Rodentia ANCESTRAL SPECIES 19 ENSGT00390000001029 ENSGT00940000159246 #7 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.db #8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT00390000011782 #11 ENSGT01070000253766.A.b #13 ENSGT00940000164647 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871 #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00940000163562 ENSGT00950000182863.B.a #30 ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 Rodentia_B ANCESTRAL SPECIES 17 ENSGT00390000001029 ENSGT00940000159246 #7 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.db #8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT00390000011782 #11 ENSGT01070000253766.A.b #13 ENSGT00940000164647 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871 #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00950000182863.B.a #30 ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b.d ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Myomorpha ANCESTRAL SPECIES 18 ENSGT00390000001029 ENSGT00940000159246 #7 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.db #8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT00390000011782 #11 ENSGT01070000253766.A.b #13 ENSGT00940000164647 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871 #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00950000182863.B.a #30 ENSGT00800000125285 Muroidea ANCESTRAL SPECIES 14 ENSGT00390000001029 ENSGT00940000159246 #7 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.db #8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT00390000011782 #11 ENSGT01070000253766.A.b #13 ENSGT00940000164647 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871 #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00950000182863.B.a #30 ENSGT00800000125285 Muroidea_A ANCESTRAL SPECIES 3 ENSGT00390000001029 ENSGT00940000159246 #7 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.db #8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT00390000011782 #11 ENSGT01070000253766.A.b #13 ENSGT00940000164647 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871 #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00950000182863.B.a #30 ENSGT00800000125285 Cricetidae ANCESTRAL SPECIES 2 ENSGT00390000001029 ENSGT00940000159246 #7 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.db.d #8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT00390000011782 #11 ENSGT01070000253766.A.b #13 ENSGT00940000164647 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871 #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00950000182863.B.a #30 Cricetidae_B ANCESTRAL SPECIES 50 ENSGT00390000001029 ENSGT00940000159246 #7 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.cb.a.a ##8 ENSGT00390000003248.a.a.a.b.db.d #8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT00390000011782 #11 ENSGT01070000253766.A.b #13 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871 #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00950000182863.B.a #30 Prairie vole MODERN SPECIES 355 Plag1 (ENSMOCG00000015674) #7 ENSMOCG00000019980 #8 Lyn (ENSMOCG00000018677) #9 Tgs1 (ENSMOCG00000019560) #10 Tmem68 (ENSMOCG00000004085) #11 ENSMOCG00000017472 #12 Xkr4 (ENSMOCG00000014076) #13 ENSMOCG00000003814 #14 ENSMOCG00000019449 #15 ENSMOCG00000021042 #16 Mrpl15 (ENSMOCG00000015777) #17 ENSMOCG00000018466 #18 Lypla1 (ENSMOCG00000016895) #19 Tcea1 (ENSMOCG00000018663) #20 Rgs20 (ENSMOCG00000021946) #21 Atp6v1h (ENSMOCG00000013542) #22 Oprk1 (ENSMOCG00000021359) #23 Npbwr1 (ENSMOCG00000004089) #24 ENSMOCG00000013160 #25 ENSMOCG00000018517 #26 Alkal1 (ENSMOCG00000005863) #27 St18 (ENSMOCG00000021621) #28 Pcmtd1 (ENSMOCG00000015657) #29 Sntg1 (ENSMOCG00000017645) #30 ENSMOCG00000004384 #31 Hsdl2 (ENSMOCG00000011024) #32 Ptbp3 (ENSMOCG00000019609) #33 Susd1 (ENSMOCG00000000787) #34 Ugcg (ENSMOCG00000003778) #35 Shoc1 (ENSMOCG00000017996) #36 ENSMOCG00000000713 #37 Northern American deer mouse MODERN SPECIES 11 Lyn (ENSPEMG00000021545) #9 ENSPEMG00000029859 Tgs1 (ENSPEMG00000007957) #10 Tmem68 (ENSPEMG00000021534) #11 ENSPEMG00000030336 #19 Xkr4 (ENSPEMG00000021985) #13 Rp1 (ENSPEMG00000013397) #14 ENSPEMG00000014386 ENSPEMG00000026817 Sox17 (ENSPEMG00000030488) #15 Mrpl15 (ENSPEMG00000000583) #17 ENSPEMG00000027695 ENSPEMG00000014138 #19 Tcea1 (ENSPEMG00000023948) #20 Rgs20 (ENSPEMG00000009893) #21 Atp6v1h (ENSPEMG00000002059) #22 ENSPEMG00000024522 Oprk1 (ENSPEMG00000030744) #23 ENSPEMG00000004044 Npbwr1 (ENSPEMG00000001350) #24 ENSPEMG00000027986 Rb1cc1 (ENSPEMG00000022179) #25 Alkal1 (ENSPEMG00000022797) #27 ENSPEMG00000024780 ENSPEMG00000025981 St18 (ENSPEMG00000021799) #28 ENSPEMG00000029331 ENSPEMG00000009884 Pcmtd1 (ENSPEMG00000027595) #29 Sntg1 (ENSPEMG00000008856) #30 Nkain3 (ENSPEMG00000000608) Cricetinae ANCESTRAL SPECIES 31 ENSGT00390000001029 ENSGT00940000159246 #7 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.db.d #8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT00390000011782 #11 ENSGT01070000253766.A.b #13 ENSGT00940000164647 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871 #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 Chinese hamster chok1gshd MODERN SPECIES 136 Chchd7 (ENSCGRG00001011586) Plag1 (ENSCGRG00001007120) #7 Mos (ENSCGRG00001001977) ENSCGRG00001010356 #8 Lyn (ENSCGRG00001023003) #9 Tgs1 (ENSCGRG00001019470) #10 Tmem68 (ENSCGRG00001014894) #11 ENSCGRG00001014282 ENSCGRG00001013815 #13 ENSCGRG00001010786 #14 Sox17 (ENSCGRG00001009950) #15 ENSCGRG00001020498 #17 ENSCGRG00001016962 #19 ENSCGRG00001000991 #20 Rgs20 (ENSCGRG00001023847) #21 Atp6v1h (ENSCGRG00001018456) #22 Oprk1 (ENSCGRG00001014321) #23 ENSCGRG00001013124 Npbwr1 (ENSCGRG00001001773) #24 Rb1cc1 (ENSCGRG00001010377) #25 Alkal1 (ENSCGRG00001008308) #27 St18 (ENSCGRG00001012689) #28 Pcmtd1 (ENSCGRG00001010283) #29 Golden Hamster MODERN SPECIES 825 Tgs1 (ENSMAUG00000009875) #10 Tmem68 (ENSMAUG00000009287) #11 Xkr4 (ENSMAUG00000011207) #13 ENSMAUG00000012632 Rp1 (ENSMAUG00000011693) #14 ENSMAUG00000013096 #15 ENSMAUG00000014059 #15 Mrpl15 (ENSMAUG00000013305) #17 ENSMAUG00000013748 #19 Tcea1 (ENSMAUG00000016816) #20 Rgs20 (ENSMAUG00000015889) #21 Atp6v1h (ENSMAUG00000000363) #22 Murinae ANCESTRAL SPECIES 2 ENSGT00940000156731 ENSGT00390000001029 ENSGT00940000159246 #7 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.db #8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT00390000011782 #11 ENSGT01070000253766.A.b #13 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871 #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00950000182863.B.a #30 ENSGT00390000005213 ENSGT00390000003849 ENSGT00390000010499 ENSGT00940000157709 ENSGT00390000002854 ENSGT00940000153776.a.a ENSGT01090000260080.b.b ENSGT00940000162447 Mus ANCESTRAL SPECIES 3 ENSGT00940000156731 ENSGT00390000001029 ENSGT00940000159246 #7 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.db #8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT01100000265193 ENSGT01070000253766.A.b #13 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871 #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00950000182863.B.a #30 ENSGT00390000005213 ENSGT00390000003849 ENSGT00390000010499 ENSGT00940000157709 ENSGT00390000002854 ENSGT00940000153776.a.a ENSGT01090000260080.b.b ENSGT00940000162447 Mus_A ANCESTRAL SPECIES 5 ENSGT01070000253766.A.b #13 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871 #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00950000182863.B.a #30 ENSGT00390000005213 ENSGT00390000003849 ENSGT00390000010499 ENSGT00940000157709 ENSGT00390000002854 ENSGT00940000153776.a.a ENSGT01090000260080.b.b ENSGT00940000162447 Mus_B ANCESTRAL SPECIES 21 ENSGT01070000253766.A.b #13 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871.`b #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00950000182863.B.a #30 ENSGT00390000005213 ENSGT00390000003849 ENSGT00390000010499 ENSGT00940000157709 ENSGT00390000002854 ENSGT00940000153776.a.a ENSGT01090000260080.b.b ENSGT00940000162447 Mouse MODERN SPECIES Xkr4 (ENSMUSG00000051951) #13 Rp1 (ENSMUSG00000025900) #14 Sox17 (ENSMUSG00000025902) #15 Mrpl15 (ENSMUSG00000033845) #17 Lypla1 (ENSMUSG00000025903) #19 Tcea1 (ENSMUSG00000033813) #20 Rgs20 (ENSMUSG00000002459) #21 Atp6v1h (ENSMUSG00000033793) #22 Oprk1 (ENSMUSG00000025905) #23 Npbwr1 (ENSMUSG00000033774) #24 Rb1cc1 (ENSMUSG00000025907) #25 Alkal1 (ENSMUSG00000087247) #27 St18 (ENSMUSG00000033740) #28 Pcmtd1 (ENSMUSG00000051285) #29 Sntg1 (ENSMUSG00000025909) #30 Rrs1 (ENSMUSG00000061024) Adhfe1 (ENSMUSG00000025911) Vxn (ENSMUSG00000067879) Mybl1 (ENSMUSG00000025912) Vcpip1 (ENSMUSG00000045210) Sgk3 (ENSMUSG00000025915) Mcmdc2 (ENSMUSG00000046101) Tcf24 (ENSMUSG00000099032) Mus_C ANCESTRAL SPECIES 33 ENSGT01070000253766.A.b #13 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000161936 #24 ENSGT00390000015871.`b #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00950000182863.B.a #30 ENSGT00390000005213 ENSGT00390000003849 ENSGT00390000010499 ENSGT00940000157709 ENSGT00390000002854 ENSGT00940000153776.a.a ENSGT01090000260080.b.b ENSGT00940000162447 ENSGT00940000158260 spretus MODERN SPECIES Xkr4 (MGP_SPRETEiJ_G0014722) #13 MGP_SPRETEiJ_G0014723 Rp1 (MGP_SPRETEiJ_G0014724) #14 Sox17 (MGP_SPRETEiJ_G0014725) #15 Mrpl15 (MGP_SPRETEiJ_G0014726) #17 Lypla1 (MGP_SPRETEiJ_G0014727) #19 MGP_SPRETEiJ_G0014728 Tcea1 (MGP_SPRETEiJ_G0014729) #20 MGP_SPRETEiJ_G0014730 #21 Atp6v1h (MGP_SPRETEiJ_G0014731) #22 Oprk1 (MGP_SPRETEiJ_G0014732) #23 Npbwr1 (MGP_SPRETEiJ_G0014733) #24 Rb1cc1 (MGP_SPRETEiJ_G0014734) #25 MGP_SPRETEiJ_G0014735 #27 St18 (MGP_SPRETEiJ_G0014736) #28 Pcmtd1 (MGP_SPRETEiJ_G0014737) #29 Sntg1 (MGP_SPRETEiJ_G0014738) #30 Rrs1 (MGP_SPRETEiJ_G0014739) Adhfe1 (MGP_SPRETEiJ_G0014740) Vxn (MGP_SPRETEiJ_G0014741) Mybl1 (MGP_SPRETEiJ_G0014742) Vcpip1 (MGP_SPRETEiJ_G0014743) Sgk3 (MGP_SPRETEiJ_G0014744) Mcmdc2 (MGP_SPRETEiJ_G0014745) Tcf24 (MGP_SPRETEiJ_G0014746) Steppe mouse MODERN SPECIES 2822 ENSMSIG00000023492 #14 ENSMSIG00000023502 Sox17 (ENSMSIG00000023511) #15 ENSMSIG00000023552 ENSMSIG00000023618 #17 Lypla1 (ENSMSIG00000023662) #19 Tcea1 (ENSMSIG00000023777) #20 Rgs20 (ENSMSIG00000023817) #21 ENSMSIG00000023857 Atp6v1h (ENSMSIG00000023868) #22 Ryukyu mouse MODERN SPECIES Xkr4 (MGP_CAROLIEiJ_G0013919) #13 Rp1 (MGP_CAROLIEiJ_G0013920) #14 Sox17 (MGP_CAROLIEiJ_G0013921) #15 Mrpl15 (MGP_CAROLIEiJ_G0013922) #17 Lypla1 (MGP_CAROLIEiJ_G0013923) #19 MGP_CAROLIEiJ_G0013924 Tcea1 (MGP_CAROLIEiJ_G0013925) #20 Rgs20 (MGP_CAROLIEiJ_G0013926) #21 Atp6v1h (MGP_CAROLIEiJ_G0013927) #22 Oprk1 (MGP_CAROLIEiJ_G0013928) #23 Npbwr1 (MGP_CAROLIEiJ_G0013929) #24 Rb1cc1 (MGP_CAROLIEiJ_G0013930) #25 Alkal1 (MGP_CAROLIEiJ_G0013931) #27 St18 (MGP_CAROLIEiJ_G0013932) #28 MGP_CAROLIEiJ_G0013933 #29 Sntg1 (MGP_CAROLIEiJ_G0013934) #30 MGP_CAROLIEiJ_G0013935 Rrs1 (MGP_CAROLIEiJ_G0013936) Adhfe1 (MGP_CAROLIEiJ_G0013937) Vxn (MGP_CAROLIEiJ_G0013938) Mybl1 (MGP_CAROLIEiJ_G0013939) Vcpip1 (MGP_CAROLIEiJ_G0013940) Sgk3 (MGP_CAROLIEiJ_G0013941) Mcmdc2 (MGP_CAROLIEiJ_G0013942) Shrew mouse MODERN SPECIES 14 Plag1 (MGP_PahariEiJ_G0023906) #7 Mos (MGP_PahariEiJ_G0023905) Rps20 (MGP_PahariEiJ_G0023904) #8 Lyn (MGP_PahariEiJ_G0023903) #9 MGP_PahariEiJ_G0023902 #10 MGP_PahariEiJ_G0023901 #10 MGP_PahariEiJ_G0023900 Xkr4 (MGP_PahariEiJ_G0023899) #13 Rp1 (MGP_PahariEiJ_G0023898) #14 Sox17 (MGP_PahariEiJ_G0023897) #15 Mrpl15 (MGP_PahariEiJ_G0023896) #17 Lypla1 (MGP_PahariEiJ_G0023895) #19 MGP_PahariEiJ_G0023894 Tcea1 (MGP_PahariEiJ_G0023893) #20 Rgs20 (MGP_PahariEiJ_G0023892) #21 Atp6v1h (MGP_PahariEiJ_G0023891) #22 Oprk1 (MGP_PahariEiJ_G0023890) #23 Npbwr1 (MGP_PahariEiJ_G0023889) #24 Rb1cc1 (MGP_PahariEiJ_G0023888) #25 MGP_PahariEiJ_G0023887 #27 St18 (MGP_PahariEiJ_G0023886) #28 Pcmtd1 (MGP_PahariEiJ_G0023885) #29 Sntg1 (MGP_PahariEiJ_G0023884) #30 Rrs1 (MGP_PahariEiJ_G0023883) Adhfe1 (MGP_PahariEiJ_G0023882) Vxn (MGP_PahariEiJ_G0023881) Mybl1 (MGP_PahariEiJ_G0023880) Vcpip1 (MGP_PahariEiJ_G0023879) Sgk3 (MGP_PahariEiJ_G0023878) Mcmdc2 (MGP_PahariEiJ_G0023877) Tcf24 (MGP_PahariEiJ_G0023876) Rat MODERN SPECIES 15 Mos (ENSRNOG00000008567) Rps20-ps10 (ENSRNOG00000008555) ##8 Lyn (ENSRNOG00000008180) #9 Tgs1 (ENSRNOG00000008156) #10 Tmem68 (ENSRNOG00000008872) #11 Xkr4 (ENSRNOG00000027276) #13 Cyld-ps1 (ENSRNOG00000008861) Rp1 (ENSRNOG00000008807) #14 ENSRNOG00000065942 Sumo4 (ENSRNOG00000069967) Sox17 (ENSRNOG00000027357) #15 Mrpl15 (ENSRNOG00000008566) #17 Lypla1 (ENSRNOG00000008320) #19 Tcea1 (ENSRNOG00000022323) #20 Rgs20 (ENSRNOG00000008100) #21 Atp6v1h (ENSRNOG00000030862) #22 Oprk1 (ENSRNOG00000007647) #23 Npbwr1 (ENSRNOG00000007640) #24 Rb1cc1 (ENSRNOG00000006833) #25 Alkal1 (ENSRNOG00000048703) #27 St18 (ENSRNOG00000006200) #28 AABR07046956.1 (ENSRNOG00000040219) Pcmtd1 (ENSRNOG00000005730) #29 ENSRNOG00000064844 ENSRNOG00000063427 ENSRNOG00000063845 Sntg1 (ENSRNOG00000007294) #30 Rrs1 (ENSRNOG00000007240) Adhfe1 (ENSRNOG00000007069) Vxn (ENSRNOG00000021663) Mybl1 (ENSRNOG00000021669) Upper Galilee mountains blind mole rat MODERN SPECIES 1264 Xkr4 (ENSNGAG00000023450) #13 ENSNGAG00000022981 #14 Sox17 (ENSNGAG00000014900) #15 Mrpl15 (ENSNGAG00000016607) #17 ENSNGAG00000020474 #19 ENSNGAG00000018056 #20 Rgs20 (ENSNGAG00000013569) #21 Atp6v1h (ENSNGAG00000014505) #22 Oprk1 (ENSNGAG00000018928) #23 Npbwr1 (ENSNGAG00000008543) #24 Lesser Egyptian jerboa MODERN SPECIES 51 Chchd7 (ENSJJAG00000004951) Plag1 (ENSJJAG00000008706) #7 ENSJJAG00000000512 ##8 Lyn (ENSJJAG00000014669) #9 Tgs1 (ENSJJAG00000016239) #10 Tmem68 (ENSJJAG00000009727) #11 ENSJJAG00000003859 Xkr4 (ENSJJAG00000013870) #13 ENSJJAG00000015642 #14 ENSJJAG00000012132 Sox17 (ENSJJAG00000021381) #15 Mrpl15 (ENSJJAG00000016599) #17 ENSJJAG00000019339 #19 Tcea1 (ENSJJAG00000020282) #20 Rgs20 (ENSJJAG00000004359) #21 Atp6v1h (ENSJJAG00000018257) #22 Oprk1 (ENSJJAG00000019887) #23 ENSJJAG00000011904 Npbwr1 (ENSJJAG00000012018) #24 ENSJJAG00000019800 #25 Alkal1 (ENSJJAG00000000797) #27 St18 (ENSJJAG00000020074) #28 ENSJJAG00000008876 #29 ENSJJAG00000011205 Cxcl13 (ENSJJAG00000015547) Cnot6l (ENSJJAG00000020583) ENSJJAG00000012403 Mrpl1 (ENSJJAG00000012571) ENSJJAG00000017212 Fras1 (ENSJJAG00000013532) Anxa3 (ENSJJAG00000013184) Kangaroo rat MODERN SPECIES 328 ENSDORG00000025931 Chchd7 (ENSDORG00000004592) Plag1 (ENSDORG00000011524) #7 ENSDORG00000029409 Rps20 (ENSDORG00000005794) #8 Lyn (ENSDORG00000000747) #9 Tgs1 (ENSDORG00000012484) #10 ENSDORG00000012483 #11 Xkr4 (ENSDORG00000005763) #13 Rp1 (ENSDORG00000009139) #14 Sox17 (ENSDORG00000027735) #15 Mrpl15 (ENSDORG00000012200) #17 Lypla1 (ENSDORG00000001479) #19 Tcea1 (ENSDORG00000015058) #20 ENSDORG00000006333 #21 Atp6v1h (ENSDORG00000007689) #22 Oprk1 (ENSDORG00000009506) #23 Npbwr1 (ENSDORG00000013949) #24 ENSDORG00000005679 #25 ENSDORG00000029422 #25 Alkal1 (ENSDORG00000001904) #27 St18 (ENSDORG00000002635) #28 Pcmtd1 (ENSDORG00000025253) #29 Sntg1 (ENSDORG00000010206) #30 Snai2 (ENSDORG00000029620) Efcab1 (ENSDORG00000000823) Ube2v2 (ENSDORG00000029077) ENSDORG00000004422 Prkdc (ENSDORG00000004417) ENSDORG00000025707 Itgb1 (ENSDORG00000007780) Rodentia_A ANCESTRAL SPECIES 18 ENSGT00940000156731 ENSGT00390000001029 ENSGT00940000159246 #7 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.cb.a.a ##8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT00390000011782 #11 ENSGT01070000253766.A.b #13 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871 #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00940000163562 ENSGT00950000182863.B.a #30 ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 Hystricomorpha ANCESTRAL SPECIES 12 ENSGT00940000159246 #7 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.cb.a.a ##8 ENSGT00390000003248.a.b.b ##8 ENSGT00390000003248.a.a.a.b.cb.b.b ##8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT00390000011782 #11 ENSGT01070000253766.A.b #13 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185.cb #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871.v #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00950000182863.B.a #30 ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000155908.b Hystricomorpha_a ANCESTRAL SPECIES 9 ENSGT00390000001029 ENSGT00940000159246 #7 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.cb.a.a ##8 ENSGT00390000003248.a.a.a.b.cb.b.b ##8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT00390000011782 #11 ENSGT01070000253766.A.b #13 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185.cb #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871.v #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00950000182863.B.a #30 ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00390000014654 ENSGT00940000155908.b ENSGT00940000161075 Hystricomorpha_b ANCESTRAL SPECIES 27 ENSGT00950000183149.A ENSGT00940000163618 ENSGT00940000156731 ENSGT00390000001029 ENSGT00940000159246 #7 ENSGT00390000003248.a.a.a.b.cb.b.b ##8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT00390000011782 #11 ENSGT01070000253766.A.b #13 ENSGT00940000154242.b #14 ENSGT00390000009040 #17 ENSGT00940000154185.bb.a #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871.v #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00950000182863.B.a #30 ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00390000014654 ENSGT00940000155908.b ENSGT00940000161075 Degu MODERN SPECIES 95 ENSODEG00000002751 SDR16C5 (ENSODEG00000002794) ENSODEG00000002863 PLAG1 (ENSODEG00000002880) #7 LYN (ENSODEG00000002925) #9 ENSODEG00000018874 TGS1 (ENSODEG00000002948) #10 ENSODEG00000003120 XKR4 (ENSODEG00000003156) #13 ENSODEG00000003202 #14 ENSODEG00000018873 ENSODEG00000002691 ENSODEG00000002737 #17 ENSODEG00000002753 #20 ENSODEG00000002823 #21 ATP6V1H (ENSODEG00000002840) #22 ENSODEG00000002936 OPRK1 (ENSODEG00000002988) #23 NPBWR1 (ENSODEG00000019191) #24 ENSODEG00000003047 #25 ENSODEG00000003192 #25 ENSODEG00000003208 #27 ST18 (ENSODEG00000003288) #28 PCMTD1 (ENSODEG00000003571) #29 SNTG1 (ENSODEG00000003621) #30 ENSODEG00000003654 CLXN (ENSODEG00000003725) ENSODEG00000003745 ENSODEG00000018960 ENSODEG00000019042 ENSODEG00000004479 Long-tailed chinchilla MODERN SPECIES 161 PENK (ENSCLAG00000017733) ENSCLAG00000009495 SDR16C5 (ENSCLAG00000012258) CHCHD7 (ENSCLAG00000009729) PLAG1 (ENSCLAG00000013839) #7 RPS20 (ENSCLAG00000015938) ##8 LYN (ENSCLAG00000010085) #9 TGS1 (ENSCLAG00000009468) #10 TMEM68 (ENSCLAG00000009473) #11 XKR4 (ENSCLAG00000010575) #13 ENSCLAG00000011553 #14 MRPL15 (ENSCLAG00000010064) #17 ENSCLAG00000014943 #19 TCEA1 (ENSCLAG00000013516) #20 ENSCLAG00000016009 #21 ATP6V1H (ENSCLAG00000009337) #22 OPRK1 (ENSCLAG00000009850) #23 ENSCLAG00000009340 RB1CC1 (ENSCLAG00000009807) #25 ENSCLAG00000014346 #27 ST18 (ENSCLAG00000011202) #28 PCMTD1 (ENSCLAG00000009964) #29 ENSCLAG00000014877 SNTG1 (ENSCLAG00000013065) #30 SNAI2 (ENSCLAG00000011797) CLXN (ENSCLAG00000015811) UBE2V2 (ENSCLAG00000010839) MCM4 (ENSCLAG00000014363) PRKDC (ENSCLAG00000009459) SPIDR (ENSCLAG00000009550) ENSCLAG00000009679 Guinea pig MODERN SPECIES 64 PLAG1 (ENSCPOG00000039131) #7 MOS (ENSCPOG00000020476) ENSCPOG00000011697 ##8 ENSCPOG00000030320 LYN (ENSCPOG00000011693) #9 TGS1 (ENSCPOG00000009713) #10 TMEM68 (ENSCPOG00000019826) #11 XKR4 (ENSCPOG00000003676) #13 ENSCPOG00000039324 #14 SOX17 (ENSCPOG00000000892) #15 MRPL15 (ENSCPOG00000035946) #17 LYPLA1 (ENSCPOG00000022715) #19 TCEA1 (ENSCPOG00000005886) #20 ENSCPOG00000038533 #21 ENSCPOG00000022816 ATP6V1H (ENSCPOG00000012174) #22 ENSCPOG00000023180 OPRK1 (ENSCPOG00000006607) #23 NPBWR1 (ENSCPOG00000019602) #24 RB1CC1 (ENSCPOG00000020341) #25 ENSCPOG00000034718 ENSCPOG00000032897 #27 ST18 (ENSCPOG00000005486) #28 PCMTD1 (ENSCPOG00000038704) #29 SNTG1 (ENSCPOG00000010462) #30 ENSCPOG00000033449 CLXN (ENSCPOG00000003325) UBE2V2 (ENSCPOG00000039321) MCM4 (ENSCPOG00000003682) PRKDC (ENSCPOG00000013944) ENSCPOG00000036691 Naked mole-rat female MODERN SPECIES 1 ENSHGLG00000020767 ENSHGLG00000041788 #14 SOX17 (ENSHGLG00000009392) #15 MRPL15 (ENSHGLG00000038800) #17 ENSHGLG00000015507 #19 TCEA1 (ENSHGLG00000036590) #20 ENSHGLG00000043019 ENSHGLG00000045461 ENSHGLG00000050091 ATP6V1H (ENSHGLG00000018810) #22 Oprk1 (ENSHGLG00000038296) #23 ENSHGLG00000046007 ENSHGLG00000003564 ENSHGLG00000015610 NPBWR1 (ENSHGLG00000021373) #24 ENSHGLG00000013146 RB1CC1 (ENSHGLG00000018518) #25 ALKAL1 (ENSHGLG00000038780) #27 ENSHGLG00000016233 ENSHGLG00000014452 #28 PCMTD1 (ENSHGLG00000045944) #29 ENSHGLG00000045690 ENSHGLG00000048304 ENSHGLG00000044626 SNTG1 (ENSHGLG00000005037) #30 Sciuridae ANCESTRAL SPECIES 17 ENSGT00390000001029 ENSGT00940000159246 #7 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.db #8 ENSGT00390000003248.a.a.a.b.cb.a.a ##8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT00390000011782 #11 ENSGT01070000253766.A.b #13 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871 #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00940000163562 ENSGT00950000182863.B.a #30 ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 Marmotini ANCESTRAL SPECIES 10 ENSGT00940000156731 ENSGT00390000001029 ENSGT00940000159246 #7 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.db #8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT00390000011782 #11 ENSGT01070000253766.A.b #13 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871 #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00940000163562 ENSGT00950000182863.B.a #30 ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00940000168767 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D Alpin marmot MODERN SPECIES 16 SDR16C5 (ENSMMMG00000001394) CHCHD7 (ENSMMMG00000001389) PLAG1 (ENSMMMG00000001377) #7 MOS (ENSMMMG00000001371) RPS20 (ENSMMMG00000001350) #8 LYN (ENSMMMG00000001265) #9 TGS1 (ENSMMMG00000001130) #10 TMEM68 (ENSMMMG00000001093) #11 RP1 (ENSMMMG00000001046) #14 ENSMMMG00000001041 SOX17 (ENSMMMG00000001029) #15 ENSMMMG00000001024 MRPL15 (ENSMMMG00000001003) #17 LYPLA1 (ENSMMMG00000000994) #19 TCEA1 (ENSMMMG00000000970) #20 ATP6V1H (ENSMMMG00000000819) #22 OPRK1 (ENSMMMG00000000792) #23 ENSMMMG00000000769 ENSMMMG00000000761 NPBWR1 (ENSMMMG00000000755) #24 RB1CC1 (ENSMMMG00000000733) #25 ALKAL1 (ENSMMMG00000000712) #27 ST18 (ENSMMMG00000000496) #28 ENSMMMG00000000469 PCMTD1 (ENSMMMG00000000404) #29 PXDNL (ENSMMMG00000000367) SNTG1 (ENSMMMG00000000104) #30 ENSMMMG00000000024 ENSMMMG00000000012 SNAI2 (ENSMMMG00000022198) CLXN (ENSMMMG00000022191) Marmotini_b ANCESTRAL SPECIES 52 ENSGT00940000156731 ENSGT00390000001029 ENSGT00940000159246 #7 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.cb.a.a ##8 ENSGT00940000158011 #9 ENSGT00390000018056 #10 ENSGT00390000011782 #11 ENSGT01070000253766.A.b #13 ENSGT00940000154242.b #14 ENSGT00940000156694 #15 ENSGT00390000009040 #17 ENSGT00940000154185 #19 ENSGT00940000155121 #20 ENSGT00940000159123 #21 ENSGT00390000003289 #22 ENSGT00940000157341 #23 ENSGT00940000161936 #24 ENSGT00390000015871 #25 ENSGT00940000159969.a #27 ENSGT00940000159905 #28 ENSGT00950000183032.A.a #29 ENSGT00950000182863.B.a #30 ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00940000168767 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 Arctic ground squirrel MODERN SPECIES 137 RPS20 (ENSUPAG00010002625) ##8 LYN (ENSUPAG00010002635) #9 TMEM68 (ENSUPAG00010002929) #11 XKR4 (ENSUPAG00010002936) #13 RP1 (ENSUPAG00010002942) #14 ENSUPAG00010002961 SOX17 (ENSUPAG00010002964) #15 MRPL15 (ENSUPAG00010002973) #17 LYPLA1 (ENSUPAG00010002986) #19 TCEA1 (ENSUPAG00010003008) #20 ENSUPAG00010003023 RGS20 (ENSUPAG00010003027) #21 ATP6V1H (ENSUPAG00010003037) #22 OPRK1 (ENSUPAG00010003107) #23 ENSUPAG00010003124 NPBWR1 (ENSUPAG00010003128) #24 ENSUPAG00010003143 RB1CC1 (ENSUPAG00010003148) #25 ALKAL1 (ENSUPAG00010003181) #27 ST18 (ENSUPAG00010003189) #28 ENSUPAG00010003296 PCMTD1 (ENSUPAG00010003305) #29 PXDNL (ENSUPAG00010003311) Squirrel MODERN SPECIES 96 ENSSTOG00000024373 SDR16C5 (ENSSTOG00000002736) CHCHD7 (ENSSTOG00000002724) PLAG1 (ENSSTOG00000002716) #7 MOS (ENSSTOG00000027015) LYN (ENSSTOG00000006783) #9 TGS1 (ENSSTOG00000009597) #10 TMEM68 (ENSSTOG00000021124) #11 XKR4 (ENSSTOG00000026911) #13 ENSSTOG00000031109 #14 SOX17 (ENSSTOG00000022517) #15 MRPL15 (ENSSTOG00000015737) #17 LYPLA1 (ENSSTOG00000015303) #19 ENSSTOG00000021179 #20 RGS20 (ENSSTOG00000015292) #21 ATP6V1H (ENSSTOG00000015285) #22 ENSSTOG00000033286 OPRK1 (ENSSTOG00000011698) #23 Eurasian red squirrel MODERN SPECIES MOS (ENSSVLG00005010710) RPS20 (ENSSVLG00005010588) ##8 LYN (ENSSVLG00005010475) #9 TGS1 (ENSSVLG00005010446) #10 ENSSVLG00005010412 ENSSVLG00005010285 #11 XKR4 (ENSSVLG00005010234) #13 RP1 (ENSSVLG00005009858) #14 SOX17 (ENSSVLG00005009789) #15 MRPL15 (ENSSVLG00005009764) #17 ENSSVLG00005009666 #19 ENSSVLG00005009646 TCEA1 (ENSSVLG00005009501) #20 RGS20 (ENSSVLG00005009394) #21 ENSSVLG00005009360 ATP6V1H (ENSSVLG00005009299) #22 ENSSVLG00005009270 OPRK1 (ENSSVLG00005009227) #23 ENSSVLG00005009204 ENSSVLG00005009187 NPBWR1 (ENSSVLG00005009175) #24 ENSSVLG00005009157 RB1CC1 (ENSSVLG00005009081) #25 ALKAL1 (ENSSVLG00005009002) #27 ENSSVLG00005008883 #28 ENSSVLG00005008837 PCMTD1 (ENSSVLG00005008801) #29 PXDNL (ENSSVLG00005008684) SNTG1 (ENSSVLG00005007613) #30 PPDPFL (ENSSVLG00005007203) ENSSVLG00005007187