSGT00940000157267.a ENSGT00390000011514 ENSGT00730000110871.a.a.a.b ENSGT00940000155489.a.d ENSGT00950000183009.db.a.a.a ENSGT00940000155099.k.b.e.b.a ENSGT00390000000673.a.b.c ENSGT00940000163513.d ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.b ENSGT00390000004600.b.a.h ENSGT00950000183071.a.a.b.c.a.b ENSGT00940000166763.d ENSGT00940000166078.c ENSGT00550000075086.d Oncorhynchus ANCESTRAL SPECIES 49 ENSGT00390000019377.b.e.c ENSGT00390000019377.b.e.d.a.b ENSGT00390000012496.a.c.b.b.b ENSGT00940000164480.a.a.g.a.a.a ENSGT00940000164246.C.d.b.b ENSGT00980000198666 ENSGT00390000009178.g ENSGT01090000260082.d.a.b.q.a.b ENSGT00940000155107.b.a.f ENSGT00940000155063.a.b.e ENSGT00440000033329.b.a.a.c.b ENSGT00390000014839.b.f.a ENSGT00390000014839.b.f.b ENSGT00940000164909.e.b.i ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.j.a.b #22 ENSGT00940000157267.b ENSGT00730000110871.a.a.a.b ENSGT00940000155489.a.c.b ENSGT00950000183009.db.a.b.b ENSGT00940000155099.k.b.e.b.b ENSGT00390000000673.a.b.d ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.a.b ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.b ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.a ENSGT00390000004600.b.a.g ENSGT00950000183071.a.a.b.c.a.b.b ENSGT00940000166763.d.b ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b.c ENSGT00940000166078.d ENSGT00550000075086.c Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00390000013817.d ENSGT00940000158283 ENSGT00390000019377.b.e.c ENSGT00390000019377.b.e.d.a.a ENSGT00390000012496.a.c.b.b.b ENSGT00940000164480.a.a.g.b ENSGT00980000198666 ENSGT00390000009178.g ENSGT01090000260082.d.a.b.q.a.b ENSGT00940000155107.b.a.f ENSGT00940000155063.a.b.e ENSGT00440000033329.b.a.a.c.b ENSGT00390000014839.b.f.a ENSGT00940000176997 ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.j.a.b #22 ENSGT00940000157267.b ENSGT00730000110871.a.a.a.b ENSGT00940000155489.a.c.b ENSGT00950000183009.db.a.b.b ENSGT00940000155099.k.b.e.b.b ENSGT00390000000673.a.b.d ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.a ENSGT00390000004600.b.a.g ENSGT00950000183071.a.a.b.c.a.b.b ENSGT00940000166763.d.b ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b.c ENSGT00940000166078.d ENSGT00550000075086.c ENSGT00940000156569.a.b.a.e ENSGT00940000160480.c.b.c Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 5 ENSOTSG00005035925 abcc4 (ENSOTSG00005027263) abcc4 (ENSOTSG00005026793) timmdc1 (ENSOTSG00005026791) poglut1 (ENSOTSG00005026614) ENSOTSG00005026612 VANGL1 (ENSOTSG00005026610) ENSOTSG00005026609 ENSOTSG00005026608 ENSOTSG00005026607 tlr22 (ENSOTSG00005026606) ENSOTSG00005023952 ENSOTSG00005023916 ENSOTSG00005022693 ENSOTSG00005022691 ENSOTSG00005022655 #22 ENSOTSG00005022654 rassf6 (ENSOTSG00005022652) ENSOTSG00005022651 ENSOTSG00005022650 ENSOTSG00005022649 TRA2B (ENSOTSG00005022648) ENSOTSG00005022645 ENSOTSG00005022594 ENSOTSG00005022591 ENSOTSG00005022588 ENSOTSG00005022583 ENSOTSG00005022580 uggt1 (ENSOTSG00005022205) hs6st1b (ENSOTSG00005022195) otomp (ENSOTSG00005022194) Chinook salmon MODERN SPECIES 31 ENSOTSG00005007304 ENSOTSG00005007301 DBI (ENSOTSG00005007296) STEAP3 (ENSOTSG00005007293) ENSOTSG00005007292 scn1lab (ENSOTSG00005007291) ENSOTSG00005007290 ENSOTSG00005007288 ENSOTSG00005007287 B3GALT1 (ENSOTSG00005007286) ENSOTSG00005007254 ENSOTSG00005007248 ENSOTSG00005041199 ENSOTSG00005041197 ENSOTSG00005041196 #21 ENSOTSG00005041195 #22 ENSOTSG00005041194 pcnt (ENSOTSG00005041185) ENSOTSG00005041180 TRA2B (ENSOTSG00005041109) ENSOTSG00005041040 ENSOTSG00005041025 ENSOTSG00005041023 ENSOTSG00005041022 ENSOTSG00005041021 ENSOTSG00005041020 ENSOTSG00005041019 uggt1 (ENSOTSG00005040996) OXGR1 (ENSOTSG00005040994) ENSOTSG00005040993 dzip1 (ENSOTSG00005040992) Coho salmon MODERN SPECIES 25 ENSOKIG00005035989 POGLUT1 (ENSOKIG00005035758) ENSOKIG00005035436 VANGL1 (ENSOKIG00005035379) ENSOKIG00005035364 ENSOKIG00005035334 ENSOKIG00005034452 ENSOKIG00005033685 ENSOKIG00005033595 ENSOKIG00005031728 ENSOKIG00005031604 atg9a (ENSOKIG00005031492) ENSOKIG00005031464 ENSOKIG00005031163 ENSOKIG00005031101 #21 ENSOKIG00005031012 #22 ENSOKIG00005030481 ENSOKIG00005030068 TRA2B (ENSOKIG00005029943) ENSOKIG00005029825 ENSOKIG00005029647 ENSOKIG00005029627 ENSOKIG00005029607 ENSOKIG00005029596 ENSOKIG00005029574 uggt1 (ENSOKIG00005029368) HS6ST1 (ENSOKIG00005029331) otomp (ENSOKIG00005029296) ENSOKIG00005029264 acvr1l (ENSOKIG00005029179) d2hgdh (ENSOKIG00005029136) Salmo ANCESTRAL SPECIES 48 ENSGT00390000013817.d ENSGT00940000158283 ENSGT00390000019377.b.e.c ENSGT00390000012496.a.c.a.a ENSGT00940000164246.C.d.b.a ENSGT00390000009178.h ENSGT00940000163999.a.c.a.b.a.a.b ENSGT00940000163999.a.c.a.b.a.a.a ENSGT00940000163999.a.c.a.b.a.b ENSGT01090000260082.d.a.b.q.a.a ENSGT00940000155063.a.b.d ENSGT00440000033329.b.a.a.c.a ENSGT00390000014839.b.f.b.a ENSGT00940000164909.e.b.l ENSGT00390000004977.d.b.e #21 ENSGT00950000182895.a.b.v.j.a.b #22 ENSGT00510000047718.c ENSGT00940000157267.a ENSGT00390000011514 ENSGT00730000110871.a.a.a.b ENSGT00940000155489.a.d ENSGT00950000183009.db.a.a.a ENSGT00940000155099.k.b.e.b.a ENSGT00390000000673.a.b.c ENSGT00940000163513.d ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.b ENSGT00390000004600.b.a.h ENSGT00950000183071.a.a.b.c.a.a ENSGT00940000166763.c ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b.a ENSGT00550000075086.d River trout MODERN SPECIES 36 poglut1 (ENSSTUG00000049946) ENSSTUG00000049952 VANGL1 (ENSSTUG00000049968) ENSSTUG00000049972 ENSSTUG00000049974 ENSSTUG00000049977 tlr22 (ENSSTUG00000049980) tlr22 (ENSSTUG00000049983) tlr22 (ENSSTUG00000049985) ENSSTUG00000049993 ENSSTUG00000050054 ENSSTUG00000050230 atg9a (ENSSTUG00000050237) ENSSTUG00000050258 ENSSTUG00000050304 #21 ENSSTUG00000050311 #22 TSPEAR (ENSSTUG00000050325) ENSSTUG00000050347 zgc:112416 (ENSSTUG00000050353) ENSSTUG00000050361 TRA2B (ENSSTUG00000050364) ENSSTUG00000050370 ENSSTUG00000050379 ENSSTUG00000050390 ENSSTUG00000050394 ENSSTUG00000050395 uggt1 (ENSSTUG00000050440) HS6ST1 (ENSSTUG00000050637) otomp (ENSSTUG00000050639) ENSSTUG00000050641 acvr1l (ENSSTUG00000050643) Acanthomorphata ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.a #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.a #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.a #22 Tiger tail seahorse MODERN SPECIES 40 dhrs12 (ENSHCOG00000001796) ENSHCOG00000001804 lcp1 (ENSHCOG00000001817) cnot11 (ENSHCOG00000001826) ENSHCOG00000001864 tmem237a (ENSHCOG00000001896) ENSHCOG00000001920 klf7b (ENSHCOG00000001940) ENSHCOG00000001962 ccnyl1 (ENSHCOG00000001975) PLEKHM3 (ENSHCOG00000001992) DNAJC15 (ENSHCOG00000002001) ENSHCOG00000002008 ENSHCOG00000002029 ENSHCOG00000002045 #21 ENSHCOG00000002049 #22 FMNL2 (ENSHCOG00000002065) ENSHCOG00000002075 prpf40a (ENSHCOG00000002091) rprma (ENSHCOG00000002099) ENSHCOG00000002108 GALNT13 (ENSHCOG00000002117) KCNJ3 (ENSHCOG00000002127) ENSHCOG00000002132 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.a #22 Percomorphaceae_C ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.a #22 Eupercaria ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.a #22 Eupecaria_A ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.a #22 Eupecaria_B ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.a #22 Perciformes ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.a #22 Cottioidei ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.a #22 Stickleback MODERN SPECIES 16 xrcc5 (ENSGACG00000006130) COL6A2 (ENSGACG00000006089) #12 MARCHF4 (ENSGACG00000006082) SMARCAL1 (ENSGACG00000006073) nme9 (ENSGACG00000006066) zgc:162707 (ENSGACG00000006064) ehhadh (ENSGACG00000006057) tmem41aa (ENSGACG00000006043) igf2bp2a (ENSGACG00000005991) tra2b (ENSGACG00000005986) ENSGACG00000005978 ENSGACG00000005972 glb1l (ENSGACG00000005954) ENSGACG00000005949 ENSGACG00000005937 #21 ENSGACG00000005931 #22 FMNL2 (ENSGACG00000005914) prpf40a (ENSGACG00000005886) rprmb (ENSGACG00000005884) GALNT13 (ENSGACG00000005860) KCNJ3 (ENSGACG00000005851) nr4a2a (ENSGACG00000005831) ENSGACG00000005829 CYTIP (ENSGACG00000005824) ACVR1C (ENSGACG00000005819) ENSGACG00000005810 upp2 (ENSGACG00000005800) CCDC148 (ENSGACG00000005787) PKP4 (ENSGACG00000005780) dap1b (ENSGACG00000005778) TANC1 (ENSGACG00000005757) Cod MODERN SPECIES 18 tnfsf10 (ENSGMOG00000024676) MSL2 (ENSGMOG00000012945) ENSGMOG00000012930 STAG1 (ENSGMOG00000012908) ENSGMOG00000032856 ENSGMOG00000012899 ENSGMOG00000012865 ENSGMOG00000012859 ENSGMOG00000012852 ENSGMOG00000012840 ENSGMOG00000012833 ENSGMOG00000010836 atg9a (ENSGMOG00000010871) ENSGMOG00000010893 ENSGMOG00000011026 #21 ENSGMOG00000011034 #22 ENSGMOG00000011040 ENSGMOG00000011053 fabp7a (ENSGMOG00000011090) fyna (ENSGMOG00000011103) marcksb (ENSGMOG00000033838) col10a1a (ENSGMOG00000011116) ENSGMOG00000011122 fhl5 (ENSGMOG00000011143) fut9a (ENSGMOG00000020540) manea (ENSGMOG00000011151) ENSGMOG00000011160 ENSGMOG00000011170 ENSGMOG00000011190 ENSGMOG00000011193 ENSGMOG00000033171 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.b #22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.b #22 Salmoninae ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.b #22 Huchen MODERN SPECIES 4428 ENSHHUG00000044530 ENSHHUG00000044536 ENSHHUG00000044539 ENSHHUG00000044561 #21 ENSHHUG00000044568 #22 TSPEAR (ENSHHUG00000044631) ENSHHUG00000044638 zgc:112416 (ENSHHUG00000044669) Salmoninae_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.b #22 Salmo ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.b #22 Atlantic salmon MODERN SPECIES 7 ENSSSAG00000114461 ENSSSAG00000066492 ENSSSAG00000066499 ENSSSAG00000066645 ENSSSAG00000017255 ENSSSAG00000094502 ENSSSAG00000066641 ENSSSAG00000088381 ENSSSAG00000066649 ENSSSAG00000066692 ENSSSAG00000067494 ENSSSAG00000114816 ENSSSAG00000078382 ENSSSAG00000078456 ENSSSAG00000111098 #21 ENSSSAG00000078591 #22 ENSSSAG00000078597 ENSSSAG00000078620 ENSSSAG00000078698 ENSSSAG00000072765 ENSSSAG00000083359 ENSSSAG00000078718 ENSSSAG00000078759 ENSSSAG00000078778 ENSSSAG00000078811 ENSSSAG00000092203 ENSSSAG00000116422 ENSSSAG00000078840 ENSSSAG00000079371 acvr1l (ENSSSAG00000079396) otomp (ENSSSAG00000103893) Acanthomorphata ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.b #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.b #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.j.b #22 Tiger tail seahorse MODERN SPECIES 204 golga5 (ENSHCOG00000019607) trip11 (ENSHCOG00000019787) fbln5 (ENSHCOG00000019807) TC2N (ENSHCOG00000019824) hs6st1b (ENSHCOG00000019856) uggt1 (ENSHCOG00000020008) ENSHCOG00000020037 ola1 (ENSHCOG00000020085) TRA2B (ENSHCOG00000020095) ENSHCOG00000020103 pcnt (ENSHCOG00000020359) atg9a (ENSHCOG00000020389) ENSHCOG00000020410 ENSHCOG00000020525 ENSHCOG00000020544 #21 ENSHCOG00000020554 #22 UTP14C (ENSHCOG00000020563) TSPEAR (ENSHCOG00000020571) ENSHCOG00000020587 fabp7a (ENSHCOG00000020590) ENSHCOG00000020600 fyna (ENSHCOG00000020626) marcksb (ENSHCOG00000020632) col10a1a (ENSHCOG00000020633) fhl5 (ENSHCOG00000020655) fut9a (ENSHCOG00000020673) manea (ENSHCOG00000020684) ENSHCOG00000020697 ppp1cb (ENSHCOG00000020713) ENSHCOG00000020726 ypel5 (ENSHCOG00000020737) Euteleosteomorpha ANCESTRAL SPECIES 377 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 Protacanthopterygii ANCESTRAL SPECIES 27 ENSGT00390000009178 ENSGT00940000172275 ENSGT00390000019377.b.e ENSGT00390000012496.a.c ENSGT00940000163999.a.c.b.b ENSGT00940000161095 ENSGT00940000163999.a.c.a.b ENSGT01090000260082.d.a.b.q.a ENSGT00940000155107.b.a ENSGT00940000155063.a.b ENSGT00440000033329.b.a.a.c ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.j.a #22 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00950000183009.db.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183052.b.c.b.a.e.a Northern pike MODERN SPECIES 21 SSBP4 (ENSELUG00000008998) ENSELUG00000009064 ENSELUG00000009037 poglut1 (ENSELUG00000009087) ENSELUG00000009144 VANGL1 (ENSELUG00000009195) ENSELUG00000009208 ENSELUG00000009243 tlr22 (ENSELUG00000009256) ENSELUG00000009290 ENSELUG00000009319 MAP4K4 (ENSELUG00000009520) ENSELUG00000009573 atg9a (ENSELUG00000009602) ENSELUG00000009709 #21 ENSELUG00000001518 #22 TSPEAR (ENSELUG00000009812) ENSELUG00000009935 ENSELUG00000009974 ENSELUG00000010433 ENSELUG00000030506 TRA2B (ENSELUG00000010477) ENSELUG00000010520 ola1 (ENSELUG00000010548) ENSELUG00000010566 phospho2 (ENSELUG00000010608) SYAP1 (ENSELUG00000010637) txlng (ENSELUG00000010672) rbb4l (ENSELUG00000010738) ENSELUG00000026064 ZRSR2 (ENSELUG00000010776) Salmoninae ANCESTRAL SPECIES ENSGT00500000044930.e.b.b ENSGT00940000158812.j.b.a ENSGT00940000157651 ENSGT00530000063647.A.a ENSGT00940000153095.c.b ENSGT00390000006348 ENSGT00390000017606.a.b.h ENSGT00990000204633 ENSGT00390000017606.a.b.g ENSGT00940000164352.b.r ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333.b.a ENSGT00390000000204 ENSGT00950000182895.a.b.v.k #22 ENSGT00950000182895.b.b.h ##22 ENSGT00940000164904.b ENSGT01030000235004 ENSGT00940000157195.m ENSGT00940000157598.p ENSGT00940000157598.o.a ENSGT01030000235061 ENSGT00390000013973.B.g.a.a ENSGT00390000005481.s ENSGT00940000155641.g.a ENSGT00940000156498.g.a.d ENSGT00940000153469.a.a.k ENSGT00940000156051.c.a ENSGT01050000244879.a.b.e ENSGT00940000154396.b.a.a.a Huchen DUPLICATION Huchen MODERN SPECIES 7196 ENSHHUG00000015463 ENSHHUG00000015451 #22 Huchen MODERN SPECIES 1861 noxo1a (ENSHHUG00000007962) tbl3 (ENSHHUG00000007973) rps2 (ENSHHUG00000008107) ndufb10 (ENSHHUG00000008183) RPL3L (ENSHHUG00000008253) ENSHHUG00000008479 slc25a19 (ENSHHUG00000008498) MIF4GD (ENSHHUG00000008507) mrps7 (ENSHHUG00000008527) GGA3 (ENSHHUG00000008598) NUP85 (ENSHHUG00000009307) ENSHHUG00000009420 #22 ENSHHUG00000009432 ENSHHUG00000009448 ftr67 (ENSHHUG00000009462) Salmoninae_a ANCESTRAL SPECIES 52 ENSGT00940000153432.A.a.o.b ENSGT00390000014620.w.b ENSGT00940000157333.b.a ENSGT00390000000204 ENSGT00950000182895.a.b.v.k #22 ENSGT00940000164904.b ENSGT01030000235004 ENSGT00940000157195.m ENSGT00940000157598.p ENSGT00940000157598.o.a ENSGT01030000235061 ENSGT00390000013973.B.g.a.b ENSGT00390000005481.s ENSGT00940000155641.g.a ENSGT00940000156498.g.a.d ENSGT00940000153469.a.a.k ENSGT00940000156051.c.a ENSGT01050000244879.a.b.e ENSGT00940000154396.b.a.a.a.g.b.a ENSGT00940000155603.B Oncorhynchus DUPLICATION Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 44 ENSGT00940000158812.j.b.a ENSGT00940000157651.h ENSGT00940000157651.g.a ENSGT00530000063647.A.a ENSGT00940000153095.c.b ENSGT00390000006348 ENSGT00990000204633.a.a.a.a ENSGT00390000017606.a.b.h ENSGT00990000204633.a.a.a.b ENSGT00940000164352.b.r ENSGT00550000074902.p.b ENSGT00940000153432.A.a.o.b ENSGT00390000014620.w.b ENSGT00940000157333.b.a ENSGT00390000000204.q ENSGT00950000182895.a.b.v.k.c.a #22 ENSGT00940000164904.b ENSGT00990000213620 ENSGT01030000235004 ENSGT00940000157195.m.h ENSGT00940000157598.p ENSGT01030000235061 ENSGT00390000013973.B.g.a.b ENSGT00390000005481.s ENSGT00940000155641.g.a ENSGT00940000156498.g.a.d ENSGT00940000153469.a.a.k ENSGT00940000156051.c.a.e ENSGT01050000244879.a.b.e.k ENSGT00940000154396.b.a.a.a.g.b.a ENSGT00940000154396.b.a.a.a.g.b.b.a Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 3 noxo1a (ENSOMYG00000019561) ENSOMYG00000071972 tbl3 (ENSOMYG00000059941) ENSOMYG00000020018 RPS2 (ENSOMYG00000022358) nduba (ENSOMYG00000032689) ENSOMYG00000020073 RPL3L (ENSOMYG00000032714) ENSOMYG00000049384 SLC25A19 (ENSOMYG00000056213) MIF4GD (ENSOMYG00000072304) MRPS7 (ENSOMYG00000020138) GGA3 (ENSOMYG00000032939) NUP85 (ENSOMYG00000032032) jpt1b (ENSOMYG00000067278) sumo2 (ENSOMYG00000032420) #22 ENSOMYG00000055068 ENSOMYG00000017402 ENSOMYG00000034358 ENSOMYG00000063785 ENSOMYG00000061841 ENSOMYG00000051186 ENSOMYG00000077393 ENSOMYG00000054240 ENSOMYG00000011832 MOSMO (ENSOMYG00000011740) ENSOMYG00000050735 SDR42E2 (ENSOMYG00000058631) ENSOMYG00000011720 mfsd13al (ENSOMYG00000011712) kdelr2a (ENSOMYG00000011703) Rainbow trout MODERN SPECIES 4 drc3 (ENSOMYG00000019493) GID4 (ENSOMYG00000035001) noxo1a (ENSOMYG00000064359) tbl3 (ENSOMYG00000019722) ENSOMYG00000032632 RPS2 (ENSOMYG00000011211) nduba (ENSOMYG00000019620) RPL3L (ENSOMYG00000020051) ENSOMYG00000032725 ENSOMYG00000020101 SLC25A19 (ENSOMYG00000020121) MIF4GD (ENSOMYG00000032733) MRPS7 (ENSOMYG00000032763) ENSOMYG00000031890 NUP85 (ENSOMYG00000033670) sumo2 (ENSOMYG00000034243) #22 jpt1b (ENSOMYG00000032596) ENSOMYG00000034384 ENSOMYG00000046057 ENSOMYG00000025310 ENSOMYG00000034436 zgc:153240 (ENSOMYG00000034444) rhot1a (ENSOMYG00000034480) ENSOMYG00000034542 ENSOMYG00000034616 ENSOMYG00000034657 rfx1a (ENSOMYG00000034707) rln3a (ENSOMYG00000034796) ENSOMYG00000034824 ENSOMYG00000034914 ENSOMYG00000034947 Oncorhynchus_a ANCESTRAL SPECIES 434 ENSGT00940000157333.b.a ENSGT00390000000204.q ENSGT00950000182895.a.b.v.k.c.a #22 Coho salmon MODERN SPECIES 35 drc3 (ENSOKIG00005042724) GID4 (ENSOKIG00005042695) noxo1a (ENSOKIG00005042666) tbl3 (ENSOKIG00005040683) RNF151 (ENSOKIG00005040458) rps2 (ENSOKIG00005040373) ndufb10 (ENSOKIG00005040303) ENSOKIG00005040262 RPL3L (ENSOKIG00005040174) ENSOKIG00005040148 slc25a19 (ENSOKIG00005040130) mif4gda (ENSOKIG00005040099) mrps7 (ENSOKIG00005040051) GGA3 (ENSOKIG00005048124) NUP85 (ENSOKIG00005047755) ENSOKIG00005047662 #22 ENSOKIG00005047640 ENSOKIG00005047626 SEPTIN9 (ENSOKIG00005047513) ENSOKIG00005047483 ENSOKIG00005047474 ENSOKIG00005047464 TOM1L2 (ENSOKIG00005047460) srebf1 (ENSOKIG00005046541) ENSOKIG00005046462 nptx2a (ENSOKIG00005046452) bri3 (ENSOKIG00005046449) TECPR1 (ENSOKIG00005046406) lmtk2 (ENSOKIG00005046371) pvalb5 (ENSOKIG00005046360) pvalb1 (ENSOKIG00005046351) Oncorhynchus ANCESTRAL SPECIES 231 ENSGT00940000153432.A.a.p ENSGT00390000014620.x ENSGT00940000157333.b.b ENSGT00390000000204.r ENSGT00950000182895.a.b.v.k.c.b #22 Oncorhynchus_a ANCESTRAL SPECIES 355 ENSGT00390000000204.r ENSGT00950000182895.a.b.v.k.c.b #22 ENSGT00940000164904.b ENSGT01030000235004 ENSGT00940000157195.m.h Coho salmon MODERN SPECIES 269 GID4 (ENSOKIG00005042324) noxo1a (ENSOKIG00005042368) tbl3 (ENSOKIG00005042454) ENSOKIG00005043734 RNF151 (ENSOKIG00005043743) RPS2 (ENSOKIG00005043761) ENSOKIG00005043806 RPL3L (ENSOKIG00005043876) ENSOKIG00005043920 ENSOKIG00005043944 SLC25A19 (ENSOKIG00005043967) ENSOKIG00005043988 ENSOKIG00005044023 #22 ENSOKIG00005044128 ENSOKIG00005044153 Oncorhynchus ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.k.d #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.k.d #22 Chinook salmon MODERN SPECIES 22 ENSOTSG00005001447 ENSOTSG00005001448 ENSOTSG00005001450 ENSOTSG00005001453 zgc:172295 (ENSOTSG00005001460) ENSOTSG00005001463 serpine3 (ENSOTSG00005001464) nup35 (ENSOTSG00005001467) ENSOTSG00005001469 fgf16 (ENSOTSG00005001473) fgf16 (ENSOTSG00005001475) ENSOTSG00005001476 mnx2a (ENSOTSG00005001478) ENSOTSG00005001481 ENSOTSG00005001483 ENSOTSG00005001489 #22 xrcc5 (ENSOTSG00005001555) Salmo ANCESTRAL SPECIES 161 ENSGT00940000159298.b ENSGT00500000044930.e.b.b ENSGT01100000263547.a.b.b.a.a.a.b.b ENSGT00940000158812.j.b.a.a ENSGT00940000157651.e ENSGT00940000153095.c.a ENSGT00390000006348.v ENSGT00990000204633.b ENSGT00390000017606.a.b.h ENSGT00940000164352.b.r.b ENSGT00550000074902.r ENSGT00940000153432.A.a.o.a ENSGT00390000014620.w.a ENSGT00940000157333.b.a.b ENSGT00390000000204.o ENSGT00950000182895.a.b.v.k #22 Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 23 senp3a (ENSSSAG00000054757) eif4a1b (ENSSSAG00000054709) sox19a (ENSSSAG00000054754) ENSSSAG00000109134 tm4sf21a (ENSSSAG00000054686) slc25a15b (ENSSSAG00000054680) RT31 (ENSSSAG00000054675) FOXO1 (ENSSSAG00000054669) ENSSSAG00000054662 ENSSSAG00000091608 usf1l (ENSSSAG00000054626) ENSSSAG00000090337 ENSSSAG00000095992 bco2b (ENSSSAG00000054162) ENSSSAG00000054131 ENSSSAG00000105818 #22 ENSSSAG00000054109 ENSSSAG00000054054 ENSSSAG00000082517 zgc:158412 (ENSSSAG00000054047) atf5a (ENSSSAG00000054038) ENSSSAG00000053993 arcn1a (ENSSSAG00000053935) hmbsa (ENSSSAG00000053897) c2cd2l (ENSSSAG00000053874) dpagt1 (ENSSSAG00000053857) hinfp (ENSSSAG00000053572) ENSSSAG00000107243 nherf4b (ENSSSAG00000046619) atp5l (ENSSSAG00000046603) ift22 (ENSSSAG00000046594) Atlantic salmon MODERN SPECIES 22 TOM1L2 (ENSSSAG00000099383) drc3 (ENSSSAG00000002514) noxo1a (ENSSSAG00000096517) tbl3 (ENSSSAG00000099710) ENSSSAG00000004268 ENSSSAG00000004292 NDUFB10 (ENSSSAG00000084668) rpl3l (ENSSSAG00000001684) ENSSSAG00000004459 ENSSSAG00000104494 SLC25A19 (ENSSSAG00000092872) MIF4GD (ENSSSAG00000086423) RT07 (ENSSSAG00000117307) GGA3 (ENSSSAG00000113978) NUP85 (ENSSSAG00000001381) SUMO2 (ENSSSAG00000005757) #22 ENSSSAG00000084392 ENSSSAG00000108256 ENSSSAG00000082746 ENSSSAG00000001037 ENSSSAG00000118062 ENSSSAG00000000948 ENSSSAG00000000943 zgc:153240 (ENSSSAG00000000925) ENSSSAG00000088970 rhot1a (ENSSSAG00000046570) ENSSSAG00000042346 ENSSSAG00000042368 ENSSSAG00000042417 rfx1 (ENSSSAG00000042502) ENSSSAG00000115094 Atlantic salmon MODERN SPECIES 2 ENSSSAG00000120691 ENSSSAG00000041629 ENSSSAG00000040195 ENSSSAG00000106260 ENSSSAG00000040133 ENSSSAG00000083596 ppp6c (ENSSSAG00000040088) SCAI (ENSSSAG00000119979) ARP5L (ENSSSAG00000039245) ENSSSAG00000071079 ENSSSAG00000081878 ENSSSAG00000088101 ENSSSAG00000089403 ENSSSAG00000071098 ENSSSAG00000071115 ENSSSAG00000094554 #22 ENSSSAG00000098254 ENSSSAG00000102591 ENSSSAG00000086537 ENSSSAG00000004178 ENSSSAG00000004200 ENSSSAG00000004245 ENSSSAG00000004269 ENSSSAG00000096678 ENSSSAG00000004379 ENSSSAG00000004840 ENSSSAG00000112659 ENSSSAG00000114426 ppiab (ENSSSAG00000006931) ENSSSAG00000006939 OGDH (ENSSSAG00000007455) Acanthomorphata ANCESTRAL SPECIES 63 ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b ENSGT00530000063883 ENSGT00940000154800.k.a ENSGT00950000182836.a Cod MODERN SPECIES 12 bbs5 (ENSGMOG00000002910) ENSGMOG00000002940 ENSGMOG00000003008 zgc:172182 (ENSGMOG00000003120) lrp2a (ENSGMOG00000003139) rdh1 (ENSGMOG00000027878) ENSGMOG00000003318 ENSGMOG00000034141 ENSGMOG00000019323 ENSGMOG00000019314 ENSGMOG00000025683 ENSGMOG00000019299 glb1l (ENSGMOG00000019292) ENSGMOG00000019287 ENSGMOG00000019283 ENSGMOG00000019278 #22 FMNL2 (ENSGMOG00000019257) prpf40a (ENSGMOG00000019237) RPRM (ENSGMOG00000020310) GALNT13 (ENSGMOG00000019228) KCNJ3 (ENSGMOG00000019224) ENSGMOG00000024637 nr4a2a (ENSGMOG00000019215) GALNT5 (ENSGMOG00000035612) ACVR1C (ENSGMOG00000019193) ENSGMOG00000019186 UPP2 (ENSGMOG00000019169) CCDC148 (ENSGMOG00000019161) PKP4 (ENSGMOG00000027464) ENSGMOG00000010353 TANC1 (ENSGMOG00000023034) Euacanthomorphacea ANCESTRAL SPECIES 11 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 ENSGT00940000154800.k.a ENSGT00950000182836.a Percomorphaceae ANCESTRAL SPECIES 13 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a ENSGT00390000009189 Percomorphaceae_B ANCESTRAL SPECIES 11 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00990000204856 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a Ovalentaria ANCESTRAL SPECIES 10 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00990000204856 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 Atherinomorphae ANCESTRAL SPECIES 13 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00940000159241.r ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A ENSGT00940000155773.b Oryzias ANCESTRAL SPECIES 3 ENSGT00950000183049.C.a.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.e.b ENSGT00940000155095.i.a.e.a ENSGT00940000155095.i.a.f ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 ENSGT00940000154800.k.a Oryzias_a ANCESTRAL SPECIES 11 ENSGT00950000183049.C.a.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.e.b ENSGT00940000155095.i.a.e.a ENSGT00940000155095.i.a.f ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 ENSGT00940000154800.k.a Chinese medaka MODERN SPECIES 21 crlf1a (ENSOSIG00000004712) keap1a (ENSOSIG00000004741) ENSOSIG00000004828 ELL (ENSOSIG00000006770) d2hgdh (ENSOSIG00000006775) acvr1l (ENSOSIG00000006777) otomp (ENSOSIG00000006781) hs6st1b (ENSOSIG00000006785) uggt1 (ENSOSIG00000006789) ola1 (ENSOSIG00000006873) ENSOSIG00000006892 ENSOSIG00000006900 atg9a (ENSOSIG00000006904) ENSOSIG00000006912 ENSOSIG00000007230 #21 sumo3a (ENSOSIG00000007235) #22 TSPEAR (ENSOSIG00000007399) ENSOSIG00000007401 fabp7a (ENSOSIG00000007402) ENSOSIG00000007407 fyna (ENSOSIG00000007417) marcksb (ENSOSIG00000008935) col10a1a (ENSOSIG00000008936) fhl5 (ENSOSIG00000008938) FUT9 (ENSOSIG00000008942) FUT9 (ENSOSIG00000008944) fut9a (ENSOSIG00000008945) manea (ENSOSIG00000008947) ppp1cb (ENSOSIG00000008961) ENSOSIG00000010978 ypel5 (ENSOSIG00000010979) Japanese Medaka HdrR MODERN SPECIES 14 d2hgdh (ENSORLG00000013844) otomp (ENSORLG00000013815) acvr1l (ENSORLG00000013834) ENSORLG00000027515 hs6st1b (ENSORLG00000013805) uggt1 (ENSORLG00000013749) ENSORLG00000013706 ola1 (ENSORLG00000013788) ENSORLG00000013780 ENSORLG00000013689 pcnt (ENSORLG00000013666) atg9a (ENSORLG00000013642) ENSORLG00000027840 ENSORLG00000013589 ENSORLG00000028257 #21 sumo3a (ENSORLG00000013523) #22 ENSORLG00000013516 ENSORLG00000013504 fabp7a (ENSORLG00000013475) ENSORLG00000013462 fyna (ENSORLG00000013453) marcksb (ENSORLG00000013439) col10a1a (ENSORLG00000013436) fhl5 (ENSORLG00000013430) fut9c (ENSORLG00000013390) fut9b (ENSORLG00000013385) fut9a (ENSORLG00000013380) manea (ENSORLG00000013371) ppp1cb (ENSORLG00000013357) ENSORLG00000013346 ypel5 (ENSORLG00000013343) Cyprinodontiformes ANCESTRAL SPECIES 15 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00940000159241.r ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT01030000235131 ENSGT00940000161094 ENSGT00940000153988.A ENSGT00940000155773.b Aplocheiloidei ANCESTRAL SPECIES 15 ENSGT00950000183049.C.a.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.f.b ENSGT00940000155095.i.a.f.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a ENSGT00390000009189 Turquoise killifish DUPLICATION Turquoise killifish MODERN SPECIES 1623 COL6A2 (ENSNFUG00015024962) #12 DNAL1 (ENSNFUG00015024954) MARCH4 (ENSNFUG00015024950) SMARCAL1 (ENSNFUG00015024913) nme9 (ENSNFUG00015024888) zgc:162707 (ENSNFUG00015024880) ehhadh (ENSNFUG00015024876) TMEM41AA (ENSNFUG00015024872) IGF2BP2A (ENSNFUG00015024804) tra2b (ENSNFUG00015024781) ENSNFUG00015024694 ENSNFUG00015024684 ANKZF1 (ENSNFUG00015024679) ENSNFUG00015024604 ENSNFUG00015024585 #21 ENSNFUG00015024578 #22 ENSNFUG00015024573 FMNL2A (ENSNFUG00015024257) PRPF40A (ENSNFUG00015023839) RPRM (ENSNFUG00015023801) ENSNFUG00015023799 GALNT13 (ENSNFUG00015023778) KCNJ3 (ENSNFUG00015023774) NR4A2A (ENSNFUG00015023773) ENSNFUG00015023770 GALNT5 (ENSNFUG00015023768) CYTIP (ENSNFUG00015023764) ENSNFUG00015023761 ACVR1C (ENSNFUG00015023758) ACVR1 (ENSNFUG00015023751) ENSNFUG00015023749 Turquoise killifish MODERN SPECIES 1625 ISYNA1 (ENSNFUG00015020013) TPGS1 (ENSNFUG00015020029) CABZ01085657.1 (ENSNFUG00015020034) ENSNFUG00015020039 gna11b (ENSNFUG00015020047) ENSNFUG00015020083 PPAP2C (ENSNFUG00015020095) ENSNFUG00015020103 theg (ENSNFUG00015020107) SHDA (ENSNFUG00015020113) CCDC94 (ENSNFUG00015020119) CARTPT (ENSNFUG00015020120) MAP1S (ENSNFUG00015020125) ENSNFUG00015020141 ENSNFUG00015020211 #21 SUMO3B (ENSNFUG00015020217) #22 TSPEAR (ENSNFUG00015020224) USP40 (ENSNFUG00015020236) FABP7A (ENSNFUG00015020247) ENSNFUG00015020256 ENSNFUG00015020269 fyna (ENSNFUG00015020380) MARCKSB (ENSNFUG00015022785) ENSNFUG00015022786 COL10A1 (ENSNFUG00015022787) fhl5 (ENSNFUG00015022788) fut9a (ENSNFUG00015022793) FUT9A (ENSNFUG00015022797) manea (ENSNFUG00015022810) ppp1cb (ENSNFUG00015022823) ENSNFUG00015022880 Cyprinodontoidei ANCESTRAL SPECIES 13 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00940000159241.r ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT01030000235131 ENSGT00940000161094 ENSGT00940000153988.A ENSGT00940000155773.b Poeciliinae ANCESTRAL SPECIES 25 ENSGT01030000235116 ENSGT00940000158208.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00940000159241.r ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT01030000235131 ENSGT00940000161094 ENSGT00940000153988.A ENSGT00940000155773.b Poecilia ANCESTRAL SPECIES 13 ENSGT01030000235116 ENSGT00940000158208.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00940000159241.r ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT01030000235131 ENSGT00940000161094 ENSGT00940000153988.A ENSGT00940000168997 Guppy MODERN SPECIES 450 MARCHF9 (ENSPREG00000009664) SMARCAL1 (ENSPREG00000009591) ENSPREG00000009577 nme9 (ENSPREG00000009546) zgc:162707 (ENSPREG00000009511) ehhadh (ENSPREG00000009505) tmem41aa (ENSPREG00000009491) igf2bp2a (ENSPREG00000009440) tra2b (ENSPREG00000009405) ENSPREG00000009384 ENSPREG00000009375 ANKZF1 (ENSPREG00000009367) glb1l (ENSPREG00000009301) ENSPREG00000009173 ENSPREG00000009135 #21 ENSPREG00000008916 #22 FMNL2 (ENSPREG00000008811) prpf40a (ENSPREG00000008757) GALNT13 (ENSPREG00000008734) KCNJ3 (ENSPREG00000008714) nr4a2a (ENSPREG00000008698) GALNT5 (ENSPREG00000008540) CYTIP (ENSPREG00000008497) ACVR1C (ENSPREG00000008469) ENSPREG00000008402 ENSPREG00000008391 upp2 (ENSPREG00000008378) PKP4 (ENSPREG00000008285) dap1b (ENSPREG00000008260) TANC1 (ENSPREG00000008231) WDSUB1 (ENSPREG00000008209) NAME_4 ANCESTRAL SPECIES 32 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00940000159241.r ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000160160 ENSGT00940000164733 ENSGT01030000235131 ENSGT00940000161094 ENSGT00940000153988.A Mummichog MODERN SPECIES 2402 ENSFHEG00000008422 MARCHF4 (ENSFHEG00000008402) SMARCAL1 (ENSFHEG00000008380) nme9 (ENSFHEG00000008367) zgc:162707 (ENSFHEG00000008323) ehhadh (ENSFHEG00000008315) tmem41aa (ENSFHEG00000008292) igf2bp2a (ENSFHEG00000008263) tra2b (ENSFHEG00000008203) ENSFHEG00000008189 ENSFHEG00000008172 ENSFHEG00000008104 glb1l (ENSFHEG00000008073) ENSFHEG00000007986 ENSFHEG00000007830 #21 ENSFHEG00000007817 #22 FMNL2 (ENSFHEG00000007764) prpf40a (ENSFHEG00000007602) rprmb (ENSFHEG00000007528) Ovalentaria_B ANCESTRAL SPECIES 12 ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.u.a #22 ENSGT00950000182895.a.b.v.k #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241.r ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A ENSGT00940000178980 Cichlidae ANCESTRAL SPECIES 14 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241.r ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000160160 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Pseudocrenilabrinae ANCESTRAL SPECIES 15 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241.r ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A ENSGT00940000155773.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 14 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241.r ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A ENSGT00940000155773.b Haplochromini ANCESTRAL SPECIES 19 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241.r ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000160160 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Haplochromini_A ANCESTRAL SPECIES 19 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241.r ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000160160 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Haplochromini_B ANCESTRAL SPECIES 17 ENSGT00950000183126.a.p.a.o.a ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241.r ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A ENSGT00940000155773.b Eastern happy MODERN SPECIES 7 ENSACLG00000016093 MARCHF4 (ENSACLG00000016071) SMARCAL1 (ENSACLG00000015990) nme9 (ENSACLG00000015875) zgc:162707 (ENSACLG00000015853) ehhadh (ENSACLG00000015819) tmem41aa (ENSACLG00000015796) igf2bp2a (ENSACLG00000015512) tra2b (ENSACLG00000015461) ENSACLG00000015432 ENSACLG00000015369 ANKZF1 (ENSACLG00000015301) glb1l (ENSACLG00000015236) ENSACLG00000015141 ENSACLG00000015115 #21 ENSACLG00000015103 #22 FMNL2 (ENSACLG00000014738) prpf40a (ENSACLG00000014480) rprmb (ENSACLG00000014467) GALNT13 (ENSACLG00000014387) KCNJ3 (ENSACLG00000014308) nr4a2a (ENSACLG00000014280) GALNT5 (ENSACLG00000014132) CYTIP (ENSACLG00000014105) ACVR1C (ENSACLG00000014045) ENSACLG00000013921 ENSACLG00000013824 upp2 (ENSACLG00000013866) CCDC148 (ENSACLG00000013790) PKP4 (ENSACLG00000013647) dap1b (ENSACLG00000013628) Pomacentridae ANCESTRAL SPECIES 19 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 ENSGT00940000154800.k.a ENSGT00950000182836.a Bicolor damselfish MODERN SPECIES 319 hs6st1b (ENSSPAG00000021350) uggt1 (ENSSPAG00000021207) ENSSPAG00000021178 ola1 (ENSSPAG00000021138) TRA2B (ENSSPAG00000021124) ENSSPAG00000021114 pcnt (ENSSPAG00000020840) ENSSPAG00000020796 atg9a (ENSSPAG00000020756) ENSSPAG00000020738 ENSSPAG00000020682 ENSSPAG00000020659 #21 sumo3a (ENSSPAG00000020380) #22 TSPEAR (ENSSPAG00000020305) ENSSPAG00000020265 fabp7a (ENSSPAG00000020252) ENSSPAG00000020243 fyna (ENSSPAG00000020207) marcksb (ENSSPAG00000020181) col10a1a (ENSSPAG00000020169) ENSSPAG00000020155 fhl5 (ENSSPAG00000020146) fut9a (ENSSPAG00000020129) manea (ENSSPAG00000020120) ppp1cb (ENSSPAG00000020109) ypel5 (ENSSPAG00000020098) lclat1 (ENSSPAG00000020081) lbh (ENSSPAG00000020068) Pomacentridae_A ANCESTRAL SPECIES 19 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b.a ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 ENSGT00940000154800.k.a ENSGT00950000182836.a Amphiprion ANCESTRAL SPECIES 12 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b.a ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 ENSGT00940000154800.k.a ENSGT00950000182836.a Clown anemonefish MODERN SPECIES 1261 hs6st1b (ENSAOCG00000019302) uggt1 (ENSAOCG00000019275) ENSAOCG00000002461 ENSAOCG00000019135 TRA2B (ENSAOCG00000019109) ENSAOCG00000019095 pcnt (ENSAOCG00000019038) zgc:112416 (ENSAOCG00000018529) atg9a (ENSAOCG00000018502) ENSAOCG00000018382 ENSAOCG00000018250 #21 ENSAOCG00000018240 #22 TSPEAR (ENSAOCG00000018213) ENSAOCG00000018160 Percomorphaceae_C ANCESTRAL SPECIES 12 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Percomorphaceae_D ANCESTRAL SPECIES 10 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Carangaria ANCESTRAL SPECIES 10 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Carangaria_A ANCESTRAL SPECIES 4 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b.d ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Seriola ANCESTRAL SPECIES 3 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b.d ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Yellowtail amberjack MODERN SPECIES 2176 ENSSLDG00000022186 ENSSLDG00000022174 #21 ENSSLDG00000022167 #22 TSPEAR (ENSSLDG00000022148) ENSSLDG00000022068 Greater amberjack MODERN SPECIES 62 ENSSDUG00000013474 d2hgdh (ENSSDUG00000013492) acvr1l (ENSSDUG00000013523) otomp (ENSSDUG00000013538) hs6st1b (ENSSDUG00000013575) uggt1 (ENSSDUG00000013603) ENSSDUG00000013686 ola1 (ENSSDUG00000013714) TRA2B (ENSSDUG00000013749) ENSSDUG00000013759 pcnt (ENSSDUG00000013810) zgc:112416 (ENSSDUG00000014069) atg9a (ENSSDUG00000014164) ENSSDUG00000014240 ENSSDUG00000014311 #21 ENSSDUG00000014318 #22 TSPEAR (ENSSDUG00000014330) ENSSDUG00000014402 fabp7a (ENSSDUG00000014441) ENSSDUG00000014457 ENSSDUG00000014487 fyna (ENSSDUG00000014501) marcksb (ENSSDUG00000014545) col10a1a (ENSSDUG00000014571) ENSSDUG00000014576 fhl5 (ENSSDUG00000014607) fut9a (ENSSDUG00000014616) manea (ENSSDUG00000014623) ppp1cb (ENSSDUG00000014645) ypel5 (ENSSDUG00000014673) lclat1 (ENSSDUG00000014681) Pleuronectoidei ANCESTRAL SPECIES 5 ENSGT00390000012355.A.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Tongue sole DUPLICATION Tongue sole MODERN SPECIES 258 ENSCSEG00000007517 #22 Tongue sole MODERN SPECIES 7 IKZF2 (ENSCSEG00000011862) ERBB4 (ENSCSEG00000011796) zgc:162707 (ENSCSEG00000011776) ENSCSEG00000011771 ehhadh (ENSCSEG00000011754) tmem41aa (ENSCSEG00000011740) igf2bp2a (ENSCSEG00000011718) tra2b (ENSCSEG00000011697) ENSCSEG00000011680 ENSCSEG00000011670 glb1l (ENSCSEG00000011644) ANKZF1 (ENSCSEG00000011588) ENSCSEG00000011572 ENSCSEG00000011541 ENSCSEG00000011534 #21 ENSCSEG00000011529 #22 ENSCSEG00000011527 FMNL2 (ENSCSEG00000011354) prpf40a (ENSCSEG00000011307) rprmb (ENSCSEG00000011301) GALNT13 (ENSCSEG00000011271) KCNJ3 (ENSCSEG00000011259) nr4a2a (ENSCSEG00000011241) GALNT5 (ENSCSEG00000011146) ENSCSEG00000011130 CYTIP (ENSCSEG00000011121) ACVR1C (ENSCSEG00000011100) ENSCSEG00000011078 upp2 (ENSCSEG00000011054) CCDC148 (ENSCSEG00000011023) PKP4 (ENSCSEG00000010921) Tongue sole MODERN SPECIES ythdf2 (ENSCSEG00000002716) vgll2b (ENSCSEG00000002722) ctsl.1 (ENSCSEG00000002733) qkia (ENSCSEG00000002782) pacrg (ENSCSEG00000002791) PTAFR (ENSCSEG00000002801) kdm1a (ENSCSEG00000002808) tmem30b (ENSCSEG00000002873) TRA2B (ENSCSEG00000002877) ENSCSEG00000002888 pcnt (ENSCSEG00000002898) atg9a (ENSCSEG00000002938) mns1 (ENSCSEG00000002966) ENSCSEG00000002982 ENSCSEG00000003006 #21 SUMO3 (ENSCSEG00000003010) #22 TSPEAR (ENSCSEG00000003018) ENSCSEG00000003038 fabp7a (ENSCSEG00000003055) ENSCSEG00000003061 fyna (ENSCSEG00000003064) marcksb (ENSCSEG00000003088) col10a1a (ENSCSEG00000003094) ENSCSEG00000003097 fhl5 (ENSCSEG00000003108) fut9a (ENSCSEG00000003166) manea (ENSCSEG00000003167) ppp1cb (ENSCSEG00000003172) ypel5 (ENSCSEG00000003183) lclat1 (ENSCSEG00000003184) lbh (ENSCSEG00000003194) Eupercaria DUPLICATION Eupercaria DUPLICATION Eupercaria ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.k.m.a #22 Tetraodontidae ANCESTRAL SPECIES ENSGT00940000155682.g.a #12 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k.m.a #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00940000161094 ENSGT00940000153988.A ENSGT00940000155773.b Fugu MODERN SPECIES xrcc5 (ENSTRUG00000011292) COL6A2 (ENSTRUG00000010965) #12 MARCHF4 (ENSTRUG00000010920) SMARCAL1 (ENSTRUG00000010701) nme9 (ENSTRUG00000010490) zgc:162707 (ENSTRUG00000027774) ehhadh (ENSTRUG00000010383) tmem41aa (ENSTRUG00000010355) igf2bp2a (ENSTRUG00000009908) ENSTRUG00000020345 fgc6ast2 (ENSTRUG00000009748) ANKZF1 (ENSTRUG00000009630) glb1l (ENSTRUG00000009251) ENSTRUG00000008967 ENSTRUG00000024914 #21 sumo3a (ENSTRUG00000025879) #22 FMNL2 (ENSTRUG00000008302) prpf40a (ENSTRUG00000007825) rprmb (ENSTRUG00000007817) GALNT13 (ENSTRUG00000007687) KCNJ3 (ENSTRUG00000007530) nr4a2a (ENSTRUG00000007433) GALNT5 (ENSTRUG00000007373) ENSTRUG00000024709 CYTIP (ENSTRUG00000007288) ACVR1C (ENSTRUG00000007134) ENSTRUG00000007007 upp2 (ENSTRUG00000006794) CCDC148 (ENSTRUG00000024154) PKP4 (ENSTRUG00000006426) dap1b (ENSTRUG00000020081) Tetraodon MODERN SPECIES 13 MARCHF4 (ENSTNIG00000016466) SMARCAL1 (ENSTNIG00000016467) nme9 (ENSTNIG00000016468) zgc:162707 (ENSTNIG00000016469) ehhadh (ENSTNIG00000016470) tmem41aa (ENSTNIG00000016471) igf2bp2a (ENSTNIG00000016472) tra2b (ENSTNIG00000000790) ENSTNIG00000016473 ENSTNIG00000016474 ANKZF1 (ENSTNIG00000016475) glb1l (ENSTNIG00000016476) ENSTNIG00000000645 ENSTNIG00000016477 ENSTNIG00000016478 #21 ENSTNIG00000016479 #22 FMNL2 (ENSTNIG00000016480) prpf40a (ENSTNIG00000016481) GALNT13 (ENSTNIG00000016482) KCNJ3 (ENSTNIG00000016483) nr4a2a (ENSTNIG00000016484) ENSTNIG00000016485 ENSTNIG00000016486 ENSTNIG00000001555 ENSTNIG00000016487 ACVR1C (ENSTNIG00000016488) ENSTNIG00000016489 upp2 (ENSTNIG00000016490) CCDC148 (ENSTNIG00000016491) PKP4 (ENSTNIG00000016492) dap1b (ENSTNIG00000001021) Eupecaria_A ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.k.m.a #22 Eupecaria_B ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.k.m.a #22 Perciformes ANCESTRAL SPECIES ENSGT00950000182895.a.b.v.k.m.a #22 Cottioidei ANCESTRAL SPECIES 14 ENSGT00940000155682.g.a #12 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k.m.a #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00940000161094 ENSGT00940000153988.A ENSGT00940000155773.b ENSGT00940000154574.d Lumpfish MODERN SPECIES 13 MARCHF4 (ENSCLMG00005020098) SMARCAL1 (ENSCLMG00005020081) ENSCLMG00005020079 nme9 (ENSCLMG00005020077) zgc:162707 (ENSCLMG00005020075) ehhadh (ENSCLMG00005020073) tmem41aa (ENSCLMG00005020072) igf2bp2a (ENSCLMG00005020011) tra2b (ENSCLMG00005019973) ENSCLMG00005019965 ENSCLMG00005019962 ANKZF1 (ENSCLMG00005019959) glb1l (ENSCLMG00005019763) ENSCLMG00005019559 ENSCLMG00005019553 #21 ENSCLMG00005019551 #22 FMNL2 (ENSCLMG00005013134) prpf40a (ENSCLMG00005012563) rprmb (ENSCLMG00005012559) GALNT13 (ENSCLMG00005012289) KCNJ3 (ENSCLMG00005012288) nr4a2a (ENSCLMG00005012245) GALNT5 (ENSCLMG00005012243) ENSCLMG00005012242 CYTIP (ENSCLMG00005012240) ACVR1C (ENSCLMG00005012238) ENSCLMG00005012237 upp2 (ENSCLMG00005012225) CCDC148 (ENSCLMG00005012207) PKP4 (ENSCLMG00005009362) dap1b (ENSCLMG00005009337) Eupercaria ANCESTRAL SPECIES 9 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k.m.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Eupecaria_A ANCESTRAL SPECIES 10 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k.m.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Ballan wrasse MODERN SPECIES 473 hs6st1b (ENSLBEG00000018727) uggt1 (ENSLBEG00000018783) ENSLBEG00000018876 ola1 (ENSLBEG00000018929) TRA2B (ENSLBEG00000018978) ENSLBEG00000018995 pcnt (ENSLBEG00000019132) atg9a (ENSLBEG00000019551) ENSLBEG00000019614 ENSLBEG00000019731 #21 ENSLBEG00000019743 #22 TSPEAR (ENSLBEG00000019781) ENSLBEG00000019893 fabp7a (ENSLBEG00000020029) Eupecaria_B ANCESTRAL SPECIES 11 ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k.m.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Perciformes ANCESTRAL SPECIES 12 ENSGT00390000012355.A.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k.m.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Cottioidei ANCESTRAL SPECIES 8 ENSGT00390000012355.A.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k.m.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Lumpfish MODERN SPECIES 14 nsd2 (ENSCLMG00005005973) d2hgdh (ENSCLMG00005005926) acvr1l (ENSCLMG00005005907) otomp (ENSCLMG00005005903) ENSCLMG00005005902 hs6st1b (ENSCLMG00005005851) uggt1 (ENSCLMG00005005178) ENSCLMG00005005163 ola1 (ENSCLMG00005004853) TRA2B (ENSCLMG00005004845) ENSCLMG00005004839 ENSCLMG00005004838 atg9a (ENSCLMG00005004828) ENSCLMG00005003159 ENSCLMG00005003092 #21 ENSCLMG00005003024 #22 TSPEAR (ENSCLMG00005002993) ENSCLMG00005002932 fabp7a (ENSCLMG00005002891) ENSCLMG00005002867 ENSCLMG00005002853 fyna (ENSCLMG00005002806) marcksb (ENSCLMG00005021741) col10a1a (ENSCLMG00005021740) ENSCLMG00005021738 fhl5 (ENSCLMG00005021737) fut9a (ENSCLMG00005021735) manea (ENSCLMG00005021734) ENSCLMG00005021600 ypel5 (ENSCLMG00005021592) lclat1 (ENSCLMG00005021591) Stickleback MODERN SPECIES 15 keap1a (ENSGACG00000009976) SSBP4 (ENSGACG00000009986) ENSGACG00000009994 ENSGACG00000009995 d2hgdh (ENSGACG00000010002) acvr1l (ENSGACG00000010017) otomp (ENSGACG00000010021) hs6st1b (ENSGACG00000010025) uggt1 (ENSGACG00000010029) ENSGACG00000010072 ola1 (ENSGACG00000010083) TRA2B (ENSGACG00000010109) ENSGACG00000010116 atg9a (ENSGACG00000010122) ENSGACG00000010131 #21 ENSGACG00000010136 #22 TSPEAR (ENSGACG00000010149) ENSGACG00000010156 fabp7a (ENSGACG00000010166) fyna (ENSGACG00000010180) marcksb (ENSGACG00000010228) ENSGACG00000010231 col10a1a (ENSGACG00000010232) ENSGACG00000010236 fhl5 (ENSGACG00000010242) fut9a (ENSGACG00000010254) manea (ENSGACG00000010260) ppp1cb (ENSGACG00000010272) ENSGACG00000010331 ypel5 (ENSGACG00000010339) lclat1 (ENSGACG00000010345) Perciformes_a ANCESTRAL SPECIES 10 ENSGT00390000012355.A.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k.m.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00940000154800.k.a ENSGT00950000182836.a Channel bull blenny MODERN SPECIES 14 ENSCGOG00000024458 ENSCGOG00000024459 d2hgdh (ENSCGOG00000024464) acvr1l (ENSCGOG00000024483) otomp (ENSCGOG00000024508) hs6st1b (ENSCGOG00000024510) uggt1 (ENSCGOG00000024532) ENSCGOG00000024554 ola1 (ENSCGOG00000024558) TRA2B (ENSCGOG00000024584) ENSCGOG00000024585 ENSCGOG00000024592 atg9a (ENSCGOG00000024593) ENSCGOG00000024603 ENSCGOG00000024638 #21 ENSCGOG00000024639 #22 TSPEAR (ENSCGOG00000024640) ENSCGOG00000024642 fabp7a (ENSCGOG00000024645) ENSCGOG00000024648 fyna (ENSCGOG00000024700) marcksb (ENSCGOG00000024730) col10a1a (ENSCGOG00000024731) ENSCGOG00000024732 fhl5 (ENSCGOG00000024733) fut9a (ENSCGOG00000024734) manea (ENSCGOG00000024735) ENSCGOG00000024736 ppp1cb (ENSCGOG00000024737) ypel5 (ENSCGOG00000024738) lclat1 (ENSCGOG00000024739) Pike perch MODERN SPECIES 24 ENSSLUG00000005431 d2hgdh (ENSSLUG00000005451) acvr1l (ENSSLUG00000005508) otomp (ENSSLUG00000005563) hs6st1b (ENSSLUG00000005585) uggt1 (ENSSLUG00000005775) ENSSLUG00000008173 ola1 (ENSSLUG00000008182) TRA2B (ENSSLUG00000008202) ENSSLUG00000008209 ENSSLUG00000008218 atg9a (ENSSLUG00000008244) ENSSLUG00000008287 ENSSLUG00000008296 ENSSLUG00000008321 #21 ENSSLUG00000008337 #22 TSPEAR (ENSSLUG00000008375) ENSSLUG00000008403 fabp7a (ENSSLUG00000008420) ENSSLUG00000008440 ENSSLUG00000008526 fyna (ENSSLUG00000008646) cirbpa (ENSSLUG00000010554) ENSSLUG00000010562 marcksb (ENSSLUG00000010569) col10a1a (ENSSLUG00000010573) ENSSLUG00000010577 fhl5 (ENSSLUG00000010587) fut9a (ENSSLUG00000010591) manea (ENSSLUG00000010594) ppp1cb (ENSSLUG00000010635) Eupecaria_C ANCESTRAL SPECIES 8 ENSGT00940000155914.c.b.d ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k.m.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00990000204856 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 Eupercaria_incertae_sedis ANCESTRAL SPECIES 16 ENSGT00940000155914.c.b.d ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000011514 ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k.m.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00990000204856 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a ENSGT00390000016054.a ENSGT00940000154644.jb.b.f.b ENSGT00530000063883 Large yellow croaker MODERN SPECIES 495 ENSLCRG00005008482 ENSLCRG00005008484 d2hgdh (ENSLCRG00005008486) acvr1l (ENSLCRG00005008695) otomp (ENSLCRG00005008923) hs6st1b (ENSLCRG00005008924) uggt1 (ENSLCRG00005008936) ENSLCRG00005009067 ola1 (ENSLCRG00005009072) TRA2B (ENSLCRG00005009291) ENSLCRG00005009295 zgc:112416 (ENSLCRG00005009300) atg9a (ENSLCRG00005009303) ENSLCRG00005009335 ENSLCRG00005011487 #21 ENSLCRG00005011490 #22 TSPEAR (ENSLCRG00005011497) ENSLCRG00005011511 fabp7a (ENSLCRG00005011544) ENSLCRG00005011563 ENSLCRG00005011585 ENSLCRG00005011588 ENSLCRG00005011589 fyna (ENSLCRG00005011621) marcksb (ENSLCRG00005014533) col10a1a (ENSLCRG00005014534) ENSLCRG00005014536 fhl5 (ENSLCRG00005014538) fut9a (ENSLCRG00005014540) manea (ENSLCRG00005014541) ppp1cb (ENSLCRG00005014543) Tetraodontidae ANCESTRAL SPECIES 3 ENSGT00950000183049.C.a.b ENSGT00940000155914.c.b ENSGT00550000075086 ENSGT00940000166078 ENSGT00940000166763 ENSGT00950000183071.a.a.b.c ENSGT00390000004600.b.a ENSGT00940000155099.k.b ENSGT00390000000673.a.b ENSGT00950000183009.db.a ENSGT00940000155489.a ENSGT00730000110871.a.a.a.b ENSGT00390000014839.b ENSGT00940000164909.e.b ENSGT00390000004977.d.b #21 ENSGT00950000182895.a.b.v.k.m.b #22 ENSGT00510000047718.c ENSGT00940000157267 ENSGT00940000156713.n ENSGT01090000260229 ENSGT00940000164609.b ENSGT00940000155462.`b.a ENSGT00730000111419.b ENSGT00940000154317.a.b.a ENSGT00530000063596.A.j ENSGT00950000183028.a.a.b ENSGT00940000155095.i.a.i ENSGT00940000155095.i.a.j ENSGT00390000016054.a ENSGT00940000154644.jb.b.e ENSGT00530000063883 Tetraodon MODERN SPECIES 1 keap1a (ENSTNIG00000017201) SSBP4 (ENSTNIG00000017202) ENSTNIG00000017203 d2hgdh (ENSTNIG00000017204) acvr1l (ENSTNIG00000002260) otomp (ENSTNIG00000017205) hs6st1b (ENSTNIG00000017206) uggt1 (ENSTNIG00000017207) ENSTNIG00000017208 ola1 (ENSTNIG00000017209) TRA2B (ENSTNIG00000017210) ENSTNIG00000017211 atg9a (ENSTNIG00000001749) ENSTNIG00000017212 ENSTNIG00000017213 #21 ENSTNIG00000017214 #22 TSPEAR (ENSTNIG00000017215) ENSTNIG00000017216 fabp7a (ENSTNIG00000017217) ENSTNIG00000017218 fyna (ENSTNIG00000017219) marcksb (ENSTNIG00000017220) fyna (ENSTNIG00000017221) marcksb (ENSTNIG00000000080) col10a1a (ENSTNIG00000017222) fhl5 (ENSTNIG00000017223) fut9a (ENSTNIG00000017224) fut9a (ENSTNIG00000017225) manea (ENSTNIG00000017227) ppp1cb (ENSTNIG00000017228) ENSTNIG00000017229 Eupercaria ANCESTRAL SPECIES 25 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k.n #22 ENSGT00940000168354 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a Eupecaria_A ANCESTRAL SPECIES 24 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000177394 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k.n #22 ENSGT00940000168354 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a Eupecaria_B ANCESTRAL SPECIES 24 ENSGT00940000155682.g.a #12 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k.n #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Eupecaria_C ANCESTRAL SPECIES 24 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k.n #22 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Eupercaria_incertae_sedis ANCESTRAL SPECIES 24 ENSGT00940000155682.g.a #12 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000161051.a.a.a.a.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k.n #22 ENSGT00950000182895.a.b.u.b #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A European seabass DUPLICATION European seabass MODERN SPECIES 5 ENSDLAG00005014466 ENSDLAG00005018228 ENSDLAG00005019485 #12 MARCHF4 (ENSDLAG00005019516) SMARCAL1 (ENSDLAG00005019533) nme9 (ENSDLAG00005019963) ehhadh (ENSDLAG00005020031) tmem41aa (ENSDLAG00005027741) igf2bp2a (ENSDLAG00005020121) tra2b (ENSDLAG00005021470) ENSDLAG00005000115 ENSDLAG00005000133 ENSDLAG00005000283 ENSDLAG00005000671 ENSDLAG00005030476 #21 ENSDLAG00005030680 #22 ENSDLAG00005000917 PRPF40A (ENSDLAG00005001258) RPRM (ENSDLAG00005031449) GALNT13 (ENSDLAG00005003545) nr4a2a (ENSDLAG00005003924) ENSDLAG00005003961 GALNT5 (ENSDLAG00005004000) CYTIP (ENSDLAG00005004012) ACVR1C (ENSDLAG00005004029) ENSDLAG00005004101 ENSDLAG00005004188 UPP2 (ENSDLAG00005004214) CCDC148 (ENSDLAG00005033481) PKP4 (ENSDLAG00005004377) dap1b (ENSDLAG00005005030) European seabass MODERN SPECIES 2 keap1a (ENSDLAG00005009923) ENSDLAG00005033152 ENSDLAG00005009894 ENSDLAG00005009882 d2hgdh (ENSDLAG00005009591) acvr1l (ENSDLAG00005009489) otomp (ENSDLAG00005009478) ENSDLAG00005009425 uggt1 (ENSDLAG00005008037) ENSDLAG00005007955 ENSDLAG00005007837 ENSDLAG00005032411 ENSDLAG00005007783 atg9a (ENSDLAG00005007653) ENSDLAG00005007433 ENSDLAG00005029107 #22 ENSDLAG00005007352 ENSDLAG00005007273 fabp7a (ENSDLAG00005027308) ENSDLAG00005032112 ENSDLAG00005030192 ENSDLAG00005007243 fyna (ENSDLAG00005004742) marcksb (ENSDLAG00005004646) col10a1a (ENSDLAG00005004562) ENSDLAG00005030031 ENSDLAG00005004516 fut9a (ENSDLAG00005033745) ENSDLAG00005004495 ppp1cb (ENSDLAG00005004325) ENSDLAG00005004177 Gilthead seabream DUPLICATION Gilthead seabream MODERN SPECIES 7 ENSSAUG00010027551 ENSSAUG00010027563 ENSSAUG00010027566 ENSSAUG00010027567 ENSSAUG00010001620 ENSSAUG00010001628 ENSSAUG00010001643 ENSSAUG00010001650 ENSSAUG00010001659 ENSSAUG00010001666 ENSSAUG00010001673 ENSSAUG00010001678 atg9a (ENSSAUG00010001736) ENSSAUG00010001859 ENSSAUG00010002213 #21 ENSSAUG00010002232 #22 TSPEAR (ENSSAUG00010002249) ENSSAUG00010002258 fabp7a (ENSSAUG00010002273) ENSSAUG00010002286 ENSSAUG00010002307 ENSSAUG00010002308 fyna (ENSSAUG00010002435) marcksb (ENSSAUG00010007973) col10a1a (ENSSAUG00010007974) ENSSAUG00010007975 fhl5 (ENSSAUG00010007981) fut9a (ENSSAUG00010007988) manea (ENSSAUG00010007989) ppp1cb (ENSSAUG00010007999) ENSSAUG00010008373 Gilthead seabream MODERN SPECIES 23 ENSSAUG00010027394 #12 MARCHF4 (ENSSAUG00010027393) SMARCAL1 (ENSSAUG00010027379) nme9 (ENSSAUG00010027377) zgc:162707 (ENSSAUG00010027376) ehhadh (ENSSAUG00010027375) tmem41aa (ENSSAUG00010027374) igf2bp2a (ENSSAUG00010027330) tra2b (ENSSAUG00010027319) ENSSAUG00010027315 ENSSAUG00010027313 ANKZF1 (ENSSAUG00010027309) glb1l (ENSSAUG00010027170) ENSSAUG00010026994 ENSSAUG00010026927 #21 sumo3a (ENSSAUG00010026924) #22 prpf40a (ENSSAUG00010026723) FMNL2 (ENSSAUG00010026687) rprmb (ENSSAUG00010026685) GALNT13 (ENSSAUG00010026683) KCNJ3 (ENSSAUG00010026682) nr4a2a (ENSSAUG00010026680) ENSSAUG00010026679 ENSSAUG00010026678 GALNT5 (ENSSAUG00010026677) CYTIP (ENSSAUG00010026676) ACVR1C (ENSSAUG00010026675) ENSSAUG00010026674 ENSSAUG00010026673 upp2 (ENSSAUG00010026672) CCDC148 (ENSSAUG00010026671) Perciformes ANCESTRAL SPECIES 23 ENSGT00940000155682.g.a #12 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k.n #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Perciformes_a ANCESTRAL SPECIES 23 ENSGT00940000155682.g.a #12 ENSGT00940000158179.b ENSGT00940000157608 ENSGT00940000164537 ENSGT00390000006618 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00940000161051.a.a.a.a.a ENSGT00940000154856.A.a.d ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00940000164909.e.a ENSGT00390000004977.d.a #21 ENSGT00950000182895.a.b.v.k.n #22 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00650000094711 ENSGT00530000063734.a ENSGT00940000158842 ENSGT00940000164733 ENSGT00390000014376.c.a ENSGT00940000161094 ENSGT00940000153988.A Pike perch MODERN SPECIES 1 MARCHF4 (ENSSLUG00000023443) SMARCAL1 (ENSSLUG00000023356) nme9 (ENSSLUG00000023329) ENSSLUG00000023325 zgc:162707 (ENSSLUG00000023322) ehhadh (ENSSLUG00000023319) tmem41aa (ENSSLUG00000023315) igf2bp2a (ENSSLUG00000023280) tra2b (ENSSLUG00000023261) ENSSLUG00000023250 ENSSLUG00000023243 ANKZF1 (ENSSLUG00000023223) glb1l (ENSSLUG00000022637) ENSSLUG00000021961 ENSSLUG00000021901 #21 ENSSLUG00000021895 #22 ENSSLUG00000021892 FMNL2 (ENSSLUG00000021788) prpf40a (ENSSLUG00000021650) rprmb (ENSSLUG00000021626) GALNT13 (ENSSLUG00000021561) KCNJ3 (ENSSLUG00000021544) nr4a2a (ENSSLUG00000021521) GALNT5 (ENSSLUG00000021514) ENSSLUG00000021511 CYTIP (ENSSLUG00000021507) ACVR1C (ENSSLUG00000021498) ENSSLUG00000021475 ENSSLUG00000021465 upp2 (ENSSLUG00000021462) CCDC148 (ENSSLUG00000021457) Channel bull blenny MODERN SPECIES 13 COL6A2 (ENSCGOG00000024729) #12 MARCHF4 (ENSCGOG00000024728) SMARCAL1 (ENSCGOG00000024727) nme9 (ENSCGOG00000024726) zgc:162707 (ENSCGOG00000024725) ehhadh (ENSCGOG00000024724) tmem41aa (ENSCGOG00000024723) igf2bp2a (ENSCGOG00000024722) tra2b (ENSCGOG00000024721) ENSCGOG00000024720 ENSCGOG00000024719 ANKZF1 (ENSCGOG00000024717) glb1l (ENSCGOG00000024716) ENSCGOG00000024715 ENSCGOG00000024714 #21 sumo3a (ENSCGOG00000024713) #22 FMNL2 (ENSCGOG00000024699) prpf40a (ENSCGOG00000024649) rprmb (ENSCGOG00000024635) GALNT13 (ENSCGOG00000024600) KCNJ3 (ENSCGOG00000024583) nr4a2a (ENSCGOG00000024582) ENSCGOG00000024581 GALNT5 (ENSCGOG00000024568) ENSCGOG00000024567 CYTIP (ENSCGOG00000024565) ACVR1C (ENSCGOG00000024563) ENSCGOG00000024561 ENSCGOG00000024560 upp2 (ENSCGOG00000024556) CCDC148 (ENSCGOG00000024555) Elephant shark DUPLICATION Elephant shark MODERN SPECIES 1495 galk1 (ENSCMIG00000020054) xylt2 (ENSCMIG00000020059) ENSCMIG00000000186 mrpl27 (ENSCMIG00000000192) ENSCMIG00000000223 LRRC59 (ENSCMIG00000000241) acsf2 (ENSCMIG00000000326) CHAD (ENSCMIG00000000530) rsad1 (ENSCMIG00000000534) ENSCMIG00000000545 EPN3 (ENSCMIG00000000559) gga3a (ENSCMIG00000000593) nherf1a (ENSCMIG00000000675) NUP85 (ENSCMIG00000000752) ENSCMIG00000000885 sumo2 (ENSCMIG00000000894) #22 NT5C (ENSCMIG00000000904) mrps7 (ENSCMIG00000000910) ENSCMIG00000000918 ENSCMIG00000000925 ENSCMIG00000000932 llgl2 (ENSCMIG00000000979) GALR2 (ENSCMIG00000001021) srp68 (ENSCMIG00000001120) evpla (ENSCMIG00000001300) acox1 (ENSCMIG00000001444) pik3cg (ENSCMIG00000001819) ENSCMIG00000001874 FBF1 (ENSCMIG00000001887) mrpl38 (ENSCMIG00000001923) ENSCMIG00000001963 Elephant shark MODERN SPECIES 1616 SYT6 (ENSCMIG00000008747) ENSCMIG00000008754 DHRS4 (ENSCMIG00000008759) KCNJ14 (ENSCMIG00000008766) ENSCMIG00000008768 ENSCMIG00000008773 ENSCMIG00000008779 #22 mapk8ip3 (ENSCMIG00000008895) NME3 (ENSCMIG00000009215) rhbdl1 (ENSCMIG00000009217) stub1 (ENSCMIG00000009221) fbxl16 (ENSCMIG00000009223) ENSCMIG00000009224 CRAMP1 (ENSCMIG00000009227) wdr24 (ENSCMIG00000009228) galr2b (ENSCMIG00000009231) smim22 (ENSCMIG00000009233) rogdi (ENSCMIG00000009239) glyr1 (ENSCMIG00000009245) UBN1 (ENSCMIG00000009254) ppl (ENSCMIG00000009260) ENSCMIG00000009261