Eutheria ANCESTRAL SPECIES 5 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00940000163601 ENSGT00940000162768.B ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00940000163258 #27 ENSGT00940000163845 #30 ENSGT00940000158579 #29 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 ENSGT00940000158579 #29 ENSGT00940000163845 #30 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163258 #27 ENSGT00940000163845 #30 ENSGT00940000158579 #29 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Primates ANCESTRAL SPECIES 1 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163258 #27 ENSGT00940000163845 #30 ENSGT00940000158579 #29 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Haplorrhini ANCESTRAL SPECIES 22 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163258.i #27 ENSGT00940000163845 #30 ENSGT00940000158579 #29 ENSGT00940000163527 #25 ENSGT00940000164049 #26 ENSGT00940000163258.j ##27 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 Simiiformes ANCESTRAL SPECIES 1 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000158579.l.a ##29 ENSGT00940000163258.i.a ##27 ENSGT00940000163845.c ##30 ENSGT00940000163258.i.b #27 ENSGT00940000158579.l.b.b.b ##29 ENSGT00940000163258.j ##27 ENSGT00940000158579.l.b.b.a #29 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 25 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b #22 ENSGT00940000158193 #23 ENSGT00940000158579.l.a ##29 ENSGT00940000163258.i.a ##27 ENSGT00940000163845.c ##30 ENSGT00940000163258.i.b #27 ENSGT00940000158579.l.b.b.b ##29 ENSGT00940000163258.j ##27 ENSGT00940000158579.l.b.b.a #29 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 Cercopithecidae ANCESTRAL SPECIES 28 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b #22 ENSGT00940000158193 #23 ENSGT00940000158579.l.a ##29 ENSGT00940000163258.j ##27 ENSGT00940000158579.l.b.b.b ##29 ENSGT00940000163258.i.b #27 ENSGT00940000163845.c ##30 ENSGT00940000158579.l.b.b.a.e #29 ENSGT00940000158579.l.b.b.a.f ##29 ENSGT00940000158579.l.b.a #28 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 Cercopithecinae ANCESTRAL SPECIES 23 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00900000140979.a.a.`b.a.o.a ENSGT00390000003873 ENSGT00910000147401 ENSGT00950000182836.b.b.b.a Cercopithecinae_a DUPLICATION Cercopithecinae_a DUPLICATION Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.b.e.b #22 Macaca ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.b.e.b #22 Macaca_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.b.e.b #22 Rhesus MODERN SPECIES 13 ENSMMUG00000064313 #7 SPATC1L (ENSMMUG00000058335) #8 FTCD (ENSMMUG00000022324) #9 COL6A2 (ENSMMUG00000022317) #10 ENSMMUG00000055486 #11 COL6A1 (ENSMMUG00000000544) #12 PCBP3 (ENSMMUG00000003825) #13 SLC19A1 (ENSMMUG00000004477) #14 COL18A1 (ENSMMUG00000004472) #15 POFUT2 (ENSMMUG00000010700) #16 ADARB1 (ENSMMUG00000010695) #17 ENSMMUG00000061023 #18 SLX9 (ENSMMUG00000000953) #19 ITGB2 (ENSMMUG00000000951) #20 PTTG1IP (ENSMMUG00000046352) #21 SUMO3 (ENSMMUG00000048545) #22 UBE2G2 (ENSMMUG00000045077) #23 TSPEAR (ENSMMUG00000022556) #24 ENSMMUG00000022561 #25 KRTAP10-9 (ENSMMUG00000043221) #26 KRTAP10-8 (ENSMMUG00000048049) #27 ENSMMUG00000030497 #28 ENSMMUG00000022558 #29 KRTAP10-10 (ENSMMUG00000022559) #30 LRRC3 (ENSMMUG00000049755) #31 TRPM2 (ENSMMUG00000004175) #32 CFAP410 (ENSMMUG00000049578) #33 PFKL (ENSMMUG00000004173) #34 AIRE (ENSMMUG00000004168) #35 DNMT3L (ENSMMUG00000010648) #36 ICOSLG (ENSMMUG00000010647) #37 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.b.e.a ##22 Macaca ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.b.e.a ##22 Macaca_a ANCESTRAL SPECIES 15 ENSGT00940000154864.b ENSGT00940000155564 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a ENSGT00390000014001.a ENSGT00940000164709.a.b.b.a.a.b.a.a.a.a.a.a.a.b.b ENSGT00940000157837 ENSGT00940000157361 ENSGT01100000263543.a.g.a.a.a.a ENSGT00950000182895.a.b.j.b.e.a ##22 ENSGT00940000158042 ENSGT00390000005537 ENSGT01100000263539.b.a.a.a.b.b.b.a.b.b.a.a.b ENSGT00940000156983.a.a ENSGT00940000156467 ENSGT01100000263493.a.b.a.a.a.a.a.a.a.a.a.a.a.a.a.a ##11 ENSGT00940000158732 ENSGT00390000018318.u.b.a.b.a.a.a ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000153408.B Crab-eating macaque MODERN SPECIES 4 ENSMFAG00000055004 CLHC1 (ENSMFAG00000039539) ENSMFAG00000037923 MTIF2 (ENSMFAG00000044949) ENSMFAG00000043775 ENSMFAG00000055613 CCDC88A (ENSMFAG00000037041) CFAP36 (ENSMFAG00000010897) PPP4R3B (ENSMFAG00000037701) PNPT1 (ENSMFAG00000001927) ENSMFAG00000058693 EFEMP1 (ENSMFAG00000044235) CCDC85A (ENSMFAG00000044378) ENSMFAG00000061252 ENSMFAG00000048944 SUMO3 (ENSMFAG00000009821) ##22 VRK2 (ENSMFAG00000031394) FANCL (ENSMFAG00000042101) ENSMFAG00000057303 ENSMFAG00000050088 BCL11A (ENSMFAG00000016402) ENSMFAG00000047975 ENSMFAG00000044508 ENSMFAG00000052777 PAPOLG (ENSMFAG00000042450) ENSMFAG00000056134 ##11 REL (ENSMFAG00000038696) ENSMFAG00000064635 PUS10 (ENSMFAG00000000611) PEX13 (ENSMFAG00000042959) SANBR (ENSMFAG00000007392) Rhesus MODERN SPECIES 4 EML6 (ENSMMUG00000021296) RTN4 (ENSMMUG00000021299) CLHC1 (ENSMMUG00000011346) RPS27A (ENSMMUG00000015563) MTIF2 (ENSMMUG00000030833) ENSMMUG00000019075 CCDC88A (ENSMMUG00000003003) CFAP36 (ENSMMUG00000007000) PPP4R3B (ENSMMUG00000007001) PNPT1 (ENSMMUG00000007003) ENSMMUG00000060312 EFEMP1 (ENSMMUG00000016872) ENSMMUG00000056218 CCDC85A (ENSMMUG00000015888) ENSMMUG00000064261 ENSMMUG00000002024 ##22 VRK2 (ENSMMUG00000002025) ENSMMUG00000064756 FANCL (ENSMMUG00000002026) ENSMMUG00000060918 BCL11A (ENSMMUG00000011303) PAPOLG (ENSMMUG00000000498) ENSMMUG00000057135 ##11 REL (ENSMMUG00000010834) ENSMMUG00000055963 PUS10 (ENSMMUG00000005685) ENSMMUG00000052940 PEX13 (ENSMMUG00000005687) SANBR (ENSMMUG00000021990) C13H2orf74 (ENSMMUG00000041555) AHSA2 (ENSMMUG00000008097) Cercopithecinae_b ANCESTRAL SPECIES 15 ENSGT00390000011103.A ENSGT00390000005045 ENSGT00940000154864.b ENSGT00940000155564 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b ENSGT00910000144152.a.b.t ENSGT00900000141103 ENSGT00440000033965 ENSGT00940000155559.b ENSGT00390000012785 ENSGT00390000018199.b.b.a ENSGT00390000014001.a.b ENSGT00940000157837 ENSGT00940000157361 ENSGT00950000182895.a.b.j.b.e.a ##22 ENSGT00940000158042 ENSGT00390000005537 ENSGT00530000063174.a.i.f ENSGT00940000156983.a.a ENSGT01030000234579.A.b.w ENSGT00390000008802.m.a.a ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000007529 ENSGT00390000016883 ENSGT00390000008178 ENSGT00390000004911 ENSGT00940000157344 ENSGT00940000158659 ENSGT00940000155413.l.a.b Olive baboon MODERN SPECIES 5 EML6 (ENSPANG00000004287) RTN4 (ENSPANG00000005683) CLHC1 (ENSPANG00000016915) RPS27A (ENSPANG00000034863) MTIF2 (ENSPANG00000014549) ENSPANG00000000623 CCDC88A (ENSPANG00000021274) PPP4R3B (ENSPANG00000022844) CFAP36 (ENSPANG00000022522) ENSPANG00000038384 ENSPANG00000031278 EFEMP1 (ENSPANG00000022521) ENSPANG00000041504 ENSPANG00000043733 CCDC85A (ENSPANG00000016914) ENSPANG00000010717 ##22 VRK2 (ENSPANG00000014544) FANCL (ENSPANG00000021497) ENSPANG00000021826 BCL11A (ENSPANG00000018170) ENSPANG00000000672 PAPOLG (ENSPANG00000014543) REL (ENSPANG00000006148) PUS10 (ENSPANG00000018036) PEX13 (ENSPANG00000022181) ENSPANG00000017323 ENSPANG00000039323 C2orf74 (ENSPANG00000035894) ENSPANG00000016913 USP34 (ENSPANG00000025375) XPO1 (ENSPANG00000006892) Cercopithecinae_a ANCESTRAL SPECIES 22 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b.f ##22 ENSGT00940000158193 #23 ENSGT00940000163527.c.d #25 ENSGT00940000163527.d ##25 ENSGT00940000164049.b.a #26 ENSGT00940000163527.c.c ##25 ENSGT00940000158579.l.b.b.b ##29 ENSGT00940000163258.i.b #27 ENSGT00940000163845.c ##30 ENSGT00940000158579.l.a ##29 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 Macaca ANCESTRAL SPECIES 3 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b.f ##22 ENSGT00940000158193 #23 ENSGT00940000163527.c.d #25 ENSGT00940000164049.b.a #26 ENSGT00940000163258.i.b #27 ENSGT00940000163845.c ##30 ENSGT00940000158579.l.b.a #28 ENSGT00510000047718 #24 ENSGT00940000158579.l.b.b.a.e #29 ENSGT00940000158579.l.a ##29 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 Macaca_a ANCESTRAL SPECIES 22 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000163601 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b.f ##22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000163527.c.d #25 ENSGT00940000164049.b.a #26 ENSGT00940000163258.i.b #27 ENSGT00940000158579.l.b.a #28 ENSGT00940000158579.l.b.b.a.e #29 ENSGT00940000163845.d #30 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 Crab-eating macaque MODERN SPECIES 13 MCM3AP (ENSMFAG00000041104) LSS (ENSMFAG00000034060) SPATC1L (ENSMFAG00000031624) #8 FTCD (ENSMFAG00000039806) #9 ENSMFAG00000060948 ##18 ENSMFAG00000003504 PCBP3 (ENSMFAG00000034574) #13 ENSMFAG00000053223 ENSMFAG00000056786 SLC19A1 (ENSMFAG00000041513) #14 ENSMFAG00000003616 #16 ADARB1 (ENSMFAG00000011312) #17 SLX9 (ENSMFAG00000037615) #19 ITGB2 (ENSMFAG00000036141) #20 PTTG1IP (ENSMFAG00000033191) #21 ENSMFAG00000032355 ##22 UBE2G2 (ENSMFAG00000057431) #23 TSPEAR (ENSMFAG00000001348) #24 KRTAP10-7 (ENSMFAG00000051280) ##30 KRTAP10-9 (ENSMFAG00000053657) #26 KRTAP10-4 (ENSMFAG00000031679) LRRC3 (ENSMFAG00000028969) #31 TRPM2 (ENSMFAG00000001773) #32 CFAP410 (ENSMFAG00000049270) #33 PFKL (ENSMFAG00000037062) #34 AIRE (ENSMFAG00000001488) #35 DNMT3L (ENSMFAG00000046145) #36 ICOSLG (ENSMFAG00000040533) #37 GATD3 (ENSMFAG00000046334) PWP2 (ENSMFAG00000044448) TRAPPC10 (ENSMFAG00000041704) Cercopithecinae_b ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.b.f ##22 Cercopithecinae_d ANCESTRAL SPECIES 188 ENSGT00950000182895.a.b.j.b.f ##22 ENSGT00940000156099 ENSGT00940000161034 ENSGT00940000161004 ENSGT00940000157316 ENSGT00940000158520 ENSGT00940000157937 ENSGT00910000148155 ENSGT00940000155195 ENSGT00390000006200 ENSGT00940000162420 ENSGT00390000001114 ENSGT00940000155117.f.a ENSGT00940000158746.b ENSGT00910000148101 ENSGT00940000163274.d Sooty mangabey MODERN SPECIES 167 ENSCATG00000036885 ENSCATG00000030122 ##22 BRINP3 (ENSCATG00000015477) RGS18 (ENSCATG00000036533) RGS21 (ENSCATG00000030362) RGS1 (ENSCATG00000031319) RGS13 (ENSCATG00000040203) RGS2 (ENSCATG00000037692) ENSCATG00000016891 UCHL5 (ENSCATG00000035323) RO60 (ENSCATG00000027732) GLRX2 (ENSCATG00000018043) B3GALT2 (ENSCATG00000015456) CDC73 (ENSCATG00000041073) ENSCATG00000039300 KCNT2 (ENSCATG00000036589) ENSCATG00000033803 Drill MODERN SPECIES 1156 ENSMLEG00000029614 ENSMLEG00000036410 ##22 BRINP3 (ENSMLEG00000035514) RGS18 (ENSMLEG00000033035) RGS21 (ENSMLEG00000033245) RGS1 (ENSMLEG00000034600) RGS13 (ENSMLEG00000042866) RGS2 (ENSMLEG00000031978) ENSMLEG00000027624 UCHL5 (ENSMLEG00000030039) RO60 (ENSMLEG00000040042) GLRX2 (ENSMLEG00000036985) CDC73 (ENSMLEG00000035219) B3GALT2 (ENSMLEG00000004708) Vervet Monkey DUPLICATION Vervet Monkey MODERN SPECIES 17 EDEM3 (ENSCSAG00000012843) NIBAN1 (ENSCSAG00000012855) RNF2 (ENSCSAG00000012868) TRMT1L (ENSCSAG00000012880) SWT1 (ENSCSAG00000012895) IVNS1ABP (ENSCSAG00000012909) ENSCSAG00000000246 HMCN1 (ENSCSAG00000013167) PRG4 (ENSCSAG00000013272) TPR (ENSCSAG00000013292) ODR4 (ENSCSAG00000013300) PDC (ENSCSAG00000013308) PTGS2 (ENSCSAG00000013318) PLA2G4A (ENSCSAG00000013326) ENSCSAG00000013330 ENSCSAG00000000247 #22 BRINP3 (ENSCSAG00000013346) RGS18 (ENSCSAG00000013348) RGS21 (ENSCSAG00000013355) RGS1 (ENSCSAG00000013361) RGS13 (ENSCSAG00000013367) RGS2 (ENSCSAG00000013370) ENSCSAG00000013381 UCHL5 (ENSCSAG00000013393) RO60 (ENSCSAG00000013402) GLRX2 (ENSCSAG00000013413) B3GALT2 (ENSCSAG00000000248) CDC73 (ENSCSAG00000013431) KCNT2 (ENSCSAG00000013529) CFH (ENSCSAG00000013551) CFHR4 (ENSCSAG00000013559) Vervet Monkey MODERN SPECIES 11 FTCD (ENSCSAG00000007233) #9 COL6A2 (ENSCSAG00000007240) #10 ENSCSAG00000007389 ENSCSAG00000007424 ENSCSAG00000007430 ENSCSAG00000007440 SLC19A1 (ENSCSAG00000007456) #14 ENSCSAG00000007471 POFUT2 (ENSCSAG00000007479) #16 ADARB1 (ENSCSAG00000007489) #17 ENSCSAG00000007491 ENSCSAG00000000274 SLX9 (ENSCSAG00000007496) #19 ITGB2 (ENSCSAG00000007501) #20 PTTG1IP (ENSCSAG00000007510) #21 ENSCSAG00000007518 #22 UBE2G2 (ENSCSAG00000007533) #23 ENSCSAG00000007540 ##25 KRTAP12-3 (ENSCSAG00000000275) ##25 KRTAP12-4 (ENSCSAG00000000276) KRTAP10-8 (ENSCSAG00000007546) #27 KRTAP10-4 (ENSCSAG00000007551) KRTAP10-3 (ENSCSAG00000007561) ##29 ENSCSAG00000007568 ##29 TSPEAR (ENSCSAG00000007591) #24 LRRC3 (ENSCSAG00000000277) #31 TRPM2 (ENSCSAG00000007727) #32 CFAP410 (ENSCSAG00000007805) #33 PFKL (ENSCSAG00000007817) #34 AIRE (ENSCSAG00000007836) #35 DNMT3L (ENSCSAG00000007863) #36 Rhinopithecus ANCESTRAL SPECIES 210 ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162768.B ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b #22 ENSGT00940000158193 #23 ENSGT00940000158579.l.a ##29 ENSGT00940000163258.j ##27 ENSGT00940000158579.l.b.b.b ##29 Golden snub-nosed monkey MODERN SPECIES 864 ITGB2 (ENSRROG00000044361) #20 PTTG1IP (ENSRROG00000039905) #21 ENSRROG00000029146 ENSRROG00000045338 #22 UBE2G2 (ENSRROG00000029493) #23 ENSRROG00000029984 ##26 ENSRROG00000014285 #25 ENSRROG00000039336 KRTAP10-10 (ENSRROG00000045098) #30 ENSRROG00000029893 ##27 KRTAP10-8 (ENSRROG00000030367) #27 ENSRROG00000039236 #28 ENSRROG00000036053 ##29 ENSRROG00000034471 #28 KRTAP10-3 (ENSRROG00000018457) ##29 TSPEAR (ENSRROG00000041561) #24 LRRC3 (ENSRROG00000033768) #31 TRPM2 (ENSRROG00000033191) #32 CFAP410 (ENSRROG00000045512) #33 Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 924 COL6A2 (ENSRBIG00000038516) #10 COL6A1 (ENSRBIG00000044937) #12 ENSRBIG00000028177 SLC19A1 (ENSRBIG00000042544) #14 COL18A1 (ENSRBIG00000030037) #15 POFUT2 (ENSRBIG00000037445) #16 ADARB1 (ENSRBIG00000033033) #17 SLX9 (ENSRBIG00000035044) #19 ITGB2 (ENSRBIG00000031250) #20 PTTG1IP (ENSRBIG00000036920) #21 SUMO3 (ENSRBIG00000031989) #22 UBE2G2 (ENSRBIG00000026486) #23 TSPEAR (ENSRBIG00000032685) #24 ENSRBIG00000018796 ##29 ENSRBIG00000030166 #25 ENSRBIG00000036000 ##29 ENSRBIG00000043765 ENSRBIG00000040008 ##29 ENSRBIG00000029901 #28 ENSRBIG00000039496 ##29 KRTAP10-2 (ENSRBIG00000029279) ##27 ENSRBIG00000013411 ##29 LRRC3 (ENSRBIG00000013619) #31 TRPM2 (ENSRBIG00000042457) #32 CFAP410 (ENSRBIG00000036434) #33 PFKL (ENSRBIG00000024591) #34 Black snub-nosed monkey MODERN SPECIES 2888 ENSRBIG00000033331 #22 Hominoidea ANCESTRAL SPECIES 26 ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT00390000018577 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b #22 ENSGT00950000182895.a.a.a.b.f ##22 ENSGT00940000158193 #23 ENSGT00940000158579.l.a ##29 ENSGT00940000163258.i.a.a ##27 ENSGT00940000163527.c.a #25 ENSGT00940000163527.d ##25 ENSGT00960000187213 ENSGT00940000165026 ENSGT00940000164049.b.a #26 ENSGT00940000163258.i.b #27 ENSGT00940000158579.l.b.a #28 ENSGT00940000163845.d #30 ENSGT00940000158579.l.b.b.a #29 ENSGT00940000163845.c ##30 ENSGT00940000163258.i.a.b ##27 Hominidae ANCESTRAL SPECIES 25 ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT00390000018577 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b #22 ENSGT00940000158193 #23 ENSGT00940000163258.i.a.a ##27 ENSGT00940000163527.c.a #25 ENSGT00940000163527.d ##25 ENSGT00960000187213 ENSGT00940000165026.b ENSGT00940000163845.d #30 ENSGT00940000164049.b.a #26 ENSGT00940000163258.i.b #27 ENSGT00940000163845.c ##30 ENSGT00940000164049.b.b ##26 ENSGT00940000158579.l.b.b.a.c #29 ENSGT00940000158579.l.b.a #28 ENSGT00940000163258.i.a.b ##27 ENSGT00940000158579.l.b.b.b ##29 Homo/Pan/Gorilla group ANCESTRAL SPECIES 27 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709.e.a #19 ENSGT00390000018577 ENSGT00390000015709.f #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b #22 ENSGT00940000158193 #23 ENSGT00940000163258.i.a.a ##27 ENSGT00940000163527.c.a #25 ENSGT00940000163527.d ##25 ENSGT00960000187213 ENSGT00940000165026.b ENSGT00940000164049.b.a #26 ENSGT00940000163258.i.b #27 ENSGT00940000158579.l.b.a #28 ENSGT00940000163845.d #30 ENSGT00940000164049.b.b ##26 ENSGT00940000158579.l.b.b.a.c #29 ENSGT00940000163845.c ##30 ENSGT00940000163258.i.a.b ##27 ENSGT00940000158579.l.b.b.b ##29 Homo/Pan group ANCESTRAL SPECIES 26 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709.e.a #19 ENSGT00390000018577 ENSGT00390000015709.f #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.b #22 ENSGT00940000158193 #23 ENSGT00940000163258.i.a.a ##27 ENSGT00940000163527.c.a #25 ENSGT00940000163527.d ##25 ENSGT00960000187213 ENSGT00940000165026.b ENSGT00940000163845.d #30 ENSGT00940000158579.l.b.a #28 ENSGT00940000164049.b.a #26 ENSGT00940000163258.i.b #27 ENSGT00940000163845.c ##30 ENSGT00940000164049.b.b ##26 ENSGT00940000158579.l.b.b.a.c #29 ENSGT00940000158579.l.a ##29 ENSGT00510000047718 #24 Human MODERN SPECIES 13 YBEY (ENSG00000182362) MCM3AP (ENSG00000160294) LSS (ENSG00000160285) SPATC1L (ENSG00000160284) #8 FTCD (ENSG00000160282) #9 COL6A2 (ENSG00000142173) #10 COL6A1 (ENSG00000142156) #12 PCBP3 (ENSG00000183570) #13 SLC19A1 (ENSG00000173638) #14 COL18A1 (ENSG00000182871) #15 POFUT2 (ENSG00000186866) #16 ADARB1 (ENSG00000197381) #17 SLX9 (ENSG00000160256) #19 ITGB2 (ENSG00000160255) #20 PTTG1IP (ENSG00000183255) #21 SUMO3 (ENSG00000184900) #22 UBE2G2 (ENSG00000184787) #23 KRTAP10-12 (ENSG00000189169) ##27 KRTAP12-1 (ENSG00000187175) #25 KRTAP12-2 (ENSG00000221864) #25 KRTAP12-3 (ENSG00000205439) ##25 KRTAP12-4 (ENSG00000212933) KRTAP10-11 (ENSG00000243489) KRTAP10-10 (ENSG00000221859) #30 KRTAP10-9 (ENSG00000221837) #26 KRTAP10-8 (ENSG00000187766) #27 KRTAP10-7 (ENSG00000272804) ##30 KRTAP10-6 (ENSG00000188155) ##26 KRTAP10-5 (ENSG00000241123) #29 KRTAP10-4 (ENSG00000215454) KRTAP10-3 (ENSG00000212935) ##29 Pan ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.b #22 Chimpanzee MODERN SPECIES OR2L5 (ENSPTRG00000046010) OR2L2 (ENSPTRG00000045276) OR2L3 (ENSPTRG00000050733) ENSPTRG00000030067 OR2L13 (ENSPTRG00000002215) ENSPTRG00000049161 OR2M5 (ENSPTRG00000046995) OR2M3 (ENSPTRG00000047719) OR2M4 (ENSPTRG00000002217) OR2M7 (ENSPTRG00000042776) OR14C36 (ENSPTRG00000002220) ENSPTRG00000049402 OR2T4 (ENSPTRG00000030061) OR2T6 (ENSPTRG00000030060) OR2G6 (ENSPTRG00000022806) ENSPTRG00000049162 #22 ENSPTRG00000023676 ENSPTRG00000029601 OR2T11 (ENSPTRG00000002223) OR14I1 (ENSPTRG00000023522) ENSPTRG00000048448 LYPD8 (ENSPTRG00000047488) SH3BP5L (ENSPTRG00000002224) ZNF672 (ENSPTRG00000002225) ZNF692 (ENSPTRG00000002226) PGBD2 (ENSPTRG00000002227) Bonobo MODERN SPECIES OR2L5 (ENSPPAG00000015628) OR2L2 (ENSPPAG00000034170) ENSPPAG00000007166 OR2L13 (ENSPPAG00000000427) ENSPPAG00000005253 OR2M3 (ENSPPAG00000017240) OR2M4 (ENSPPAG00000022132) OR2T12 (ENSPPAG00000030447) OR2M7 (ENSPPAG00000003964) ENSPPAG00000015154 OR2T4 (ENSPPAG00000009000) OR2T6 (ENSPPAG00000034554) OR2T1 (ENSPPAG00000008680) OR2T11 (ENSPPAG00000001140) ENSPPAG00000034158 ENSPPAG00000003421 #22 ENSPPAG00000035880 Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.a ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.a ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.a ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.a ##22 Cercopithecinae_b ANCESTRAL SPECIES 29 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.a.a ##22 ENSGT00940000158193 #23 ENSGT00940000163527.c.d #25 ENSGT00940000163527.d ##25 ENSGT00940000163527.c.c ##25 ENSGT00940000158579.l.b.b.b ##29 ENSGT00940000163258.i.b #27 ENSGT00940000163845.c ##30 ENSGT00940000158579.l.b.b.a.e #29 ENSGT00940000158579.l.b.b.a.f ##29 ENSGT00940000158579.l.b.a #28 ENSGT00940000158579.l.a ##29 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 Cercopithecinae_d ANCESTRAL SPECIES 36 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.a.a ##22 ENSGT00940000158193 #23 ENSGT00940000158579.l.a ##29 ENSGT00940000163527.c.d #25 ENSGT00940000163527.c.c ##25 ENSGT00940000158579.l.b.b.b ##29 ENSGT00940000163258.i.b #27 ENSGT00940000163845.c ##30 ENSGT00940000158579.l.b.b.a.e #29 ENSGT00940000158579.l.b.b.a.f ##29 ENSGT00940000158579.l.b.a #28 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 Drill MODERN SPECIES 1420 SLC19A1 (ENSMLEG00000032396) #14 COL18A1 (ENSMLEG00000042137) #15 POFUT2 (ENSMLEG00000039268) #16 ADARB1 (ENSMLEG00000033846) #17 SLX9 (ENSMLEG00000042676) #19 ITGB2 (ENSMLEG00000037129) #20 PTTG1IP (ENSMLEG00000033830) #21 ENSMLEG00000041321 ##22 UBE2G2 (ENSMLEG00000032164) #23 ENSMLEG00000006261 ##29 ENSMLEG00000033801 ENSMLEG00000038049 #25 ENSMLEG00000023838 ##25 ENSMLEG00000031813 ##29 KRTAP10-7 (ENSMLEG00000038502) ##30 ENSMLEG00000041386 #29 ENSMLEG00000038480 ##29 ENSMLEG00000034784 #28 TSPEAR (ENSMLEG00000035979) #24 ENSMLEG00000031061 ##27 ENSMLEG00000040298 ##26 LRRC3 (ENSMLEG00000001984) #31 TRPM2 (ENSMLEG00000009280) #32 Catarrhini ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.b ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.b ##22 Rhinopithecus ANCESTRAL SPECIES 24 ENSGT00390000007870 ENSGT00940000157800 ENSGT00940000165228 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902.c ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.j.a.b ##22 ENSGT00940000164037 ENSGT00510000055459 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00910000147493 ENSGT00940000158336 ENSGT00390000003582.e.c ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00390000013574 Golden snub-nosed monkey MODERN SPECIES 2632 SAP30BP (ENSRROG00000041616) RECQL5 (ENSRROG00000043301) SMIM6 (ENSRROG00000006702) SMIM5 (ENSRROG00000041071) MYO15B (ENSRROG00000044616) LLGL2 (ENSRROG00000044594) TSEN54 (ENSRROG00000030797) CASKIN2 (ENSRROG00000033523) TMEM94 (ENSRROG00000035918) GRB2 (ENSRROG00000040617) ENSRROG00000028519 MIF4GD (ENSRROG00000033599) MRPS7 (ENSRROG00000028554) GGA3 (ENSRROG00000034700) NUP85 (ENSRROG00000034070) ENSRROG00000033666 ##22 ENSRROG00000031610 ENSRROG00000030020 NT5C (ENSRROG00000033470) ARMC7 (ENSRROG00000014155) SLC16A5 (ENSRROG00000045514) KCTD2 (ENSRROG00000044059) ATP5PD (ENSRROG00000041340) ENSRROG00000010716 CDR2L (ENSRROG00000043209) HID1 (ENSRROG00000029110) OTOP3 (ENSRROG00000033489) OTOP2 (ENSRROG00000026399) USH1G (ENSRROG00000031837) FDXR (ENSRROG00000041952) GRIN2C (ENSRROG00000039210) Cercopithecinae ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.b ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.b ##22 Cercopithecinae_b ANCESTRAL SPECIES 19 ENSGT00390000007870 ENSGT00940000157800 ENSGT00940000165228 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.j.a.b ##22 ENSGT00950000182895.a.a.a.a.a.a.a ##22 ENSGT00940000164037 ENSGT00510000055459 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000158336.y ENSGT00390000003582.e.c.c.a.b ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00950000182990.b Cercopithecinae_d ANCESTRAL SPECIES 15 ENSGT00390000007870 ENSGT00940000157800 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT01100000263915.D ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.j.a.b ##22 ENSGT00950000182895.a.a.a.a.a.a.a ##22 ENSGT00940000164037 ENSGT00510000055459 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000158336.y ENSGT00390000003582.e.c.c.a.b ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00950000182990.b Drill MODERN SPECIES 65 SAP30BP (ENSMLEG00000029210) SMIM5 (ENSMLEG00000030911) RECQL5 (ENSMLEG00000033070) ENSMLEG00000043467 LLGL2 (ENSMLEG00000038952) TSEN54 (ENSMLEG00000044168) CASKIN2 (ENSMLEG00000028492) TMEM94 (ENSMLEG00000040372) GRB2 (ENSMLEG00000033030) ENSMLEG00000024923 SLC25A19 (ENSMLEG00000040542) MIF4GD (ENSMLEG00000031604) MRPS7 (ENSMLEG00000032202) GGA3 (ENSMLEG00000040759) NUP85 (ENSMLEG00000036306) ENSMLEG00000032713 ##22 ENSMLEG00000037373 ENSMLEG00000028530 NT5C (ENSMLEG00000032500) SLC16A5 (ENSMLEG00000029978) ENSMLEG00000043153 ENSMLEG00000029365 ENSMLEG00000026116 CDR2L (ENSMLEG00000039727) HID1 (ENSMLEG00000034321) OTOP3 (ENSMLEG00000031468) OTOP2 (ENSMLEG00000032852) USH1G (ENSMLEG00000031673) ENSMLEG00000043118 FDXR (ENSMLEG00000042243) GRIN2C (ENSMLEG00000037748) Hominoidea ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.b ##22 Hominidae ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.a.b ##22 Orangutan MODERN SPECIES 12 MCM3AP (ENSPPYG00000011532) LSS (ENSPPYG00000011530) SPATC1L (ENSPPYG00000011529) #8 FTCD (ENSPPYG00000011528) #9 COL6A2 (ENSPPYG00000011527) #10 COL6A1 (ENSPPYG00000034634) #12 PCBP3 (ENSPPYG00000011525) #13 SLC19A1 (ENSPPYG00000011523) #14 ENSPPYG00000011521 #15 POFUT2 (ENSPPYG00000011516) #16 ADARB1 (ENSPPYG00000011514) #17 SLX9 (ENSPPYG00000011509) #19 ENSPPYG00000031942 ITGB2 (ENSPPYG00000011506) #20 PTTG1IP (ENSPPYG00000036754) #21 ENSPPYG00000011503 ##22 UBE2G2 (ENSPPYG00000035359) #23 KRTAP10-12 (ENSPPYG00000011501) ##27 ENSPPYG00000033473 KRTAP12-3 (ENSPPYG00000011499) ##25 KRTAP10-11 (ENSPPYG00000011497) KRTAP10-10 (ENSPPYG00000011496) #30 KRTAP10-9 (ENSPPYG00000011495) #26 KRTAP10-8 (ENSPPYG00000011494) #27 KRTAP10-7 (ENSPPYG00000011493) ##30 ENSPPYG00000038597 ##26 KRTAP10-5 (ENSPPYG00000011492) #29 ENSPPYG00000039780 #28 KRTAP10-3 (ENSPPYG00000037806) ##29 TSPEAR (ENSPPYG00000011488) #24 LRRC3 (ENSPPYG00000011486) #31 Platyrrhini ANCESTRAL SPECIES 31 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000158579.l.b.b.a.a.b #29 ENSGT00940000158579.l.b.a #28 ENSGT00940000163845.d #30 ENSGT00510000047718 #24 ENSGT00940000158579.l.b.b.a.b #29 ENSGT00940000163845.c ##30 ENSGT00940000163258.i.b #27 ENSGT00940000158579.l.a ##29 ENSGT00940000158579.k ##29 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 Cebidae ANCESTRAL SPECIES 32 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000158579.l.b.b.a.a.b #29 ENSGT00940000158579.l.b.a #28 ENSGT00510000047718 #24 ENSGT00940000158579.l.b.b.a.b #29 ENSGT00940000163845.c ##30 ENSGT00940000163258.i.b #27 ENSGT00940000158579.l.a ##29 ENSGT00940000158579.k ##29 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 Marmoset MODERN SPECIES 13 LSS (ENSCJAG00000086602) SPATC1L (ENSCJAG00000085076) #8 FTCD (ENSCJAG00000080609) #9 COL6A2 (ENSCJAG00000001863) #10 COL6A1 (ENSCJAG00000078346) #12 PCBP3 (ENSCJAG00000077507) #13 SLC19A1 (ENSCJAG00000001943) #14 ENSCJAG00000081985 COL18A1 (ENSCJAG00000083421) #15 ENSCJAG00000081850 #16 ADARB1 (ENSCJAG00000018646) #17 ENSCJAG00000071675 SLX9 (ENSCJAG00000010599) #19 ITGB2 (ENSCJAG00000010554) #20 PTTG1IP (ENSCJAG00000085899) #21 SUMO3 (ENSCJAG00000010529) #22 UBE2G2 (ENSCJAG00000041224) #23 ENSCJAG00000063198 ##30 ENSCJAG00000000301 ##26 ENSCJAG00000000296 #29 ENSCJAG00000052337 #28 ENSCJAG00000047635 ENSCJAG00000041374 KRTAP10-3 (ENSCJAG00000077838) ##29 ENSCJAG00000046358 #28 TSPEAR (ENSCJAG00000015329) #24 LRRC3 (ENSCJAG00000081918) #31 TRPM2 (ENSCJAG00000073600) #32 CFAP410 (ENSCJAG00000017611) #33 PFKL (ENSCJAG00000017630) #34 AIRE (ENSCJAG00000013748) #35 Cebidae_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.j #22 Bolivian squirrel monkey MODERN SPECIES 57 SLC38A9 (ENSSBOG00000026976) PLPP1 (ENSSBOG00000021185) MTREX (ENSSBOG00000026693) DHX29 (ENSSBOG00000026450) CCNO (ENSSBOG00000024858) MCIDAS (ENSSBOG00000027678) CDC20B (ENSSBOG00000021532) GPX8 (ENSSBOG00000033612) GZMA (ENSSBOG00000031268) ENSSBOG00000032720 GZMK (ENSSBOG00000023762) ESM1 (ENSSBOG00000026605) SNX18 (ENSSBOG00000021385) HSPB3 (ENSSBOG00000019511) ARL15 (ENSSBOG00000031209) ENSSBOG00000035211 #22 ENSSBOG00000035792 NDUFS4 (ENSSBOG00000014595) ENSSBOG00000020828 FST (ENSSBOG00000024064) ENSSBOG00000012144 MOCS2 (ENSSBOG00000023924) ITGA2 (ENSSBOG00000026323) ITGA1 (ENSSBOG00000035784) ENSSBOG00000005354 PELO (ENSSBOG00000036140) ISL1 (ENSSBOG00000029572) PARP8 (ENSSBOG00000026196) ENSSBOG00000022889 EMB (ENSSBOG00000031770) HCN1 (ENSSBOG00000032652) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1115 AKT3 (ENSANAG00000031454) ZBTB18 (ENSANAG00000037877) C1orf100 (ENSANAG00000029438) ENSANAG00000033603 CATSPERE (ENSANAG00000038006) DESI2 (ENSANAG00000036524) ENSANAG00000028263 ENSANAG00000029422 ENSANAG00000033895 EFCAB2 (ENSANAG00000033282) KIF26B (ENSANAG00000030464) SMYD3 (ENSANAG00000032109) ENSANAG00000037652 TFB2M (ENSANAG00000038040) CNST (ENSANAG00000022435) ENSANAG00000035995 #22 SCCPDH (ENSANAG00000017200) AHCTF1 (ENSANAG00000027717) Mas night monkey MODERN SPECIES 1376 ENSANAG00000034097 #14 COL18A1 (ENSANAG00000036428) #15 POFUT2 (ENSANAG00000022544) #16 ADARB1 (ENSANAG00000023685) #17 SLX9 (ENSANAG00000031930) #19 ITGB2 (ENSANAG00000032805) #20 PTTG1IP (ENSANAG00000031724) #21 ENSANAG00000032700 #22 UBE2G2 (ENSANAG00000035084) #23 ENSANAG00000030182 ##29 ENSANAG00000030273 #29 KRTAP12-3 (ENSANAG00000026810) ##25 ENSANAG00000027010 ENSANAG00000027667 ##26 ENSANAG00000028487 #28 ENSANAG00000032475 #30 TSPEAR (ENSANAG00000032724) #24 TRPM2 (ENSANAG00000034661) #32 CFAP410 (ENSANAG00000021390) #33 PFKL (ENSANAG00000022126) #34 AIRE (ENSANAG00000031045) #35 DNMT3L (ENSANAG00000027897) #36 ENSANAG00000031721 #37 Tarsier MODERN SPECIES 7124 LLGL2 (ENSTSYG00000027056) TSEN54 (ENSTSYG00000037439) CASKIN2 (ENSTSYG00000026592) TMEM94 (ENSTSYG00000033397) GRB2 (ENSTSYG00000031708) SLC25A19 (ENSTSYG00000010346) MIF4GD (ENSTSYG00000025585) MRPS7 (ENSTSYG00000009380) GGA3 (ENSTSYG00000010581) NUP85 (ENSTSYG00000010481) ENSTSYG00000035255 #22 ENSTSYG00000003938 ENSTSYG00000030661 ARMC7 (ENSTSYG00000012602) SLC16A5 (ENSTSYG00000027596) ENSTSYG00000034337 ATP5H (ENSTSYG00000030194) MRPL58 (ENSTSYG00000013235) CDR2L (ENSTSYG00000029560) HID1 (ENSTSYG00000025635) OTOP3 (ENSTSYG00000037315) OTOP2 (ENSTSYG00000036808) USH1G (ENSTSYG00000026004) FADS6 (ENSTSYG00000000345) FDXR (ENSTSYG00000026975) Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163845 #30 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000163441.f.a.a.a ENSGT00940000163258 #27 ENSGT00940000158579 #29 ENSGT00940000163527 #25 ENSGT00940000164049 #26 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 Bushbaby MODERN SPECIES 243 FTCD (ENSOGAG00000008226) #9 COL6A2 (ENSOGAG00000005077) #10 COL6A1 (ENSOGAG00000031247) #12 ENSOGAG00000024419 ENSOGAG00000008044 SLC19A1 (ENSOGAG00000032361) #14 COL18A1 (ENSOGAG00000000892) #15 ENSOGAG00000024946 POFUT2 (ENSOGAG00000017168) #16 ADARB1 (ENSOGAG00000017167) #17 ENSOGAG00000026126 ENSOGAG00000027833 SLX9 (ENSOGAG00000009641) #19 ITGB2 (ENSOGAG00000009633) #20 PTTG1IP (ENSOGAG00000005597) #21 SUMO3 (ENSOGAG00000004715) #22 ENSOGAG00000012063 #23 ENSOGAG00000033488 #30 ENSOGAG00000034456 #29 TSPEAR (ENSOGAG00000003682) #24 LRRC3 (ENSOGAG00000013776) #31 TRPM2 (ENSOGAG00000014398) #32 CFAP410 (ENSOGAG00000003170) #33 PFKL (ENSOGAG00000027753) #34 AIRE (ENSOGAG00000010769) #35 DNMT3L (ENSOGAG00000015368) #36 ICOSLG (ENSOGAG00000015366) #37 GATD3 (ENSOGAG00000012480) PWP2 (ENSOGAG00000012473) TRAPPC10 (ENSOGAG00000012463) AGPAT3 (ENSOGAG00000003775) Lemuriformes ANCESTRAL SPECIES 88 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 24 YBEY (ENSMICG00000000809) MCM3AP (ENSMICG00000000801) LSS (ENSMICG00000004051) SPATC1L (ENSMICG00000027207) #8 FTCD (ENSMICG00000002458) #9 COL6A2 (ENSMICG00000033173) #10 ENSMICG00000033569 PCBP3 (ENSMICG00000012679) #13 SLC19A1 (ENSMICG00000035898) #14 COL18A1 (ENSMICG00000037125) #15 POFUT2 (ENSMICG00000035479) #16 ADARB1 (ENSMICG00000008433) #17 SLX9 (ENSMICG00000047718) #19 ITGB2 (ENSMICG00000002984) #20 PTTG1IP (ENSMICG00000028388) #21 SUMO3 (ENSMICG00000036688) #22 UBE2G2 (ENSMICG00000013001) #23 TFF2 (ENSMICG00000011183) TFF1 (ENSMICG00000045652) TMPRSS3 (ENSMICG00000005497) UBASH3A (ENSMICG00000000050) RSPH1 (ENSMICG00000000051) SLC37A1 (ENSMICG00000000053) PDE9A (ENSMICG00000016258) WDR4 (ENSMICG00000042106) NDUFV3 (ENSMICG00000046617) PKNOX1 (ENSMICG00000037878) CBS (ENSMICG00000041663) U2AF1 (ENSMICG00000013835) CRYAA (ENSMICG00000035380) ENSMICG00000035845 Mouse lemur MODERN SPECIES 30 TSN (ENSMICG00000015793) NIFK (ENSMICG00000037600) CLASP1 (ENSMICG00000007186) TFCP2L1 (ENSMICG00000007161) ENSMICG00000032165 ENSMICG00000033908 GLI2 (ENSMICG00000008885) INHBB (ENSMICG00000047510) RALB (ENSMICG00000012197) ENSMICG00000042089 ENSMICG00000009529 EPB41L5 (ENSMICG00000000936) PTPN4 (ENSMICG00000046058) ENSMICG00000017224 ENSMICG00000034038 ENSMICG00000011011 #22 CFAP221 (ENSMICG00000017212) SCTR (ENSMICG00000000297) TMEM37 (ENSMICG00000000295) DBI (ENSMICG00000026878) C2orf76 (ENSMICG00000037028) ENSMICG00000000288 ENSMICG00000033839 ENSMICG00000017595 EN1 (ENSMICG00000042501) INSIG2 (ENSMICG00000046615) CCDC93 (ENSMICG00000017592) ENSMICG00000017591 ENSMICG00000047072 ENSMICG00000039700 DPP10 (ENSMICG00000032720) Lemuriformes_a ANCESTRAL SPECIES 181 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b.s #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 768 ENSPCOG00000021907 ENSPCOG00000018632 #22 C9orf153 (ENSPCOG00000020594) ISCA1 (ENSPCOG00000021277) TUT7 (ENSPCOG00000023407) GAS1 (ENSPCOG00000025804) DAPK1 (ENSPCOG00000015755) ENSPCOG00000017521 FBP2 (ENSPCOG00000006489) CTSL (ENSPCOG00000020524) Coquerels sifaka MODERN SPECIES 134 NANS (ENSPCOG00000023626) TRIM14 (ENSPCOG00000017721) CORO2A (ENSPCOG00000021539) TBC1D2 (ENSPCOG00000024947) GABBR2 (ENSPCOG00000019740) ANKS6 (ENSPCOG00000019218) GALNT12 (ENSPCOG00000022046) COL15A1 (ENSPCOG00000007449) TGFBR1 (ENSPCOG00000021241) ALG2 (ENSPCOG00000014203) SEC61B (ENSPCOG00000021383) NR4A3 (ENSPCOG00000012688) STX17 (ENSPCOG00000019872) ERP44 (ENSPCOG00000027107) INVS (ENSPCOG00000024587) ENSPCOG00000022135 #22 TEX10 (ENSPCOG00000026793) MSANTD3 (ENSPCOG00000028663) TMEFF1 (ENSPCOG00000014294) CAVIN4 (ENSPCOG00000012594) ENSPCOG00000012244 ENSPCOG00000028150 PLPPR1 (ENSPCOG00000005256) BAAT (ENSPCOG00000015820) ZNF189 (ENSPCOG00000016670) ALDOB (ENSPCOG00000026694) PGAP4 (ENSPCOG00000014025) RNF20 (ENSPCOG00000026072) GRIN3A (ENSPCOG00000008500) Coquerels sifaka MODERN SPECIES 543 YBEY (ENSPCOG00000015606) MCM3AP (ENSPCOG00000024498) LSS (ENSPCOG00000019936) SPATC1L (ENSPCOG00000025023) #8 FTCD (ENSPCOG00000021020) #9 COL6A2 (ENSPCOG00000016356) #10 COL6A1 (ENSPCOG00000014806) #12 PCBP3 (ENSPCOG00000013797) #13 SLC19A1 (ENSPCOG00000027927) #14 COL18A1 (ENSPCOG00000014698) #15 POFUT2 (ENSPCOG00000016074) #16 ADARB1 (ENSPCOG00000020406) #17 SLX9 (ENSPCOG00000020078) #19 ITGB2 (ENSPCOG00000014923) #20 PTTG1IP (ENSPCOG00000020581) #21 ENSPCOG00000019098 #22 UBE2G2 (ENSPCOG00000026083) #23 ENSPCOG00000013309 #27 Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 1314 ENSPSMG00000004175 #21 ENSPSMG00000004149 #22 UBE2G2 (ENSPSMG00000004073) #23 ENSPSMG00000004065 Greater bamboo lemur MODERN SPECIES 1310 ENSPSMG00000003996 #22 Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 ENSGT00940000163258 #27 ENSGT00940000163845 #30 ENSGT00940000158579 #29 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 Tree shrew MODERN SPECIES 6630 ENSTBEG00000007131 #22 Glires ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 ENSGT00940000163845 #30 ENSGT00940000158579 #29 ENSGT00940000163441.f.a.a.a ENSGT00940000163258 #27 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a Rodentia ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Rodentia_A ANCESTRAL SPECIES 5 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Sciuridae ANCESTRAL SPECIES 12 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989.h #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 14 IDO2 (ENSSVLG00005021403) IDO1 (ENSSVLG00005021549) ADAM18 (ENSSVLG00005021659) ENSSVLG00005021965 ENSSVLG00005022023 ADAM32 (ENSSVLG00005022276) ENSSVLG00005022608 ADAM9 (ENSSVLG00005010866) TM2D2 (ENSSVLG00005011108) HTRA4 (ENSSVLG00005011148) PLEKHA2 (ENSSVLG00005011303) TACC1 (ENSSVLG00005011491) FGFR1 (ENSSVLG00005011874) LETM2 (ENSSVLG00005012521) NSD3 (ENSSVLG00005013101) ENSSVLG00005013154 #22 PLPP5 (ENSSVLG00005013468) DDHD2 (ENSSVLG00005013607) BAG4 (ENSSVLG00005013686) LSM1 (ENSSVLG00005013791) STAR (ENSSVLG00005013903) ASH2L (ENSSVLG00005014040) EIF4EBP1 (ENSSVLG00005014183) ENSSVLG00005014228 ADRB3 (ENSSVLG00005014273) GOT1L1 (ENSSVLG00005014325) ENSSVLG00005014501 BRF2 (ENSSVLG00005014567) ADGRA2 (ENSSVLG00005014696) ENSSVLG00005014866 ENSSVLG00005014990 Eurasian red squirrel MODERN SPECIES 1 YBEY (ENSSVLG00005018192) MCM3AP (ENSSVLG00005018327) LSS (ENSSVLG00005018385) SPATC1L (ENSSVLG00005019009) #8 ENSSVLG00005019107 #9 ENSSVLG00005019331 #9 COL6A2 (ENSSVLG00005019580) #10 COL6A1 (ENSSVLG00005019712) #12 PCBP3 (ENSSVLG00005019852) #13 SLC19A1 (ENSSVLG00005020132) #14 POFUT2 (ENSSVLG00005021705) #16 ADARB1 (ENSSVLG00005021761) #17 SLX9 (ENSSVLG00005021933) #19 ITGB2 (ENSSVLG00005022020) #20 ENSSVLG00005022355 #21 ENSSVLG00005022452 #22 UBE2G2 (ENSSVLG00005022482) #23 TSPEAR (ENSSVLG00005022529) #24 ENSSVLG00005022624 #29 ENSSVLG00005022707 #29 ENSSVLG00005023080 #30 ENSSVLG00005023369 #27 LRRC3 (ENSSVLG00005023556) #31 TRPM2 (ENSSVLG00005023598) #32 CFAP410 (ENSSVLG00005023882) #33 PFKL (ENSSVLG00005023925) #34 AIRE (ENSSVLG00005023997) #35 ENSSVLG00005024326 #36 ICOSLG (ENSSVLG00005024369) #37 GATD3 (ENSSVLG00005024474) PWP2 (ENSSVLG00005024557) Marmotini DUPLICATION Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES 36 ENSGT00390000007870 ENSGT00940000165228 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.j.n.a #22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000162951 ENSGT00940000158336 ENSGT00390000003582.e ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00950000182990.b ENSGT00390000013574 Marmotini_b ANCESTRAL SPECIES 182 ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000163601 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989.h #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.n.a #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 Squirrel DUPLICATION Squirrel MODERN SPECIES 378 YBEY (ENSSTOG00000029373) MCM3AP (ENSSTOG00000007531) LSS (ENSSTOG00000007503) SPATC1L (ENSSTOG00000026388) #8 FTCD (ENSSTOG00000020132) #9 COL6A2 (ENSSTOG00000024366) #10 ENSSTOG00000022346 PCBP3 (ENSSTOG00000007178) #13 SLC19A1 (ENSSTOG00000007113) #14 ENSSTOG00000027467 #15 POFUT2 (ENSSTOG00000028617) #16 ADARB1 (ENSSTOG00000015792) #17 SLX9 (ENSSTOG00000028031) #19 ITGB2 (ENSSTOG00000001412) #20 PTTG1IP (ENSSTOG00000021779) #21 ENSSTOG00000010587 #22 UBE2G2 (ENSSTOG00000007968) #23 TSPEAR (ENSSTOG00000022950) #24 ENSSTOG00000029592 ENSSTOG00000031377 ENSSTOG00000032824 ENSSTOG00000020703 #29 ENSSTOG00000020813 ENSSTOG00000030499 #29 ENSSTOG00000034349 ENSSTOG00000009410 Squirrel MODERN SPECIES 194 ENSSTOG00000033976 SMIM5 (ENSSTOG00000022610) RECQL5 (ENSSTOG00000012970) ENSSTOG00000030239 ENSSTOG00000021155 LLGL2 (ENSSTOG00000012891) TSEN54 (ENSSTOG00000012883) CASKIN2 (ENSSTOG00000021787) TMEM94 (ENSSTOG00000012842) GRB2 (ENSSTOG00000012661) ENSSTOG00000015212 MIF4GD (ENSSTOG00000022390) MRPS7 (ENSSTOG00000015200) GGA3 (ENSSTOG00000015187) NUP85 (ENSSTOG00000015175) ENSSTOG00000024685 #22 JPT1 (ENSSTOG00000015171) NT5C (ENSSTOG00000015167) ARMC7 (ENSSTOG00000015164) SLC16A5 (ENSSTOG00000015159) ENSSTOG00000019549 ATP5PD (ENSSTOG00000015154) MRPL58 (ENSSTOG00000015149) CDR2L (ENSSTOG00000023575) KCTD2 (ENSSTOG00000015158) HID1 (ENSSTOG00000015130) OTOP3 (ENSSTOG00000021608) OTOP2 (ENSSTOG00000025566) USH1G (ENSSTOG00000021597) FADS6 (ENSSTOG00000009655) FDXR (ENSSTOG00000009639) Marmotini ANCESTRAL SPECIES 21 ENSGT00410000025698.a ENSGT00390000011270 ENSGT00390000001960 ENSGT00940000157390 ENSGT00940000159171 ENSGT00940000159967 ENSGT00550000074815 ENSGT00940000157359 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000157560.e ENSGT00390000004585 ENSGT00940000159665 ENSGT00940000162410 ENSGT00950000183093.C ENSGT00950000182895.a.b.j.n.b #22 ENSGT00940000157671 ENSGT00520000058292 ENSGT00940000161139 ENSGT00390000011405 ENSGT00950000182767.a.a ENSGT00390000016465 ENSGT00390000006681.c ENSGT00940000157407 ENSGT00940000162464 ENSGT00940000160410 ENSGT00740000115684 ENSGT00940000160090 ENSGT00940000170327 ENSGT00940000154784.D.a.b ENSGT00940000153463.b Marmotini_b ANCESTRAL SPECIES 160 ENSGT00410000025698.a ENSGT00390000011270 ENSGT00390000001960 ENSGT00940000157390 ENSGT00940000159171 ENSGT00940000159967 ENSGT00550000074815 ENSGT00940000157359 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000157560.e ENSGT00390000004585 ENSGT00940000159665 ENSGT00940000162410 ENSGT00950000183093.C ENSGT00950000182895.a.b.j.n.b #22 ENSGT00940000157671 ENSGT00520000058292 ENSGT00940000161139 ENSGT00390000011405 Arctic ground squirrel MODERN SPECIES 54 GPATCH2 (ENSUPAG00010009619) SPATA17 (ENSUPAG00010009658) RRP15 (ENSUPAG00010009681) TGFB2 (ENSUPAG00010009688) LYPLAL1 (ENSUPAG00010009729) SLC30A10 (ENSUPAG00010009741) EPRS1 (ENSUPAG00010009749) BPNT1 (ENSUPAG00010009777) IARS2 (ENSUPAG00010009798) RAB3GAP2 (ENSUPAG00010009831) MARK1 (ENSUPAG00010009891) C1orf115 (ENSUPAG00010009923) MTARC2 (ENSUPAG00010009928) MTARC1 (ENSUPAG00010009939) HLX (ENSUPAG00010009960) ENSUPAG00010009975 #22 DUSP10 (ENSUPAG00010009979) ENSUPAG00010009984 HHIPL2 (ENSUPAG00010009987) ENSUPAG00010010009 Squirrel MODERN SPECIES 250 ENSSTOG00000030930 DNAH6 (ENSSTOG00000028220) SUCLG1 (ENSSTOG00000016550) LYPLAL1 (ENSSTOG00000025167) SLC30A10 (ENSSTOG00000003770) EPRS1 (ENSSTOG00000011870) BPNT1 (ENSSTOG00000005861) IARS2 (ENSSTOG00000005879) RAB3GAP2 (ENSSTOG00000020278) ENSSTOG00000004797 MARK1 (ENSSTOG00000004930) C1orf115 (ENSSTOG00000029139) MTARC2 (ENSSTOG00000006676) MTARC1 (ENSSTOG00000006692) HLX (ENSSTOG00000006326) ENSSTOG00000030827 #22 DUSP10 (ENSSTOG00000011662) HHIPL2 (ENSSTOG00000007102) Alpin marmot MODERN SPECIES 12 TGFB2 (ENSMMMG00000024197) LYPLAL1 (ENSMMMG00000024196) SLC30A10 (ENSMMMG00000024195) EPRS1 (ENSMMMG00000024193) BPNT1 (ENSMMMG00000024192) ENSMMMG00000024191 IARS2 (ENSMMMG00000024190) RAB3GAP2 (ENSMMMG00000024188) ENSMMMG00000024187 MARK1 (ENSMMMG00000024186) C1orf115 (ENSMMMG00000024185) MTARC2 (ENSMMMG00000024184) MTARC1 (ENSMMMG00000024183) HLX (ENSMMMG00000024182) ENSMMMG00000024180 ENSMMMG00000024179 #22 DUSP10 (ENSMMMG00000024177) ENSMMMG00000024176 TAF1A (ENSMMMG00000024175) MIA3 (ENSMMMG00000024174) ENSMMMG00000024173 ENSMMMG00000024172 ENSMMMG00000024171 ENSMMMG00000024170 DISP1 (ENSMMMG00000024169) TLR5 (ENSMMMG00000024168) SUSD4 (ENSMMMG00000024167) CCDC185 (ENSMMMG00000024166) CAPN8 (ENSMMMG00000024165) ENSMMMG00000024163 CAPN2 (ENSMMMG00000024162) Marmotini ANCESTRAL SPECIES 13 ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000163601 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989.h #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j.o #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826.lb Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 90 SAP30BP (ENSMMMG00000010396) RECQL5 (ENSMMMG00000010416) ENSMMMG00000010454 SMIM5 (ENSMMMG00000010460) ENSMMMG00000010467 LLGL2 (ENSMMMG00000010530) ENSMMMG00000010600 CASKIN2 (ENSMMMG00000010618) TMEM94 (ENSMMMG00000010651) GRB2 (ENSMMMG00000010717) SLC25A19 (ENSMMMG00000010758) MIF4GD (ENSMMMG00000010800) MRPS7 (ENSMMMG00000010811) GGA3 (ENSMMMG00000010824) NUP85 (ENSMMMG00000010923) ENSMMMG00000010977 #22 JPT1 (ENSMMMG00000011009) NT5C (ENSMMMG00000011020) ARMC7 (ENSMMMG00000011039) SLC16A5 (ENSMMMG00000011051) ENSMMMG00000011073 ENSMMMG00000011080 ATP5PD (ENSMMMG00000011085) MRPL58 (ENSMMMG00000011103) CDR2L (ENSMMMG00000011134) HID1 (ENSMMMG00000011148) OTOP3 (ENSMMMG00000011211) OTOP2 (ENSMMMG00000011228) USH1G (ENSMMMG00000011236) FADS6 (ENSMMMG00000011248) FDXR (ENSMMMG00000011264) Alpin marmot MODERN SPECIES 4 MCM3AP (ENSMMMG00000013170) LSS (ENSMMMG00000013141) SPATC1L (ENSMMMG00000013131) #8 FTCD (ENSMMMG00000013068) #9 ENSMMMG00000013067 #10 COL6A2 (ENSMMMG00000013048) #10 ENSMMMG00000013027 PCBP3 (ENSMMMG00000012976) #13 SLC19A1 (ENSMMMG00000012919) #14 ENSMMMG00000012904 #15 POFUT2 (ENSMMMG00000012809) #16 ADARB1 (ENSMMMG00000012767) #17 SLX9 (ENSMMMG00000012725) #19 ITGB2 (ENSMMMG00000012709) #20 ENSMMMG00000012708 #21 SUMO3 (ENSMMMG00000012686) #22 ENSMMMG00000012676 UBE2G2 (ENSMMMG00000012664) #23 ENSMMMG00000012657 ENSMMMG00000012650 ENSMMMG00000012640 #27 TSPEAR (ENSMMMG00000012623) #24 LRRC3 (ENSMMMG00000012614) #31 TRPM2 (ENSMMMG00000012573) #32 CFAP410 (ENSMMMG00000012554) #33 ENSMMMG00000012488 #34 AIRE (ENSMMMG00000012367) #35 ENSMMMG00000012363 #36 ICOSLG (ENSMMMG00000012361) #37 GATD3 (ENSMMMG00000012356) PWP2 (ENSMMMG00000011468) Marmotini_b ANCESTRAL SPECIES ENSGT00950000182895.a.b.j.o #22 Squirrel MODERN SPECIES 605 ENSSTOG00000008319 #22 Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 329 IPO4 (ENSUPAG00010009601) REC8 (ENSUPAG00010009635) ENSUPAG00010009650 RNF31 (ENSUPAG00010009656) PSME2 (ENSUPAG00010009682) EMC9 (ENSUPAG00010009721) PSME1 (ENSUPAG00010009735) FITM1 (ENSUPAG00010009801) DCAF11 (ENSUPAG00010009807) PCK2 (ENSUPAG00010009905) NRL (ENSUPAG00010009985) CPNE6 (ENSUPAG00010009996) CARMIL3 (ENSUPAG00010010070) ENSUPAG00010010123 DHRS2 (ENSUPAG00010010137) ENSUPAG00010010483 #22 ENSUPAG00010010485 JPH4 (ENSUPAG00010010533) AP1G2 (ENSUPAG00010010537) THTPA (ENSUPAG00010010569) ZFHX2 (ENSUPAG00010010574) NGDN (ENSUPAG00010010585) MYH6 (ENSUPAG00010010620) CMTM5 (ENSUPAG00010010806) IL25 (ENSUPAG00010010826) EFS (ENSUPAG00010010832) SLC22A17 (ENSUPAG00010010867) PABPN1 (ENSUPAG00010010902) BCL2L2 (ENSUPAG00010010908) PPP1R3E (ENSUPAG00010010914) HOMEZ (ENSUPAG00010010920) Arctic ground squirrel MODERN SPECIES 924 SUMO3 (ENSUPAG00010023954) #22 UBE2G2 (ENSUPAG00010023952) #23 ENSUPAG00010023949 #30 ENSUPAG00010023947 #30 Hystricomorpha ANCESTRAL SPECIES 60 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 ENSGT00510000047718 #24 ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 #37 ENSGT00940000162228 #36 ENSGT00940000161104 #35 ENSGT00940000159292 #34 ENSGT00390000018807 #33 Naked mole-rat female MODERN SPECIES 11 ENSHGLG00000012528 LSS (ENSHGLG00000008767) SPATC1L (ENSHGLG00000013076) #8 FTCD (ENSHGLG00000048038) #9 COL6A2 (ENSHGLG00000009116) #10 COL6A1 (ENSHGLG00000017878) #12 PCBP3 (ENSHGLG00000018620) #13 SLC19A1 (ENSHGLG00000013143) #14 ENSHGLG00000018308 #15 POFUT2 (ENSHGLG00000041783) #16 ADARB1 (ENSHGLG00000005906) #17 SLX9 (ENSHGLG00000045493) #19 ITGB2 (ENSHGLG00000013472) #20 ENSHGLG00000049629 PTTG1IP (ENSHGLG00000033185) #21 ENSHGLG00000037860 #22 ENSHGLG00000009258 #23 ENSHGLG00000014199 #24 ENSHGLG00000005505 ENSHGLG00000043957 ENSHGLG00000038544 ENSHGLG00000007283 #27 ENSHGLG00000015985 ENSHGLG00000046004 CSTB (ENSHGLG00000047009) RRP1 (ENSHGLG00000050109) AGPAT3 (ENSHGLG00000048529) TRAPPC10 (ENSHGLG00000013176) PWP2 (ENSHGLG00000017401) ENSHGLG00000018104 ENSHGLG00000013877 #37 Hystricomorpha_a ANCESTRAL SPECIES 37 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 ENSGT00510000047718 #24 ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 #37 ENSGT00940000162228 #36 ENSGT00940000161104 #35 ENSGT00940000159292 #34 ENSGT00390000018807 #33 Guinea pig MODERN SPECIES 90 ADARB1 (ENSCPOG00000022969) #17 SLX9 (ENSCPOG00000036519) #19 ITGB2 (ENSCPOG00000025922) #20 PTTG1IP (ENSCPOG00000023250) #21 SUMO3 (ENSCPOG00000025203) #22 UBE2G2 (ENSCPOG00000035970) #23 ENSCPOG00000037876 ENSCPOG00000032969 ENSCPOG00000038786 ENSCPOG00000034347 TSPEAR (ENSCPOG00000004362) #24 ENSCPOG00000036402 PDXK (ENSCPOG00000039719) CSTB (ENSCPOG00000031855) RRP1 (ENSCPOG00000038986) AGPAT3 (ENSCPOG00000032718) TRAPPC10 (ENSCPOG00000011117) PWP2 (ENSCPOG00000023616) GATD3 (ENSCPOG00000011419) DNMT3L (ENSCPOG00000004070) #36 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00950000182895.a.b.j #22 Degu MODERN SPECIES 165 ENSODEG00000003412 PRR16 (ENSODEG00000003401) ENSODEG00000003064 ENSODEG00000003051 FAM170A (ENSODEG00000003032) ENSODEG00000003016 HSD17B4 (ENSODEG00000002614) ENSODEG00000018825 ENSODEG00000002485 DMXL1 (ENSODEG00000002200) ENSODEG00000018764 DTWD2 (ENSODEG00000001974) ENSODEG00000018846 ENSODEG00000018768 #22 ENSODEG00000002744 SEMA6A (ENSODEG00000002653) ENSODEG00000002602 ENSODEG00000002580 ENSODEG00000002563 ARL14EPL (ENSODEG00000002532) LVRN (ENSODEG00000002192) ENSODEG00000002163 ATG12 (ENSODEG00000002126) CDO1 (ENSODEG00000002104) TMED7 (ENSODEG00000002066) ENSODEG00000018754 FEM1C (ENSODEG00000002045) CCDC112 (ENSODEG00000002154) PGGT1B (ENSODEG00000002053) Rodentia_B ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000161526.b ENSGT00940000155183 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Kangaroo rat MODERN SPECIES 478 Ybey (ENSDORG00000024242) Mcm3ap (ENSDORG00000004416) Lss (ENSDORG00000010415) Spatc1l (ENSDORG00000010414) #8 Ftcd (ENSDORG00000004547) #9 Col6a2 (ENSDORG00000028732) #10 ENSDORG00000004103 Pcbp3 (ENSDORG00000003640) #13 Slc19a1 (ENSDORG00000008087) #14 ENSDORG00000011477 Pofut2 (ENSDORG00000009350) #16 Adarb1 (ENSDORG00000000619) #17 Fam207a (ENSDORG00000028131) #19 ENSDORG00000012531 #20 Pttg1ip (ENSDORG00000028984) #21 Sumo3 (ENSDORG00000025904) #22 Ube2g2 (ENSDORG00000025137) #23 ENSDORG00000014492 ENSDORG00000019765 ENSDORG00000026443 ENSDORG00000024465 ENSDORG00000029443 ENSDORG00000028505 ENSDORG00000019773 Myomorpha ANCESTRAL SPECIES 14 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000161526.b ENSGT00940000155183 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Lesser Egyptian jerboa MODERN SPECIES 170 2610028H24Rik (ENSJJAG00000013433) Mcm3ap (ENSJJAG00000011921) Lss (ENSJJAG00000008335) Spatc1l (ENSJJAG00000003377) #8 Ftcd (ENSJJAG00000000888) #9 Col6a2 (ENSJJAG00000023030) #10 Col6a1 (ENSJJAG00000021936) #12 Pcbp3 (ENSJJAG00000021192) #13 Slc19a1 (ENSJJAG00000020575) #14 Col18a1 (ENSJJAG00000018606) #15 Pofut2 (ENSJJAG00000017712) #16 Adarb1 (ENSJJAG00000016847) #17 ENSJJAG00000016167 #19 Itgb2 (ENSJJAG00000015668) #20 Pttg1ip (ENSJJAG00000011874) #21 Sumo3 (ENSJJAG00000011166) #22 Ube2g2 (ENSJJAG00000010215) #23 ENSJJAG00000009838 ENSJJAG00000009512 ENSJJAG00000007731 Tspear (ENSJJAG00000004036) #24 Lrrc3 (ENSJJAG00000001845) #31 Trpm2 (ENSJJAG00000022864) #32 Cfap410 (ENSJJAG00000021716) #33 Pfkl (ENSJJAG00000021078) #34 Aire (ENSJJAG00000017059) #35 ENSJJAG00000014700 #36 ENSJJAG00000014399 #37 Gatd3a (ENSJJAG00000013621) Pwp2 (ENSJJAG00000013039) Trappc10 (ENSJJAG00000011263) Muroidea ANCESTRAL SPECIES 11 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000161526.b ENSGT00940000155183 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Upper Galilee mountains blind mole rat MODERN SPECIES 1105 Ybey (ENSNGAG00000000949) Mcm3ap (ENSNGAG00000020806) Lss (ENSNGAG00000018100) Spatc1l (ENSNGAG00000016890) #8 Ftcd (ENSNGAG00000015978) #9 Col6a2 (ENSNGAG00000013702) #10 Col6a1 (ENSNGAG00000010525) #12 Pcbp3 (ENSNGAG00000005416) #13 ENSNGAG00000003477 #14 Col18a1 (ENSNGAG00000019514) #15 Pofut2 (ENSNGAG00000016043) #16 Adarb1 (ENSNGAG00000021602) #17 Fam207a (ENSNGAG00000020787) #19 Itgb2 (ENSNGAG00000015702) #20 Pttg1ip (ENSNGAG00000014261) #21 Sumo3 (ENSNGAG00000009915) #22 Ube2g2 (ENSNGAG00000002914) #23 ENSNGAG00000022913 ENSNGAG00000022654 ENSNGAG00000018160 Muroidea_A ANCESTRAL SPECIES 8 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.f ENSGT00940000161526.b ENSGT00940000155183.e ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Cricetidae ANCESTRAL SPECIES 9 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.f ENSGT00940000161526.b ENSGT00940000155183.e.a.b ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Cricetinae ANCESTRAL SPECIES 24 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.e.a.a.b.a ENSGT00940000155183.e.a.b.a.a ENSGT00940000155183.f ENSGT00940000161526.b ENSGT00940000155183.e.a.b.a.b ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a Golden Hamster MODERN SPECIES 641 Mcm3ap (ENSMAUG00000008393) Lss (ENSMAUG00000005365) Spatc1l (ENSMAUG00000006869) #8 Ftcd (ENSMAUG00000004152) #9 Col6a2 (ENSMAUG00000022073) #10 ENSMAUG00000020615 Pcbp3 (ENSMAUG00000007036) #13 ENSMAUG00000012520 Slc19a1 (ENSMAUG00000007979) #14 Col18a1 (ENSMAUG00000008076) #15 Pofut2 (ENSMAUG00000006922) #16 Adarb1 (ENSMAUG00000009334) #17 Fam207a (ENSMAUG00000009365) #19 ENSMAUG00000021821 #20 Pttg1ip (ENSMAUG00000010900) #21 Sumo3 (ENSMAUG00000009748) #22 Ube2g2 (ENSMAUG00000022077) #23 ENSMAUG00000021040 ENSMAUG00000002462 ENSMAUG00000021981 ENSMAUG00000007884 ENSMAUG00000012939 Tspear (ENSMAUG00000011883) #24 Lrrc3 (ENSMAUG00000021907) #31 Trpm2 (ENSMAUG00000005011) #32 Cfap410 (ENSMAUG00000018378) #33 Pfkl (ENSMAUG00000017741) #34 Aire (ENSMAUG00000021943) #35 Dnmt3l (ENSMAUG00000019680) #36 Icosl (ENSMAUG00000019140) #37 Pwp2 (ENSMAUG00000020265) Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 215 Gsto2 (ENSCGRG00001019874) Itprip (ENSCGRG00001015730) Cfap58 (ENSCGRG00001018536) Sorcs3 (ENSCGRG00001013586) Sorcs1 (ENSCGRG00001015262) Xpnpep1 (ENSCGRG00001023199) Add3 (ENSCGRG00001016019) ENSCGRG00001013476 Smndc1 (ENSCGRG00001012973) Mxi1 (ENSCGRG00001009794) Dusp5 (ENSCGRG00001006024) Smc3 (ENSCGRG00001024369) Rbm20 (ENSCGRG00001023235) Pdcd4 (ENSCGRG00001007322) ENSCGRG00001004791 ENSCGRG00001001812 #22 Shoc2 (ENSCGRG00001000210) Adra2a (ENSCGRG00001015710) ENSCGRG00001014865 Gpam (ENSCGRG00001022396) Tectb (ENSCGRG00001021092) Gucy2g (ENSCGRG00001020462) ENSCGRG00001019520 Zdhhc6 (ENSCGRG00001017113) Vti1a (ENSCGRG00001020765) Tcf7l2 (ENSCGRG00001019358) Habp2 (ENSCGRG00001017201) Nrap (ENSCGRG00001000170) Casp7 (ENSCGRG00001019974) Plekhs1 (ENSCGRG00001018611) Dclre1a (ENSCGRG00001017843) Chinese hamster chok1gshd MODERN SPECIES 204 Ybey (ENSCGRG00001022036) Mcm3ap (ENSCGRG00001015274) Lss (ENSCGRG00001020282) Spatc1l (ENSCGRG00001017850) #8 Ftcd (ENSCGRG00001011730) #9 Col6a2 (ENSCGRG00001003342) #10 Col6a1 (ENSCGRG00001017421) #12 Pcbp3 (ENSCGRG00001006836) #13 SLC19A1 (ENSCGRG00001016846) #14 Col18a1 (ENSCGRG00001013369) #15 Pofut2 (ENSCGRG00001022765) #16 Adarb1 (ENSCGRG00001023922) #17 Fam207a (ENSCGRG00001016236) #19 Itgb2 (ENSCGRG00001016235) #20 Pttg1ip (ENSCGRG00001000333) #21 Sumo3 (ENSCGRG00001014923) #22 Ube2g2 (ENSCGRG00001012138) #23 ENSCGRG00001011367 ENSCGRG00001023741 ENSCGRG00001013697 ENSCGRG00001016181 ENSCGRG00001012982 ENSCGRG00001018033 ENSCGRG00001011140 ENSCGRG00001007516 ENSCGRG00001006645 ENSCGRG00001000302 ENSCGRG00001000038 Gm36176 (ENSCGRG00001022992) ENSCGRG00001017382 ENSCGRG00001013139 Cricetidae_B ANCESTRAL SPECIES 12 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 13 Or7d9 (ENSMOCG00000000337) ENSMOCG00000019115 ENSMOCG00000012110 ENSMOCG00000004665 Or1m1 (ENSMOCG00000006062) ENSMOCG00000006310 Zfp558 (ENSMOCG00000018648) Naalad2 (ENSMOCG00000004722) Chordc1 (ENSMOCG00000002318) ENSMOCG00000016118 Fat3 (ENSMOCG00000011364) Mtnr1b (ENSMOCG00000007650) Slc36a4 (ENSMOCG00000018384) Deup1 (ENSMOCG00000020791) Smco4 (ENSMOCG00000006274) ENSMOCG00000021789 #22 Cep295 (ENSMOCG00000021770) Taf1d (ENSMOCG00000014011) 4931406C07Rik (ENSMOCG00000012170) Med17 (ENSMOCG00000018802) Vstm5 (ENSMOCG00000012686) ENSMOCG00000015072 ENSMOCG00000021818 Alkbh8 (ENSMOCG00000019349) Cwf19l2 (ENSMOCG00000010389) Endod1 (ENSMOCG00000016035) Sesn3 (ENSMOCG00000013595) Fam76b (ENSMOCG00000001551) Cep57 (ENSMOCG00000005014) Mtmr2 (ENSMOCG00000009930) Maml2 (ENSMOCG00000021568) Prairie vole MODERN SPECIES 352 Ybey (ENSMOCG00000012634) Mcm3ap (ENSMOCG00000018380) Lss (ENSMOCG00000020263) Spatc1l (ENSMOCG00000012025) #8 Ftcd (ENSMOCG00000013801) #9 Col6a2 (ENSMOCG00000007120) #10 Col6a1 (ENSMOCG00000015635) #12 Pcbp3 (ENSMOCG00000016127) #13 Slc19a1 (ENSMOCG00000008838) #14 Col18a1 (ENSMOCG00000019606) #15 Pofut2 (ENSMOCG00000013158) #16 Adarb1 (ENSMOCG00000018324) #17 Fam207a (ENSMOCG00000021449) #19 Itgb2 (ENSMOCG00000022498) #20 Pttg1ip (ENSMOCG00000020270) #21 ENSMOCG00000021821 #22 Ube2g2 (ENSMOCG00000001721) #23 Tspear (ENSMOCG00000013552) #24 ENSMOCG00000016087 ENSMOCG00000017107 ENSMOCG00000017419 ENSMOCG00000018107 ENSMOCG00000004341 ENSMOCG00000013216 ENSMOCG00000014262 ENSMOCG00000015079 ENSMOCG00000016139 Lrrc3 (ENSMOCG00000017485) #31 Trpm2 (ENSMOCG00000019856) #32 Cfap410 (ENSMOCG00000020426) #33 ENSMOCG00000013045 #34 Prairie vole MODERN SPECIES 15 Itgb4 (ENSMOCG00000018829) Sap30bp (ENSMOCG00000011898) Recql5 (ENSMOCG00000019642) Myo15b (ENSMOCG00000013403) Llgl2 (ENSMOCG00000016380) Tsen54 (ENSMOCG00000021585) ENSMOCG00000015226 Tmem94 (ENSMOCG00000014527) ENSMOCG00000002602 Grb2 (ENSMOCG00000017537) ENSMOCG00000013006 Mif4gd (ENSMOCG00000010287) Mrps7 (ENSMOCG00000005519) Gga3 (ENSMOCG00000003209) Nup85 (ENSMOCG00000018333) ENSMOCG00000022080 #22 ENSMOCG00000012165 Nt5c (ENSMOCG00000019361) Armc7 (ENSMOCG00000013951) Slc16a5 (ENSMOCG00000010701) Trim80 (ENSMOCG00000021797) Kctd2 (ENSMOCG00000012062) Atp5h (ENSMOCG00000015015) Mrpl58 (ENSMOCG00000015630) Cdr2l (ENSMOCG00000019874) Hid1 (ENSMOCG00000012205) ENSMOCG00000011864 Ush1g (ENSMOCG00000017696) Otop2 (ENSMOCG00000012832) Fads6 (ENSMOCG00000012241) ENSMOCG00000010764 Murinae ANCESTRAL SPECIES 18 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.f ENSGT00940000161526.b ENSGT00940000155183.e ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Rat MODERN SPECIES 16 Adck1 (ENSRNOG00000012685) Nrxn3 (ENSRNOG00000047574) dsr-2 (ENSRNOG00000066815) ENSRNOG00000062878 ENSRNOG00000063297 Dio2 (ENSRNOG00000062383) Cep128 (ENSRNOG00000003908) Tshr (ENSRNOG00000003972) Gtf2a1 (ENSRNOG00000004300) Ston2 (ENSRNOG00000004458) Sel1l (ENSRNOG00000004464) AABR07065217.2 (ENSRNOG00000042542) ENSRNOG00000030420 ENSRNOG00000066641 AABR07065265.1 (ENSRNOG00000021751) LOC103692684 (ENSRNOG00000070197) #22 ENSRNOG00000066374 Flrt2 (ENSRNOG00000003732) Galc (ENSRNOG00000003759) Gpr65 (ENSRNOG00000065590) Kcnk10 (ENSRNOG00000003813) Spata7 (ENSRNOG00000003955) Ptpn21 (ENSRNOG00000060568) Zc3h14 (ENSRNOG00000004083) Eml5 (ENSRNOG00000004207) Ttc8 (ENSRNOG00000004542) Cpg1 (ENSRNOG00000060278) Foxn3 (ENSRNOG00000004709) Efcab11 (ENSRNOG00000053317) Tdp1 (ENSRNOG00000003831) Kcnk13 (ENSRNOG00000047363) Mus ANCESTRAL SPECIES 15 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000155183.e.d.a ENSGT00940000155183.f.a ENSGT00940000155183.e.c ENSGT00940000161526.b.r.b.b ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 Shrew mouse MODERN SPECIES 22 Mcm3ap (MGP_PahariEiJ_G0030883) Lss (MGP_PahariEiJ_G0030884) Spatc1l (MGP_PahariEiJ_G0030885) #8 Ftcd (MGP_PahariEiJ_G0030886) #9 Col6a2 (MGP_PahariEiJ_G0030887) #10 Col6a1 (MGP_PahariEiJ_G0030888) #12 Pcbp3 (MGP_PahariEiJ_G0030889) #13 MGP_PahariEiJ_G0030890 Slc19a1 (MGP_PahariEiJ_G0030891) #14 Col18a1 (MGP_PahariEiJ_G0030892) #15 Pofut2 (MGP_PahariEiJ_G0030893) #16 Adarb1 (MGP_PahariEiJ_G0030894) #17 Fam207a (MGP_PahariEiJ_G0030895) #19 Itgb2 (MGP_PahariEiJ_G0030896) #20 Pttg1ip (MGP_PahariEiJ_G0030897) #21 Sumo3 (MGP_PahariEiJ_G0030898) #22 Ube2g2 (MGP_PahariEiJ_G0030899) #23 MGP_PahariEiJ_G0030900 Gm10272 (MGP_PahariEiJ_G0030901) MGP_PahariEiJ_G0030902 MGP_PahariEiJ_G0030903 Krtap12-1 (MGP_PahariEiJ_G0030904) MGP_PahariEiJ_G0030905 MGP_PahariEiJ_G0030906 MGP_PahariEiJ_G0030907 MGP_PahariEiJ_G0030908 Tspear (MGP_PahariEiJ_G0030909) #24 Lrrc3 (MGP_PahariEiJ_G0030910) #31 MGP_PahariEiJ_G0030911 #32 Cfap410 (MGP_PahariEiJ_G0030912) #33 Pfkl (MGP_PahariEiJ_G0030913) #34 Mus_A ANCESTRAL SPECIES 11 ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00900000143399 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000155183.e.c.b.b.a ENSGT00940000155183.e.c.b.a ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Ryukyu mouse MODERN SPECIES 1 Lss (MGP_CAROLIEiJ_G0015470) Spatc1l (MGP_CAROLIEiJ_G0015471) #8 Ftcd (MGP_CAROLIEiJ_G0015472) #9 Col6a2 (MGP_CAROLIEiJ_G0015473) #10 Col6a1 (MGP_CAROLIEiJ_G0015474) #12 Pcbp3 (MGP_CAROLIEiJ_G0015475) #13 MGP_CAROLIEiJ_G0015476 Slc19a1 (MGP_CAROLIEiJ_G0015477) #14 Col18a1 (MGP_CAROLIEiJ_G0015478) #15 MGP_CAROLIEiJ_G0015479 Pofut2 (MGP_CAROLIEiJ_G0015480) #16 Adarb1 (MGP_CAROLIEiJ_G0015481) #17 Fam207a (MGP_CAROLIEiJ_G0015482) #19 Itgb2 (MGP_CAROLIEiJ_G0015483) #20 Pttg1ip (MGP_CAROLIEiJ_G0015484) #21 Sumo3 (MGP_CAROLIEiJ_G0015485) #22 Ube2g2 (MGP_CAROLIEiJ_G0015486) #23 Gm10272 (MGP_CAROLIEiJ_G0015487) Gm10024 (MGP_CAROLIEiJ_G0015488) Gm10142 (MGP_CAROLIEiJ_G0015489) Krtap12-1 (MGP_CAROLIEiJ_G0015490) Gm10100 (MGP_CAROLIEiJ_G0015491) MGP_CAROLIEiJ_G0015492 Gm19668 (MGP_CAROLIEiJ_G0015493) MGP_CAROLIEiJ_G0015494 Krtap10-10 (MGP_CAROLIEiJ_G0015495) Tspear (MGP_CAROLIEiJ_G0015496) #24 Lrrc3 (MGP_CAROLIEiJ_G0015497) #31 MGP_CAROLIEiJ_G0015498 #32 Cfap410 (MGP_CAROLIEiJ_G0015499) #33 Pfkl (MGP_CAROLIEiJ_G0015500) #34 Mus_B ANCESTRAL SPECIES 10 ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00900000143399 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT01050000248522 ENSGT00390000011821.b Mouse MODERN SPECIES 1 Ybey (ENSMUSG00000033126) Mcm3ap (ENSMUSG00000001150) Lss (ENSMUSG00000033105) Spatc1l (ENSMUSG00000009115) #8 Ftcd (ENSMUSG00000001155) #9 Col6a2 (ENSMUSG00000020241) #10 Col6a1 (ENSMUSG00000001119) #12 Pcbp3 (ENSMUSG00000001120) #13 Slc19a1 (ENSMUSG00000001436) #14 Col18a1 (ENSMUSG00000001435) #15 Pofut2 (ENSMUSG00000020260) #16 Adarb1 (ENSMUSG00000020262) #17 Fam207a (ENSMUSG00000032977) #19 Itgb2 (ENSMUSG00000000290) #20 Pttg1ip (ENSMUSG00000009291) #21 Sumo3 (ENSMUSG00000020265) #22 Ube2g2 (ENSMUSG00000009293) #23 Tspear (ENSMUSG00000069581) #24 Gm19402 (ENSMUSG00000095970) Gm9508 (ENSMUSG00000112170) Gm10272 (ENSMUSG00000069584) Gm10024 (ENSMUSG00000094012) Gm10142 (ENSMUSG00000094146) Krtap12-1 (ENSMUSG00000069583) Gm10100 (ENSMUSG00000096421) Gm18596 (ENSMUSG00000112864) Gm9736 (ENSMUSG00000112380) Gm3233 (ENSMUSG00000094120) Gm3238 (ENSMUSG00000095817) Gm7138 (ENSMUSG00000095593) Gm3250 (ENSMUSG00000096481) Mus_C ANCESTRAL SPECIES 7 ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00900000143399 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.c #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.f.b.a ENSGT00940000161526.b.r.a ENSGT00940000161526.b.r.b.a.b.b ENSGT00940000161526.b.r.b.a.a ENSGT00940000161526.b.r.b.a.b.a ENSGT00940000161526.b.r.b.b ENSGT00940000155183.e.c.b.b.b ENSGT00940000155183.f.a ENSGT00940000155183.e.d.a.b ENSGT00510000047718 #24 ENSGT00940000155183.e.c.b.a ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 spretus MODERN SPECIES 1 Lss (MGP_SPRETEiJ_G0016283) Spatc1l (MGP_SPRETEiJ_G0016284) #8 Ftcd (MGP_SPRETEiJ_G0016285) #9 Col6a2 (MGP_SPRETEiJ_G0016286) #10 Col6a1 (MGP_SPRETEiJ_G0016287) #12 Pcbp3 (MGP_SPRETEiJ_G0016288) #13 MGP_SPRETEiJ_G0016289 Slc19a1 (MGP_SPRETEiJ_G0016290) #14 Col18a1 (MGP_SPRETEiJ_G0016291) #15 MGP_SPRETEiJ_G0016292 Pofut2 (MGP_SPRETEiJ_G0016293) #16 Adarb1 (MGP_SPRETEiJ_G0016294) #17 Fam207a (MGP_SPRETEiJ_G0016295) #19 Itgb2 (MGP_SPRETEiJ_G0016296) #20 Pttg1ip (MGP_SPRETEiJ_G0016297) #21 Sumo3 (MGP_SPRETEiJ_G0016298) #22 Ube2g2 (MGP_SPRETEiJ_G0016299) #23 MGP_SPRETEiJ_G0016300 Gm10272 (MGP_SPRETEiJ_G0016301) Gm10024 (MGP_SPRETEiJ_G0016302) Gm10142 (MGP_SPRETEiJ_G0016303) Krtap12-1 (MGP_SPRETEiJ_G0016304) Gm10100 (MGP_SPRETEiJ_G0016305) Gm19668 (MGP_SPRETEiJ_G0016306) MGP_SPRETEiJ_G0016307 Tspear (MGP_SPRETEiJ_G0016308) #24 MGP_SPRETEiJ_G0016309 Lrrc3 (MGP_SPRETEiJ_G0016310) #31 Trpm2 (MGP_SPRETEiJ_G0016311) #32 Cfap410 (MGP_SPRETEiJ_G0016312) #33 Pfkl (MGP_SPRETEiJ_G0016313) #34 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 3135 Recql5 (ENSMSIG00000028015) Smim6 (ENSMSIG00000028032) Smim5 (ENSMSIG00000028034) Myo15b (ENSMSIG00000028039) Llgl2 (ENSMSIG00000028102) Tsen54 (ENSMSIG00000028141) Caskin2 (ENSMSIG00000028161) Tmem94 (ENSMSIG00000028168) ENSMSIG00000028209 Grb2 (ENSMSIG00000028212) Slc25a19 (ENSMSIG00000028240) Mif4gd (ENSMSIG00000028258) Mrps7 (ENSMSIG00000028269) Gga3 (ENSMSIG00000028278) Nup85 (ENSMSIG00000028322) ENSMSIG00000028342 #22 Jpt1 (ENSMSIG00000028349) Armc7 (ENSMSIG00000028366) Nt5c (ENSMSIG00000028372) Slc16a5 (ENSMSIG00000028378) Trim80 (ENSMSIG00000028383) ENSMSIG00000028388 ENSMSIG00000028398 Mrpl58 (ENSMSIG00000028407) Cdr2l (ENSMSIG00000028417) Hid1 (ENSMSIG00000028424) Otop3 (ENSMSIG00000028450) Otop2 (ENSMSIG00000028457) Ush1g (ENSMSIG00000028465) Fads6 (ENSMSIG00000028470) Fdxr (ENSMSIG00000028471) Steppe mouse MODERN SPECIES 2060 ENSMSIG00000018269 #21 ENSMSIG00000018250 #22 ENSMSIG00000018221 #23 ENSMSIG00000018206 ENSMSIG00000018197 Gm9508 (ENSMSIG00000018192) Gm10272 (ENSMSIG00000018187) Gm10024 (ENSMSIG00000018183) Gm10142 (ENSMSIG00000018177) Krtap12-1 (ENSMSIG00000018172) Gm10100 (ENSMSIG00000018166) ENSMSIG00000018163 Lagomorpha ANCESTRAL SPECIES 342 ENSGT00940000156404 #32 ENSGT00940000154360.A.b #31 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163845 #30 ENSGT00510000047718 #24 Rabbit DUPLICATION Rabbit MODERN SPECIES 751 ENSOCUG00000021739 #22 UBE2G2 (ENSOCUG00000012944) #23 ENSOCUG00000033287 #30 ENSOCUG00000032533 ENSOCUG00000014146 ENSOCUG00000037262 #30 ENSOCUG00000037588 #30 ENSOCUG00000033100 #30 TSPEAR (ENSOCUG00000015149) #24 ENSOCUG00000000399 #30 LRRC3 (ENSOCUG00000002572) #31 ENSOCUG00000029179 #32 Rabbit MODERN SPECIES 506 ENSOCUG00000035369 ENSOCUG00000029349 ENSOCUG00000029998 ENSOCUG00000031281 ORYCUNV1R1510 (ENSOCUG00000034811) ENSOCUG00000036702 ENSOCUG00000024089 ENSOCUG00000029259 ENSOCUG00000004348 ENSOCUG00000034034 ENSOCUG00000032430 ENSOCUG00000039341 ENSOCUG00000024157 #22 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000163845 #30 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT01020000234487 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000163845 #30 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT01020000234487 Artiodactyla ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT01020000234487 ENSGT00390000011821.b Suina ANCESTRAL SPECIES 35 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.b.b ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT01020000234487 Chacoan peccary MODERN SPECIES 916 POFUT2 (ENSCWAG00000021320) #16 ADARB1 (ENSCWAG00000021307) #17 SLX9 (ENSCWAG00000021290) #19 ITGB2 (ENSCWAG00000021248) #20 PTTG1IP (ENSCWAG00000021232) #21 SUMO3 (ENSCWAG00000021223) #22 UBE2G2 (ENSCWAG00000021213) #23 Pig MODERN SPECIES 4 COL6A1 (ENSSSCG00000022506) #12 PCBP3 (ENSSSCG00000023041) #13 ENSSSCG00000030696 #14 COL18A1 (ENSSSCG00000038089) #15 ENSSSCG00000012088 #16 ADARB1 (ENSSSCG00000012089) #17 SLX9 (ENSSSCG00000028571) #19 ITGB2 (ENSSSCG00000025133) #20 PTTG1IP (ENSSSCG00000031249) #21 SUMO3 (ENSSSCG00000035795) #22 UBE2G2 (ENSSSCG00000027165) #23 ENSSSCG00000025793 ENSSSCG00000029038 ENSSSCG00000037222 ENSSSCG00000039836 ENSSSCG00000047876 ENSSSCG00000046681 ENSSSCG00000047309 ENSSSCG00000048449 ENSSSCG00000028768 TSPEAR (ENSSSCG00000022988) #24 LRRC3 (ENSSSCG00000053846) #31 TRPM2 (ENSSSCG00000023762) #32 CFAP410 (ENSSSCG00000024500) #33 PFKL (ENSSSCG00000028197) #34 Artiodactyla_a ANCESTRAL SPECIES 8 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Camelidae ANCESTRAL SPECIES 38 ENSGT00390000007870 ENSGT00940000157800 ENSGT00940000165228 ENSGT00520000062027 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.j #22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000162951 ENSGT00940000158336 ENSGT00390000003582 ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b ENSGT00950000182990.b ENSGT00390000013574 Arabian camel MODERN SPECIES 7 SAP30BP (ENSCDRG00005005647) RECQL5 (ENSCDRG00005005744) SMIM6 (ENSCDRG00005005981) SMIM5 (ENSCDRG00005005996) ENSCDRG00005006040 LLGL2 (ENSCDRG00005006411) TSEN54 (ENSCDRG00005006499) CASKIN2 (ENSCDRG00005006534) TMEM94 (ENSCDRG00005006633) GRB2 (ENSCDRG00005006824) SLC25A19 (ENSCDRG00005006954) MIF4GD (ENSCDRG00005007027) MRPS7 (ENSCDRG00005007079) GGA3 (ENSCDRG00005007129) NUP85 (ENSCDRG00005007337) ENSCDRG00005007486 #22 JPT1 (ENSCDRG00005007621) ENSCDRG00005007642 ARMC7 (ENSCDRG00005007777) SLC16A5 (ENSCDRG00005007957) ENSCDRG00005007997 KCTD2 (ENSCDRG00005008073) ENSCDRG00005008115 MRPL58 (ENSCDRG00005008161) CDR2L (ENSCDRG00005008217) HID1 (ENSCDRG00005008264) OTOP3 (ENSCDRG00005008486) OTOP2 (ENSCDRG00005008538) USH1G (ENSCDRG00005008633) FADS6 (ENSCDRG00005008674) FDXR (ENSCDRG00005008777) Artiodactyla_b ANCESTRAL SPECIES 6 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Pecora ANCESTRAL SPECIES 8 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT01100000265026 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Yarkand deer MODERN SPECIES 13 ENSCHYG00000006473 ENSCHYG00000006490 TP53INP1 (ENSCHYG00000006568) ENSCHYG00000006609 CCNE2 (ENSCHYG00000006642) INTS8 (ENSCHYG00000006742) DPY19L4 (ENSCHYG00000006979) ESRP1 (ENSCHYG00000007116) VIRMA (ENSCHYG00000007760) RAD54B (ENSCHYG00000008124) GEM (ENSCHYG00000008382) CDH17 (ENSCHYG00000008444) ENSCHYG00000008519 ENSCHYG00000008529 PDP1 (ENSCHYG00000008541) ENSCHYG00000008561 #22 TMEM67 (ENSCHYG00000008621) ENSCHYG00000009165 RBM12B (ENSCHYG00000009201) ENSCHYG00000009303 ENSCHYG00000009356 TRIQK (ENSCHYG00000009400) RUNX1T1 (ENSCHYG00000009466) ENSCHYG00000009900 LRRC69 (ENSCHYG00000009964) ENSCHYG00000010134 PIP4P2 (ENSCHYG00000010301) C8orf88 (ENSCHYG00000010352) ENSCHYG00000010442 CALB1 (ENSCHYG00000010474) DECR1 (ENSCHYG00000010587) Percora_a ANCESTRAL SPECIES 7 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT01100000265026 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Bovidae ANCESTRAL SPECIES 9 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT01100000265026 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Bovinae ANCESTRAL SPECIES 6 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT01100000265026 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Bos ANCESTRAL SPECIES 7 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.a.b.d ENSGT00940000163441.f.a.b.c.a.b.a.b.a.b.a.b ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT01100000265026 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Bos_a ANCESTRAL SPECIES 5 ENSGT00390000011514 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.a.b.d ENSGT00940000163441.f.a.b.c.a.b.a.a.a ENSGT00960000187239.b ENSGT00940000161526.b.i ENSGT00940000161526.b.j.a ENSGT00960000187239.a ENSGT00940000163441.f.a.b.c.b ENSGT00940000163441.f.a.b.c.a.b.a.b.a.b.a.b ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT01100000265026 Domestic yak MODERN SPECIES 4 AMPD3 (ENSBGRG00000004237) ADM (ENSBGRG00000004160) ENSBGRG00000004139 SBF2 (ENSBGRG00000003871) SWAP70 (ENSBGRG00000003749) ENSBGRG00000003714 WEE1 (ENSBGRG00000003666) ENSBGRG00000011132 ZNF143 (ENSBGRG00000010621) IPO7 (ENSBGRG00000010346) ENSBGRG00000010326 TMEM41B (ENSBGRG00000010234) DENND5A (ENSBGRG00000009763) SCUBE2 (ENSBGRG00000008891) NRIP3 (ENSBGRG00000008609) ENSBGRG00000008570 #22 ASCL3 (ENSBGRG00000008558) C11orf16 (ENSBGRG00000008516) ENSBGRG00000008233 DENND2B (ENSBGRG00000007364) ENSBGRG00000007115 TRIM66 (ENSBGRG00000007026) STK33 (ENSBGRG00000006761) ENSBGRG00000006613 RIC3 (ENSBGRG00000006512) TUB (ENSBGRG00000006223) EIF3F (ENSBGRG00000006058) ENSBGRG00000006022 ENSBGRG00000005999 ENSBGRG00000005965 ENSBGRG00000005955 Wild yak MODERN SPECIES 1051 POFUT2 (ENSBMUG00000002792) #16 ADARB1 (ENSBMUG00000002765) #17 SLX9 (ENSBMUG00000002589) #19 ITGB2 (ENSBMUG00000001419) #20 PTTG1IP (ENSBMUG00000000206) #21 SUMO3 (ENSBMUG00000000140) #22 ENSBMUG00000000080 #23 Bos_b ANCESTRAL SPECIES 5 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000163601 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.a.b.c.a.b.a.a.a ENSGT00960000187239.b ENSGT00940000161526.b.i ENSGT00940000161526.b.j.a ENSGT00940000163441.f.a.b.c.b ENSGT00940000163441.f.b.b.c.b ENSGT00940000163441.f.a.b.c.a.b.a.b.a.b.b ENSGT00940000163441.f.b.b.c.a ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT01100000265026 Hybrid Bos Indicus MODERN SPECIES 6 ENSBIXG00005000080 SBF2 (ENSBIXG00005016555) ENSBIXG00005016647 SWAP70 (ENSBIXG00005016714) WEE1 (ENSBIXG00005016783) ENSBIXG00005016814 ZNF143 (ENSBIXG00005002751) IPO7 (ENSBIXG00005006019) ENSBIXG00005017064 TMEM41B (ENSBIXG00005017095) ENSBIXG00005017135 DENND5A (ENSBIXG00005002794) SCUBE2 (ENSBIXG00005006584) NRIP3 (ENSBIXG00005017604) TMEM9B (ENSBIXG00005017678) ENSBIXG00005017708 #22 ASCL3 (ENSBIXG00005017718) C11orf16 (ENSBIXG00005017732) AKIP1 (ENSBIXG00005007802) DENND2B (ENSBIXG00005018004) ENSBIXG00005018100 TRIM66 (ENSBIXG00005007053) STK33 (ENSBIXG00005002945) LMO1 (ENSBIXG00005018215) RIC3 (ENSBIXG00005018251) TUB (ENSBIXG00005018323) ENSBIXG00005018389 ENSBIXG00005018402 ENSBIXG00005018421 ENSBIXG00005018435 ENSBIXG00005018449 Cow DUPLICATION Cow MODERN SPECIES MCM3AP (ENSBTAG00000003148) LSS (ENSBTAG00000018936) SPATC1L (ENSBTAG00000020409) #8 FTCD (ENSBTAG00000020404) #9 COL6A2 (ENSBTAG00000019269) #10 COL6A1 (ENSBTAG00000011802) ENSBTAG00000048318 PCBP3 (ENSBTAG00000030775) #13 SLC19A1 (ENSBTAG00000024162) #14 COL18A1 (ENSBTAG00000023907) #15 POFUT2 (ENSBTAG00000007818) #16 ADARB1 (ENSBTAG00000017486) #17 SLX9 (ENSBTAG00000017010) #19 ITGB2 (ENSBTAG00000017060) #20 PTTG1IP (ENSBTAG00000021771) #21 SUMO3 (ENSBTAG00000017321) #22 UBE2G2 (ENSBTAG00000048090) #23 ENSBTAG00000050038 ENSBTAG00000051778 KRTAP12-2 (ENSBTAG00000018610) ENSBTAG00000053056 KRTAP10-8 (ENSBTAG00000040291) ENSBTAG00000052773 ENSBTAG00000037662 ENSBTAG00000051900 TSPEAR (ENSBTAG00000018607) #24 LRRC3 (ENSBTAG00000017882) #31 TRPM2 (ENSBTAG00000021901) #32 CFAP410 (ENSBTAG00000019589) #33 PFKL (ENSBTAG00000010658) #34 ENSBTAG00000051579 Cow MODERN SPECIES 6 AMPD3 (ENSBTAG00000015821) ENSBTAG00000051340 ADM (ENSBTAG00000021048) SBF2 (ENSBTAG00000043981) SWAP70 (ENSBTAG00000001987) WEE1 (ENSBTAG00000005278) ZNF143 (ENSBTAG00000016074) ENSBTAG00000045658 IPO7 (ENSBTAG00000027722) ENSBTAG00000027723 TMEM41B (ENSBTAG00000001607) DENND5A (ENSBTAG00000006322) SCUBE2 (ENSBTAG00000020573) NRIP3 (ENSBTAG00000013366) TMEM9B (ENSBTAG00000008310) ENSBTAG00000004771 #22 ASCL3 (ENSBTAG00000032339) C15H11orf16 (ENSBTAG00000001917) AKIP1 (ENSBTAG00000001922) DENND2B (ENSBTAG00000005356) RPL27A (ENSBTAG00000005349) TRIM66 (ENSBTAG00000020890) STK33 (ENSBTAG00000011910) LMO1 (ENSBTAG00000016320) RIC3 (ENSBTAG00000004863) TUB (ENSBTAG00000004862) EIF3F (ENSBTAG00000004861) OR10A3F (ENSBTAG00000055217) OR10A3HP (ENSBTAG00000050520) OR10A3G (ENSBTAG00000053959) OR10A3I (ENSBTAG00000049963) Caprinae ANCESTRAL SPECIES 8 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000163601 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.a.b.c.a.a.a ENSGT00940000161526.b.j.a.b ENSGT00940000163441.f.b.b.c.b ENSGT00940000163441.f.a.b.c.a.b.a.b.a.b.b ENSGT00940000163441.f.a.b.c.a.b.a.a.a.a ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00510000047493.n ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 Goat DUPLICATION Goat MODERN SPECIES 23 TFPI2 (ENSCHIG00000026816) CALCR (ENSCHIG00000012930) VPS50 (ENSCHIG00000012919) HEPACAM2 (ENSCHIG00000008983) ENSCHIG00000012415 SAMD9 (ENSCHIG00000007683) CDK6 (ENSCHIG00000011604) ENSCHIG00000025157 ENSCHIG00000021463 RBM48 (ENSCHIG00000015110) PEX1 (ENSCHIG00000027266) GATAD1 (ENSCHIG00000006633) ENSCHIG00000021464 ANKIB1 (ENSCHIG00000026782) KRIT1 (ENSCHIG00000023971) ENSCHIG00000010640 #22 LRRD1 (ENSCHIG00000018885) CYP51A1 (ENSCHIG00000009890) AKAP9 (ENSCHIG00000015192) MTERF1 (ENSCHIG00000013172) FZD1 (ENSCHIG00000012408) CDK14 (ENSCHIG00000004524) CLDN12 (ENSCHIG00000000615) ENSCHIG00000005960 SUN3 (ENSCHIG00000026852) C7orf57 (ENSCHIG00000013490) UPP1 (ENSCHIG00000014663) ABCA13 (ENSCHIG00000020126) ENSCHIG00000008014 VWC2 (ENSCHIG00000020940) ZPBP (ENSCHIG00000008321) Goat MODERN SPECIES 5 PLEKHF2 (ENSCHIG00000009121) ENSCHIG00000014016 TP53INP1 (ENSCHIG00000009037) CCNE2 (ENSCHIG00000022720) INTS8 (ENSCHIG00000014183) ENSCHIG00000008889 DPY19L4 (ENSCHIG00000020474) ESRP1 (ENSCHIG00000014128) ENSCHIG00000019947 VIRMA (ENSCHIG00000015977) RAD54B (ENSCHIG00000008230) GEM (ENSCHIG00000008651) CDH17 (ENSCHIG00000012379) ENSCHIG00000001629 PDP1 (ENSCHIG00000021127) ENSCHIG00000011909 #22 TMEM67 (ENSCHIG00000015650) RBM12B (ENSCHIG00000006790) ENSCHIG00000023975 ENSCHIG00000015464 TRIQK (ENSCHIG00000008695) RUNX1T1 (ENSCHIG00000014084) SLC26A7 (ENSCHIG00000016301) LRRC69 (ENSCHIG00000016924) PIP4P2 (ENSCHIG00000015234) C8orf88 (ENSCHIG00000011393) TMEM64 (ENSCHIG00000015622) CALB1 (ENSCHIG00000021026) DECR1 (ENSCHIG00000013816) NBN (ENSCHIG00000011173) OSGIN2 (ENSCHIG00000026429) Goat MODERN SPECIES MCM3AP (ENSCHIG00000025098) LSS (ENSCHIG00000013212) SPATC1L (ENSCHIG00000023038) #8 FTCD (ENSCHIG00000010407) #9 COL6A2 (ENSCHIG00000018004) #10 ENSCHIG00000004889 PCBP3 (ENSCHIG00000015841) #13 SLC19A1 (ENSCHIG00000025066) #14 ENSCHIG00000013263 #15 ENSCHIG00000020589 POFUT2 (ENSCHIG00000000514) #16 ADARB1 (ENSCHIG00000018259) #17 SLX9 (ENSCHIG00000017685) #19 ITGB2 (ENSCHIG00000014136) #20 PTTG1IP (ENSCHIG00000021017) #21 ENSCHIG00000015930 #22 UBE2G2 (ENSCHIG00000006556) #23 ENSCHIG00000024813 ENSCHIG00000011506 ENSCHIG00000006780 ENSCHIG00000000533 ENSCHIG00000015017 ENSCHIG00000010601 ENSCHIG00000026079 ENSCHIG00000025434 ENSCHIG00000010344 ENSCHIG00000017373 ENSCHIG00000014533 ENSCHIG00000011548 TSPEAR (ENSCHIG00000017708) #24 LRRC3 (ENSCHIG00000009418) #31 Cetacea ANCESTRAL SPECIES 10 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Blue whale MODERN SPECIES 15 ENSBMSG00010004286 ENSBMSG00010004263 MCM3AP (ENSBMSG00010004232) LSS (ENSBMSG00010004134) FTCD (ENSBMSG00010004051) #9 COL6A2 (ENSBMSG00010004034) #10 COL6A1 (ENSBMSG00010004019) #12 PCBP3 (ENSBMSG00010003986) #13 SLC19A1 (ENSBMSG00010003963) #14 COL18A1 (ENSBMSG00010003836) #15 POFUT2 (ENSBMSG00010003795) #16 ADARB1 (ENSBMSG00010003764) #17 SLX9 (ENSBMSG00010007433) #19 ITGB2 (ENSBMSG00010007391) #20 PTTG1IP (ENSBMSG00010007362) #21 SUMO3 (ENSBMSG00010007354) #22 UBE2G2 (ENSBMSG00010007343) #23 ENSBMSG00010007332 ENSBMSG00010007310 ENSBMSG00010007295 TSPEAR (ENSBMSG00010007281) #24 LRRC3 (ENSBMSG00010007273) #31 TRPM2 (ENSBMSG00010007233) #32 CFAP410 (ENSBMSG00010007203) #33 PFKL (ENSBMSG00010007189) #34 AIRE (ENSBMSG00010007103) #35 DNMT3L (ENSBMSG00010007028) #36 ICOSLG (ENSBMSG00010006991) #37 GATD3 (ENSBMSG00010006949) PWP2 (ENSBMSG00010006911) TRAPPC10 (ENSBMSG00010006876) Odontoceti ANCESTRAL SPECIES 9 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162768.B ENSGT00940000163601 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Sperm whale MODERN SPECIES 19 PDE9A (ENSPCTG00005012834) HSF2BP (ENSPCTG00005014642) RRP1B (ENSPCTG00005014769) PDXK (ENSPCTG00005014904) CSTB (ENSPCTG00005015015) U2AF1 (ENSPCTG00005015178) CRYAA (ENSPCTG00005015249) AGPAT3 (ENSPCTG00005015313) TRAPPC10 (ENSPCTG00005015440) PWP2 (ENSPCTG00005015641) GATD3A (ENSPCTG00005015921) ICOSLG (ENSPCTG00005016088) #37 DNMT3L (ENSPCTG00005016240) #36 AIRE (ENSPCTG00005016581) #35 PFKL (ENSPCTG00005017230) #34 SUMO3 (ENSPCTG00005017367) #22 UBE2G2 (ENSPCTG00005017422) #23 TSPEAR (ENSPCTG00005017485) #24 ENSPCTG00005017543 ENSPCTG00005017608 LRRC3 (ENSPCTG00005017660) #31 ENSPCTG00005017676 #32 ENSPCTG00005017771 #32 ITGB2 (ENSPCTG00005017857) #20 ADARB1 (ENSPCTG00005017937) #17 POFUT2 (ENSPCTG00005017994) #16 SLC19A1 (ENSPCTG00005019281) #14 PCBP3 (ENSPCTG00005019331) #13 COL6A1 (ENSPCTG00005019551) COL6A2 (ENSPCTG00005020074) #10 FTCD (ENSPCTG00005020224) #9 Odontoceti_a ANCESTRAL SPECIES 8 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162768.B ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Odontoceti_b ANCESTRAL SPECIES 9 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162768.B ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Monodontidae ANCESTRAL SPECIES 11 ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162768.B ENSGT00940000163601 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Narwhal DUPLICATION Narwhal MODERN SPECIES 297 LSS (ENSMMNG00015000081) SPATC1L (ENSMMNG00015000171) #8 FTCD (ENSMMNG00015000207) #9 COL6A2 (ENSMMNG00015000293) #10 ENSMMNG00015000354 ENSMMNG00015000368 ENSMMNG00015000412 PCBP3 (ENSMMNG00015000534) #13 SLC19A1 (ENSMMNG00015000587) #14 ENSMMNG00015000658 POFUT2 (ENSMMNG00015000876) #16 ADARB1 (ENSMMNG00015001009) #17 SLX9 (ENSMMNG00015001036) #19 ITGB2 (ENSMMNG00015001076) #20 PTTG1IP (ENSMMNG00015001159) #21 SUMO3 (ENSMMNG00015001196) #22 UBE2G2 (ENSMMNG00015001235) #23 TSPEAR (ENSMMNG00015001273) #24 TRPM2 (ENSMMNG00015001381) #32 CFAP410 (ENSMMNG00015001497) #33 PFKL (ENSMMNG00015001526) #34 AIRE (ENSMMNG00015001730) #35 DNMT3L (ENSMMNG00015001913) #36 ICOSLG (ENSMMNG00015001974) #37 ENSMMNG00015002030 PWP2 (ENSMMNG00015002118) TRAPPC10 (ENSMMNG00015002229) AGPAT3 (ENSMMNG00015002330) RRP1 (ENSMMNG00015002366) CSTB (ENSMMNG00015002400) PDXK (ENSMMNG00015002424) Narwhal MODERN SPECIES 311 COL13A1 (ENSMMNG00015019392) FAM241B (ENSMMNG00015018581) NEUROG3 (ENSMMNG00015018559) TSPAN15 (ENSMMNG00015018513) TACR2 (ENSMMNG00015018482) HK1 (ENSMMNG00015018338) HKDC1 (ENSMMNG00015018235) SUPV3L1 (ENSMMNG00015018179) ENSMMNG00015018123 SRGN (ENSMMNG00015018086) KIFBP (ENSMMNG00015018048) DDX21 (ENSMMNG00015017919) DDX50 (ENSMMNG00015017887) ENSMMNG00015017869 STOX1 (ENSMMNG00015017814) ENSMMNG00015017786 #22 CCAR1 (ENSMMNG00015017705) ENSMMNG00015017672 TET1 (ENSMMNG00015017620) SLC25A16 (ENSMMNG00015017583) DNA2 (ENSMMNG00015017542) RUFY2 (ENSMMNG00015017154) HNRNPH3 (ENSMMNG00015017060) PBLD (ENSMMNG00015017026) MYPN (ENSMMNG00015016802) HERC4 (ENSMMNG00015016513) SIRT1 (ENSMMNG00015016378) DNAJC12 (ENSMMNG00015016250) LRRTM3 (ENSMMNG00015016206) CTNNA3 (ENSMMNG00015016145) ENSMMNG00015016066 Beluga whale DUPLICATION Beluga whale MODERN SPECIES 26 SAP30BP (ENSDLEG00000006870) RECQL5 (ENSDLEG00000006875) SMIM5 (ENSDLEG00000006889) ENSDLEG00000006899 ENSDLEG00000006941 LLGL2 (ENSDLEG00000006955) TSEN54 (ENSDLEG00000007044) CASKIN2 (ENSDLEG00000007101) TMEM94 (ENSDLEG00000007244) GRB2 (ENSDLEG00000007603) ENSDLEG00000007607 MIF4GD (ENSDLEG00000007609) MRPS7 (ENSDLEG00000007613) GGA3 (ENSDLEG00000007697) NUP85 (ENSDLEG00000009671) ENSDLEG00000010267 #22 JPT1 (ENSDLEG00000010301) NT5C (ENSDLEG00000010315) ARMC7 (ENSDLEG00000010329) SLC16A5 (ENSDLEG00000010349) ENSDLEG00000010366 ATP5H (ENSDLEG00000010375) MRPL58 (ENSDLEG00000010388) CDR2L (ENSDLEG00000010398) HID1 (ENSDLEG00000010418) OTOP3 (ENSDLEG00000010598) OTOP2 (ENSDLEG00000010663) USH1G (ENSDLEG00000010675) FADS6 (ENSDLEG00000010697) FDXR (ENSDLEG00000010749) GRIN2C (ENSDLEG00000010808) Beluga whale MODERN SPECIES 65 COL13A1 (ENSDLEG00000008033) FAM241B (ENSDLEG00000008202) NEUROG3 (ENSDLEG00000008229) TSPAN15 (ENSDLEG00000008241) TACR2 (ENSDLEG00000008300) HK1 (ENSDLEG00000008408) HKDC1 (ENSDLEG00000008490) SUPV3L1 (ENSDLEG00000008552) ENSDLEG00000008599 SRGN (ENSDLEG00000008630) KIFBP (ENSDLEG00000008645) DDX21 (ENSDLEG00000008677) DDX50 (ENSDLEG00000008715) ENSDLEG00000008782 STOX1 (ENSDLEG00000008804) ENSDLEG00000008946 #22 CCAR1 (ENSDLEG00000008968) TET1 (ENSDLEG00000009112) ENSDLEG00000009139 SLC25A16 (ENSDLEG00000009240) RUFY2 (ENSDLEG00000010171) HNRNPH3 (ENSDLEG00000011376) PBLD (ENSDLEG00000011403) ATOH7 (ENSDLEG00000011420) MYPN (ENSDLEG00000011459) HERC4 (ENSDLEG00000011906) SIRT1 (ENSDLEG00000011987) ENSDLEG00000012197 ENSDLEG00000012205 ENSDLEG00000012216 ENSDLEG00000012231 Vaquita DUPLICATION Vaquita MODERN SPECIES 15 MCM3AP (ENSPSNG00000015503) LSS (ENSPSNG00000015377) SPATC1L (ENSPSNG00000015232) #8 FTCD (ENSPSNG00000014870) #9 COL6A2 (ENSPSNG00000014738) #10 COL6A1 (ENSPSNG00000014616) #12 ENSPSNG00000014382 SLC19A1 (ENSPSNG00000014338) #14 COL18A1 (ENSPSNG00000013985) #15 POFUT2 (ENSPSNG00000013804) #16 ADARB1 (ENSPSNG00000013670) #17 SLX9 (ENSPSNG00000013591) #19 ENSPSNG00000013509 ENSPSNG00000013374 ##20 PTTG1IP (ENSPSNG00000013293) #21 SUMO3 (ENSPSNG00000013255) #22 UBE2G2 (ENSPSNG00000013185) #23 TSPEAR (ENSPSNG00000012864) #24 LRRC3 (ENSPSNG00000012828) #31 TRPM2 (ENSPSNG00000012233) #32 CFAP410 (ENSPSNG00000012160) #33 PFKL (ENSPSNG00000012080) #34 AIRE (ENSPSNG00000011555) #35 DNMT3L (ENSPSNG00000011244) #36 ICOSLG (ENSPSNG00000010983) #37 GATD3 (ENSPSNG00000010801) PWP2 (ENSPSNG00000010734) TRAPPC10 (ENSPSNG00000010640) AGPAT3 (ENSPSNG00000010576) RRP1 (ENSPSNG00000010522) ENSPSNG00000010486 Vaquita MODERN SPECIES 7 MACROH2A2 (ENSPSNG00000020131) COL13A1 (ENSPSNG00000019849) FAM241B (ENSPSNG00000019661) NEUROG3 (ENSPSNG00000019648) TSPAN15 (ENSPSNG00000019618) TACR2 (ENSPSNG00000019582) HK1 (ENSPSNG00000019292) HKDC1 (ENSPSNG00000019172) SUPV3L1 (ENSPSNG00000019123) VPS26A (ENSPSNG00000019043) SRGN (ENSPSNG00000019006) KIFBP (ENSPSNG00000018956) DDX21 (ENSPSNG00000018882) DDX50 (ENSPSNG00000018841) STOX1 (ENSPSNG00000018733) ENSPSNG00000018685 #22 CCAR1 (ENSPSNG00000018574) ENSPSNG00000018517 TET1 (ENSPSNG00000018401) DNA2 (ENSPSNG00000018291) RUFY2 (ENSPSNG00000018016) HNRNPH3 (ENSPSNG00000017903) PBLD (ENSPSNG00000017813) ATOH7 (ENSPSNG00000017790) MYPN (ENSPSNG00000017208) HERC4 (ENSPSNG00000016699) SIRT1 (ENSPSNG00000016409) ENSPSNG00000016344 DNAJC12 (ENSPSNG00000016132) LRRTM3 (ENSPSNG00000016050) CTNNA3 (ENSPSNG00000015816) Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000163845 #30 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Carnivora ANCESTRAL SPECIES 10 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183 ENSGT00940000163441.f.b.a.a ENSGT00940000163441.f.a.a.b ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Felidae ANCESTRAL SPECIES 9 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.b.a.a.c ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Panthera ANCESTRAL SPECIES 17 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.b.a.a.c ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Panthera_a ANCESTRAL SPECIES 71 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.b.a.a.c leopard MODERN SPECIES 167 DIP2A (ENSPPRG00000023404) YBEY (ENSPPRG00000003325) MCM3AP (ENSPPRG00000006018) LSS (ENSPPRG00000008675) SPATC1L (ENSPPRG00000008783) #8 FTCD (ENSPPRG00000011402) #9 COL6A2 (ENSPPRG00000024558) #10 COL6A1 (ENSPPRG00000000566) #12 PCBP3 (ENSPPRG00000003933) #13 SLC19A1 (ENSPPRG00000004605) #14 POFUT2 (ENSPPRG00000010612) #16 ADARB1 (ENSPPRG00000012281) #17 SLX9 (ENSPPRG00000012813) #19 ITGB2 (ENSPPRG00000001670) #20 PTTG1IP (ENSPPRG00000001982) #21 SUMO3 (ENSPPRG00000002862) #22 UBE2G2 (ENSPPRG00000003006) #23 ENSPPRG00000003469 Caniformia ANCESTRAL SPECIES ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000155183.a ENSGT00940000163441.f.b.a.a.a ENSGT00940000163441.f.b.a.a.b ENSGT00940000163441.f.a.a.b ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 Canidae ANCESTRAL SPECIES 39 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.i #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Canis_lupus ANCESTRAL SPECIES 38 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a.i #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.a.a.b.a ENSGT00940000161526.a.c ENSGT00940000161526.a.d ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 Dog MODERN SPECIES 24 ENSCAFG00845026433 MCM3AP (ENSCAFG00845025335) LSS (ENSCAFG00845024919) SPATC1L (ENSCAFG00845024849) #8 FTCD (ENSCAFG00845024727) #9 COL6A2 (ENSCAFG00845024255) #10 COL6A1 (ENSCAFG00845024031) #12 PCBP3 (ENSCAFG00845023560) #13 ENSCAFG00845023388 #14 COL18A1 (ENSCAFG00845022231) #15 POFUT2 (ENSCAFG00845022063) #16 ADARB1 (ENSCAFG00845021975) #17 SLX9 (ENSCAFG00845021885) #19 ITGB2 (ENSCAFG00845021592) #20 PTTG1IP (ENSCAFG00845021456) #21 ENSCAFG00845021390 #22 UBE2G2 (ENSCAFG00845021306) #23 ENSCAFG00845021222 ENSCAFG00845021169 ENSCAFG00845021000 ENSCAFG00845020843 TSPEAR (ENSCAFG00845020761) #24 TRPM2 (ENSCAFG00845020419) #32 ICOSLG (ENSCAFG00845020326) #33 PFKL (ENSCAFG00845020069) #34 AIRE (ENSCAFG00845019838) #35 DNMT3L (ENSCAFG00845019683) #36 ICOSLG (ENSCAFG00845019541) #37 GATD3 (ENSCAFG00845019382) PWP2 (ENSCAFG00845019135) TRAPPC10 (ENSCAFG00845018939) Caniformia_b ANCESTRAL SPECIES ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 Mustelinae ANCESTRAL SPECIES 67 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b ENSGT00940000154826 American mink MODERN SPECIES 122 LSS (ENSNVIG00000008849) SPATC1L (ENSNVIG00000008811) #8 FTCD (ENSNVIG00000008760) #9 ENSNVIG00000008753 #10 COL6A1 (ENSNVIG00000008572) #12 PCBP3 (ENSNVIG00000008330) #13 ENSNVIG00000008290 ENSNVIG00000008255 #15 ENSNVIG00000008220 #16 ENSNVIG00000008211 #16 ENSNVIG00000008191 #16 ADARB1 (ENSNVIG00000008112) #17 SLX9 (ENSNVIG00000008023) #19 ITGB2 (ENSNVIG00000007863) #20 PTTG1IP (ENSNVIG00000007848) #21 SUMO3 (ENSNVIG00000007817) #22 UBE2G2 (ENSNVIG00000007799) #23 ENSNVIG00000007785 ENSNVIG00000007773 ENSNVIG00000007725 #30 TSPEAR (ENSNVIG00000007674) #24 LRRC3 (ENSNVIG00000007665) #31 TRPM2 (ENSNVIG00000007475) #32 ENSNVIG00000007455 #33 PFKL (ENSNVIG00000007397) #34 AIRE (ENSNVIG00000007211) #35 ENSNVIG00000007199 #36 ICOSLG (ENSNVIG00000007190) #37 GATD3 (ENSNVIG00000007184) PWP2 (ENSNVIG00000007096) TRAPPC10 (ENSNVIG00000007089) Ferret DUPLICATION Ferret MODERN SPECIES 248 SLC19A1 (ENSMPUG00000010396) #14 ENSMPUG00000010382 ENSMPUG00000019068 COL18A1 (ENSMPUG00000010362) #15 ENSMPUG00000010360 ENSMPUG00000010357 POFUT2 (ENSMPUG00000010302) #16 ADARB1 (ENSMPUG00000010296) #17 ENSMPUG00000010290 SLX9 (ENSMPUG00000010279) #19 ITGB2 (ENSMPUG00000010269) #20 PTTG1IP (ENSMPUG00000010248) #21 ENSMPUG00000010234 #22 UBE2G2 (ENSMPUG00000010187) #23 ENSMPUG00000019067 TSPEAR (ENSMPUG00000010176) #24 LRRC3 (ENSMPUG00000019066) #31 TRPM2 (ENSMPUG00000010155) #32 CFAP410 (ENSMPUG00000010108) #33 PFKL (ENSMPUG00000010091) #34 AIRE (ENSMPUG00000010031) #35 ENSMPUG00000010029 DNMT3L (ENSMPUG00000010003) #36 ICOSLG (ENSMPUG00000009996) #37 GATD3 (ENSMPUG00000009943) PWP2 (ENSMPUG00000009936) TRAPPC10 (ENSMPUG00000009927) AGPAT3 (ENSMPUG00000009918) Ferret MODERN SPECIES 186 GALK1 (ENSMPUG00000013819) ITGB4 (ENSMPUG00000013821) SAP30BP (ENSMPUG00000013829) RECQL5 (ENSMPUG00000013833) ENSMPUG00000013837 LLGL2 (ENSMPUG00000013865) TSEN54 (ENSMPUG00000013870) CASKIN2 (ENSMPUG00000013874) TMEM94 (ENSMPUG00000013877) GRB2 (ENSMPUG00000013882) SLC25A19 (ENSMPUG00000013885) MIF4GD (ENSMPUG00000013909) MRPS7 (ENSMPUG00000013928) GGA3 (ENSMPUG00000013944) NUP85 (ENSMPUG00000013951) ENSMPUG00000013954 #22 JPT1 (ENSMPUG00000013971) NT5C (ENSMPUG00000013985) ARMC7 (ENSMPUG00000013987) SLC16A5 (ENSMPUG00000013991) ENSMPUG00000019916 ENSMPUG00000014018 KCTD2 (ENSMPUG00000014024) ENSMPUG00000014048 ENSMPUG00000014083 MRPL58 (ENSMPUG00000014086) CDR2L (ENSMPUG00000014096) HID1 (ENSMPUG00000014100) OTOP3 (ENSMPUG00000014106) ENSMPUG00000014110 ENSMPUG00000014114 Ursidae ANCESTRAL SPECIES 1 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000161526.a.a ENSGT00940000163441.f.b.a.a.a.c ENSGT00940000163441.f.b.a.a.b ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a.cb ENSGT00550000074981 ENSGT00390000003873 Ursus ANCESTRAL SPECIES 94 ENSGT00950000182997.a.b.b.a.m ENSGT00730000110871.a.a.a.b ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00950000183546 ENSGT00940000162185 #13 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000161526.a.a ENSGT00940000163441.f.a.a.b ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292.a #34 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a.cb ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Polar bear DUPLICATION Polar bear MODERN SPECIES 185 ITGB4 (ENSUMAG00000009253) SAP30BP (ENSUMAG00000009122) ENSUMAG00000009118 RECQL5 (ENSUMAG00000009115) ENSUMAG00000009111 LLGL2 (ENSUMAG00000009023) TSEN54 (ENSUMAG00000008979) ENSUMAG00000008973 TMEM94 (ENSUMAG00000008703) GRB2 (ENSUMAG00000008668) SLC25A19 (ENSUMAG00000008660) MIF4GD (ENSUMAG00000008655) MRPS7 (ENSUMAG00000008652) GGA3 (ENSUMAG00000008648) NUP85 (ENSUMAG00000008643) ENSUMAG00000008640 #22 JPT1 (ENSUMAG00000008637) NT5C (ENSUMAG00000008633) ARMC7 (ENSUMAG00000008632) SLC16A5 (ENSUMAG00000008628) ENSUMAG00000008623 ENSUMAG00000008620 ENSUMAG00000008615 ATP5PD (ENSUMAG00000008611) MRPL58 (ENSUMAG00000008604) CDR2L (ENSUMAG00000008589) HID1 (ENSUMAG00000008253) OTOP3 (ENSUMAG00000008210) ENSUMAG00000008202 ENSUMAG00000008197 FADS6 (ENSUMAG00000008188) Polar bear MODERN SPECIES 394 DIP2A (ENSUMAG00000025037) PCNT (ENSUMAG00000025235) YBEY (ENSUMAG00000025236) MCM3AP (ENSUMAG00000025237) LSS (ENSUMAG00000025396) ENSUMAG00000025397 #8 FTCD (ENSUMAG00000025398) #9 COL6A2 (ENSUMAG00000025399) #10 ENSUMAG00000025402 PCBP3 (ENSUMAG00000025403) #13 POFUT2 (ENSUMAG00000025410) #16 ADARB1 (ENSUMAG00000025411) #17 SLX9 (ENSUMAG00000025416) #19 ITGB2 (ENSUMAG00000025417) #20 PTTG1IP (ENSUMAG00000025418) #21 ENSUMAG00000025419 #22 UBE2G2 (ENSUMAG00000025420) #23 ENSUMAG00000025421 ENSUMAG00000025422 ENSUMAG00000025423 ENSUMAG00000025425 TSPEAR (ENSUMAG00000025426) #24 LRRC3 (ENSUMAG00000025427) #31 TRPM2 (ENSUMAG00000025428) #32 ENSUMAG00000025469 #33 PFKL (ENSUMAG00000025470) #34 ENSUMAG00000025471 #36 ICOSLG (ENSUMAG00000025473) #37 GATD3 (ENSUMAG00000025476) PWP2 (ENSUMAG00000025481) TRAPPC10 (ENSUMAG00000025503) Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162185 #13 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000163845 #30 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Equus ANCESTRAL SPECIES 42 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00510000047718 #24 ENSGT00940000163845 #30 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Donkey MODERN SPECIES 9 SPATC1L (ENSEASG00005007013) #8 FTCD (ENSEASG00005007018) #9 COL6A2 (ENSEASG00005007037) #10 COL6A1 (ENSEASG00005035660) #12 PCBP3 (ENSEASG00005007068) #13 SLC19A1 (ENSEASG00005007070) #14 COL18A1 (ENSEASG00005038430) #15 POFUT2 (ENSEASG00005007081) #16 ADARB1 (ENSEASG00005007085) #17 SLX9 (ENSEASG00005023956) #19 ENSEASG00005032799 #20 ENSEASG00005020183 #20 ENSEASG00005018136 #20 ENSEASG00005036911 #20 PTTG1IP (ENSEASG00005034537) #21 ENSEASG00005025870 #22 UBE2G2 (ENSEASG00005037598) #23 ENSEASG00005000235 #24 ENSEASG00005026028 #27 ENSEASG00005026444 ENSEASG00005025990 ENSEASG00005032600 ENSEASG00005014722 ENSEASG00005037300 ENSEASG00005026527 #27 ENSEASG00005033364 ENSEASG00005035707 #31 TRPM2 (ENSEASG00005000375) #32 CFAP410 (ENSEASG00005001598) #33 PFKL (ENSEASG00005001615) #34 AIRE (ENSEASG00005001620) #35 Horse MODERN SPECIES 18 ENSECAG00000047281 LSS (ENSECAG00000008899) SPATC1L (ENSECAG00000006870) #8 FTCD (ENSECAG00000011979) #9 COL6A2 (ENSECAG00000019436) #10 COL6A1 (ENSECAG00000022731) #12 ENSECAG00000047101 PCBP3 (ENSECAG00000012413) #13 SLC19A1 (ENSECAG00000002116) #14 COL18A1 (ENSECAG00000016361) #15 POFUT2 (ENSECAG00000004992) #16 ADARB1 (ENSECAG00000019917) #17 SLX9 (ENSECAG00000016590) #19 ITGB2 (ENSECAG00000023061) #20 PTTG1IP (ENSECAG00000022770) #21 ENSECAG00000021271 #22 UBE2G2 (ENSECAG00000015327) #23 ENSECAG00000049876 ENSECAG00000015092 ENSECAG00000047135 ENSECAG00000015117 ENSECAG00000051879 ENSECAG00000051909 #27 ENSECAG00000029396 #30 TSPEAR (ENSECAG00000051756) #24 LRRC3 (ENSECAG00000005082) #31 TSPEAR (ENSECAG00000008057) #33 TRPM2 (ENSECAG00000023430) #32 PFKL (ENSECAG00000017863) #34 AIRE (ENSECAG00000012924) #35 DNMT3L (ENSECAG00000009690) #36 Chiroptera ANCESTRAL SPECIES 35 ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162768.B ENSGT00960000191015 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.a.a.b ENSGT00940000163441.f.b.b ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Megabat MODERN SPECIES 2785 SUMO3 (ENSPVAG00000015248) #22 Microchiroptera ANCESTRAL SPECIES 37 ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b #8 ENSGT00390000005581.a #9 ENSGT00940000155682 #10 ENSGT00940000162889 #12 ENSGT00940000162768.B ENSGT00960000191015 ENSGT00950000183022.b #14 ENSGT00940000158212.B #15 ENSGT00390000007989 #16 ENSGT00940000155992 #17 ENSGT00390000015709 #19 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b.j #22 ENSGT00940000158193 #23 ENSGT00940000163441.f.a.a.b ENSGT00940000163441.f.b.b ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Greater horseshoe bat MODERN SPECIES 11 ENSRFEG00010001831 #9 COL6A2 (ENSRFEG00010001753) #10 COL6A1 (ENSRFEG00010001707) #12 ENSRFEG00010001629 ENSRFEG00010001580 ENSRFEG00010001565 SLC19A1 (ENSRFEG00010001553) #14 ENSRFEG00010001539 #15 ENSRFEG00010001505 #16 ENSRFEG00010001475 #16 ENSRFEG00010001456 ADARB1 (ENSRFEG00010001412) #17 SLX9 (ENSRFEG00010001351) #19 ITGB2 (ENSRFEG00010001275) #20 PTTG1IP (ENSRFEG00010001246) #21 SUMO3 (ENSRFEG00010001215) #22 UBE2G2 (ENSRFEG00010001187) #23 ENSRFEG00010001158 ENSRFEG00010001114 ENSRFEG00010001026 TSPEAR (ENSRFEG00010000980) #24 LRRC3 (ENSRFEG00010000940) #31 TRPM2 (ENSRFEG00010000872) #32 CFAP410 (ENSRFEG00010000827) #33 PFKL (ENSRFEG00010000776) #34 AIRE (ENSRFEG00010000735) #35 DNMT3L (ENSRFEG00010000669) #36 ICOSLG (ENSRFEG00010000645) #37 GATD3 (ENSRFEG00010000628) PWP2 (ENSRFEG00010000602) TRAPPC10 (ENSRFEG00010000559) Microbat DUPLICATION Microbat MODERN SPECIES 1228 ENSMLUG00000013364 PCBP3 (ENSMLUG00000003074) #13 SLC19A1 (ENSMLUG00000015818) #14 COL18A1 (ENSMLUG00000015768) #15 ENSMLUG00000025632 POFUT2 (ENSMLUG00000013242) #16 ADARB1 (ENSMLUG00000011328) #17 SLX9 (ENSMLUG00000017651) #19 ITGB2 (ENSMLUG00000003153) #20 PTTG1IP (ENSMLUG00000003464) #21 ENSMLUG00000028601 #22 UBE2G2 (ENSMLUG00000011264) #23 ENSMLUG00000011524 ENSMLUG00000010897 ENSMLUG00000017019 TSPEAR (ENSMLUG00000011225) #24 LRRC3 (ENSMLUG00000011171) #31 TRPM2 (ENSMLUG00000011096) #32 CFAP410 (ENSMLUG00000011059) #33 PFKL (ENSMLUG00000010992) #34 ENSMLUG00000010968 #35 DNMT3L (ENSMLUG00000013954) #36 GATD3 (ENSMLUG00000004837) PWP2 (ENSMLUG00000004823) TRAPPC10 (ENSMLUG00000004810) AGPAT3 (ENSMLUG00000004785) Microbat MODERN SPECIES 1419 GALK1 (ENSMLUG00000015425) ITGB4 (ENSMLUG00000015402) SAP30BP (ENSMLUG00000015391) RECQL5 (ENSMLUG00000015374) ENSMLUG00000015365 LLGL2 (ENSMLUG00000015307) TSEN54 (ENSMLUG00000015298) CASKIN2 (ENSMLUG00000015284) TMEM94 (ENSMLUG00000015265) GRB2 (ENSMLUG00000015262) SLC25A19 (ENSMLUG00000015251) MIF4GD (ENSMLUG00000015242) MRPS7 (ENSMLUG00000015237) GGA3 (ENSMLUG00000015225) NUP85 (ENSMLUG00000015211) ENSMLUG00000025342 #22 JPT1 (ENSMLUG00000015205) NT5C (ENSMLUG00000015199) ARMC7 (ENSMLUG00000012851) SLC16A5 (ENSMLUG00000012847) ENSMLUG00000030452 KCTD2 (ENSMLUG00000012842) ATP5PD (ENSMLUG00000010620) MRPL58 (ENSMLUG00000006752) HID1 (ENSMLUG00000003519) Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Carnivora ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Caniformia ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Caniformia_b ANCESTRAL SPECIES 20 ENSGT01100000263555.b ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.i.a ##22 ENSGT00940000164037 ENSGT00950000182895.a.a.a.a.b ##22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000162951 ENSGT00940000158336 ENSGT00390000003582.r ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b Ursidae ANCESTRAL SPECIES 19 ENSGT01100000263555.b ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.i.a ##22 ENSGT00940000164037 ENSGT00950000182895.a.a.a.a.b ##22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000162951 ENSGT00940000158336 ENSGT00390000003582.r ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b Giant Panda MODERN SPECIES 4 ITGB4 (ENSAMEG00000009619) SAP30BP (ENSAMEG00000009518) SMIM5 (ENSAMEG00000009617) RECQL5 (ENSAMEG00000009566) MYO15B (ENSAMEG00000027824) LLGL2 (ENSAMEG00000009430) TSEN54 (ENSAMEG00000009414) CASKIN2 (ENSAMEG00000009400) TMEM94 (ENSAMEG00000009346) GRB2 (ENSAMEG00000009339) SLC25A19 (ENSAMEG00000009328) MIF4GD (ENSAMEG00000009313) MRPS7 (ENSAMEG00000009287) GGA3 (ENSAMEG00000009242) NUP85 (ENSAMEG00000009192) ENSAMEG00000030788 ##22 ENSAMEG00000009184 ENSAMEG00000009175 SLC16A5 (ENSAMEG00000009160) ENSAMEG00000009143 ENSAMEG00000024925 ATP5PD (ENSAMEG00000009115) MRPL58 (ENSAMEG00000027504) CDR2L (ENSAMEG00000025577) HID1 (ENSAMEG00000009062) OTOP3 (ENSAMEG00000009052) USH1G (ENSAMEG00000009036) ENSAMEG00000026196 ENSAMEG00000008997 ENSAMEG00000031052 ENSAMEG00000025104 Artiodactyla ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Artiodactyla_a ANCESTRAL SPECIES 3 ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00940000155335 ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.i.a ##22 ENSGT01070000255137 ENSGT00950000182895.a.a.a.a.a.a.a ##22 ENSGT00940000164037 ENSGT00510000055459 ENSGT00950000182895.a.a.a.a.b ##22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000162951 ENSGT00940000158336 ENSGT00390000003582 ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 Artiodactyla_b ANCESTRAL SPECIES 3 ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00940000155335 ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.i.a ##22 ENSGT01070000255137 ENSGT00950000182895.a.a.a.a.a.a.a ##22 ENSGT00940000164037 ENSGT00510000055459 ENSGT00950000182895.a.a.a.a.b ##22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000162951 ENSGT00940000158336 ENSGT00390000003582 ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 Pecora ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Percora_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Bovidae ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.a ##22 Bovinae ANCESTRAL SPECIES ENSGT01100000263555.b ENSGT00390000007870 ENSGT00520000062027 ENSGT00940000157800 ENSGT00930000151032.B ENSGT00950000182906.a.a.b ENSGT00390000004214 ENSGT00940000158256 ENSGT00390000016550 ENSGT00940000155738 ENSGT00550000074902 ENSGT00940000153432.A.a ENSGT00390000014620 ENSGT00940000157333 ENSGT00390000000204 ENSGT00950000182895.a.b.i.a ##22 ENSGT00950000182895.a.a.a.a.a.a.a ##22 ENSGT00940000164037 ENSGT00950000182895.a.a.a.a.a.a.b.a.a ##22 ENSGT00940000162422 ENSGT00390000011596.b ENSGT00940000162633 ENSGT00940000159666 ENSGT00940000162951 ENSGT00390000003582.p ENSGT00390000013268 ENSGT00390000018570.b ENSGT00390000003070 ENSGT00940000160638 ENSGT00940000156691 ENSGT00390000017548.b American bison MODERN SPECIES 3285 ITGB4 (ENSBBBG00000005640) SAP30BP (ENSBBBG00000021035) SMIM5 (ENSBBBG00000021056) RECQL5 (ENSBBBG00000021117) MYO15B (ENSBBBG00000021484) LLGL2 (ENSBBBG00000021610) TSEN54 (ENSBBBG00000021631) CASKIN2 (ENSBBBG00000021684) TMEM94 (ENSBBBG00000021836) GRB2 (ENSBBBG00000005799) SLC25A19 (ENSBBBG00000021969) ENSBBBG00000021980 MRPS7 (ENSBBBG00000022001) GGA3 (ENSBBBG00000022100) NUP85 (ENSBBBG00000022127) ENSBBBG00000022135 ##22 ENSBBBG00000022173 ENSBBBG00000005852 ENSBBBG00000022193 SLC16A5 (ENSBBBG00000022204) ENSBBBG00000022217 ENSBBBG00000022243 ATP5PD (ENSBBBG00000005864) MRPL58 (ENSBBBG00000022261) CDR2L (ENSBBBG00000022283) HID1 (ENSBBBG00000005873) ENSBBBG00000005884 ENSBBBG00000005885 USH1G (ENSBBBG00000022331) ENSBBBG00000005892 FADS6 (ENSBBBG00000022340) Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Glires ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Rodentia ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Sciuridae ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Marmotini ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Alpin marmot MODERN SPECIES 1 IPO4 (ENSMMMG00000012109) REC8 (ENSMMMG00000012150) IRF9 (ENSMMMG00000012177) RNF31 (ENSMMMG00000012192) PSME2 (ENSMMMG00000012264) EMC9 (ENSMMMG00000012288) PSME1 (ENSMMMG00000012296) FITM1 (ENSMMMG00000012384) DCAF11 (ENSMMMG00000012392) PCK2 (ENSMMMG00000012681) NRL (ENSMMMG00000012717) CPNE6 (ENSMMMG00000012724) CARMIL3 (ENSMMMG00000012792) ENSMMMG00000012839 DHRS2 (ENSMMMG00000012876) ENSMMMG00000013059 ##22 ENSMMMG00000013062 JPH4 (ENSMMMG00000013123) AP1G2 (ENSMMMG00000013142) THTPA (ENSMMMG00000013179) ZFHX2 (ENSMMMG00000013186) NGDN (ENSMMMG00000013200) MYH7 (ENSMMMG00000013220) ENSMMMG00000013308 CMTM5 (ENSMMMG00000013324) IL25 (ENSMMMG00000013338) EFS (ENSMMMG00000013356) SLC22A17 (ENSMMMG00000013391) PABPN1 (ENSMMMG00000013456) BCL2L2 (ENSMMMG00000013458) PPP1R3E (ENSMMMG00000013472) Laurasiatheria ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Carnivora ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Caniformia ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Ursidae ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.a ##22 Giant Panda MODERN SPECIES SPICE1 (ENSAMEG00000005162) SIDT1 (ENSAMEG00000005184) USF3 (ENSAMEG00000005235) NAA50 (ENSAMEG00000005243) ATP6V1A (ENSAMEG00000005255) GRAMD1C (ENSAMEG00000005286) ZDHHC23 (ENSAMEG00000005320) CCDC191 (ENSAMEG00000005336) QTRT2 (ENSAMEG00000005349) DRD3 (ENSAMEG00000005377) TIGIT (ENSAMEG00000005401) ZBTB20 (ENSAMEG00000005407) GAP43 (ENSAMEG00000029486) ENSAMEG00000005712 LSAMP (ENSAMEG00000005718) ENSAMEG00000009189 ##22 IGSF11 (ENSAMEG00000007326) ENSAMEG00000026121 UPK1B (ENSAMEG00000007300) B4GALT4 (ENSAMEG00000007283) ARHGAP31 (ENSAMEG00000007278) TMEM39A (ENSAMEG00000007256) POGLUT1 (ENSAMEG00000007227) TIMMDC1 (ENSAMEG00000007212) CD80 (ENSAMEG00000007201) ADPRH (ENSAMEG00000027500) PLA1A (ENSAMEG00000007170) POPDC2 (ENSAMEG00000007148) COX17 (ENSAMEG00000029657) CFAP91 (ENSAMEG00000007087) NR1I2 (ENSAMEG00000007006) Boreoeutheria ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.b ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.b ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.b ##22 Glires ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.b ##22 Rodentia ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.b ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.b ##22 Sciuridae ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.b ##22 Marmotini ANCESTRAL SPECIES ENSGT00950000182895.a.b.i.b.b ##22 Alpin marmot MODERN SPECIES FOXA2 (ENSMMMG00000004350) PAX1 (ENSMMMG00000004326) NKX2-2 (ENSMMMG00000004284) XRN2 (ENSMMMG00000004161) KIZ (ENSMMMG00000003881) ENSMMMG00000003871 RALGAPA2 (ENSMMMG00000003453) ENSMMMG00000003417 ENSMMMG00000003408 ENSMMMG00000003290 CRNKL1 (ENSMMMG00000003244) NAA20 (ENSMMMG00000003240) RIN2 (ENSMMMG00000003172) SLC24A3 (ENSMMMG00000003105) SCP2D1 (ENSMMMG00000003079) ENSMMMG00000003073 ##22 DTD1 (ENSMMMG00000003060) SMIM26 (ENSMMMG00000003045) SEC23B (ENSMMMG00000003024) RBBP9 (ENSMMMG00000003013) POLR3F (ENSMMMG00000002996) DZANK1 (ENSMMMG00000002954) ZNF133 (ENSMMMG00000002935) KAT14 (ENSMMMG00000002887) OVOL2 (ENSMMMG00000002853) MGME1 (ENSMMMG00000002827) SNX5 (ENSMMMG00000002770) BANF2 (ENSMMMG00000002735) RRBP1 (ENSMMMG00000002621) DSTN (ENSMMMG00000002604) BFSP1 (ENSMMMG00000002526) Atlantogenata ANCESTRAL SPECIES 92 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00940000158579 #29 ENSGT00940000163845 #30 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a Afrotheria ANCESTRAL SPECIES 109 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00940000158579 #29 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Afrotheria_a ANCESTRAL SPECIES 115 ENSGT01090000259987.a.a.a #20 ENSGT00390000004977 #21 ENSGT00950000182895.a.b #22 ENSGT00940000158193 #23 ENSGT00940000158579 #29 ENSGT00510000047718 #24 ENSGT00940000154360.A.b #31 ENSGT00940000156404 #32 ENSGT00390000018807 #33 ENSGT00940000159292 #34 ENSGT00940000161104 #35 ENSGT00940000162228 #36 ENSGT00940000161590 #37 ENSGT00390000003706.a.a ENSGT00550000074981 ENSGT00390000003873 ENSGT00950000182836.b.b.b.a ENSGT00390000011821.b Elephant MODERN SPECIES 513 ITGB2 (ENSLAFG00000028448) #20 PTTG1IP (ENSLAFG00000016707) #21 SUMO3 (ENSLAFG00000001967) #22 UBE2G2 (ENSLAFG00000001963) #23 ENSLAFG00000032616 #29 ENSLAFG00000003471 ENSLAFG00000012968 #29 ENSLAFG00000020961 #29 TSPEAR (ENSLAFG00000012959) #24 LRRC3 (ENSLAFG00000005181) #31 TRPM2 (ENSLAFG00000007900) #32 CFAP410 (ENSLAFG00000000609) #33 PFKL (ENSLAFG00000021471) #34 AIRE (ENSLAFG00000008582) #35 DNMT3L (ENSLAFG00000031621) #36 ENSLAFG00000016007 #37 GATD3 (ENSLAFG00000003876) PWP2 (ENSLAFG00000003871) Xenarthra ANCESTRAL SPECIES ENSGT00950000182895.a.b #22 Armadillo MODERN SPECIES 1403 ENSDNOG00000034717 ENSDNOG00000035086 ENSDNOG00000047824 #22 ENSDNOG00000031851 ENSDNOG00000042242 ENSDNOG00000033116 ADGRL3 (ENSDNOG00000007471) TECRL (ENSDNOG00000008713) ENSDNOG00000046958 ENSDNOG00000042105