Euteleostomi ANCESTRAL SPECIES 59 ENSGT00390000008798.d ENSGT00940000156635 ENSGT00940000158879 ENSGT00940000166901 ENSGT00390000007694 ENSGT00390000015361 ENSGT00960000190936 ENSGT00530000063727.A ENSGT00390000014549 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 Sarcopterygii ANCESTRAL SPECIES 29 ENSGT00390000007694 ENSGT00390000015361 ENSGT00960000190936 ENSGT00530000063727.A ENSGT00390000014549 ENSGT00390000007586.a.a ENSGT00510000046787.f ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00940000160064.a.a ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00980000199472 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 Tetrapoda ANCESTRAL SPECIES 35 ENSGT00940000156635 ENSGT00940000158879 ENSGT00390000015361 ENSGT00960000190936 ENSGT00530000063727.A ENSGT00390000014549 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00940000160064.a.a ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00980000199472 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 Amniota ANCESTRAL SPECIES 10 ENSGT00940000156635 ENSGT00940000158879 ENSGT00390000015361 ENSGT00960000190936 ENSGT00530000063727.A ENSGT00390000014549 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00940000160064.a.a ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 Mammalia ANCESTRAL SPECIES 34 ENSGT00950000183079.B ENSGT00940000157528 ENSGT00940000157851 ENSGT00390000008798.d ENSGT00940000156635 ENSGT00940000158879 ENSGT00390000015361 ENSGT00530000063727.A ENSGT00390000014549 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 Theria ANCESTRAL SPECIES 21 ENSGT00390000014293.b ENSGT00940000159732 ENSGT00940000156754.a.a ##7 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b Eutheria ANCESTRAL SPECIES 35 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.a ##7 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000168812 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT00940000158057 Boreoeutheria ANCESTRAL SPECIES 16 ENSGT00940000159732 ENSGT00940000156754.a.a ##7 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b.l #26 ENSGT00910000147005 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 Euarchontoglires ANCESTRAL SPECIES 16 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00910000147005 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 Euarchontoglires_A ANCESTRAL SPECIES 15 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 Glires ANCESTRAL SPECIES 16 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 Rodentia ANCESTRAL SPECIES 16 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 Rodentia_B ANCESTRAL SPECIES 10 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000160066 ENSGT00940000161964 ENSGT00940000153692.B ENSGT00950000183015.B.b ENSGT00940000155684 Myomorpha ANCESTRAL SPECIES 15 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000160066 ENSGT00940000161964 ENSGT00940000153692.B ENSGT00950000183015.B.b ENSGT00940000155684 Muroidea ANCESTRAL SPECIES 62 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00860000135876 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 Muroidea_A ANCESTRAL SPECIES 10 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00860000135876 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 Murinae ANCESTRAL SPECIES 26 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00860000135876 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 Mus ANCESTRAL SPECIES 8 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000153181.z.g.b.b #15 ENSGT00940000153181.z.g.b.a #16 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00860000136039 #21 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00860000135882 #33 ENSGT00860000135876 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Mus_A ANCESTRAL SPECIES 12 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000153181.z.g.b.b #15 ENSGT00940000153181.z.g.b.a #16 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00860000136039 #21 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00860000135882 #33 ENSGT00860000135876 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Mus_B ANCESTRAL SPECIES 11 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000153181.z.g.b.b #15 ENSGT00940000153181.z.g.b.a #16 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00860000136039 #21 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00860000135882 #33 ENSGT00860000135876 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Mouse MODERN SPECIES 5 Nrg3 (ENSMUSG00000041014) #7 Ghitm (ENSMUSG00000041028) #8 Gpr15lg (ENSMUSG00000096001) #9 Cdhr1 (ENSMUSG00000021803) #10 Lrit2 (ENSMUSG00000043418) #11 Lrit1 (ENSMUSG00000041044) #12 Rgr (ENSMUSG00000021804) #13 Ccser2 (ENSMUSG00000058690) #14 4930474N05Rik (ENSMUSG00000096405) #15 4930596D02Rik (ENSMUSG00000041068) #16 Grid1 (ENSMUSG00000041078) #17 Wapl (ENSMUSG00000041408) #18 Opn4 (ENSMUSG00000021799) #19 Ldb3 (ENSMUSG00000021798) #20 9230112D13Rik (ENSMUSG00000021797) #21 Bmpr1a (ENSMUSG00000021796) #22 Mmrn2 (ENSMUSG00000041445) #23 Sncg (ENSMUSG00000023064) #24 Fam25c (ENSMUSG00000043681) #25 Glud1 (ENSMUSG00000021794) #26 Shld2 (ENSMUSG00000041471) #27 Syt15 (ENSMUSG00000041479) #28 Gprin2 (ENSMUSG00000071531) #29 Npy4r (ENSMUSG00000048337) #30 Anxa8 (ENSMUSG00000021950) #31 Antxrl (ENSMUSG00000047441) #32 A630023A22Rik (ENSMUSG00000095493) #33 Gm5460 (ENSMUSG00000072624) #34 Gm30083 (ENSMUSG00000115726) #35 Zfp488 (ENSMUSG00000044519) #36 Rbp3 (ENSMUSG00000041534) #37 Mus_C ANCESTRAL SPECIES 26 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000153181.z.g.b.a #16 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00860000136039 #21 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00860000135882 #33 ENSGT00860000135876 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 spretus MODERN SPECIES 5 Nrg3 (MGP_SPRETEiJ_G0020022) #7 Ghitm (MGP_SPRETEiJ_G0020021) #8 Gpr15lg (MGP_SPRETEiJ_G0020020) #9 Cdhr1 (MGP_SPRETEiJ_G0020019) #10 Lrit2 (MGP_SPRETEiJ_G0020018) #11 Lrit1 (MGP_SPRETEiJ_G0020017) #12 Rgr (MGP_SPRETEiJ_G0020016) #13 Ccser2 (MGP_SPRETEiJ_G0020015) #14 4930474N05Rik (MGP_SPRETEiJ_G0020014) #15 4930596D02Rik (MGP_SPRETEiJ_G0020013) #16 Grid1 (MGP_SPRETEiJ_G0020012) #17 Wapl (MGP_SPRETEiJ_G0020011) #18 Opn4 (MGP_SPRETEiJ_G0020010) #19 Ldb3 (MGP_SPRETEiJ_G0020009) #20 MGP_SPRETEiJ_G0020008 #21 Bmpr1a (MGP_SPRETEiJ_G0020007) #22 Mmrn2 (MGP_SPRETEiJ_G0020006) #23 Sncg (MGP_SPRETEiJ_G0020005) #24 Fam25c (MGP_SPRETEiJ_G0020004) #25 Glud1 (MGP_SPRETEiJ_G0020003) #26 Shld2 (MGP_SPRETEiJ_G0020002) #27 Syt15 (MGP_SPRETEiJ_G0020001) #28 Gprin2 (MGP_SPRETEiJ_G0020000) #29 Npy4r (MGP_SPRETEiJ_G0019999) #30 Anxa8 (MGP_SPRETEiJ_G0019998) #31 Antxrl (MGP_SPRETEiJ_G0019997) #32 A630023A22Rik (MGP_SPRETEiJ_G0019996) #33 MGP_SPRETEiJ_G0019995 Zfp488 (MGP_SPRETEiJ_G0019994) #36 Rbp3 (MGP_SPRETEiJ_G0019993) #37 Gdf2 (MGP_SPRETEiJ_G0019992) Steppe mouse MODERN SPECIES 3172 Wapl (ENSMSIG00000028406) #18 Opn4 (ENSMSIG00000028439) #19 Ldb3 (ENSMSIG00000028460) #20 9230112D13Rik (ENSMSIG00000028580) #21 Bmpr1a (ENSMSIG00000028586) #22 Mmrn2 (ENSMSIG00000028602) #23 ENSMSIG00000028610 #24 ENSMSIG00000028614 #25 Glud1 (ENSMSIG00000028620) #26 ENSMSIG00000028637 C8b (ENSMSIG00000028644) C8a (ENSMSIG00000028660) Fyb2 (ENSMSIG00000028687) Prkaa2 (ENSMSIG00000028721) Plpp3 (ENSMSIG00000028724) ENSMSIG00000028731 ENSMSIG00000028734 Usp24 (ENSMSIG00000028765) Pcsk9 (ENSMSIG00000028827) Bsnd (ENSMSIG00000028832) Ryukyu mouse MODERN SPECIES 5 Nrg3 (MGP_CAROLIEiJ_G0019136) #7 Ghitm (MGP_CAROLIEiJ_G0019135) #8 Gpr15lg (MGP_CAROLIEiJ_G0019134) #9 Cdhr1 (MGP_CAROLIEiJ_G0019133) #10 Lrit2 (MGP_CAROLIEiJ_G0019132) #11 Lrit1 (MGP_CAROLIEiJ_G0019131) #12 Rgr (MGP_CAROLIEiJ_G0019130) #13 Ccser2 (MGP_CAROLIEiJ_G0019129) #14 MGP_CAROLIEiJ_G0019128 4930596D02Rik (MGP_CAROLIEiJ_G0019127) #16 Grid1 (MGP_CAROLIEiJ_G0019126) #17 Wapl (MGP_CAROLIEiJ_G0019125) #18 Opn4 (MGP_CAROLIEiJ_G0019124) #19 Ldb3 (MGP_CAROLIEiJ_G0019123) #20 9230112D13Rik (MGP_CAROLIEiJ_G0019122) #21 Bmpr1a (MGP_CAROLIEiJ_G0019121) #22 Mmrn2 (MGP_CAROLIEiJ_G0019120) #23 Sncg (MGP_CAROLIEiJ_G0019119) #24 Fam25c (MGP_CAROLIEiJ_G0019118) #25 Glud1 (MGP_CAROLIEiJ_G0019117) #26 Shld2 (MGP_CAROLIEiJ_G0019116) #27 Syt15 (MGP_CAROLIEiJ_G0019115) #28 Gprin2 (MGP_CAROLIEiJ_G0019114) #29 Npy4r (MGP_CAROLIEiJ_G0019113) #30 Anxa8 (MGP_CAROLIEiJ_G0019112) #31 Antxrl (MGP_CAROLIEiJ_G0019111) #32 MGP_CAROLIEiJ_G0019110 #33 MGP_CAROLIEiJ_G0019109 Zfp488 (MGP_CAROLIEiJ_G0019108) #36 Rbp3 (MGP_CAROLIEiJ_G0019107) #37 Gdf2 (MGP_CAROLIEiJ_G0019106) Shrew mouse MODERN SPECIES 21 Sh2d4b (MGP_PahariEiJ_G0030153) Nrg3 (MGP_PahariEiJ_G0030152) #7 Ghitm (MGP_PahariEiJ_G0030151) #8 Gpr15lg (MGP_PahariEiJ_G0030150) #9 Cdhr1 (MGP_PahariEiJ_G0030149) #10 Lrit2 (MGP_PahariEiJ_G0030148) #11 Lrit1 (MGP_PahariEiJ_G0030147) #12 Rgr (MGP_PahariEiJ_G0030146) #13 Ccser2 (MGP_PahariEiJ_G0030145) #14 4930596D02Rik (MGP_PahariEiJ_G0030144) #16 Grid1 (MGP_PahariEiJ_G0030143) #17 Wapl (MGP_PahariEiJ_G0030142) #18 Opn4 (MGP_PahariEiJ_G0030141) #19 Ldb3 (MGP_PahariEiJ_G0030140) #20 MGP_PahariEiJ_G0030139 #21 Bmpr1a (MGP_PahariEiJ_G0030138) #22 Mmrn2 (MGP_PahariEiJ_G0030137) #23 Sncg (MGP_PahariEiJ_G0030136) #24 Fam25c (MGP_PahariEiJ_G0030135) #25 Glud1 (MGP_PahariEiJ_G0030134) #26 Shld2 (MGP_PahariEiJ_G0030133) #27 Syt15 (MGP_PahariEiJ_G0030132) #28 Gprin2 (MGP_PahariEiJ_G0030131) #29 Npy4r (MGP_PahariEiJ_G0030130) #30 Anxa8 (MGP_PahariEiJ_G0030129) #31 Antxrl (MGP_PahariEiJ_G0030128) #32 MGP_PahariEiJ_G0030127 #33 MGP_PahariEiJ_G0030126 Zfp488 (MGP_PahariEiJ_G0030125) #36 Rbp3 (MGP_PahariEiJ_G0030124) #37 Gdf2 (MGP_PahariEiJ_G0030123) Rat MODERN SPECIES 7 Ralgds-ps4 (ENSRNOG00000056463) #15 RGD1559508 (ENSRNOG00000056897) LOC108353078 (ENSRNOG00000063316) #15 ENSRNOG00000066563 AABR07036505.1 (ENSRNOG00000052647) #15 RGD1559508 (ENSRNOG00000068580) #15 LOC102551632 (ENSRNOG00000066408) #15 LOC120097482 (ENSRNOG00000065913) #15 RGD1565329 (ENSRNOG00000063129) #15 LOC100363883 (ENSRNOG00000069329) #15 Rpl38-ps9 (ENSRNOG00000049047) Grid1 (ENSRNOG00000055499) #17 Wapl (ENSRNOG00000052513) #18 Opn4 (ENSRNOG00000053893) #19 Ldb3 (ENSRNOG00000059166) #20 Bmpr1a (ENSRNOG00000052469) #22 Mmrn2 (ENSRNOG00000051977) #23 Sncg (ENSRNOG00000058006) #24 Fam25a (ENSRNOG00000055025) #25 Glud1 (ENSRNOG00000057367) #26 Shld2 (ENSRNOG00000059057) #27 Syt15 (ENSRNOG00000051688) #28 Gprin2 (ENSRNOG00000055042) #29 Npy4r (ENSRNOG00000061026) #30 Anxa8 (ENSRNOG00000060949) #31 Antxrl (ENSRNOG00000052152) #32 LOC681303 (ENSRNOG00000055677) #32 LOC100910026 (ENSRNOG00000060767) #32 Zfp488 (ENSRNOG00000057542) #36 Rbp3 (ENSRNOG00000051911) #37 Gdf2 (ENSRNOG00000057751) Cricetidae ANCESTRAL SPECIES 31 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00860000135876 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 Cricetidae_B ANCESTRAL SPECIES 42 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00860000135876 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 Northern American deer mouse MODERN SPECIES 22 Tspan14 (ENSPEMG00000011034) Sh2d4b (ENSPEMG00000013526) Nrg3 (ENSPEMG00000015743) #7 ENSPEMG00000028531 Ghitm (ENSPEMG00000011507) #8 Gpr15lg (ENSPEMG00000031307) #9 Cdhr1 (ENSPEMG00000012705) #10 Lrit2 (ENSPEMG00000013429) #11 Lrit1 (ENSPEMG00000010398) #12 Rgr (ENSPEMG00000011697) #13 Ccser2 (ENSPEMG00000028286) #14 Grid1 (ENSPEMG00000018243) #17 Wapl (ENSPEMG00000000112) #18 Opn4 (ENSPEMG00000000452) #19 Ldb3 (ENSPEMG00000008228) #20 Bmpr1a (ENSPEMG00000010865) #22 Mmrn2 (ENSPEMG00000011426) #23 Sncg (ENSPEMG00000011806) #24 Fam25c (ENSPEMG00000011914) #25 Glud1 (ENSPEMG00000012186) #26 Shld2 (ENSPEMG00000012743) #27 Syt15 (ENSPEMG00000013101) #28 Gprin2 (ENSPEMG00000013767) #29 Npy4r (ENSPEMG00000028618) #30 Anxa8 (ENSPEMG00000005656) #31 Zfp488 (ENSPEMG00000024926) #36 Rbp3 (ENSPEMG00000009222) #37 Gdf2 (ENSPEMG00000026964) Gdf10 (ENSPEMG00000010173) Ptpn20 (ENSPEMG00000010655) Frmpd2 (ENSPEMG00000029159) Prairie vole MODERN SPECIES 14 Prxl2a (ENSMOCG00000003643) Tspan14 (ENSMOCG00000009804) Sh2d4b (ENSMOCG00000014832) Nrg3 (ENSMOCG00000009105) #7 Ghitm (ENSMOCG00000018145) #8 Gpr15lg (ENSMOCG00000022126) #9 Cdhr1 (ENSMOCG00000014840) #10 Lrit2 (ENSMOCG00000023010) #11 Lrit1 (ENSMOCG00000013485) #12 Rgr (ENSMOCG00000014391) #13 ENSMOCG00000017539 #14 Grid1 (ENSMOCG00000020229) #17 Wapl (ENSMOCG00000011054) #18 Opn4 (ENSMOCG00000017147) #19 Ldb3 (ENSMOCG00000014189) #20 Bmpr1a (ENSMOCG00000021387) #22 Mmrn2 (ENSMOCG00000021151) #23 Sncg (ENSMOCG00000010401) #24 Fam25c (ENSMOCG00000014277) #25 Glud1 (ENSMOCG00000015380) #26 Shld2 (ENSMOCG00000015743) #27 Gprin2 (ENSMOCG00000016766) #29 Npy4r (ENSMOCG00000017195) #30 Anxa8 (ENSMOCG00000017966) #31 Antxrl (ENSMOCG00000008271) #32 ENSMOCG00000011993 Zfp488 (ENSMOCG00000014248) #36 Rbp3 (ENSMOCG00000020177) #37 Gdf2 (ENSMOCG00000022256) Gdf10 (ENSMOCG00000005707) Ptpn20 (ENSMOCG00000007405) Cricetinae ANCESTRAL SPECIES 9 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00860000135876 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 Chinese hamster chok1gshd MODERN SPECIES 76 Tspan14 (ENSCGRG00001013610) Sh2d4b (ENSCGRG00001015755) Nrg3 (ENSCGRG00001024148) #7 Ghitm (ENSCGRG00001023033) #8 Gpr15lg (ENSCGRG00001000757) #9 Cdhr1 (ENSCGRG00001012932) #10 ENSCGRG00001016916 Lrit2 (ENSCGRG00001017784) #11 Lrit1 (ENSCGRG00001019167) #12 Rgr (ENSCGRG00001019503) #13 Ccser2 (ENSCGRG00001023404) #14 Grid1 (ENSCGRG00001015468) #17 Wapl (ENSCGRG00001021235) #18 Opn4 (ENSCGRG00001014260) #19 Ldb3 (ENSCGRG00001021355) #20 Bmpr1a (ENSCGRG00001020198) #22 Mmrn2 (ENSCGRG00001011953) #23 Sncg (ENSCGRG00001012588) #24 Fam25c (ENSCGRG00001014971) #25 Glud1 (ENSCGRG00001017808) #26 Shld2 (ENSCGRG00001009835) #27 Syt15 (ENSCGRG00001017699) #28 Gprin2 (ENSCGRG00001009141) #29 Npy4r (ENSCGRG00001005399) #30 Anxa8 (ENSCGRG00001014604) #31 Antxrl (ENSCGRG00001016703) #32 ENSCGRG00001020633 Zfp488 (ENSCGRG00001007374) #36 Rbp3 (ENSCGRG00001023548) #37 Gdf2 (ENSCGRG00001000141) Gdf10 (ENSCGRG00001013862) Golden Hamster MODERN SPECIES 691 Ghitm (ENSMAUG00000000297) #8 Gpr15lg (ENSMAUG00000001766) #9 Cdhr1 (ENSMAUG00000003853) #10 Lrit2 (ENSMAUG00000013629) #11 Lrit1 (ENSMAUG00000015062) #12 Rgr (ENSMAUG00000001037) #13 ENSMAUG00000003126 #14 Grid1 (ENSMAUG00000003072) #17 Wapl (ENSMAUG00000009735) #18 Opn4 (ENSMAUG00000012309) #19 Ldb3 (ENSMAUG00000014554) #20 Bmpr1a (ENSMAUG00000016176) #22 Mmrn2 (ENSMAUG00000017602) #23 Sncg (ENSMAUG00000014759) #24 Fam25c (ENSMAUG00000015381) #25 Glud1 (ENSMAUG00000014627) #26 Shld2 (ENSMAUG00000017850) #27 Syt15 (ENSMAUG00000017421) #28 Npy4r (ENSMAUG00000016342) #30 Anxa8 (ENSMAUG00000017444) #31 Antxrl (ENSMAUG00000019213) #32 ENSMAUG00000008138 Zfp488 (ENSMAUG00000009994) #36 Rbp3 (ENSMAUG00000000607) #37 Gdf2 (ENSMAUG00000000135) Gdf10 (ENSMAUG00000002326) Ptpn20 (ENSMAUG00000001430) Upper Galilee mountains blind mole rat MODERN SPECIES 1869 Grid1 (ENSNGAG00000011372) #17 Wapl (ENSNGAG00000016668) #18 ENSNGAG00000005178 Opn4 (ENSNGAG00000011576) #19 ENSNGAG00000010329 #20 Bmpr1a (ENSNGAG00000016693) #22 Mmrn2 (ENSNGAG00000017631) #23 Sncg (ENSNGAG00000016118) #24 Fam25c (ENSNGAG00000000481) #25 Glud1 (ENSNGAG00000000732) #26 Shld2 (ENSNGAG00000001743) #27 Lesser Egyptian jerboa MODERN SPECIES 64 Mat1a (ENSJJAG00000022624) Dydc1 (ENSJJAG00000017106) Dydc2 (ENSJJAG00000010678) Prxl2a (ENSJJAG00000021962) Tspan14 (ENSJJAG00000023639) Sh2d4b (ENSJJAG00000001387) Nrg3 (ENSJJAG00000010166) #7 ENSJJAG00000016988 #8 Cdhr1 (ENSJJAG00000019113) #10 Lrit1 (ENSJJAG00000010600) #12 Rgr (ENSJJAG00000019791) #13 Ccser2 (ENSJJAG00000010060) #14 ENSJJAG00000017435 #17 Wapl (ENSJJAG00000000624) #18 Ldb3 (ENSJJAG00000018553) #20 Bmpr1a (ENSJJAG00000021938) #22 Sncg (ENSJJAG00000011778) #24 Fam25c (ENSJJAG00000015524) #25 Glud1 (ENSJJAG00000019831) #26 Anxa8 (ENSJJAG00000013050) #31 Rbp3 (ENSJJAG00000007256) #37 Gdf2 (ENSJJAG00000018450) Gdf10 (ENSJJAG00000001148) Mapk8 (ENSJJAG00000022148) ENSJJAG00000022742 ENSJJAG00000012153 Wdfy4 (ENSJJAG00000010957) Lrrc18 (ENSJJAG00000023033) Vstm4 (ENSJJAG00000024286) Drgx (ENSJJAG00000015373) Ercc6 (ENSJJAG00000013767) Kangaroo rat MODERN SPECIES 467 Prxl2a (ENSDORG00000015928) Tspan14 (ENSDORG00000008405) Sh2d4b (ENSDORG00000008406) Nrg3 (ENSDORG00000028000) #7 ENSDORG00000001109 #8 Gpr15lg (ENSDORG00000001112) #9 Cdhr1 (ENSDORG00000001114) #10 Lrit2 (ENSDORG00000001120) #11 Lrit1 (ENSDORG00000001121) #12 Rgr (ENSDORG00000001123) #13 ENSDORG00000008217 #14 Grid1 (ENSDORG00000012308) #17 ENSDORG00000024513 #18 Opn4 (ENSDORG00000008231) #19 ENSDORG00000027341 #20 Bmpr1a (ENSDORG00000009762) #22 Mmrn2 (ENSDORG00000009763) #23 Sncg (ENSDORG00000009765) #24 Rodentia_A ANCESTRAL SPECIES 15 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 Sciuridae ANCESTRAL SPECIES 30 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000153661.b.b ENSGT00940000162142 ENSGT00940000154696 ENSGT00950000182946.c.b.a ENSGT00950000182946.c.b.b ENSGT00950000182946.d.s ENSGT00950000182946.d.t Marmotini ANCESTRAL SPECIES 16 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000153661.b.b ENSGT00940000162142 ENSGT00940000154696 ENSGT00950000182946.c.b.a ENSGT00950000182946.c.b.b ENSGT00950000182946.d.s ENSGT00950000182946.d.t Marmotini_b ANCESTRAL SPECIES 152 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00950000185837 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000153661.b.b ENSGT00940000162142 ENSGT00940000154696 ENSGT00950000182946.c.b.a ENSGT00950000182946.c.b.b ENSGT00950000182946.d.s Arctic ground squirrel MODERN SPECIES 178 GHITM (ENSUPAG00010006232) #8 CDHR1 (ENSUPAG00010006210) #10 LRIT2 (ENSUPAG00010006207) #11 LRIT1 (ENSUPAG00010006198) #12 RGR (ENSUPAG00010006165) #13 CCSER2 (ENSUPAG00010006005) #14 GRID1 (ENSUPAG00010005966) #17 WAPL (ENSUPAG00010005918) #18 OPN4 (ENSUPAG00010005910) #19 LDB3 (ENSUPAG00010005554) #20 BMPR1A (ENSUPAG00010005548) #22 MMRN2 (ENSUPAG00010005542) #23 SNCG (ENSUPAG00010005534) #24 ADIRF (ENSUPAG00010005531) ENSUPAG00010005527 SHLD2 (ENSUPAG00010005519) #27 ENSUPAG00010005491 #28 GPRIN2 (ENSUPAG00010005486) #29 ENSUPAG00010005485 CH25H (ENSUPAG00010005477) LIPA (ENSUPAG00010005464) ENSUPAG00010005461 IFIT2 (ENSUPAG00010005455) IFIT3 (ENSUPAG00010005450) Squirrel MODERN SPECIES 404 GRID1 (ENSSTOG00000015957) #17 WAPL (ENSSTOG00000003297) #18 OPN4 (ENSSTOG00000003353) #19 LDB3 (ENSSTOG00000003375) #20 BMPR1A (ENSSTOG00000015838) #22 MMRN2 (ENSSTOG00000019899) #23 SNCG (ENSSTOG00000015859) #24 Alpin marmot MODERN SPECIES 66 PRXL2A (ENSMMMG00000010895) TSPAN14 (ENSMMMG00000010918) SH2D4B (ENSMMMG00000010944) NRG3 (ENSMMMG00000010985) #7 GHITM (ENSMMMG00000011060) #8 GPR15LG (ENSMMMG00000011077) #9 CDHR1 (ENSMMMG00000011089) #10 LRIT2 (ENSMMMG00000011116) #11 LRIT1 (ENSMMMG00000011121) #12 RGR (ENSMMMG00000011130) #13 CCSER2 (ENSMMMG00000011155) #14 GRID1 (ENSMMMG00000011366) #17 WAPL (ENSMMMG00000011412) #18 OPN4 (ENSMMMG00000011474) #19 LDB3 (ENSMMMG00000011480) #20 BMPR1A (ENSMMMG00000011964) #22 MMRN2 (ENSMMMG00000011988) #23 SNCG (ENSMMMG00000012000) #24 ADIRF (ENSMMMG00000012010) ENSMMMG00000012011 #25 ENSMMMG00000012018 #26 SHLD2 (ENSMMMG00000012037) #27 ENSMMMG00000012050 #28 GPRIN2 (ENSMMMG00000012057) #29 ENSMMMG00000012060 CH25H (ENSMMMG00000012067) LIPA (ENSMMMG00000012074) ENSMMMG00000012079 IFIT2 (ENSMMMG00000012130) IFIT3 (ENSMMMG00000012138) IFIT1B (ENSMMMG00000012141) Eurasian red squirrel MODERN SPECIES 13 ENSSVLG00005004095 NRG3 (ENSSVLG00005004056) #7 GHITM (ENSSVLG00005003987) #8 GPR15LG (ENSSVLG00005003966) #9 CDHR1 (ENSSVLG00005003916) #10 LRIT2 (ENSSVLG00005003885) #11 LRIT1 (ENSSVLG00005003867) #12 RGR (ENSSVLG00005003817) #13 CCSER2 (ENSSVLG00005003778) #14 ENSSVLG00005003751 GRID1 (ENSSVLG00005003709) #17 WAPL (ENSSVLG00005003658) #18 OPN4 (ENSSVLG00005003591) #19 LDB3 (ENSSVLG00005003371) #20 ENSSVLG00005003290 BMPR1A (ENSSVLG00005003269) #22 MMRN2 (ENSSVLG00005003238) #23 SNCG (ENSSVLG00005003209) #24 ADIRF (ENSSVLG00005003188) ENSSVLG00005003177 ENSSVLG00005003158 #25 ENSSVLG00005003124 #26 ENSSVLG00005003056 #27 ENSSVLG00005003008 #28 GPRIN2 (ENSSVLG00005002992) #29 ENSSVLG00005002980 ENSSVLG00005002964 CH25H (ENSSVLG00005002954) ENSSVLG00005002938 LIPA (ENSSVLG00005002910) ENSSVLG00005002898 Hystricomorpha ANCESTRAL SPECIES 56 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000000854.c.b.k.b.a.b ##26 ENSGT00390000003133 #27 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000160066 Hystricomorpha_a ANCESTRAL SPECIES 62 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT01030000237896 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000000854.c.b.k.b.a.b ##26 ENSGT00390000003133 #27 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000160066 Guinea pig MODERN SPECIES 62 PRXL2A (ENSCPOG00000006552) TSPAN14 (ENSCPOG00000009896) SH2D4B (ENSCPOG00000003471) NRG3 (ENSCPOG00000012186) #7 GHITM (ENSCPOG00000006432) #8 ENSCPOG00000034121 CDHR1 (ENSCPOG00000005235) #10 LRIT2 (ENSCPOG00000015390) #11 LRIT1 (ENSCPOG00000015393) #12 RGR (ENSCPOG00000022556) #13 CCSER2 (ENSCPOG00000003617) #14 GRID1 (ENSCPOG00000010412) #17 WAPL (ENSCPOG00000012961) #18 OPN4 (ENSCPOG00000001026) #19 LDB3 (ENSCPOG00000025115) #20 BMPR1A (ENSCPOG00000026650) #22 SNCG (ENSCPOG00000023463) #24 ENSCPOG00000019581 #25 ENSCPOG00000005166 #26 SHLD2 (ENSCPOG00000001099) #27 GPRIN2 (ENSCPOG00000032327) #29 Ppyr1 (ENSCPOG00000006445) #30 ENSCPOG00000002522 #31 ZNF488 (ENSCPOG00000000536) #36 RBP3 (ENSCPOG00000032678) #37 GDF2 (ENSCPOG00000012131) GDF10 (ENSCPOG00000004358) MAPK8 (ENSCPOG00000038234) ARHGAP22 (ENSCPOG00000015342) LRRC18 (ENSCPOG00000021217) WDFY4 (ENSCPOG00000026208) Hystricomorpha_b ANCESTRAL SPECIES 87 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT01030000237896 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.b.a.b ##26 ENSGT00390000003133 #27 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000160066 ENSGT00940000161964 Degu MODERN SPECIES 173 ENSODEG00000012959 ENSODEG00000011340 #8 ENSODEG00000012481 CDHR1 (ENSODEG00000010766) #10 LRIT2 (ENSODEG00000011609) #11 LRIT1 (ENSODEG00000012611) #12 RGR (ENSODEG00000011393) #13 CCSER2 (ENSODEG00000010793) #14 GRID1 (ENSODEG00000011958) #17 ENSODEG00000011516 #18 ENSODEG00000019892 ENSODEG00000011721 OPN4 (ENSODEG00000011887) #19 ENSODEG00000011383 #20 ENSODEG00000019882 BMPR1A (ENSODEG00000011436) #22 ENSODEG00000012425 SNCG (ENSODEG00000012548) #24 ENSODEG00000012123 #25 ENSODEG00000011593 ##26 SHLD2 (ENSODEG00000012114) #27 ENSODEG00000020251 #30 ENSODEG00000011514 #31 ZNF488 (ENSODEG00000011943) #36 RBP3 (ENSODEG00000012586) #37 GDF2 (ENSODEG00000012030) GDF10 (ENSODEG00000012015) ENSODEG00000012226 Long-tailed chinchilla MODERN SPECIES 217 PRXL2A (ENSCLAG00000000254) TSPAN14 (ENSCLAG00000000279) SH2D4B (ENSCLAG00000000290) NRG3 (ENSCLAG00000001117) #7 GHITM (ENSCLAG00000000416) #8 ENSCLAG00000000449 CDHR1 (ENSCLAG00000000482) #10 LRIT2 (ENSCLAG00000000247) #11 LRIT1 (ENSCLAG00000000263) #12 RGR (ENSCLAG00000000310) #13 CCSER2 (ENSCLAG00000000521) #14 GRID1 (ENSCLAG00000000120) #17 WAPL (ENSCLAG00000000189) #18 OPN4 (ENSCLAG00000000204) #19 LDB3 (ENSCLAG00000000336) #20 BMPR1A (ENSCLAG00000000743) #22 MMRN2 (ENSCLAG00000000878) #23 SNCG (ENSCLAG00000000913) #24 ENSCLAG00000000921 #25 ENSCLAG00000000135 ##26 SHLD2 (ENSCLAG00000000158) #27 GPRIN2 (ENSCLAG00000017398) #29 ENSCLAG00000017395 #30 ENSCLAG00000000172 #31 ENSCLAG00000000180 #32 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 7 ENSHGLG00000036050 OGDHL (ENSHGLG00000001655) ENSHGLG00000002348 CHAT (ENSHGLG00000000867) SLC18A3 (ENSHGLG00000020633) ERCC6 (ENSHGLG00000000923) DRGX (ENSHGLG00000033413) C10orf71 (ENSHGLG00000020256) FAM170B (ENSHGLG00000045738) VSTM4 (ENSHGLG00000001022) WDFY4 (ENSHGLG00000001195) LRRC18 (ENSHGLG00000001458) ENSHGLG00000001532 ENSHGLG00000001658 ENSHGLG00000039539 ENSHGLG00000004727 #22 ENSHGLG00000008259 #23 SNCG (ENSHGLG00000007942) #24 FAM25C (ENSHGLG00000044226) #25 GLUD1 (ENSHGLG00000006984) ##26 ENSHGLG00000047629 ENSHGLG00000020126 ENSHGLG00000005172 #27 ENSHGLG00000036796 ENSHGLG00000039819 ENSHGLG00000040895 ENSHGLG00000036532 ENSHGLG00000042445 ENSHGLG00000020003 ENSHGLG00000037312 ENSHGLG00000034580 Naked mole-rat female MODERN SPECIES 10 ZNF326 (ENSHGLG00000004782) ENSHGLG00000040937 ENSHGLG00000032341 ENSHGLG00000009126 ENSHGLG00000041803 ZNF644 (ENSHGLG00000008786) HFM1 (ENSHGLG00000007780) CDC7 (ENSHGLG00000046565) ENSHGLG00000004997 ENSHGLG00000046123 BRDT (ENSHGLG00000004317) ENSHGLG00000010230 ENSHGLG00000033060 ENSHGLG00000046149 BTBD8 (ENSHGLG00000008571) ENSHGLG00000012851 #22 ENSHGLG00000012510 ENSHGLG00000011940 RPAP2 (ENSHGLG00000009983) ENSHGLG00000046873 GFI1 (ENSHGLG00000008020) ENSHGLG00000047533 EVI5 (ENSHGLG00000005267) ENSHGLG00000006656 ENSHGLG00000004717 ENSHGLG00000004684 ENSHGLG00000045561 ENSHGLG00000049269 ENSHGLG00000007932 ENSHGLG00000006551 ENSHGLG00000032551 Lagomorpha ANCESTRAL SPECIES 198 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 Rabbit MODERN SPECIES 9 ENSOCUG00000023496 ENSOCUG00000022799 ZFAND4 (ENSOCUG00000027810) MARCHF8 (ENSOCUG00000005434) ALOX5 (ENSOCUG00000005428) ENSOCUG00000014073 ENSOCUG00000031390 ENSOCUG00000037390 ENSOCUG00000036486 ENSOCUG00000024290 ENSOCUG00000037261 GRID1 (ENSOCUG00000012865) #17 WAPL (ENSOCUG00000016503) #18 OPN4 (ENSOCUG00000017574) #19 LDB3 (ENSOCUG00000012693) #20 BMPR1A (ENSOCUG00000016925) #22 MMRN2 (ENSOCUG00000016936) #23 SNCG (ENSOCUG00000013292) #24 ENSOCUG00000016943 #25 ENSOCUG00000008518 #26 SHLD2 (ENSOCUG00000004390) #27 ENSOCUG00000004393 #28 GPRIN2 (ENSOCUG00000005728) #29 NPY4R (ENSOCUG00000014188) #30 ANXA8 (ENSOCUG00000014189) #31 ENSOCUG00000009721 #32 ENSOCUG00000024476 #32 ENSOCUG00000023411 ENSOCUG00000012472 POLR3A (ENSOCUG00000012450) DLG5 (ENSOCUG00000002180) Pika MODERN SPECIES 8536 BMPR1A (ENSOPRG00000014900) #22 ENSOPRG00000014916 #23 SNCG (ENSOPRG00000014928) #24 Tree shrew MODERN SPECIES 220 ENSTBEG00000002941 #22 ENSTBEG00000003805 #23 ENSTBEG00000005239 ##26 Primates ANCESTRAL SPECIES 16 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00910000147005 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00940000154371.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b Haplorrhini ANCESTRAL SPECIES 11 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00910000147005 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00940000154371.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b Simiiformes ANCESTRAL SPECIES 17 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00390000016470.d ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00910000147315 ENSGT00910000147005 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 Catarrhini ANCESTRAL SPECIES 18 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00390000016470.d ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00910000147315 ENSGT00910000147005 ENSGT00940000163475 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a.a.a ##26 ENSGT00390000003133.j #27 ENSGT00390000000854.c.b.k.a.b ##26 ENSGT00390000003133.i #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 Hominoidea ANCESTRAL SPECIES 11 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00390000016470.d ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00910000147390 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00910000147315 ENSGT00910000147005 ENSGT00940000154371.b ENSGT00390000008403.y.a ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT00940000158057 ENSGT00940000159008 Hominidae ANCESTRAL SPECIES 13 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00390000016470.d ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00910000147390 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00910000147315 ENSGT00910000147005 ENSGT00940000154371.b ENSGT00390000008403.y.a ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT00940000158057 ENSGT00940000159008 Homo/Pan/Gorilla group ANCESTRAL SPECIES 17 ENSGT00860000136117.a ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00390000016470.d ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00910000147390 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00910000147315 ENSGT00910000147005 ENSGT00910000146846.c.a ENSGT00410000025793.b.s.a.a ENSGT00390000018409 ENSGT00390000009613.a ENSGT00550000074823.a.g ENSGT00940000163053.b ENSGT00560000078481 ENSGT00940000154335.b ENSGT00390000016052 ENSGT00940000163386 Homo/Pan group DUPLICATION Homo/Pan group ANCESTRAL SPECIES 18 ENSGT00860000136117.a ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00390000016470.d ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00910000147390 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225.a #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00910000147315 ENSGT00910000147005 ENSGT00910000146846.c.a ENSGT00410000025793.b.s.a.a ENSGT00390000018409 ENSGT00390000009613.a ENSGT00550000074823.a.g ENSGT00940000163053.b ENSGT00560000078481 ENSGT00940000154335.b ENSGT00390000016052 ENSGT00940000163386 Pan ANCESTRAL SPECIES 16 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00390000016470.d ENSGT00940000153912.A #14 ENSGT00390000018433.t ENSGT00940000155910 #17 ENSGT00910000147390 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225.a #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00910000147315 ENSGT00910000147005 ENSGT00390000018409 ENSGT00390000009613.a ENSGT00550000074823.a.g ENSGT00940000163053.b ENSGT00560000078481 ENSGT00940000154335.b ENSGT00390000016052 ENSGT00940000163386 ENSGT00940000161066 ENSGT00940000160031 Bonobo MODERN SPECIES 1 NRG3 (ENSPPAG00000033661) #7 GHITM (ENSPPAG00000014417) #8 GPR15LG (ENSPPAG00000042583) #9 CDHR1 (ENSPPAG00000011798) #10 LRIT2 (ENSPPAG00000029485) #11 LRIT1 (ENSPPAG00000037063) #12 RGR (ENSPPAG00000040412) #13 CCSER2 (ENSPPAG00000030875) #14 ENSPPAG00000039131 ENSPPAG00000037444 GRID1 (ENSPPAG00000030566) #17 ENSPPAG00000029420 WAPL (ENSPPAG00000040644) #18 OPN4 (ENSPPAG00000041649) #19 LDB3 (ENSPPAG00000038538) #20 BMPR1A (ENSPPAG00000039780) #22 MMRN2 (ENSPPAG00000031202) #23 ENSPPAG00000032223 #24 ADIRF (ENSPPAG00000002928) ENSPPAG00000042052 ENSPPAG00000008830 ENSPPAG00000037710 MINPP1 (ENSPPAG00000043233) PAPSS2 (ENSPPAG00000001750) ATAD1 (ENSPPAG00000043577) PTEN (ENSPPAG00000029313) RNLS (ENSPPAG00000024280) LIPJ (ENSPPAG00000035538) LIPF (ENSPPAG00000028504) LIPK (ENSPPAG00000031559) LIPN (ENSPPAG00000034641) Chimpanzee MODERN SPECIES 1 NRG3 (ENSPTRG00000002689) #7 GHITM (ENSPTRG00000002691) #8 GPR15LG (ENSPTRG00000002692) #9 CDHR1 (ENSPTRG00000002693) #10 LRIT2 (ENSPTRG00000029854) #11 LRIT1 (ENSPTRG00000002694) #12 RGR (ENSPTRG00000002695) #13 CCSER2 (ENSPTRG00000002697) #14 ENSPTRG00000052496 ENSPTRG00000045771 GRID1 (ENSPTRG00000002700) #17 ENSPTRG00000051280 WAPL (ENSPTRG00000002702) #18 OPN4 (ENSPTRG00000002704) #19 LDB3 (ENSPTRG00000002705) #20 BMPR1A (ENSPTRG00000002706) #22 MMRN2 (ENSPTRG00000002707) #23 SNCG (ENSPTRG00000002708) #24 ADIRF (ENSPTRG00000002709) ENSPTRG00000049922 ENSPTRG00000047193 ENSPTRG00000043199 ENSPTRG00000002635 FAM25A (ENSPTRG00000046441) #25 GLUD1 (ENSPTRG00000002711) ##26 SHLD2 (ENSPTRG00000002465) #27 ENSPTRG00000047799 ENSPTRG00000046269 MINPP1 (ENSPTRG00000002715) PAPSS2 (ENSPTRG00000023677) ATAD1 (ENSPTRG00000002717) Human MODERN SPECIES 1 TSPAN14 (ENSG00000108219) SH2D4B (ENSG00000178217) NRG3 (ENSG00000185737) #7 GHITM (ENSG00000165678) #8 GPR15LG (ENSG00000188373) #9 CDHR1 (ENSG00000148600) #10 LRIT2 (ENSG00000204033) #11 RGR (ENSG00000148604) #13 LRIT1 (ENSG00000148602) #12 CCSER2 (ENSG00000107771) #14 GRID1 (ENSG00000182771) #17 WAPL (ENSG00000062650) #18 OPN4 (ENSG00000122375) #19 ENSG00000289258 LDB3 (ENSG00000122367) #20 BMPR1A (ENSG00000107779) #22 MMRN2 (ENSG00000173269) #23 SNCG (ENSG00000173267) #24 ADIRF (ENSG00000148671) FAM25A (ENSG00000188100) #25 GLUD1 (ENSG00000148672) ##26 SHLD2 (ENSG00000122376) #27 NUTM2A (ENSG00000184923) NUTM2D (ENSG00000214562) MINPP1 (ENSG00000107789) PAPSS2 (ENSG00000198682) ATAD1 (ENSG00000138138) KLLN (ENSG00000227268) PTEN (ENSG00000171862) ENSG00000289051 RNLS (ENSG00000184719) Homo/Pan group ANCESTRAL SPECIES ENSGT00940000156225.b #22 Pan ANCESTRAL SPECIES ENSGT00940000156225.b #22 Chimpanzee MODERN SPECIES 19 MOXD1 (ENSPTRG00000018606) CCN2 (ENSPTRG00000046307) ENPP1 (ENSPTRG00000018603) ENPP3 (ENSPTRG00000023128) MED23 (ENSPTRG00000018601) ARG1 (ENSPTRG00000018600) ENSPTRG00000046619 AKAP7 (ENSPTRG00000018599) EPB41L2 (ENSPTRG00000018597) SMLR1 (ENSPTRG00000043644) TMEM200A (ENSPTRG00000018596) SAMD3 (ENSPTRG00000018594) L3MBTL3 (ENSPTRG00000023858) TMEM244 (ENSPTRG00000029415) ARHGAP18 (ENSPTRG00000018591) ENSPTRG00000040684 #22 ENSPTRG00000044905 LAMA2 (ENSPTRG00000018588) PTPRK (ENSPTRG00000018587) THEMIS (ENSPTRG00000018586) C6H6orf58 (ENSPTRG00000018584) SOGA3 (ENSPTRG00000018582) KIAA0408 (ENSPTRG00000034180) ENSPTRG00000048027 ECHDC1 (ENSPTRG00000018580) RNF146 (ENSPTRG00000018579) RSPO3 (ENSPTRG00000018578) CENPW (ENSPTRG00000044162) ENSPTRG00000047650 TRMT11 (ENSPTRG00000018577) HINT3 (ENSPTRG00000018576) Gorilla MODERN SPECIES 1 ENSGGOG00000036412 NRG3 (ENSGGOG00000011517) #7 GHITM (ENSGGOG00000011008) #8 C10orf99 (ENSGGOG00000012510) #9 CDHR1 (ENSGGOG00000012764) #10 LRIT2 (ENSGGOG00000012781) #11 LRIT1 (ENSGGOG00000012795) #12 RGR (ENSGGOG00000012798) #13 CCSER2 (ENSGGOG00000003034) #14 RPS3A (ENSGGOG00000027203) GRID1 (ENSGGOG00000012289) #17 ENSGGOG00000038056 WAPL (ENSGGOG00000015781) #18 OPN4 (ENSGGOG00000013063) #19 LDB3 (ENSGGOG00000013070) #20 BMPR1A (ENSGGOG00000003720) #22 MMRN2 (ENSGGOG00000009082) #23 ENSGGOG00000009093 #24 ADIRF (ENSGGOG00000024607) ENSGGOG00000042297 ENSGGOG00000036535 ENSGGOG00000015764 #25 GLUD1 (ENSGGOG00000015770) ##26 ENSGGOG00000043476 #27 ENSGGOG00000042516 ENSGGOG00000037293 ENSGGOG00000027174 MINPP1 (ENSGGOG00000007426) PAPSS2 (ENSGGOG00000005369) ATAD1 (ENSGGOG00000026651) KLLN (ENSGGOG00000025668) Orangutan MODERN SPECIES 1 TSPAN14 (ENSPPYG00000002287) SH2D4B (ENSPPYG00000002286) NRG3 (ENSPPYG00000032077) #7 ENSPPYG00000002282 GHITM (ENSPPYG00000002280) #8 GPR15LG (ENSPPYG00000002279) #9 CDHR1 (ENSPPYG00000002278) #10 LRIT2 (ENSPPYG00000002277) #11 LRIT1 (ENSPPYG00000002276) #12 RGR (ENSPPYG00000002275) #13 CCSER2 (ENSPPYG00000002274) #14 GRID1 (ENSPPYG00000002273) #17 WAPL (ENSPPYG00000029542) #18 OPN4 (ENSPPYG00000002272) #19 LDB3 (ENSPPYG00000002271) #20 BMPR1A (ENSPPYG00000002270) #22 MMRN2 (ENSPPYG00000002269) #23 ENSPPYG00000002268 #24 ADIRF (ENSPPYG00000038600) ENSPPYG00000002804 ENSPPYG00000020015 ENSPPYG00000020006 ENSPPYG00000002261 NCOA4 (ENSPPYG00000002262) TIMM23 (ENSPPYG00000036786) PARG (ENSPPYG00000002259) OGDHL (ENSPPYG00000002258) C10orf53 (ENSPPYG00000032032) CHAT (ENSPPYG00000002256) SLC18A3 (ENSPPYG00000002255) ERCC6 (ENSPPYG00000002254) Gibbon MODERN SPECIES 8 ENSNLEG00000033385 GHITM (ENSNLEG00000031807) #8 GPR15LG (ENSNLEG00000010905) #9 CDHR1 (ENSNLEG00000010912) #10 LRIT2 (ENSNLEG00000010938) #11 LRIT1 (ENSNLEG00000010940) #12 RGR (ENSNLEG00000010947) #13 CCSER2 (ENSNLEG00000010963) #14 ENSNLEG00000031627 GRID1 (ENSNLEG00000002153) #17 ENSNLEG00000029226 WAPL (ENSNLEG00000002188) #18 ENSNLEG00000029687 OPN4 (ENSNLEG00000002362) #19 LDB3 (ENSNLEG00000002380) #20 BMPR1A (ENSNLEG00000002425) #22 MMRN2 (ENSNLEG00000002500) #23 ENSNLEG00000002548 #24 ADIRF (ENSNLEG00000002549) ENSNLEG00000030274 ENSNLEG00000030954 ENSNLEG00000028827 ZNF37A (ENSNLEG00000008727) ENSNLEG00000028063 ENSNLEG00000031406 ZNF33A (ENSNLEG00000008714) ZNF25 (ENSNLEG00000008708) ZNF248 (ENSNLEG00000008682) ENSNLEG00000033032 ENSNLEG00000018821 GJD4 (ENSNLEG00000018142) Cercopithecidae DUPLICATION Cercopithecidae ANCESTRAL SPECIES 15 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00390000016470.d ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225.c #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00910000147315 ENSGT00910000147005 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a.a.a ##26 ENSGT00390000003133.j #27 ENSGT00390000000854.c.b.k.a.b ##26 ENSGT00390000003133.i.b #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00860000136069 Cercopithecinae ANCESTRAL SPECIES 15 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00390000016470.d ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225.c #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a.a.a ##26 ENSGT00390000003133.j #27 ENSGT00390000000854.c.b.k.a.b ##26 ENSGT00390000003133.i.b #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00860000136069 ENSGT00390000014726 #37 ENSGT00940000159802 Vervet Monkey MODERN SPECIES 28 NRG3 (ENSCSAG00000009497) #7 ENSCSAG00000018425 GHITM (ENSCSAG00000009514) #8 GPR15LG (ENSCSAG00000009520) #9 CDHR1 (ENSCSAG00000009566) #10 LRIT2 (ENSCSAG00000009583) #11 LRIT1 (ENSCSAG00000009590) #12 RGR (ENSCSAG00000009607) #13 ENSCSAG00000018424 CCSER2 (ENSCSAG00000009619) #14 GRID1 (ENSCSAG00000009628) #17 ENSCSAG00000009636 #17 WAPL (ENSCSAG00000009646) #18 OPN4 (ENSCSAG00000009665) #19 LDB3 (ENSCSAG00000009684) #20 BMPR1A (ENSCSAG00000009694) #22 MMRN2 (ENSCSAG00000009703) #23 SNCG (ENSCSAG00000009708) #24 ADIRF (ENSCSAG00000009713) ENSCSAG00000009720 #25 GLUD1 (ENSCSAG00000009827) ##26 SHLD2 (ENSCSAG00000009879) #27 ENSCSAG00000009900 #28 GPRIN2 (ENSCSAG00000018423) #29 ENSCSAG00000018422 #30 ENSCSAG00000009920 #31 ENSCSAG00000009940 #25 ENSCSAG00000009984 #32 RBP3 (ENSCSAG00000010000) #37 GDF2 (ENSCSAG00000010006) GDF10 (ENSCSAG00000010010) Cercopithecinae_a ANCESTRAL SPECIES 14 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00390000016470.d ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00910000148314 ENSGT00940000156225.c #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00910000147315 ENSGT00910000147005 ENSGT00390000017446 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133.j #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00390000000786.e.b #25 ENSGT00860000136069 ENSGT00390000014726 #37 ENSGT00940000159802 Macaca ANCESTRAL SPECIES 11 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00550000076451.a.a.c ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00910000148314 ENSGT00940000156225.c #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00910000147315 ENSGT00910000147005 ENSGT00390000017446 ENSGT00390000000854.c.b.l #26 ENSGT00860000135488 ENSGT00940000163475.b ENSGT00390000000786.e.a #25 ENSGT00390000000854.c.b.k.a.a.a ##26 ENSGT00390000003133.j #27 ENSGT00390000003133.i.b #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 Pig-tailed macaque MODERN SPECIES 230 CDHR1 (ENSMNEG00000032695) #10 LRIT2 (ENSMNEG00000031540) #11 LRIT1 (ENSMNEG00000031262) #12 RGR (ENSMNEG00000028989) #13 ENSMNEG00000044585 ENSMNEG00000041406 CCSER2 (ENSMNEG00000034379) #14 ENSMNEG00000019766 ENSMNEG00000039674 GRID1 (ENSMNEG00000037527) #17 WAPL (ENSMNEG00000017210) #18 ENSMNEG00000029157 OPN4 (ENSMNEG00000034845) #19 LDB3 (ENSMNEG00000026237) #20 ENSMNEG00000038100 BMPR1A (ENSMNEG00000032944) #22 MMRN2 (ENSMNEG00000032168) #23 SNCG (ENSMNEG00000027910) #24 ENSMNEG00000031046 ENSMNEG00000045410 ADIRF (ENSMNEG00000033765) ENSMNEG00000029079 ENSMNEG00000044382 ##26 ENSMNEG00000036961 Macaca_a ANCESTRAL SPECIES 13 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00550000076451.a.a.c ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225.c #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00910000147315 ENSGT00390000017446 ENSGT00390000000854.c.b.l #26 ENSGT00860000135488 ENSGT00940000163475.b ENSGT00390000000786.e.a.a #25 ENSGT00390000000786.e.a.b #25 ENSGT00390000000854.c.b.k.a.a.a ##26 ENSGT00390000003133.i.b #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 Rhesus MODERN SPECIES 19 ENSMMUG00000049411 ENSMMUG00000055918 NRG3 (ENSMMUG00000017380) #7 GHITM (ENSMMUG00000018572) #8 CDHR1 (ENSMMUG00000000658) #10 LRIT2 (ENSMMUG00000000659) #11 LRIT1 (ENSMMUG00000000660) #12 RGR (ENSMMUG00000000661) #13 CCSER2 (ENSMMUG00000019720) #14 ENSMMUG00000030571 ENSMMUG00000055728 GRID1 (ENSMMUG00000023612) #17 WAPL (ENSMMUG00000003924) #18 OPN4 (ENSMMUG00000003607) #19 LDB3 (ENSMMUG00000003608) #20 BMPR1A (ENSMMUG00000011852) #22 MMRN2 (ENSMMUG00000011851) #23 SNCG (ENSMMUG00000011849) #24 ADIRF (ENSMMUG00000030573) ENSMMUG00000061731 ENSMMUG00000043246 ENSMMUG00000019677 ENSMMUG00000052696 ENSMMUG00000043859 ENSMMUG00000060843 ENSMMUG00000056811 ENSMMUG00000038867 ENSMMUG00000061975 #25 GLUD1 (ENSMMUG00000022075) ##26 SHLD2 (ENSMMUG00000013439) #27 ENSMMUG00000013441 #28 Crab-eating macaque MODERN SPECIES 19 GHITM (ENSMFAG00000043812) #8 GPR15LG (ENSMFAG00000043609) #9 CDHR1 (ENSMFAG00000001885) #10 LRIT2 (ENSMFAG00000000819) #11 LRIT1 (ENSMFAG00000000369) #12 RGR (ENSMFAG00000043610) #13 CCSER2 (ENSMFAG00000042163) #14 ENSMFAG00000045926 ENSMFAG00000048708 ENSMFAG00000055079 GRID1 (ENSMFAG00000038022) #17 WAPL (ENSMFAG00000036863) #18 OPN4 (ENSMFAG00000045517) #19 LDB3 (ENSMFAG00000026973) #20 ENSMFAG00000062102 BMPR1A (ENSMFAG00000040345) #22 SNCG (ENSMFAG00000034096) #24 ENSMFAG00000039537 ADIRF (ENSMFAG00000000477) ENSMFAG00000058508 #26 ENSMFAG00000056764 ENSMFAG00000065379 ENSMFAG00000048063 ENSMFAG00000059873 ENSMFAG00000027100 ENSMFAG00000063069 ENSMFAG00000017741 ENSMFAG00000036510 ENSMFAG00000041417 #25 GLUD1 (ENSMFAG00000043717) ##26 ENSMFAG00000003942 #27 Cercopithecinae_b ANCESTRAL SPECIES 14 ENSGT00950000183120.e.a.b.k ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00390000016470.d ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00910000148314 ENSGT00940000156225.c #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00910000147315 ENSGT00910000147005 ENSGT00390000017446 ENSGT00940000153195.B.l.i.b ENSGT00940000163475.a.b ENSGT00390000000854.c.b.k.b.b.c ##26 ENSGT00940000163475.a.a.b Olive baboon MODERN SPECIES 2 NRG3 (ENSPANG00000022613) #7 ENSPANG00000037881 GHITM (ENSPANG00000022606) #8 GPR15LG (ENSPANG00000038684) #9 CDHR1 (ENSPANG00000022602) #10 LRIT2 (ENSPANG00000022600) #11 LRIT1 (ENSPANG00000022599) #12 RGR (ENSPANG00000022598) #13 CCSER2 (ENSPANG00000022596) #14 GRID1 (ENSPANG00000022595) #17 ENSPANG00000031896 ENSPANG00000042345 WAPL (ENSPANG00000022594) #18 OPN4 (ENSPANG00000022593) #19 LDB3 (ENSPANG00000022592) #20 BMPR1A (ENSPANG00000022591) #22 MMRN2 (ENSPANG00000022590) #23 ENSPANG00000022614 #24 ADIRF (ENSPANG00000038826) ENSPANG00000044394 ENSPANG00000050921 ENSPANG00000040344 ENSPANG00000000253 ENSPANG00000047502 ZFAND4 (ENSPANG00000022669) MARCHF8 (ENSPANG00000022668) ALOX5 (ENSPANG00000022667) PARG (ENSPANG00000022653) TIMM23 (ENSPANG00000022652) NCOA4 (ENSPANG00000022656) MSMB (ENSPANG00000022672) Cercopithecinae_d ANCESTRAL SPECIES 165 ENSGT00950000183120.e.a.b.k ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00390000016470.d ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00910000148314 ENSGT00940000156225.c #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00910000147315 ENSGT00910000147005 ENSGT00390000017446 ENSGT00940000153195.B.l.i.b ENSGT00940000163475.a.b ENSGT00390000000854.c.b.k.b.b.c.a ##26 ENSGT00940000163475.a.a.b Sooty mangabey MODERN SPECIES 208 NRG3 (ENSCATG00000036609) #7 GHITM (ENSCATG00000015640) #8 GPR15LG (ENSCATG00000013387) #9 CDHR1 (ENSCATG00000029487) #10 LRIT2 (ENSCATG00000025337) #11 LRIT1 (ENSCATG00000030741) #12 RGR (ENSCATG00000039386) #13 ENSCATG00000039080 CCSER2 (ENSCATG00000042198) #14 GRID1 (ENSCATG00000034859) #17 WAPL (ENSCATG00000026825) #18 OPN4 (ENSCATG00000042650) #19 LDB3 (ENSCATG00000044117) #20 ENSCATG00000015471 BMPR1A (ENSCATG00000033442) #22 MMRN2 (ENSCATG00000041891) #23 SNCG (ENSCATG00000039691) #24 ENSCATG00000039551 ENSCATG00000038730 ADIRF (ENSCATG00000038594) ENSCATG00000038544 ENSCATG00000035131 ENSCATG00000034645 ##26 ENSCATG00000034616 ENSCATG00000037641 Drill MODERN SPECIES 1176 GRID1 (ENSMLEG00000031825) #17 WAPL (ENSMLEG00000042571) #18 OPN4 (ENSMLEG00000041506) #19 LDB3 (ENSMLEG00000039120) #20 BMPR1A (ENSMLEG00000034835) #22 MMRN2 (ENSMLEG00000034357) #23 ENSMLEG00000008174 #24 ENSMLEG00000033497 ADIRF (ENSMLEG00000037473) ENSMLEG00000037558 ENSMLEG00000011787 Rhinopithecus ANCESTRAL SPECIES 505 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225.c #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00910000147005 ENSGT00390000017446 ENSGT00940000153195.B.l.i.b Golden snub-nosed monkey MODERN SPECIES 2223 OPN4 (ENSRROG00000033573) #19 LDB3 (ENSRROG00000002084) #20 BMPR1A (ENSRROG00000035912) #22 MMRN2 (ENSRROG00000026064) #23 SNCG (ENSRROG00000022922) #24 ADIRF (ENSRROG00000031440) ENSRROG00000034413 Black snub-nosed monkey MODERN SPECIES 1123 ENSRBIG00000036362 WAPL (ENSRBIG00000035793) #18 OPN4 (ENSRBIG00000034068) #19 LDB3 (ENSRBIG00000039688) #20 BMPR1A (ENSRBIG00000031649) #22 MMRN2 (ENSRBIG00000040427) #23 SNCG (ENSRBIG00000042822) #24 ENSRBIG00000042300 ADIRF (ENSRBIG00000033995) Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b ENSGT00530000064220 ENSGT00940000154369.d ENSGT01030000234629.C ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT01090000260040.b.b.b.b.a.a.a.a ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x ENSGT00940000157909 ENSGT00510000046985.i ENSGT01000000214434.A ENSGT00940000156225.d #22 ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 ENSGT00390000010687.a.a ENSGT00940000161292 ENSGT00940000160094 ENSGT00520000055625.b ENSGT01030000234558.A.a.b ENSGT00940000161947 ENSGT00940000164931 ENSGT00940000164933 ENSGT00940000154435.p Rhinopithecus ANCESTRAL SPECIES 110 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b ENSGT00530000064220 ENSGT00940000154369.d ENSGT01030000234629.C ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.u.b.b ENSGT00940000160511 ENSGT01030000234579.A.b.x ENSGT00940000157909 ENSGT00510000046985.i ENSGT01000000214434.A ENSGT00940000156225.d #22 ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 ENSGT00390000010687.a.a ENSGT00940000161292 ENSGT00940000160094 ENSGT00520000055625.b ENSGT00390000015224.c.a.a.b.b Golden snub-nosed monkey MODERN SPECIES 2072 TRIM42 (ENSRROG00000033793) SLC25A36 (ENSRROG00000037476) ENSRROG00000028830 SPSB4 (ENSRROG00000043824) PXYLP1 (ENSRROG00000022663) ZBTB38 (ENSRROG00000009960) RASA2 (ENSRROG00000039486) ENSRROG00000038402 ENSRROG00000030523 GRK7 (ENSRROG00000038885) ATP1B3 (ENSRROG00000030567) TFDP2 (ENSRROG00000033835) ENSRROG00000034265 GK5 (ENSRROG00000029129) ENSRROG00000043111 #22 ENSRROG00000044183 Black snub-nosed monkey MODERN SPECIES 699 ENSRBIG00000033603 #22 XRN1 (ENSRBIG00000041227) ATR (ENSRBIG00000037499) PLS1 (ENSRBIG00000043960) TRPC1 (ENSRBIG00000023801) PCOLCE2 (ENSRBIG00000033789) U2SURP (ENSRBIG00000041099) CHST2 (ENSRBIG00000026420) SLC9A9 (ENSRBIG00000030019) DIPK2A (ENSRBIG00000011816) ENSRBIG00000031667 Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b ENSGT00530000064220 ENSGT00940000154369.d ENSGT01030000234629.C ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x ENSGT00940000157909 ENSGT00510000046985.i ENSGT01000000214434.A ENSGT00940000156225.d #22 ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 ENSGT00390000010687.a.a ENSGT00940000161292 ENSGT00940000160094 ENSGT00520000055625.b ENSGT01030000234558.A.a.b ENSGT00940000161947 ENSGT00940000164931 ENSGT00940000164933 ENSGT00940000154435.p Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00950000183086.a.a.b ENSGT00910000147512 ENSGT00910000147447 ENSGT00530000064220 ENSGT00940000154369.d ENSGT01030000234629.C ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x ENSGT00940000157909 ENSGT00510000046985.i ENSGT01000000214434.A ENSGT00940000156225.d #22 ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00940000162334 ENSGT00390000010687.a.a ENSGT00940000161292 ENSGT00940000160094 ENSGT00520000055625.b ENSGT01030000234558.A.a.b ENSGT00940000161947 ENSGT00940000164931 ENSGT00940000164933 ENSGT00940000154435.p Cercopithecinae_b ANCESTRAL SPECIES ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b ENSGT00910000147512 ENSGT00910000147447 ENSGT00530000064220 ENSGT00940000154369.d ENSGT01030000234629.C ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x ENSGT00940000157909 ENSGT01000000214434.A ENSGT00940000156225.d #22 ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000161292 ENSGT00940000160094 ENSGT00520000055625.b ENSGT01030000234558.A.a.b ENSGT00940000161947 ENSGT00940000164933 ENSGT00940000164931 ENSGT00940000154435.p ENSGT00940000161728 Cercopithecinae_d ANCESTRAL SPECIES 16 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b ENSGT00910000147512 ENSGT00910000147447 ENSGT00530000064220 ENSGT00940000154369.d ENSGT01030000234629.C ENSGT00390000016324 ENSGT00940000161449 ENSGT00940000158201 ENSGT00940000155481.u.b ENSGT00940000160511 ENSGT01030000234579.A.b.x ENSGT00940000157909 ENSGT01000000214434.A ENSGT00940000156225.d #22 ENSGT00670000098080 ENSGT00940000155714 ENSGT00950000183097.a.b ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000161292 ENSGT00940000160094 ENSGT00520000055625.b Sooty mangabey MODERN SPECIES 656 NMNAT3 (ENSCATG00000031087) CLSTN2 (ENSCATG00000036787) ENSCATG00000045166 ENSCATG00000005820 TRIM42 (ENSCATG00000029341) SLC25A36 (ENSCATG00000031849) SPSB4 (ENSCATG00000038455) PXYLP1 (ENSCATG00000036840) ZBTB38 (ENSCATG00000005041) RASA2 (ENSCATG00000033775) RNF7 (ENSCATG00000042225) GRK7 (ENSCATG00000018025) ATP1B3 (ENSCATG00000040498) TFDP2 (ENSCATG00000035711) GK5 (ENSCATG00000033849) ENSCATG00000031692 #22 XRN1 (ENSCATG00000041794) ATR (ENSCATG00000034316) PLS1 (ENSCATG00000034817) TRPC1 (ENSCATG00000034251) PCOLCE2 (ENSCATG00000025595) U2SURP (ENSCATG00000039024) CHST2 (ENSCATG00000022686) SLC9A9 (ENSCATG00000034835) DIPK2A (ENSCATG00000042655) ENSCATG00000034132 Platyrrhini ANCESTRAL SPECIES 49 ENSGT00940000153912.A #14 ENSGT00390000016470.d ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00910000147005 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00860000136069 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 Cebidae ANCESTRAL SPECIES 16 ENSGT00940000153912.A #14 ENSGT00390000016470.d ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00860000136069 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000160066 Marmoset MODERN SPECIES 3 ENSCJAG00000008101 #31 ENSCJAG00000072533 ENSCJAG00000081025 ENSCJAG00000083223 ENSCJAG00000079169 ENSCJAG00000008837 RGR (ENSCJAG00000015338) #13 LRIT1 (ENSCJAG00000015350) #12 LRIT2 (ENSCJAG00000056097) #11 CDHR1 (ENSCJAG00000084607) #10 ENSCJAG00000068554 #9 ENSCJAG00000085907 #8 ENSCJAG00000071422 ENSCJAG00000047316 LDB3 (ENSCJAG00000011521) #20 BMPR1A (ENSCJAG00000011555) #22 MMRN2 (ENSCJAG00000011588) #23 ENSCJAG00000084420 SNCG (ENSCJAG00000065128) #24 ADIRF (ENSCJAG00000073286) ENSCJAG00000011628 #25 ENSCJAG00000011633 ##26 SHLD2 (ENSCJAG00000011757) #27 ENSCJAG00000011770 #28 GPRIN2 (ENSCJAG00000045811) #29 ENSCJAG00000061688 ENSCJAG00000078491 ENSCJAG00000087361 ENSCJAG00000087144 ENSCJAG00000055667 ENSCJAG00000044249 Cebidae_a ANCESTRAL SPECIES 74 ENSGT00940000153912.A #14 ENSGT00390000016470.d ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00860000136069 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000160066 Capuchin MODERN SPECIES 610 ENSCCAG00000034705 OPN4 (ENSCCAG00000033069) #19 LDB3 (ENSCCAG00000024950) #20 BMPR1A (ENSCCAG00000034763) #22 MMRN2 (ENSCCAG00000021443) #23 SNCG (ENSCCAG00000029794) #24 ADIRF (ENSCCAG00000035994) ENSCCAG00000026182 #25 ENSCCAG00000026762 ##26 SHLD2 (ENSCCAG00000029396) #27 ENSCCAG00000036714 #28 ENSCCAG00000033336 #31 Bolivian squirrel monkey MODERN SPECIES 78 ENSSBOG00000032165 ENSSBOG00000020863 CCSER2 (ENSSBOG00000029108) #14 ENSSBOG00000034267 GRID1 (ENSSBOG00000034803) #17 WAPL (ENSSBOG00000030301) #18 ENSSBOG00000020266 ENSSBOG00000026101 OPN4 (ENSSBOG00000034969) #19 LDB3 (ENSSBOG00000032655) #20 BMPR1A (ENSSBOG00000021630) #22 MMRN2 (ENSSBOG00000025638) #23 SNCG (ENSSBOG00000027527) #24 ADIRF (ENSSBOG00000023226) ENSSBOG00000020302 #25 ENSSBOG00000033480 ##26 SHLD2 (ENSSBOG00000020023) #27 ENSSBOG00000034981 #28 GPRIN2 (ENSSBOG00000029209) #29 ENSSBOG00000019027 #31 ANTXRL (ENSSBOG00000031720) #32 ENSSBOG00000018742 RBP3 (ENSSBOG00000029731) #37 GDF2 (ENSSBOG00000032239) GDF10 (ENSSBOG00000033375) PTPN20 (ENSSBOG00000028737) Mas night monkey MODERN SPECIES 613 ENSANAG00000022446 #28 ENSANAG00000000061 #31 ENSANAG00000032544 #32 RBP3 (ENSANAG00000035672) #37 GDF2 (ENSANAG00000030460) GDF10 (ENSANAG00000022823) PTPN20 (ENSANAG00000024451) OPN4 (ENSANAG00000035648) #19 LDB3 (ENSANAG00000036659) #20 BMPR1A (ENSANAG00000022872) #22 MMRN2 (ENSANAG00000025316) #23 SNCG (ENSANAG00000031635) #24 ADIRF (ENSANAG00000027094) ENSANAG00000029330 ENSANAG00000032627 #25 ENSANAG00000029386 ##26 ENSANAG00000018193 SHLD2 (ENSANAG00000032313) #27 ENSANAG00000025083 ENSANAG00000009415 ENSANAG00000029573 TIMM23 (ENSANAG00000030672) PARG (ENSANAG00000033536) Tarsier MODERN SPECIES 4801 WAPL (ENSTSYG00000008827) #18 ENSTSYG00000037278 OPN4 (ENSTSYG00000004740) #19 LDB3 (ENSTSYG00000004785) #20 ENSTSYG00000009745 BMPR1A (ENSTSYG00000008054) #22 MMRN2 (ENSTSYG00000031357) #23 SNCG (ENSTSYG00000029468) #24 ADIRF (ENSTSYG00000028779) FAM25A (ENSTSYG00000035498) #25 ENSTSYG00000001578 #26 ENSTSYG00000036004 #27 ENSTSYG00000002169 #28 ENSTSYG00000008281 Strepsirrhini ANCESTRAL SPECIES 11 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 Lemuriformes ANCESTRAL SPECIES 7 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000160066 ENSGT00940000161964 Mouse lemur MODERN SPECIES 6 VCL (ENSMICG00000011725) AP3M1 (ENSMICG00000011748) ADK (ENSMICG00000011753) ENSMICG00000029394 KAT6B (ENSMICG00000000023) DUSP29 (ENSMICG00000017812) DUSP13 (ENSMICG00000017813) ENSMICG00000037321 ENSMICG00000044167 SNURF (ENSMICG00000033656) SNRPN (ENSMICG00000042356) GRID1 (ENSMICG00000013627) #17 WAPL (ENSMICG00000001724) #18 OPN4 (ENSMICG00000013918) #19 LDB3 (ENSMICG00000013929) #20 BMPR1A (ENSMICG00000003384) #22 MMRN2 (ENSMICG00000000360) #23 SNCG (ENSMICG00000045281) #24 ADIRF (ENSMICG00000041499) ENSMICG00000045585 #25 ENSMICG00000036686 #26 SHLD2 (ENSMICG00000029494) #27 ENSMICG00000013579 #28 ZNF32 (ENSMICG00000043257) CXCL12 (ENSMICG00000011935) TMEM72 (ENSMICG00000026795) RASSF4 (ENSMICG00000007181) ZNF22 (ENSMICG00000037541) ENSMICG00000033592 ALOX5 (ENSMICG00000008704) MARCHF8 (ENSMICG00000034366) Lemuriformes_a ANCESTRAL SPECIES 101 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000160066 ENSGT00940000161964 Greater bamboo lemur MODERN SPECIES 598 ENSPSMG00000008907 GRID1 (ENSPSMG00000008896) #17 ENSPSMG00000008892 WAPL (ENSPSMG00000008786) #18 OPN4 (ENSPSMG00000008631) #19 LDB3 (ENSPSMG00000008524) #20 BMPR1A (ENSPSMG00000008265) #22 MMRN2 (ENSPSMG00000008237) #23 SNCG (ENSPSMG00000008227) #24 ADIRF (ENSPSMG00000008181) ENSPSMG00000008172 #25 ENSPSMG00000008147 #26 ENSPSMG00000008112 #27 ENSPSMG00000008107 #27 ENSPSMG00000008104 #28 GPRIN2 (ENSPSMG00000008086) #29 ENSPSMG00000008082 #30 Coquerels sifaka MODERN SPECIES 494 WAPL (ENSPCOG00000016189) #18 OPN4 (ENSPCOG00000023449) #19 LDB3 (ENSPCOG00000020023) #20 BMPR1A (ENSPCOG00000017522) #22 MMRN2 (ENSPCOG00000008246) #23 SNCG (ENSPCOG00000020303) #24 ADIRF (ENSPCOG00000027059) ENSPCOG00000015367 #25 ENSPCOG00000021395 #26 ENSPCOG00000022430 #27 ENSPCOG00000020394 #28 RBP3 (ENSPCOG00000004977) #37 GDF2 (ENSPCOG00000027073) GDF10 (ENSPCOG00000016165) ENSPCOG00000013251 PTPN20 (ENSPCOG00000014055) FRMPD2 (ENSPCOG00000018018) MAPK8 (ENSPCOG00000026756) ARHGAP22 (ENSPCOG00000028260) Bushbaby MODERN SPECIES 390 ENSOGAG00000008180 #18 OPN4 (ENSOGAG00000017016) #19 LDB3 (ENSOGAG00000017018) #20 BMPR1A (ENSOGAG00000010762) #22 MMRN2 (ENSOGAG00000027665) #23 SNCG (ENSOGAG00000007574) #24 ADIRF (ENSOGAG00000009362) ENSOGAG00000003641 #26 ENSOGAG00000003806 #27 ENSOGAG00000003809 #28 GPRIN2 (ENSOGAG00000026717) #29 ENSOGAG00000032974 #30 ENSOGAG00000009829 #31 ENSOGAG00000029273 #32 Laurasiatheria ANCESTRAL SPECIES 14 ENSGT00940000159732 ENSGT00940000156754.a.a ##7 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b.l #26 ENSGT00910000147005 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727 #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 Laurasiatheria_a ANCESTRAL SPECIES 15 ENSGT00940000159732 ENSGT00940000156754.a.a ##7 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b.l #26 ENSGT00910000147005 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00940000157727.t.b #32 ENSGT00890000139463.a #36 Artiodactyla ANCESTRAL SPECIES 14 ENSGT00940000159732 ENSGT00940000156754.a.a ##7 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT00510000046986.y ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00940000157727.t.b #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 Suina ANCESTRAL SPECIES 6 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT00510000046986.y ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Chacoan peccary MODERN SPECIES 975 TSPAN14 (ENSCWAG00000016283) SH2D4B (ENSCWAG00000016213) ENSCWAG00000016174 NRG3 (ENSCWAG00000015993) #7 GHITM (ENSCWAG00000015973) #8 GPR15LG (ENSCWAG00000015937) #9 CDHR1 (ENSCWAG00000015860) #10 LRIT2 (ENSCWAG00000015831) #11 LRIT1 (ENSCWAG00000015793) #12 RGR (ENSCWAG00000015482) #13 CCSER2 (ENSCWAG00000015355) #14 GRID1 (ENSCWAG00000015223) #17 WAPL (ENSCWAG00000015125) #18 OPN4 (ENSCWAG00000014831) #19 LDB3 (ENSCWAG00000013915) #20 BMPR1A (ENSCWAG00000013837) #22 MMRN2 (ENSCWAG00000013566) #23 SNCG (ENSCWAG00000013503) #24 ADIRF (ENSCWAG00000013478) ENSCWAG00000013442 #25 ENSCWAG00000013386 ##26 SHLD2 (ENSCWAG00000013233) #27 ENSCWAG00000013160 #28 GPRIN2 (ENSCWAG00000013145) #29 ENSCWAG00000013125 #30 ENSCWAG00000012996 #31 Pig MODERN SPECIES 5 GHITM (ENSSSCG00000010345) #8 GPR15LG (ENSSSCG00000024634) #9 CDHR1 (ENSSSCG00000010348) #10 LRIT2 (ENSSSCG00000010347) #11 LRIT1 (ENSSSCG00000034402) #12 RGR (ENSSSCG00000010350) #13 CCSER2 (ENSSSCG00000010351) #14 ENSSSCG00000027329 ENSSSCG00000059672 GRID1 (ENSSSCG00000010352) #17 ENSSSCG00000044759 WAPL (ENSSSCG00000010357) #18 OPN4 (ENSSSCG00000010358) #19 ENSSSCG00000010359 #20 ENSSSCG00000060206 #20 BMPR1A (ENSSSCG00000010360) #22 ENSSSCG00000059512 MMRN2 (ENSSSCG00000024048) #23 SNCG (ENSSSCG00000026850) #24 ADIRF (ENSSSCG00000037918) ENSSSCG00000051357 ENSSSCG00000026339 #25 GLUD1 (ENSSSCG00000010368) ##26 SHLD2 (ENSSSCG00000027767) #27 ENSSSCG00000028341 #28 ENSSSCG00000010369 #30 ENSSSCG00000010370 #31 ENSSSCG00000043778 #32 ZNF488 (ENSSSCG00000040893) #36 RBP3 (ENSSSCG00000010374) #37 GDF2 (ENSSSCG00000010375) Artiodactyla_a ANCESTRAL SPECIES 14 ENSGT00940000159732 ENSGT00940000156754.a.a ##7 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT00510000046986.y ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00940000157727.t.b #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 Artiodactyla_b ANCESTRAL SPECIES 13 ENSGT00940000159732 ENSGT00940000156754.a.a ##7 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT00510000046986.y ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00940000157727.t.b #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 Cetacea ANCESTRAL SPECIES 15 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT00510000046986.y ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Odontoceti ANCESTRAL SPECIES 14 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT00510000046986.y ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000007479.y.a.o ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Odontoceti_a ANCESTRAL SPECIES 11 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT00510000046986.y ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000007479.y.a.o ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Odontoceti_b ANCESTRAL SPECIES 14 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT00510000046986.y ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000007479.y.a.o ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Monodontidae ANCESTRAL SPECIES 14 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT00510000046986.y ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000007479.y.a.o ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Beluga whale MODERN SPECIES 65 FAM213A (ENSDLEG00000008086) TSPAN14 (ENSDLEG00000008056) SH2D4B (ENSDLEG00000008032) ENSDLEG00000008022 #7 GHITM (ENSDLEG00000007990) #8 CDHR1 (ENSDLEG00000007970) #10 LRIT2 (ENSDLEG00000007947) #11 LRIT1 (ENSDLEG00000007931) #12 RGR (ENSDLEG00000012476) #13 CCSER2 (ENSDLEG00000012429) #14 GRID1 (ENSDLEG00000012126) #17 ENSDLEG00000012096 #17 WAPL (ENSDLEG00000012059) #18 OPN4 (ENSDLEG00000011923) #19 LDB3 (ENSDLEG00000011854) #20 BMPR1A (ENSDLEG00000011835) #22 MMRN2 (ENSDLEG00000011819) #23 SNCG (ENSDLEG00000011813) #24 ADIRF (ENSDLEG00000011801) ENSDLEG00000011797 #25 GLUD1 (ENSDLEG00000011771) ##26 ENSDLEG00000011756 #27 ENSDLEG00000011751 #27 ENSDLEG00000011730 #28 GPRIN2 (ENSDLEG00000011726) #29 ENSDLEG00000011723 #30 ENSDLEG00000011531 #31 ZNF488 (ENSDLEG00000011507) #36 RBP3 (ENSDLEG00000011470) #37 GDF2 (ENSDLEG00000011460) GDF10 (ENSDLEG00000011452) Narwhal MODERN SPECIES 311 PRXL2A (ENSMMNG00015013046) TSPAN14 (ENSMMNG00015013074) SH2D4B (ENSMMNG00015013109) NRG3 (ENSMMNG00015013141) #7 GHITM (ENSMMNG00015013177) #8 GPR15LG (ENSMMNG00015013188) #9 CDHR1 (ENSMMNG00015013199) #10 LRIT2 (ENSMMNG00015013216) #11 LRIT1 (ENSMMNG00015013227) #12 RGR (ENSMMNG00015013252) #13 CCSER2 (ENSMMNG00015013293) #14 GRID1 (ENSMMNG00015013323) #17 WAPL (ENSMMNG00015013353) #18 OPN4 (ENSMMNG00015013391) #19 LDB3 (ENSMMNG00015013460) #20 BMPR1A (ENSMMNG00015013629) #22 ENSMMNG00015013646 MMRN2 (ENSMMNG00015013661) #23 SNCG (ENSMMNG00015013686) #24 ADIRF (ENSMMNG00015013711) ENSMMNG00015013718 #25 ENSMMNG00015013733 ##26 ENSMMNG00015013745 SHLD2 (ENSMMNG00015013761) #27 ENSMMNG00015013786 #28 GPRIN2 (ENSMMNG00015013806) #29 ENSMMNG00015013813 #30 ENSMMNG00015013838 #31 ENSMMNG00015013875 #36 RBP3 (ENSMMNG00015013882) #37 GDF2 (ENSMMNG00015013891) Vaquita MODERN SPECIES 7 PRXL2A (ENSPSNG00000022616) TSPAN14 (ENSPSNG00000022619) SH2D4B (ENSPSNG00000022622) NRG3 (ENSPSNG00000022624) #7 GHITM (ENSPSNG00000022628) #8 GPR15LG (ENSPSNG00000022629) #9 CDHR1 (ENSPSNG00000022630) #10 LRIT2 (ENSPSNG00000022631) #11 LRIT1 (ENSPSNG00000022632) #12 RGR (ENSPSNG00000022633) #13 CCSER2 (ENSPSNG00000022634) #14 GRID1 (ENSPSNG00000022635) #17 WAPL (ENSPSNG00000022637) #18 OPN4 (ENSPSNG00000009696) #19 LDB3 (ENSPSNG00000010047) #20 BMPR1A (ENSPSNG00000010853) #22 ENSPSNG00000010893 ENSPSNG00000010942 MMRN2 (ENSPSNG00000011005) #23 SNCG (ENSPSNG00000011282) #24 ADIRF (ENSPSNG00000011421) ENSPSNG00000011459 #25 ENSPSNG00000011506 ##26 SHLD2 (ENSPSNG00000011586) #27 ENSPSNG00000011662 ENSPSNG00000011721 #28 ENSPSNG00000011938 #30 ENSPSNG00000011998 #31 ENSPSNG00000012357 #36 RBP3 (ENSPSNG00000012387) #37 GDF2 (ENSPSNG00000012442) Dolphin MODERN SPECIES 4282 BMPR1A (ENSTTRG00000008108) #22 MMRN2 (ENSTTRG00000008128) #23 SNCG (ENSTTRG00000008137) #24 ADIRF (ENSTTRG00000008141) ENSTTRG00000008143 #25 GLUD1 (ENSTTRG00000008145) ##26 ENSTTRG00000008152 #27 Sperm whale MODERN SPECIES 12 PRXL2A (ENSPCTG00005006403) SH2D4B (ENSPCTG00005006438) ENSPCTG00005006456 NRG3 (ENSPCTG00005006486) #7 GHITM (ENSPCTG00005006615) #8 GPR15LG (ENSPCTG00005006634) #9 CDHR1 (ENSPCTG00005006669) #10 LRIT2 (ENSPCTG00005006723) #11 LRIT1 (ENSPCTG00005006744) #12 RGR (ENSPCTG00005006808) #13 CCSER2 (ENSPCTG00005007133) #14 GRID1 (ENSPCTG00005007265) #17 ENSPCTG00005007337 WAPL (ENSPCTG00005007435) #18 ENSPCTG00005007553 #20 BMPR1A (ENSPCTG00005007585) #22 ENSPCTG00005007616 MMRN2 (ENSPCTG00005007633) #23 SNCG (ENSPCTG00005007663) #24 ADIRF (ENSPCTG00005007691) ENSPCTG00005007704 #25 GLUD1 (ENSPCTG00005007726) ##26 SHLD2 (ENSPCTG00005007810) #27 ENSPCTG00005007877 ENSPCTG00005007905 #28 GPRIN2 (ENSPCTG00005007937) #29 ENSPCTG00005007943 #30 ENSPCTG00005007960 #32 ENSPCTG00005008007 #36 RBP3 (ENSPCTG00005008022) #37 GDF2 (ENSPCTG00005008038) Blue whale MODERN SPECIES 7 SH2D4B (ENSBMSG00010022475) NRG3 (ENSBMSG00010022472) #7 ENSBMSG00010022469 ENSBMSG00010022468 #8 ENSBMSG00010022467 #9 CDHR1 (ENSBMSG00010022466) #10 LRIT2 (ENSBMSG00010022464) #11 LRIT1 (ENSBMSG00010022463) #12 RGR (ENSBMSG00010022461) #13 CCSER2 (ENSBMSG00010022458) #14 GRID1 (ENSBMSG00010022455) #17 WAPL (ENSBMSG00010022452) #18 OPN4 (ENSBMSG00010022449) #19 LDB3 (ENSBMSG00010022437) #20 ENSBMSG00010022435 BMPR1A (ENSBMSG00010022434) #22 MMRN2 (ENSBMSG00010022433) #23 ENSBMSG00010022431 #24 ADIRF (ENSBMSG00010022430) ENSBMSG00010022429 #25 ENSBMSG00010022427 ##26 SHLD2 (ENSBMSG00010022425) #27 ENSBMSG00010022424 #28 GPRIN2 (ENSBMSG00010022423) #29 ENSBMSG00010022422 #30 ENSBMSG00010022420 #31 ENSBMSG00010022419 #32 ZNF488 (ENSBMSG00010022418) #36 RBP3 (ENSBMSG00010022417) #37 GDF2 (ENSBMSG00010022416) GDF10 (ENSBMSG00010022415) Pecora ANCESTRAL SPECIES 12 ENSGT00940000159732 ENSGT00940000156754.a.a ##7 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A.e.a #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00940000157727.t.b #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Yarkand deer MODERN SPECIES 6 ENSCHYG00000016802 #14 ENSCHYG00000016870 ENSCHYG00000016906 #8 ENSCHYG00000017038 #9 ENSCHYG00000017070 #10 ENSCHYG00000017257 #11 ENSCHYG00000017310 #12 ENSCHYG00000017365 #13 ENSCHYG00000017551 #14 GRID1 (ENSCHYG00000017999) #17 ENSCHYG00000018093 ENSCHYG00000018106 WAPL (ENSCHYG00000018174) #18 OPN4 (ENSCHYG00000018551) #19 LDB3 (ENSCHYG00000018764) #20 BMPR1A (ENSCHYG00000019547) #22 MMRN2 (ENSCHYG00000019649) #23 SNCG (ENSCHYG00000019855) #24 ENSCHYG00000019927 ENSCHYG00000019972 #25 ENSCHYG00000020027 ##26 SHLD2 (ENSCHYG00000020150) #27 ENSCHYG00000020321 #28 GPRIN2 (ENSCHYG00000020386) #29 ENSCHYG00000020437 #30 ENSCHYG00000020487 #31 ENSCHYG00000021019 ENSCHYG00000021080 #36 RBP3 (ENSCHYG00000021102) #37 GDF2 (ENSCHYG00000021149) GDF10 (ENSCHYG00000021188) Percora_a ANCESTRAL SPECIES 14 ENSGT00940000159732 ENSGT00940000156754.a.a ##7 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A.e.a #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00940000157727.t.b #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Bovidae ANCESTRAL SPECIES 27 ENSGT00940000159732 ENSGT00940000156754.a.a ##7 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A.e.a #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00940000157727.t.b #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Bovinae ANCESTRAL SPECIES 30 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A.e.a #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00940000157727.t.b #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Bos ANCESTRAL SPECIES 27 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A.e.a #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00940000157727.t.b #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Bos_b ANCESTRAL SPECIES 32 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A.e.a #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.t.b #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000160066 Cow MODERN SPECIES 20 ENSBTAG00000051629 ENSBTAG00000052588 GHITM (ENSBTAG00000032829) #8 GPR15LG (ENSBTAG00000050197) #9 CDHR1 (ENSBTAG00000001231) #10 LRIT2 (ENSBTAG00000023987) #11 LRIT1 (ENSBTAG00000003442) #12 RGR (ENSBTAG00000015681) #13 CCSER2 (ENSBTAG00000017611) #14 ENSBTAG00000020609 GRID1 (ENSBTAG00000019623) #17 ENSBTAG00000052026 WAPL (ENSBTAG00000012213) #18 OPN4 (ENSBTAG00000032800) #19 LDB3 (ENSBTAG00000018707) #20 BMPR1A (ENSBTAG00000000231) #22 MMRN2 (ENSBTAG00000003510) #23 SNCG (ENSBTAG00000003515) #24 ADIRF (ENSBTAG00000032774) ENSBTAG00000017946 #25 GLUD1 (ENSBTAG00000007540) ##26 SHLD2 (ENSBTAG00000019194) #27 SYT15 (ENSBTAG00000018356) #28 GPRIN2 (ENSBTAG00000046597) #29 PPYR1 (ENSBTAG00000004760) #30 ENSBTAG00000051015 ANXA8L1 (ENSBTAG00000018499) #31 ENSBTAG00000052872 #32 RBP3 (ENSBTAG00000005003) #37 GDF2 (ENSBTAG00000005004) GDF10 (ENSBTAG00000001019) Hybrid Bos Indicus MODERN SPECIES 20 PRXL2A (ENSBIXG00005030789) TSPAN14 (ENSBIXG00005030815) SH2D4B (ENSBIXG00005030847) NRG3 (ENSBIXG00005030869) #7 GHITM (ENSBIXG00005030889) #8 CDHR1 (ENSBIXG00005030897) #10 LRIT2 (ENSBIXG00005030907) #11 LRIT1 (ENSBIXG00005030911) #12 RGR (ENSBIXG00005030924) #13 CCSER2 (ENSBIXG00005030954) #14 ENSBIXG00005030980 GRID1 (ENSBIXG00005030992) #17 WAPL (ENSBIXG00005031003) #18 OPN4 (ENSBIXG00005031011) #19 LDB3 (ENSBIXG00005031036) #20 BMPR1A (ENSBIXG00005031085) #22 ENSBIXG00005031091 MMRN2 (ENSBIXG00005031095) #23 ENSBIXG00005031104 ENSBIXG00005031106 ENSBIXG00005031107 ##26 ENSBIXG00005031111 SHLD2 (ENSBIXG00005031116) #27 ENSBIXG00005031122 #28 GPRIN2 (ENSBIXG00005031126) #29 ENSBIXG00005031127 ENSBIXG00005031141 #31 ENSBIXG00005031161 #32 ENSBIXG00005031168 #36 RBP3 (ENSBIXG00005031171) #37 GDF2 (ENSBIXG00005031173) Bos_a ANCESTRAL SPECIES 25 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A.e.a #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00940000157727.t.b #32 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 Wild yak MODERN SPECIES 2555 ENSBMUG00000026760 WAPL (ENSBMUG00000026761) #18 OPN4 (ENSBMUG00000026765) #19 LDB3 (ENSBMUG00000026766) #20 BMPR1A (ENSBMUG00000026767) #22 MMRN2 (ENSBMUG00000026768) #23 ENSBMUG00000026769 SNCG (ENSBMUG00000026770) #24 ADIRF (ENSBMUG00000026771) ENSBMUG00000026772 #25 ENSBMUG00000026773 ##26 SHLD2 (ENSBMUG00000026774) #27 ENSBMUG00000026775 #28 GPRIN2 (ENSBMUG00000026776) #29 ENSBMUG00000026777 #30 ENSBMUG00000026778 #31 Domestic yak MODERN SPECIES 19 ENSBGRG00000026297 ENSBGRG00000026300 GHITM (ENSBGRG00000026306) #8 ENSBGRG00000026318 #9 CDHR1 (ENSBGRG00000026334) #10 LRIT2 (ENSBGRG00000026359) #11 LRIT1 (ENSBGRG00000026365) #12 RGR (ENSBGRG00000026377) #13 CCSER2 (ENSBGRG00000026406) #14 ENSBGRG00000026437 GRID1 (ENSBGRG00000026440) #17 WAPL (ENSBGRG00000026454) #18 OPN4 (ENSBGRG00000026480) #19 LDB3 (ENSBGRG00000026515) #20 ENSBGRG00000026555 BMPR1A (ENSBGRG00000026562) #22 MMRN2 (ENSBGRG00000026568) #23 ENSBGRG00000026574 #24 ENSBGRG00000026583 ENSBGRG00000026587 #25 ENSBGRG00000026591 ##26 SHLD2 (ENSBGRG00000026610) #27 ENSBGRG00000026621 #28 GPRIN2 (ENSBGRG00000007040) #29 ENSBGRG00000007056 #30 ENSBGRG00000007107 #31 ENSBGRG00000008116 #32 ENSBGRG00000008235 #32 RBP3 (ENSBGRG00000008305) #37 GDF2 (ENSBGRG00000008393) ENSBGRG00000008415 American bison MODERN SPECIES 3255 ENSBBBG00000010486 #7 ENSBBBG00000010477 ENSBBBG00000010469 #8 GPR15LG (ENSBBBG00000010463) #9 CDHR1 (ENSBBBG00000010458) #10 LRIT2 (ENSBBBG00000001821) #11 LRIT1 (ENSBBBG00000010448) #12 RGR (ENSBBBG00000010446) #13 CCSER2 (ENSBBBG00000008138) #14 GRID1 (ENSBBBG00000010400) #17 WAPL (ENSBBBG00000010375) #18 OPN4 (ENSBBBG00000010329) #19 LDB3 (ENSBBBG00000010306) #20 BMPR1A (ENSBBBG00000000071) #22 MMRN2 (ENSBBBG00000000083) #23 SNCG (ENSBBBG00000000096) #24 ADIRF (ENSBBBG00000000102) ENSBBBG00000000110 #25 ENSBBBG00000000117 ##26 SHLD2 (ENSBBBG00000000130) #27 ENSBBBG00000001741 #28 GPRIN2 (ENSBBBG00000001738) #29 ENSBBBG00000010248 #30 ENSBBBG00000010235 #31 ENSBBBG00000010146 #32 ENSBBBG00000010138 #36 RBP3 (ENSBBBG00000010135) #37 GDF2 (ENSBBBG00000010131) GDF10 (ENSBBBG00000010125) Caprinae ANCESTRAL SPECIES 26 ENSGT00940000159732 ENSGT00940000156754.a.a ##7 ENSGT00940000156754.a.b #7 ENSGT00940000157251.kb.b ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A.e.a #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00390000015789.d.b.b ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 Goat MODERN SPECIES 20 ENSCHIG00000000316 ENSCHIG00000000283 ##7 ENSCHIG00000000249 #7 ENSCHIG00000000175 GHITM (ENSCHIG00000000141) #8 CDHR1 (ENSCHIG00000000107) #10 LRIT2 (ENSCHIG00000000072) #11 LRIT1 (ENSCHIG00000009908) #12 RGR (ENSCHIG00000024790) #13 CCSER2 (ENSCHIG00000021791) #14 ENSCHIG00000018829 ENSCHIG00000016118 #17 WAPL (ENSCHIG00000013731) #18 OPN4 (ENSCHIG00000009531) #19 LDB3 (ENSCHIG00000009814) #20 BMPR1A (ENSCHIG00000000448) #22 MMRN2 (ENSCHIG00000000413) #23 SNCG (ENSCHIG00000000377) #24 ADIRF (ENSCHIG00000000346) ENSCHIG00000000311 #25 ENSCHIG00000000278 ##26 SHLD2 (ENSCHIG00000000239) #27 ENSCHIG00000000200 #28 GPRIN2 (ENSCHIG00000018615) #29 ENSCHIG00000018601 #30 ENSCHIG00000000097 #31 ENSCHIG00000000059 RBP3 (ENSCHIG00000011706) #37 GDF2 (ENSCHIG00000018131) GDF10 (ENSCHIG00000010153) ENSCHIG00000023856 Rambouillet Sheep MODERN SPECIES 17 ENSOARG00020026269 ENSOARG00020026276 NRG3 (ENSOARG00020026281) #7 ENSOARG00020026284 GHITM (ENSOARG00020026292) #8 GPR15LG (ENSOARG00020026294) #9 CDHR1 (ENSOARG00020026297) #10 LRIT2 (ENSOARG00020026301) #11 LRIT1 (ENSOARG00020026303) #12 RGR (ENSOARG00020026308) #13 CCSER2 (ENSOARG00020026314) #14 GRID1 (ENSOARG00020026327) #17 WAPL (ENSOARG00020026341) #18 OPN4 (ENSOARG00020026353) #19 LDB3 (ENSOARG00020026361) #20 BMPR1A (ENSOARG00020026367) #22 MMRN2 (ENSOARG00020026370) #23 SNCG (ENSOARG00020026371) #24 ADIRF (ENSOARG00020026372) ENSOARG00020026375 #25 GLUD1 (ENSOARG00020026378) ##26 ENSOARG00020026382 #28 GPRIN2 (ENSOARG00020026386) #29 ENSOARG00020026387 #30 ENSOARG00020026390 #31 ENSOARG00020026395 ZNF488 (ENSOARG00020026399) #36 RBP3 (ENSOARG00020026401) #37 GDF2 (ENSOARG00020026404) GDF10 (ENSOARG00020026407) PTPN20 (ENSOARG00020026411) Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 1166 ENSMMSG00000021280 ENSMMSG00000021262 ENSMMSG00000021237 #8 GPR15LG (ENSMMSG00000021220) #9 CDHR1 (ENSMMSG00000021201) #10 LRIT2 (ENSMMSG00000021169) #11 LRIT1 (ENSMMSG00000021146) #12 RGR (ENSMMSG00000020985) #13 CCSER2 (ENSMMSG00000020914) #14 ENSMMSG00000020896 ENSMMSG00000020879 GRID1 (ENSMMSG00000020834) #17 ENSMMSG00000020715 #18 OPN4 (ENSMMSG00000020622) #19 LDB3 (ENSMMSG00000020451) #20 ENSMMSG00000020370 #22 MMRN2 (ENSMMSG00000020346) #23 SNCG (ENSMMSG00000020320) #24 ADIRF (ENSMMSG00000020297) ENSMMSG00000020257 #25 ENSMMSG00000020208 ##26 SHLD2 (ENSMMSG00000020139) #27 ENSMMSG00000020096 #28 GPRIN2 (ENSMMSG00000020086) #29 ENSMMSG00000020079 #30 ENSMMSG00000019872 #31 ENSMMSG00000019843 ENSMMSG00000019835 #36 RBP3 (ENSMMSG00000019815) #37 GDF2 (ENSMMSG00000019804) GDF10 (ENSMMSG00000019785) Siberian musk deer MODERN SPECIES 1134 ENSMMSG00000013576 ENSMMSG00000013560 #22 ENSMMSG00000013544 ENSMMSG00000013527 ENSMMSG00000013511 TMEM100 (ENSMMSG00000013494) SMIM36 (ENSMMSG00000013486) MMD (ENSMMSG00000013464) HLF (ENSMMSG00000013443) STXBP4 (ENSMMSG00000013388) COX11 (ENSMMSG00000012972) TOM1L1 (ENSMMSG00000012939) Camelidae ANCESTRAL SPECIES 4 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000160066.b Alpaca MODERN SPECIES 143 LDB3 (ENSVPAG00000000477) #20 BMPR1A (ENSVPAG00000000478) #22 Arabian camel MODERN SPECIES 2 ENSCDRG00005007739 #7 ENSCDRG00005007794 ENSCDRG00005007837 GHITM (ENSCDRG00005007844) #8 GPR15LG (ENSCDRG00005007900) #9 CDHR1 (ENSCDRG00005008037) #10 LRIT2 (ENSCDRG00005010151) #11 LRIT1 (ENSCDRG00005010255) #12 RGR (ENSCDRG00005010360) #13 CCSER2 (ENSCDRG00005011191) #14 GRID1 (ENSCDRG00005011683) #17 WAPL (ENSCDRG00005011847) #18 ENSCDRG00005012026 #19 ENSCDRG00005012454 #20 ENSCDRG00005012659 #20 BMPR1A (ENSCDRG00005012764) #22 MMRN2 (ENSCDRG00005012817) #23 SNCG (ENSCDRG00005012944) #24 ADIRF (ENSCDRG00005013016) ENSCDRG00005013050 #25 ENSCDRG00005013088 ##26 SHLD2 (ENSCDRG00005013226) #27 ENSCDRG00005013292 #28 GPRIN2 (ENSCDRG00005013370) #29 ENSCDRG00005013393 #30 ENSCDRG00005013438 #31 ENSCDRG00005013958 #19 ZNF488 (ENSCDRG00005014182) #36 RBP3 (ENSCDRG00005014199) #37 GDF2 (ENSCDRG00005014217) GDF10 (ENSCDRG00005014232) Laurasiatheria_b ANCESTRAL SPECIES 15 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b.l #26 ENSGT00910000147005 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00940000157727.t.b #32 ENSGT00890000139463.a #36 Carnivora ANCESTRAL SPECIES 16 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00940000157727.t.b #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Caniformia ANCESTRAL SPECIES 13 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Canidae ANCESTRAL SPECIES 7 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT00390000007046.b.a.a.hb.b ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00950000186100 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Canis_lupus ANCESTRAL SPECIES 12 ENSGT00940000156754.a.b #7 ENSGT00390000015224.c.b.b.a.b.b.a ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT00390000007046.b.a.a.hb.b ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00950000186100 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 Dog MODERN SPECIES 32 ENSCAFG00845016035 ENSCAFG00845005888 GHITM (ENSCAFG00845005910) #8 GPR15LG (ENSCAFG00845005930) #9 CDHR1 (ENSCAFG00845005965) #10 LRIT2 (ENSCAFG00845006028) #11 LRIT1 (ENSCAFG00845006057) #12 ENSCAFG00845006075 RGR (ENSCAFG00845006108) #13 CCSER2 (ENSCAFG00845006187) #14 ENSCAFG00845006251 GRID1 (ENSCAFG00845006283) #17 WAPL (ENSCAFG00845006393) #18 OPN4 (ENSCAFG00845006582) #19 LDB3 (ENSCAFG00845006724) #20 BMPR1A (ENSCAFG00845006910) #22 MMRN2 (ENSCAFG00845006994) #23 SNCG (ENSCAFG00845007049) #24 ADIRF (ENSCAFG00845007081) ENSCAFG00845007112 #25 ENSCAFG00845007152 #26 ENSCAFG00845007274 #27 ENSCAFG00845007404 #28 NPY4R (ENSCAFG00845007503) #30 ENSCAFG00845007693 #31 ENSCAFG00845008165 #32 ZNF488 (ENSCAFG00845008319) #36 RBP3 (ENSCAFG00845008361) #37 GDF2 (ENSCAFG00845008392) GDF10 (ENSCAFG00845008410) DCP2 (ENSCAFG00845008467) Dingo MODERN SPECIES 324 GHITM (ENSCAFG00020013851) #8 GPR15LG (ENSCAFG00020013845) #9 CDHR1 (ENSCAFG00020013821) #10 LRIT2 (ENSCAFG00020013819) #11 LRIT1 (ENSCAFG00020013817) #12 ENSCAFG00020013806 RGR (ENSCAFG00020013803) #13 ENSCAFG00020013798 CCSER2 (ENSCAFG00020013790) #14 ENSCAFG00020013783 GRID1 (ENSCAFG00020013753) #17 ENSCAFG00020013732 WAPL (ENSCAFG00020012727) #18 OPN4 (ENSCAFG00020012667) #19 LDB3 (ENSCAFG00020012632) #20 BMPR1A (ENSCAFG00020012390) #22 MMRN2 (ENSCAFG00020012378) #23 SNCG (ENSCAFG00020012370) #24 ENSCAFG00020012369 ENSCAFG00020012367 #25 ENSCAFG00020012341 ##26 SHLD2 (ENSCAFG00020012332) #27 ENSCAFG00020012325 #28 GPRIN2 (ENSCAFG00020012318) #29 ENSCAFG00020012316 #30 ENSCAFG00020012309 #31 ZNF488 (ENSCAFG00020012306) #36 RBP3 (ENSCAFG00020012299) #37 GDF2 (ENSCAFG00020012297) GDF10 (ENSCAFG00020012295) ENSCAFG00020012287 Red fox MODERN SPECIES 2 ENSVVUG00000025602 #7 GHITM (ENSVVUG00000025608) #8 ENSVVUG00000025609 #9 CDHR1 (ENSVVUG00000025648) #10 LRIT2 (ENSVVUG00000025806) #11 LRIT1 (ENSVVUG00000025807) #12 ENSVVUG00000025808 RGR (ENSVVUG00000025809) #13 CCSER2 (ENSVVUG00000025813) #14 GRID1 (ENSVVUG00000025834) #17 ENSVVUG00000025879 ENSVVUG00000025886 WAPL (ENSVVUG00000025891) #18 OPN4 (ENSVVUG00000025900) #19 LDB3 (ENSVVUG00000025903) #20 BMPR1A (ENSVVUG00000025904) #22 ENSVVUG00000025909 #23 ENSVVUG00000025910 ENSVVUG00000025911 #24 ENSVVUG00000025912 #24 ADIRF (ENSVVUG00000025913) FAM25A (ENSVVUG00000025914) ENSVVUG00000025916 #26 SHLD2 (ENSVVUG00000025919) #27 ENSVVUG00000025932 #28 GPRIN2 (ENSVVUG00000025936) #29 ENSVVUG00000025939 #30 ENSVVUG00000025942 #31 ENSVVUG00000025949 #32 ZNF488 (ENSVVUG00000025960) #36 RBP3 (ENSVVUG00000025962) #37 Caniformia_b ANCESTRAL SPECIES 10 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Ursidae ANCESTRAL SPECIES 5 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b.d #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b.d #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.t.b #32 ENSGT00890000139463.a #36 ENSGT00390000014726.b #37 ENSGT00940000159802 Ursus ANCESTRAL SPECIES 6 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b.d #8 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b.d #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.l #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00890000139463.a #36 ENSGT00390000014726.b #37 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000160066 Polar bear MODERN SPECIES 197 PRXL2A (ENSUMAG00000014166) TSPAN14 (ENSUMAG00000014172) SH2D4B (ENSUMAG00000014184) ENSUMAG00000014191 #7 GHITM (ENSUMAG00000014200) #8 CDHR1 (ENSUMAG00000014204) #10 LRIT2 (ENSUMAG00000014223) #11 RGR (ENSUMAG00000014226) #13 CCSER2 (ENSUMAG00000014258) #14 ENSUMAG00000014262 GRID1 (ENSUMAG00000014265) #17 ENSUMAG00000014279 WAPL (ENSUMAG00000014284) #18 OPN4 (ENSUMAG00000014289) #19 LDB3 (ENSUMAG00000014291) #20 BMPR1A (ENSUMAG00000014295) #22 MMRN2 (ENSUMAG00000014302) #23 SNCG (ENSUMAG00000014308) #24 ENSUMAG00000014309 ENSUMAG00000014311 #25 ENSUMAG00000014372 #26 SHLD2 (ENSUMAG00000015420) #27 ENSUMAG00000015426 #28 GPRIN2 (ENSUMAG00000015431) #29 ENSUMAG00000015436 #30 ENSUMAG00000015441 #31 ZNF488 (ENSUMAG00000015457) #36 RBP3 (ENSUMAG00000015465) #37 GDF2 (ENSUMAG00000015485) GDF10 (ENSUMAG00000015492) ENSUMAG00000015535 American black bear MODERN SPECIES 3570 OPN4 (ENSUAMG00000027390) #19 LDB3 (ENSUAMG00000027395) #20 BMPR1A (ENSUAMG00000027417) #22 Giant Panda MODERN SPECIES 16 NRG3 (ENSAMEG00000002812) #7 GHITM (ENSAMEG00000009753) #8 ENSAMEG00000029479 GPR15LG (ENSAMEG00000029953) #9 CDHR1 (ENSAMEG00000009794) #10 LRIT2 (ENSAMEG00000009834) #11 LRIT1 (ENSAMEG00000009838) #12 RGR (ENSAMEG00000009851) #13 CCSER2 (ENSAMEG00000009866) #14 GRID1 (ENSAMEG00000009876) #17 WAPL (ENSAMEG00000009905) #18 ENSAMEG00000024384 ENSAMEG00000027199 OPN4 (ENSAMEG00000009912) #19 LDB3 (ENSAMEG00000009941) #20 BMPR1A (ENSAMEG00000009972) #22 MMRN2 (ENSAMEG00000009997) #23 ENSAMEG00000010004 #24 ADIRF (ENSAMEG00000010016) ENSAMEG00000010018 #25 ENSAMEG00000010021 ##26 ENSAMEG00000010047 #27 ENSAMEG00000010054 #28 GPRIN2 (ENSAMEG00000020069) #29 ENSAMEG00000020071 #30 ENSAMEG00000010062 #31 ENSAMEG00000027228 #32 ENSAMEG00000019898 #36 RBP3 (ENSAMEG00000017640) #37 GDF2 (ENSAMEG00000023495) GDF10 (ENSAMEG00000017645) Mustelinae ANCESTRAL SPECIES 31 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.b.b ##26 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00890000139463.a #36 ENSGT00940000157727.t.b #32 ENSGT00390000014726 #37 American mink MODERN SPECIES 332 WAPL (ENSNVIG00000024598) #18 ENSNVIG00000024595 OPN4 (ENSNVIG00000024593) #19 LDB3 (ENSNVIG00000024586) #20 BMPR1A (ENSNVIG00000024576) #22 MMRN2 (ENSNVIG00000024564) #23 SYUG (ENSNVIG00000024554) #24 ADIRF (ENSNVIG00000024553) ENSNVIG00000024551 #25 ENSNVIG00000024549 ##26 SHLD2 (ENSNVIG00000024540) #27 ENSNVIG00000024532 #28 GPRIN2 (ENSNVIG00000024530) #29 ENSNVIG00000024528 #30 ENSNVIG00000024506 #31 ENSNVIG00000024480 #32 ENSNVIG00000024476 #36 RBP3 (ENSNVIG00000024472) #37 GDF2 (ENSNVIG00000024470) GDF10 (ENSNVIG00000024468) Ferret MODERN SPECIES 278 ENSMPUG00000008487 #7 GHITM (ENSMPUG00000008508) #8 GPR15LG (ENSMPUG00000008519) #9 CDHR1 (ENSMPUG00000008527) #10 LRIT2 (ENSMPUG00000008541) #11 LRIT1 (ENSMPUG00000008558) #12 RGR (ENSMPUG00000008582) #13 CCSER2 (ENSMPUG00000008592) #14 GRID1 (ENSMPUG00000008603) #17 ENSMPUG00000008678 #17 WAPL (ENSMPUG00000008681) #18 ENSMPUG00000008696 OPN4 (ENSMPUG00000008699) #19 LDB3 (ENSMPUG00000008750) #20 BMPR1A (ENSMPUG00000008847) #22 MMRN2 (ENSMPUG00000008857) #23 SNCG (ENSMPUG00000008877) #24 ENSMPUG00000008934 ##26 SHLD2 (ENSMPUG00000008946) #27 ENSMPUG00000008956 #28 GPRIN2 (ENSMPUG00000019516) #29 ENSMPUG00000019517 #30 ENSMPUG00000008963 #31 ENSMPUG00000008973 #32 ENSMPUG00000008983 ENSMPUG00000008988 #32 RBP3 (ENSMPUG00000008997) #37 GDF2 (ENSMPUG00000009012) GDF10 (ENSMPUG00000009015) PTPN20 (ENSMPUG00000009020) Felidae ANCESTRAL SPECIES 14 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT00940000153299.c.a.b ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.u #32 ENSGT00940000157727.t.b #32 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 Panthera ANCESTRAL SPECIES 8 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT00940000153299.c.a.b ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000160066 Panthera_a ANCESTRAL SPECIES 9 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT00940000153299.c.a.b ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000160066 lion MODERN SPECIES 11 NRG3 (ENSPLOG00000008323) #7 ENSPLOG00000008300 ENSPLOG00000008255 ENSPLOG00000008234 GHITM (ENSPLOG00000008205) #8 GPR15LG (ENSPLOG00000008181) #9 CDHR1 (ENSPLOG00000008089) #10 LRIT2 (ENSPLOG00000008047) #11 LRIT1 (ENSPLOG00000008018) #12 RGR (ENSPLOG00000007861) #13 CCSER2 (ENSPLOG00000007805) #14 GRID1 (ENSPLOG00000007714) #17 WAPL (ENSPLOG00000022015) #18 OPN4 (ENSPLOG00000021883) #19 LDB3 (ENSPLOG00000021595) #20 BMPR1A (ENSPLOG00000021503) #22 MMRN2 (ENSPLOG00000021472) #23 SNCG (ENSPLOG00000021447) #24 ADIRF (ENSPLOG00000021438) ENSPLOG00000021426 #25 ENSPLOG00000021396 ##26 SHLD2 (ENSPLOG00000021357) #27 ENSPLOG00000021321 #28 GPRIN2 (ENSPLOG00000021309) #29 ENSPLOG00000021298 #30 ENSPLOG00000021198 #31 ENSPLOG00000021062 MAPK8 (ENSPLOG00000020978) ARHGAP22 (ENSPLOG00000020857) LRRC18 (ENSPLOG00000020817) WDFY4 (ENSPLOG00000020595) leopard MODERN SPECIES 11 ENSPPRG00000019021 ENSPPRG00000018110 ENSPPRG00000022253 GHITM (ENSPPRG00000015349) #8 GPR15LG (ENSPPRG00000015158) #9 CDHR1 (ENSPPRG00000014914) #10 LRIT2 (ENSPPRG00000014434) #11 LRIT1 (ENSPPRG00000013656) #12 RGR (ENSPPRG00000013319) #13 CCSER2 (ENSPPRG00000012953) #14 GRID1 (ENSPPRG00000011939) #17 WAPL (ENSPPRG00000010735) #18 ENSPPRG00000010015 OPN4 (ENSPPRG00000009960) #19 LDB3 (ENSPPRG00000009226) #20 BMPR1A (ENSPPRG00000007800) #22 MMRN2 (ENSPPRG00000007550) #23 SNCG (ENSPPRG00000007274) #24 ADIRF (ENSPPRG00000007082) ENSPPRG00000006999 #25 ENSPPRG00000006849 ##26 SHLD2 (ENSPPRG00000006441) #27 ENSPPRG00000006053 #28 GPRIN2 (ENSPPRG00000021954) #29 ENSPPRG00000021933 #30 ENSPPRG00000005065 #31 RBP3 (ENSPPRG00000003492) #37 GDF2 (ENSPPRG00000003460) GDF10 (ENSPPRG00000003070) ENSPPRG00000002770 FRMPD2 (ENSPPRG00000002679) Tiger MODERN SPECIES 408 ENSPTIG00000016550 #7 ENSPTIG00000016796 GHITM (ENSPTIG00000017022) #8 GPR15LG (ENSPTIG00000017286) #9 CDHR1 (ENSPTIG00000017365) #10 LRIT2 (ENSPTIG00000017878) #11 LRIT1 (ENSPTIG00000018181) #12 RGR (ENSPTIG00000018307) #13 CCSER2 (ENSPTIG00000018603) #14 GRID1 (ENSPTIG00000019242) #17 WAPL (ENSPTIG00000019636) #18 OPN4 (ENSPTIG00000007105) #19 LDB3 (ENSPTIG00000007693) #20 BMPR1A (ENSPTIG00000010900) #22 MMRN2 (ENSPTIG00000011278) #23 SNCG (ENSPTIG00000011520) #24 ADIRF (ENSPTIG00000011608) ENSPTIG00000012743 #25 ENSPTIG00000013163 #26 SHLD2 (ENSPTIG00000013453) #27 ENSPTIG00000014045 #28 GPRIN2 (ENSPTIG00000002365) #29 ENSPTIG00000002387 #30 ENSPTIG00000015547 #31 RBP3 (ENSPTIG00000017677) #37 GDF2 (ENSPTIG00000017943) GDF10 (ENSPTIG00000018028) Cat MODERN SPECIES 242 TSPAN14 (ENSFCAG00000037107) SH2D4B (ENSFCAG00000000713) NRG3 (ENSFCAG00000014132) #7 ENSFCAG00000038749 GHITM (ENSFCAG00000001647) #8 GPR15LG (ENSFCAG00000041116) #9 CDHR1 (ENSFCAG00000001649) #10 LRIT2 (ENSFCAG00000001653) #11 LRIT1 (ENSFCAG00000032117) #12 RGR (ENSFCAG00000001655) #13 CCSER2 (ENSFCAG00000010441) #14 GRID1 (ENSFCAG00000011060) #17 WAPL (ENSFCAG00000015013) #18 OPN4 (ENSFCAG00000015018) #19 LDB3 (ENSFCAG00000015019) #20 BMPR1A (ENSFCAG00000027895) #22 MMRN2 (ENSFCAG00000007960) #23 SNCG (ENSFCAG00000007962) #24 ADIRF (ENSFCAG00000007964) ENSFCAG00000049295 #25 ENSFCAG00000007969 ##26 SHLD2 (ENSFCAG00000024707) #27 ENSFCAG00000000311 #28 GPRIN2 (ENSFCAG00000000312) #29 ENSFCAG00000011756 #30 ENSFCAG00000011757 #31 ENSFCAG00000050359 #32 ENSFCAG00000050611 #32 ZNF488 (ENSFCAG00000040653) #36 RBP3 (ENSFCAG00000014855) #37 GDF10 (ENSFCAG00000008962) Laurasiatheria_c ANCESTRAL SPECIES 15 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b.l #26 ENSGT00910000147005 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.t.a #32 ENSGT00940000157727.t.b #32 ENSGT00890000139463.a #36 Equus ANCESTRAL SPECIES 60 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT01090000263464 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00910000147005 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 ENSGT00940000157727.t.a #32 ENSGT00940000157727.t.b.a #32 ENSGT00940000157727.t.b.b #32 ENSGT00890000139463.a #36 Donkey MODERN SPECIES 11 NRG3 (ENSEASG00005028600) #7 ENSEASG00005019881 ENSEASG00005024420 GHITM (ENSEASG00005019880) #8 GPR15LG (ENSEASG00005029369) #9 CDHR1 (ENSEASG00005019661) #10 LRIT2 (ENSEASG00005019612) #11 LRIT1 (ENSEASG00005019608) #12 RGR (ENSEASG00005019607) #13 CCSER2 (ENSEASG00005019603) #14 ENSEASG00005031816 GRID1 (ENSEASG00005019598) #17 WAPL (ENSEASG00005019579) #18 OPN4 (ENSEASG00005019568) #19 LDB3 (ENSEASG00005019565) #20 BMPR1A (ENSEASG00005019517) #22 MMRN2 (ENSEASG00005029841) #23 SNCG (ENSEASG00005019495) #24 ENSEASG00005019493 ENSEASG00005024103 ADIRF (ENSEASG00005027138) ENSEASG00005027835 #25 ENSEASG00005019482 ##26 ENSEASG00005019480 #27 ENSEASG00005019478 #28 GPRIN2 (ENSEASG00005026034) #29 ENSEASG00005026748 #30 ENSEASG00005019473 #31 ENSEASG00005027287 #32 ENSEASG00005025795 #32 ENSEASG00005030992 #32 Horse MODERN SPECIES SH2D4B (ENSECAG00000004160) ENSECAG00000059942 ENSECAG00000054628 NRG3 (ENSECAG00000020751) #7 GHITM (ENSECAG00000019064) #8 CDHR1 (ENSECAG00000009475) #10 LRIT2 (ENSECAG00000009070) #11 LRIT1 (ENSECAG00000003092) #12 RGR (ENSECAG00000019050) #13 CCSER2 (ENSECAG00000014169) #14 ENSECAG00000046168 GRID1 (ENSECAG00000021446) #17 WAPL (ENSECAG00000016925) #18 OPN4 (ENSECAG00000010886) #19 LDB3 (ENSECAG00000024538) #20 BMPR1A (ENSECAG00000020461) #22 MMRN2 (ENSECAG00000017808) #23 SNCG (ENSECAG00000013252) ENSECAG00000007371 ##26 SHLD2 (ENSECAG00000001626) #27 ENSECAG00000022004 #28 GPRIN2 (ENSECAG00000004381) #29 ENSECAG00000035414 #30 ENSECAG00000020129 #31 ENSECAG00000044706 ENSECAG00000017380 #32 ENSECAG00000028672 #32 ENSECAG00000037135 #32 ZNF488 (ENSECAG00000059477) #36 RBP3 (ENSECAG00000013868) #37 GDF2 (ENSECAG00000012596) Chiroptera ANCESTRAL SPECIES 6 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000160066 ENSGT00940000161964 Megabat MODERN SPECIES 3919 BMPR1A (ENSPVAG00000016667) #22 MMRN2 (ENSPVAG00000016672) #23 SNCG (ENSPVAG00000016676) #24 ADIRF (ENSPVAG00000016678) ENSPVAG00000016680 #25 Microchiroptera ANCESTRAL SPECIES 5 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00390000015172 #9 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b.l #26 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b.k.a ##26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00890000139463.a #36 ENSGT00390000014726 #37 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000160066 Greater horseshoe bat MODERN SPECIES 7 NRG3 (ENSRFEG00010019871) #7 ENSRFEG00010020047 GHITM (ENSRFEG00010020061) #8 GPR15LG (ENSRFEG00010020100) #9 CDHR1 (ENSRFEG00010020126) #10 LRIT2 (ENSRFEG00010020160) #11 LRIT1 (ENSRFEG00010020185) #12 RGR (ENSRFEG00010020222) #13 CCSER2 (ENSRFEG00010020289) #14 ENSRFEG00010020355 GRID1 (ENSRFEG00010020370) #17 ENSRFEG00010020391 WAPL (ENSRFEG00010020421) #18 OPN4 (ENSRFEG00010020490) #19 LDB3 (ENSRFEG00010020559) #20 BMPR1A (ENSRFEG00010020664) #22 ENSRFEG00010020689 MMRN2 (ENSRFEG00010020706) #23 SNCG (ENSRFEG00010020732) #24 ENSRFEG00010020750 ENSRFEG00010020761 #25 ENSRFEG00010020776 ##26 SHLD2 (ENSRFEG00010020825) #27 ENSRFEG00010020855 #28 GPRIN2 (ENSRFEG00010020875) #29 ENSRFEG00010020880 #30 ZNF488 (ENSRFEG00010020883) #36 RBP3 (ENSRFEG00010020893) #37 GDF2 (ENSRFEG00010020905) GDF10 (ENSRFEG00010020914) PTPN20 (ENSRFEG00010020938) Microbat MODERN SPECIES 1235 WAPL (ENSMLUG00000006613) #18 OPN4 (ENSMLUG00000004967) #19 LDB3 (ENSMLUG00000004982) #20 BMPR1A (ENSMLUG00000009947) #22 MMRN2 (ENSMLUG00000009978) #23 SNCG (ENSMLUG00000010000) #24 ENSMLUG00000011268 #26 SHLD2 (ENSMLUG00000007456) #27 ENSMLUG00000002953 #30 ENSMLUG00000024583 Eulipotyphla ANCESTRAL SPECIES 1743 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 Common shrew MODERN SPECIES 1621 LDB3 (ENSSARG00000001530) #20 BMPR1A (ENSSARG00000001581) #22 Hedgehog MODERN SPECIES 1070 BMPR1A (ENSEEUG00000012417) #22 Atlantogenata ANCESTRAL SPECIES 10 ENSGT00510000048896 ENSGT00390000000046 ENSGT00390000007221.a.b ENSGT00950000182815.a.a.a.b ENSGT00950000182898.a.a.b ENSGT01050000244940.a.b #8 ENSGT00940000155509 #10 ENSGT00940000159143 #11 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 Xenarthra ANCESTRAL SPECIES 237 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00940000161927 #30 ENSGT00940000161044 #31 Armadillo MODERN SPECIES 4546 GRID1 (ENSDNOG00000042469) #17 ENSDNOG00000031581 WAPL (ENSDNOG00000025433) #18 ENSDNOG00000033237 OPN4 (ENSDNOG00000048882) #19 LDB3 (ENSDNOG00000000562) #20 BMPR1A (ENSDNOG00000016718) #22 ENSDNOG00000041147 #23 SNCG (ENSDNOG00000031102) #24 ADIRF (ENSDNOG00000033404) ENSDNOG00000005224 #25 ENSDNOG00000043039 #26 ENSDNOG00000000017 #27 ENSDNOG00000046427 #28 GPRIN2 (ENSDNOG00000016039) #29 ENSDNOG00000038129 ENSDNOG00000018174 #30 ENSDNOG00000045634 #31 Sloth MODERN SPECIES 841 BMPR1A (ENSCHOG00000006320) #22 Afrotheria ANCESTRAL SPECIES 133 ENSGT00940000161631 ENSGT00940000162091 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00940000155509 #10 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 Tenrec MODERN SPECIES 6670 ENSETEG00000007037 #22 Afrotheria_a ANCESTRAL SPECIES 136 ENSGT00940000161631 ENSGT00940000162091 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b #7 ENSGT01050000244940.a.b #8 ENSGT00940000155509 #10 ENSGT00940000156033 #12 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000017446 ENSGT00390000000786 #25 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 Elephant MODERN SPECIES 491 PRXL2A (ENSLAFG00000004468) TSPAN14 (ENSLAFG00000016406) SH2D4B (ENSLAFG00000006817) ENSLAFG00000026283 #7 GHITM (ENSLAFG00000009646) #8 CDHR1 (ENSLAFG00000014034) #10 LRIT1 (ENSLAFG00000028695) #12 RGR (ENSLAFG00000014674) #13 CCSER2 (ENSLAFG00000011324) #14 ENSLAFG00000008310 #17 WAPL (ENSLAFG00000005848) #18 ENSLAFG00000023317 ENSLAFG00000011624 OPN4 (ENSLAFG00000006004) #19 LDB3 (ENSLAFG00000006009) #20 BMPR1A (ENSLAFG00000005832) #22 MMRN2 (ENSLAFG00000012825) #23 SNCG (ENSLAFG00000032751) #24 ENSLAFG00000011199 #25 ENSLAFG00000012059 #26 SHLD2 (ENSLAFG00000022147) #27 ENSLAFG00000016206 #28 GPRIN2 (ENSLAFG00000016467) #29 MRPS24 (ENSLAFG00000011905) URGCP (ENSLAFG00000031339) DBNL (ENSLAFG00000004682) PGAM2 (ENSLAFG00000026429) POLM (ENSLAFG00000010390) AEBP1 (ENSLAFG00000014436) POLD2 (ENSLAFG00000022905) MYL7 (ENSLAFG00000022961) Hyrax MODERN SPECIES 781 BMPR1A (ENSPCAG00000013254) #22 Marsupialia ANCESTRAL SPECIES ENSGT00950000183076.a.b.b.a.a ENSGT00390000010652.C ENSGT00940000156111 ENSGT00940000158282 ENSGT00940000155716 ENSGT00940000153997.b.a.a ENSGT00940000154371.b.i.b ENSGT00940000154371.b.i.a ENSGT00940000153912.A #14 ENSGT00940000156068.b ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00940000163402.b.a.a.a.a ENSGT00950000182965.a.b.b.a.b ENSGT01030000234534.B.a.b ENSGT00940000159819 ENSGT00940000157737 ENSGT00940000160977 ENSGT00940000157327 ENSGT00950000182989.A ENSGT00940000160380 ENSGT00940000155707 ENSGT00940000153533.a ENSGT00940000159422 ENSGT00940000157796 Marsupialia_b ANCESTRAL SPECIES ENSGT00950000183076.a.b.b.a.a ENSGT00390000010652.C ENSGT00940000156111 ENSGT00940000158282.f ENSGT00940000155716 ENSGT00940000153997.b.a.a ENSGT00940000154371.b.i.b ENSGT00940000154371.b.i.a ENSGT00940000153912.A #14 ENSGT00940000156068.b ENSGT00940000155910.g #17 ENSGT00390000015768 #18 ENSGT00940000154612.l ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00940000163402.b.a.a.a.a ENSGT00950000182965.a.b.b.a.b ENSGT01030000234534.B.a.b ENSGT00940000159819 ENSGT00940000157737 ENSGT00940000160977 ENSGT00940000157327 ENSGT00950000182989.A ENSGT00940000160380 ENSGT00940000155707 ENSGT00940000153533.a ENSGT00940000159422 ENSGT00940000157796 Diprotodontia ANCESTRAL SPECIES 6 ENSGT00390000014666.b ENSGT00940000163116 ENSGT00950000183076.a.b.b.a.a ENSGT00390000010652.C ENSGT00940000156111 ENSGT00940000158282.f ENSGT00940000155716 ENSGT00940000153997.b.a.a ENSGT00940000153912.A #14 ENSGT00940000156068.b ENSGT00940000155910.g #17 ENSGT00390000015768 #18 ENSGT00940000154612.l ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00940000163402.b.a.a.a.a Diprotodontia_a ANCESTRAL SPECIES 7 ENSGT00950000183076.a.b.b.a.a ENSGT00390000010652.C ENSGT00940000156111 ENSGT00940000158282.f ENSGT00940000155716 ENSGT00940000153997.b.a.a ENSGT00940000154371.b.i.b.a.b ENSGT00940000154371.b.i.b.b ENSGT00940000153912.A #14 ENSGT00940000156068.b ENSGT00940000155910.g #17 ENSGT00390000015768 #18 ENSGT00940000154612.l ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00940000163402.b.a.a.a.a Common wonbat MODERN SPECIES 1179 ALOX5 (ENSVURG00010015696) MARCHF8 (ENSVURG00010015718) ZFAND4 (ENSVURG00010015731) ENSVURG00010015759 ENSVURG00010015818 ENSVURG00010015821 ENSVURG00010015823 CCSER2 (ENSVURG00010015832) #14 ENSVURG00010015860 ENSVURG00010015877 ENSVURG00010015882 #17 WAPL (ENSVURG00010015908) #18 ENSVURG00010015969 OPN4 (ENSVURG00010015982) #19 LDB3 (ENSVURG00010015994) #20 BMPR1A (ENSVURG00010016012) #22 ENSVURG00010016018 #23 SNCG (ENSVURG00010016027) #24 ENSVURG00010016053 koala MODERN SPECIES 57 ENSPCIG00000031656 ALOX5 (ENSPCIG00000022662) MARCHF8 (ENSPCIG00000022658) ZFAND4 (ENSPCIG00000022651) ENSPCIG00000022605 ENSPCIG00000036580 ENSPCIG00000020917 ENSPCIG00000020916 CCSER2 (ENSPCIG00000020913) #14 ENSPCIG00000020912 GRID1 (ENSPCIG00000032856) #17 WAPL (ENSPCIG00000013332) #18 ENSPCIG00000017426 OPN4 (ENSPCIG00000000750) #19 LDB3 (ENSPCIG00000031216) #20 BMPR1A (ENSPCIG00000011599) #22 ENSPCIG00000024470 #23 ENSPCIG00000024473 #24 Tasmanian devil MODERN SPECIES 1 ENSSHAG00000024244 ENSSHAG00000027720 ENSSHAG00000022795 ENSSHAG00000002064 ENSSHAG00000023219 ENSSHAG00000029057 ENSSHAG00000015607 #14 ENSSHAG00000028704 #14 ENSSHAG00000029846 ENSSHAG00000007904 #17 ENSSHAG00000023967 #17 WAPL (ENSSHAG00000009610) #18 ENSSHAG00000009404 OPN4 (ENSSHAG00000008435) #19 LDB3 (ENSSHAG00000007310) #20 BMPR1A (ENSSHAG00000005672) #22 ENSSHAG00000004694 #23 ENSSHAG00000004383 #24 ENSSHAG00000002530 ENSSHAG00000000967 ENSSHAG00000028319 ENSSHAG00000021979 ENSSHAG00000025673 ENSSHAG00000018484 ENSSHAG00000018402 ENSSHAG00000023911 ENSSHAG00000018208 ENSSHAG00000021263 ENSSHAG00000018008 CIB2 (ENSSHAG00000017984) IDH3A (ENSSHAG00000024011) Opossum MODERN SPECIES ENSMODG00000025717 ENSMODG00000042938 ENSMODG00000045956 ENSMODG00000029353 ENSMODG00000028868 ENSMODG00000040275 CCSER2 (ENSMODG00000010952) #14 ENSMODG00000010954 ENSMODG00000051387 ENSMODG00000029662 GRID1 (ENSMODG00000011030) #17 ENSMODG00000028223 WAPL (ENSMODG00000011102) #18 OPN4 (ENSMODG00000011114) #19 LDB3 (ENSMODG00000011146) #20 BMPR1A (ENSMODG00000011158) #22 ENSMODG00000011163 #23 SNCG (ENSMODG00000046065) #24 ENSMODG00000011252 ENSMODG00000011489 ENSMODG00000011517 ENSMODG00000025367 ADAMTS7 (ENSMODG00000011540) ENSMODG00000048142 TBC1D2B (ENSMODG00000011556) CIB2 (ENSMODG00000011624) IDH3A (ENSMODG00000011642) ACSBG1 (ENSMODG00000011666) DNAJA4 (ENSMODG00000011688) SKIC8 (ENSMODG00000011702) CRABP1 (ENSMODG00000011710) Platypus MODERN SPECIES 14 DNAJB12 (ENSOANG00000046292) MICU1 (ENSOANG00000001130) MCU (ENSOANG00000001129) OIT3 (ENSOANG00000029925) PLA2G12B (ENSOANG00000046451) P4HA1 (ENSOANG00000001125) ENSOANG00000001123 ECD (ENSOANG00000001121) FAM149B1 (ENSOANG00000001119) DNAJC9 (ENSOANG00000037219) CCSER2 (ENSOANG00000001117) #14 GRID1 (ENSOANG00000014787) #17 WAPL (ENSOANG00000030929) #18 ENSOANG00000010446 #19 LDB3 (ENSOANG00000008906) #20 BMPR1A (ENSOANG00000036756) #22 TMEM267 (ENSOANG00000042358) C5orf34 (ENSOANG00000008911) PAIP1 (ENSOANG00000007984) NNT (ENSOANG00000014892) FGF10 (ENSOANG00000042795) MRPS30 (ENSOANG00000001659) MAT1A (ENSOANG00000001657) DYDC1 (ENSOANG00000004121) ENSOANG00000045463 ENSOANG00000010863 TSPAN14 (ENSOANG00000010864) SH2D4B (ENSOANG00000010865) ENSOANG00000043336 #7 GHITM (ENSOANG00000005402) #8 CDHR1 (ENSOANG00000007464) #10 Sauria ANCESTRAL SPECIES 8 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00940000160064.a.a ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 Lepidosauria ANCESTRAL SPECIES 8 ENSGT00940000159995 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 Episquamata ANCESTRAL SPECIES 2 ENSGT00940000159995 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 Laterata ANCESTRAL SPECIES ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00950000186100 ENSGT00530000064550.B ENSGT00940000160064.a.a ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 Common wall lizard MODERN SPECIES 13 ENSPMRG00000006559 ENSPMRG00000006552 ENSPMRG00000006544 FAM13C (ENSPMRG00000006533) PHYHIPL (ENSPMRG00000006517) BICC1 (ENSPMRG00000006483) ENSPMRG00000006463 CCSER2 (ENSPMRG00000006451) #14 GRID1 (ENSPMRG00000006438) #17 ENSPMRG00000006430 ENSPMRG00000006424 ENSPMRG00000006414 WAPL (ENSPMRG00000006212) #18 OPN4 (ENSPMRG00000006154) #19 LDB3 (ENSPMRG00000006017) ##20 BMPR1A (ENSPMRG00000005964) #22 MMRN2 (ENSPMRG00000005946) #23 SNCG (ENSPMRG00000005935) #24 ENSPMRG00000005926 #26 SHLD2 (ENSPMRG00000005909) #27 ENSPMRG00000005898 #28 GPRIN2 (ENSPMRG00000005896) #29 ENSPMRG00000005888 NCOA4 (ENSPMRG00000005881) ENSPMRG00000005870 PARG (ENSPMRG00000005853) OGDHL (ENSPMRG00000005810) C10orf53 (ENSPMRG00000005793) CHAT (ENSPMRG00000005752) ENSPMRG00000005735 RGR (ENSPMRG00000005722) #13 Argentine black and white tegu MODERN SPECIES 56 GRID1 (ENSSMRG00000007230) #17 ENSSMRG00000007423 ENSSMRG00000007429 ENSSMRG00000007434 ENSSMRG00000007442 WAPL (ENSSMRG00000007443) #18 OPN4 (ENSSMRG00000007460) #19 LDB3 (ENSSMRG00000007469) ##20 BMPR1A (ENSSMRG00000007499) #22 MMRN2 (ENSSMRG00000007508) #23 SNCG (ENSSMRG00000007512) #24 ENSSMRG00000007530 #26 SHLD2 (ENSSMRG00000007539) #27 ENSSMRG00000007543 #28 GPRIN2 (ENSSMRG00000007545) #29 ENSSMRG00000007546 NCOA4 (ENSSMRG00000007552) ENSSMRG00000007558 PARG (ENSSMRG00000007574) OGDHL (ENSSMRG00000007582) C10orf53 (ENSSMRG00000007595) CHAT (ENSSMRG00000007598) SLC18A3 (ENSSMRG00000007600) RGR (ENSSMRG00000007601) #13 Toxicofera ANCESTRAL SPECIES 2 ENSGT00940000159995 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910.o.a #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 Elapidae ANCESTRAL SPECIES 4 ENSGT00940000159995 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A.i #14 ENSGT00940000155910.o.a #17 ENSGT00390000015768 #18 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000158394 ENSGT00390000014082.b ENSGT00530000063713.a ENSGT00940000157470 ENSGT00940000164426 ENSGT01030000234543.D.b ENSGT00940000158184 ENSGT00390000014320 ENSGT00940000157372.f ENSGT00940000160190 ENSGT00940000154628.B Elapidae_a ANCESTRAL SPECIES 85 ENSGT00940000159995 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A.i #14 ENSGT00940000155910.o.a #17 ENSGT00390000015768 #18 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 Acanthophiinae ANCESTRAL SPECIES 70 ENSGT00940000159995 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A.i #14 ENSGT00940000155910.o.a #17 ENSGT00390000015768 #18 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00390000000984 ENSGT00530000063713.a ENSGT00940000157470 ENSGT00940000164426 ENSGT01030000234543.D.b ENSGT00940000158184.l ENSGT00390000014320 ENSGT00940000157372.f ENSGT00940000160190 ENSGT00940000154628.B ENSGT00940000162682.A.a.b ENSGT00940000155540.b.b Eastern brown snake MODERN SPECIES 50 RHOBTB1 (ENSPTXG00000004088) CDK1 (ENSPTXG00000004089) ANK3 (ENSPTXG00000004124) CCDC6 (ENSPTXG00000017810) SLC16A9 (ENSPTXG00000017811) ENSPTXG00000017812 FAM13C (ENSPTXG00000017813) PHYHIPL (ENSPTXG00000017814) BICC1 (ENSPTXG00000017815) ENSPTXG00000017885 CCSER2 (ENSPTXG00000017886) #14 GRID1 (ENSPTXG00000017888) #17 WAPL (ENSPTXG00000017890) #18 ENSPTXG00000017984 #20 ENSPTXG00000017986 ##20 BMPR1A (ENSPTXG00000017987) #22 MMRN2 (ENSPTXG00000017993) #23 ENSPTXG00000017997 #26 SHLD2 (ENSPTXG00000017999) #27 ENSPTXG00000018001 ENSPTXG00000018003 ENSPTXG00000018006 ENSPTXG00000018007 ADK (ENSPTXG00000018009) ENSPTXG00000018015 ENSPTXG00000018016 ENSPTXG00000018017 DUSP29 (ENSPTXG00000018019) DUSP13 (ENSPTXG00000018020) ENSPTXG00000018022 ENSPTXG00000018028 Mainland tiger snake MODERN SPECIES 60 ENSNSUG00000020145 ENSNSUG00000020144 CCDC6 (ENSNSUG00000020143) SLC16A9 (ENSNSUG00000020142) ENSNSUG00000020141 FAM13C (ENSNSUG00000020140) PHYHIPL (ENSNSUG00000020139) BICC1 (ENSNSUG00000020138) ENSNSUG00000020137 CCSER2 (ENSNSUG00000020135) #14 GRID1 (ENSNSUG00000020132) #17 WAPL (ENSNSUG00000020088) #18 ENSNSUG00000020087 ENSNSUG00000020086 #20 ENSNSUG00000020085 ##20 BMPR1A (ENSNSUG00000020083) #22 MMRN2 (ENSNSUG00000020082) #23 ENSNSUG00000020081 ENSNSUG00000020079 #26 SHLD2 (ENSNSUG00000020078) #27 NRBF2 (ENSNSUG00000020077) ZNF365 (ENSNSUG00000020076) ENSNSUG00000020075 ENSNSUG00000020074 VCL (ENSNSUG00000020072) AP3M1 (ENSNSUG00000020071) ADK (ENSNSUG00000020070) ENSNSUG00000020069 ENSNSUG00000020068 DUSP29 (ENSNSUG00000020066) ENSNSUG00000020065 Blue-lipped sea krait MODERN SPECIES 2852 BMPR1A (ENSLLTG00000016901) #22 ENSLLTG00000016903 #23 Indian cobra MODERN SPECIES 3 RHOBTB1 (ENSNNAG00000016035) ANK3 (ENSNNAG00000016271) CCDC6 (ENSNNAG00000017939) SLC16A9 (ENSNNAG00000017949) ENSNNAG00000017952 FAM13C (ENSNNAG00000017954) PHYHIPL (ENSNNAG00000017962) BICC1 (ENSNNAG00000017967) ENSNNAG00000017977 CCSER2 (ENSNNAG00000017985) #14 ENSNNAG00000018008 GRID1 (ENSNNAG00000018016) #17 WAPL (ENSNNAG00000018052) #18 ENSNNAG00000018074 #20 ENSNNAG00000018086 ##20 BMPR1A (ENSNNAG00000018090) #22 MMRN2 (ENSNNAG00000003069) #23 SNCG (ENSNNAG00000003079) #24 ENSNNAG00000003089 #26 ENSNNAG00000003109 #27 EGR2 (ENSNNAG00000003126) ADO (ENSNNAG00000003138) ZNF365 (ENSNNAG00000003154) RTKN2 (ENSNNAG00000003167) ENSNNAG00000003188 ENSNNAG00000003212 VCL (ENSNNAG00000003234) AP3M1 (ENSNNAG00000003266) ADK (ENSNNAG00000003283) KAT6B (ENSNNAG00000003335) DUSP29 (ENSNNAG00000003367) Lizard MODERN SPECIES 813 ENSACAG00000038784 ##20 ENSACAG00000014492 ##20 BMPR1A (ENSACAG00000014543) #22 ENSACAG00000034918 MMRN2 (ENSACAG00000014748) #23 SNCG (ENSACAG00000014759) #24 ENSACAG00000014769 #26 SHLD2 (ENSACAG00000014871) #27 ENSACAG00000014901 #28 ENSACAG00000045025 GPRIN2 (ENSACAG00000014929) #29 ENSACAG00000038376 ENSACAG00000036950 ENSACAG00000041985 ENSACAG00000029003 PARG (ENSACAG00000015000) ENSACAG00000036187 OGDHL (ENSACAG00000015082) tuatara MODERN SPECIES 926 BMPR1A (ENSSPUG00000006099) #22 SNCG (ENSSPUG00000006142) #24 ENSSPUG00000006153 ENSSPUG00000006159 #26 ENSSPUG00000006169 #27 ENSSPUG00000006178 #27 ENSSPUG00000006203 #28 ENSSPUG00000006219 #29 ENSSPUG00000006226 NCOA4 (ENSSPUG00000006239) ENSSPUG00000006246 PARG (ENSSPUG00000006276) Archelosauria ANCESTRAL SPECIES 10 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00940000160064.a.a ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 Archosauria ANCESTRAL SPECIES 7 ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 Aves ANCESTRAL SPECIES 6 ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000156033 #12 Neognathae ANCESTRAL SPECIES 7 ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000156033 #12 Neognathae_b ANCESTRAL SPECIES 8 ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00960000189706 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000156033 #12 Passeriformes ANCESTRAL SPECIES 10 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00960000189706 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000156033 #12 Great tit MODERN SPECIES 26 TMEM26 (ENSPMJG00000015414) RHOBTB1 (ENSPMJG00000015418) CDK1 (ENSPMJG00000015419) ANK3 (ENSPMJG00000015421) CCDC6 (ENSPMJG00000015422) SLC16A9 (ENSPMJG00000015424) FAM13C (ENSPMJG00000015425) PHYHIPL (ENSPMJG00000015426) BICC1 (ENSPMJG00000015427) ENSPMJG00000015428 CCSER2 (ENSPMJG00000015429) #14 GRID1 (ENSPMJG00000015434) #17 WAPL (ENSPMJG00000015436) #18 OPN4 (ENSPMJG00000015437) #19 LDB3 (ENSPMJG00000015439) ##20 BMPR1A (ENSPMJG00000015440) #22 MMRN2 (ENSPMJG00000015441) #23 SNCG (ENSPMJG00000015442) #24 ENSPMJG00000015445 #26 SHLD2 (ENSPMJG00000015446) #27 ENSPMJG00000015447 #28 ENSPMJG00000015449 #29 NCOA4 (ENSPMJG00000015450) ENSPMJG00000015451 PARG (ENSPMJG00000015453) OGDHL (ENSPMJG00000015454) CHAT (ENSPMJG00000015456) SLC18A3 (ENSPMJG00000015457) RGR (ENSPMJG00000015458) #13 LRIT1 (ENSPMJG00000015459) #12 LRIT2 (ENSPMJG00000015460) #11 Passeriformes_d ANCESTRAL SPECIES 7 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00960000189706 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000156033 #12 Passeriformes_g ANCESTRAL SPECIES 8 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00960000189706 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000156033 #12 Passeroidea ANCESTRAL SPECIES 7 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00960000189706 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000156033 #12 Common canary MODERN SPECIES 7 RHOBTB1 (ENSSCAG00000003777) CDK1 (ENSSCAG00000003772) ANK3 (ENSSCAG00000003722) CCDC6 (ENSSCAG00000003683) SLC16A9 (ENSSCAG00000003669) ENSSCAG00000003664 FAM13C (ENSSCAG00000003651) PHYHIPL (ENSSCAG00000003646) BICC1 (ENSSCAG00000003632) CCSER2 (ENSSCAG00000003626) #14 GRID1 (ENSSCAG00000003610) #17 WAPL (ENSSCAG00000003589) #18 OPN4 (ENSSCAG00000003560) #19 LDB3 (ENSSCAG00000003542) #20 ENSSCAG00000003507 ##20 BMPR1A (ENSSCAG00000003502) #22 SNCG (ENSSCAG00000003499) #24 MMRN2 (ENSSCAG00000003491) #23 ENSSCAG00000003430 #26 SHLD2 (ENSSCAG00000003407) #27 ENSSCAG00000003398 #28 GPRIN2 (ENSSCAG00000003385) #29 NCOA4 (ENSSCAG00000003372) ENSSCAG00000003354 PARG (ENSSCAG00000003216) OGDHL (ENSSCAG00000003178) ENSSCAG00000003174 CHAT (ENSSCAG00000003169) SLC18A3 (ENSSCAG00000003166) RGR (ENSSCAG00000003160) #13 LRIT1 (ENSSCAG00000003156) #12 Zebra finch MODERN SPECIES 28 RHOBTB1 (ENSTGUG00000005309) CDK1 (ENSTGUG00000005332) ANK3 (ENSTGUG00000005344) CCDC6 (ENSTGUG00000005517) SLC16A9 (ENSTGUG00000005527) FAM13C (ENSTGUG00000005544) PHYHIPL (ENSTGUG00000005576) BICC1 (ENSTGUG00000005584) ENSTGUG00000026694 CCSER2 (ENSTGUG00000027495) #14 GRID1 (ENSTGUG00000005621) #17 WAPL (ENSTGUG00000005657) #18 OPN4 (ENSTGUG00000005687) #19 ENSTGUG00000005701 #20 ENSTGUG00000029529 ##20 BMPR1A (ENSTGUG00000005714) #22 MMRN2 (ENSTGUG00000005738) #23 SNCG (ENSTGUG00000005741) #24 ENSTGUG00000005750 #26 SHLD2 (ENSTGUG00000028097) #27 ENSTGUG00000005816 #29 ENSTGUG00000005802 #28 NCOA4 (ENSTGUG00000005818) ENSTGUG00000024616 PARG (ENSTGUG00000005848) OGDHL (ENSTGUG00000005897) CHAT (ENSTGUG00000005959) SLC18A3 (ENSTGUG00000005989) LRIT1 (ENSTGUG00000006007) #12 RGR (ENSTGUG00000005992) #13 LRIT2 (ENSTGUG00000006014) #11 Medium ground finch MODERN SPECIES 3 ENSGFOG00000014753 GRID1 (ENSGFOG00000014749) #17 WAPL (ENSGFOG00000014739) #18 OPN4 (ENSGFOG00000014737) #19 ENSGFOG00000014734 #20 BMPR1A (ENSGFOG00000014731) #22 MMRN2 (ENSGFOG00000014728) #23 SNCG (ENSGFOG00000014726) #24 ENSGFOG00000014723 #26 SHLD2 (ENSGFOG00000014722) #27 ENSGFOG00000014720 #28 ENSGFOG00000014717 #29 NCOA4 (ENSGFOG00000014714) ENSGFOG00000014710 PARG (ENSGFOG00000014707) OGDHL (ENSGFOG00000014702) ENSGFOG00000014701 CHAT (ENSGFOG00000014698) SLC18A3 (ENSGFOG00000014697) RGR (ENSGFOG00000014695) #13 LRIT1 (ENSGFOG00000014692) #12 Flycatcher MODERN SPECIES 25 RHOBTB1 (ENSFALG00000013316) CDK1 (ENSFALG00000013320) ANK3 (ENSFALG00000013352) CCDC6 (ENSFALG00000002256) SLC16A9 (ENSFALG00000002254) ENSFALG00000002252 FAM13C (ENSFALG00000002251) PHYHIPL (ENSFALG00000023335) BICC1 (ENSFALG00000002247) ENSFALG00000002246 CCSER2 (ENSFALG00000002244) #14 GRID1 (ENSFALG00000006632) #17 WAPL (ENSFALG00000006637) #18 OPN4 (ENSFALG00000006645) #19 LDB3 (ENSFALG00000006660) ##20 BMPR1A (ENSFALG00000006680) #22 MMRN2 (ENSFALG00000006694) #23 SNCG (ENSFALG00000006698) #24 ENSFALG00000006708 #26 SHLD2 (ENSFALG00000006729) #27 ENSFALG00000006734 #28 ENSFALG00000006738 #29 ENSFALG00000006744 ENSFALG00000006749 PARG (ENSFALG00000006752) OGDHL (ENSFALG00000006758) ENSFALG00000024801 CHAT (ENSFALG00000006774) SLC18A3 (ENSFALG00000006793) RGR (ENSFALG00000006797) #13 LRIT1 (ENSFALG00000006804) #12 Neognathae_c ANCESTRAL SPECIES 8 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000156033 #12 ENSGT00940000159143 #11 Kakapo MODERN SPECIES 22 ENSSHBG00005009384 CCDC6 (ENSSHBG00005009374) SLC16A9 (ENSSHBG00005009362) ENSSHBG00005009350 FAM13C (ENSSHBG00005009336) PHYHIPL (ENSSHBG00005009322) BICC1 (ENSSHBG00005009291) ENSSHBG00005009277 CCSER2 (ENSSHBG00005009269) #14 ENSSHBG00005009262 GRID1 (ENSSHBG00005009153) #17 ENSSHBG00005009103 WAPL (ENSSHBG00005009076) #18 OPN4 (ENSSHBG00005009019) #19 LDB3 (ENSSHBG00005008710) ##20 BMPR1A (ENSSHBG00005008673) #22 MMRN2 (ENSSHBG00005008667) #23 SNCG (ENSSHBG00005008661) #24 ENSSHBG00005008655 #26 SHLD2 (ENSSHBG00005008639) #27 ENSSHBG00005008628 #28 ENSSHBG00005008622 #29 NCOA4 (ENSSHBG00005008606) ENSSHBG00005008599 PARG (ENSSHBG00005008585) OGDHL (ENSSHBG00005008575) CHAT (ENSSHBG00005008537) SLC18A3 (ENSSHBG00005008532) RGR (ENSSHBG00005008522) #13 LRIT1 (ENSSHBG00005008514) #12 LRIT2 (ENSSHBG00005008512) #11 Golden eagle MODERN SPECIES 2 RHOBTB1 (ENSACCG00020001933) CDK1 (ENSACCG00020001913) ANK3 (ENSACCG00020001733) CCDC6 (ENSACCG00020001637) SLC16A9 (ENSACCG00020001608) ENSACCG00020001594 FAM13C (ENSACCG00020001578) PHYHIPL (ENSACCG00020001564) BICC1 (ENSACCG00020001541) ENSACCG00020001525 CCSER2 (ENSACCG00020001488) #14 GRID1 (ENSACCG00020001452) #17 WAPL (ENSACCG00020001216) #18 OPN4 (ENSACCG00020001169) #19 LDB3 (ENSACCG00020001082) ##20 BMPR1A (ENSACCG00020001010) #22 MMRN2 (ENSACCG00020000985) #23 SNCG (ENSACCG00020000966) #24 ENSACCG00020000948 #26 SHLD2 (ENSACCG00020000930) #27 ENSACCG00020000910 #28 ENSACCG00020000898 #29 NCOA4 (ENSACCG00020000878) ENSACCG00020000854 PARG (ENSACCG00020000827) OGDHL (ENSACCG00020000780) CHAT (ENSACCG00020000693) SLC18A3 (ENSACCG00020000659) RGR (ENSACCG00020000634) #13 LRIT1 (ENSACCG00020000615) #12 LRIT2 (ENSACCG00020000584) #11 Galloanserae ANCESTRAL SPECIES 6 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000156033 #12 Anatidae ANCESTRAL SPECIES 4 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00940000165908 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00570000079168.b.a #29 ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000156033 #12 ENSGT00940000159143 #11 Duck MODERN SPECIES 24 ENSAPLG00000028830 ENSAPLG00000010455 CDK1 (ENSAPLG00000010270) ANK3 (ENSAPLG00000008610) CCDC6 (ENSAPLG00000008230) SLC16A9 (ENSAPLG00000008084) FAM13C (ENSAPLG00000015441) PHYHIPL (ENSAPLG00000015409) BICC1 (ENSAPLG00000015162) ENSAPLG00000015155 CCSER2 (ENSAPLG00000014916) #14 ENSAPLG00000031257 GRID1 (ENSAPLG00000014832) #17 WAPL (ENSAPLG00000014722) #18 LDB3 (ENSAPLG00000014462) ##20 BMPR1A (ENSAPLG00000013998) #22 MMRN2 (ENSAPLG00000013958) #23 SNCG (ENSAPLG00000013906) #24 ENSAPLG00000013478 #26 SHLD2 (ENSAPLG00000013430) #27 ENSAPLG00000002369 #29 NCOA4 (ENSAPLG00000013221) ENSAPLG00000013120 PARG (ENSAPLG00000013100) OGDHL (ENSAPLG00000012565) C10orf53 (ENSAPLG00000022667) CHAT (ENSAPLG00000012172) RGR (ENSAPLG00000011960) #13 LRIT1 (ENSAPLG00000011953) #12 LRIT2 (ENSAPLG00000011945) #11 CDHR1 (ENSAPLG00000011604) #10 Pink-footed goose MODERN SPECIES 19 CDK1 (ENSABRG00000020817) ANK3 (ENSABRG00000021305) CCDC6 (ENSABRG00000022191) SLC16A9 (ENSABRG00000022195) ENSABRG00000022196 FAM13C (ENSABRG00000022199) PHYHIPL (ENSABRG00000022205) BICC1 (ENSABRG00000022208) ENSABRG00000022211 CCSER2 (ENSABRG00000022214) #14 GRID1 (ENSABRG00000022242) #17 ENSABRG00000022244 WAPL (ENSABRG00000022247) #18 OPN4 (ENSABRG00000022284) #19 LDB3 (ENSABRG00000022292) ##20 BMPR1A (ENSABRG00000022297) #22 MMRN2 (ENSABRG00000022299) #23 SNCG (ENSABRG00000022300) #24 ENSABRG00000022307 #26 SHLD2 (ENSABRG00000022323) #27 ENSABRG00000022324 #29 NCOA4 (ENSABRG00000022326) ENSABRG00000022327 PARG (ENSABRG00000022333) OGDHL (ENSABRG00000022371) ENSABRG00000022455 CHAT (ENSABRG00000022456) SLC18A3 (ENSABRG00000022459) RGR (ENSABRG00000000739) #13 LRIT1 (ENSABRG00000000755) #12 LRIT2 (ENSABRG00000000779) #11 Phasianidae ANCESTRAL SPECIES 6 ENSGT00390000014794.b ENSGT00940000159995.v ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00960000189069 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000156033 #12 Japanese quail MODERN SPECIES 24 FAM13C (ENSCJPG00005012302) PHYHIPL (ENSCJPG00005012304) BICC1 (ENSCJPG00005012305) CCSER2 (ENSCJPG00005012310) #14 ENSCJPG00005012311 GRID1 (ENSCJPG00005012320) #17 ENSCJPG00005012328 WAPL (ENSCJPG00005012332) #18 OPN4 (ENSCJPG00005012334) #19 LDB3 (ENSCJPG00005012352) ##20 BMPR1A (ENSCJPG00005012357) #22 MMRN2 (ENSCJPG00005012358) #23 SNCG (ENSCJPG00005012359) #24 ENSCJPG00005012360 ENSCJPG00005012361 #26 SHLD2 (ENSCJPG00005012362) #27 ENSCJPG00005012363 #28 ENSCJPG00005012364 #29 NCOA4 (ENSCJPG00005012365) ENSCJPG00005012366 PARG (ENSCJPG00005012368) OGDHL (ENSCJPG00005012575) CHAT (ENSCJPG00005012577) SLC18A3 (ENSCJPG00005012637) RGR (ENSCJPG00005012638) #13 LRIT1 (ENSCJPG00005012640) #12 Phasianidae_b ANCESTRAL SPECIES 6 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416.f ENSGT00950000183033.b ENSGT00940000156416.e ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00960000189069 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 ENSGT00940000156033 #12 Chicken MODERN SPECIES 35 ENSGALG00010009796 ENSGALG00010009822 ENSGALG00010009840 ENSGALG00010009883 ENSGALG00010009920 ENSGALG00010009993 FAM13C (ENSGALG00010010127) PHYHIPL (ENSGALG00010010185) BICC1 (ENSGALG00010010226) ENSGALG00010010234 CCSER2 (ENSGALG00010010267) #14 GRID1 (ENSGALG00010010313) #17 WAPL (ENSGALG00010010333) #18 OPN4 (ENSGALG00010010341) #19 LDB3 (ENSGALG00010010438) ##20 BMPR1A (ENSGALG00010010465) #22 MMRN2 (ENSGALG00010010472) #23 SNCG (ENSGALG00010010521) #24 ADIRF (ENSGALG00010010541) GLUD2 (ENSGALG00010010578) #26 SHLD2 (ENSGALG00010010596) #27 GPRIN2 (ENSGALG00010010698) #29 ENSGALG00010010711 #28 NCOA4 (ENSGALG00010010749) TIMM23B (ENSGALG00010010768) PARG (ENSGALG00010010780) OGDHL (ENSGALG00010010822) ENSGALG00010010830 CHAT (ENSGALG00010010839) SLC18A3 (ENSGALG00010011152) RGR (ENSGALG00010010848) #13 Turkey MODERN SPECIES 28 ENSMGAG00000003671 ENSMGAG00000003706 ENSMGAG00000003748 ENSMGAG00000018295 ENSMGAG00000022108 #14 ENSMGAG00000002692 #14 ENSMGAG00000002715 BICC1 (ENSMGAG00000002729) ENSMGAG00000018755 ENSMGAG00000002772 ENSMGAG00000002785 ENSMGAG00000020940 #17 WAPL (ENSMGAG00000002579) #18 OPN4 (ENSMGAG00000002543) #19 LDB3 (ENSMGAG00000002507) ##20 BMPR1A (ENSMGAG00000002464) #22 MMRN2 (ENSMGAG00000002452) #23 SNCG (ENSMGAG00000002416) #24 ENSMGAG00000020477 ENSMGAG00000002437 #26 SHLD2 (ENSMGAG00000002403) #27 ENSMGAG00000002378 #28 ENSMGAG00000016165 #29 ENSMGAG00000002354 ENSMGAG00000019927 PARG (ENSMGAG00000002289) OGDHL (ENSMGAG00000002206) CHAT (ENSMGAG00000002171) RGR (ENSMGAG00000002156) #13 LRIT1 (ENSMGAG00000002140) #12 ENSMGAG00000017258 #11 African ostrich MODERN SPECIES 210 GRID1 (ENSSCUG00000003026) #17 ENSSCUG00000003023 WAPL (ENSSCUG00000003022) #18 OPN4 (ENSSCUG00000003021) #19 LDB3 (ENSSCUG00000003019) #20 ENSSCUG00000003018 ##20 BMPR1A (ENSSCUG00000003017) #22 MMRN2 (ENSSCUG00000003016) #23 SNCG (ENSSCUG00000003015) #24 ENSSCUG00000003009 #26 SHLD2 (ENSSCUG00000003005) #27 ENSSCUG00000003003 #28 ENSSCUG00000003001 #29 NCOA4 (ENSSCUG00000002999) ENSSCUG00000002997 PARG (ENSSCUG00000002971) OGDHL (ENSSCUG00000002953) CHAT (ENSSCUG00000002950) RGR (ENSSCUG00000002946) #13 LRIT1 (ENSSCUG00000002944) #12 LRIT2 (ENSSCUG00000002942) #11 CDHR1 (ENSSCUG00000002939) #10 Australian saltwater crocodile MODERN SPECIES 68 FAM13C (ENSCPRG00005010704) ENSCPRG00005010696 ENSCPRG00005010694 BICC1 (ENSCPRG00005010676) ENSCPRG00005010656 CCSER2 (ENSCPRG00005010649) #14 ENSCPRG00005010630 GRID1 (ENSCPRG00005010624) #17 ENSCPRG00005010613 WAPL (ENSCPRG00005010588) #18 ENSCPRG00005010536 ##20 ENSCPRG00005010512 BMPR1A (ENSCPRG00005010505) #22 MMRN2 (ENSCPRG00005010499) #23 SNCG (ENSCPRG00005010457) #24 ENSCPRG00005010442 #26 SHLD2 (ENSCPRG00005010439) #27 ENSCPRG00005010417 #28 ENSCPRG00005010411 #29 ENSCPRG00005010406 NCOA4 (ENSCPRG00005010393) ENSCPRG00005010387 PARG (ENSCPRG00005010371) OGDHL (ENSCPRG00005010352) C10orf53 (ENSCPRG00005010350) CHAT (ENSCPRG00005010336) SLC18A3 (ENSCPRG00005010331) RGR (ENSCPRG00005010314) #13 Cryptodira ANCESTRAL SPECIES 6 ENSGT00390000013594 ENSGT00940000156416 ENSGT00950000183033.a.a.d.l ENSGT00950000183033.a.a.d.k ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00940000160064.a.a ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00390000013594 ENSGT00940000156416 ENSGT00950000183033.a.a.d.l ENSGT00950000183033.a.a.d.k ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00940000160064.a.a ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 Emydidae ANCESTRAL SPECIES 6 ENSGT00940000154939 ENSGT00390000013594 ENSGT00940000156416 ENSGT00950000183033.a.a.d.l ENSGT00950000183033.a.a.d.k ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00940000160064.a.a ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 painted turtle MODERN SPECIES 737 ENSCPBG00000007317 ENSCPBG00000007321 ENSCPBG00000007325 ENSCPBG00000007332 MBL2 (ENSCPBG00000007336) ENSCPBG00000007342 ENSCPBG00000007345 ENSCPBG00000007374 ENSCPBG00000007378 ENSCPBG00000007387 ENSCPBG00000007410 ENSCPBG00000007413 WAPL (ENSCPBG00000007425) #18 OPN4 (ENSCPBG00000007440) #19 LDB3 (ENSCPBG00000007467) ##20 BMPR1A (ENSCPBG00000007506) #22 MMRN2 (ENSCPBG00000007516) #23 SNCG (ENSCPBG00000007521) #24 ENSCPBG00000007530 #26 SHLD2 (ENSCPBG00000007540) #27 ENSCPBG00000007549 #28 ENSCPBG00000007557 #29 ENSCPBG00000007571 NCOA4 (ENSCPBG00000007614) ENSCPBG00000007631 PARG (ENSCPBG00000007647) OGDHL (ENSCPBG00000007662) C10orf53 (ENSCPBG00000007681) CHAT (ENSCPBG00000007694) SLC18A3 (ENSCPBG00000007705) RGR (ENSCPBG00000007711) #13 Three-toed box turtle MODERN SPECIES 69 BMPR1A (ENSTMTG00000004229) #22 MMRN2 (ENSTMTG00000004283) #23 SNCG (ENSTMTG00000004537) #24 ENSTMTG00000004589 #26 SHLD2 (ENSTMTG00000004625) #27 ENSTMTG00000004653 #28 ENSTMTG00000004676 #29 ENSTMTG00000004702 NCOA4 (ENSTMTG00000004763) ENSTMTG00000004799 PARG (ENSTMTG00000004841) OGDHL (ENSTMTG00000004926) C10orf53 (ENSTMTG00000005635) CHAT (ENSTMTG00000005649) SLC18A3 (ENSTMTG00000005688) RGR (ENSTMTG00000005697) #13 Testudinidae ANCESTRAL SPECIES 9 ENSGT00390000013594 ENSGT00940000156416 ENSGT00950000183033.a.a.d.l ENSGT00950000183033.a.a.d.k ENSGT00390000014563.a.b ENSGT00940000156276 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00530000064550.B ENSGT00940000160064.a.a ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.C #20 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000160819 #28 ENSGT00570000079168.b.a #29 ENSGT01030000234528.A.a.b ENSGT00390000008403 ENSGT00390000001094 ENSGT00390000003652.c ENSGT00950000183125.b.a.b ENSGT00390000002871 ENSGT01060000248556.A.b ENSGT00940000159449 ENSGT01090000260051.b.a.a.b.b #13 Goode s thornscrub tortoise MODERN SPECIES 21 ENSGEVG00005014449 CCDC6 (ENSGEVG00005015749) SLC16A9 (ENSGEVG00005015777) ENSGEVG00005015815 FAM13C (ENSGEVG00005015846) PHYHIPL (ENSGEVG00005016036) BICC1 (ENSGEVG00005016114) ENSGEVG00005016223 CCSER2 (ENSGEVG00005016287) #14 GRID1 (ENSGEVG00005016326) #17 ENSGEVG00005016405 ENSGEVG00005016435 WAPL (ENSGEVG00005016466) #18 OPN4 (ENSGEVG00005016499) #19 LDB3 (ENSGEVG00005016610) ##20 BMPR1A (ENSGEVG00005016812) #22 MMRN2 (ENSGEVG00005016898) #23 SNCG (ENSGEVG00005017061) #24 ENSGEVG00005017081 #26 SHLD2 (ENSGEVG00005017123) #27 ENSGEVG00005017151 #28 ENSGEVG00005017210 #29 ENSGEVG00005017234 NCOA4 (ENSGEVG00005017354) ENSGEVG00005017387 PARG (ENSGEVG00005017410) OGDHL (ENSGEVG00005017522) C10orf53 (ENSGEVG00005017963) CHAT (ENSGEVG00005017981) SLC18A3 (ENSGEVG00005018018) RGR (ENSGEVG00005018057) #13 Abingdon island giant tortoise MODERN SPECIES 747 BMPR1A (ENSCABG00000009416) #22 MMRN2 (ENSCABG00000009446) #23 SNCG (ENSCABG00000009448) #24 ENSCABG00000009457 #26 ENSCABG00000009459 #27 Chinese turtle MODERN SPECIES 217 WAPL (ENSPSIG00000009223) #18 OPN4 (ENSPSIG00000008873) #19 LDB3 (ENSPSIG00000008718) ##20 BMPR1A (ENSPSIG00000007367) #22 MMRN2 (ENSPSIG00000007342) #23 SNCG (ENSPSIG00000007189) #24 ENSPSIG00000006260 #26 SHLD2 (ENSPSIG00000006149) #27 ENSPSIG00000005616 #28 ENSPSIG00000005564 #29 ENSPSIG00000005556 NCOA4 (ENSPSIG00000005369) ENSPSIG00000005340 PARG (ENSPSIG00000004766) OGDHL (ENSPSIG00000004028) C10orf53 (ENSPSIG00000004025) CHAT (ENSPSIG00000003844) SLC18A3 (ENSPSIG00000000541) RGR (ENSPSIG00000003741) #13 Anura ANCESTRAL SPECIES 126 ENSGT00950000182815.a.a.a.b ENSGT00390000007221.a.b ENSGT00390000000046 ENSGT00940000160058.h ENSGT00510000048896 ENSGT00940000164026.o.b ENSGT00530000063169.a ENSGT00390000011412 ENSGT00940000165645 ENSGT00390000007586.a.a ENSGT00940000153912.A #14 ENSGT00940000155910 #17 ENSGT00390000015768 #18 ENSGT01100000263502.B.a.a #19 ENSGT00940000154877.A ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 Leishan spiny toad MODERN SPECIES 9 ENSLLEG00000017406 ENSLLEG00000017495 ENSLLEG00000017583 ENSLLEG00000017602 CCSER2 (ENSLLEG00000017659) #14 ENSLLEG00000017996 ENSLLEG00000018014 ENSLLEG00000018087 #17 ENSLLEG00000018355 ENSLLEG00000018382 #17 WAPL (ENSLLEG00000018468) #18 ENSLLEG00000019373 OPN4 (ENSLLEG00000019397) #19 LDB3 (ENSLLEG00000019559) ##20 ENSLLEG00000020682 BMPR1A (ENSLLEG00000020720) #22 MMRN2 (ENSLLEG00000021026) #23 SNCG (ENSLLEG00000021105) #24 ENSLLEG00000021156 ENSLLEG00000021178 ENSLLEG00000021229 ENSLLEG00000021254 ENSLLEG00000021301 ENSLLEG00000021389 ENSLLEG00000021426 ENSLLEG00000021478 ENSLLEG00000021505 ENSLLEG00000021546 ENSLLEG00000021565 ENSLLEG00000021594 ENSLLEG00000021655 Frog MODERN SPECIES 7 XB5893022 [provisional] (ENSXETG00000027560) TBATA (ENSXETG00000033778) mttp.2 (ENSXETG00000027557) ENSXETG00000003098 ENSXETG00000003099 ENSXETG00000044108 ccser2 (ENSXETG00000030589) #14 ENSXETG00000042525 grid1 (ENSXETG00000036937) #17 ENSXETG00000043016 ENSXETG00000040032 wapl (ENSXETG00000020555) #18 ENSXETG00000044455 opn4 (ENSXETG00000034251) #19 ldb3 (ENSXETG00000003653) ##20 bmpr1a (ENSXETG00000003655) #22 mmrn2 (ENSXETG00000030791) #23 sncg (ENSXETG00000003657) #24 ENSXETG00000046369 glud1 (ENSXETG00000034277) #26 syt15 (ENSXETG00000008157) #28 homeobox100496651-provisional (ENSXETG00000038582) bms1 (ENSXETG00000008158) ENSXETG00000048488 ENSXETG00000044003 ret (ENSXETG00000005422) csgalnact2 (ENSXETG00000000615) rasgef1a (ENSXETG00000000607) XB5952892 [provisional] (ENSXETG00000024763) sftpa2 (ENSXETG00000009325) ENSXETG00000034456 Coelacanth MODERN SPECIES 2366 BMPR1A (ENSLACG00000001839) #22 MMRN2 (ENSLACG00000003002) #23 SNCG (ENSLACG00000004743) #24 glud1a (ENSLACG00000006724) #26 ENSLACG00000022260 #27 Actinopterygii ANCESTRAL SPECIES 203 ENSGT00390000014293.b ENSGT00390000007683 ENSGT00940000166242 ENSGT00940000156999 ENSGT00940000156237 ENSGT00940000156481.a.a ENSGT00950000182924.A.b.a.a ENSGT00950000183054.b ENSGT00950000183027.a.b ENSGT00940000155571.B ENSGT01100000263502.B.a.a.d.a.b #19 ENSGT00940000154877.A ##20 ENSGT01100000263502.B.a.a.d.b #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000164992 ENSGT00940000155061.a.b Reedfish MODERN SPECIES 10 tmem254 (ENSECRG00000009671) bms1 (ENSECRG00000009689) tspan14 (ENSECRG00000009740) ENSECRG00000009800 chchd1 (ENSECRG00000009866) ENSECRG00000009898 ENSECRG00000009942 NDST2 (ENSECRG00000009963) camk2g1 (ENSECRG00000010257) sec24c (ENSECRG00000011103) SYNPO2L (ENSECRG00000011124) myoz1b (ENSECRG00000011128) USP54 (ENSECRG00000011133) opn4b (ENSECRG00000011140) #19 LDB3 (ENSECRG00000011153) ##20 bmpr1aa (ENSECRG00000011170) #22 ENSECRG00000011180 sncgb (ENSECRG00000011192) #24 glud1a (ENSECRG00000011203) #26 shld2 (ENSECRG00000011230) #27 nfkb2 (ENSECRG00000011255) ENSECRG00000011289 ENSECRG00000011321 elovl6l (ENSECRG00000011346) zgc:154058 (ENSECRG00000011362) ENSECRG00000011389 ENSECRG00000011407 unc5b (ENSECRG00000011591) SLC29A3 (ENSECRG00000012101) cdh23 (ENSECRG00000012283) C10orf105 (ENSECRG00000008468) Neopterygii ANCESTRAL SPECIES 33 ENSGT00570000079168.b.b.a ##29 ENSGT00940000160819 #28 ENSGT00390000014293.b ENSGT00390000007683 ENSGT00940000164412.a.a.b ENSGT00940000156999 ENSGT00940000156237 ENSGT00940000156481.a.a ENSGT00950000182924.A.b.a.a ENSGT00950000183054.b ENSGT00950000183027.a.b ENSGT00940000155571.B ENSGT01100000263502.B.a.a.d.a.b #19 ENSGT01100000263502.B.a.a.d.b #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000164992 ENSGT00940000155061.a.b ENSGT01050000244965.a.a ENSGT01030000234578.A.b.a.a.a Spotted gar MODERN SPECIES 671 twnk (ENSLOCG00000012623) LZTS2 (ENSLOCG00000012615) pdzd7a (ENSLOCG00000012602) sfxn3 (ENSLOCG00000012590) selenou1a (ENSLOCG00000012586) ENSLOCG00000012581 mat1a (ENSLOCG00000012578) ENSLOCG00000012561 sec24c (ENSLOCG00000012547) SYNPO2L (ENSLOCG00000012538) myoz1b (ENSLOCG00000012530) USP54 (ENSLOCG00000012516) ENSLOCG00000012513 opn4a (ENSLOCG00000012496) #19 ldb3a (ENSLOCG00000012484) ##20 bmpr1aa (ENSLOCG00000012466) #22 mmrn2a (ENSLOCG00000012455) #23 sncgb (ENSLOCG00000012448) #24 glud1a (ENSLOCG00000012436) #26 shld2 (ENSLOCG00000012430) #27 nfkb2 (ENSLOCG00000012413) PSD (ENSLOCG00000012400) zgc:92749 (ENSLOCG00000012395) AIFM2 (ENSLOCG00000012383) ENSLOCG00000018256 add3a (ENSLOCG00000012377) mxi1 (ENSLOCG00000012358) smndc1 (ENSLOCG00000012355) dusp5 (ENSLOCG00000012340) smc3 (ENSLOCG00000012326) RBM20 (ENSLOCG00000012315) Osteoglossocephalai ANCESTRAL SPECIES 31 ENSGT00570000079168.b.b.a ##29 ENSGT00940000160819 #28 ENSGT00390000014331 ENSGT00390000014293.b ENSGT00390000007683 ENSGT00940000164412.a.a.b ENSGT00940000156999 ENSGT00940000156237 ENSGT00940000156481.a.a.b ENSGT00950000182924.A.b.a.a ENSGT00950000183054.b.c ENSGT00950000183027.a.b.c.b ENSGT00940000155571.B ENSGT01100000263502.B.a.a.d.b #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A.c #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000164992 ENSGT00940000155061.a.b.k.a Clupeocephala ANCESTRAL SPECIES 89 ENSGT00950000183027.a.b.c.a ENSGT00940000155571.A ENSGT01100000263502.B.a.a.d.a.a #19 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A.c #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000164992 ENSGT00940000155061.a.b.k.a ENSGT01050000244965.a.b ENSGT00390000004582 ENSGT00660000095541.a.a ENSGT00390000013968 ENSGT00940000166409 ENSGT00950000183148.b.b ENSGT00390000018613.a ENSGT01100000263540.A.a ENSGT00940000160793 Otomorpha ANCESTRAL SPECIES 287 ENSGT00940000164412.a.a.b ENSGT00940000156999 ENSGT00940000156237 ENSGT00940000156481.a.a.b ENSGT00950000182924.A.b.a.a ENSGT00940000157656.b ENSGT00940000159769.a.a ENSGT00940000158973.a.a.n ENSGT00950000183054.b.d ENSGT00950000183027.a.b.c.a ENSGT00940000155571.A ENSGT01100000263502.B.a.a.d.a.a #19 ENSGT01100000263502.B.a.a.d.a.b #19 ENSGT00940000154877.C #20 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a.c #23 ENSGT00950000183175.A.c #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000164992 ENSGT00940000155061.a.b.k.a ENSGT00650000094737 Otophysi ANCESTRAL SPECIES 225 ENSGT01090000259987.b.b.a.a.a.b ENSGT00950000183054.b.c ENSGT00950000183027.a.b.c.b ENSGT00940000155571.B ENSGT01100000263502.B.a.a.d.a.b #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a.d #23 ENSGT00950000183175.A.d.b #24 ENSGT00390000000854.c.a ##26 ENSGT00940000155930.g.b ENSGT00940000154711.a.b ENSGT00940000158292.a.a ENSGT00940000160346.B.e ENSGT00940000160346.A ENSGT00940000156070.a.b ENSGT00940000161584 ENSGT00990000203619.A.b.b.b.a.e.l ENSGT01030000234573.B.c.b.a ENSGT00940000159658.b.a ENSGT00940000154815.b.a ENSGT00940000155970 Cyprinoidei ANCESTRAL SPECIES 18 ENSGT01060000253731 ENSGT00940000158336 ENSGT00940000159666.c ENSGT00940000166090 ENSGT00390000016682 ENSGT00940000161826.C ENSGT00940000156830.a ENSGT00940000164193 ENSGT00390000000111.a.n ENSGT01090000259987.b.b.a.a.a.b ENSGT00950000183054.b.c ENSGT00950000183027.a.b.c.b ENSGT00940000155571.B ENSGT01100000263502.B.a.a.d.a.b #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a.d #23 ENSGT00950000183175.A.d.b #24 ENSGT00390000000854.c.a.f ##26 ENSGT00940000155930.g.b ENSGT00940000154711.a.b ENSGT00940000158292.a.a ENSGT00940000160346.B.e ENSGT00940000156070.a.b ENSGT00990000203619.A.b.b.b.a.e.l ENSGT01030000234573.B.c.b.a ENSGT00940000159658.b.a ENSGT00940000154815.b.a ENSGT00940000155970 ENSGT00390000016617 ENSGT00950000183100.C.f Zebrafish DUPLICATION Zebrafish MODERN SPECIES 3 kctd2 (ENSDARG00000025875) SLC16A5 (ENSDARG00000030472) ENSDARG00000033446 ENSDARG00000079457 chad (ENSDARG00000045071) acsf2 (ENSDARG00000061201) armc7 (ENSDARG00000061197) ENSDARG00000096808 ndel1a (ENSDARG00000010953) itgb3b (ENSDARG00000045070) SYNPO2L (ENSDARG00000078696) myoz1b (ENSDARG00000071445) USP54 (ENSDARG00000077749) opn4b (ENSDARG00000053929) #19 ldb3b (ENSDARG00000099974) #20 bmpr1ab (ENSDARG00000105045) #22 ENSDARG00000073711 #23 sncgb (ENSDARG00000109715) #24 si:dkey-193p11.2 (ENSDARG00000096712) glud1b (ENSDARG00000101074) ##26 EPAS1 (ENSDARG00000008697) PRKCE (ENSDARG00000003008) six2b (ENSDARG00000054878) six3b (ENSDARG00000054879) ppm1bb (ENSDARG00000011496) zfp36l2 (ENSDARG00000021806) OXER1 (ENSDARG00000087084) mta3 (ENSDARG00000054903) KCNG3 (ENSDARG00000061622) cox7a2l (ENSDARG00000054907) rhoq (ENSDARG00000025953) Zebrafish MODERN SPECIES 4 mtg1 (ENSDARG00000069386) sprn (ENSDARG00000056004) ENSDARG00000104084 ##29 ENSDARG00000056080 chchd1 (ENSDARG00000029100) ENSDARG00000030967 zswim8 (ENSDARG00000069397) NDST2 (ENSDARG00000086269) ENSDARG00000076843 ENSDARG00000056206 ENSDARG00000077293 myoz1a (ENSDARG00000056209) usp54a (ENSDARG00000077948) opn4a (ENSDARG00000022098) #19 ldb3a (ENSDARG00000056322) ##20 bmpr1aa (ENSDARG00000019728) #22 mmrn2a (ENSDARG00000076135) #23 sncga (ENSDARG00000034423) #24 zgc:193505 (ENSDARG00000093584) glud1a (ENSDARG00000008816) #26 shld2 (ENSDARG00000038686) #27 nfkb2 (ENSDARG00000038687) PSD (ENSDARG00000078102) ENSDARG00000113096 ENSDARG00000078759 pbld (ENSDARG00000016704) pbld2 (ENSDARG00000026359) hnrnph3 (ENSDARG00000039466) rufy2 (ENSDARG00000062019) tspan15 (ENSDARG00000039455) tacr2 (ENSDARG00000074509) Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 88 ENSGT00390000014852.a.o ENSGT01060000253731 ENSGT00940000158336.cb ENSGT00940000159666.c.a ENSGT00940000166090.c ENSGT00390000016682.g ENSGT00940000156830.a.d ENSGT00940000161826.C.s ENSGT00390000000111.a.n.d ENSGT01090000259987.b.b.a.a.a.b.a ENSGT00950000183054.b.c.c ENSGT00950000183027.a.b.c.b.d ENSGT00940000155571.B.g ENSGT01100000263502.B.a.a.d.a.b.b #19 ENSGT00940000154877.C.ub.b #20 ENSGT00940000156225.k.a #22 ENSGT01030000234633.C.a.d.a #23 ENSGT00950000183175.A.d.b.a.a #24 ENSGT00390000000854.c.b.a #26 ENSGT00390000000854.c.a.f.a ##26 ENSGT00940000155930.g.b.a ENSGT00940000154711.a.b.b ENSGT00940000158292.a.a.a ENSGT00940000160346.B.e.a ENSGT00940000156070.a.b.b ENSGT00940000161584.l.b ENSGT00990000203619.A.b.b.b.a.e.l.d ENSGT01030000234573.B.c.b.a.b ENSGT00940000159658.b.a.b ENSGT00940000154815.b.a.c.a.b ENSGT00940000155970.bb Cyprininae_a ANCESTRAL SPECIES 8 ENSGT00390000014852.a.o ENSGT01060000253731 ENSGT00940000158336.cb ENSGT00940000159666.c.a ENSGT00940000166090.c ENSGT00390000016682.g ENSGT00940000156830.a.d ENSGT00940000161826.C.s ENSGT00390000000111.a.n.d ENSGT01090000259987.b.b.a.a.a.b.a ENSGT00950000183054.b.c.c ENSGT00950000183027.a.b.c.b.d ENSGT00940000155571.B.g ENSGT01100000263502.B.a.a.d.a.b.b #19 ENSGT00940000154877.C.ub.b #20 ENSGT00940000156225.k.a #22 ENSGT01030000234633.C.a.d.a #23 ENSGT00950000183175.A.d.b.a.b #24 ENSGT00390000000854.c.a.f.a ##26 ENSGT00940000155930.g.b.a ENSGT00940000154711.a.b.b ENSGT00940000158292.a.a.a ENSGT00940000160346.B.e.a ENSGT00940000156070.a.b.b ENSGT00940000161584.l.b ENSGT00990000203619.A.b.b.b.a.e.l.d ENSGT01030000234573.B.c.b.a.b ENSGT00940000159658.b.a.b ENSGT00940000154815.b.a.c.a.a ENSGT00940000155970.bb ENSGT00390000016617.t Common carp reference MODERN SPECIES 44 hexdc (ENSCCRG00000022345) ENSCCRG00000067766 kctd2 (ENSCCRG00000022343) ENSCCRG00000022342 ENSCCRG00000077651 ENSCCRG00000022334 acsf2 (ENSCCRG00000051198) chad (ENSCCRG00000051208) ndel1a (ENSCCRG00000022312) itgb3b (ENSCCRG00000022120) SYNPO2L (ENSCCRG00000071574) myoz1b (ENSCCRG00000022104) USP54 (ENSCCRG00000048001) opn4b (ENSCCRG00000007607) #19 ldb3b (ENSCCRG00000007619) #20 bmpr1ab (ENSCCRG00000079036) #22 ENSCCRG00000046163 #23 sncgb (ENSCCRG00000080007) #24 ENSCCRG00000046132 ##26 ENSCCRG00000015187 ENSCCRG00000046601 six2b (ENSCCRG00000044346) six3b (ENSCCRG00000060810) ppm1bb (ENSCCRG00000030208) zfp36l2 (ENSCCRG00000055269) OXER1 (ENSCCRG00000073858) mta3 (ENSCCRG00000010443) KCNG3 (ENSCCRG00000005654) cox7a2l (ENSCCRG00000077249) rhoq (ENSCCRG00000073831) pigf (ENSCCRG00000003343) Golden-line barbel MODERN SPECIES 46 znf438 (ENSSGRG00000040902) zeb1b (ENSSGRG00000040903) arhgap12b (ENSSGRG00000040907) hexdc (ENSSGRG00000041945) kctd2 (ENSSGRG00000041953) SLC16A5 (ENSSGRG00000041954) ENSSGRG00000041958 ENSSGRG00000041962 acsf2 (ENSSGRG00000041963) chad (ENSSGRG00000041964) ndel1a (ENSSGRG00000041969) SYNPO2L (ENSSGRG00000042072) myoz1b (ENSSGRG00000042073) USP54 (ENSSGRG00000042083) ldb3b (ENSSGRG00000042198) #20 bmpr1ab (ENSSGRG00000042201) #22 ENSSGRG00000042600 #23 ENSSGRG00000042602 glud1b (ENSSGRG00000042621) ##26 EPAS1 (ENSSGRG00000043140) PRKCE (ENSSGRG00000043155) six2b (ENSSGRG00000043249) six3b (ENSSGRG00000043250) ppm1bb (ENSSGRG00000043251) zfp36l2 (ENSSGRG00000043253) OXER1 (ENSSGRG00000043254) mta3 (ENSSGRG00000043259) cox7a2l (ENSSGRG00000043481) rhoq (ENSSGRG00000043483) pigf (ENSSGRG00000043487) cript (ENSSGRG00000043488) Goldfish MODERN SPECIES 30 zeb1b (ENSCARG00000051305) arhgap12b (ENSCARG00000050604) kctd2 (ENSCARG00000050524) SLC16A5 (ENSCARG00000050494) ABCB3c (ENSCARG00000049990) ENSCARG00000049916 chad (ENSCARG00000049900) acsf2 (ENSCARG00000049255) ndel1a (ENSCARG00000049090) itgb3b (ENSCARG00000048660) SYNPO2L (ENSCARG00000048568) myoz1b (ENSCARG00000048546) USP54 (ENSCARG00000048510) opn4b (ENSCARG00000048419) #19 ldb3b (ENSCARG00000048377) #20 bmpr1ab (ENSCARG00000047052) #22 sncgb (ENSCARG00000047014) #24 ENSCARG00000046838 ##26 EPAS1 (ENSCARG00000046819) PRKCE (ENSCARG00000045751) six2b (ENSCARG00000045714) six3b (ENSCARG00000045699) ppm1bb (ENSCARG00000045649) zfp36l2 (ENSCARG00000045621) OXER1 (ENSCARG00000045611) mta3 (ENSCARG00000040053) KCNG3 (ENSCARG00000039891) cox7a2l (ENSCARG00000039886) rhoq (ENSCARG00000039851) pigf (ENSCARG00000039840) cript (ENSCARG00000039816) Cyprininae ANCESTRAL SPECIES 64 ENSGT00390000014852.a.p ENSGT00940000158336.bb ENSGT00940000159666.c.b ENSGT00940000166090.d ENSGT00390000016682.h ENSGT00940000161826.C.t ENSGT00940000156830.a.c ENSGT00940000164193 ENSGT00390000000111.a.n.c ENSGT01090000259987.b.b.a.a.a.b.b ENSGT00950000183054.b.c.d ENSGT00950000183027.a.b.c.b.c ENSGT00940000155571.B.h ENSGT01100000263502.B.a.a.d.a.b.a #19 ENSGT00940000154877.C.ub.a #20 ENSGT00940000156225.k.b #22 ENSGT01030000234633.C.a.d.b #23 ENSGT00950000183175.A.d.b.a.b #24 ENSGT00390000000854.c.a.f.b ##26 ENSGT00940000155930.g.b.b ENSGT00940000154711.a.b.a ENSGT00940000158292.a.a.b ENSGT00940000160346.B.e.b ENSGT00940000156070.a.b.a ENSGT00940000161584.l.a ENSGT00990000203619.A.b.b.b.a.e.l.c ENSGT01030000234573.B.c.b.a.a ENSGT00940000159658.b.a.a ENSGT00940000154815.b.a.d ENSGT00940000154815.b.a.c.a.a ENSGT00940000155970.ab Cyprininae_a ANCESTRAL SPECIES 18 ENSGT00390000014852.a.p ENSGT00940000158336.bb ENSGT00940000159666.c.b ENSGT00940000166090.d ENSGT00390000016682.h ENSGT00940000161826.C.t ENSGT00940000156830.a.c ENSGT00940000164193 ENSGT00390000000111.a.n.c ENSGT01090000259987.b.b.a.a.a.b.b ENSGT00950000183054.b.c.d ENSGT00950000183027.a.b.c.b.c ENSGT00940000155571.B.h ENSGT01100000263502.B.a.a.d.a.b.a #19 ENSGT00940000154877.C.ub.a #20 ENSGT00940000156225.k.b #22 ENSGT01030000234633.C.a.d.b #23 ENSGT00950000183175.A.d.b.b #24 ENSGT00940000155930.g.b.b ENSGT00940000154711.a.b.a ENSGT00940000158292.a.a.b ENSGT00940000160346.B.e.b ENSGT00940000156070.a.b.a ENSGT00940000161584.l.a ENSGT00990000203619.A.b.b.b.a.e.l.c ENSGT01030000234573.B.c.b.a.a ENSGT00940000159658.b.a.a ENSGT00940000154815.b.a.d ENSGT00940000155970.ab ENSGT00390000016617.s ENSGT00950000183100.C.f Golden-line barbel MODERN SPECIES 385 bmpr1ab (ENSSGRG00000024283) #22 ENSSGRG00000024281 #23 sncgb (ENSSGRG00000024280) #24 ENSSGRG00000023467 ##26 EPAS1 (ENSSGRG00000023397) PRKCE (ENSSGRG00000023162) six2b (ENSSGRG00000023159) six3b (ENSSGRG00000023158) ppm1bb (ENSSGRG00000023155) zfp36l2 (ENSSGRG00000023154) OXER1 (ENSSGRG00000023152) mta3 (ENSSGRG00000022920) cox7a2l (ENSSGRG00000022914) rhoq (ENSSGRG00000022913) pigf (ENSSGRG00000022912) cript (ENSSGRG00000022908) Common carp reference MODERN SPECIES 25 znf438 (ENSCCRG00000026554) zeb1b (ENSCCRG00000056266) arhgap12b (ENSCCRG00000076841) hexdc (ENSCCRG00000001474) ENSCCRG00000051213 ENSCCRG00000079073 ENSCCRG00000051210 chad (ENSCCRG00000073446) acsf2 (ENSCCRG00000022316) itgb3b (ENSCCRG00000048051) SYNPO2L (ENSCCRG00000060038) myoz1b (ENSCCRG00000048017) USP54 (ENSCCRG00000025421) opn4b (ENSCCRG00000047457) #19 ldb3b (ENSCCRG00000047452) #20 bmpr1ab (ENSCCRG00000081366) #22 ENSCCRG00000046633 #23 sncgb (ENSCCRG00000046145) #24 ENSCCRG00000046628 #26 ENSCCRG00000046613 ENSCCRG00000015198 six2b (ENSCCRG00000011444) six3b (ENSCCRG00000032637) ppm1bb (ENSCCRG00000073667) zfp36l2 (ENSCCRG00000066647) OXER1 (ENSCCRG00000069397) mta3 (ENSCCRG00000064946) KCNG3 (ENSCCRG00000062429) cox7a2l (ENSCCRG00000056079) rhoq (ENSCCRG00000019701) pigf (ENSCCRG00000070582) Goldfish MODERN SPECIES 3 zeb1b (ENSCARG00000016251) arhgap12b (ENSCARG00000016298) hexdc (ENSCARG00000017121) kctd2 (ENSCARG00000017132) SLC16A5 (ENSCARG00000017150) acsf2 (ENSCARG00000017179) chad (ENSCARG00000017267) ENSCARG00000017277 armc7 (ENSCARG00000017282) ndel1a (ENSCARG00000017295) itgb3b (ENSCARG00000017332) SYNPO2L (ENSCARG00000017759) myoz1b (ENSCARG00000017768) USP54 (ENSCARG00000017787) ldb3b (ENSCARG00000017892) #20 bmpr1ab (ENSCARG00000018006) #22 ENSCARG00000019331 #23 sncgb (ENSCARG00000019338) #24 ENSCARG00000019352 ##26 EPAS1 (ENSCARG00000019497) PRKCE (ENSCARG00000019584) six2b (ENSCARG00000020042) Six3 (ENSCARG00000020052) ppm1bb (ENSCARG00000020062) zfp36l2 (ENSCARG00000020070) OXER1 (ENSCARG00000020074) mta3 (ENSCARG00000020173) KCNG3 (ENSCARG00000023177) cox7a2l (ENSCARG00000023182) ATRNL1 (ENSCARG00000023283) trub1 (ENSCARG00000024199) Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 126 ENSGT00500000044923.b ENSGT00730000112146 ENSGT00570000079168.b.b.a.c.a ##29 ENSGT00390000014293.b.a ENSGT00390000007683.a ENSGT00940000164412.a.a.b.o.a ENSGT00940000156999.c ENSGT00940000156237.k.a ENSGT00940000157656.b.m ENSGT00940000156481.a.a.b.d.b.a ENSGT00950000183054.b.d.b ENSGT00950000183027.a.b.c.a.d ENSGT00940000155571.A.b ENSGT01100000263502.B.a.a.d.a.a.a #19 ENSGT00940000154877.B.bb.a.a ##20 ENSGT00940000156225.l.a #22 ENSGT01030000234633.C.a.c.a #23 ENSGT00950000183175.A.c.b #24 ENSGT00940000181884.b.a.a ENSGT00390000000854.c.b.b.a #26 ENSGT00390000003133 #27 ENSGT00940000164992.j ENSGT00940000155061.a.b.k.a.r.a ENSGT00780000122010.b ENSGT00390000017595.y.a ENSGT00940000157720.w.b ENSGT00940000155595.b ENSGT00940000157973.a ENSGT00940000155512.g.b ENSGT00950000182787.A.a.f ENSGT00950000182787.B Goldfish MODERN SPECIES 4 ENSCARG00000002232 zswim8 (ENSCARG00000002525) NDST2 (ENSCARG00000005474) ENSCARG00000006207 ENSCARG00000006492 ENSCARG00000011034 myoz1a (ENSCARG00000011041) usp54a (ENSCARG00000011066) opn4a (ENSCARG00000011107) #19 ldb3a (ENSCARG00000011131) ##20 glud1a (ENSCARG00000011255) #26 zgc:193505 (ENSCARG00000011516) sncga (ENSCARG00000011522) #24 ENSCARG00000011528 opn4a (ENSCARG00000011534) #19 bmpr1aa (ENSCARG00000011551) #22 mmrn2a (ENSCARG00000011578) #23 sncga (ENSCARG00000011583) #24 zgc:193505 (ENSCARG00000011593) glud1a (ENSCARG00000011605) #26 nfkb2 (ENSCARG00000011786) PSD (ENSCARG00000012023) pbld2 (ENSCARG00000012538) HNRNPH3 (ENSCARG00000012568) rufy2 (ENSCARG00000012595) tspan15 (ENSCARG00000012873) tacr2 (ENSCARG00000012878) hk1 (ENSCARG00000012997) hkdc1 (ENSCARG00000017374) supv3l1 (ENSCARG00000017396) vps26a (ENSCARG00000017477) Cyprininae_a ANCESTRAL SPECIES 32 ENSGT00730000112146 ENSGT00570000079168.b.b.a.c.a ##29 ENSGT00390000014293.b.a ENSGT00390000007683.a ENSGT00940000164412.a.a.b.o.a ENSGT00940000156999.c ENSGT00940000156237.k.a ENSGT00940000157656.b.m ENSGT00940000156481.a.a.b.d.b.a ENSGT00950000183054.b.d.b ENSGT00950000183027.a.b.c.a.d ENSGT00940000155571.A.b ENSGT01100000263502.B.a.a.d.a.a.a #19 ENSGT00940000154877.B.bb.a.a ##20 ENSGT00940000154877.B.bb.b ##20 ENSGT00940000156225.l.a #22 ENSGT01030000234633.C.a.c.a #23 ENSGT00950000183175.A.c.b #24 ENSGT00940000181884.b.a.a ENSGT00940000181884.a ENSGT00390000000854.c.b.b.a #26 ENSGT00390000003133 #27 ENSGT00940000164992.j ENSGT00940000155061.a.b.k.a.r.a ENSGT00940000167706 ENSGT00780000122010.b ENSGT00390000017595.y.a ENSGT00940000157720.w.b ENSGT00940000155595.b ENSGT00940000157973.a ENSGT00940000155512.g.b Common carp reference MODERN SPECIES 18 elovl6l (ENSCCRG00000074063) ENSCCRG00000055029 ENSCCRG00000061667 ##29 ENSCCRG00000032147 chchd1 (ENSCCRG00000053347) ENSCCRG00000029136 zswim8 (ENSCCRG00000014628) ENSCCRG00000046362 ENSCCRG00000062156 ENSCCRG00000070266 ENSCCRG00000008768 myoz1a (ENSCCRG00000033976) usp54a (ENSCCRG00000077256) opn4a (ENSCCRG00000004613) #19 ldb3a (ENSCCRG00000052934) ##20 bmpr1aa (ENSCCRG00000016071) #22 mmrn2a (ENSCCRG00000016210) #23 sncga (ENSCCRG00000068745) #24 zgc:193505 (ENSCCRG00000053666) ENSCCRG00000060403 #26 nfkb2 (ENSCCRG00000006553) ENSCCRG00000057933 ENSCCRG00000056474 ENSCCRG00000064576 pbld2 (ENSCCRG00000072935) ENSCCRG00000010254 rufy2 (ENSCCRG00000010265) tspan15 (ENSCCRG00000010382) tacr2 (ENSCCRG00000030681) hk1 (ENSCCRG00000043411) hkdc1 (ENSCCRG00000030894) Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 853 ldb3a (ENSSGRG00000022527) ##20 bmpr1aa (ENSSGRG00000022687) #22 mmrn2a (ENSSGRG00000023318) #23 sncga (ENSSGRG00000023319) #24 zgc:193505 (ENSSGRG00000023321) glud1a (ENSSGRG00000023333) #26 shld2 (ENSSGRG00000023924) #27 nfkb2 (ENSSGRG00000023931) ENSSGRG00000024093 ENSSGRG00000024343 DNA2 (ENSSGRG00000024344) pbld2 (ENSSGRG00000024345) HNRNPH3 (ENSSGRG00000024346) ENSSGRG00000024349 HNRNPH3 (ENSSGRG00000024350) rufy2 (ENSSGRG00000024352) ENSSGRG00000024382 Golden-line barbel MODERN SPECIES 312 ENSSGRG00000043639 SYNPO2L (ENSSGRG00000049826) myoz1a (ENSSGRG00000049827) ENSSGRG00000049831 usp54a (ENSSGRG00000049832) opn4a (ENSSGRG00000049834) #19 ldb3a (ENSSGRG00000049844) ##20 bmpr1aa (ENSSGRG00000049956) #22 sncga (ENSSGRG00000049965) #24 zgc:193505 (ENSSGRG00000049966) glud1a (ENSSGRG00000049981) #26 shld2 (ENSSGRG00000050344) #27 shld2 (ENSSGRG00000050346) #27 nfkb2 (ENSSGRG00000050352) ENSSGRG00000050606 ENSSGRG00000050607 DNA2 (ENSSGRG00000050610) pbld (ENSSGRG00000050617) HNRNPH3 (ENSSGRG00000050721) rufy2 (ENSSGRG00000050730) tspan15 (ENSSGRG00000050995) tacr2 (ENSSGRG00000050996) hk1 (ENSSGRG00000051007) Cyprininae ANCESTRAL SPECIES 62 ENSGT00500000044923.a ENSGT01030000236132.b ENSGT00570000079168.b.b.a.c.b ##29 ENSGT00390000014293.b.b ENSGT00390000007683.b ENSGT00940000164412.a.a.b.o.b ENSGT00940000156999.d ENSGT00940000156237.k.b ENSGT00940000157656.b.n ENSGT00940000156481.a.a.b.d.b.b ENSGT00950000183054.b.d.a ENSGT00950000183027.a.b.c.a.c ENSGT00940000155571.A.a ENSGT01100000263502.B.a.a.d.a.a.b #19 ENSGT00940000154877.B.ab ##20 ENSGT00940000156225.l.b #22 ENSGT01030000234633.C.a.c.b #23 ENSGT00950000183175.A.c.a #24 ENSGT00940000181884.b.b ENSGT00390000000854.c.b.b.b #26 ENSGT00940000164992.i ENSGT00940000155061.a.b.k.a.r.b ENSGT00940000167706 ENSGT00780000122010.a ENSGT00390000017595.z ENSGT00390000017595.y.b ENSGT00940000157720.w.a ENSGT00940000155595.a ENSGT00940000157973.b ENSGT00940000155512.g.a ENSGT00950000182787.A.a.e Cyprininae_a ANCESTRAL SPECIES 148 ENSGT00500000044923.a ENSGT01030000236132.b ENSGT00570000079168.b.b.a.c.b ##29 ENSGT00390000014293.b.b ENSGT00390000007683.b ENSGT00940000164412.a.a.b.o.b ENSGT00940000156999.d ENSGT00940000156237.k.b ENSGT00940000157656.b.n ENSGT00940000156481.a.a.b.d.b.b ENSGT00950000183054.b.d.a ENSGT00950000183027.a.b.c.a.c ENSGT00940000155571.A.a ENSGT01100000263502.B.a.a.d.a.a.b #19 ENSGT00940000154877.B.ab ##20 ENSGT00940000156225.l.b #22 ENSGT01030000234633.C.a.c.b #23 ENSGT00950000183175.A.c.a #24 ENSGT00940000181884.b.b ENSGT00390000000854.c.b.b.b #26 ENSGT00940000164992.i ENSGT00940000155061.a.b.k.a.r.b ENSGT00780000122010.a ENSGT00390000017595.z ENSGT00390000017595.y.b ENSGT00940000157720.w.a ENSGT00940000155595.a ENSGT00940000157973.b ENSGT00940000155512.g.a ENSGT00950000182787.A.a.e ENSGT00950000182787.E.d.e.a Common carp reference MODERN SPECIES 48 elovl6l (ENSCCRG00000029185) mtg1 (ENSCCRG00000029152) ENSCCRG00000070292 ENSCCRG00000029146 ##29 ENSCCRG00000029130 chchd1 (ENSCCRG00000072015) ENSCCRG00000029112 zswim8 (ENSCCRG00000031614) ENSCCRG00000032482 ENSCCRG00000033195 ENSCCRG00000073949 ENSCCRG00000072488 usp54a (ENSCCRG00000023111) opn4a (ENSCCRG00000049258) #19 ldb3a (ENSCCRG00000004387) ##20 bmpr1aa (ENSCCRG00000009681) #22 mmrn2a (ENSCCRG00000022380) #23 sncga (ENSCCRG00000072385) #24 glud1a (ENSCCRG00000022422) #26 zgc:193505 (ENSCCRG00000022385) nfkb2 (ENSCCRG00000010500) ENSCCRG00000008068 ENSCCRG00000012997 ENSCCRG00000079933 pbld (ENSCCRG00000071007) pbld2 (ENSCCRG00000042249) ENSCCRG00000042254 rufy2 (ENSCCRG00000042270) tspan15 (ENSCCRG00000043365) tacr2 (ENSCCRG00000072790) ENSCCRG00000029925 Goldfish MODERN SPECIES 31 mxtx1 (ENSCARG00000006272) elovl6l (ENSCARG00000006283) mtg1 (ENSCARG00000006301) ENSCARG00000006381 ENSCARG00000006384 ##29 ENSCARG00000006401 chchd1 (ENSCARG00000006440) ENSCARG00000006447 zswim8 (ENSCARG00000006648) NDST2 (ENSCARG00000008935) ENSCARG00000009152 SYNPO2L (ENSCARG00000013646) myoz1a (ENSCARG00000013648) opn4a (ENSCARG00000013660) #19 ldb3a (ENSCARG00000013706) ##20 bmpr1aa (ENSCARG00000014084) #22 mmrn2a (ENSCARG00000014412) #23 sncga (ENSCARG00000014423) #24 zgc:193505 (ENSCARG00000014444) glud1a (ENSCARG00000014456) #26 nfkb2 (ENSCARG00000014566) ENSCARG00000015574 ENSCARG00000015812 DNA2 (ENSCARG00000015836) pbld2 (ENSCARG00000016661) HNRNPH3 (ENSCARG00000016772) rufy2 (ENSCARG00000016830) ENSCARG00000017401 zswim8 (ENSCARG00000017430) ENSCARG00000017866 MYOM2 (ENSCARG00000017945) Characiphysae ANCESTRAL SPECIES 93 ENSGT00940000158256.g ENSGT00940000159930.fb.a ENSGT00940000163380 ENSGT00940000154883.e.a ENSGT00390000009925.b ENSGT00940000163471.b ENSGT00940000165932 ENSGT00390000012745 ENSGT00390000000111.a.n ENSGT01090000259987.b.b.a.a.a.b ENSGT00950000183054.b.c ENSGT00950000183027.a.b.c.b ENSGT00940000155571.B ENSGT01100000263502.B.a.a.d.a.b #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a.d #23 ENSGT00950000183175.A.d.b #24 ENSGT00390000000854.c.a ##26 ENSGT00940000155930.g.b ENSGT00940000154711.a.b ENSGT00940000158292.a.a ENSGT00940000160346.B.e ENSGT00940000160346.A ENSGT00940000156070.a.b ENSGT00990000203619.A.b.b.b.a.e.l ENSGT01030000234573.B.c.b.a ENSGT00940000159658.b.a ENSGT00940000154815.b.a ENSGT00940000155970 ENSGT00390000016617 Channel catfish DUPLICATION Channel catfish MODERN SPECIES 4 ENSIPUG00000006912 cep131 (ENSIPUG00000006931) ENSIPUG00000006987 ENSIPUG00000007069 nploc4 (ENSIPUG00000007080) pde6gb (ENSIPUG00000007125) OXLD1 (ENSIPUG00000007156) gprc5c (ENSIPUG00000007163) itln3 (ENSIPUG00000007174) GPR142 (ENSIPUG00000007209) myoz1b (ENSIPUG00000007219) ENSIPUG00000007287 ENSIPUG00000007307 opn4b (ENSIPUG00000007323) #19 ldb3b (ENSIPUG00000007388) #20 BMPR1A (ENSIPUG00000007443) #22 ENSIPUG00000007530 #23 sncgb (ENSIPUG00000007561) #24 glud1 (ENSIPUG00000007692) ##26 EPAS1 (ENSIPUG00000007806) ENSIPUG00000007870 Prkce (ENSIPUG00000007876) ENSIPUG00000007935 Six2 (ENSIPUG00000007963) ppm1bb (ENSIPUG00000007982) zfp36l2 (ENSIPUG00000008010) OXER1 (ENSIPUG00000008015) mta3 (ENSIPUG00000008039) KCNG3 (ENSIPUG00000008184) cox7a2l (ENSIPUG00000008189) RHOQ (ENSIPUG00000008216) Channel catfish MODERN SPECIES 22 ENSIPUG00000017778 chchd1 (ENSIPUG00000017757) ENSIPUG00000017746 zswim8 (ENSIPUG00000017683) ndst2 (ENSIPUG00000017545) ENSIPUG00000017527 ENSIPUG00000017511 camk2g (ENSIPUG00000016927) synpo2l (ENSIPUG00000016868) MYOZ1 (ENSIPUG00000016850) usp54 (ENSIPUG00000016764) opn4a (ENSIPUG00000016705) #19 ENSIPUG00000016693 ENSIPUG00000016684 ldb3 (ENSIPUG00000016414) ##20 bmpr1a (ENSIPUG00000016269) #22 mmrn2 (ENSIPUG00000016233) #23 sncg (ENSIPUG00000016223) #24 ENSIPUG00000016213 glud1 (ENSIPUG00000016158) #26 shld2 (ENSIPUG00000016145) #27 ENSIPUG00000016128 #27 nfkb2 (ENSIPUG00000016084) PSD (ENSIPUG00000016051) ENSIPUG00000016038 hnrnph3 (ENSIPUG00000016015) rufy2 (ENSIPUG00000015983) TSPAN15 (ENSIPUG00000015936) tacr2 (ENSIPUG00000015896) hk1 (ENSIPUG00000015851) hkdc1 (ENSIPUG00000015800) Characiphysae_b ANCESTRAL SPECIES 3 ENSGT00940000158256.g ENSGT00940000159930.fb.a ENSGT00940000163380 ENSGT00940000154883.e.a ENSGT00390000009925.b ENSGT00940000163471.b ENSGT00940000165932 ENSGT00390000012745 ENSGT00390000000111.a.n ENSGT01090000259987.b.b.a.a.a.b ENSGT00950000183054.b.c ENSGT00950000183027.a.b.c.b ENSGT00940000155571.B ENSGT01100000263502.B.a.a.d.a.b #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a.d #23 ENSGT00950000183175.A.d.b #24 ENSGT00390000000854.c.a ##26 ENSGT00940000155930.g.b ENSGT00940000154711.a.b ENSGT00940000158292.a.a ENSGT00940000160346.B.e ENSGT00940000160346.A ENSGT00940000156070.a.b ENSGT00990000203619.A.b.b.b.a.e.l ENSGT01030000234573.B.c.b.a ENSGT00940000159658.b.a ENSGT00940000154815.b.a ENSGT00940000155970 ENSGT00390000016617 Electric eel DUPLICATION Electric eel MODERN SPECIES 62 st6galnac1.1 (ENSEEEG00000019932) srsf2a (ENSEEEG00000019929) RNF157 (ENSEEEG00000019924) lrrc59 (ENSEEEG00000019923) nat9 (ENSEEEG00000019922) ndel1a (ENSEEEG00000019921) itgb3b (ENSEEEG00000017617) SYNPO2L (ENSEEEG00000017490) myoz1b (ENSEEEG00000017488) ENSEEEG00000017486 opn4b (ENSEEEG00000017483) #19 ldb3b (ENSEEEG00000017481) #20 bmpr1ab (ENSEEEG00000017239) #22 ENSEEEG00000017228 #23 sncgb (ENSEEEG00000017222) #24 glud1b (ENSEEEG00000017058) ##26 EPAS1 (ENSEEEG00000017053) PRKCE (ENSEEEG00000017048) six2b (ENSEEEG00000017047) six3b (ENSEEEG00000017045) ppm1bb (ENSEEEG00000017043) zfp36l2 (ENSEEEG00000017042) mta3 (ENSEEEG00000016994) KCNG3 (ENSEEEG00000016988) cox7a2l (ENSEEEG00000016987) rhoq (ENSEEEG00000016986) pigf (ENSEEEG00000016985) cript (ENSEEEG00000016984) Electric eel MODERN SPECIES 43 CAMK2G (ENSEEEG00000005832) SYNPO2L (ENSEEEG00000005831) myoz1a (ENSEEEG00000005830) ENSEEEG00000005829 ldb3a (ENSEEEG00000005827) ##20 bmpr1aa (ENSEEEG00000005795) #22 mmrn2a (ENSEEEG00000005790) #23 sncga (ENSEEEG00000005788) #24 glud1a (ENSEEEG00000005085) #26 shld2 (ENSEEEG00000005060) #27 nfkb2 (ENSEEEG00000004970) ENSEEEG00000004940 ENSEEEG00000004934 HNRNPH3 (ENSEEEG00000004918) rufy2 (ENSEEEG00000004862) tspan15 (ENSEEEG00000004848) tacr2 (ENSEEEG00000004846) ENSEEEG00000004399 supv3l1 (ENSEEEG00000004374) vps26a (ENSEEEG00000004333) kifbp (ENSEEEG00000004328) Characoidei ANCESTRAL SPECIES 6 ENSGT00940000158256.g ENSGT00940000159930.fb.a ENSGT00940000163380 ENSGT00940000154883.e.a ENSGT00390000009925.b ENSGT00940000163471.b ENSGT00940000165932 ENSGT00390000012745 ENSGT00390000000111.a.n ENSGT01090000259987.b.b.a.a.a.b ENSGT00950000183054.b.c ENSGT00950000183027.a.b.c.b ENSGT00940000155571.B ENSGT01100000263502.B.a.a.d.a.b #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a.d #23 ENSGT00950000183175.A.d.b #24 ENSGT00390000000854.c.a ##26 ENSGT00940000155930.g.b ENSGT00940000154711.a.b ENSGT00940000158292.a.a ENSGT00940000160346.A ENSGT00940000156070.a.b ENSGT00990000203619.A.b.b.b.a.e.l ENSGT01030000234573.B.c.b.a ENSGT00940000159658.b.a ENSGT00940000154815.b.a ENSGT00940000155970 ENSGT00390000016617 ENSGT00950000183100.C.f Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 3 CASKIN2 (ENSPNAG00000010599) st6galnac1.1 (ENSPNAG00000010514) ENSPNAG00000010487 srsf2a (ENSPNAG00000010477) RNF157 (ENSPNAG00000010452) ENSPNAG00000010346 lrrc59 (ENSPNAG00000010333) nat9 (ENSPNAG00000010306) ndel1a (ENSPNAG00000010276) itgb3b (ENSPNAG00000010208) SYNPO2L (ENSPNAG00000010152) myoz1b (ENSPNAG00000010132) USP54 (ENSPNAG00000010117) opn4b (ENSPNAG00000001364) #19 ldb3b (ENSPNAG00000010062) #20 bmpr1ab (ENSPNAG00000010017) #22 ENSPNAG00000009978 #23 sncgb (ENSPNAG00000004705) #24 glud1b (ENSPNAG00000001350) ##26 EPAS1 (ENSPNAG00000009861) PRKCE (ENSPNAG00000009835) six2b (ENSPNAG00000009779) ENSPNAG00000009766 ppm1bb (ENSPNAG00000009742) zfp36l2 (ENSPNAG00000009692) OXER1 (ENSPNAG00000009683) mta3 (ENSPNAG00000009661) KCNG3 (ENSPNAG00000009567) cox7a2l (ENSPNAG00000009558) rhoq (ENSPNAG00000009548) pigf (ENSPNAG00000009529) Red-bellied piranha MODERN SPECIES 261 sprn (ENSPNAG00000000740) ENSPNAG00000008169 ##29 ENSPNAG00000000728 chchd1 (ENSPNAG00000008144) ENSPNAG00000000696 zswim8 (ENSPNAG00000000658) NDST2 (ENSPNAG00000000611) ENSPNAG00000008016 CAMK2G (ENSPNAG00000007999) SYNPO2L (ENSPNAG00000007945) myoz1a (ENSPNAG00000007935) usp54a (ENSPNAG00000007917) opn4a (ENSPNAG00000007878) #19 ENSPNAG00000007861 #20 ENSPNAG00000000513 ##20 bmpr1aa (ENSPNAG00000000503) #22 mmrn2a (ENSPNAG00000007825) #23 sncga (ENSPNAG00000000489) #24 glud1a (ENSPNAG00000007811) #26 ENSPNAG00000007802 HNRNPH3 (ENSPNAG00000000466) rufy2 (ENSPNAG00000007790) Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 21 ENSAMXG00000042327 ENSAMXG00000033750 ENSAMXG00000036487 CHRM3 (ENSAMXG00000039331) FMN2 (ENSAMXG00000001131) grem2b (ENSAMXG00000026021) lrrc59 (ENSAMXG00000032220) nat9 (ENSAMXG00000001206) ndel1a (ENSAMXG00000030193) itgb3b (ENSAMXG00000001361) SYNPO2L (ENSAMXG00000032916) myoz1b (ENSAMXG00000041324) ENSAMXG00000031297 opn4b (ENSAMXG00000001604) #19 ldb3b (ENSAMXG00000001649) #20 bmpr1ab (ENSAMXG00000002312) #22 ENSAMXG00000002305 #23 sncgb (ENSAMXG00000031674) #24 glud1b (ENSAMXG00000002290) ##26 EPAS1 (ENSAMXG00000000017) PRKCE (ENSAMXG00000000041) six2b (ENSAMXG00000037944) ENSAMXG00000000070 ppm1bb (ENSAMXG00000000072) zfp36l2 (ENSAMXG00000040114) ENSAMXG00000035448 OXER1 (ENSAMXG00000025124) mta3 (ENSAMXG00000016007) KCNG3 (ENSAMXG00000043786) cox7a2l (ENSAMXG00000030489) ENSAMXG00000039574 Mexicana tetra MODERN SPECIES 17 sprn (ENSAMXG00000025312) ENSAMXG00000025313 ##29 ENSAMXG00000021094 chchd1 (ENSAMXG00000034541) ENSAMXG00000021110 zswim8 (ENSAMXG00000021135) NDST2 (ENSAMXG00000021178) ENSAMXG00000021188 CAMK2G (ENSAMXG00000021201) SYNPO2L (ENSAMXG00000040904) myoz1a (ENSAMXG00000035339) usp54a (ENSAMXG00000021221) opn4a (ENSAMXG00000033537) #19 ENSAMXG00000038221 #20 ldb3a (ENSAMXG00000036200) ##20 bmpr1aa (ENSAMXG00000037653) #22 mmrn2a (ENSAMXG00000021258) #23 sncga (ENSAMXG00000042919) #24 glud1a (ENSAMXG00000021266) #26 shld2 (ENSAMXG00000021286) #27 nfkb2 (ENSAMXG00000021294) ENSAMXG00000021303 HNRNPH3 (ENSAMXG00000021323) rufy2 (ENSAMXG00000021356) ENSAMXG00000034368 ENSAMXG00000013039 ENSAMXG00000040500 tspan15 (ENSAMXG00000012878) tacr2 (ENSAMXG00000012832) hk1 (ENSAMXG00000012670) hkdc1 (ENSAMXG00000009684) Clupeiformes ANCESTRAL SPECIES 94 ENSGT00530000063586.a ENSGT00390000005639.a.b.d.a ENSGT00950000183100.B ENSGT00570000079168.b.b.a.c ##29 ENSGT00390000014293.b ENSGT00390000007683 ENSGT00940000164412.a.a.b ENSGT00940000156999 ENSGT00940000156237 ENSGT00940000157656.b ENSGT00940000156481.a.a.a.a ENSGT00950000183054.b.d ENSGT00950000183027.a.b.c.a ENSGT01100000263502.B.a.a.d.b.d #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a.c #23 ENSGT00950000183175.A.c #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000164992 ENSGT00940000155061.a.b.k.a ENSGT01050000244965.a.b ENSGT00390000004582 ENSGT00660000095541.a.a ENSGT00390000013968 ENSGT00940000166409 ENSGT00950000183148.b.b ENSGT00390000018613.a ENSGT01100000263540.A.a ENSGT00940000160793 Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 7 nrcama (ENSCHAG00000025303) cntn1b (ENSCHAG00000024773) pdzrn4 (ENSCHAG00000024743) gxylt1b (ENSCHAG00000024738) yaf2 (ENSCHAG00000024722) zcrb1 (ENSCHAG00000024705) ENSCHAG00000024699 twf1b (ENSCHAG00000024685) pus7l (ENSCHAG00000024665) ENSCHAG00000024650 prickle1b (ENSCHAG00000024638) ENSCHAG00000024329 ENSCHAG00000024313 samd8 (ENSCHAG00000024278) ENSCHAG00000024268 bmpr1ab (ENSCHAG00000023695) #22 ENSCHAG00000023665 #24 glud1b (ENSCHAG00000023618) ##26 ENSCHAG00000023576 PRKCE (ENSCHAG00000023351) ITLN1 (ENSCHAG00000023334) six3b (ENSCHAG00000023331) ppm1bb (ENSCHAG00000023318) KCNG3 (ENSCHAG00000023310) mta3 (ENSCHAG00000023005) dusp12 (ENSCHAG00000022961) ldb3b (ENSCHAG00000022954) #20 OPN4 (ENSCHAG00000022846) #19 ENSCHAG00000022828 myoz1b (ENSCHAG00000022813) SYNPO2L (ENSCHAG00000022808) Atlantic herring MODERN SPECIES 4 ENSCHAG00000011690 chchd1 (ENSCHAG00000011676) ENSCHAG00000011630 zswim8 (ENSCHAG00000005956) NDST2 (ENSCHAG00000002649) ENSCHAG00000002309 ENSCHAG00000001687 SYNPO2L (ENSCHAG00000001621) myoz1a (ENSCHAG00000001598) ENSCHAG00000001533 ENSCHAG00000001521 opn4a (ENSCHAG00000001033) #19 ENSCHAG00000000776 #20 ldb3a (ENSCHAG00000000580) ##20 ENSCHAG00000000395 bmpr1aa (ENSCHAG00000022527) #22 mmrn2a (ENSCHAG00000022502) #23 sncga (ENSCHAG00000022482) #24 ENSCHAG00000022475 glud1a (ENSCHAG00000022369) #26 ENSCHAG00000022351 #27 nfkb2 (ENSCHAG00000021945) ENSCHAG00000021311 ENSCHAG00000021284 elovl6l (ENSCHAG00000021278) AIFM2 (ENSCHAG00000021270) ninl (ENSCHAG00000021235) gins1 (ENSCHAG00000021172) abhd12 (ENSCHAG00000021061) pygb (ENSCHAG00000019750) ENSCHAG00000019690 Denticle herring DUPLICATION Denticle herring MODERN SPECIES 6 rhoq (ENSDCDG00000021232) ENSDCDG00000021236 myoz1b (ENSDCDG00000021238) ENSDCDG00000021241 ENSDCDG00000021244 myoz1b (ENSDCDG00000021246) SYNPO2L (ENSDCDG00000021247) rhoq (ENSDCDG00000021248) pigf (ENSDCDG00000021250) cript (ENSDCDG00000021252) gch2 (ENSDCDG00000021253) socs5a (ENSDCDG00000021257) CCR8 (ENSDCDG00000021316) OPN4 (ENSDCDG00000021327) #19 ldb3b (ENSDCDG00000021348) #20 BMPR1A (ENSDCDG00000021374) #22 SNCG (ENSDCDG00000022668) #24 glud1b (ENSDCDG00000022676) ##26 ppm1bb (ENSDCDG00000022702) ENSDCDG00000022707 six2b (ENSDCDG00000022710) PRKCE (ENSDCDG00000022722) ENSDCDG00000022903 btbd11a (ENSDCDG00000022910) cry1a (ENSDCDG00000023919) tnnt2c (ENSDCDG00000024879) si:dkey-222f8.3 (ENSDCDG00000024882) cyb5r3 (ENSDCDG00000024886) ENSDCDG00000024927 syt10 (ENSDCDG00000025399) ints13 (ENSDCDG00000025410) Denticle herring MODERN SPECIES 18 ldb1a (ENSDCDG00000022402) polr1c (ENSDCDG00000022367) ENSDCDG00000022362 ##29 ENSDCDG00000022354 chchd1 (ENSDCDG00000022352) ENSDCDG00000022340 zswim8 (ENSDCDG00000016506) NDST2 (ENSDCDG00000013747) ENSDCDG00000013708 ENSDCDG00000013702 ENSDCDG00000012794 SYNPO2L (ENSDCDG00000012727) myoz1a (ENSDCDG00000012719) opn4a (ENSDCDG00000012673) #19 ldb3a (ENSDCDG00000012564) ##20 bmpr1aa (ENSDCDG00000012414) #22 mmrn2a (ENSDCDG00000012358) #23 sncga (ENSDCDG00000012344) #24 glud1a (ENSDCDG00000012064) #26 ENSDCDG00000012032 #27 ENSDCDG00000012024 #27 nfkb2 (ENSDCDG00000011755) PSD (ENSDCDG00000007401) elovl6l (ENSDCDG00000006956) AIFM2 (ENSDCDG00000006892) ninl (ENSDCDG00000006825) gins1 (ENSDCDG00000006578) abhd12 (ENSDCDG00000005432) ENSDCDG00000005423 ENSDCDG00000005418 ENSDCDG00000005416 Euteleosteomorpha ANCESTRAL SPECIES 33 ENSGT00950000183027.a.b.c.a ENSGT00940000155571.A ENSGT01100000263502.B.a.a.d.a.a #19 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A.c #24 ENSGT00940000170913 ENSGT00950000183175.A.d.a.b #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000164992 ENSGT00940000155061.a.b.k.a ENSGT00650000094737 ENSGT01050000244965.a.b ENSGT00390000004582 ENSGT00660000095541.a.a ENSGT00390000013968 ENSGT00940000166409 ENSGT00950000183148.b.b Protacanthopterygii ANCESTRAL SPECIES 39 ENSGT00940000154877.B.a.b ##20 ENSGT00940000156225 #22 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A.d.a.b #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000164992 ENSGT00940000155061.a.b.k.a ENSGT01050000244965.a.b ENSGT00390000004582 ENSGT00660000095541.a.a ENSGT00390000013968 ENSGT00940000166409 ENSGT00950000183148.b.b ENSGT00390000018613.a ENSGT01100000263540.A.a ENSGT00940000160793 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 61 ENSGT00940000155571.A.g.a ENSGT01100000263502.B.a.a.d.a.a.c #19 ENSGT00940000154877.C.kb #20 ENSGT00940000154877.B.a.b ##20 ENSGT00940000156225.y #22 ENSGT01030000234633.C.a.a #23 ENSGT00950000183175.A.d.a.b.a #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000164992.l ENSGT00940000155061.a.b.k.a.n ENSGT01050000244965.a.b.h ENSGT00390000004582 ENSGT00660000095541.a.a.k ENSGT00390000013968 ENSGT00940000166409 ENSGT00950000183148.b.b ENSGT00390000018613.a ENSGT01100000263540.A.a.f ENSGT00940000160793.a Salmoninae_a ANCESTRAL SPECIES 11 ENSGT00390000005029.g ENSGT00940000159518.a.d ENSGT00940000164095.a ENSGT00940000164611.a.b.a ENSGT00940000158698.b.a ENSGT00390000009155.d ENSGT00810000125473.A.c ENSGT00940000155078.a.b.a.b.g.a.b ENSGT00950000183054.b.d.j ENSGT00950000183027.a.b.c.a.b ENSGT00940000155571.A.g.a ENSGT00940000163377.a.b.b.b ENSGT01100000263502.B.a.a.d.a.a.c #19 ENSGT00940000154877.C.kb #20 ENSGT00940000154877.B.a.b ##20 ENSGT00940000156225.y #22 ENSGT01030000234633.C.a.a #23 ENSGT00950000183175.A.d.a.b.a #24 ENSGT00390000000854.c.b.e.a #26 ENSGT00390000003133 #27 ENSGT00940000164992.l ENSGT00940000155061.a.b.k.a.n ENSGT01050000244965.a.b.h ENSGT00390000004582 ENSGT00660000095541.a.a.k ENSGT00390000013968 ENSGT00940000166409 ENSGT00950000183148.b.b ENSGT00390000018613.a ENSGT01100000263540.A.a.f ENSGT00940000160793.a Salmo ANCESTRAL SPECIES 29 ENSGT00390000005029.g ENSGT00940000159518.a.d ENSGT00940000164095.a ENSGT00940000164611.a.b.a ENSGT00940000158698.b.a ENSGT00390000009155.d ENSGT00810000125473.A.c ENSGT00940000155078.a.b.a.b.g.a.b ENSGT00950000183054.b.d.j ENSGT00950000183027.a.b.c.a.b ENSGT00940000155571.A.g.a ENSGT00940000163377.a.b.b.b ENSGT01100000263502.B.a.a.d.a.a.c #19 ENSGT00940000154877.C.kb #20 ENSGT00940000154877.B.a.b ##20 ENSGT00940000156225.y #22 ENSGT01030000234633.C.a.a #23 ENSGT00950000183175.A.d.a.b.a #24 ENSGT00390000000854.c.b.e.a #26 ENSGT00390000003133 #27 ENSGT00940000164992.l ENSGT00940000155061.a.b.k.a.n ENSGT01050000244965.a.b.h ENSGT00390000004582 ENSGT00660000095541.a.a.k ENSGT00390000013968 ENSGT00940000166409 ENSGT00950000183148.b.b ENSGT00390000018613.a ENSGT01100000263540.A.a.f ENSGT00940000160793.a Atlantic salmon MODERN SPECIES 9 cyp17a1 (ENSSSAG00000069890) fbxw4 (ENSSSAG00000069868) fgf8a (ENSSSAG00000098674) slc2a15a (ENSSSAG00000069641) ENSSSAG00000069628 ENSSSAG00000069622 ENSSSAG00000069615 ENSSSAG00000069562 ENSSSAG00000069556 ENSSSAG00000069555 myoz1a (ENSSSAG00000069550) usp54a (ENSSSAG00000069536) ENSSSAG00000069529 opn4a (ENSSSAG00000069504) #19 ldb3a (ENSSSAG00000069409) ##20 bmpr1aa (ENSSSAG00000069050) #22 mmrn2 (ENSSSAG00000069040) #23 SNCG (ENSSSAG00000111421) #24 glud1 (ENSSSAG00000068962) #26 nfkb2 (ENSSSAG00000068892) ENSSSAG00000067538 ENSSSAG00000110597 ENSSSAG00000067501 ninl (ENSSSAG00000067460) gins1 (ENSSSAG00000067441) abhd12 (ENSSSAG00000067416) pygb (ENSSSAG00000067185) ENSSSAG00000118099 entpd6 (ENSSSAG00000066870) vsx1 (ENSSSAG00000067122) ACS2L (ENSSSAG00000066956) River trout MODERN SPECIES 35 fbxw4 (ENSSTUG00000007530) fgf8a (ENSSTUG00000007553) slc2a15a (ENSSTUG00000007570) ENSSTUG00000007746 tlx1 (ENSSTUG00000007752) ENSSTUG00000007767 cep68 (ENSSTUG00000007773) ENSSTUG00000007786 ENSSTUG00000007860 SYNPO2L (ENSSTUG00000007875) myoz1a (ENSSTUG00000007881) usp54a (ENSSTUG00000007892) opn4a (ENSSTUG00000007915) #19 ENSSTUG00000008072 #20 ldb3a (ENSSTUG00000008096) ##20 bmpr1aa (ENSSTUG00000008113) #22 mmrn2a (ENSSTUG00000008241) #23 SNCG (ENSSTUG00000008244) #24 glud1a (ENSSTUG00000008266) #26 shld2 (ENSSTUG00000008515) #27 ENSSTUG00000008521 #27 nfkb2 (ENSSTUG00000008553) ENSSTUG00000008701 elovl6l (ENSSTUG00000008882) AIFM2 (ENSSTUG00000008903) ninl (ENSSTUG00000008953) gins1 (ENSSTUG00000009022) abhd12 (ENSSTUG00000009109) pygb (ENSSTUG00000009517) ENSSTUG00000009617 entpd6 (ENSSTUG00000009629) Oncorhynchus ANCESTRAL SPECIES 2 ENSGT00940000155588.b ENSGT00390000005029.g ENSGT00940000159518.a.d ENSGT00940000164095.a ENSGT00940000164611.a.b.a ENSGT00940000158698.b.a ENSGT00390000009155.d ENSGT00810000125473.A.c ENSGT00940000155078.a.b.a.b.g.a.b ENSGT00950000183054.b.d.j ENSGT00950000183027.a.b.c.a.b ENSGT00940000155571.A.g.a ENSGT00940000163377.a.b.b.b ENSGT01100000263502.B.a.a.d.a.a.c #19 ENSGT00940000154877.B.a.b ##20 ENSGT00940000156225.y #22 ENSGT01030000234633.C.a.a #23 ENSGT00950000183175.A.d.a.b.a #24 ENSGT00390000000854.c.b.e.a #26 ENSGT00940000164992.l ENSGT00940000155061.a.b.k.a.n ENSGT00390000004582 ENSGT00660000095541.a.a.k ENSGT00390000013968 ENSGT00940000166409 ENSGT00950000183148.b.b ENSGT00390000018613.a ENSGT01100000263540.A.a.f ENSGT00940000160793.a ENSGT00940000158550 ENSGT00440000039984.a.e Oncorhynchus_a ANCESTRAL SPECIES 1 ENSGT00940000155588.b ENSGT00390000005029.g ENSGT00940000159518.a.d ENSGT00940000164095.a ENSGT00940000164611.a.b.a ENSGT00940000158698.b.a ENSGT00390000009155.d ENSGT00810000125473.A.c ENSGT00940000155078.a.b.a.b.g.a.b ENSGT00950000183054.b.d.j ENSGT00950000183027.a.b.c.a.b ENSGT00940000155571.A.g.a ENSGT00940000163377.a.b.b.b ENSGT01100000263502.B.a.a.d.a.a.c #19 ENSGT00940000154877.B.a.b ##20 ENSGT00940000156225.y #22 ENSGT01030000234633.C.a.a #23 ENSGT00950000183175.A.d.a.b.a #24 ENSGT00390000000854.c.b.e.a #26 ENSGT00940000164992.l ENSGT00940000155061.a.b.k.a.n ENSGT00390000004582 ENSGT00660000095541.a.a.k ENSGT00390000013968 ENSGT00940000166409 ENSGT00950000183148.b.b ENSGT00390000018613.a ENSGT01100000263540.A.a.f ENSGT00940000160793.a ENSGT00940000158550 ENSGT00440000039984.a.e Chinook salmon MODERN SPECIES 30 cyp17a1 (ENSOTSG00005035756) fbxw4 (ENSOTSG00005035754) fgf8a (ENSOTSG00005035753) slc2a15a (ENSOTSG00005035584) ENSOTSG00005035582 tlx1 (ENSOTSG00005035580) ENSOTSG00005035578 cep68 (ENSOTSG00005035576) ENSOTSG00005035345 SYNPO2L (ENSOTSG00005035343) myoz1a (ENSOTSG00005035341) usp54a (ENSOTSG00005035271) ENSOTSG00005035203 opn4a (ENSOTSG00005035201) #19 ldb3a (ENSOTSG00005035085) ##20 bmpr1aa (ENSOTSG00005034641) #22 mmrn2a (ENSOTSG00005034639) #23 SNCG (ENSOTSG00005034638) #24 glud1a (ENSOTSG00005034596) #26 nfkb2 (ENSOTSG00005034235) ENSOTSG00005032517 AIFM2 (ENSOTSG00005032504) ninl (ENSOTSG00005032502) gins1 (ENSOTSG00005032493) abhd12 (ENSOTSG00005032395) pygb (ENSOTSG00005031972) ENSOTSG00005031961 entpd6 (ENSOTSG00005031959) vsx1 (ENSOTSG00005031958) acss1 (ENSOTSG00005031722) apmap (ENSOTSG00005031698) Coho salmon MODERN SPECIES 24 cyp17a1 (ENSOKIG00005008708) fbxw4 (ENSOKIG00005008688) fgf8a (ENSOKIG00005008657) slc2a15a (ENSOKIG00005007891) ENSOKIG00005007829 tlx1 (ENSOKIG00005007814) ENSOKIG00005007807 cep68 (ENSOKIG00005007798) ENSOKIG00005007623 SYNPO2L (ENSOKIG00005007597) myoz1a (ENSOKIG00005007586) usp54a (ENSOKIG00005007541) ENSOKIG00005007463 opn4a (ENSOKIG00005007429) #19 ldb3a (ENSOKIG00005007339) ##20 bmpr1aa (ENSOKIG00005007168) #22 mmrn2a (ENSOKIG00005007137) #23 SNCG (ENSOKIG00005007088) #24 glud1a (ENSOKIG00005007006) #26 nfkb2 (ENSOKIG00005006743) ENSOKIG00005005951 AIFM2 (ENSOKIG00005005856) ninl (ENSOKIG00005005819) gins1 (ENSOKIG00005005778) abhd12 (ENSOKIG00005004764) ENSOKIG00005004695 ENSOKIG00005004691 pygb (ENSOKIG00005004087) vsx1 (ENSOKIG00005003996) ENSOKIG00005003992 acss1 (ENSOKIG00005003938) Rainbow trout MODERN SPECIES cyp17a1 (ENSOMYG00000004006) fbxw4 (ENSOMYG00000003974) fgf8a (ENSOMYG00000060026) slc2a15a (ENSOMYG00000003788) ENSOMYG00000003660 tlx1 (ENSOMYG00000003624) ENSOMYG00000003606 ENSOMYG00000003583 ENSOMYG00000003446 ENSOMYG00000003305 myoz1a (ENSOMYG00000003276) ENSOMYG00000051133 usp54a (ENSOMYG00000003214) opn4a (ENSOMYG00000003022) #19 ldb3a (ENSOMYG00000002905) ##20 bmpr1aa (ENSOMYG00000002792) #22 mmrn2a (ENSOMYG00000002687) #23 SNCG (ENSOMYG00000002650) #24 glud1 (ENSOMYG00000002516) #26 nfkb2 (ENSOMYG00000002188) ENSOMYG00000001816 ENSOMYG00000068417 aifm2 (ENSOMYG00000001396) NINL (ENSOMYG00000001342) gins1 (ENSOMYG00000001219) abhd12 (ENSOMYG00000001040) pygb (ENSOMYG00000000808) ENSOMYG00000000353 entpd6 (ENSOMYG00000000332) vsx1 (ENSOMYG00000000318) ACSS1 (ENSOMYG00000000284) Huchen MODERN SPECIES 84 ENSHHUG00000032596 opn4a (ENSHHUG00000032613) #19 ENSHHUG00000032624 ENSHHUG00000032627 #20 ldb3a (ENSHHUG00000032636) ##20 bmpr1aa (ENSHHUG00000032651) #22 mmrn2a (ENSHHUG00000032683) #23 sncgb (ENSHHUG00000032689) #24 glud1a (ENSHHUG00000032696) #26 shld2 (ENSHHUG00000032994) #27 nfkb2 (ENSHHUG00000033003) ENSHHUG00000033068 ENSHHUG00000033158 AIFM2 (ENSHHUG00000033161) ENSHHUG00000033188 ninl (ENSHHUG00000033194) gins1 (ENSHHUG00000033211) abhd12 (ENSHHUG00000033222) pygb (ENSHHUG00000033286) ENSHHUG00000034720 entpd6 (ENSHHUG00000034722) Salmoninae ANCESTRAL SPECIES 82 ENSGT00740000115593.d ENSGT00940000166025.b.a ENSGT00940000158034.r ENSGT00390000005029.h ENSGT00940000159518.a.c ENSGT00940000164611.a.b.b ENSGT00940000158698.b.b ENSGT00390000009155.c ENSGT00810000125473.A.d ENSGT00940000155078.a.b.a.b.g.b ENSGT00950000183054.b.d.i ENSGT00950000183027.a.b.c.a.a ENSGT00940000155571.A.g.b ENSGT01100000263502.B.a.a.d.a.a.d #19 ENSGT00940000154877.B.a.a ##20 ENSGT00940000156225.z #22 ENSGT01030000234633.C.a.b #23 ENSGT00950000183175.A.d.a.b.b #24 ENSGT00940000164992.k ENSGT00940000155061.a.b.k.a.m ENSGT01050000244965.a.b.g ENSGT00660000095541.a.a.l ENSGT01000000220547 ENSGT01100000263540.A.a.e ENSGT00940000160793.b ENSGT01100000263520.a.a.a.a.b.b.b ENSGT00440000039984.a.f ENSGT00940000160277.d ENSGT00950000183147.B.e.a ENSGT00940000153954.vb ENSGT00940000172797 Salmoninae_a ANCESTRAL SPECIES 16 ENSGT00740000115593.d ENSGT00940000166025.b.a ENSGT00940000158034.r ENSGT00390000005029.h ENSGT00940000159518.a.c ENSGT00940000164611.a.b.b ENSGT00940000158698.b.b ENSGT00390000009155.c ENSGT00810000125473.A.d ENSGT00940000155078.a.b.a.b.g.b ENSGT00950000183054.b.d.i ENSGT00950000183027.a.b.c.a.a ENSGT00940000155571.A.g.b ENSGT01100000263502.B.a.a.d.a.a.d #19 ENSGT00940000154877.B.a.a ##20 ENSGT00940000156225.z #22 ENSGT01030000234633.C.a.b #23 ENSGT00950000183175.A.d.a.b.b #24 ENSGT00390000000854.c.b.e.b #26 ENSGT00940000164992.k ENSGT00940000155061.a.b.k.a.m ENSGT01050000244965.a.b.g ENSGT00660000095541.a.a.l ENSGT01100000263540.A.a.e ENSGT00940000160793.b ENSGT01100000263520.a.a.a.a.b.b.b ENSGT00440000039984.a.f ENSGT00940000160277.d ENSGT00950000183147.B.e.a ENSGT00940000153954.vb ENSGT00940000168290.a Salmo ANCESTRAL SPECIES 23 ENSGT00740000115593.d ENSGT00940000166025.b.a ENSGT00940000158034.r ENSGT00390000005029.h ENSGT00940000159518.a.c ENSGT00940000164611.a.b.b ENSGT00940000158698.b.b ENSGT00390000009155.c ENSGT00810000125473.A.d ENSGT00940000155078.a.b.a.b.g.b ENSGT00950000183054.b.d.i ENSGT00950000183027.a.b.c.a.a ENSGT00940000155571.A.g.b ENSGT01100000263502.B.a.a.d.a.a.d #19 ENSGT00940000154877.B.a.a ##20 ENSGT00940000156225.z #22 ENSGT01030000234633.C.a.b #23 ENSGT00950000183175.A.d.a.b.b #24 ENSGT00390000000854.c.b.e.b #26 ENSGT00940000164992.k ENSGT00940000155061.a.b.k.a.m ENSGT01050000244965.a.b.g ENSGT00660000095541.a.a.l ENSGT01100000263540.A.a.e ENSGT00940000160793.b ENSGT01100000263520.a.a.a.a.b.b.b ENSGT00440000039984.a.f ENSGT00940000160277.d ENSGT00950000183147.B.e.a ENSGT00940000153954.vb ENSGT00940000168290.a River trout MODERN SPECIES 9 hells (ENSSTUG00000032377) ENSSTUG00000032338 pcgf6 (ENSSTUG00000032319) fbxw4 (ENSSTUG00000032200) fgf8a (ENSSTUG00000032164) ENSSTUG00000032153 tlx1 (ENSSTUG00000032131) ENSSTUG00000032122 cep68 (ENSSTUG00000032111) ENSSTUG00000031891 zgc:153169 (ENSSTUG00000031867) SYNPO2L (ENSSTUG00000031861) myoz1a (ENSSTUG00000031839) opn4a (ENSSTUG00000031800) #19 ldb3a (ENSSTUG00000031482) ##20 bmpr1aa (ENSSTUG00000030770) #22 mmrn2a (ENSSTUG00000030752) #23 SNCG (ENSSTUG00000030733) #24 glud1a (ENSSTUG00000030436) #26 nfkb2 (ENSSTUG00000030346) ENSSTUG00000028784 elovl6l (ENSSTUG00000028713) ninl (ENSSTUG00000028594) ENSSTUG00000028578 entpd6 (ENSSTUG00000028521) vsx1 (ENSSTUG00000028490) ENSSTUG00000028481 apmap (ENSSTUG00000028444) CST7 (ENSSTUG00000028429) SYNDIG1 (ENSSTUG00000028413) ENSSTUG00000025613 Atlantic salmon MODERN SPECIES ENSSSAG00000108556 fbxw4 (ENSSSAG00000068356) fgf8a (ENSSSAG00000068350) ENSSSAG00000094428 tlx1 (ENSSSAG00000068344) ENSSSAG00000109421 ENSSSAG00000068334 RAB1A (ENSSSAG00000090451) ENSSSAG00000068314 ENSSSAG00000112156 myoz1a (ENSSSAG00000068303) ENSSSAG00000103442 usp54a (ENSSSAG00000067930) opn4a (ENSSSAG00000067894) #19 ldb3a (ENSSSAG00000067860) ##20 bmpr1aa (ENSSSAG00000066270) #22 mmrn2a (ENSSSAG00000066228) #23 SNCG (ENSSSAG00000066209) #24 glud1a (ENSSSAG00000066078) #26 nfkb2 (ENSSSAG00000065078) ENSSSAG00000062853 ENSSSAG00000099034 ENSSSAG00000118169 ENSSSAG00000062699 enp6 (ENSSSAG00000062635) VSX1 (ENSSSAG00000062565) ENSSSAG00000062552 apmap (ENSSSAG00000062463) ENSSSAG00000062430 ENSSSAG00000059225 ENSSSAG00000059158 Oncorhynchus ANCESTRAL SPECIES 17 ENSGT00940000166025.b.a ENSGT00940000158034.r ENSGT00390000005029.h ENSGT00940000159518.a.c ENSGT00940000164611.a.b.b ENSGT00940000158698.b.b ENSGT00390000009155.c ENSGT00810000125473.A.d ENSGT00940000155078.a.b.a.b.g.b ENSGT00950000183045.C.mb.b ENSGT00950000183054.b.d.i ENSGT00950000183027.a.b.c.a.a ENSGT00940000155571.A.g.b ENSGT01100000263502.B.a.a.d.a.a.d #19 ENSGT00940000154877.B.a.a ##20 ENSGT00940000156225.z #22 ENSGT01030000234633.C.a.b #23 ENSGT00950000183175.A.d.a.b.b #24 ENSGT00390000000854.c.b.e.b #26 ENSGT00940000164992.k ENSGT00940000155061.a.b.k.a.m ENSGT01050000244965.a.b.g ENSGT00660000095541.a.a.l ENSGT01000000220547 ENSGT01100000263540.A.a.e ENSGT00940000160793.b ENSGT01100000263520.a.a.a.a.b.b.b ENSGT00440000039984.a.f ENSGT00940000160277.d ENSGT00950000183147.B.e.a ENSGT00940000153954.vb Oncorhynchus_a ANCESTRAL SPECIES 13 ENSGT00940000166025.b.a ENSGT00940000158034.r ENSGT00390000005029.h ENSGT00940000159518.a.c ENSGT00940000164611.a.b.b ENSGT00940000158698.b.b ENSGT00390000009155.c ENSGT00810000125473.A.d ENSGT00940000155078.a.b.a.b.g.b ENSGT00950000183045.C.mb.b ENSGT00950000183054.b.d.i ENSGT00950000183027.a.b.c.a.a ENSGT00940000155571.A.g.b ENSGT01100000263502.B.a.a.d.a.a.d #19 ENSGT00940000154877.B.a.a ##20 ENSGT00940000156225.z #22 ENSGT01030000234633.C.a.b #23 ENSGT00950000183175.A.d.a.b.b #24 ENSGT00390000000854.c.b.e.b #26 ENSGT00940000164992.k ENSGT00940000155061.a.b.k.a.m ENSGT01050000244965.a.b.g ENSGT00660000095541.a.a.l ENSGT01100000263540.A.a.e ENSGT00940000160793.b ENSGT01100000263520.a.a.a.a.b.b.b ENSGT00440000039984.a.f ENSGT00940000160277.d ENSGT00950000183147.B.e.a ENSGT00940000153954.vb ENSGT00940000168290.a Chinook salmon MODERN SPECIES ENSOTSG00005008658 pcgf6 (ENSOTSG00005008656) fbxw4 (ENSOTSG00005008650) fgf8a (ENSOTSG00005008649) ENSOTSG00005008648 tlx1 (ENSOTSG00005008647) ENSOTSG00005008646 cep68 (ENSOTSG00005008645) ENSOTSG00005008641 zgc:153169 (ENSOTSG00005008639) SYNPO2L (ENSOTSG00005008637) myoz1a (ENSOTSG00005008636) usp54a (ENSOTSG00005008635) opn4a (ENSOTSG00005008620) #19 ldb3a (ENSOTSG00005008616) ##20 bmpr1aa (ENSOTSG00005006028) #22 mmrn2a (ENSOTSG00005006005) #23 sncgb (ENSOTSG00005006003) #24 glud1a (ENSOTSG00005005296) #26 PSD (ENSOTSG00005001611) elovl6l (ENSOTSG00005001594) ninl (ENSOTSG00005001552) ENSOTSG00005001541 entpd6 (ENSOTSG00005001534) vsx1 (ENSOTSG00005001527) ENSOTSG00005001525 apmap (ENSOTSG00005001520) CST7 (ENSOTSG00005001518) SYNDIG1 (ENSOTSG00005001516) ENSOTSG00005000433 ENSOTSG00005000388 Coho salmon MODERN SPECIES 2 hells (ENSOKIG00005047721) ENSOKIG00005047965 ENSOKIG00005047981 fbxw4 (ENSOKIG00005047999) fgf8a (ENSOKIG00005048027) ENSOKIG00005048035 ENSOKIG00005048037 tlx1 (ENSOKIG00005048040) ENSOKIG00005048043 ENSOKIG00005048047 zgc:153169 (ENSOKIG00005048056) SYNPO2L (ENSOKIG00005048087) myoz1a (ENSOKIG00005048094) opn4a (ENSOKIG00005048102) #19 ldb3a (ENSOKIG00005048125) ##20 bmpr1aa (ENSOKIG00005048228) #22 mmrn2a (ENSOKIG00005048348) #23 SNCG (ENSOKIG00005048349) #24 glud1a (ENSOKIG00005048374) #26 nfkb2 (ENSOKIG00005048514) ENSOKIG00005048658 ENSOKIG00005049102 elovl6l (ENSOKIG00005049104) ENSOKIG00005049111 entpd6 (ENSOKIG00005049122) vsx1 (ENSOKIG00005049133) ENSOKIG00005049138 APMAP (ENSOKIG00005049139) CST7 (ENSOKIG00005049146) SYNDIG1 (ENSOKIG00005049150) ENSOKIG00005049278 Rainbow trout MODERN SPECIES 15 fbxw4 (ENSOMYG00000042367) fgf8a (ENSOMYG00000042351) ENSOMYG00000042342 tlx1 (ENSOMYG00000042338) ENSOMYG00000042337 ENSOMYG00000042335 ENSOMYG00000042216 ENSOMYG00000042180 ENSOMYG00000042176 ENSOMYG00000069512 myoz1a (ENSOMYG00000042165) usp54a (ENSOMYG00000042157) opn4a (ENSOMYG00000042134) #19 ENSOMYG00000059037 ldb3a (ENSOMYG00000042037) ##20 bmpr1aa (ENSOMYG00000041006) #22 mmrn2a (ENSOMYG00000040901) #23 SNCG (ENSOMYG00000040891) #24 ENSOMYG00000040602 ENSOMYG00000039983 ENSOMYG00000039873 ENSOMYG00000040710 #26 ENSOMYG00000039842 ENSOMYG00000050633 ENSOMYG00000039824 ENTPD6 (ENSOMYG00000039742) VSX1 (ENSOMYG00000039674) ENSOMYG00000039660 APMAP (ENSOMYG00000039623) CST7 (ENSOMYG00000039577) SYNDIG1 (ENSOMYG00000039560) Huchen MODERN SPECIES 122 ENSHHUG00000033805 fgf8a (ENSHHUG00000033818) ENSHHUG00000033846 tlx1 (ENSHHUG00000033847) ENSHHUG00000033850 cep68 (ENSHHUG00000033851) ENSHHUG00000033859 zgc:153169 (ENSHHUG00000034231) SYNPO2L (ENSHHUG00000034243) myoz1a (ENSHHUG00000034248) ENSHHUG00000034253 ENSHHUG00000034254 ENSHHUG00000034256 opn4a (ENSHHUG00000034263) #19 ldb3a (ENSHHUG00000034284) ##20 bmpr1aa (ENSHHUG00000034314) #22 mmrn2a (ENSHHUG00000034393) #23 ENSHHUG00000034399 ENSHHUG00000034404 #24 ENSHHUG00000034429 #26 nfkb2 (ENSHHUG00000034665) PSD (ENSHHUG00000034682) elovl6l (ENSHHUG00000034710) ninl (ENSHHUG00000034714) ENSHHUG00000034726 entpd6 (ENSHHUG00000034730) vsx1 (ENSHHUG00000034739) ENSHHUG00000034749 apmap (ENSHHUG00000034770) CST7 (ENSHHUG00000034852) SYNDIG1 (ENSHHUG00000034857) Northern pike MODERN SPECIES 5 ENSELUG00000033745 valopa (ENSELUG00000000799) nkx6.2 (ENSELUG00000018652) INPP5A (ENSELUG00000018638) csad (ENSELUG00000018621) PWWP2B (ENSELUG00000018627) LRRC27 (ENSELUG00000018588) STK32C (ENSELUG00000018549) ENSELUG00000000793 tmem254 (ENSELUG00000018474) mxtx1 (ENSELUG00000018433) rhoq (ENSELUG00000018425) ENSELUG00000018363 opn4a (ENSELUG00000018351) #19 ldb3a (ENSELUG00000018300) ##20 bmpr1aa (ENSELUG00000000746) #22 mmrn2a (ENSELUG00000018134) #23 ENSELUG00000018113 #24 ENSELUG00000026691 glud1a (ENSELUG00000018070) #26 nfkb2 (ENSELUG00000001190) ENSELUG00000017891 elovl6l (ENSELUG00000017862) AIFM2 (ENSELUG00000017848) ninl (ENSELUG00000017789) gins1 (ENSELUG00000017723) abhd12 (ENSELUG00000017692) pygb (ENSELUG00000017645) ENSELUG00000000687 entpd6 (ENSELUG00000017602) vsx1 (ENSELUG00000017514) Acanthomorphata ANCESTRAL SPECIES 93 ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000170913 ENSGT01030000234633.C.a #23 ENSGT00950000183175.A.c #24 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00940000164992 ENSGT00940000155061.a.b.k.a ENSGT00650000094737 ENSGT00940000157037.b.b.b ENSGT00940000154372.b ENSGT00940000155648.B.b ENSGT00940000157750 ENSGT00940000155896.k ENSGT00940000153956.a.b ENSGT00940000155989.e Cod MODERN SPECIES 6 ENSGMOG00000025648 ENSGMOG00000012218 ENSGMOG00000012761 EGR2 (ENSGMOG00000037016) ENSGMOG00000030754 ENSGMOG00000034312 ENSGMOG00000013286 ENSGMOG00000035634 ENSGMOG00000012768 ENSGMOG00000026820 ENSGMOG00000011896 ENSGMOG00000018180 ENSGMOG00000018191 ENSGMOG00000016813 #19 ENSGMOG00000018212 ##20 bmpr1aa (ENSGMOG00000002440) #22 ENSGMOG00000025647 ENSGMOG00000001660 ENSGMOG00000026553 ENSGMOG00000008049 ENSGMOG00000037153 ENSGMOG00000022629 ENSGMOG00000034113 ENSGMOG00000009598 ENSGMOG00000029923 ENSGMOG00000028209 ENSGMOG00000014811 ENSGMOG00000005151 ENSGMOG00000024561 ENSGMOG00000018575 ENSGMOG00000036705 Euacanthomorphacea ANCESTRAL SPECIES 60 ENSGT00940000160277 ENSGT00440000039984.a ENSGT00940000158550 ENSGT00940000160793 ENSGT01100000263540.A.a ENSGT00390000018613.a ENSGT00950000183148.b.b ENSGT00940000166409 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00910000144152 ENSGT00950000183166.a.a.a.b.f ENSGT00940000177131 ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921 ENSGT00940000164766 Pinecone sodierfish MODERN SPECIES 6 gins1 (ENSMMDG00005015312) ninl (ENSMMDG00005015306) AIFM2 (ENSMMDG00005015301) elovl6l (ENSMMDG00005015296) ENSMMDG00005015294 nfkb2 (ENSMMDG00005014890) shld2 (ENSMMDG00005014868) #27 glud1a (ENSMMDG00005014815) #26 sncga (ENSMMDG00005014808) #24 mmrn2a (ENSMMDG00005014805) #23 ENSMMDG00005014803 prorsd1 (ENSMMDG00005014800) OPN4 (ENSMMDG00005014725) #19 ENSMMDG00005014717 ldb3a (ENSMMDG00005014689) ##20 bmpr1aa (ENSMMDG00005013396) #22 rps27a (ENSMMDG00005013371) ENSMMDG00005013361 EML6 (ENSMMDG00005013343) SPTBN1 (ENSMMDG00005010399) ENSMMDG00005010288 ACYP2 (ENSMMDG00005010286) foxg1d (ENSMMDG00005010285) slc30a6 (ENSMMDG00005009324) ENSMMDG00005009292 sult6b1 (ENSMMDG00005009281) sult6b1 (ENSMMDG00005009175) ENSMMDG00005009169 sult6b1 (ENSMMDG00005009162) ZNF365 (ENSMMDG00005009154) adob (ENSMMDG00005009151) Percomorphaceae ANCESTRAL SPECIES 45 ENSGT00940000160793 ENSGT01100000263540.A.a ENSGT00390000018613.a ENSGT00950000183148.b.b ENSGT00940000166409 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00910000144152 ENSGT00950000183166.a.a.a.b.f ENSGT00940000177131 ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b ENSGT00980000198878 ENSGT00940000154864.b ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f Tiger tail seahorse MODERN SPECIES 512 rbm45 (ENSHCOG00000000850) ENSHCOG00000020190 SNCG (ENSHCOG00000020177) #24 ldb3a (ENSHCOG00000020149) ##20 OPN4 (ENSHCOG00000020117) #19 prorsd1 (ENSHCOG00000020088) usp54a (ENSHCOG00000020073) ENSHCOG00000019953 #23 cbr1 (ENSHCOG00000019884) ENSHCOG00000019865 ##7 ENSHCOG00000019851 GFRA1 (ENSHCOG00000019843) PRKCE (ENSHCOG00000019820) epas1b (ENSHCOG00000019788) ENSHCOG00000019779 bmpr1aa (ENSHCOG00000019766) #22 rps27a (ENSHCOG00000019712) ENSHCOG00000019703 B4GALT3 (ENSHCOG00000019660) sult6b1 (ENSHCOG00000019615) slc30a6 (ENSHCOG00000019603) ENSHCOG00000019549 ENSHCOG00000019542 ENSHCOG00000019538 SPTBN1 (ENSHCOG00000019522) ENSHCOG00000019415 adob (ENSHCOG00000019401) ENSHCOG00000019396 kif11 (ENSHCOG00000019380) ENSHCOG00000018938 slc22a15 (ENSHCOG00000018929) Percomorphaceae_B ANCESTRAL SPECIES 4 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000156591 ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00910000144152 ENSGT00950000183166.a.a.a.b.f ENSGT00940000177131 ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00980000198878 ENSGT00940000154864.b ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f Ovalentaria ANCESTRAL SPECIES 18 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000156591 ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000177131 ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00980000198878 ENSGT00940000154864.b ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f Atherinomorphae ANCESTRAL SPECIES 41 ENSGT00950000183148.b.b ENSGT00940000166409 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT00940000170913 ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 Oryzias ANCESTRAL SPECIES 6 ENSGT01050000244965.a.b ENSGT00390000018613.a ENSGT00390000016929 ENSGT00950000183165.b.a.e.b.d.b ENSGT00950000183165.b.a.e.a ENSGT00950000183148.b.b ENSGT00940000166409 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00950000183175.A.c #24 ENSGT00940000170913 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00950000182812.C ENSGT00940000157820.a.b.cb ENSGT00950000183166.a.a.a.b.f ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab ENSGT00940000154556.a.b Oryzias_b ANCESTRAL SPECIES 7 ENSGT00940000155061.a.b.k.a ENSGT01050000244965.a.b ENSGT00390000018613.a ENSGT00390000016929 ENSGT00950000183165.b.a.e.b.d.b ENSGT00950000183165.b.a.e.a ENSGT00950000183148.b.b ENSGT00940000166409 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00950000183175.A.c #24 ENSGT00940000170913 ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00950000182812.C ENSGT00940000157820.a.b.cb ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT00940000155337.ab ENSGT00940000154556.a.b ENSGT00940000156841.a.a ENSGT00940000156327.l Indian medaka MODERN SPECIES 27 elovl6l (ENSOMEG00000022491) ENSOMEG00000000593 gtf3c3 (ENSOMEG00000022536) ENSOMEG00000022517 ENSOMEG00000022557 pygb (ENSOMEG00000022587) abhd12 (ENSOMEG00000022600) gins1 (ENSOMEG00000022610) ninl (ENSOMEG00000022666) SNCG (ENSOMEG00000022691) #24 ENSOMEG00000022699 ENSOMEG00000022707 prorsd1 (ENSOMEG00000022715) OPN4 (ENSOMEG00000022728) #19 ldb3a (ENSOMEG00000022787) ##20 bmpr1aa (ENSOMEG00000022835) #22 ENSOMEG00000022851 rps27a (ENSOMEG00000022866) ENSOMEG00000000614 ENSOMEG00000022888 b3gnt2b (ENSOMEG00000022896) EHBP1 (ENSOMEG00000022982) otx1 (ENSOMEG00000023010) WDPCP (ENSOMEG00000023058) MDH1 (ENSOMEG00000023091) ugp2b (ENSOMEG00000023112) peli1b (ENSOMEG00000023127) ENSOMEG00000023167 ENSOMEG00000023188 lgalslb (ENSOMEG00000023198) actr2a (ENSOMEG00000023221) Javanese ricefish MODERN SPECIES 6 gtf3c3 (ENSOJAG00000005810) ENSOJAG00000005793 ENSOJAG00000005788 ENSOJAG00000005779 pygb (ENSOJAG00000003877) abhd12 (ENSOJAG00000003496) gins1 (ENSOJAG00000003478) ninl (ENSOJAG00000003447) SNCG (ENSOJAG00000003429) #24 ENSOJAG00000003409 ENSOJAG00000003378 ENSOJAG00000003326 prorsd1 (ENSOJAG00000003319) OPN4 (ENSOJAG00000003269) #19 ldb3a (ENSOJAG00000003132) ##20 bmpr1aa (ENSOJAG00000002628) #22 rps27a (ENSOJAG00000002458) ENSOJAG00000002448 b3gnt2b (ENSOJAG00000002438) ENSOJAG00000002417 ENSOJAG00000002407 EHBP1 (ENSOJAG00000002231) otx1 (ENSOJAG00000002138) ENSOJAG00000002126 ENSOJAG00000002113 WDPCP (ENSOJAG00000002012) MDH1 (ENSOJAG00000001886) ugp2b (ENSOJAG00000001808) peli1b (ENSOJAG00000001747) ENSOJAG00000020511 lgalslb (ENSOJAG00000020506) Oryzias_a ANCESTRAL SPECIES 4 ENSGT00940000155061.a.b.k.a ENSGT01050000244965.a.b ENSGT00390000018613.a ENSGT00390000016929 ENSGT00950000183165.b.a.e.b.d.b ENSGT00950000183148.b.b ENSGT00940000166409 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00950000183175.A.c #24 ENSGT00940000170913 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00950000182812.C ENSGT00940000157820.a.b.cb ENSGT00950000183166.a.a.a.b.f ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 ENSGT00530000063410.a.q.a ENSGT00940000153464.B.z.b ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000166587 ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab ENSGT00940000154556.a.b Japanese Medaka HdrR MODERN SPECIES 6 ENSORLG00000002919 ELOVL6 (ENSORLG00000002876) ENSORLG00000024716 gtf3c3 (ENSORLG00000002865) ENSORLG00000002858 pygb (ENSORLG00000002852) abhd12 (ENSORLG00000002780) gins1 (ENSORLG00000002756) ninl (ENSORLG00000002727) sncga (ENSORLG00000002687) #24 ENSORLG00000028949 ENSORLG00000002678 prorsd1 (ENSORLG00000025145) OPN4 (ENSORLG00000002633) #19 ldb3a (ENSORLG00000002622) ##20 bmpr1aa (ENSORLG00000002596) #22 ENSORLG00000028617 rps27a (ENSORLG00000029546) ENSORLG00000030264 ENSORLG00000024628 ENSORLG00000002570 b3gnt2b (ENSORLG00000002565) EHBP1 (ENSORLG00000002562) otx1 (ENSORLG00000028142) WDPCP (ENSORLG00000029431) mdh1ab (ENSORLG00000002524) ugp2b (ENSORLG00000002512) peli1b (ENSORLG00000002477) ENSORLG00000027511 ENSORLG00000022965 lgalslb (ENSORLG00000028938) Chinese medaka MODERN SPECIES 5319 entpd6 (ENSOSIG00000014928) shld2 (ENSOSIG00000001621) #27 nfkb2 (ENSOSIG00000001673) ENSOSIG00000002201 elovl6l (ENSOSIG00000007962) ENSOSIG00000007963 gtf3c3 (ENSOSIG00000007965) ENSOSIG00000008181 abhd12 (ENSOSIG00000008458) gins1 (ENSOSIG00000008504) sncga (ENSOSIG00000008511) #24 ENSOSIG00000008517 prorsd1 (ENSOSIG00000008625) OPN4 (ENSOSIG00000008626) #19 ldb3a (ENSOSIG00000008659) ##20 bmpr1aa (ENSOSIG00000008678) #22 ENSOSIG00000010317 rps27a (ENSOSIG00000010319) Cyprinodontiformes ANCESTRAL SPECIES 37 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT00940000170913 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b.f ENSGT00940000157820.a.b ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00530000063713.a ENSGT00390000011103.A.q ENSGT00940000154864.b ENSGT00940000155564.m ENSGT00980000198878 ENSGT00940000154864.a.b.d ENSGT00940000154864.a.b.c.a Aplocheiloidei ANCESTRAL SPECIES 254 ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000155571.A ENSGT00530000063713.a ENSGT00390000011103.A.q ENSGT00940000154864.a.b.d Mangrove rivulus MODERN SPECIES 269 OPN4 (ENSKMAG00000004756) #19 ldb3a (ENSKMAG00000004681) ##20 bmpr1aa (ENSKMAG00000004606) #22 usp54a (ENSKMAG00000004563) ENSKMAG00000004552 ACYP2 (ENSKMAG00000004484) SPTBN1 (ENSKMAG00000004313) ENSKMAG00000004288 EML6 (ENSKMAG00000004029) Turquoise killifish MODERN SPECIES 119 ldb3a (ENSNFUG00015020920) ##20 bmpr1aa (ENSNFUG00015020927) #22 Cyprinodontoidei ANCESTRAL SPECIES 40 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT00940000170913 ENSGT00940000156568 ENSGT00940000177131 ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00530000063713.a ENSGT00390000011103.A.q ENSGT00940000158908.n ENSGT00940000159084 ENSGT00940000159934 ENSGT00940000160678.b ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921 ENSGT00610000086518.a ENSGT00940000164766 ENSGT00940000156410.h ENSGT00800000124060.A.b ENSGT01100000264800 ENSGT01030000234575.c.a.a.a.a.a.b.b.b.a NAME_4 ANCESTRAL SPECIES 462 ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 Mummichog MODERN SPECIES 877 ENSFHEG00000017126 prorsd1 (ENSFHEG00000017142) OPN4 (ENSFHEG00000017169) #19 ldb3a (ENSFHEG00000017268) ##20 bmpr1aa (ENSFHEG00000017334) #22 Sheepshead minnow MODERN SPECIES 1046 prorsd1 (ENSCVAG00000009594) ENSCVAG00000009586 #19 ldb3a (ENSCVAG00000009560) ##20 bmpr1aa (ENSCVAG00000009551) #22 ENSCVAG00000009519 ENSCVAG00000009513 ENSCVAG00000009506 Poeciliinae ANCESTRAL SPECIES 36 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133.`b #27 ENSGT00950000183175.A.c #24 ENSGT00940000170913 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b.f ENSGT00940000157820.a.b ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00530000063713.a ENSGT00390000011103.A.q ENSGT00940000154864.b ENSGT00940000159084 ENSGT00940000159934 ENSGT00940000160678.b ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921.h ENSGT00610000086518.a.bb.a ENSGT00610000086518.a.bb.b ENSGT00940000164766 ENSGT00610000086518.a.cb ENSGT00940000156410.h ENSGT00800000124060.A.b Platyfish MODERN SPECIES 14 ENSXMAG00000022281 ENSXMAG00000014896 nfkb2 (ENSXMAG00000000193) glud1a (ENSXMAG00000015941) #26 shld2 (ENSXMAG00000000185) #27 sncga (ENSXMAG00000027253) #24 ENSXMAG00000000182 rtn4a (ENSXMAG00000000174) ENSXMAG00000025973 rps27a (ENSXMAG00000000171) ENSXMAG00000015921 prorsd1 (ENSXMAG00000028479) OPN4 (ENSXMAG00000005827) #19 ENSXMAG00000029306 ##20 ldb3a (ENSXMAG00000028463) ##20 bmpr1aa (ENSXMAG00000004259) #22 ENSXMAG00000022447 ENSXMAG00000028942 ENSXMAG00000005026 ENSXMAG00000018802 ENSXMAG00000026710 sult6b1 (ENSXMAG00000004903) slc30a6 (ENSXMAG00000004899) foxg1d (ENSXMAG00000020002) adob (ENSXMAG00000020001) EGR2 (ENSXMAG00000004898) kif11 (ENSXMAG00000024825) ENSXMAG00000026552 ENSXMAG00000023954 ENSXMAG00000028375 slc22a15 (ENSXMAG00000006658) Poecilia ANCESTRAL SPECIES 59 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133.`b #27 ENSGT00950000183175.A.c #24 ENSGT00940000170913 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b.f ENSGT00940000157820.a.b ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00530000063713.a ENSGT00390000011103.A.q ENSGT00980000198878 ENSGT00940000154864.a.b.d ENSGT00940000155564.m Guppy MODERN SPECIES 445 elovl6l (ENSPREG00000012840) PSD (ENSPREG00000012811) nfkb2 (ENSPREG00000012699) glud1a (ENSPREG00000012659) #26 shld2 (ENSPREG00000012638) #27 sncga (ENSPREG00000012556) #24 ENSPREG00000012526 rtn4a (ENSPREG00000012511) ENSPREG00000012498 rps27a (ENSPREG00000012478) ENSPREG00000012460 prorsd1 (ENSPREG00000012432) OPN4 (ENSPREG00000012405) #19 ldb3a (ENSPREG00000012365) ##20 ENSPREG00000012348 bmpr1aa (ENSPREG00000012324) #22 ENSPREG00000012303 ENSPREG00000012287 ENSPREG00000012273 ENSPREG00000012251 ENSPREG00000012218 EML6 (ENSPREG00000012147) ENSPREG00000012118 sult6b1 (ENSPREG00000012075) slc30a6 (ENSPREG00000012044) foxg1d (ENSPREG00000012020) adob (ENSPREG00000012002) EGR2 (ENSPREG00000011993) kif11 (ENSPREG00000011297) ENSPREG00000011177 slc22a15 (ENSPREG00000011151) NAME_6 ANCESTRAL SPECIES 240 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133.`b #27 ENSGT00390000003133.ab #27 ENSGT00950000183175.A.c #24 ENSGT00940000170913 ENSGT00940000156568 ENSGT00950000183166.a.a.a.b.f ENSGT00940000157820.a.b ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00530000063713.a ENSGT00390000011103.A.q ENSGT00940000154864.a.b.d ENSGT00940000155564.m Sailfin molly MODERN SPECIES 2590 bmpr1aa (ENSPLAG00000008558) #22 ENSPLAG00000008537 ENSPLAG00000008532 SPTBN1 (ENSPLAG00000008511) Amazon molly MODERN SPECIES 672 elovl6l (ENSPFOG00000012317) PSD (ENSPFOG00000012363) nfkb2 (ENSPFOG00000012589) glud1a (ENSPFOG00000012895) #26 ENSPFOG00000012956 #27 SNCG (ENSPFOG00000012983) #24 ENSPFOG00000013015 ENSPFOG00000024299 ENSPFOG00000013030 ENSPFOG00000013069 rps27a (ENSPFOG00000013152) usp54a (ENSPFOG00000023469) prorsd1 (ENSPFOG00000013181) OPN4 (ENSPFOG00000013200) #19 ENSPFOG00000013210 ##20 bmpr1aa (ENSPFOG00000013261) #22 ENSPFOG00000013365 ACYP2 (ENSPFOG00000013371) ENSPFOG00000022828 SPTBN1 (ENSPFOG00000023466) ENSPFOG00000013417 EML6 (ENSPFOG00000023728) ENSPFOG00000022552 Ovalentaria_B ANCESTRAL SPECIES 7 ENSGT00940000166409 ENSGT00950000183148.b.b ENSGT00390000018613.a ENSGT00650000094737 ENSGT00940000155061.a.b.k.a ENSGT00940000156591 ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000177131 ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00980000198878 ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921 Cichlidae ANCESTRAL SPECIES 38 ENSGT00390000013968 ENSGT00940000166409 ENSGT00390000018613.a ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000156591 ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000177131 ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00980000198878 ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921 Pseudocrenilabrinae ANCESTRAL SPECIES 32 ENSGT00390000013968 ENSGT00940000166409 ENSGT00390000018613.a ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000156591 ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000177131 ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00980000198878 ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921 Pseudocrenilabrinae_A ANCESTRAL SPECIES 11 ENSGT00390000013968 ENSGT00940000166409 ENSGT00390000018613.a ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000156591 ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b.eb ENSGT00950000183166.a.a.a.b.f ENSGT00940000177131 ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00980000198878 ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921 Haplochromini ANCESTRAL SPECIES 10 ENSGT00940000166409 ENSGT00390000018613.a ENSGT01050000244965.a.b ENSGT00390000004989.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT00440000033965.f ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965.e ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b.eb ENSGT00950000183166.a.a.a.b.f ENSGT00940000177131 ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00980000198878 ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921 Burton s mouthbrooder MODERN SPECIES 737 prorsd1 (ENSHBUG00000002785) OPN4 (ENSHBUG00000002800) #19 ldb3a (ENSHBUG00000002873) ##20 bmpr1aa (ENSHBUG00000003320) #22 rps27a (ENSHBUG00000003375) ENSHBUG00000003390 ENSHBUG00000000071 rtn4a (ENSHBUG00000003412) EML6 (ENSHBUG00000003440) ENSHBUG00000003460 SPTBN1 (ENSHBUG00000003534) ENSHBUG00000003545 ACYP2 (ENSHBUG00000003557) Haplochromini_A ANCESTRAL SPECIES 8 ENSGT00390000013968 ENSGT00940000166409 ENSGT00390000018613.a ENSGT01050000244965.a.b ENSGT00390000004989.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965.e ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b.eb ENSGT00910000144152 ENSGT00950000183166.a.a.a.b.f ENSGT00940000177131 ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00980000198878 ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f Haplochromini_B ANCESTRAL SPECIES 5 ENSGT00390000013968 ENSGT00940000166409 ENSGT00390000018613.a ENSGT01050000244965.a.b ENSGT00390000004989.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965.e ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b.eb ENSGT00910000144152 ENSGT00950000183166.a.a.a.b.f ENSGT00940000177131 ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00980000198878 ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f Eastern happy MODERN SPECIES 4 gins1 (ENSACLG00000003544) abhd12 (ENSACLG00000003503) ENSACLG00000003493 elovl6l (ENSACLG00000003479) ENSACLG00000003473 PSD (ENSACLG00000003404) nfkb2 (ENSACLG00000003145) glud1a (ENSACLG00000003101) #26 shld2 (ENSACLG00000003090) #27 sncga (ENSACLG00000003071) #24 mmrn2a (ENSACLG00000003020) #23 usp54a (ENSACLG00000002941) ENSACLG00000002924 OPN4 (ENSACLG00000002864) #19 ldb3a (ENSACLG00000002832) ##20 bmpr1aa (ENSACLG00000002754) #22 RPS27A (ENSACLG00000002705) CLHC1 (ENSACLG00000002692) ENSACLG00000002685 RTN4 (ENSACLG00000002595) EML6 (ENSACLG00000002504) SPTBN1 (ENSACLG00000002334) ACYP2 (ENSACLG00000002159) ENSACLG00000002131 slc30a6 (ENSACLG00000002057) sult6b1 (ENSACLG00000002046) ZNF365 (ENSACLG00000002042) adob (ENSACLG00000001832) EGR2 (ENSACLG00000001824) kif11 (ENSACLG00000001740) ENSACLG00000001728 Zebra mbuna MODERN SPECIES 1095 PDZD8 (ENSMZEG00005005129) ENSMZEG00005005117 ENSMZEG00005005007 exo1 (ENSMZEG00005004947) yipf4 (ENSMZEG00005004927) ENSMZEG00005004923 ENSMZEG00005004904 ncapd3 (ENSMZEG00005004883) cdk1 (ENSMZEG00005004857) ctu2 (ENSMZEG00005004780) RNF166 (ENSMZEG00005004750) cyp17a1 (ENSMZEG00005004704) ENSMZEG00005004678 OPN4 (ENSMZEG00005004638) #19 ldb3a (ENSMZEG00005004579) ##20 bmpr1aa (ENSMZEG00005004519) #22 rps27a (ENSMZEG00005004484) ENSMZEG00005004449 usp54a (ENSMZEG00005004411) mmrn2a (ENSMZEG00005004369) #23 sncga (ENSMZEG00005004341) #24 shld2 (ENSMZEG00005004316) #27 glud1a (ENSMZEG00005004274) #26 nfkb2 (ENSMZEG00005004240) ENSMZEG00005004224 ENSMZEG00005004214 ENSMZEG00005004203 ENSMZEG00005004195 ENSMZEG00005004190 ENSMZEG00005004178 elovl6l (ENSMZEG00005004171) P. nyererei MODERN SPECIES 428 abhd12 (ENSPNYG00000019484) ENSPNYG00000019514 elovl6l (ENSPNYG00000019523) ENSPNYG00000019536 ENSPNYG00000019546 ENSPNYG00000019556 nfkb2 (ENSPNYG00000019574) glud1a (ENSPNYG00000019695) #26 shld2 (ENSPNYG00000019749) #27 sncga (ENSPNYG00000019813) #24 mmrn2a (ENSPNYG00000019855) #23 ENSPNYG00000019885 ENSPNYG00000019909 OPN4 (ENSPNYG00000019929) #19 ldb3a (ENSPNYG00000019956) ##20 bmpr1aa (ENSPNYG00000019966) #22 rps27a (ENSPNYG00000019989) ENSPNYG00000020015 ENSPNYG00000020039 ENSPNYG00000020054 EML6 (ENSPNYG00000020084) SPTBN1 (ENSPNYG00000020190) ACYP2 (ENSPNYG00000020290) slc30a6 (ENSPNYG00000020307) sult6b1 (ENSPNYG00000020361) ZNF365 (ENSPNYG00000020365) adob (ENSPNYG00000020377) EGR2 (ENSPNYG00000020385) ENSPNYG00000020394 ENSPNYG00000020410 ENSPNYG00000020420 Lyretail cichlid MODERN SPECIES 462 ENSNBRG00000009874 gins1 (ENSNBRG00000009908) abhd12 (ENSNBRG00000009938) elovl6l (ENSNBRG00000010008) ENSNBRG00000010111 ENSNBRG00000010121 ENSNBRG00000010159 ENSNBRG00000010307 #26 ENSNBRG00000010329 #27 SNCG (ENSNBRG00000010349) #24 ENSNBRG00000010374 ENSNBRG00000010408 prorsd1 (ENSNBRG00000010432) OPN4 (ENSNBRG00000010462) #19 ldb3a (ENSNBRG00000010667) ##20 bmpr1aa (ENSNBRG00000010682) #22 rps27a (ENSNBRG00000010708) ENSNBRG00000010727 ENSNBRG00000010734 Nile tilapia MODERN SPECIES 4 ENSONIG00000037381 prorsd1 (ENSONIG00000007119) OPN4 (ENSONIG00000007115) #19 ldb3a (ENSONIG00000007106) ##20 bmpr1aa (ENSONIG00000016072) #22 rps27a (ENSONIG00000016075) ENSONIG00000034645 ENSONIG00000030310 ENSONIG00000035641 ENSONIG00000028015 ENSONIG00000034052 ENSONIG00000038786 HTR7 (ENSONIG00000015494) ARFGEF3 (ENSONIG00000015488) ENSONIG00000042548 ENSONIG00000031517 ANKRD1 (ENSONIG00000015484) pcgf5a (ENSONIG00000015483) HECTD2 (ENSONIG00000015479) ppp1r3c (ENSONIG00000015478) Midas cichlid MODERN SPECIES 9 RNF123 (ENSACIG00000002826) AMIGO3 (ENSACIG00000002917) aldh4a1 (ENSACIG00000002922) sncga (ENSACIG00000002945) #24 ENSACIG00000002956 usp54a (ENSACIG00000003003) prorsd1 (ENSACIG00000003099) OPN4 (ENSACIG00000003123) #19 ENSACIG00000003204 ##20 ldb3a (ENSACIG00000003216) ##20 bmpr1aa (ENSACIG00000003249) #22 rps27a (ENSACIG00000003269) AIFM2 (ENSACIG00000003288) entpd6 (ENSACIG00000003387) vsx1 (ENSACIG00000003497) ENSACIG00000003515 acss1 (ENSACIG00000003543) apmap (ENSACIG00000003569) CST7 (ENSACIG00000003585) SYNDIG1 (ENSACIG00000003603) ENSACIG00000003621 ENSACIG00000003653 ENSACIG00000003738 ENSACIG00000003759 ppp2r5d (ENSACIG00000003769) mea1 (ENSACIG00000003821) Pomacentridae ANCESTRAL SPECIES 147 ENSGT00650000094737 ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00980000198878 ENSGT00390000011103.A.q ENSGT00940000165356 ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 Pomacentridae_A ANCESTRAL SPECIES 70 ENSGT00650000094737 ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00980000198878 ENSGT00390000011103.A.q ENSGT00940000165356 ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00390000003874.a.b ENSGT00940000176046 ENSGT00940000157065 ENSGT00390000013113 Amphiprion ANCESTRAL SPECIES 87 ENSGT00650000094737 ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00980000198878 ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00390000003874.a.b ENSGT00940000176046 ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000153577.A Orange clownfish MODERN SPECIES 12 ENSAPEG00000009191 GPR155 (ENSAPEG00000009198) tmem41ab (ENSAPEG00000009264) ENSAPEG00000009294 PSD (ENSAPEG00000009309) nfkb2 (ENSAPEG00000009378) glud1a (ENSAPEG00000009403) #26 shld2 (ENSAPEG00000009460) #27 sncga (ENSAPEG00000009514) #24 mmrn2a (ENSAPEG00000009542) #23 ENSAPEG00000009603 prorsd1 (ENSAPEG00000009628) OPN4 (ENSAPEG00000009641) #19 ENSAPEG00000009707 ##20 ldb3a (ENSAPEG00000010020) ##20 bmpr1aa (ENSAPEG00000010247) #22 rps27a (ENSAPEG00000010300) ENSAPEG00000010336 EML6 (ENSAPEG00000010407) SPTBN1 (ENSAPEG00000010527) ENSAPEG00000010671 ACYP2 (ENSAPEG00000010683) ENSAPEG00000010687 ENSAPEG00000010712 slc30a6 (ENSAPEG00000010732) sult6b1 (ENSAPEG00000010805) pdxkb (ENSAPEG00000010835) ENSAPEG00000010883 ITSN1 (ENSAPEG00000010916) cryzl1 (ENSAPEG00000011176) setd4 (ENSAPEG00000011191) Clown anemonefish MODERN SPECIES 2763 bmpr1aa (ENSAOCG00000006067) #22 rps27a (ENSAOCG00000000282) Spiny chromis MODERN SPECIES 1395 bmpr1aa (ENSAPOG00000022811) #22 rps27a (ENSAPOG00000022780) ENSAPOG00000022752 ENSAPOG00000022717 Bicolor damselfish MODERN SPECIES 789 nfkb2 (ENSSPAG00000022648) glud1a (ENSSPAG00000022650) #26 shld2 (ENSSPAG00000022666) #27 sncga (ENSSPAG00000022673) #24 SNCG (ENSSPAG00000022681) #24 ENSSPAG00000022701 #23 ENSSPAG00000022708 prorsd1 (ENSSPAG00000022713) OPN4 (ENSSPAG00000022715) #19 ENSSPAG00000022725 ##20 ENSSPAG00000022732 ##20 bmpr1aa (ENSSPAG00000022737) #22 rps27a (ENSSPAG00000022744) ENSSPAG00000022752 Percomorphaceae_C ANCESTRAL SPECIES 18 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000156591 ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921 ENSGT00940000164766 ENSGT00610000086518.a Eupercaria ANCESTRAL SPECIES 15 ENSGT00660000095541.a.a ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00650000094737 ENSGT00940000155061.a.b.k.a ENSGT00940000156591 ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921 ENSGT00610000086518.a ENSGT00940000164766 Tetraodontidae ANCESTRAL SPECIES 7 ENSGT00610000086518.a ENSGT00940000155921 ENSGT00940000158394.f ENSGT00390000014082.a.a ENSGT00940000154864.a.b.d ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000165356 ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00890000139531 ENSGT00390000012040 ENSGT00510000047893 ENSGT00940000156711.k.b ENSGT00390000015293 ENSGT00530000063106.C ENSGT00390000013790 ENSGT00390000005954 ENSGT00390000001134.a.b ENSGT00950000182999.b.b ENSGT00940000154939.e.b ENSGT00390000013594 ENSGT00940000156416.d ENSGT00950000183033.a.a.c.a Tetraodon DUPLICATION Tetraodon MODERN SPECIES 9 foxg1d (ENSTNIG00000002856) slc30a6 (ENSTNIG00000002855) ENSTNIG00000007167 ENSTNIG00000000895 prorsd1 (ENSTNIG00000007168) OPN4 (ENSTNIG00000007169) #19 ENSTNIG00000007170 ##20 ldb3b (ENSTNIG00000005920) #20 ldb3a (ENSTNIG00000018687) ##20 bmpr1aa (ENSTNIG00000018688) #22 rps27a (ENSTNIG00000018689) ENSTNIG00000017042 cog2 (ENSTNIG00000017041) pgbd5 (ENSTNIG00000017040) KLF5 (ENSTNIG00000017039) pibf1 (ENSTNIG00000017038) DIS3 (ENSTNIG00000017037) bora (ENSTNIG00000017036) dachc (ENSTNIG00000017035) ubac2 (ENSTNIG00000017034) ANK3 (ENSTNIG00000017033) ccdc6a (ENSTNIG00000017032) slc16a9a (ENSTNIG00000017031) phyhipla (ENSTNIG00000017030) BICC1 (ENSTNIG00000019377) Tetraodon MODERN SPECIES 26 ENSTNIG00000000571 ccdc106a (ENSTNIG00000002163) ENSTNIG00000002164 ENSTNIG00000002165 ENSTNIG00000000063 ENSTNIG00000001583 hlfa (ENSTNIG00000002167) dtd2 (ENSTNIG00000000153) dtd2 (ENSTNIG00000000949) HMX3 (ENSTNIG00000002168) dtd2 (ENSTNIG00000002169) josd2 (ENSTNIG00000002172) tsr2 (ENSTNIG00000002173) ENSTNIG00000002175 ENSTNIG00000002176 bmpr1aa (ENSTNIG00000002177) #22 ENSTNIG00000002178 asns (ENSTNIG00000002179) zdhhc12b (ENSTNIG00000000583) pnhd (ENSTNIG00000002181) efemp2a (ENSTNIG00000002182) ENSTNIG00000002183 ENSTNIG00000002184 ENSTNIG00000003087 ENSTNIG00000001731 ENSTNIG00000001345 ENSTNIG00000001609 ENSTNIG00000002186 SLC66A2 (ENSTNIG00000002187) ENSTNIG00000002188 ezh2 (ENSTNIG00000001024) Fugu MODERN SPECIES 16 cyp26c1 (ENSTRUG00000012794) ENSTRUG00000031133 ENSTRUG00000032964 ENSTRUG00000028933 ENSTRUG00000028648 ENSTRUG00000028373 pcgf5a (ENSTRUG00000027842) ANKRD1 (ENSTRUG00000029402) ENSTRUG00000031636 SLC30A6 (ENSTRUG00000027347) sult6b1 (ENSTRUG00000011551) ENSTRUG00000029357 prorsd1 (ENSTRUG00000030948) OPN4 (ENSTRUG00000011365) #19 ldb3a (ENSTRUG00000021723) ##20 bmpr1aa (ENSTRUG00000011026) #22 rps27a (ENSTRUG00000010963) agt (ENSTRUG00000010811) cog2 (ENSTRUG00000010527) pgbd5 (ENSTRUG00000010498) KLF5 (ENSTRUG00000022894) pibf1 (ENSTRUG00000010204) DIS3 (ENSTRUG00000010021) ENSTRUG00000022481 mzt1 (ENSTRUG00000029823) dachc (ENSTRUG00000026719) ubac2 (ENSTRUG00000009717) ANK3 (ENSTRUG00000009110) ccdc6a (ENSTRUG00000009022) slc16a9a (ENSTRUG00000008893) FAM13C (ENSTRUG00000026950) Eupecaria_A ANCESTRAL SPECIES 1 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00650000094737 ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921 ENSGT00610000086518.a ENSGT00940000164766 Ballan wrasse MODERN SPECIES 18 gins1 (ENSLBEG00000000019) ninl (ENSLBEG00000000021) AIFM2 (ENSLBEG00000000024) elovl6l (ENSLBEG00000000028) ENSLBEG00000000033 nfkb2 (ENSLBEG00000000044) glud1a (ENSLBEG00000000053) #26 shld2 (ENSLBEG00000000077) #27 sncga (ENSLBEG00000000082) #24 mmrn2a (ENSLBEG00000000094) #23 ENSLBEG00000000097 ENSLBEG00000000102 prorsd1 (ENSLBEG00000000123) OPN4 (ENSLBEG00000000142) #19 ldb3a (ENSLBEG00000000229) ##20 bmpr1aa (ENSLBEG00000000487) #22 rps27a (ENSLBEG00000000541) ENSLBEG00000000579 ENSLBEG00000000617 EML6 (ENSLBEG00000000687) ENSLBEG00000000839 SPTBN1 (ENSLBEG00000000867) ACYP2 (ENSLBEG00000001021) foxg1d (ENSLBEG00000001046) SLC30A6 (ENSLBEG00000001082) sult6b1 (ENSLBEG00000001156) ZNF365 (ENSLBEG00000001179) adob (ENSLBEG00000001195) EGR2 (ENSLBEG00000001215) kif11 (ENSLBEG00000001240) ENSLBEG00000001436 Eupecaria_B ANCESTRAL SPECIES 3 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00650000094737 ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 ENSGT00940000154864.a.b.d ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921 ENSGT00610000086518.a ENSGT00940000164766 ENSGT00940000156410.h Perciformes ANCESTRAL SPECIES 17 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00650000094737 ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000162312.h.g.a ENSGT00940000154864.a.b.d ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921 ENSGT00610000086518.a Cottioidei ANCESTRAL SPECIES 17 ENSGT00940000176046 ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000153577.A ENSGT00510000046499 ENSGT00940000156754.a.a ##7 ENSGT00610000086460 ENSGT00940000155560.l ENSGT00940000154711.a.a ENSGT00940000168267 ENSGT00940000161285.a ENSGT00940000163454.a.a.a.b.a.a.a.b ENSGT00530000064150 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921 ENSGT00610000086518.a ENSGT00940000164766 Lumpfish MODERN SPECIES 6 ENSCLMG00005007441 ENSCLMG00005007702 ENSCLMG00005007703 PRKCE (ENSCLMG00005007707) epas1b (ENSCLMG00005008167) ENSCLMG00005008171 SLC22A7 (ENSCLMG00005008365) ENSCLMG00005008367 ENSCLMG00005008370 ENSCLMG00005008420 lhb (ENSCLMG00005008422) ENSCLMG00005008425 ARFGEF3 (ENSCLMG00005008438) OPN4 (ENSCLMG00005008442) #19 ldb3a (ENSCLMG00005008447) ##20 bmpr1aa (ENSCLMG00005008795) #22 rps27a (ENSCLMG00005010790) ENSCLMG00005010791 rtn4a (ENSCLMG00005010794) EML6 (ENSCLMG00005010798) SPTBN1 (ENSCLMG00005010879) ENSCLMG00005021090 foxg1d (ENSCLMG00005021091) slc30a6 (ENSCLMG00005021095) sult6b1 (ENSCLMG00005021100) ZNF365 (ENSCLMG00005021101) adob (ENSCLMG00005021103) EGR2 (ENSCLMG00005021104) kif11 (ENSCLMG00005021109) ENSCLMG00005021225 slc22a15 (ENSCLMG00005021226) Stickleback MODERN SPECIES 6 setd4 (ENSGACG00000011319) cbr1l (ENSGACG00000011333) ENSGACG00000011392 ENSGACG00000011398 ENSGACG00000011400 PRKCE (ENSGACG00000011409) epas1b (ENSGACG00000011414) SLC22A7 (ENSGACG00000011422) ENSGACG00000011467 cox20 (ENSGACG00000011471) lhb (ENSGACG00000011475) ENSGACG00000011492 ARFGEF3 (ENSGACG00000011512) OPN4 (ENSGACG00000011528) #19 ldb3a (ENSGACG00000011532) ##20 bmpr1aa (ENSGACG00000011543) #22 rps27a (ENSGACG00000011558) ENSGACG00000011571 rtn4a (ENSGACG00000011574) EML6 (ENSGACG00000011586) ENSGACG00000011609 pdxkb (ENSGACG00000011614) plekha3 (ENSGACG00000011619) ENSGACG00000011623 nckap1 (ENSGACG00000011628) dusp19b (ENSGACG00000011638) zc3h15 (ENSGACG00000011648) rbm45 (ENSGACG00000011659) ENSGACG00000011687 gja5b (ENSGACG00000011699) ENSGACG00000011701 Perciformes_a ANCESTRAL SPECIES 93 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000162312.h.g.a ENSGT00940000154864.a.b.d ENSGT00390000011103.A.q ENSGT00940000160678.b Channel bull blenny MODERN SPECIES 6 ENSCGOG00000014051 ENSCGOG00000014046 ldb3a (ENSCGOG00000014041) ##20 bmpr1aa (ENSCGOG00000013161) #22 rps27a (ENSCGOG00000013095) ENSCGOG00000013089 ENSCGOG00000013033 RTN4 (ENSCGOG00000012996) ENSCGOG00000012991 EML6 (ENSCGOG00000012854) ENSCGOG00000012842 SPTBN1 (ENSCGOG00000002464) ACYP2 (ENSCGOG00000002148) ENSCGOG00000002144 ENSCGOG00000002142 foxg1b (ENSCGOG00000002140) ppp1r3ca (ENSCGOG00000002138) ENSCGOG00000002136 pcgf5a (ENSCGOG00000002127) Pike perch MODERN SPECIES 222 bmpr1aa (ENSSLUG00000007503) #22 rps27a (ENSSLUG00000009387) ENSSLUG00000009396 ENSSLUG00000009408 ENSSLUG00000009414 ENSSLUG00000009421 ENSSLUG00000009425 ENSSLUG00000009428 ENSSLUG00000009432 ENSSLUG00000009436 ENSSLUG00000009438 ENSSLUG00000009448 ENSSLUG00000009459 ENSSLUG00000009468 EML6 (ENSSLUG00000009493) ENSSLUG00000009502 Eupecaria_C ANCESTRAL SPECIES 72 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 Eupercaria_incertae_sedis ANCESTRAL SPECIES 99 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 Large yellow croaker MODERN SPECIES 45 ENSLCRG00005015595 ENSLCRG00005015592 ENSLCRG00005015591 ENSLCRG00005015589 ENSLCRG00005015587 ENSLCRG00005015584 lhb (ENSLCRG00005015562) ENSLCRG00005015561 ENSLCRG00005015560 ENSLCRG00005015559 mmrn2a (ENSLCRG00005015557) #23 ENSLCRG00005015556 prorsd1 (ENSLCRG00005015555) OPN4 (ENSLCRG00005015553) #19 ldb3a (ENSLCRG00005015549) ##20 bmpr1aa (ENSLCRG00005014956) #22 rps27a (ENSLCRG00005014953) ENSLCRG00005014949 ENSLCRG00005014916 ENSLCRG00005014914 European seabass MODERN SPECIES 1 degs1 (ENSDLAG00005024270) nvl (ENSDLAG00005024183) ENSDLAG00005027780 ENSDLAG00005033469 aprt (ENSDLAG00005026472) ENSDLAG00005034765 PIEZO1 (ENSDLAG00005023931) ENSDLAG00005023080 ENSDLAG00005022841 ENSDLAG00005022823 ENSDLAG00005028528 ENSDLAG00005032603 ENSDLAG00005021311 ENSDLAG00005033075 #19 ENSDLAG00005027523 ##20 bmpr1aa (ENSDLAG00005020951) #22 ENSDLAG00005030167 ENSDLAG00005020810 ENSDLAG00005035052 ENSDLAG00005020797 ENSDLAG00005020792 ENSDLAG00005020760 ENSDLAG00005020749 ANKRD1 (ENSDLAG00005020739) pcgf5a (ENSDLAG00005032934) HECTD2 (ENSDLAG00005020694) ppp1r3ca (ENSDLAG00005020687) FGFBP3 (ENSDLAG00005020683) ENSDLAG00005020681 ENSDLAG00005020667 ENSDLAG00005020661 Gilthead seabream MODERN SPECIES 6 ENSSAUG00010023720 gins1 (ENSSAUG00010023722) acss1 (ENSSAUG00010023725) ENSSAUG00010023727 ENSSAUG00010023728 vsx1 (ENSSAUG00010023729) ENSSAUG00010023730 ENSSAUG00010023731 apmap (ENSSAUG00010023735) ENSSAUG00010023737 CUL7 (ENSSAUG00010023784) prorsd1 (ENSSAUG00010024868) OPN4 (ENSSAUG00010024872) #19 ENSSAUG00010024873 ldb3a (ENSSAUG00010024880) ##20 bmpr1aa (ENSSAUG00010024902) #22 rps27a (ENSSAUG00010025299) ENSSAUG00010025302 ENSSAUG00010025305 Percomorphaceae_D ANCESTRAL SPECIES 19 ENSGT00940000170913 ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921 ENSGT00610000086518.a ENSGT00940000164766 Carangaria ANCESTRAL SPECIES 32 ENSGT00940000159934 ENSGT00940000160678.b ENSGT00390000011103.A.q ENSGT00940000154864.a.b.d ENSGT00940000155564.m ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b #26 ENSGT00390000003133 #27 ENSGT00950000183175.A.c #24 ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 Carangaria_A ANCESTRAL SPECIES 39 ENSGT00940000155921 ENSGT00940000158394.f ENSGT00390000014082.a.a ENSGT00530000063713.a ENSGT00940000159084 ENSGT00940000159934 ENSGT00940000165356 ENSGT00390000011103.A.q ENSGT00940000154864.a.b.d ENSGT00940000155564.m ENSGT00940000180908 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 Seriola ANCESTRAL SPECIES 98 ENSGT00950000183175.A.c #24 ENSGT00390000003133 #27 ENSGT00390000000854.c.b #26 ENSGT00940000164992 ENSGT00940000155061.a.b.k.a ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00660000095541.a.a ENSGT00390000013968 ENSGT00940000166409 ENSGT00940000180908 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 Greater amberjack MODERN SPECIES 55 shld2 (ENSSDUG00000003857) #27 glud1a (ENSSDUG00000003818) #26 nfkb2 (ENSSDUG00000003710) ENSSDUG00000003693 ENSSDUG00000003671 AIFM2 (ENSSDUG00000003663) elovl6l (ENSSDUG00000003647) ninl (ENSSDUG00000003532) gins1 (ENSSDUG00000003497) abhd12 (ENSSDUG00000003459) ENSSDUG00000003449 ENSSDUG00000003430 prorsd1 (ENSSDUG00000003417) OPN4 (ENSSDUG00000003401) #19 ldb3a (ENSSDUG00000003244) ##20 bmpr1aa (ENSSDUG00000003184) #22 rps27a (ENSSDUG00000003170) ENSSDUG00000003147 ENSSDUG00000003128 Yellowtail amberjack MODERN SPECIES 2568 bmpr1aa (ENSSLDG00000008154) #22 Barramundi perch MODERN SPECIES 456 ENSLCAG00010002673 #19 ldb3a (ENSLCAG00010002675) ##20 bmpr1aa (ENSLCAG00010002684) #22 rps27a (ENSLCAG00010002756) ENSLCAG00010002759 ENSLCAG00010002763 glud1a (ENSLCAG00010002770) #26 shld2 (ENSLCAG00010002793) #27 TTC7A (ENSLCAG00010002796) si:ch211-93n23.7 (ENSLCAG00010002799) calm2a (ENSLCAG00010002801) ENSLCAG00010002802 ENSLCAG00010002803 ENSLCAG00010002806 Pleuronectoidei ANCESTRAL SPECIES 48 ENSGT00940000155921 ENSGT00940000158394.f ENSGT00390000014082.a.a ENSGT00530000063713.a ENSGT00940000159084 ENSGT00940000159934 ENSGT00940000160678.b ENSGT00390000011103.A.q ENSGT00940000154864.a.b.d ENSGT00940000155564.m ENSGT01030000234633.C.a #23 ENSGT00940000155571.A ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000161285.a ENSGT00390000016158 ENSGT00940000163454.a.a.a.b.a.a.a.a ENSGT00940000164014.a.a ENSGT00940000154922.b.u.a ENSGT00940000154711.a.a ENSGT00940000155560.l ENSGT00390000005203 ENSGT00610000086460 ENSGT00940000156754.a.a ##7 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00390000013113 Turbot MODERN SPECIES 6 ENSSMAG00000030680 ENSSMAG00000025922 ZNF365 (ENSSMAG00000024524) ENSSMAG00000004254 ENSSMAG00000004269 ENSSMAG00000004327 ACYP2 (ENSSMAG00000028734) SPTBN1 (ENSSMAG00000004362) EML6 (ENSSMAG00000004483) ENSSMAG00000004554 #23 ENSSMAG00000004646 ENSSMAG00000004659 ENSSMAG00000004723 #19 ENSSMAG00000027128 ##20 ENSSMAG00000004763 ##20 bmpr1aa (ENSSMAG00000004783) #22 ENSSMAG00000030493 ENSSMAG00000004979 ENSSMAG00000005037 LHbeta (ENSSMAG00000005094) ENSSMAG00000032282 ENSSMAG00000005131 ENSSMAG00000005146 ENSSMAG00000005156 ENSSMAG00000005228 ENSSMAG00000006032 ENSSMAG00000006082 ENSSMAG00000006131 ENSSMAG00000006166 si:ch1073-126c3.2 (ENSSMAG00000006174) ENSSMAG00000006181 Tongue sole MODERN SPECIES 3 ENSCSEG00000001710 znf503 (ENSCSEG00000001704) XPO1 (ENSCSEG00000001693) ENSCSEG00000001688 SANBR (ENSCSEG00000001682) pex13 (ENSCSEG00000001674) REL (ENSCSEG00000001659) cdk1 (ENSCSEG00000001655) chchd1 (ENSCSEG00000001654) HNRNPLL (ENSCSEG00000001646) TNFAIP3 (ENSCSEG00000001638) perp (ENSCSEG00000001633) tspan14 (ENSCSEG00000001627) ENSCSEG00000001621 ldb3a (ENSCSEG00000001614) ##20 bmpr1aa (ENSCSEG00000001608) #22 rps27a (ENSCSEG00000001603) ENSCSEG00000001598 rtn4a (ENSCSEG00000001594) lhb (ENSCSEG00000001582) ENSCSEG00000001580 ENSCSEG00000001568 ENSCSEG00000001495 macroh2a2 (ENSCSEG00000001483) ENSCSEG00000001453 GBF1 (ENSCSEG00000001430) CCDC88A (ENSCSEG00000001262) ugp2b (ENSCSEG00000001237) MDH1 (ENSCSEG00000001022) WDPCP (ENSCSEG00000001003) otx1 (ENSCSEG00000000992) Anabantaria ANCESTRAL SPECIES 17 ENSGT00940000170913 ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921 ENSGT00610000086518.a ENSGT00940000164766 Zig-zag eel MODERN SPECIES 6 ENSMAMG00000027221 abhd12 (ENSMAMG00000022521) GINS1 (ENSMAMG00000022524) glud1a (ENSMAMG00000022526) #26 ENSMAMG00000022530 ENSMAMG00000022529 #24 ENSMAMG00000022533 ENSMAMG00000022536 ENSMAMG00000022537 ENSMAMG00000022538 ENSMAMG00000024932 ENSMAMG00000022542 #23 ENSMAMG00000022544 ENSMAMG00000022550 #19 ENSMAMG00000022552 ##20 bmpr1aa (ENSMAMG00000022553) #22 ENSMAMG00000022556 ENSMAMG00000022555 ENSMAMG00000022557 EML6 (ENSMAMG00000022561) SPTBN1 (ENSMAMG00000022569) ACYP2 (ENSMAMG00000026802) ENSMAMG00000022572 ENSMAMG00000022574 ENSMAMG00000022575 ENSMAMG00000022577 ENSMAMG00000022579 ENSMAMG00000022582 ENSMAMG00000022583 ENSMAMG00000022584 ENSMAMG00000022586 Anabantoidei ANCESTRAL SPECIES 17 ENSGT00940000170913 ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a #19 ENSGT00940000154877.B ##20 ENSGT00940000156225 #22 ENSGT00940000157820.a.b ENSGT00950000183166.a.a.a.b.f ENSGT00940000156568 ENSGT00940000155564.m ENSGT00940000154864.a.b.d ENSGT00390000011103.A.q ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063713.a ENSGT00390000014082.a.a ENSGT00940000158394.f ENSGT00940000155921 ENSGT00940000164766 ENSGT00610000086518.a Climbing perch MODERN SPECIES 6 ENSATEG00000021922 ENSATEG00000021917 ENSATEG00000006825 #24 ENSATEG00000021903 #27 ENSATEG00000006772 #26 ENSATEG00000021857 ENSATEG00000021842 ENSATEG00000021803 ENSATEG00000021794 ENSATEG00000021772 ENSATEG00000021745 ENSATEG00000025713 mmrn2a (ENSATEG00000021689) #23 ENSATEG00000021604 #19 ldb3a (ENSATEG00000021576) ##20 bmpr1aa (ENSATEG00000021529) #22 ENSATEG00000026909 CLHC1 (ENSATEG00000021499) ENSATEG00000021473 ENSATEG00000027869 EML6 (ENSATEG00000021374) SPTBN1 (ENSATEG00000019589) ACYP2 (ENSATEG00000019369) ENSATEG00000019364 ENSATEG00000019324 ENSATEG00000029188 ENSATEG00000019291 ENSATEG00000019223 ZNF365 (ENSATEG00000019200) ENSATEG00000019196 EGR2 (ENSATEG00000029637) Siamese fighting fish MODERN SPECIES 6 entpd6 (ENSBSLG00000016958) ENSBSLG00000016939 ENSBSLG00000016803 gins1 (ENSBSLG00000016768) ninl (ENSBSLG00000016626) elovl6l (ENSBSLG00000016537) SNCG (ENSBSLG00000016529) #24 shld2 (ENSBSLG00000016527) #27 glud1a (ENSBSLG00000016486) #26 nfkb2 (ENSBSLG00000016427) PSD (ENSBSLG00000016372) prorsd1 (ENSBSLG00000016366) ENSBSLG00000016361 OPN4 (ENSBSLG00000016349) #19 ldb3a (ENSBSLG00000016342) ##20 bmpr1aa (ENSBSLG00000016271) #22 rps27a (ENSBSLG00000016263) ENSBSLG00000016254 ENSBSLG00000016249 ENSBSLG00000016061 ENSBSLG00000015502 foxg1d (ENSBSLG00000015489) slc30a6 (ENSBSLG00000015217) sult6b1 (ENSBSLG00000015102) ZNF365 (ENSBSLG00000015090) adob (ENSBSLG00000015087) EGR2 (ENSBSLG00000015085) kif11 (ENSBSLG00000014878) ENSBSLG00000014862 slc22a15 (ENSBSLG00000014817) ENSBSLG00000014812 Osteoglossiformes ANCESTRAL SPECIES 18 ENSGT00940000159766.d ENSGT00940000162058 ENSGT00940000157303.f ENSGT00940000155310.a.a.a ENSGT00390000001094.nb ENSGT01030000234528.A.a.b ENSGT00940000160819 #28 ENSGT00390000014331 ENSGT00940000156481.a.a.a.a ENSGT00950000182924.A.b.a.a.i ENSGT00950000183054.b.c ENSGT00950000183027.a.b.c.b ENSGT00940000155571.B ENSGT01100000263502.B.a.a.d.b #19 ENSGT00940000154877.C #20 ENSGT00940000156225 #22 ENSGT00950000183175.A.d #24 ENSGT00390000000854.c.a ##26 ENSGT00940000164992.h ENSGT00940000155061.a.b.k.b ENSGT01050000244965.a.a ENSGT01030000234578.A.b.a.a.a ENSGT00950000183185.c.a.b ENSGT00940000169341 ENSGT01030000235288 ENSGT00940000165336.a ENSGT00940000164872 ENSGT01030000234641.b.a.b.a.a ENSGT00950000183002.C.c.a ENSGT00950000183002.B.b ENSGT00940000154078.a.a.a P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 18 ENSPKIG00000010898 #28 si:ch73-127m5.2 (ENSPKIG00000010913) ENSPKIG00000010950 ENSPKIG00000010990 ENSPKIG00000011013 ENSPKIG00000011042 ENSPKIG00000011089 ENSPKIG00000011182 ENSPKIG00000011222 sec24c (ENSPKIG00000011306) SYNPO2L (ENSPKIG00000011504) myoz1b (ENSPKIG00000011516) USP54 (ENSPKIG00000011549) opn4a (ENSPKIG00000011684) #19 ldb3b (ENSPKIG00000011805) #20 bmpr1ab (ENSPKIG00000011886) #22 sncgb (ENSPKIG00000011985) #24 glud1b (ENSPKIG00000012074) ##26 ENSPKIG00000012133 ENSPKIG00000012160 nfkb2 (ENSPKIG00000012183) ENSPKIG00000012233 zgc:92749 (ENSPKIG00000012292) zgc:154058 (ENSPKIG00000012318) mat1a (ENSPKIG00000012357) ENSPKIG00000012389 ENSPKIG00000012405 ENSPKIG00000012422 SMG9 (ENSPKIG00000012446) ENSPKIG00000012481 ENSPKIG00000012507 P. kingsleyae MODERN SPECIES 119 ENSPKIG00000008456 ENSPKIG00000008504 SYNPO2L (ENSPKIG00000008647) myoz1a (ENSPKIG00000008662) USP54 (ENSPKIG00000008718) ldb3a (ENSPKIG00000008914) ##20 bmpr1aa (ENSPKIG00000009058) #22 ENSPKIG00000009121 LTBP1 (ENSPKIG00000009148) ttc27 (ENSPKIG00000009196) BIRC6 (ENSPKIG00000009293) yipf4 (ENSPKIG00000009413) exo1 (ENSPKIG00000009478) ENSPKIG00000009580 ENSPKIG00000009594 PDZD8 (ENSPKIG00000009620) slc18a2 (ENSPKIG00000009658) kcnk18 (ENSPKIG00000009711) ENSPKIG00000009740 vax1 (ENSPKIG00000009767) atp6v1ba (ENSPKIG00000009808) shtn1 (ENSPKIG00000009916) Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 18 ENSSFOG00015025416 zgc:112285 (ENSSFOG00015003515) ENSSFOG00015030222 ENSSFOG00015003555 ENSSFOG00015003610 ENSSFOG00015003640 ENSSFOG00015003698 ENSSFOG00015003778 ENSSFOG00015003818 sec24c (ENSSFOG00015003892) SYNPO2L (ENSSFOG00015024320) myoz1b (ENSSFOG00015003967) USP54 (ENSSFOG00015003996) OPN4 (ENSSFOG00015004095) #19 ldb3b (ENSSFOG00015004137) #20 bmpr1ab (ENSSFOG00015004151) #22 sncgb (ENSSFOG00015027622) #24 glud1b (ENSSFOG00015032044) ##26 ENSSFOG00015033355 nfkb2 (ENSSFOG00015004286) ENSSFOG00015004390 zgc:92749 (ENSSFOG00015030277) ENSSFOG00015004436 ENSSFOG00015027197 ENSSFOG00015029808 ENSSFOG00015029757 zgc:154058 (ENSSFOG00015024448) mat1a (ENSSFOG00015003290) ENSSFOG00015003358 ENSSFOG00015003363 sfxn3 (ENSSFOG00015030404) Asian bonytongue MODERN SPECIES 23 TIMM23 (ENSSFOG00015030997) ncoa4 (ENSSFOG00015021221) ENSSFOG00015021213 ##29 ENSSFOG00015021181 chchd1 (ENSSFOG00015030129) ENSSFOG00015021146 zswim8 (ENSSFOG00015021096) NDST2 (ENSSFOG00015021003) CAMK2G (ENSSFOG00015020838) ENSSFOG00015020735 SYNPO2L (ENSSFOG00015030583) myoz1a (ENSSFOG00015020705) USP54 (ENSSFOG00015020660) OPN4 (ENSSFOG00015020611) #19 ldb3a (ENSSFOG00015020563) ##20 bmpr1aa (ENSSFOG00015020521) #22 mmrn2a (ENSSFOG00015020493) #23 sncga (ENSSFOG00015031179) #24 glud1a (ENSSFOG00015020453) #26 shld2 (ENSSFOG00015020419) #27 nfkb2 (ENSSFOG00015020393) PSD (ENSSFOG00015020339) ENSSFOG00015020243 AIFM2 (ENSSFOG00015020205) ninl (ENSSFOG00015020152) gins1 (ENSSFOG00015025088) abhd12 (ENSSFOG00015027870) pygb (ENSSFOG00015020040) ENSSFOG00015019993 entpd6 (ENSSFOG00015019960) vsx1 (ENSSFOG00015019941)