Amniota	ANCESTRAL SPECIES	25	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a	ENSGT00940000153691.a.b	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00990000204256	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000005410	ENSGT00940000166270	ENSGT00390000006293 #37	ENSGT00940000156938
Mammalia	ANCESTRAL SPECIES	13	ENSGT00940000153691.a.b	ENSGT01100000263508.A.d	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00940000167952	ENSGT00390000004738 #21	ENSGT00390000016908 #20	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00990000204256	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000005410	ENSGT00390000006293 #37	ENSGT00940000156938	ENSGT00390000014299
Theria	ANCESTRAL SPECIES	62				ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00940000167952	ENSGT00390000004738 #21	ENSGT00390000016908 #20	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410
Eutheria	ANCESTRAL SPECIES	31		ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00940000167952	ENSGT00390000009268	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Primates	ANCESTRAL SPECIES	21	ENSGT00940000165352	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Haplorrhini	ANCESTRAL SPECIES	21	ENSGT00940000165352	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Simiiformes	ANCESTRAL SPECIES	21	ENSGT00940000165352	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00550000076258	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00520000058758.g	ENSGT00390000012976.c.b.a	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00550000076258	ENSGT00620000089250 #30	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00390000012976.c.b.a.a.a	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00860000136182	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00620000089250 #30	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293.fd #37	ENSGT00390000005410	ENSGT00390000006658.b
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00390000012976.c.b.a.a.a	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00860000136182	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00620000089250 #30	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.o.b ##35	ENSGT00940000155218.B #36	ENSGT00390000006293.fd #37	ENSGT00390000005410	ENSGT00390000006658.b
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00390000012976.c.b.a.a.a	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00860000136182	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00620000089250 #30	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.p ##35	ENSGT00390000009212.o.b ##35	ENSGT00940000155218.B #36	ENSGT00390000006293.fd #37	ENSGT00390000005410
Macaca	ANCESTRAL SPECIES	8	ENSGT00390000012976.c.b.a.a.a	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00860000136182	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.o.b ##35	ENSGT00940000155218.B #36	ENSGT00390000006293.fd #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Macaca_a	ANCESTRAL SPECIES	14	ENSGT00940000157674	ENSGT00940000164262	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00620000089250 #30	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.o.b ##35	ENSGT00940000155218.B #36	ENSGT00390000006293.fd #37	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Crab-eating macaque	MODERN SPECIES	12	SYCE1L (ENSMFAG00000031480) #7	ADAMTS18 (ENSMFAG00000003786) #8	NUDT7 (ENSMFAG00000000905) #9	VAT1L (ENSMFAG00000034237) #10	CLEC3A (ENSMFAG00000050540) #11	WWOX (ENSMFAG00000037127) #12	ENSMFAG00000054515 #13	ENSMFAG00000055442 #14	ENSMFAG00000061675 #15	MAF (ENSMFAG00000064321) #16	ENSMFAG00000059854 #17	DYNLRB2 (ENSMFAG00000029001) #18	CDYL2 (ENSMFAG00000039809) #19	CMC2 (ENSMFAG00000030783) #20	CENPN (ENSMFAG00000032373) #21	ATMIN (ENSMFAG00000035738) #22	C16orf46 (ENSMFAG00000041497) #23	ENSMFAG00000041821 #24	PKD1L2 (ENSMFAG00000044240) #25	ENSMFAG00000057739 #26	BCO1 (ENSMFAG00000035655) #27	GAN (ENSMFAG00000033724) #28	CMIP (ENSMFAG00000035465) #29	ENSMFAG00000054241 #30	ENSMFAG00000054000 #31	PLCG2 (ENSMFAG00000042565) #32	SDR42E1 (ENSMFAG00000040108) #33	HSD17B2 (ENSMFAG00000002586) #34	MPHOSPH6 (ENSMFAG00000002729) #35	CDH13 (ENSMFAG00000003153) #36	HSBP1 (ENSMFAG00000000302) #37
Rhesus	MODERN SPECIES	12	CLEC3A (ENSMMUG00000051335) #11	WWOX (ENSMMUG00000010610) #12	ENSMMUG00000041596	ENSMMUG00000055251	ENSMMUG00000053231 ##31	ENSMMUG00000051334 ##14	MAF (ENSMMUG00000037756) #16	ENSMMUG00000002246	DYNLRB2 (ENSMMUG00000001907) #18	CDYL2 (ENSMMUG00000011847) #19	ENSMMUG00000064571	ENSMMUG00000065089	ENSMMUG00000052945	CENPN (ENSMMUG00000013082) #21	GCSH (ENSMMUG00000013088) ##24	ATMIN (ENSMMUG00000013086) #22	C20H16orf46 (ENSMMUG00000013087) #23	ENSMMUG00000003662 #25	BCO1 (ENSMMUG00000047071) #27	GAN (ENSMMUG00000015029) #28	CMIP (ENSMMUG00000041581) #29	ENSMMUG00000053124 #30	PLCG2 (ENSMMUG00000005334) #32	ENSMMUG00000062047 ##14	SDR42E1 (ENSMMUG00000020372) #33	HSD17B2 (ENSMMUG00000037580) #34	MPHOSPH6 (ENSMMUG00000022575) ##35	CDH13 (ENSMMUG00000020114) #36	HSBP1 (ENSMMUG00000020115) #37	OSGIN1 (ENSMMUG00000009849)	NECAB2 (ENSMMUG00000029071)
Pig-tailed macaque	MODERN SPECIES	178	CNTNAP4 (ENSMNEG00000029247)	MON1B (ENSMNEG00000037776)	SYCE1L (ENSMNEG00000033349) #7	ADAMTS18 (ENSMNEG00000031484) #8	NUDT7 (ENSMNEG00000038660) #9	VAT1L (ENSMNEG00000021232) #10	CLEC3A (ENSMNEG00000035656) #11	ENSMNEG00000037686	ENSMNEG00000035509	WWOX (ENSMNEG00000011321) #12	MAF (ENSMNEG00000037088) #16	DYNLRB2 (ENSMNEG00000041692) #18	CDYL2 (ENSMNEG00000010839) #19	CMC2 (ENSMNEG00000032151) #20	CENPN (ENSMNEG00000037652) #21	ATMIN (ENSMNEG00000040533) #22	C16orf46 (ENSMNEG00000040087) #23	ENSMNEG00000032644 #24	ENSMNEG00000036656 #25	BCO1 (ENSMNEG00000039611) #27	GAN (ENSMNEG00000042633) #28	ENSMNEG00000009056	ENSMNEG00000038255	ENSMNEG00000044434	CMIP (ENSMNEG00000036250) #29	PLCG2 (ENSMNEG00000014560) #32	SDR42E1 (ENSMNEG00000036201) #33	HSD17B2 (ENSMNEG00000037692) #34	MPHOSPH6 (ENSMNEG00000040998) ##35	ENSMNEG00000038514 #36
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00390000012976.c.b.a.a.a	ENSGT00940000157674	ENSGT00940000162517.k.a	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00620000089250 #30	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.p ##35	ENSGT00940000155218.B #36	ENSGT00390000006293.fd.d #37	ENSGT00390000005410	ENSGT00390000006658.b
Olive baboon	MODERN SPECIES	9	CNTNAP4 (ENSPANG00000006309)	ENSPANG00000006203	MON1B (ENSPANG00000018516)	SYCE1L (ENSPANG00000018343) #7	ADAMTS18 (ENSPANG00000011329) #8	ENSPANG00000038009	NUDT7 (ENSPANG00000018935) #9	ENSPANG00000038343 ##15	VAT1L (ENSPANG00000018199) #10	CLEC3A (ENSPANG00000051229) #11	ENSPANG00000037613	WWOX (ENSPANG00000017326) #12	DYNLRB2 (ENSPANG00000021879) #18	CDYL2 (ENSPANG00000015585) #19	CMC2 (ENSPANG00000039177) #20	ATMIN (ENSPANG00000010334) #22	C16orf46 (ENSPANG00000012567) #23	ENSPANG00000001043 #24	ENSPANG00000007353 #25	BCO1 (ENSPANG00000018039) #27	GAN (ENSPANG00000008267) #28	CMIP (ENSPANG00000000893) #29	PLCG2 (ENSPANG00000021730) #32	SDR42E1 (ENSPANG00000044754) #33	HSD17B2 (ENSPANG00000024392) #34	MPHOSPH6 (ENSPANG00000019619) ##35	CDH13 (ENSPANG00000016956) #36	ENSPANG00000029444 #37	MLYCD (ENSPANG00000010882)	OSGIN1 (ENSPANG00000017404)	NECAB2 (ENSPANG00000015946)
Cercopithecinae_d	ANCESTRAL SPECIES	4	ENSGT00390000012976.c.b.a.a.a	ENSGT00940000157674	ENSGT00940000162517.k.a	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00620000089250 #30	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.p ##35	ENSGT00940000155218.B #36	ENSGT00390000006293.fd.d #37	ENSGT00390000005410	ENSGT00390000006658.b
Drill	MODERN SPECIES	1030	CPHXL (ENSMLEG00000028811)	ENSMLEG00000037780	CNTNAP4 (ENSMLEG00000029378)	ENSMLEG00000002295	MON1B (ENSMLEG00000033579)	SYCE1L (ENSMLEG00000043298) #7	ADAMTS18 (ENSMLEG00000040294) #8	NUDT7 (ENSMLEG00000044207) #9	VAT1L (ENSMLEG00000040020) #10	CLEC3A (ENSMLEG00000035474) #11	WWOX (ENSMLEG00000026450) #12	DYNLRB2 (ENSMLEG00000036024) #18	CDYL2 (ENSMLEG00000043686) #19	CMC2 (ENSMLEG00000043490) #20	CENPN (ENSMLEG00000043653) #21	ATMIN (ENSMLEG00000035981) #22	C16orf46 (ENSMLEG00000029776) #23	ENSMLEG00000026860 #25	BCO1 (ENSMLEG00000027065) #27	GAN (ENSMLEG00000037931) #28	ENSMLEG00000025440	ENSMLEG00000039722	CMIP (ENSMLEG00000041107) #29	PLCG2 (ENSMLEG00000036172) #32	SDR42E1 (ENSMLEG00000031944) #33	HSD17B2 (ENSMLEG00000033859) #34	MPHOSPH6 (ENSMLEG00000029763) ##35	ENSMLEG00000033994 #36
Sooty mangabey	MODERN SPECIES	96	ENSCATG00000038738	CNTNAP4 (ENSCATG00000034579)	MON1B (ENSCATG00000017854)	SYCE1L (ENSCATG00000040347) #7	ADAMTS18 (ENSCATG00000030919) #8	NUDT7 (ENSCATG00000031071) #9	VAT1L (ENSCATG00000037460) #10	CLEC3A (ENSCATG00000037811) #11	ENSCATG00000031630	WWOX (ENSCATG00000038357) #12	MAF (ENSCATG00000041922) #16	DYNLRB2 (ENSCATG00000036839) #18	CDYL2 (ENSCATG00000043765) #19	CMC2 (ENSCATG00000036100) #20	CENPN (ENSCATG00000033167) #21	ATMIN (ENSCATG00000041468) #22	C16orf46 (ENSCATG00000036987) #23	ENSCATG00000029678 #24	ENSCATG00000040997 #25	BCO1 (ENSCATG00000044107) #27	GAN (ENSCATG00000037337) #28	ENSCATG00000033845 #30	CMIP (ENSCATG00000015703) #29	PLCG2 (ENSCATG00000033923) #32	SDR42E1 (ENSCATG00000041320) #33	HSD17B2 (ENSCATG00000031945) #34	MPHOSPH6 (ENSCATG00000031117) ##35	ENSCATG00000034788	CDH13 (ENSCATG00000033164) #36	HSBP1 (ENSCATG00000039295) #37	MLYCD (ENSCATG00000043712)
Vervet Monkey	MODERN SPECIES	24	TERF2IP (ENSCSAG00000003658)	DUXB (ENSCSAG00000003647)	CNTNAP4 (ENSCSAG00000003642)	MON1B (ENSCSAG00000003631)	SYCE1L (ENSCSAG00000003626) #7	ADAMTS18 (ENSCSAG00000003611) #8	NUDT7 (ENSCSAG00000003596) #9	VAT1L (ENSCSAG00000003593) #10	CLEC3A (ENSCSAG00000003589) #11	WWOX (ENSCSAG00000003584) #12	ENSCSAG00000018475	DYNLRB2 (ENSCSAG00000003580) #18	CDYL2 (ENSCSAG00000003578) #19	CMC2 (ENSCSAG00000003575) #20	CENPN (ENSCSAG00000003572) #21	ATMIN (ENSCSAG00000003568) #22	C16orf46 (ENSCSAG00000003567) #23	GCSH (ENSCSAG00000003563) #24	PKD1L2 (ENSCSAG00000003536) #25	BCO1 (ENSCSAG00000003502) #27	GAN (ENSCSAG00000003492) #28	CMIP (ENSCSAG00000003464) #29	PLCG2 (ENSCSAG00000003427) #32	SDR42E1 (ENSCSAG00000003417) #33	HSD17B2 (ENSCSAG00000003413) #34	ENSCSAG00000003410 ##35	CDH13 (ENSCSAG00000003407) #36	MLYCD (ENSCSAG00000003401)	OSGIN1 (ENSCSAG00000003392)	NECAB2 (ENSCSAG00000003387)	SLC38A8 (ENSCSAG00000003381)
Rhinopithecus	ANCESTRAL SPECIES	22												ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b.i.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293.fd #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Black snub-nosed monkey	MODERN SPECIES	901													CDYL2 (ENSRBIG00000033699) #19	CMC2 (ENSRBIG00000026007) #20	CENPN (ENSRBIG00000033117) #21	ATMIN (ENSRBIG00000044219) #22	C16orf46 (ENSRBIG00000039697) #23	ENSRBIG00000000931 #24	ENSRBIG00000044415 #25	BCO1 (ENSRBIG00000019930) #27	GAN (ENSRBIG00000041752) #28	CMIP (ENSRBIG00000043971) #29	PLCG2 (ENSRBIG00000030632) #32	ENSRBIG00000041712 #33
Golden snub-nosed monkey	MODERN SPECIES	1836											ENSRROG00000044738	DYNLRB2 (ENSRROG00000034202) #18	CDYL2 (ENSRROG00000040508) #19	CMC2 (ENSRROG00000034163) #20	CENPN (ENSRROG00000006914) #21	ATMIN (ENSRROG00000040180) #22	C16orf46 (ENSRROG00000044557) #23	ENSRROG00000034467 ##24	ENSRROG00000004213	ENSRROG00000038312 #25	BCO1 (ENSRROG00000042760) #27	GAN (ENSRROG00000000822) #28	CMIP (ENSRROG00000034726) #29	PLCG2 (ENSRROG00000045090) #32	SDR42E1 (ENSRROG00000032867) #33	HSD17B2 (ENSRROG00000040362) #34	MPHOSPH6 (ENSRROG00000033784) #35
Hominoidea	DUPLICATION
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00390000012976.c.b.a	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00860000136182	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091.o #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b.l #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00620000089250 #30	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Hominidae	ANCESTRAL SPECIES	9	ENSGT00390000012976.c.b.a	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00860000136182	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091.o #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b.l #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00620000089250 #30	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	19	ENSGT00390000012976.c.b.a	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00860000136182	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091.o #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b.l #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00620000089250 #30	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Homo/Pan group	ANCESTRAL SPECIES	19	ENSGT00520000058758.g	ENSGT00390000012976.c.b.a	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091.o #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b.l #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00620000089250 #30	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Pan	ANCESTRAL SPECIES	19	ENSGT00390000012976.c.b.a	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00860000136182	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091.o #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b.l #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00620000089250 #30	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Chimpanzee	MODERN SPECIES	7	CNTNAP4 (ENSPTRG00000008367)	MON1B (ENSPTRG00000008370)	SYCE1L (ENSPTRG00000031140) #7	ADAMTS18 (ENSPTRG00000008372) #8	NUDT7 (ENSPTRG00000008373) #9	VAT1L (ENSPTRG00000008374) #10	CLEC3A (ENSPTRG00000008375) #11	WWOX (ENSPTRG00000008376) #12	ENSPTRG00000049801	ENSPTRG00000047655	MAF (ENSPTRG00000045874) #16	DYNLRB2 (ENSPTRG00000008379) #18	CDYL2 (ENSPTRG00000008380) #19	CMC2 (ENSPTRG00000008382) #20	CENPN (ENSPTRG00000008383) #21	ATMIN (ENSPTRG00000008384) #22	C16H16orf46 (ENSPTRG00000008385) #23	GCSH (ENSPTRG00000008386) #24	ENSPTRG00000043634 #25	BCO1 (ENSPTRG00000008389) #27	GAN (ENSPTRG00000008391) #28	CMIP (ENSPTRG00000008393) #29	ENSPTRG00000052311 #30	ENSPTRG00000042898	PLCG2 (ENSPTRG00000008395) #32	SDR42E1 (ENSPTRG00000008396) #33	HSD17B2 (ENSPTRG00000008397) #34	MPHOSPH6 (ENSPTRG00000008398) #35	CDH13 (ENSPTRG00000008400) #36	HSBP1 (ENSPTRG00000008401) #37	MLYCD (ENSPTRG00000008403)
Bonobo	MODERN SPECIES	7	DUXB (ENSPPAG00000028561)	ENSPPAG00000037627	CNTNAP4 (ENSPPAG00000005772)	MON1B (ENSPPAG00000030166)	SYCE1L (ENSPPAG00000040039) #7	ADAMTS18 (ENSPPAG00000003071) #8	NUDT7 (ENSPPAG00000039743) #9	VAT1L (ENSPPAG00000027927) #10	CLEC3A (ENSPPAG00000022224) #11	WWOX (ENSPPAG00000038043) #12	ENSPPAG00000020043	ENSPPAG00000025636 #18	CDYL2 (ENSPPAG00000033654) #19	ENSPPAG00000031935 #20	CENPN (ENSPPAG00000036057) #21	ENSPPAG00000017223 #22	C16orf46 (ENSPPAG00000040845) #23	ENSPPAG00000014722 ##24	ENSPPAG00000038301 #25	BCO1 (ENSPPAG00000013810) #27	GAN (ENSPPAG00000040205) #28	CMIP (ENSPPAG00000042404) #29	PLCG2 (ENSPPAG00000039636) #32	SDR42E1 (ENSPPAG00000033148) #33	HSD17B2 (ENSPPAG00000037971) #34	MPHOSPH6 (ENSPPAG00000040858) #35	CDH13 (ENSPPAG00000039487) #36	ENSPPAG00000040330 #37	MLYCD (ENSPPAG00000040926)	OSGIN1 (ENSPPAG00000026986)	NECAB2 (ENSPPAG00000019159)
Human	MODERN SPECIES	7	CNTNAP4 (ENSG00000152910)	MON1B (ENSG00000103111)	SYCE1L (ENSG00000205078) #7	ADAMTS18 (ENSG00000140873) #8	NUDT7 (ENSG00000140876) #9	VAT1L (ENSG00000171724) #10	CLEC3A (ENSG00000166509) #11	WWOX (ENSG00000186153) #12	MAF (ENSG00000178573) #16	DYNLRB2 (ENSG00000168589) #18	CDYL2 (ENSG00000166446) #19	ENSG00000286221	CMC2 (ENSG00000103121) #20	CENPN (ENSG00000166451) #21	ENSG00000284512	ATMIN (ENSG00000166454) #22	C16orf46 (ENSG00000166455) #23	ENSG00000260643	GCSH (ENSG00000140905) #24	PKD1L2 (ENSG00000166473) #25	BCO1 (ENSG00000135697) #27	GAN (ENSG00000261609) #28	CMIP (ENSG00000153815) #29	PLCG2 (ENSG00000197943) #32	SDR42E1 (ENSG00000184860) #33	HSD17B2 (ENSG00000086696) #34	MPHOSPH6 (ENSG00000135698) #35	CDH13 (ENSG00000140945) #36	HSBP1 (ENSG00000230989) #37	MLYCD (ENSG00000103150)	OSGIN1 (ENSG00000140961)
Gorilla	MODERN SPECIES	7	ENSGGOG00000023451	CNTNAP4 (ENSGGOG00000009394)	MON1B (ENSGGOG00000016471)	SYCE1L (ENSGGOG00000043044) #7	ADAMTS18 (ENSGGOG00000034890) #8	NUDT7 (ENSGGOG00000017049) #9	VAT1L (ENSGGOG00000009496) #10	CLEC3A (ENSGGOG00000009506) #11	WWOX (ENSGGOG00000042973) #12	ENSGGOG00000028287	ENSGGOG00000011454 #16	ENSGGOG00000008687 #18	CDYL2 (ENSGGOG00000006084) #19	ENSGGOG00000006740 #20	CENPN (ENSGGOG00000002868) #21	ATMIN (ENSGGOG00000013004) #22	C16orf46 (ENSGGOG00000006688) #23	GCSH (ENSGGOG00000000232) #24	ENSGGOG00000000233 #25	BCO1 (ENSGGOG00000000237) #27	GAN (ENSGGOG00000014214) #28	CMIP (ENSGGOG00000000035) #29	ENSGGOG00000025361 #30	PLCG2 (ENSGGOG00000017132) #32	SDR42E1 (ENSGGOG00000013178) #33	HSD17B2 (ENSGGOG00000016637) #34	MPHOSPH6 (ENSGGOG00000001405) #35	CDH13 (ENSGGOG00000012330) #36	ENSGGOG00000036564 #37	MLYCD (ENSGGOG00000008007)	SLC38A8 (ENSGGOG00000003919)
Orangutan	MODERN SPECIES	7	ENSPPYG00000036122	CNTNAP4 (ENSPPYG00000007569)	MON1B (ENSPPYG00000007570)	SYCE1L (ENSPPYG00000007571) #7	ADAMTS18 (ENSPPYG00000007572) #8	NUDT7 (ENSPPYG00000007573) #9	VAT1L (ENSPPYG00000007574) #10	CLEC3A (ENSPPYG00000007575) #11	WWOX (ENSPPYG00000007576) #12	ENSPPYG00000007577	MAF (ENSPPYG00000041151) #16	ENSPPYG00000007579 #18	CDYL2 (ENSPPYG00000007580) #19	ENSPPYG00000007581	CENPN (ENSPPYG00000007582) #21	ATMIN (ENSPPYG00000007583) #22	C16orf46 (ENSPPYG00000007584) #23	GCSH (ENSPPYG00000007585) #24	ENSPPYG00000007586 #25	BCO1 (ENSPPYG00000007587) #27	GAN (ENSPPYG00000007588) #28	CMIP (ENSPPYG00000007738) #29	PLCG2 (ENSPPYG00000007589) #32	SDR42E1 (ENSPPYG00000007590) #33	HSD17B2 (ENSPPYG00000007591) #34	MPHOSPH6 (ENSPPYG00000007592) #35	CDH13 (ENSPPYG00000007593) #36	HSBP1 (ENSPPYG00000041045) #37	MLYCD (ENSPPYG00000007594)	OSGIN1 (ENSPPYG00000007595)	NECAB2 (ENSPPYG00000007596)
Gibbon	MODERN SPECIES	11	CPHXL (ENSNLEG00000032281)	ENSNLEG00000033037	CNTNAP4 (ENSNLEG00000013100)	MON1B (ENSNLEG00000013161)	ADAMTS18 (ENSNLEG00000013176) #8	NUDT7 (ENSNLEG00000013280) #9	VAT1L (ENSNLEG00000013285) #10	CLEC3A (ENSNLEG00000030222) #11	WWOX (ENSNLEG00000013308) #12	ENSNLEG00000030521	MAF (ENSNLEG00000010420) #16	ENSNLEG00000010422 #18	CDYL2 (ENSNLEG00000010424) #19	ENSNLEG00000010438 #20	CENPN (ENSNLEG00000010442) #21	ATMIN (ENSNLEG00000029083) #22	C16orf46 (ENSNLEG00000035295) #23	GCSH (ENSNLEG00000035315) #24	ENSNLEG00000010482 #25	BCO1 (ENSNLEG00000010612) #27	GAN (ENSNLEG00000010617) #28	ENSNLEG00000010677	CMIP (ENSNLEG00000010663) #29	PLCG2 (ENSNLEG00000010678) #32	SDR42E1 (ENSNLEG00000010695) #33	HSD17B2 (ENSNLEG00000010702) #34	MPHOSPH6 (ENSNLEG00000010725) #35	CDH13 (ENSNLEG00000010747) #36	HSBP1 (ENSNLEG00000035650) #37	MLYCD (ENSNLEG00000029910)	ENSNLEG00000010850
Hominoidea	ANCESTRAL SPECIES	19										ENSGT00910000147621	ENSGT00950000182894.B	ENSGT00390000015513.a.a.b	ENSGT00390000015513.a.a.a	ENSGT00940000155211	ENSGT00390000016390	ENSGT00390000013091.p #22	ENSGT00940000159011	ENSGT00940000163752	ENSGT00490000044166	ENSGT00940000161328	ENSGT00940000160266	ENSGT00940000160237	ENSGT00670000098074	ENSGT00520000055591.b	ENSGT00940000155950.g.a	ENSGT00510000048363	ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a	ENSGT00940000153505.a.b.b	ENSGT00940000163051	ENSGT00940000154367.a	ENSGT00940000163510.D
Hominidae	ANCESTRAL SPECIES	10	ENSGT00940000157161.b	ENSGT00530000063168.a.b	ENSGT00390000001747	ENSGT00530000063168.a.a.a	ENSGT00910000148179	ENSGT00940000158148	ENSGT00940000160218	ENSGT00390000004113	ENSGT00940000163169	ENSGT00410000025793.b.t	ENSGT00940000156081	ENSGT00390000015513.a.a.b	ENSGT00390000015513.a.a.a	ENSGT00940000155211	ENSGT00390000016390	ENSGT00390000013091.p #22	ENSGT00940000159011	ENSGT00940000161328	ENSGT00940000163752	ENSGT00940000160266	ENSGT00940000160237	ENSGT00670000098074	ENSGT00520000055591.b	ENSGT00940000155950.g.a	ENSGT00510000048363	ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a	ENSGT00940000153505.a.b.b	ENSGT00940000163051	ENSGT00940000154367.a	ENSGT00940000163510.D	ENSGT00940000153246.a.a.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT00940000157161.b	ENSGT00530000063168.a.b	ENSGT00390000001747	ENSGT00530000063168.a.a.a	ENSGT00910000148179	ENSGT00940000158148.n	ENSGT00940000160218	ENSGT00390000004113	ENSGT00940000163169	ENSGT00410000025793.b.t	ENSGT00940000156081	ENSGT00390000015513.a.a.b	ENSGT00390000015513.a.a.a	ENSGT00940000155211	ENSGT00390000016390	ENSGT00390000013091.p #22	ENSGT00940000159011	ENSGT00940000161328	ENSGT00940000153336.e.a.a.a.a.e	ENSGT00940000163752	ENSGT00940000160266	ENSGT00940000160237	ENSGT00670000098074	ENSGT00520000055591.b	ENSGT00940000155950.g.a	ENSGT00510000048363.h.a	ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a	ENSGT00510000048363.g	ENSGT00940000153505.a.b.b	ENSGT00940000163051	ENSGT00940000154367.a
Homo/Pan group	ANCESTRAL SPECIES	16	ENSGT00940000158892.b	ENSGT00940000157161.b	ENSGT00530000063168.a.b	ENSGT00390000001747	ENSGT00530000063168.a.a.a	ENSGT00940000158148.n	ENSGT00940000160218	ENSGT00390000004113	ENSGT00940000163169	ENSGT00410000025793.b.t	ENSGT00940000156081	ENSGT00390000015513.a.a.b	ENSGT00390000015513.a.a.a	ENSGT00940000155211	ENSGT00390000016390	ENSGT00390000013091.p #22	ENSGT00940000159011	ENSGT00940000161328	ENSGT00940000153336.e.a.a.a.a.e	ENSGT00940000163752	ENSGT00940000160266	ENSGT00940000160237	ENSGT00670000098074	ENSGT00520000055591.b	ENSGT00940000155950.g.a	ENSGT00510000048363.g	ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a	ENSGT00940000153505.a.b.b	ENSGT00940000163051	ENSGT00940000154367.a	ENSGT00940000163510.D
Pan	ANCESTRAL SPECIES	18	ENSGT00940000158892.b	ENSGT00940000157161.b	ENSGT00530000063168.a.b	ENSGT00390000001747	ENSGT00530000063168.a.a.a	ENSGT00940000158148.n	ENSGT00940000160218	ENSGT00390000004113	ENSGT00940000163169	ENSGT00410000025793.b.t	ENSGT00940000156081	ENSGT00390000015513.a.a.b	ENSGT00390000015513.a.a.a	ENSGT00940000155211	ENSGT00390000016390	ENSGT00390000013091.p #22	ENSGT00940000159011	ENSGT00940000161328	ENSGT00940000153336.e.a.a.a.a.e	ENSGT00940000160266	ENSGT00940000160237	ENSGT00670000098074	ENSGT00520000055591.b	ENSGT00940000155950.g.a	ENSGT00510000048363.g	ENSGT00940000155950.g.b.c	ENSGT00510000048363.h.a	ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a	ENSGT00940000153505.a.b.b	ENSGT00940000163051	ENSGT00940000154367.a
Chimpanzee	MODERN SPECIES	22	NINJ1 (ENSPTRG00000021124)	WNK2 (ENSPTRG00000044172)	FAM120A2P (ENSPTRG00000029217)	FAM120AOS (ENSPTRG00000049688)	FAM120A (ENSPTRG00000021127)	PHF2 (ENSPTRG00000021128)	BARX1 (ENSPTRG00000021129)	PTPDC1 (ENSPTRG00000021130)	ZNF169 (ENSPTRG00000021131)	ENSPTRG00000041325	MFSD14B (ENSPTRG00000021134)	FBP2 (ENSPTRG00000021136)	FBP1 (ENSPTRG00000021138)	AOPEP (ENSPTRG00000021139)	FANCC (ENSPTRG00000021140)	ENSPTRG00000039664 #22	ENSPTRG00000049213	PTCH1 (ENSPTRG00000046951)	ERCC6L2 (ENSPTRG00000048689)	ENSPTRG00000043521	HSD17B3 (ENSPTRG00000021150)	SLC35D2 (ENSPTRG00000021151)	ZNF367 (ENSPTRG00000021153)	ENSPTRG00000046335	HABP4 (ENSPTRG00000021154)	CDC14B (ENSPTRG00000021155)	PRXL2C (ENSPTRG00000021156)	ENSPTRG00000044248	ZNF510 (ENSPTRG00000023307)	ZNF782 (ENSPTRG00000021157)	ENSPTRG00000021132
Bonobo	MODERN SPECIES	22	CARD19 (ENSPPAG00000033925)	NINJ1 (ENSPPAG00000036288)	WNK2 (ENSPPAG00000041184)	ENSPPAG00000040654	FAM120AOS (ENSPPAG00000036180)	FAM120A (ENSPPAG00000010221)	PHF2 (ENSPPAG00000038271)	ENSPPAG00000028799	PTPDC1 (ENSPPAG00000036709)	ZNF169 (ENSPPAG00000037304)	MFSD14B (ENSPPAG00000025011)	FBP2 (ENSPPAG00000034055)	FBP1 (ENSPPAG00000042827)	AOPEP (ENSPPAG00000028823)	FANCC (ENSPPAG00000037232)	ENSPPAG00000033158 #22	PTCH1 (ENSPPAG00000042033)	ENSPPAG00000035061	ENSPPAG00000042252	HSD17B3 (ENSPPAG00000040278)	ENSPPAG00000039175	ZNF367 (ENSPPAG00000035864)	HABP4 (ENSPPAG00000031320)	ENSPPAG00000039845	ENSPPAG00000038888	ENSPPAG00000033645	ZNF510 (ENSPPAG00000038934)	ZNF782 (ENSPPAG00000040069)	CTSV (ENSPPAG00000041013)	ENSPPAG00000033776	CCDC180 (ENSPPAG00000009246)
Gorilla	MODERN SPECIES	22	FAM120A (ENSGGOG00000003353)	ENSGGOG00000040022	PHF2 (ENSGGOG00000004414)	BARX1 (ENSGGOG00000010464)	ENSGGOG00000012440	ENSGGOG00000024707	ENSGGOG00000027871	ZNF169 (ENSGGOG00000025313)	ENSGGOG00000009983	ENSGGOG00000008048	MFSD14B (ENSGGOG00000008483)	FBP2 (ENSGGOG00000005665)	FBP1 (ENSGGOG00000005671)	AOPEP (ENSGGOG00000005975)	FANCC (ENSGGOG00000005983)	ENSGGOG00000040052 #22	PTCH1 (ENSGGOG00000008123)	ENSGGOG00000002705	ENSGGOG00000004382	HSD17B3 (ENSGGOG00000002825)	SLC35D2 (ENSGGOG00000007499)	ZNF367 (ENSGGOG00000012699)	HABP4 (ENSGGOG00000012317)	CDC14B (ENSGGOG00000008986)	ENSGGOG00000036718	ZNF510 (ENSGGOG00000002140)	ZNF782 (ENSGGOG00000013745)	CTSV (ENSGGOG00000024642)	ENSGGOG00000041208	ENSGGOG00000025728	CCDC180 (ENSGGOG00000012429)
Gibbon	MODERN SPECIES	10	ENSNLEG00000035210	PTPDC1 (ENSNLEG00000016629)	ENSNLEG00000036255	ZNF169 (ENSNLEG00000016651)	ENSNLEG00000030528	MFSD14B (ENSNLEG00000016654)	ENSNLEG00000035369	ENSNLEG00000016673	ENSNLEG00000034642	ENSNLEG00000032096	TEKT4 (ENSNLEG00000016708)	FBP2 (ENSNLEG00000016721)	FBP1 (ENSNLEG00000016727)	AOPEP (ENSNLEG00000016734)	FANCC (ENSNLEG00000016749)	ENSNLEG00000010465 #22	PTCH1 (ENSNLEG00000016755)	ENSNLEG00000032943	ENSNLEG00000016784	HSD17B3 (ENSNLEG00000032342)	SLC35D2 (ENSNLEG00000016807)	ENSNLEG00000016813	ENSNLEG00000029121	HABP4 (ENSNLEG00000016819)	CDC14B (ENSNLEG00000016822)	PRXL2C (ENSNLEG00000036194)	ENSNLEG00000027861	ZNF510 (ENSNLEG00000016838)	ZNF782 (ENSNLEG00000016845)	ENSNLEG00000018342	CTSV (ENSNLEG00000016847)
Platyrrhini	DUPLICATION
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00390000013091.q.a #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00390000013091.q.a #22
Cebidae_a	ANCESTRAL SPECIES	12	ENSGT00390000011725.d	ENSGT00940000153655.A.b	ENSGT00940000159812	ENSGT00940000162644	ENSGT00850000132319.a.a.a	ENSGT00940000155877.i.a.b	ENSGT00440000037505.a	ENSGT01060000248589.B	ENSGT01060000248592.D	ENSGT01060000248592.B	ENSGT01060000248592.E	ENSGT00940000158290	ENSGT00940000161405	ENSGT00940000155975	ENSGT01030000234621.A	ENSGT00390000013091.q.a #22	ENSGT00950000182897.B.a.a	ENSGT01030000234621.B	ENSGT00940000160283	ENSGT01030000234571.a.a	ENSGT00940000156903	ENSGT00390000003715	ENSGT00940000156745	ENSGT00940000166505	ENSGT00940000153773.a.a.b.c.a	ENSGT00940000157185	ENSGT00390000004493	ENSGT00940000154019.a	ENSGT00390000006591.d	ENSGT00940000156760	ENSGT00390000000970.b.n.a.b
Capuchin	MODERN SPECIES	25	SELENOT (ENSCCAG00000018531)	ENSCCAG00000018164	ERICH6 (ENSCCAG00000028850)	SIAH2 (ENSCCAG00000032110)	MINDY4B (ENSCCAG00000001023)	CLRN1 (ENSCCAG00000020009)	MED12L (ENSCCAG00000038021)	GPR171 (ENSCCAG00000004527)	GPR87 (ENSCCAG00000029287)	P2RY13 (ENSCCAG00000026652)	P2RY12 (ENSCCAG00000001489)	IGSF10 (ENSCCAG00000022669)	AADACL2 (ENSCCAG00000030862)	AADAC (ENSCCAG00000029588)	SUCNR1 (ENSCCAG00000036210)	ENSCCAG00000033295 #22	MBNL1 (ENSCCAG00000036732)	P2RY1 (ENSCCAG00000001488)	RAP2B (ENSCCAG00000019904)	ENSCCAG00000030504	ENSCCAG00000028759	ARHGEF26 (ENSCCAG00000025030)	DHX36 (ENSCCAG00000035199)	GPR149 (ENSCCAG00000037844)	MME (ENSCCAG00000033778)	STRIT1 (ENSCCAG00000034361)	ENSCCAG00000028512	PLCH1 (ENSCCAG00000027178)	C3orf33 (ENSCCAG00000020896)	SLC33A1 (ENSCCAG00000036825)	ENSCCAG00000031267
Bolivian squirrel monkey	MODERN SPECIES	54	ERICH6 (ENSSBOG00000033438)	SIAH2 (ENSSBOG00000025717)	MINDY4B (ENSSBOG00000021253)	CLRN1 (ENSSBOG00000029016)	ENSSBOG00000035099	GPR171 (ENSSBOG00000009570)	GPR87 (ENSSBOG00000025278)	P2RY13 (ENSSBOG00000026950)	P2RY12 (ENSSBOG00000008981)	MED12L (ENSSBOG00000034783)	IGSF10 (ENSSBOG00000022507)	ENSSBOG00000024512	AADACL2 (ENSSBOG00000029261)	AADAC (ENSSBOG00000018433)	SUCNR1 (ENSSBOG00000035745)	ENSSBOG00000036049 #22	MBNL1 (ENSSBOG00000020980)	P2RY1 (ENSSBOG00000017142)	RAP2B (ENSSBOG00000010993)	ARHGEF26 (ENSSBOG00000019075)	DHX36 (ENSSBOG00000024666)	ENSSBOG00000014186	GPR149 (ENSSBOG00000019206)	MME (ENSSBOG00000016144)	ENSSBOG00000028023	STRIT1 (ENSSBOG00000010194)	ENSSBOG00000005590	PLCH1 (ENSSBOG00000035699)	C3orf33 (ENSSBOG00000022745)	SLC33A1 (ENSSBOG00000022127)	GMPS (ENSSBOG00000033046)
Mas night monkey	MODERN SPECIES	401	SIAH2 (ENSANAG00000016748)	MINDY4B (ENSANAG00000038244)	CLRN1 (ENSANAG00000036741)	ENSANAG00000022057	ENSANAG00000031186	GPR171 (ENSANAG00000017383)	GPR87 (ENSANAG00000019565)	P2RY13 (ENSANAG00000038036)	P2RY12 (ENSANAG00000018631)	MED12L (ENSANAG00000029382)	IGSF10 (ENSANAG00000030658)	AADACL2 (ENSANAG00000027707)	AADAC (ENSANAG00000036921)	SUCNR1 (ENSANAG00000037486)	ENSANAG00000036831	ENSANAG00000015250 #22	MBNL1 (ENSANAG00000028111)	ENSANAG00000001399	P2RY1 (ENSANAG00000010368)	RAP2B (ENSANAG00000006728)	ENSANAG00000036489	ENSANAG00000026217	ENSANAG00000035507	DHX36 (ENSANAG00000020741)	GPR149 (ENSANAG00000037941)	ENSANAG00000030491	ENSANAG00000027891	MME (ENSANAG00000023570)
Platyrrhini	ANCESTRAL SPECIES	87																ENSGT00390000013091.q.b #22	ENSGT00390000005823	ENSGT00950000183008.a.b.d
Cebidae	ANCESTRAL SPECIES	82																ENSGT00390000013091.q.b #22	ENSGT00390000005823	ENSGT00950000183008.a.b.d
Cebidae_a	ANCESTRAL SPECIES	170																ENSGT00390000013091.q.b #22	ENSGT00390000005823	ENSGT00950000183008.a.b.d
Capuchin	MODERN SPECIES	56																ENSCCAG00000037877 #22	C3orf80 (ENSCCAG00000019682)	ENSCCAG00000038113	ENSCCAG00000027393	TRHR (ENSCCAG00000031514)	ENSCCAG00000024886	EIF3E (ENSCCAG00000026961)	RSPO2 (ENSCCAG00000018637)	ANGPT1 (ENSCCAG00000022543)	ABRA (ENSCCAG00000024449)	OXR1 (ENSCCAG00000028865)	ZFPM2 (ENSCCAG00000031529)	LRP12 (ENSCCAG00000022730)	DPYS (ENSCCAG00000031986)	DCSTAMP (ENSCCAG00000021560)	ENSCCAG00000034487
Bolivian squirrel monkey	MODERN SPECIES	54	PTX3 (ENSSBOG00000030163)	VEPH1 (ENSSBOG00000027631)	ENSSBOG00000021272	SHOX2 (ENSSBOG00000035166)	RSRC1 (ENSSBOG00000027990)	MLF1 (ENSSBOG00000024403)	LXN (ENSSBOG00000034211)	GFM1 (ENSSBOG00000023252)	RARRES1 (ENSSBOG00000032081)	ENSSBOG00000026376	MFSD1 (ENSSBOG00000031153)	IQCJ (ENSSBOG00000013244)	ENSSBOG00000031233	ENSSBOG00000021868	IL12A (ENSSBOG00000034138)	ENSSBOG00000032637 #22	IFT80 (ENSSBOG00000032172)	ENSSBOG00000029510	ENSSBOG00000022707	KPNA4 (ENSSBOG00000033918)	OR2B3 (ENSSBOG00000020382)	PPM1L (ENSSBOG00000023959)	NMD3 (ENSSBOG00000024021)	SPTSSB (ENSSBOG00000019607)	ENSSBOG00000030988	OTOL1 (ENSSBOG00000028845)	SI (ENSSBOG00000025982)	SLITRK3 (ENSSBOG00000005267)	BCHE (ENSSBOG00000014953)	ZBBX (ENSSBOG00000035563)	SERPINI2 (ENSSBOG00000025243)
Mas night monkey	MODERN SPECIES	400	ENSANAG00000036049	SHOX2 (ENSANAG00000013863)	ENSANAG00000029278	MLF1 (ENSANAG00000026540)	LXN (ENSANAG00000024771)	GFM1 (ENSANAG00000035983)	RARRES1 (ENSANAG00000027312)	MFSD1 (ENSANAG00000024294)	ENSANAG00000025825	ENSANAG00000021265	ENSANAG00000021216	ENSANAG00000018582	ENSANAG00000000056	IL12A (ENSANAG00000028740)	ENSANAG00000037662	ENSANAG00000029587 #22	C3orf80 (ENSANAG00000016866)	ENSANAG00000031841	IFT80 (ENSANAG00000027523)	ENSANAG00000034080	KPNA4 (ENSANAG00000027947)	PPM1L (ENSANAG00000035681)	NMD3 (ENSANAG00000026434)	SPTSSB (ENSANAG00000019578)	ENSANAG00000035210	OTOL1 (ENSANAG00000027787)	SI (ENSANAG00000031042)	SLITRK3 (ENSANAG00000018554)	BCHE (ENSANAG00000019984)
Platyrrhini	ANCESTRAL SPECIES	21	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00940000159769.b.d	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091.r #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00550000076258	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.m.a #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Cebidae	ANCESTRAL SPECIES	21	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00940000159769.b.d	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738.b #21	ENSGT00390000013091.r #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.m.a #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Cebidae_a	ANCESTRAL SPECIES	51			ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00940000159769.b.d	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738.b #21	ENSGT00390000013091.r #22	ENSGT00390000017224 #23	ENSGT00390000011666.x.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.m.a #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Bolivian squirrel monkey	DUPLICATION
Bolivian squirrel monkey	MODERN SPECIES	137			MON1B (ENSSBOG00000035530)	SYCE1L (ENSSBOG00000020303) #7	ADAMTS18 (ENSSBOG00000017634) #8	NUDT7 (ENSSBOG00000031725) #9	VAT1L (ENSSBOG00000021201) #10	CLEC3A (ENSSBOG00000014185) #11	WWOX (ENSSBOG00000029958) #12	ENSSBOG00000033059	DYNLRB2 (ENSSBOG00000033490) #18	CDYL2 (ENSSBOG00000023679) #19	ENSSBOG00000020281	CMC2 (ENSSBOG00000026454) #20	ENSSBOG00000023971 #21	ENSSBOG00000020729 #22	C16orf46 (ENSSBOG00000029905) #23	ENSSBOG00000028280 ##24	ENSSBOG00000023334 #25	BCO1 (ENSSBOG00000014568) #27	GAN (ENSSBOG00000024113) #28	CMIP (ENSSBOG00000003467) #29	PLCG2 (ENSSBOG00000026469) #32	SDR42E1 (ENSSBOG00000034896) #33	HSD17B2 (ENSSBOG00000033511) #34	ENSSBOG00000031580 #35	CDH13 (ENSSBOG00000019920) #36	HSBP1 (ENSSBOG00000027265) #37	ENSSBOG00000026816	MAP4K4 (ENSSBOG00000028082)	RFX8 (ENSSBOG00000019961)
Bolivian squirrel monkey	MODERN SPECIES	46	PSMD14 (ENSSBOG00000023531)	TANK (ENSSBOG00000031963)	ENSSBOG00000028896	ENSSBOG00000034705	ITGB6 (ENSSBOG00000029531)	PLA2R1 (ENSSBOG00000009898)	LY75 (ENSSBOG00000033492)	CD302 (ENSSBOG00000027733)	MARCHF7 (ENSSBOG00000027159)	BAZ2B (ENSSBOG00000028235)	WDSUB1 (ENSSBOG00000022704)	TANC1 (ENSSBOG00000035294)	ENSSBOG00000020626	PKP4 (ENSSBOG00000035588)	CCDC148 (ENSSBOG00000028768)	ENSSBOG00000018918 #22	UPP2 (ENSSBOG00000025379)	ENSSBOG00000005244	ACVR1 (ENSSBOG00000025226)	ACVR1C (ENSSBOG00000030313)	ENSSBOG00000035700	CYTIP (ENSSBOG00000025520)	ENSSBOG00000028587	ERMN (ENSSBOG00000031955)	GALNT5 (ENSSBOG00000020422)	ENSSBOG00000023257	ENSSBOG00000027281	NR4A2 (ENSSBOG00000021402)	KCNJ3 (ENSSBOG00000023474)	ENSSBOG00000030750	GALNT13 (ENSSBOG00000024917)
Capuchin	MODERN SPECIES	137		MON1B (ENSCCAG00000022286)	SYCE1L (ENSCCAG00000027535) #7	ADAMTS18 (ENSCCAG00000020385) #8	NUDT7 (ENSCCAG00000016819) #9	VAT1L (ENSCCAG00000029888) #10	CLEC3A (ENSCCAG00000018795) #11	WWOX (ENSCCAG00000033057) #12	ENSCCAG00000020493	MAF (ENSCCAG00000033131) #16	ENSCCAG00000023113	DYNLRB2 (ENSCCAG00000023094) #18	CDYL2 (ENSCCAG00000029391) #19	CMC2 (ENSCCAG00000019738) #20	CENPN (ENSCCAG00000025012) #21	ENSCCAG00000001760 #22	C16orf46 (ENSCCAG00000023525) #23	ENSCCAG00000031393 #24	PKD1L2 (ENSCCAG00000037509) #25	BCO1 (ENSCCAG00000033122) #27	GAN (ENSCCAG00000016849) #28	CMIP (ENSCCAG00000024316) #29	PLCG2 (ENSCCAG00000020986) #32	SDR42E1 (ENSCCAG00000037533) #33	HSD17B2 (ENSCCAG00000015333) #34	ENSCCAG00000022557 #35
Marmoset	MODERN SPECIES	12	ENSCJAG00000078953	MON1B (ENSCJAG00000014113)	SYCE1L (ENSCJAG00000014101) #7	ADAMTS18 (ENSCJAG00000014053) #8	NUDT7 (ENSCJAG00000043913) #9	VAT1L (ENSCJAG00000014046) #10	CLEC3A (ENSCJAG00000039841) #11	WWOX (ENSCJAG00000014032) #12	MAF (ENSCJAG00000041654) #16	ENSCJAG00000084007	ENSCJAG00000080145	DYNLRB2 (ENSCJAG00000016709) #18	CDYL2 (ENSCJAG00000016685) #19	CMC2 (ENSCJAG00000072359) #20	CENPN (ENSCJAG00000016673) #21	ATMIN (ENSCJAG00000016670) #22	C16orf46 (ENSCJAG00000016662) #23	ENSCJAG00000083289 #24	ENSCJAG00000016609 #25	BCO1 (ENSCJAG00000077714) #27	GAN (ENSCJAG00000016571) #28	CMIP (ENSCJAG00000016538) #29	ENSCJAG00000080065	PLCG2 (ENSCJAG00000016515) #32	SDR42E1 (ENSCJAG00000054745) #33	HSD17B2 (ENSCJAG00000016505) #34	MPHOSPH6 (ENSCJAG00000016498) #35	CDH13 (ENSCJAG00000008343) #36	HSBP1 (ENSCJAG00000047707) #37	MLYCD (ENSCJAG00000000633)	OSGIN1 (ENSCJAG00000083606)
Mas night monkey	MODERN SPECIES	517											MAF (ENSANAG00000034156) #16	ENSANAG00000037239	DYNLRB2 (ENSANAG00000037742) #18	CDYL2 (ENSANAG00000021651) #19	CMC2 (ENSANAG00000023151) #20	ENSANAG00000032681 #22	C16orf46 (ENSANAG00000033425) #23	ENSANAG00000022292 ##24	ENSANAG00000025943 #25	BCO1 (ENSANAG00000031210) #27	GAN (ENSANAG00000033975) #28	ENSANAG00000033422	CMIP (ENSANAG00000021925) #29	PLCG2 (ENSANAG00000025033) #32	SDR42E1 (ENSANAG00000030613) #33	HSD17B2 (ENSANAG00000036673) #34	ENSANAG00000034555 #35	CDH13 (ENSANAG00000028622) #36	HSBP1 (ENSANAG00000038047) #37	MLYCD (ENSANAG00000033161)	OSGIN1 (ENSANAG00000010277)
Tarsier	MODERN SPECIES	5652												DYNLRB2 (ENSTSYG00000007776) #18	CDYL2 (ENSTSYG00000011469) #19	CMC2 (ENSTSYG00000007059) #20	CENPN (ENSTSYG00000002871) #21	ATMIN (ENSTSYG00000036649) #22	C16orf46 (ENSTSYG00000035549) #23	ENSTSYG00000000248 #24	ENSTSYG00000026897 #25	BCO1 (ENSTSYG00000009405) #27	GAN (ENSTSYG00000036909) #28	CMIP (ENSTSYG00000028001) #29	PLCG2 (ENSTSYG00000014024) #32	SDR42E1 (ENSTSYG00000013803) #33	HSD17B2 (ENSTSYG00000013598) #34
Strepsirrhini	ANCESTRAL SPECIES	17	ENSGT00940000165352	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000154593.b	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.`b.a #24	ENSGT00990000204256	ENSGT00390000011666.`b.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410
Lemuriformes	ANCESTRAL SPECIES	51												ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.`b.a #24	ENSGT00990000204256	ENSGT00390000011666.`b.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293.yc #37	ENSGT00390000005410
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	12	TMEM231 (ENSMICG00000011968)	ENSMICG00000037996	GABARAPL2 (ENSMICG00000037412)	ADAT1 (ENSMICG00000011987)	KARS1 (ENSMICG00000011997)	TERF2IP (ENSMICG00000041861)	DUXB (ENSMICG00000042018)	CNTNAP4 (ENSMICG00000012242)	MON1B (ENSMICG00000009221)	SYCE1L (ENSMICG00000028524) #7	ADAMTS18 (ENSMICG00000009225) #8	DYNLRB2 (ENSMICG00000000631) #18	CDYL2 (ENSMICG00000000633) #19	CMC2 (ENSMICG00000011915) #20	CENPN (ENSMICG00000011918) #21	ENSMICG00000011930 #22	C16orf46 (ENSMICG00000045406) #23	ENSMICG00000045290 #24	ENSMICG00000011945 #25	BCO1 (ENSMICG00000014945) #27	GAN (ENSMICG00000014957) #28	MAF (ENSMICG00000043372) #16	WWOX (ENSMICG00000029194) #12	CLEC3A (ENSMICG00000047455) #11	VAT1L (ENSMICG00000009243) #10	ENSMICG00000041836 #8	NUDT7 (ENSMICG00000031936) #9	ADGRG5 (ENSMICG00000031680)	CCDC102A (ENSMICG00000027073)	ENSMICG00000012449	ENSMICG00000041838
Mouse lemur	MODERN SPECIES	31	TTLL13 (ENSMICG00000012703)	NGRN (ENSMICG00000047039)	VPS33B (ENSMICG00000014841)	PRC1 (ENSMICG00000014826)	RCCD1 (ENSMICG00000008338)	UNC45A (ENSMICG00000008324)	HDDC3 (ENSMICG00000041559)	MAN2A2 (ENSMICG00000015397)	FES (ENSMICG00000015372)	FURIN (ENSMICG00000027223)	BLM (ENSMICG00000034442)	CRTC3 (ENSMICG00000006993)	IQGAP1 (ENSMICG00000006970)	ZNF774 (ENSMICG00000034148)	ZSCAN2 (ENSMICG00000038660)	ENSMICG00000030469 #22	WDR73 (ENSMICG00000015924)	NMB (ENSMICG00000015939)	SEC11A (ENSMICG00000015944)	ZNF592 (ENSMICG00000000763)	ALPK3 (ENSMICG00000033036)	ENSMICG00000000775	ENSMICG00000043870	PDE8A (ENSMICG00000000779)	ENSMICG00000035765	CPEB1 (ENSMICG00000026395)	AP3B2 (ENSMICG00000017195)	FSD2 (ENSMICG00000017199)	WHAMM (ENSMICG00000030573)	HOMER2 (ENSMICG00000017213)	ENSMICG00000046729
Lemuriformes_a	ANCESTRAL SPECIES	55											ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.`b.a #24	ENSGT00990000204256	ENSGT00390000011666.`b.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293.yc #37	ENSGT00390000005410
Coquerels sifaka	MODERN SPECIES	399											MAF (ENSPCOG00000020508) #16	DYNLRB2 (ENSPCOG00000028370) #18	CDYL2 (ENSPCOG00000017731) #19	ENSPCOG00000020662	CENPN (ENSPCOG00000020111) #21	ATMIN (ENSPCOG00000019245) #22	C16orf46 (ENSPCOG00000021267) #23	ENSPCOG00000016082 #24	ENSPCOG00000018154 #25	BCO1 (ENSPCOG00000011909) #27	GAN (ENSPCOG00000016506) #28	CMIP (ENSPCOG00000026783) #29	PLCG2 (ENSPCOG00000017491) #32	SDR42E1 (ENSPCOG00000024993) #33	HSD17B2 (ENSPCOG00000015807) #34	ENSPCOG00000014174 #35	CDH13 (ENSPCOG00000011394) #36	ENSPCOG00000013345	HSBP1 (ENSPCOG00000013114) #37	MLYCD (ENSPCOG00000014205)	OSGIN1 (ENSPCOG00000017513)
Greater bamboo lemur	MODERN SPECIES	420												DYNLRB2 (ENSPSMG00000005504) #18	CDYL2 (ENSPSMG00000005531) #19	CMC2 (ENSPSMG00000005556) #20	CENPN (ENSPSMG00000005594) #21	ATMIN (ENSPSMG00000005678) #22	C16orf46 (ENSPSMG00000005682) #23	ENSPSMG00000005725 #24	ENSPSMG00000005766	ENSPSMG00000005782 #25	BCO1 (ENSPSMG00000005790) #27	GAN (ENSPSMG00000005802) #28	CMIP (ENSPSMG00000005904) #29	PLCG2 (ENSPSMG00000006135) #32	SDR42E1 (ENSPSMG00000006142) #33	HSD17B2 (ENSPSMG00000006150) #34	MPHOSPH6 (ENSPSMG00000006170) #35	CDH13 (ENSPSMG00000006218) #36	ENSPSMG00000006243 #37	MLYCD (ENSPSMG00000006247)	OSGIN1 (ENSPSMG00000006253)
Bushbaby	DUPLICATION
Bushbaby	DUPLICATION
Bushbaby	MODERN SPECIES	162	KARS1 (ENSOGAG00000005903)	ENSOGAG00000005909	CNTNAP4 (ENSOGAG00000014485)	ENSOGAG00000024762	MON1B (ENSOGAG00000000955)	SYCE1L (ENSOGAG00000027541) #7	ADAMTS18 (ENSOGAG00000011951) #8	NUDT7 (ENSOGAG00000005648) #9	VAT1L (ENSOGAG00000005649) #10	CLEC3A (ENSOGAG00000005654) #11	ENSOGAG00000005657	ENSOGAG00000031340 #16	DYNLRB2 (ENSOGAG00000000907) #18	CDYL2 (ENSOGAG00000000906) #19	CENPN (ENSOGAG00000006972) #21	ENSOGAG00000029620 #22	ENSOGAG00000029585	ENSOGAG00000007967 #24	ENSOGAG00000007970 #25	BCO1 (ENSOGAG00000016237) #27	GAN (ENSOGAG00000012484) #28	CMIP (ENSOGAG00000016409) #29	PLCG2 (ENSOGAG00000006986) #32	ENSOGAG00000006999 #33	HSD17B2 (ENSOGAG00000012529) #34	MPHOSPH6 (ENSOGAG00000012532) #35	CDH13 (ENSOGAG00000009291) #36	HSBP1 (ENSOGAG00000015437) #37	MLYCD (ENSOGAG00000009296)	OSGIN1 (ENSOGAG00000034472)	NECAB2 (ENSOGAG00000009297)
Bushbaby	MODERN SPECIES	506																ENSOGAG00000032597 #22	ENSOGAG00000024352
Bushbaby	MODERN SPECIES	221	SUCLA2 (ENSOGAG00000007452)	NUDT15 (ENSOGAG00000024482)	MED4 (ENSOGAG00000007456)	ITM2B (ENSOGAG00000007459)	ENSOGAG00000033501	RB1 (ENSOGAG00000007461)	LPAR6 (ENSOGAG00000007467)	RCBTB2 (ENSOGAG00000007469)	CRYL1 (ENSOGAG00000016250)	ENSOGAG00000030885	GJB6 (ENSOGAG00000005343)	GJB2 (ENSOGAG00000011675)	GJA3 (ENSOGAG00000015365)	ZMYM2 (ENSOGAG00000015350)	ENSOGAG00000034482	ENSOGAG00000024065 #22	ENSOGAG00000032663	PSPC1 (ENSOGAG00000012643)	MPHOSPH8 (ENSOGAG00000012635)	PARP4 (ENSOGAG00000016230)	CENPJ (ENSOGAG00000014821)	RNF17 (ENSOGAG00000014803)	ATP12A (ENSOGAG00000003804)	ENSOGAG00000031608	IFT88 (ENSOGAG00000006694)	IL17D (ENSOGAG00000001196)	EEF1AKMT1 (ENSOGAG00000033563)	XPO4 (ENSOGAG00000000048)	LATS2 (ENSOGAG00000005624)	SAP18 (ENSOGAG00000010062)	SKA3 (ENSOGAG00000003206)
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Tree shrew	MODERN SPECIES	3582												DYNLRB2 (ENSTBEG00000000009) #18	CDYL2 (ENSTBEG00000000034) #19	CMC2 (ENSTBEG00000000038) #20	CENPN (ENSTBEG00000000039) #21	ATMIN (ENSTBEG00000000041) #22	C16orf46 (ENSTBEG00000000050) #23	GCSH (ENSTBEG00000000056) #24	PKD1L2 (ENSTBEG00000000066) #25	BCO1 (ENSTBEG00000000090) #27	ENSTBEG00000000096 #28
Glires	ANCESTRAL SPECIES	6	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00940000154420.B	ENSGT00940000167952	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.j #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Rodentia	ANCESTRAL SPECIES	8	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00940000154420.B	ENSGT00940000167952	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.j #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00390000005351	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.j #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Myomorpha	ANCESTRAL SPECIES	22	ENSGT00390000005351	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.j #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Muroidea	ANCESTRAL SPECIES	19	ENSGT01030000234618.A	ENSGT00390000005351	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.j #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT01030000234618.A	ENSGT00390000005351	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.j #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Cricetidae	ANCESTRAL SPECIES	7	ENSGT01030000234618.A	ENSGT00390000005351	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.j #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT01030000234618.A	ENSGT00390000005351	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.j #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Northern American deer mouse	MODERN SPECIES	18	Terf2ip (ENSPEMG00000004753)	Cntnap4 (ENSPEMG00000012271)	Mon1b (ENSPEMG00000010449)	Syce1l (ENSPEMG00000007573) #7	Adamts18 (ENSPEMG00000017721) #8	Nudt7 (ENSPEMG00000015550) #9	Vat1l (ENSPEMG00000015665) #10	Clec3a (ENSPEMG00000031227) #11	Wwox (ENSPEMG00000016944) #12	ENSPEMG00000030824	Maf (ENSPEMG00000019355) #16	Dynlrb2 (ENSPEMG00000019948) #18	Cdyl2 (ENSPEMG00000019625) #19	ENSPEMG00000020157 #20	Cenpn (ENSPEMG00000002034) #21	Atmin (ENSPEMG00000019534) #22	ENSPEMG00000011494	1700030J22Rik (ENSPEMG00000014171) #23	Gcsh (ENSPEMG00000019328) #24	Pkd1l2 (ENSPEMG00000019583) #25	Bco1 (ENSPEMG00000020066) #27	Gan (ENSPEMG00000020147) #28	Cmip (ENSPEMG00000019741) #29	Plcg2 (ENSPEMG00000018570) #32	Sdr42e1 (ENSPEMG00000029375) #33	Hsd17b2 (ENSPEMG00000016574) #34	ENSPEMG00000031107	Mphosph6 (ENSPEMG00000019756) #35	Cdh13 (ENSPEMG00000019421) #36	ENSPEMG00000030115 #37	Mlycd (ENSPEMG00000019846)
Prairie vole	MODERN SPECIES	12	Cntnap4 (ENSMOCG00000005286)	ENSMOCG00000010395	Mon1b (ENSMOCG00000003753)	Syce1l (ENSMOCG00000022883) #7	Adamts18 (ENSMOCG00000015505) #8	ENSMOCG00000010114	Nudt7 (ENSMOCG00000015530) #9	Vat1l (ENSMOCG00000018479) #10	Clec3a (ENSMOCG00000016149) #11	Wwox (ENSMOCG00000013122) #12	Maf (ENSMOCG00000017607) #16	Dynlrb2 (ENSMOCG00000016123) #18	Cdyl2 (ENSMOCG00000021578) #19	ENSMOCG00000007353 #20	Cenpn (ENSMOCG00000011952) #21	Atmin (ENSMOCG00000020741) #22	1700030J22Rik (ENSMOCG00000021044) #23	Gcsh (ENSMOCG00000000583) #24	Pkd1l2 (ENSMOCG00000017193) #25	Bco1 (ENSMOCG00000015152) #27	Gan (ENSMOCG00000022503) #28	Cmip (ENSMOCG00000009023) #29	Plcg2 (ENSMOCG00000014818) #32	Sdr42e1 (ENSMOCG00000021183) #33	Hsd17b2 (ENSMOCG00000021716) #34	ENSMOCG00000005132	Mphosph6 (ENSMOCG00000007125) #35	Cdh13 (ENSMOCG00000019245) #36	Hsbp1 (ENSMOCG00000017033) #37	Mlycd (ENSMOCG00000014323)	Osgin1 (ENSMOCG00000021893)
Cricetinae	ANCESTRAL SPECIES	16	ENSGT01030000234618.A	ENSGT00390000005351	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.j #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	112	Adamts18 (ENSCGRG00001010706) #8	ENSCGRG00001011004	ENSCGRG00001010096	Nudt7 (ENSCGRG00001016438) #9	Vat1l (ENSCGRG00001022889) #10	Clec3a (ENSCGRG00001006598) #11	ENSCGRG00001019630	ENSCGRG00001011032	ENSCGRG00001011674	Wwox (ENSCGRG00001021234) #12	Maf (ENSCGRG00001007125) #16	Dynlrb2 (ENSCGRG00001000535) #18	Cdyl2 (ENSCGRG00001021515) #19	ENSCGRG00001019915 #20	Cenpn (ENSCGRG00001022755) #21	ENSCGRG00001013048 #22	1700030J22Rik (ENSCGRG00001020202) #23	ENSCGRG00001023751 #24	ENSCGRG00001024350	Pkd1l2 (ENSCGRG00001022012) #25	Bco1 (ENSCGRG00001021072) #27	Gan (ENSCGRG00001010582) #28	Cmip (ENSCGRG00001020795) #29	Plcg2 (ENSCGRG00001019941) #32	Sdr42e1 (ENSCGRG00001011865) #33	Hsd17b2 (ENSCGRG00001014890) #34	ENSCGRG00001019665 #35	Cdh13 (ENSCGRG00001001385) #36	Hsbp1 (ENSCGRG00001016781) #37	Mlycd (ENSCGRG00001017150)	Osgin1 (ENSCGRG00001001559)
Chinese hamster chok1gshd	MODERN SPECIES	271							Ppp6c (ENSCGRG00001000312)	ENSCGRG00001005051	ENSCGRG00001000645	Zfp619 (ENSCGRG00001020374)	ENSCGRG00001022651	ENSCGRG00001011009	Vstm2b (ENSCGRG00001020469)	ENSCGRG00001017653	Pop4 (ENSCGRG00001017185)	ENSCGRG00001014372 #22	Zfp715 (ENSCGRG00001011966)	Siglecf (ENSCGRG00001009571)	Siglecg (ENSCGRG00001018242)	Gm38999 (ENSCGRG00001017564)	Lim2 (ENSCGRG00001014786)	Nkg7 (ENSCGRG00001014108)	Cldnd2 (ENSCGRG00001011312)	Etfb (ENSCGRG00001022229)	Vsig10l (ENSCGRG00001012455)	Iglon5 (ENSCGRG00001020985)	4931406B18Rik (ENSCGRG00001022577)	ENSCGRG00001020212	ENSCGRG00001018781	ENSCGRG00001017124	Siglece (ENSCGRG00001013597)
Golden Hamster	MODERN SPECIES	654	Gabarapl2 (ENSMAUG00000017141)	Adat1 (ENSMAUG00000009647)	Cntnap4 (ENSMAUG00000011098)	Mon1b (ENSMAUG00000000766)	Adamts18 (ENSMAUG00000022273) #8	ENSMAUG00000010341	ENSMAUG00000003225 #9	Vat1l (ENSMAUG00000016275) #10	Clec3a (ENSMAUG00000014441) #11	Wwox (ENSMAUG00000007520) #12	Maf (ENSMAUG00000021039) #16	Dynlrb2 (ENSMAUG00000010167) #18	Cdyl2 (ENSMAUG00000015698) #19	ENSMAUG00000011255 #20	ENSMAUG00000017433 #21	Atmin (ENSMAUG00000015374) #22	1700030J22Rik (ENSMAUG00000012382) #23	ENSMAUG00000018099 #24	Pkd1l2 (ENSMAUG00000002511) #25	Bco1 (ENSMAUG00000008009) #27	ENSMAUG00000009114 #28	Cmip (ENSMAUG00000013194) #29	Plcg2 (ENSMAUG00000007620) #32	Sdr42e1 (ENSMAUG00000001530) #33	Hsd17b2 (ENSMAUG00000017677) #34	Mphosph6 (ENSMAUG00000011107) #35	Cdh13 (ENSMAUG00000006607) #36	Hsbp1 (ENSMAUG00000014829) #37	Mlycd (ENSMAUG00000016063)	Osgin1 (ENSMAUG00000006693)	Necab2 (ENSMAUG00000001187)
Murinae	ANCESTRAL SPECIES	15	ENSGT01030000234618.A	ENSGT00390000005351	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.j #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Mus	ANCESTRAL SPECIES	6	ENSGT01030000234618.A	ENSGT00390000005351	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.j #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Mus_A	ANCESTRAL SPECIES	8	ENSGT01030000234618.A	ENSGT00390000005351	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.cb #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.j #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Mus_B	ANCESTRAL SPECIES	6	ENSGT01030000234618.A	ENSGT00390000005351	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.cb #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.j #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Mouse	MODERN SPECIES	17	Kars (ENSMUSG00000031948)	Terf2ip (ENSMUSG00000033430)	Cntnap4 (ENSMUSG00000031772)	Mon1b (ENSMUSG00000078908)	Syce1l (ENSMUSG00000033409) #7	Adamts18 (ENSMUSG00000053399) #8	Nudt7 (ENSMUSG00000031767) #9	Vat1l (ENSMUSG00000046844) #10	Clec3a (ENSMUSG00000008874) #11	Wwox (ENSMUSG00000004637) #12	Maf (ENSMUSG00000055435) #16	Dynlrb2 (ENSMUSG00000034467) #18	Cdyl2 (ENSMUSG00000031758) #19	Cmc2 (ENSMUSG00000014633)	Cenpn (ENSMUSG00000031756) #21	Atmin (ENSMUSG00000047388) #22	1700030J22Rik (ENSMUSG00000031847) #23	Gcsh (ENSMUSG00000034424) #24	Pkd1l2 (ENSMUSG00000034416) #25	Bco1 (ENSMUSG00000031845) #27	Gan (ENSMUSG00000052557) #28	Cmip (ENSMUSG00000034390) #29	Plcg2 (ENSMUSG00000034330) #32	Sdr42e1 (ENSMUSG00000034308) #33	Hsd17b2 (ENSMUSG00000031844) #34	Mphosph6 (ENSMUSG00000031843) #35	Cdh13 (ENSMUSG00000031841) #36	Hsbp1 (ENSMUSG00000031839) #37	Mlycd (ENSMUSG00000074064)	Osgin1 (ENSMUSG00000074063)	Necab2 (ENSMUSG00000031837)
Mus_C	ANCESTRAL SPECIES	5	ENSGT01030000234618.A	ENSGT00390000005351	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.cb #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.j #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Steppe mouse	MODERN SPECIES	3379	Cntnap4 (ENSMSIG00000020072)	ENSMSIG00000020146	Mon1b (ENSMSIG00000020187)	Syce1l (ENSMSIG00000020198) #7	Adamts18 (ENSMSIG00000020295) #8	ENSMSIG00000020331	Nudt7 (ENSMSIG00000020337) #9	Vat1l (ENSMSIG00000020396) #10	Clec3a (ENSMSIG00000020422) #11	Wwox (ENSMSIG00000020449) #12	ENSMSIG00000020647	Dynlrb2 (ENSMSIG00000020660) #18	Cdyl2 (ENSMSIG00000020716) #19	ENSMSIG00000020729 #20	Cenpn (ENSMSIG00000020746) #21	Atmin (ENSMSIG00000020843) #22	1700030J22Rik (ENSMSIG00000020871) #23	ENSMSIG00000020877 #24	Pkd1l2 (ENSMSIG00000020891) #25	Bco1 (ENSMSIG00000021036) #27	Gan (ENSMSIG00000021114) #28	Cmip (ENSMSIG00000021151) #29	Plcg2 (ENSMSIG00000021222) #32	Sdr42e1 (ENSMSIG00000021283) #33	ENSMSIG00000021297 #34
spretus	MODERN SPECIES	17	Kars (MGP_SPRETEiJ_G0032706)	Terf2ip (MGP_SPRETEiJ_G0032707)	Cntnap4 (MGP_SPRETEiJ_G0032708)	Mon1b (MGP_SPRETEiJ_G0032709)	Syce1l (MGP_SPRETEiJ_G0032710) #7	Adamts18 (MGP_SPRETEiJ_G0032711) #8	Nudt7 (MGP_SPRETEiJ_G0032712) #9	Vat1l (MGP_SPRETEiJ_G0032713) #10	Clec3a (MGP_SPRETEiJ_G0032714) #11	Wwox (MGP_SPRETEiJ_G0032715) #12	MGP_SPRETEiJ_G0032716 #16	Dynlrb2 (MGP_SPRETEiJ_G0032717) #18	Cdyl2 (MGP_SPRETEiJ_G0032718) #19	Cmc2 (MGP_SPRETEiJ_G0032719)	Cenpn (MGP_SPRETEiJ_G0032720) #21	Atmin (MGP_SPRETEiJ_G0032721) #22	1700030J22Rik (MGP_SPRETEiJ_G0032722) #23	Gcsh (MGP_SPRETEiJ_G0032723) #24	Pkd1l2 (MGP_SPRETEiJ_G0032724) #25	Bco1 (MGP_SPRETEiJ_G0032725) #27	Gan (MGP_SPRETEiJ_G0032726) #28	Cmip (MGP_SPRETEiJ_G0032727) #29	Plcg2 (MGP_SPRETEiJ_G0032728) #32	Sdr42e1 (MGP_SPRETEiJ_G0032729) #33	Hsd17b2 (MGP_SPRETEiJ_G0032730) #34	Mphosph6 (MGP_SPRETEiJ_G0032731) #35	Cdh13 (MGP_SPRETEiJ_G0032732) #36	Hsbp1 (MGP_SPRETEiJ_G0032733) #37	Mlycd (MGP_SPRETEiJ_G0032734)	Osgin1 (MGP_SPRETEiJ_G0032735)	Necab2 (MGP_SPRETEiJ_G0032736)
Ryukyu mouse	MODERN SPECIES	17	Kars (MGP_CAROLIEiJ_G0031588)	Terf2ip (MGP_CAROLIEiJ_G0031589)	Cntnap4 (MGP_CAROLIEiJ_G0031590)	Mon1b (MGP_CAROLIEiJ_G0031591)	Syce1l (MGP_CAROLIEiJ_G0031592) #7	Adamts18 (MGP_CAROLIEiJ_G0031593) #8	Nudt7 (MGP_CAROLIEiJ_G0031594) #9	Vat1l (MGP_CAROLIEiJ_G0031595) #10	Clec3a (MGP_CAROLIEiJ_G0031596) #11	Wwox (MGP_CAROLIEiJ_G0031597) #12	Maf (MGP_CAROLIEiJ_G0031598) #16	Dynlrb2 (MGP_CAROLIEiJ_G0031599) #18	Cdyl2 (MGP_CAROLIEiJ_G0031600) #19	Cmc2 (MGP_CAROLIEiJ_G0031601)	Cenpn (MGP_CAROLIEiJ_G0031602) #21	Atmin (MGP_CAROLIEiJ_G0031603) #22	1700030J22Rik (MGP_CAROLIEiJ_G0031604) #23	Gcsh (MGP_CAROLIEiJ_G0031605) #24	Pkd1l2 (MGP_CAROLIEiJ_G0031606) #25	Bco1 (MGP_CAROLIEiJ_G0031607) #27	Gan (MGP_CAROLIEiJ_G0031608) #28	Cmip (MGP_CAROLIEiJ_G0031609) #29	Plcg2 (MGP_CAROLIEiJ_G0031610) #32	Sdr42e1 (MGP_CAROLIEiJ_G0031611) #33	Hsd17b2 (MGP_CAROLIEiJ_G0031612) #34	Mphosph6 (MGP_CAROLIEiJ_G0031613) #35	Cdh13 (MGP_CAROLIEiJ_G0031614) #36	Hsbp1 (MGP_CAROLIEiJ_G0031615) #37	Mlycd (MGP_CAROLIEiJ_G0031616)	Osgin1 (MGP_CAROLIEiJ_G0031617)	Necab2 (MGP_CAROLIEiJ_G0031618)
Shrew mouse	MODERN SPECIES	12	Kars (MGP_PahariEiJ_G0023186)	Terf2ip (MGP_PahariEiJ_G0023187)	Cntnap4 (MGP_PahariEiJ_G0023188)	Mon1b (MGP_PahariEiJ_G0023189)	Syce1l (MGP_PahariEiJ_G0023190) #7	Adamts18 (MGP_PahariEiJ_G0023191) #8	MGP_PahariEiJ_G0023192 #9	Vat1l (MGP_PahariEiJ_G0023193) #10	Clec3a (MGP_PahariEiJ_G0023194) #11	Wwox (MGP_PahariEiJ_G0023195) #12	Maf (MGP_PahariEiJ_G0023196) #16	Dynlrb2 (MGP_PahariEiJ_G0023197) #18	Cdyl2 (MGP_PahariEiJ_G0023198) #19	Cmc2 (MGP_PahariEiJ_G0023199)	Cenpn (MGP_PahariEiJ_G0023200) #21	Atmin (MGP_PahariEiJ_G0023201) #22	1700030J22Rik (MGP_PahariEiJ_G0023202) #23	Gcsh (MGP_PahariEiJ_G0023203) #24	Pkd1l2 (MGP_PahariEiJ_G0023204) #25	Bco1 (MGP_PahariEiJ_G0023205) #27	Gan (MGP_PahariEiJ_G0023206) #28	Cmip (MGP_PahariEiJ_G0023207) #29	Plcg2 (MGP_PahariEiJ_G0023208) #32	Sdr42e1 (MGP_PahariEiJ_G0023209) #33	Hsd17b2 (MGP_PahariEiJ_G0023210) #34	Mphosph6 (MGP_PahariEiJ_G0023211) #35	Cdh13 (MGP_PahariEiJ_G0023212) #36	Hsbp1 (MGP_PahariEiJ_G0023213) #37	Mlycd (MGP_PahariEiJ_G0023214)	Osgin1 (MGP_PahariEiJ_G0023215)	Necab2 (MGP_PahariEiJ_G0023216)
Rat	MODERN SPECIES	10	AC126899.1 (ENSRNOG00000011065)	Cntnap4 (ENSRNOG00000011231)	Syce1l (ENSRNOG00000031097) #7	Mon1b (ENSRNOG00000011552)	Adamts18 (ENSRNOG00000011575) #8	ENSRNOG00000066574	Nudt7 (ENSRNOG00000011976) #9	Vat1l (ENSRNOG00000011989) #10	Clec3a (ENSRNOG00000070954) #11	Wwox (ENSRNOG00000012030) #12	Maf (ENSRNOG00000012428) #16	Dynlrb2 (ENSRNOG00000012450)	Cdyl2 (ENSRNOG00000042888) #19	Cmc2 (ENSRNOG00000068690)	Cenpn (ENSRNOG00000011296) #21	Atmin (ENSRNOG00000011422) #22	C19h16orf46 (ENSRNOG00000045541) #23	Gcsh (ENSRNOG00000011535) #24	Pkd1l2 (ENSRNOG00000045626) #25	Bco1 (ENSRNOG00000012027) #27	Gan (ENSRNOG00000012671) #28	Cmip (ENSRNOG00000013178) #29	Plcg2 (ENSRNOG00000051986) #32	Sdr42e1 (ENSRNOG00000051819) #33	Hsd17b2 (ENSRNOG00000013982) #34	Mphosph6 (ENSRNOG00000050087) #35	Cdh13 (ENSRNOG00000014371) #36	Hsbp1 (ENSRNOG00000014415) #37	Mlycd (ENSRNOG00000014522)	Osgin1 (ENSRNOG00000014948)	Necab2 (ENSRNOG00000015084)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1428														ENSNGAG00000015512 #20	Cenpn (ENSNGAG00000016612) #21	Atmin (ENSNGAG00000000027) #22	1700030J22Rik (ENSNGAG00000017698) #23	Gcsh (ENSNGAG00000000077) #24
Kangaroo rat	MODERN SPECIES	337	Adat1 (ENSDORG00000004779)	Kars (ENSDORG00000004780)	Terf2ip (ENSDORG00000004783)	Cntnap4 (ENSDORG00000010466)	Mon1b (ENSDORG00000003584)	Adamts18 (ENSDORG00000003587) #8	Nudt7 (ENSDORG00000011038) #9	Vat1l (ENSDORG00000005299) #10	Clec3a (ENSDORG00000014965) #11	Wwox (ENSDORG00000014966) #12	Maf (ENSDORG00000028766) #16	Dynlrb2 (ENSDORG00000000891) #18	Cdyl2 (ENSDORG00000011301) #19	ENSDORG00000010432 #20	Cenpn (ENSDORG00000000402) #21	Atmin (ENSDORG00000029539) #22	1700030J22Rik (ENSDORG00000007829) #23	ENSDORG00000007831 #24	Bco1 (ENSDORG00000007838) #27	Gan (ENSDORG00000007841) #28	Cmip (ENSDORG00000007997) #29	Plcg2 (ENSDORG00000016026) #32	Sdr42e1 (ENSDORG00000007291) #33	Hsd17b2 (ENSDORG00000029871) #34	Mphosph6 (ENSDORG00000011060) #35	Cdh13 (ENSDORG00000015523) #36	ENSDORG00000009913	ENSDORG00000001345	Necab2 (ENSDORG00000001348)	Slc38a8 (ENSDORG00000016238)	Mbtps1 (ENSDORG00000016240)
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00940000154420.B	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.j #35	ENSGT00940000155218.B #36	ENSGT00390000006293.xc #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Hystricomorpha	ANCESTRAL SPECIES	22	ENSGT01030000234618.A	ENSGT00390000005351.d	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.j #35	ENSGT00940000155218.B #36	ENSGT00390000006293.xc #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Hystricomorpha_a	ANCESTRAL SPECIES	22	ENSGT01030000234618.A	ENSGT00390000005351.d	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32
Hystricomorpha_b	ANCESTRAL SPECIES	15	ENSGT01030000234618.A	ENSGT00390000005351.d	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32
Long-tailed chinchilla	MODERN SPECIES	229					MON1B (ENSCLAG00000000195)	ENSCLAG00000000207 #7	ADAMTS18 (ENSCLAG00000000225) #8	NUDT7 (ENSCLAG00000000398) #9	VAT1L (ENSCLAG00000000415) #10	CLEC3A (ENSCLAG00000000418) #11	WWOX (ENSCLAG00000000478) #12	DYNLRB2 (ENSCLAG00000000937) #18	CDYL2 (ENSCLAG00000000214) #19	CMC2 (ENSCLAG00000000295) #20	CENPN (ENSCLAG00000000300) #21	ATMIN (ENSCLAG00000000316) #22	ENSCLAG00000000329 #23	GCSH (ENSCLAG00000000355) #24	PKD1L2 (ENSCLAG00000000118) #25	BCO1 (ENSCLAG00000000277) #27	GAN (ENSCLAG00000000989) #28	CMIP (ENSCLAG00000000406) #29	PLCG2 (ENSCLAG00000000592) #32
Degu	MODERN SPECIES	52	TERF2IP (ENSODEG00000013617)	CNTNAP4 (ENSODEG00000014247)	MON1B (ENSODEG00000013202)	ENSODEG00000013470 #7	ADAMTS18 (ENSODEG00000013530) #8	NUDT7 (ENSODEG00000012841) #9	VAT1L (ENSODEG00000013630) #10	CLEC3A (ENSODEG00000015370) #11	WWOX (ENSODEG00000014111) #12	MAF (ENSODEG00000014515) #16	DYNLRB2 (ENSODEG00000012819) #18	CDYL2 (ENSODEG00000012881) #19	ENSODEG00000019996	CMC2 (ENSODEG00000014155) #20	CENPN (ENSODEG00000012974) #21	ATMIN (ENSODEG00000012463) #22	GCSH (ENSODEG00000013012) #24	PKD1L2 (ENSODEG00000013047) #25	BCO1 (ENSODEG00000013835) #27	GAN (ENSODEG00000014419) #28	CMIP (ENSODEG00000013897) #29	PLCG2 (ENSODEG00000014144) #32	ENSODEG00000020092
Guinea pig	MODERN SPECIES	118					MON1B (ENSCPOG00000013894)	SYCE1L (ENSCPOG00000013897) #7	ADAMTS18 (ENSCPOG00000013899) #8	NUDT7 (ENSCPOG00000040012) #9	VAT1L (ENSCPOG00000007669) #10	CLEC3A (ENSCPOG00000033144) #11	WWOX (ENSCPOG00000001954) #12	DYNLRB2 (ENSCPOG00000021696) #18	CDYL2 (ENSCPOG00000008786) #19	CMC2 (ENSCPOG00000012364) #20	CENPN (ENSCPOG00000004015) #21	ATMIN (ENSCPOG00000020155) #22	ENSCPOG00000040141 #23	GCSH (ENSCPOG00000009983) #24
Naked mole-rat female	MODERN SPECIES	26	ENSHGLG00000037762	CNTNAP4 (ENSHGLG00000014557)	MON1B (ENSHGLG00000011826)	ENSHGLG00000042594	ADAMTS18 (ENSHGLG00000012658) #8	NUDT7 (ENSHGLG00000011902) #9	VAT1L (ENSHGLG00000010671) #10	CLEC3A (ENSHGLG00000042627) #11	WWOX (ENSHGLG00000013627) #12	MAF (ENSHGLG00000037503) #16	DYNLRB2 (ENSHGLG00000009690) #18	CDYL2 (ENSHGLG00000018737) #19	ENSHGLG00000019436	ENSHGLG00000039367	CENPN (ENSHGLG00000050859) #21	ATMIN (ENSHGLG00000014861) #22	C16orf46 (ENSHGLG00000034703) #23	GCSH (ENSHGLG00000044660) #24	ENSHGLG00000038072 #25	BCO1 (ENSHGLG00000017639) #27	GAN (ENSHGLG00000018670) #28	CMIP (ENSHGLG00000009888) #29	PLCG2 (ENSHGLG00000014242) #32	SDR42E1 (ENSHGLG00000010816) #33	ENSHGLG00000038316 #34	MPHOSPH6 (ENSHGLG00000019140) #35	ENSHGLG00000045793	ENSHGLG00000018583	CIAO2B (ENSHGLG00000043672)	RRAD (ENSHGLG00000016885)	CDH16 (ENSHGLG00000019376)
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00940000154420.B	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.i.a #35	ENSGT00940000155218.B #36	ENSGT00390000006293.xc #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Marmotini	ANCESTRAL SPECIES	17	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00940000154420.B	ENSGT00390000004738.c #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.ob.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.i.a #35	ENSGT00940000155218.B #36	ENSGT00390000006293.xc #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Alpin marmot	MODERN SPECIES	43	TERF2IP (ENSMMMG00000012629)	CNTNAP4 (ENSMMMG00000012584)	ENSMMMG00000012568	MON1B (ENSMMMG00000012559)	ADAMTS18 (ENSMMMG00000012500) #8	NUDT7 (ENSMMMG00000012478) #9	VAT1L (ENSMMMG00000012469) #10	CLEC3A (ENSMMMG00000012467) #11	WWOX (ENSMMMG00000012447) #12	ENSMMMG00000012440 #16	DYNLRB2 (ENSMMMG00000012433) #18	CDYL2 (ENSMMMG00000012427) #19	CMC2 (ENSMMMG00000012416) #20	ENSMMMG00000012414	ENSMMMG00000012408 #21	ATMIN (ENSMMMG00000012386) #22	C16orf46 (ENSMMMG00000012372) #23	ENSMMMG00000012364 #24	PKD1L2 (ENSMMMG00000012278) #25	BCO1 (ENSMMMG00000012247) #27	GAN (ENSMMMG00000012233) #28	CMIP (ENSMMMG00000012172) #29	ENSMMMG00000012168	PLCG2 (ENSMMMG00000012131) #32	SDR42E1 (ENSMMMG00000012120) #33	HSD17B2 (ENSMMMG00000012113) #34	ENSMMMG00000012102 #35	ENSMMMG00000012088	CDH13 (ENSMMMG00000012072) #36	MLYCD (ENSMMMG00000012063)	OSGIN1 (ENSMMMG00000012058)
Marmotini_b	ANCESTRAL SPECIES	7	ENSGT01030000234618.A	ENSGT00390000005351	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738.c #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.ob.b #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.i.a.b #35
Squirrel	MODERN SPECIES	75	TERF2IP (ENSSTOG00000023669)	CNTNAP4 (ENSSTOG00000000938)	MON1B (ENSSTOG00000027070)	ENSSTOG00000026850 #7	ADAMTS18 (ENSSTOG00000012392) #8	NUDT7 (ENSSTOG00000028240) #9	VAT1L (ENSSTOG00000005476) #10	CLEC3A (ENSSTOG00000005493) #11	WWOX (ENSSTOG00000028005) #12	DYNLRB2 (ENSSTOG00000023418) #18	CDYL2 (ENSSTOG00000013005) #19	CMC2 (ENSSTOG00000033130) #20	ENSSTOG00000030854 #21	ENSSTOG00000007345 #21	C16orf46 (ENSSTOG00000007385) #23	ATMIN (ENSSTOG00000007376) #22	GCSH (ENSSTOG00000016433) #24	PKD1L2 (ENSSTOG00000007401) #25	BCO1 (ENSSTOG00000007469) #27	GAN (ENSSTOG00000007492) #28	CMIP (ENSSTOG00000006702) #29	PLCG2 (ENSSTOG00000005756) #32	SDR42E1 (ENSSTOG00000027319) #33	HSD17B2 (ENSSTOG00000021305) #34	ENSSTOG00000019608 #35
Arctic ground squirrel	MODERN SPECIES	113				ENSUPAG00010009207	MON1B (ENSUPAG00010009187)	ADAMTS18 (ENSUPAG00010009111) #8	NUDT7 (ENSUPAG00010009093) #9	VAT1L (ENSUPAG00010009071) #10	CLEC3A (ENSUPAG00010009058) #11	WWOX (ENSUPAG00010009031) #12	MAF (ENSUPAG00010009006) #16	DYNLRB2 (ENSUPAG00010008995) #18	CDYL2 (ENSUPAG00010008980) #19	CMC2 (ENSUPAG00010008966) #20	ENSUPAG00010008959 #21	ATMIN (ENSUPAG00010008930) #22	C16orf46 (ENSUPAG00010008921) #23	ENSUPAG00010008909 #24	PKD1L2 (ENSUPAG00010008770) #25	BCO1 (ENSUPAG00010008730) #27	GAN (ENSUPAG00010008708) #28	CMIP (ENSUPAG00010008669) #29	ENSUPAG00010008662	PLCG2 (ENSUPAG00010008607) #32	SDR42E1 (ENSUPAG00010008582) #33	HSD17B2 (ENSUPAG00010008573) #34	ENSUPAG00010008571 #35
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	8	CNTNAP4 (ENSSVLG00005016453)	MON1B (ENSSVLG00005016284)	SYCE1L (ENSSVLG00005016146) #7	ENSSVLG00005016092	ADAMTS18 (ENSSVLG00005015898) #8	NUDT7 (ENSSVLG00005015783) #9	VAT1L (ENSSVLG00005015671) #10	CLEC3A (ENSSVLG00005015615) #11	ENSSVLG00005015573	WWOX (ENSSVLG00005015526) #12	ENSSVLG00005015446 #16	DYNLRB2 (ENSSVLG00005015349) #18	CDYL2 (ENSSVLG00005015278) #19	CMC2 (ENSSVLG00005015210) #20	CENPN (ENSSVLG00005015134) #21	ENSSVLG00005015037 #22	C16orf46 (ENSSVLG00005014992) #23	ENSSVLG00005025763	BCO1 (ENSSVLG00005025719) #27	GAN (ENSSVLG00005025710) #28	ENSSVLG00005025705	PLCG2 (ENSSVLG00005025677) #32	SDR42E1 (ENSSVLG00005025668) #33	ENSSVLG00005025661	HSD17B2 (ENSSVLG00005025655) #34	MPHOSPH6 (ENSSVLG00005025646) #35	CDH13 (ENSSVLG00005025632) #36	HSBP1 (ENSSVLG00005025608) #37	MLYCD (ENSSVLG00005025603)	OSGIN1 (ENSSVLG00005025591)	NECAB2 (ENSSVLG00005025579)
Eurasian red squirrel	MODERN SPECIES	16	ENSSVLG00005021418	ENSSVLG00005010938	ENSSVLG00005010970	ENSSVLG00005011101	ESR1 (ENSSVLG00005011518)	CCDC170 (ENSSVLG00005011680)	ARMT1 (ENSSVLG00005011814)	RMND1 (ENSSVLG00005011890)	ZBTB2 (ENSSVLG00005011964)	AKAP12 (ENSSVLG00005012004)	MTHFD1L (ENSSVLG00005012073)	PLEKHG1 (ENSSVLG00005012201)	IYD (ENSSVLG00005012284)	PPP1R14C (ENSSVLG00005012500)	ENSSVLG00005012559	ENSSVLG00005012613 #22	ENSSVLG00005012647	ENSSVLG00005012789	LRP11 (ENSSVLG00005012935)	ENSSVLG00005013084	PCMT1 (ENSSVLG00005013272)	NUP43 (ENSSVLG00005013493)	LATS1 (ENSSVLG00005013545)	KATNA1 (ENSSVLG00005013780)	ENSSVLG00005013892	PPIL4 (ENSSVLG00005013984)	ZC3H12D (ENSSVLG00005014060)	TAB2 (ENSSVLG00005014149)	ENSSVLG00005014219	UST (ENSSVLG00005014236)	SASH1 (ENSSVLG00005014292)
Eurasian red squirrel	MODERN SPECIES	92															ENSSVLG00005015223	ENSSVLG00005015103 #22
Lagomorpha	ANCESTRAL SPECIES	19	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00940000154420.B	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212.i.b #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b.b
Rabbit	MODERN SPECIES	16	CNTNAP4 (ENSOCUG00000002907)	ENSOCUG00000029408	MON1B (ENSOCUG00000024409)	ADAMTS18 (ENSOCUG00000014350) #8	NUDT7 (ENSOCUG00000001859) #9	VAT1L (ENSOCUG00000001863) #10	CLEC3A (ENSOCUG00000001866) #11	WWOX (ENSOCUG00000002504) #12	ENSOCUG00000035588	DYNLRB2 (ENSOCUG00000008578) #18	CDYL2 (ENSOCUG00000008581) #19	ENSOCUG00000035609	CMC2 (ENSOCUG00000013790) #20	ENSOCUG00000032694	CENPN (ENSOCUG00000000024) #21	ATMIN (ENSOCUG00000007807) #22	C16orf46 (ENSOCUG00000007811) #23	ENSOCUG00000011557 #24	ENSOCUG00000036494	ENSOCUG00000011939 #25	BCO1 (ENSOCUG00000001072) #27	GAN (ENSOCUG00000001073) #28	CMIP (ENSOCUG00000002120) #29	PLCG2 (ENSOCUG00000013105) #32	SDR42E1 (ENSOCUG00000016649) #33	HSD17B2 (ENSOCUG00000016655) #34	ENSOCUG00000024341 #35	CDH13 (ENSOCUG00000025617) #36	HSBP1 (ENSOCUG00000001286) #37	ENSOCUG00000016223	ENSOCUG00000033324
Pika	MODERN SPECIES	3054													CDYL2 (ENSOPRG00000003180) #19	CMC2 (ENSOPRG00000003190) #20	CENPN (ENSOPRG00000003202) #21	ATMIN (ENSOPRG00000003220) #22	C16orf46 (ENSOPRG00000003260) #23	GCSH (ENSOPRG00000003281) #24	ENSOPRG00000003293 #25	BCO1 (ENSOPRG00000003425) #27	GAN (ENSOPRG00000003458) #28	CMIP (ENSOPRG00000003491) #29	PLCG2 (ENSOPRG00000003571) #32
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00940000167952	ENSGT00390000004738 #21	ENSGT00390000016908 #20	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000013091 #22
Common shrew	MODERN SPECIES	4757																ENSSARG00000011857 #22
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00940000167952	ENSGT00390000004738 #21	ENSGT00390000016908 #20	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Suina	ANCESTRAL SPECIES	36	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00940000167952	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Pig	DUPLICATION
Pig	MODERN SPECIES	14	ENSSSCG00000039747	MON1B (ENSSSCG00000002701)	ENSSSCG00000002700 #7	ENSSSCG00000034356	ADAMTS18 (ENSSSCG00000038627) #8	NUDT7 (ENSSSCG00000002697) #9	VAT1L (ENSSSCG00000002696) #10	CLEC3A (ENSSSCG00000034604) #11	WWOX (ENSSSCG00000027415) #12	ENSSSCG00000058620	MAF (ENSSSCG00000040607) #16	DYNLRB2 (ENSSSCG00000031421) #18	CDYL2 (ENSSSCG00000038128) #19	ENSSSCG00000032060	CENPN (ENSSSCG00000039216) #21	ENSSSCG00000032216 #22	C16orf46 (ENSSSCG00000035388) #23	ENSSSCG00000040203 #24	PKD1L2 (ENSSSCG00000039200) #25	BCO1 (ENSSSCG00000036572) #27	GAN (ENSSSCG00000002690) #28	CMIP (ENSSSCG00000002689) #29	PLCG2 (ENSSSCG00000002688) #32	SDR42E1 (ENSSSCG00000035182) #33	HSD17B2 (ENSSSCG00000038221) #34	ENSSSCG00000034572 #35	CDH13 (ENSSSCG00000002684) #36	HSBP1 (ENSSSCG00000057749) #37	MLYCD (ENSSSCG00000031450)	OSGIN1 (ENSSSCG00000032115)	SLC38A8 (ENSSSCG00000039218)
Pig	MODERN SPECIES	5	TLL2 (ENSSSCG00000010507)	OPALIN (ENSSSCG00000010506)	DNTT (ENSSSCG00000010505)	BLNK (ENSSSCG00000010504)	ZNF518A (ENSSSCG00000010503)	CCNJ (ENSSSCG00000010502)	CC2D2B (ENSSSCG00000046471)	ENTPD1 (ENSSSCG00000010497)	TCTN3 (ENSSSCG00000010496)	ALDH18A1 (ENSSSCG00000010495)	SORBS1 (ENSSSCG00000010494)	ENSSSCG00000055925	PDLIM1 (ENSSSCG00000010493)	ENSSSCG00000051054	CYP2C42 (ENSSSCG00000055326)	ENSSSCG00000010489 #22	ENSSSCG00000062451	ENSSSCG00000058563	CYP2C49 (ENSSSCG00000059716)	ENSSSCG00000035347	ENSSSCG00000055019	ENSSSCG00000032095	ENSSSCG00000061845	ENSSSCG00000057811	HELLS (ENSSSCG00000010486)	ENSSSCG00000022567	TBC1D12 (ENSSSCG00000010485)	NOC3L (ENSSSCG00000010484)	PLCE1 (ENSSSCG00000010483)	SLC35G1 (ENSSSCG00000027230)	LGI1 (ENSSSCG00000010481)
Chacoan peccary	MODERN SPECIES	10	DUXB (ENSCWAG00000002591)	CNTNAP4 (ENSCWAG00000002643)	ENSCWAG00000002981	MON1B (ENSCWAG00000003007)	ADAMTS18 (ENSCWAG00000003043) #8	NUDT7 (ENSCWAG00000003085) #9	VAT1L (ENSCWAG00000003111) #10	CLEC3A (ENSCWAG00000003144) #11	WWOX (ENSCWAG00000003182) #12	MAF (ENSCWAG00000003304) #16	DYNLRB2 (ENSCWAG00000003320) #18	CDYL2 (ENSCWAG00000003341) #19	CMC2 (ENSCWAG00000003359) #20	ENSCWAG00000003362	CENPN (ENSCWAG00000003382) #21	ATMIN (ENSCWAG00000003427) #22	C16orf46 (ENSCWAG00000003437) #23	ENSCWAG00000003443 #24	ENSCWAG00000003448	ENSCWAG00000003458 #25	BCO1 (ENSCWAG00000003482) #27	GAN (ENSCWAG00000003493) #28	CMIP (ENSCWAG00000003539) #29	PLCG2 (ENSCWAG00000003695) #32	SDR42E1 (ENSCWAG00000003827) #33	HSD17B2 (ENSCWAG00000003852) #34	ENSCWAG00000003885	CDH13 (ENSCWAG00000003978) #36	ENSCWAG00000004352 #37	MLYCD (ENSCWAG00000004385)	OSGIN1 (ENSCWAG00000004417)
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT01000000214745.b.a	ENSGT00390000004738 #21	ENSGT00390000016908 #20	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.f #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00940000159996.b	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000004738.q.a #21	ENSGT00390000016908 #20	ENSGT00390000004738.r #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.f #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000004738.q.a #21	ENSGT00390000016908 #20	ENSGT00390000004738.r #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.f #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT01050000244868.a.a.a.b.a.b.b	ENSGT00940000162711	ENSGT00940000159996.b	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00990000203553.c.b	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000004738.q.a #21	ENSGT00390000016908 #20	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.f #24	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00940000159996.b.a	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000157674	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00990000203553.c.b	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000004738.q.a #21	ENSGT00390000016908 #20	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.f #24	ENSGT00950000182913.A.b.b #27	ENSGT00940000159996.b.a	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Narwhal	MODERN SPECIES	296	ENSMMNG00015000755	CNTNAP4 (ENSMMNG00015000561)	MON1B (ENSMMNG00015000449)	SYCE1L (ENSMMNG00015000389) #7	ADAMTS18 (ENSMMNG00015000332) #8	NUDT7 (ENSMMNG00015000278) #9	VAT1L (ENSMMNG00015000235) #10	CLEC3A (ENSMMNG00015000210) #11	WWOX (ENSMMNG00015000155) #12	ENSMMNG00015000027	MAF (ENSMMNG00015003720) #16	DYNLRB2 (ENSMMNG00015003694) #18	CDYL2 (ENSMMNG00015003666) #19	CENPN (ENSMMNG00015003599) #21	CMC2 (ENSMMNG00015003550) #20	ATMIN (ENSMMNG00015003532) #22	C16orf46 (ENSMMNG00015003505) #23	ENSMMNG00015003480	BCO1 (ENSMMNG00015003389) #27	ENSMMNG00015003355	GAN (ENSMMNG00015003328) #28	CMIP (ENSMMNG00015003203) #29	PLCG2 (ENSMMNG00015003113) #32	SDR42E1 (ENSMMNG00015003089) #33	HSD17B2 (ENSMMNG00015003068) #34	MPHOSPH6 (ENSMMNG00015003044) #35	CDH13 (ENSMMNG00015002972) #36	HSBP1 (ENSMMNG00015002935) #37	MLYCD (ENSMMNG00015002914)	OSGIN1 (ENSMMNG00015002851)	NECAB2 (ENSMMNG00015002809)
Beluga whale	MODERN SPECIES	12	ENSDLEG00000002292	CNTNAP4 (ENSDLEG00000002209)	MON1B (ENSDLEG00000002182)	ADAMTS18 (ENSDLEG00000002130) #8	NUDT7 (ENSDLEG00000002100) #9	VAT1L (ENSDLEG00000002079) #10	CLEC3A (ENSDLEG00000002066) #11	ENSDLEG00000002057	ENSDLEG00000002047 #12	ENSDLEG00000002038	MAF (ENSDLEG00000002029) #16	DYNLRB2 (ENSDLEG00000002002) #18	CDYL2 (ENSDLEG00000001993) #19	CENPN (ENSDLEG00000001968) #21	ENSDLEG00000001954 #20	ATMIN (ENSDLEG00000001947) #22	CUNH16orf46 (ENSDLEG00000001938) #23	GCSH (ENSDLEG00000001922) #24	BCO1 (ENSDLEG00000001896) #27	ENSDLEG00000001893	GAN (ENSDLEG00000001871) #28	CMIP (ENSDLEG00000001842) #29	PLCG2 (ENSDLEG00000001817) #32	SDR42E1 (ENSDLEG00000001808) #33	HSD17B2 (ENSDLEG00000001788) #34	MPHOSPH6 (ENSDLEG00000001774) #35	CDH13 (ENSDLEG00000001760) #36	MLYCD (ENSDLEG00000001753)	OSGIN1 (ENSDLEG00000001743)	NECAB2 (ENSDLEG00000001725)	SLC38A8 (ENSDLEG00000001712)
Vaquita	MODERN SPECIES	10	ENSPSNG00000014400	CNTNAP4 (ENSPSNG00000014526)	MON1B (ENSPSNG00000016015)	SYCE1L (ENSPSNG00000016164) #7	ADAMTS18 (ENSPSNG00000016335) #8	NUDT7 (ENSPSNG00000016645) #9	VAT1L (ENSPSNG00000016714) #10	CLEC3A (ENSPSNG00000016763) #11	WWOX (ENSPSNG00000016826) #12	ENSPSNG00000016902	MAF (ENSPSNG00000016924) #16	DYNLRB2 (ENSPSNG00000016981) #18	CDYL2 (ENSPSNG00000017043) #19	ENSPSNG00000017109	CENPN (ENSPSNG00000017184) #21	ATMIN (ENSPSNG00000017296) #22	C16orf46 (ENSPSNG00000017374) #23	ENSPSNG00000017406 #24	BCO1 (ENSPSNG00000017682) #27	GAN (ENSPSNG00000017829) #28	ENSPSNG00000017863	CMIP (ENSPSNG00000017922) #29	PLCG2 (ENSPSNG00000018224) #32	SDR42E1 (ENSPSNG00000018307) #33	HSD17B2 (ENSPSNG00000018349) #34	MPHOSPH6 (ENSPSNG00000018456) #35	CDH13 (ENSPSNG00000018575) #36	HSBP1 (ENSPSNG00000018883) #37	MLYCD (ENSPSNG00000018921)	OSGIN1 (ENSPSNG00000018976)	NECAB2 (ENSPSNG00000019029)
Dolphin	MODERN SPECIES	3195														CMC2 (ENSTTRG00000007982) #20	CENPN (ENSTTRG00000007988) #21	ATMIN (ENSTTRG00000007989) #22	C16orf46 (ENSTTRG00000007991) #23	GCSH (ENSTTRG00000007992) #24	PKD1L2 (ENSTTRG00000007994) #25
Sperm whale	MODERN SPECIES	8	KARS (ENSPCTG00005014053)	TERF2IP (ENSPCTG00005014315)	ENSPCTG00005014372	CNTNAP4 (ENSPCTG00005014435)	MON1B (ENSPCTG00005015899)	SYCE1L (ENSPCTG00005016040) #7	ENSPCTG00005016194 #8	NUDT7 (ENSPCTG00005016259) #9	VAT1L (ENSPCTG00005016341) #10	CLEC3A (ENSPCTG00005016505) #11	WWOX (ENSPCTG00005016572) #12	DYNLRB2 (ENSPCTG00005016690) #18	CDYL2 (ENSPCTG00005016738) #19	ENSPCTG00005016761	CENPN (ENSPCTG00005016837) #21	ATMIN (ENSPCTG00005016937) #22	C17H16orf46 (ENSPCTG00005016971) #23	ENSPCTG00005017009	ENSPCTG00005017044	ENSPCTG00005017248 #27	GAN (ENSPCTG00005017301) #28	ENSPCTG00005017350	PLCG2 (ENSPCTG00005017420) #32	SDR42E1 (ENSPCTG00005017582) #33	HSD17B2 (ENSPCTG00005017614) #34	MPHOSPH6 (ENSPCTG00005017703) #35	CDH13 (ENSPCTG00005017798) #36	HSBP1 (ENSPCTG00005018092) #37	ENSPCTG00005018157	OSGIN1 (ENSPCTG00005018585)	ENSPCTG00005018655
Blue whale	MODERN SPECIES	10	CNTNAP4 (ENSBMSG00010013511)	ENSBMSG00010013645	MON1B (ENSBMSG00010013661)	SYCE1L (ENSBMSG00010013688) #7	ADAMTS18 (ENSBMSG00010013750) #8	ENSBMSG00010013805	NUDT7 (ENSBMSG00010013822) #9	VAT1L (ENSBMSG00010013861) #10	CLEC3A (ENSBMSG00010013904) #11	WWOX (ENSBMSG00010013976) #12	MAF (ENSBMSG00010014160) #16	DYNLRB2 (ENSBMSG00010014210) #18	CDYL2 (ENSBMSG00010014282) #19	ENSBMSG00010014361	ENSBMSG00010014412 #21	ATMIN (ENSBMSG00010014471) #22	C16orf46 (ENSBMSG00010014516) #23	ENSBMSG00010014571 #24	BCO1 (ENSBMSG00010014729) #27	GAN (ENSBMSG00010014760) #28	ENSBMSG00010014813	CMIP (ENSBMSG00010014952) #29	PLCG2 (ENSBMSG00010015932) #32	SDR42E1 (ENSBMSG00010016016) #33	HSD17B2 (ENSBMSG00010016042) #34	ENSBMSG00010016071 #35	CDH13 (ENSBMSG00010016147) #36	ENSBMSG00010016302 #37	MLYCD (ENSBMSG00010016323)	ENSBMSG00010016347	NECAB2 (ENSBMSG00010016382)
Pecora	ANCESTRAL SPECIES	4	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.h.a.a.b #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Yarkand deer	MODERN SPECIES	27	ADAMTS18 (ENSCHYG00000000109) #8	ENSCHYG00000000127	ENSCHYG00000000143	NUDT7 (ENSCHYG00000000156) #9	VAT1L (ENSCHYG00000000176) #10	CLEC3A (ENSCHYG00000000192) #11	WWOX (ENSCHYG00000000219) #12	MAF (ENSCHYG00000000268) #16	DYNLRB2 (ENSCHYG00000000287) #18	CDYL2 (ENSCHYG00000000319) #19	ENSCHYG00000000338	ENSCHYG00000000345	ENSCHYG00000000359	ENSCHYG00000000384	ENSCHYG00000000403 #21	ATMIN (ENSCHYG00000000420) #22	C16orf46 (ENSCHYG00000000440) #23	ENSCHYG00000000480 #24	ENSCHYG00000000496	ENSCHYG00000000525 #25	BCO1 (ENSCHYG00000000591) #27	GAN (ENSCHYG00000000629) #28	CMIP (ENSCHYG00000000697) #29	PLCG2 (ENSCHYG00000000839) #32	SDR42E1 (ENSCHYG00000000977) #33	HSD17B2 (ENSCHYG00000000993) #34	ENSCHYG00000001028 #35	CDH13 (ENSCHYG00000001073) #36	ENSCHYG00000001159	HSBP1 (ENSCHYG00000001187) #37	MLYCD (ENSCHYG00000001202)
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908.e #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.h.a.a.b #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	1191	ENSMMSG00000005926	MON1B (ENSMMSG00000005961)	ADAMTS18 (ENSMMSG00000006104) #8	NUDT7 (ENSMMSG00000006153) #9	VAT1L (ENSMMSG00000006188) #10	ENSMMSG00000006218	CLEC3A (ENSMMSG00000006231) #11	WWOX (ENSMMSG00000006266) #12	ENSMMSG00000006308	MAF (ENSMMSG00000006317) #16	ENSMMSG00000006336	DYNLRB2 (ENSMMSG00000006363) #18	CDYL2 (ENSMMSG00000006390) #19	ENSMMSG00000006429 #20	CENPN (ENSMMSG00000006463) #21	ENSMMSG00000006535 #22	C16orf46 (ENSMMSG00000006560) #23	ENSMMSG00000006588 #24	ENSMMSG00000006620	ENSMMSG00000006646 #25	BCO1 (ENSMMSG00000006711) #27	GAN (ENSMMSG00000006796) #28	CMIP (ENSMMSG00000006942) #29	ENSMMSG00000007554	PLCG2 (ENSMMSG00000007574) #32	SDR42E1 (ENSMMSG00000007630) #33	HSD17B2 (ENSMMSG00000007653) #34	MPHOSPH6 (ENSMMSG00000007688) #35	CDH13 (ENSMMSG00000007802) #36	HSBP1 (ENSMMSG00000008024) #37	MLYCD (ENSMMSG00000008057)
Siberian musk deer	MODERN SPECIES	1269	SLIT2 (ENSMMSG00000015533)	PACRGL (ENSMMSG00000015388)	KCNIP4 (ENSMMSG00000014468)	ENSMMSG00000014413	ADGRA3 (ENSMMSG00000014314)	GBA3 (ENSMMSG00000014264)	PPARGC1A (ENSMMSG00000014222)	DHX15 (ENSMMSG00000014182)	SOD3 (ENSMMSG00000014159)	CCDC149 (ENSMMSG00000014088)	LGI2 (ENSMMSG00000014063)	SEPSECS (ENSMMSG00000014034)	PI4K2B (ENSMMSG00000013983)	ENSMMSG00000013962	ANAPC4 (ENSMMSG00000013938)	ENSMMSG00000013917 #22	SLC34A2 (ENSMMSG00000013857)	SEL1L3 (ENSMMSG00000013767)	ENSMMSG00000013746	ENSMMSG00000013732	RBPJ (ENSMMSG00000013568)	CCKAR (ENSMMSG00000013523)	ENSMMSG00000013500	TBC1D19 (ENSMMSG00000013351)	STIM2 (ENSMMSG00000013185)	ENSMMSG00000013164	ENSMMSG00000013140	ENSMMSG00000013133	PCDH7 (ENSMMSG00000013089)	ENSMMSG00000013078	ENSMMSG00000013060
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908.e #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.h.a.a.b #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00530000064208.b.c.b	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908.e #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.h.a.a.b.a.a.a #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00910000146900	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410
Bos	ANCESTRAL SPECIES	4	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00530000064208.b.c.b	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908.e #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.h.a.a.b.a.a.a.b #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00960000192777	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00910000146900	ENSGT00940000155218.B #36	ENSGT00390000006293 #37
Bos_b	ANCESTRAL SPECIES		ENSGT00390000005351	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908.e #20	ENSGT00390000004738.m #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.h.a.a.b.a.a.a.b #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00960000192777	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00910000146900	ENSGT00940000155218.B #36	ENSGT00390000006293 #37
Cow	MODERN SPECIES	9	TERF2IP (ENSBTAG00000015686)	CNTNAP4 (ENSBTAG00000026004)	ENSBTAG00000012131	MON1B (ENSBTAG00000052957)	ADAMTS18 (ENSBTAG00000001010) #8	NUDT7 (ENSBTAG00000007184) #9	VAT1L (ENSBTAG00000018146) #10	CLEC3A (ENSBTAG00000046772) #11	WWOX (ENSBTAG00000015894) #12	ENSBTAG00000050959	MAF (ENSBTAG00000044192) #16	DYNLRB2 (ENSBTAG00000017752) #18	CDYL2 (ENSBTAG00000017112) #19	CMC2 (ENSBTAG00000017009) #20	CENPN (ENSBTAG00000011635) #21	ATMIN (ENSBTAG00000008213) #22	C18H16orf46 (ENSBTAG00000023765) #23	GCSH (ENSBTAG00000006795) #24	PKD1L2 (ENSBTAG00000012693) #25	ENSBTAG00000051615	BCO1 (ENSBTAG00000001026) #27	GAN (ENSBTAG00000009428) #28	ENSBTAG00000050732	CMIP (ENSBTAG00000013524) #29	PLCG2 (ENSBTAG00000002103) #32	SDR42E1 (ENSBTAG00000018394) #33	HSD17B2 (ENSBTAG00000003234) #34	MPHOSPH6 (ENSBTAG00000009746) #35	ENSBTAG00000054821	CDH13 (ENSBTAG00000034373) #36	HSBP1 (ENSBTAG00000053436) #37
Hybrid Bos Indicus	MODERN SPECIES	9		CNTNAP4 (ENSBIXG00005028712)	ENSBIXG00005028795	MON1B (ENSBIXG00005002293)	SYCE1L (ENSBIXG00005005033) #7	ADAMTS18 (ENSBIXG00005005070) #8	NUDT7 (ENSBIXG00005002142) #9	VAT1L (ENSBIXG00005002111) #10	CLEC3A (ENSBIXG00005005098) #11	WWOX (ENSBIXG00005002001) #12	MAF (ENSBIXG00005001960) #16	DYNLRB2 (ENSBIXG00005001913) #18	CDYL2 (ENSBIXG00005005167) #19	ENSBIXG00005005197	ENSBIXG00005005211 #21	ATMIN (ENSBIXG00005029184) #22	C16orf46 (ENSBIXG00005001704) #23	ENSBIXG00005001668 #24	ENSBIXG00005008306	ENSBIXG00005008337 #25	BCO1 (ENSBIXG00005008357) #27	GAN (ENSBIXG00005008371) #28	ENSBIXG00005008377	CMIP (ENSBIXG00005008441) #29	PLCG2 (ENSBIXG00005005354) #32	SDR42E1 (ENSBIXG00005008529) #33	HSD17B2 (ENSBIXG00005008546) #34	MPHOSPH6 (ENSBIXG00005000224) #35	CDH13 (ENSBIXG00005005903) #36	HSBP1 (ENSBIXG00005005940) #37	MLYCD (ENSBIXG00005006190)
Bos_a	ANCESTRAL SPECIES	22	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00530000064208.b.c.b	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908.e #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.h.a.a.b.a.a.a.b #24	ENSGT00390000011666.h.a.a.b.a.b #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00960000192777	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37
Domestic yak	MODERN SPECIES	12	CNTNAP4 (ENSBGRG00000024655)	ENSBGRG00000024592	MON1B (ENSBGRG00000024539)	SYCE1L (ENSBGRG00000024519) #7	ADAMTS18 (ENSBGRG00000024315) #8	ENSBGRG00000024244 #9	VAT1L (ENSBGRG00000024156) #10	CLEC3A (ENSBGRG00000024115) #11	ENSBGRG00000024103	WWOX (ENSBGRG00000023828) #12	MAF (ENSBGRG00000023768) #16	DYNLRB2 (ENSBGRG00000023709) #18	CDYL2 (ENSBGRG00000023605) #19	CMC2 (ENSBGRG00000023563) #20	CENPN (ENSBGRG00000023413) #21	ATMIN (ENSBGRG00000023349) #22	C16orf46 (ENSBGRG00000023267) #23	ENSBGRG00000023192 #24	ENSBGRG00000023174	ENSBGRG00000023167	ENSBGRG00000022947 #25	BCO1 (ENSBGRG00000022755) #27	GAN (ENSBGRG00000022506) #28	ENSBGRG00000022460	CMIP (ENSBGRG00000020212) #29	PLCG2 (ENSBGRG00000019275) #32	SDR42E1 (ENSBGRG00000019208) #33	HSD17B2 (ENSBGRG00000019120) #34	MPHOSPH6 (ENSBGRG00000019000) #35	CDH13 (ENSBGRG00000018217) #36	HSBP1 (ENSBGRG00000018120) #37
Wild yak	MODERN SPECIES	2170										MAF (ENSBMUG00000006426) #16	ENSBMUG00000006431	DYNLRB2 (ENSBMUG00000006439) #18	CDYL2 (ENSBMUG00000006444) #19	CMC2 (ENSBMUG00000006462) #20	CENPN (ENSBMUG00000006510) #21	ATMIN (ENSBMUG00000006529) #22	C16orf46 (ENSBMUG00000006558) #23	ENSBMUG00000006574 #24	ENSBMUG00000006605	ENSBMUG00000006628 #25	BCMO1 (ENSBMUG00000006665) #27	GAN (ENSBMUG00000006681) #28	ENSBMUG00000006689	CMIP (ENSBMUG00000006723) #29
American bison	MODERN SPECIES	3209	CNTNAP4 (ENSBBBG00000019886)	ENSBBBG00000005336	MON1B (ENSBBBG00000019685)	ENSBBBG00000019668 #7	ADAMTS18 (ENSBBBG00000005184) #8	NUDT7 (ENSBBBG00000019632) #9	VAT1L (ENSBBBG00000019613) #10	CLEC3A (ENSBBBG00000019590) #11	WWOX (ENSBBBG00000019578) #12	MAF (ENSBBBG00000005288) #16	ENSBBBG00000005280	DYNLRB2 (ENSBBBG00000019521) #18	CDYL2 (ENSBBBG00000019511) #19	ENSBBBG00000008949 #20	CENPN (ENSBBBG00000019457) #21	ATMIN (ENSBBBG00000019400) #22	C16orf46 (ENSBBBG00000005132) #23	ENSBBBG00000019376 #24	ENSBBBG00000005106	ENSBBBG00000007009 #25	BCO1 (ENSBBBG00000019337) #27	GAN (ENSBBBG00000008171) #28	CMIP (ENSBBBG00000009169) #29	PLCG2 (ENSBBBG00000004928) #32	SDR42E1 (ENSBBBG00000004897) #33	HSD17B2 (ENSBBBG00000019087) #34	MPHOSPH6 (ENSBBBG00000019077) #35	ENSBBBG00000019065	CDH13 (ENSBBBG00000019053) #36	ENSBBBG00000009154	HSBP1 (ENSBBBG00000008463) #37
Caprinae	ANCESTRAL SPECIES	4	ENSGT00390000005351	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908.e #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.h.a.a.b.c.a.a #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	5	ENSOARG00020021758	MON1B (ENSOARG00020021839)	ADAMTS18 (ENSOARG00020022075) #8	NUDT7 (ENSOARG00020022376) #9	VAT1L (ENSOARG00020022400) #10	ENSOARG00020022554	CLEC3A (ENSOARG00020022576) #11	WWOX (ENSOARG00020003215) #12	ENSOARG00020003259	MAF (ENSOARG00020003282) #16	DYNLRB2 (ENSOARG00020003305) #18	ENSOARG00020003382	CMC2 (ENSOARG00020003408) #20	CENPN (ENSOARG00020003427) #21	ENSOARG00020003451	ENSOARG00020003459 #22	ENSOARG00020003523 #24	ENSOARG00020003562	ENSOARG00020003601 #25	BCO1 (ENSOARG00020003735) #27	GAN (ENSOARG00020003869) #28	CMIP (ENSOARG00020004094) #29	PLCG2 (ENSOARG00020005201) #32	ENSOARG00020005853	ENSOARG00020005859	ENSOARG00020005864	SDR42E1 (ENSOARG00020005879) #33	HSD17B2 (ENSOARG00020005890) #34	MPHOSPH6 (ENSOARG00020005925) #35	CDH13 (ENSOARG00020005989) #36	ENSOARG00020006229 #37
Rambouillet Sheep	MODERN SPECIES	17	ENSOARG00020014283	MAP3K21 (ENSOARG00020014333)	ENSOARG00020014471	KCNK1 (ENSOARG00020014578)	SLC35F3 (ENSOARG00020014634)	ENSOARG00020014831	TARBP1 (ENSOARG00020014895)	ENSOARG00020015422	IRF2BP2 (ENSOARG00020015445)	TOMM20 (ENSOARG00020015523)	ENSOARG00020015590	ARID4B (ENSOARG00020015673)	GGPS1 (ENSOARG00020016218)	TBCE (ENSOARG00020016274)	B3GALNT2 (ENSOARG00020016542)	ENSOARG00020016607 #22	GNG4 (ENSOARG00020016634)	LYST (ENSOARG00020016708)	NID1 (ENSOARG00020017963)	GPR137B (ENSOARG00020018310)	ERO1B (ENSOARG00020018369)	EDARADD (ENSOARG00020018503)	LGALS8 (ENSOARG00020018619)	HEATR1 (ENSOARG00020018840)	ACTN2 (ENSOARG00020019247)	MTR (ENSOARG00020019401)	RYR2 (ENSOARG00020019907)	ENSOARG00020020560	ZP4 (ENSOARG00020020715)	CHRM3 (ENSOARG00020020814)	ZNF33B (ENSOARG00020020852)
Goat	MODERN SPECIES	9	MON1B (ENSCHIG00000020925)	ADAMTS18 (ENSCHIG00000011081) #8	NUDT7 (ENSCHIG00000014899) #9	VAT1L (ENSCHIG00000025649) #10	CLEC3A (ENSCHIG00000018485) #11	ENSCHIG00000021638	ENSCHIG00000018228 #12	MAF (ENSCHIG00000022588) #16	ENSCHIG00000024635	POLR2C (ENSCHIG00000012072)	DOK4 (ENSCHIG00000024959)	DYNLRB2 (ENSCHIG00000011911) #18	CDYL2 (ENSCHIG00000012454) #19	CMC2 (ENSCHIG00000013555) #20	CENPN (ENSCHIG00000013032) #21	ATMIN (ENSCHIG00000022350) #22	C16orf46 (ENSCHIG00000023947) #23	ENSCHIG00000026231 #24	PKD1L2 (ENSCHIG00000004177) #25	BCO1 (ENSCHIG00000022901) #27	GAN (ENSCHIG00000025169) #28	CMIP (ENSCHIG00000006544) #29	PLCG2 (ENSCHIG00000017356) #32	SDR42E1 (ENSCHIG00000022692) #33	HSD17B2 (ENSCHIG00000002159) #34	ENSCHIG00000006189	MPHOSPH6 (ENSCHIG00000015522) #35	ENSCHIG00000013951	CDH13 (ENSCHIG00000011245) #36	HSBP1 (ENSCHIG00000019904) #37	MLYCD (ENSCHIG00000009133)
Camelidae	ANCESTRAL SPECIES	9	ENSGT00390000005351	ENSGT00940000154537	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00940000167952	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Arabian camel	MODERN SPECIES	35	TERF2IP (ENSCDRG00005015151)	CNTNAP4 (ENSCDRG00005015194)	ENSCDRG00005015417	MON1B (ENSCDRG00005015477)	ENSCDRG00005015563 #7	ADAMTS18 (ENSCDRG00005015619) #8	NUDT7 (ENSCDRG00005015789) #9	VAT1L (ENSCDRG00005015834) #10	CLEC3A (ENSCDRG00005015888) #11	WWOX (ENSCDRG00005015930) #12	ENSCDRG00005015981	DYNLRB2 (ENSCDRG00005016530) #18	CDYL2 (ENSCDRG00005016623) #19	ENSCDRG00005016716	CENPN (ENSCDRG00005016773) #21	ATMIN (ENSCDRG00005016854) #22	C16orf46 (ENSCDRG00005000122) #23	ENSCDRG00005000130 #24	PKD1L2 (ENSCDRG00005000189) #25	BCO1 (ENSCDRG00005000320) #27	GAN (ENSCDRG00005000345) #28	CMIP (ENSCDRG00005000438) #29	PLCG2 (ENSCDRG00005001023) #32	SDR42E1 (ENSCDRG00005001117) #33	HSD17B2 (ENSCDRG00005001133) #34	MPHOSPH6 (ENSCDRG00005001161) #35	CDH13 (ENSCDRG00005001202) #36	HSBP1 (ENSCDRG00005001270) #37	MLYCD (ENSCDRG00005001279)	OSGIN1 (ENSCDRG00005001288)	NECAB2 (ENSCDRG00005001312)
Alpaca	MODERN SPECIES	4657																ATMIN (ENSVPAG00000003349) #22
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Carnivora	ANCESTRAL SPECIES	2	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Caniformia	ANCESTRAL SPECIES	1	ENSGT00940000154537	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00390000005351	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Ursidae	ANCESTRAL SPECIES	8	ENSGT00390000005351	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908.c #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.o #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293.eb #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Ursus	DUPLICATION
Ursus	ANCESTRAL SPECIES																	ENSGT00390000013091.k #22
Polar bear	MODERN SPECIES	162	KARS1 (ENSUMAG00000014559)	TERF2IP (ENSUMAG00000014570)	CNTNAP4 (ENSUMAG00000014610)	ENSUMAG00000014926	MON1B (ENSUMAG00000014940)	SYCE1L (ENSUMAG00000014944) #7	ADAMTS18 (ENSUMAG00000014963) #8	NUDT7 (ENSUMAG00000015025) #9	VAT1L (ENSUMAG00000015030) #10	CLEC3A (ENSUMAG00000015050) #11	WWOX (ENSUMAG00000015058) #12	DYNLRB2 (ENSUMAG00000015064) #18	CDYL2 (ENSUMAG00000015069) #19	ENSUMAG00000015088 #20	CENPN (ENSUMAG00000015095) #21	ATMIN (ENSUMAG00000015098) #22	C16orf46 (ENSUMAG00000015103) #23	ENSUMAG00000015107 #24	PKD1L2 (ENSUMAG00000015112) #25	ENSUMAG00000015144	BCO1 (ENSUMAG00000015159) #27	ENSUMAG00000015238	GAN (ENSUMAG00000015243) #28	CMIP (ENSUMAG00000015248) #29	PLCG2 (ENSUMAG00000015261) #32	SDR42E1 (ENSUMAG00000015268) #33	HSD17B2 (ENSUMAG00000015271) #34	MPHOSPH6 (ENSUMAG00000015279) #35	ENSUMAG00000015287	CDH13 (ENSUMAG00000015326) #36	HSBP1 (ENSUMAG00000015705) #37
American black bear	MODERN SPECIES	1207																ENSUAMG00000023936 #22
Ursus	ANCESTRAL SPECIES	109	ENSGT01030000234618.A	ENSGT00390000005351	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908.c #20	ENSGT00390000004738 #21	ENSGT00390000013091.l #22	ENSGT00390000017224 #23	ENSGT00390000011666.o #24	ENSGT00940000161577 #25	ENSGT00940000164458.d	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293.eb #37	ENSGT00390000005410	ENSGT00390000006658.b
American black bear	MODERN SPECIES	143														ENSUAMG00000006664	ENSUAMG00000006668 #21	ENSUAMG00000006675 #22	C16orf46 (ENSUAMG00000006678) #23	ENSUAMG00000006680 #24	PKD1L2 (ENSUAMG00000006681) #25	ENSUAMG00000006690	BCO1 (ENSUAMG00000006693) #27	GAN (ENSUAMG00000006697) #28	ENSUAMG00000006702	CMIP (ENSUAMG00000006703) #29	PLCG2 (ENSUAMG00000006714) #32
Giant Panda	MODERN SPECIES	3	MON1B (ENSAMEG00000014769)	SYCE1L (ENSAMEG00000014763) #7	ADAMTS18 (ENSAMEG00000009659) #8	NUDT7 (ENSAMEG00000023822) #9	VAT1L (ENSAMEG00000009628) #10	CLEC3A (ENSAMEG00000009612) #11	ENSAMEG00000009604 #12	ENSAMEG00000018329	ENSAMEG00000018324	ENSAMEG00000008069	ENSAMEG00000029152	ENSAMEG00000010346 #16	ENSAMEG00000016964 #18	CDYL2 (ENSAMEG00000016966) #19	ENSAMEG00000013929 #20	ATMIN (ENSAMEG00000013952) #22	C16orf46 (ENSAMEG00000024452) #23	ENSAMEG00000013959 #24	PKD1L2 (ENSAMEG00000029920) #25	BCO1 (ENSAMEG00000013973) #27	GAN (ENSAMEG00000014009) #28	CMIP (ENSAMEG00000014029) #29	PLCG2 (ENSAMEG00000014051) #32	SDR42E1 (ENSAMEG00000023929) #33	HSD17B2 (ENSAMEG00000029860) #34	MPHOSPH6 (ENSAMEG00000014150) #35	CDH13 (ENSAMEG00000006487) #36	HSBP1 (ENSAMEG00000006485) #37	MLYCD (ENSAMEG00000027054)	NECAB2 (ENSAMEG00000006457)	SLC38A8 (ENSAMEG00000006433)
Mustelinae	ANCESTRAL SPECIES	6	ENSGT00390000005351	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
American mink	MODERN SPECIES	120	CNTNAP4 (ENSNVIG00000019533)	ENSNVIG00000019706	ENSNVIG00000019715	ENSNVIG00000019718	MON1B (ENSNVIG00000019735)	SYCE1L (ENSNVIG00000019796) #7	ADAMTS18 (ENSNVIG00000019828) #8	NUDT7 (ENSNVIG00000019873) #9	VAT1L (ENSNVIG00000019899) #10	CLEC3A (ENSNVIG00000019924) #11	WWOX (ENSNVIG00000019953) #12	DLRB2 (ENSNVIG00000020012) #18	CDYL2 (ENSNVIG00000020046) #19	CMC2 (ENSNVIG00000020052) #20	CENPN (ENSNVIG00000020073) #21	ATMIN (ENSNVIG00000020134) #22	C16orf46 (ENSNVIG00000020149) #23	GCSH (ENSNVIG00000020159) #24	ENSNVIG00000020171	ENSNVIG00000020185 #25	BCDO1 (ENSNVIG00000020212) #27	GAN (ENSNVIG00000020231) #28	CMIP (ENSNVIG00000020244) #29	PLCG2 (ENSNVIG00000020392) #32	SDR42E1 (ENSNVIG00000020459) #33	DHB2 (ENSNVIG00000020464) #34	MPHOSPH6 (ENSNVIG00000020481) #35	CDH13 (ENSNVIG00000020494) #36	ENSNVIG00000020595 #37	MLYCD (ENSNVIG00000020606)	OSGIN1 (ENSNVIG00000020614)
Ferret	MODERN SPECIES	203	TERF2IP (ENSMPUG00000009867)	CNTNAP4 (ENSMPUG00000009853)	ENSMPUG00000009849	MON1B (ENSMPUG00000009844)	SYCE1L (ENSMPUG00000009838) #7	ADAMTS18 (ENSMPUG00000009827) #8	NUDT7 (ENSMPUG00000009824) #9	VAT1L (ENSMPUG00000009815) #10	CLEC3A (ENSMPUG00000009809) #11	WWOX (ENSMPUG00000009803) #12	ENSMPUG00000009798	ENSMPUG00000009792 #16	DYNLRB2 (ENSMPUG00000009785) #18	CDYL2 (ENSMPUG00000009741) #19	ENSMPUG00000009732 #20	ATMIN (ENSMPUG00000009728) #22	C16orf46 (ENSMPUG00000009721) #23	GCSH (ENSMPUG00000009677) #24	PKD1L2 (ENSMPUG00000009585) #25	CENPN (ENSMPUG00000009564) #21	GAN (ENSMPUG00000009551) #28	CMIP (ENSMPUG00000009536) #29	PLCG2 (ENSMPUG00000009243) #32	SDR42E1 (ENSMPUG00000009237) #33	HSD17B2 (ENSMPUG00000009231) #34	MPHOSPH6 (ENSMPUG00000009221) #35	ENSMPUG00000020013	CDH13 (ENSMPUG00000009207) #36	ENSMPUG00000009201	HSBP1 (ENSMPUG00000009190) #37	MLYCD (ENSMPUG00000009180)
Canidae	ANCESTRAL SPECIES	11	ENSGT00940000154537	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908.a.b #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00940000157674	ENSGT00950000182901.a.a.a.b.a.a.a	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908.a.b #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Dingo	MODERN SPECIES	373	ENSCAFG00020002217	MON1B (ENSCAFG00020002232)	SYCE1L (ENSCAFG00020002241) #7	ENSCAFG00020002252 #8	ENSCAFG00020002287 #8	NUDT7 (ENSCAFG00020002293) #9	VAT1L (ENSCAFG00020002313) #10	CLEC3A (ENSCAFG00020002332) #11	WWOX (ENSCAFG00020002350) #12	MAF (ENSCAFG00020002357) #16	ENSCAFG00020002373 #18	CDYL2 (ENSCAFG00020002393) #19	ENSCAFG00020002425 #20	ENSCAFG00020002429 #21	ENSCAFG00020002431 #21	ATMIN (ENSCAFG00020002436) #22	C16orf46 (ENSCAFG00020002439) #23	GCSH (ENSCAFG00020002440) #24	PKD1L2 (ENSCAFG00020002444) #25	BCO1 (ENSCAFG00020002476) #27	GAN (ENSCAFG00020002506) #28	ENSCAFG00020002531	CMIP (ENSCAFG00020002534) #29	PLCG2 (ENSCAFG00020002593) #32	SDR42E1 (ENSCAFG00020002962) #33	HSD17B2 (ENSCAFG00020002967) #34	ENSCAFG00020002991 #35	ENSCAFG00020003011	CDH13 (ENSCAFG00020003045) #36	HSBP1 (ENSCAFG00020003283) #37	MLYCD (ENSCAFG00020003288)
Dog	MODERN SPECIES	33	CNTNAP4 (ENSCAFG00845023054)	ENSCAFG00845022974	ENSCAFG00845022925	MON1B (ENSCAFG00845022803)	ENSCAFG00845022616 #7	ADAMTS18 (ENSCAFG00845022320) #8	NUDT7 (ENSCAFG00845022170) #9	VAT1L (ENSCAFG00845022047) #10	CLEC3A (ENSCAFG00845021995) #11	WWOX (ENSCAFG00845021522) #12	MAF (ENSCAFG00845021165) #16	DYNLRB2 (ENSCAFG00845021057) #18	CDYL2 (ENSCAFG00845020878) #19	ENSCAFG00845020815	CENPN (ENSCAFG00845020660) #21	ATMIN (ENSCAFG00845020541) #22	C16orf46 (ENSCAFG00845020475) #23	ENSCAFG00845020374 #24	ENSCAFG00845020020 #25	BCO1 (ENSCAFG00845019952) #27	ENSCAFG00845019918	GAN (ENSCAFG00845019691) #28	CMIP (ENSCAFG00845018752) #29	PLCG2 (ENSCAFG00845017949) #32	SDR42E1 (ENSCAFG00845017877) #33	HSD17B2 (ENSCAFG00845017721) #34	ENSCAFG00845017638 #35	CDH13 (ENSCAFG00845017012) #36	HSBP1 (ENSCAFG00845016653) #37	MLYCD (ENSCAFG00845016601)	OSGIN1 (ENSCAFG00845016421)
Red fox	MODERN SPECIES	283														ENSVVUG00000027132	CENPN (ENSVVUG00000027131) #21	ATMIN (ENSVVUG00000027130) #22	CUNH16orf46 (ENSVVUG00000027129) #23	GCSH (ENSVVUG00000027128) #24	PKD1L2 (ENSVVUG00000027126) #25	BCO1 (ENSVVUG00000027117) #27	ENSVVUG00000027114	CMIP (ENSVVUG00000027109) #29	ENSVVUG00000026971 #32
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.l.a #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000017515.o.a	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b
Panthera	ANCESTRAL SPECIES	10	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.l.a #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00390000005351	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.l.a #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
lion	MODERN SPECIES	15	KARS1 (ENSPLOG00000017669)	TERF2IP (ENSPLOG00000017740)	CNTNAP4 (ENSPLOG00000017837)	ENSPLOG00000018704	MON1B (ENSPLOG00000018826)	SYCE1L (ENSPLOG00000018915) #7	ADAMTS18 (ENSPLOG00000018990) #8	NUDT7 (ENSPLOG00000019129) #9	VAT1L (ENSPLOG00000019173) #10	CLEC3A (ENSPLOG00000019239) #11	WWOX (ENSPLOG00000019311) #12	DYNLRB2 (ENSPLOG00000019543) #18	CDYL2 (ENSPLOG00000019594) #19	ENSPLOG00000019610 #20	ENSPLOG00000019648 #21	ATMIN (ENSPLOG00000019710) #22	C16orf46 (ENSPLOG00000019742) #23	ENSPLOG00000019766 #24	PKD1L2 (ENSPLOG00000019863) #25	BCO1 (ENSPLOG00000020093) #27	GAN (ENSPLOG00000020158) #28	ENSPLOG00000020187	CMIP (ENSPLOG00000020262) #29	PLCG2 (ENSPLOG00000020573) #32	SDR42E1 (ENSPLOG00000020620) #33	HSD17B2 (ENSPLOG00000020638) #34	MPHOSPH6 (ENSPLOG00000020668) #35	CDH13 (ENSPLOG00000020733) #36	HSBP1 (ENSPLOG00000020851) #37	MLYCD (ENSPLOG00000020875)	OSGIN1 (ENSPLOG00000020893)
leopard	MODERN SPECIES	60	CNTNAP4 (ENSPPRG00000009121)	ENSPPRG00000009426	MON1B (ENSPPRG00000009852)	SYCE1L (ENSPPRG00000010458) #7	ADAMTS18 (ENSPPRG00000010675) #8	NUDT7 (ENSPPRG00000011885) #9	VAT1L (ENSPPRG00000012251) #10	CLEC3A (ENSPPRG00000012420) #11	WWOX (ENSPPRG00000015480) #12	MAF (ENSPPRG00000016630) #16	DYNLRB2 (ENSPPRG00000017658) #18	CDYL2 (ENSPPRG00000020724) #19	ENSPPRG00000024339	CMC2 (ENSPPRG00000023624) #20	CENPN (ENSPPRG00000000055) #21	ATMIN (ENSPPRG00000000693) #22	C16orf46 (ENSPPRG00000000885) #23	ENSPPRG00000001521 #24	ENSPPRG00000003585 #25	BCO1 (ENSPPRG00000004167) #27	ENSPPRG00000019706 #28	ENSPPRG00000019730	GAN (ENSPPRG00000004887) #28	CMIP (ENSPPRG00000008468) #29	ENSPPRG00000008613	PLCG2 (ENSPPRG00000011326) #32	SDR42E1 (ENSPPRG00000011531) #33	HSD17B2 (ENSPPRG00000011942) #34	MPHOSPH6 (ENSPPRG00000012627) #35	ENSPPRG00000014633	CDH13 (ENSPPRG00000019564) #36
Tiger	MODERN SPECIES	176												DYNLRB2 (ENSPTIG00000013255) #18	CDYL2 (ENSPTIG00000009990) #19	CMC2 (ENSPTIG00000007511) #20	CENPN (ENSPTIG00000019596) #21	ATMIN (ENSPTIG00000018927) #22	C16orf46 (ENSPTIG00000018481) #23	ENSPTIG00000018330 #24	ENSPTIG00000015213 #25	BCO1 (ENSPTIG00000014390) #27	GAN (ENSPTIG00000012567) #28	CMIP (ENSPTIG00000011336) #29	PLCG2 (ENSPTIG00000006583) #32	SDR42E1 (ENSPTIG00000006116) #33	HSD17B2 (ENSPTIG00000005395) #34	MPHOSPH6 (ENSPTIG00000000518) #35	CDH13 (ENSPTIG00000019366) #36	HSBP1 (ENSPTIG00000018555) #37	MLYCD (ENSPTIG00000018312)	OSGIN1 (ENSPTIG00000016465)	NECAB2 (ENSPTIG00000015250)
Cat	MODERN SPECIES	246	CNTNAP4 (ENSFCAG00000013476)	ENSFCAG00000045934	MON1B (ENSFCAG00000004104)	SYCE1L (ENSFCAG00000018221) #7	ADAMTS18 (ENSFCAG00000010408) #8	NUDT7 (ENSFCAG00000022107) #9	VAT1L (ENSFCAG00000004729) #10	CLEC3A (ENSFCAG00000028303) #11	WWOX (ENSFCAG00000022130) #12	MAF (ENSFCAG00000042273) #16	DYNLRB2 (ENSFCAG00000004084) #18	CDYL2 (ENSFCAG00000014748) #19	ENSFCAG00000022025	CMC2 (ENSFCAG00000004977) #20	CENPN (ENSFCAG00000035603) #21	ATMIN (ENSFCAG00000004979) #22	C16orf46 (ENSFCAG00000040782) #23	ENSFCAG00000013038 #24	PKD1L2 (ENSFCAG00000004981) #25	BCO1 (ENSFCAG00000004984) #27	GAN (ENSFCAG00000028273) #28	ENSFCAG00000036536	CMIP (ENSFCAG00000004986) #29	PLCG2 (ENSFCAG00000004987) #32	SDR42E1 (ENSFCAG00000024343) #33	HSD17B2 (ENSFCAG00000004989) #34	MPHOSPH6 (ENSFCAG00000004990) #35	CDH13 (ENSFCAG00000004387) #36	ENSFCAG00000047154	HSBP1 (ENSFCAG00000034194) #37	MLYCD (ENSFCAG00000011551)
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000165352	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Equus	ANCESTRAL SPECIES	20	ENSGT00940000165352	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Horse	MODERN SPECIES	22	CNTNAP4 (ENSECAG00000011893)	ENSECAG00000059274	ENSECAG00000032946	ENSECAG00000030127	MON1B (ENSECAG00000015777)	ADAMTS18 (ENSECAG00000019006) #8	NUDT7 (ENSECAG00000009401) #9	VAT1L (ENSECAG00000009839) #10	CLEC3A (ENSECAG00000014778) #11	WWOX (ENSECAG00000016036) #12	MAF (ENSECAG00000033482) #16	DYNLRB2 (ENSECAG00000018830) #18	CDYL2 (ENSECAG00000019160) #19	CMC2 (ENSECAG00000000963) #20	CENPN (ENSECAG00000001041) #21	ATMIN (ENSECAG00000011923) #22	C3H16orf46 (ENSECAG00000015354) #23	GCSH (ENSECAG00000026862) #24	ENSECAG00000015980 #25	BCO1 (ENSECAG00000000280) #27	GAN (ENSECAG00000012155) #28	ENSECAG00000033092	CMIP (ENSECAG00000013542) #29	PLCG2 (ENSECAG00000000291) #32	SDR42E1 (ENSECAG00000011349) #33	HSD17B2 (ENSECAG00000012114) #34	CDH13 (ENSECAG00000021162) #36	MLYCD (ENSECAG00000022837)	OSGIN1 (ENSECAG00000023023)	NECAB2 (ENSECAG00000023746)	SLC38A8 (ENSECAG00000003354)
Donkey	MODERN SPECIES	20	CNTNAP4 (ENSEASG00005013505)	ENSEASG00005024465	ENSEASG00005030506	MON1B (ENSEASG00005013527)	SYCE1L (ENSEASG00005032860) #7	ADAMTS18 (ENSEASG00005013537) #8	NUDT7 (ENSEASG00005013555) #9	VAT1L (ENSEASG00005013560) #10	CLEC3A (ENSEASG00005037444) #11	WWOX (ENSEASG00005013576) #12	MAF (ENSEASG00005031499) #16	DYNLRB2 (ENSEASG00005013585) #18	CDYL2 (ENSEASG00005013589) #19	CMC2 (ENSEASG00005023757) #20	CENPN (ENSEASG00005032181) #21	ATMIN (ENSEASG00005013597) #22	C16orf46 (ENSEASG00005028489) #23	GCSH (ENSEASG00005035967) #24	PKD1L2 (ENSEASG00005013610) #25	BCO1 (ENSEASG00005013625) #27	GAN (ENSEASG00005013631) #28	CMIP (ENSEASG00005013643) #29	PLCG2 (ENSEASG00005013661) #32	SDR42E1 (ENSEASG00005030350) #33	HSD17B2 (ENSEASG00005013674) #34	MPHOSPH6 (ENSEASG00005027868) #35	CDH13 (ENSEASG00005013691) #36	HSBP1 (ENSEASG00005034692) #37	MLYCD (ENSEASG00005013697)	OSGIN1 (ENSEASG00005013700)	NECAB2 (ENSEASG00005013703)
Chiroptera	ANCESTRAL SPECIES	21	ENSGT00390000005351	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00390000005351	ENSGT00940000157674	ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Microbat	DUPLICATION
Microbat	MODERN SPECIES	972	TERF2IP (ENSMLUG00000015124)	CNTNAP4 (ENSMLUG00000012921)	ENSMLUG00000022726	MON1B (ENSMLUG00000003775)	ENSMLUG00000026103 #7	ADAMTS18 (ENSMLUG00000009268) #8	NUDT7 (ENSMLUG00000009335) #9	VAT1L (ENSMLUG00000009345) #10	CLEC3A (ENSMLUG00000009365) #11	WWOX (ENSMLUG00000009368) #12	ENSMLUG00000025894	DYNLRB2 (ENSMLUG00000001399) #18	CDYL2 (ENSMLUG00000001407) #19	CMC2 (ENSMLUG00000008494) #20	CENPN (ENSMLUG00000005884) #21	ENSMLUG00000005888 #22	C16orf46 (ENSMLUG00000005894) #23	GCSH (ENSMLUG00000005783) #24	ENSMLUG00000025067 #25	ENSMLUG00000028202	BCO1 (ENSMLUG00000014885) #27	GAN (ENSMLUG00000014891) #28	CMIP (ENSMLUG00000014899) #29	PLCG2 (ENSMLUG00000014908) #32	SDR42E1 (ENSMLUG00000015708) #33	HSD17B2 (ENSMLUG00000015714) #34	ENSMLUG00000000268 #35	ENSMLUG00000007609 #36	HSBP1 (ENSMLUG00000007636) #37	MLYCD (ENSMLUG00000002980)	OSGIN1 (ENSMLUG00000002987)
Microbat	MODERN SPECIES	960	SEMA6D (ENSMLUG00000007932)	ENSMLUG00000030579	SLC24A5 (ENSMLUG00000006760)	MYEF2 (ENSMLUG00000006781)	CTXN2 (ENSMLUG00000025495)	SLC12A1 (ENSMLUG00000006815)	DUT (ENSMLUG00000006842)	ENSMLUG00000026203	FBN1 (ENSMLUG00000006857)	CEP152 (ENSMLUG00000012896)	EID1 (ENSMLUG00000027610)	SHC4 (ENSMLUG00000012913)	ENSMLUG00000028542	SECISBP2L (ENSMLUG00000012918)	COPS2 (ENSMLUG00000013760)	ENSMLUG00000025580 #22	GALK2 (ENSMLUG00000013767)	FGF7 (ENSMLUG00000010428)	DTWD1 (ENSMLUG00000001784)	ATP8B4 (ENSMLUG00000008270)	SLC27A2 (ENSMLUG00000005760)	HDC (ENSMLUG00000005768)	GABPB1 (ENSMLUG00000005780)	USP8 (ENSMLUG00000000389)	USP50 (ENSMLUG00000006756)	ENSMLUG00000024658	TRPM7 (ENSMLUG00000000187)	SPPL2A (ENSMLUG00000016737)	AP4E1 (ENSMLUG00000009792)	TNFAIP8L3 (ENSMLUG00000009833)	CYP19A1 (ENSMLUG00000009854)
Greater horseshoe bat	MODERN SPECIES	6	TERF2IP (ENSRFEG00010015304)	CNTNAP4 (ENSRFEG00010007251)	ENSRFEG00010007398	ENSRFEG00010007447	MON1B (ENSRFEG00010007521)	ADAMTS18 (ENSRFEG00010007780) #8	NUDT7 (ENSRFEG00010008000) #9	VAT1L (ENSRFEG00010008062) #10	CLEC3A (ENSRFEG00010008108) #11	WWOX (ENSRFEG00010008177) #12	MAF (ENSRFEG00010008255) #16	DYNLRB2 (ENSRFEG00010008310) #18	CDYL2 (ENSRFEG00010008362) #19	CMC2 (ENSRFEG00010008437) #20	ENSRFEG00010008493 #21	ATMIN (ENSRFEG00010008777) #22	C16orf46 (ENSRFEG00010008835) #23	GCSH (ENSRFEG00010008913) #24	BCO1 (ENSRFEG00010008967) #27	GAN (ENSRFEG00010009014) #28	CMIP (ENSRFEG00010009132) #29	PLCG2 (ENSRFEG00010009626) #32	SDR42E1 (ENSRFEG00010009698) #33	HSD17B2 (ENSRFEG00010009719) #34	MPHOSPH6 (ENSRFEG00010009737) #35	CDH13 (ENSRFEG00010009815) #36	ENSRFEG00010010056 #37	MLYCD (ENSRFEG00010010090)	OSGIN1 (ENSRFEG00010010128)	NECAB2 (ENSRFEG00010010165)	SLC38A8 (ENSRFEG00010010227)
Megabat	MODERN SPECIES	2022															CENPN (ENSPVAG00000009951) #21	ATMIN (ENSPVAG00000009952) #22	C16orf46 (ENSPVAG00000009953) #23	GCSH (ENSPVAG00000009956) #24	PKD1L2 (ENSPVAG00000009961) #25
Atlantogenata	ANCESTRAL SPECIES	52		ENSGT00940000165693	ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Afrotheria	ANCESTRAL SPECIES	50			ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Afrotheria_a	ANCESTRAL SPECIES	94			ENSGT00390000006665.b	ENSGT00390000017352.d #7	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000006293 #37	ENSGT00390000005410	ENSGT00390000006658.b	ENSGT00950000183131.b.b
Elephant	MODERN SPECIES	458			MON1B (ENSLAFG00000028110)	ENSLAFG00000029845 #7	ADAMTS18 (ENSLAFG00000014632) #8	NUDT7 (ENSLAFG00000015102) #9	VAT1L (ENSLAFG00000002783) #10	CLEC3A (ENSLAFG00000021345) #11	ENSLAFG00000012515	ENSLAFG00000032762 #12	MAF (ENSLAFG00000003211) #16	DYNLRB2 (ENSLAFG00000018336) #18	CDYL2 (ENSLAFG00000018183) #19	CMC2 (ENSLAFG00000004378) #20	CENPN (ENSLAFG00000004382) #21	ATMIN (ENSLAFG00000004383) #22	C16orf46 (ENSLAFG00000014008) #23	GCSH (ENSLAFG00000015586) #24	ENSLAFG00000013094 #25	BCO1 (ENSLAFG00000013100) #27	GAN (ENSLAFG00000013109) #28	CMIP (ENSLAFG00000013907) #29	PLCG2 (ENSLAFG00000001815) #32	SDR42E1 (ENSLAFG00000007085) #33	ENSLAFG00000001816 #34	MPHOSPH6 (ENSLAFG00000004842) #35	CDH13 (ENSLAFG00000000367) #36	ENSLAFG00000014112 #37	MLYCD (ENSLAFG00000008543)	OSGIN1 (ENSLAFG00000029645)	NECAB2 (ENSLAFG00000006053)
Hyrax	MODERN SPECIES	5012															CENPN (ENSPCAG00000015534) #21	ATMIN (ENSPCAG00000015604) #22
Tenrec	MODERN SPECIES	638																ATMIN (ENSETEG00000018568) #22
Xenarthra	ANCESTRAL SPECIES	593														ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28
Armadillo	DUPLICATION
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	2390											SLC15A2 (ENSDNOG00000015140)	ILDR1 (ENSDNOG00000003909)	ENSDNOG00000001920	CASR (ENSDNOG00000015243)	ENSDNOG00000033555	ENSDNOG00000047231 #22	MIX23 (ENSDNOG00000005535)	FAM162A (ENSDNOG00000048394)	WDR5B (ENSDNOG00000005558)	KPNA1 (ENSDNOG00000005561)	DTX3L (ENSDNOG00000008031)	PARP14 (ENSDNOG00000015400)	HSPBAP1 (ENSDNOG00000034751)	SLC49A4 (ENSDNOG00000015403)	ENSDNOG00000014815
Armadillo	MODERN SPECIES	3117																ENSDNOG00000040448 #22	STC2 (ENSDNOG00000035052)
Armadillo	MODERN SPECIES	603													DYNLRB2 (ENSDNOG00000041975) #18	CDYL2 (ENSDNOG00000000515) #19	ENSDNOG00000004354	ENSDNOG00000042547 #22	C16orf46 (ENSDNOG00000036955) #23	GCSH (ENSDNOG00000017870) #24	PKD1L2 (ENSDNOG00000002410) #25	BCO1 (ENSDNOG00000000413) #27	GAN (ENSDNOG00000000417) #28
Sloth	MODERN SPECIES	5449																ATMIN (ENSCHOG00000009648) #22	ENSCHOG00000009668 #23
Marsupialia	ANCESTRAL SPECIES	15	ENSGT00900000143268	ENSGT00940000155823.B	ENSGT00940000158843	ENSGT00440000037341.a	ENSGT00940000160910	ENSGT00390000017627.a	ENSGT00940000159330	ENSGT00950000183095.a.b.a.b.b	ENSGT00390000006205.a	ENSGT00440000039029	ENSGT00940000160736	ENSGT00940000159084	ENSGT00500000045333	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.wb #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000005410	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.b	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.b
Marsupialia_b	ANCESTRAL SPECIES	9	ENSGT00900000143268	ENSGT00940000155823.B	ENSGT00940000158843	ENSGT00440000037341.a	ENSGT00940000160910	ENSGT00390000017627.a	ENSGT00940000159330	ENSGT00950000183095.a.b.a.b.b	ENSGT00390000006205.a	ENSGT00440000039029	ENSGT00940000160736	ENSGT00940000159084	ENSGT00500000045333	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.wb #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000005410	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.b	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.b
Diprotodontia	ANCESTRAL SPECIES	2	ENSGT00900000143268	ENSGT00940000155823.B	ENSGT00940000158843	ENSGT00440000037341.a	ENSGT00940000160910	ENSGT00390000017627.a	ENSGT00940000159330	ENSGT00950000183095.a.b.a.b.b	ENSGT00390000006205.a	ENSGT00440000039029	ENSGT00940000160736	ENSGT00940000159084	ENSGT00500000045333	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.vb.a #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000005410	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.b	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.b
Diprotodontia_a	ANCESTRAL SPECIES	2	ENSGT00900000143268	ENSGT00940000155823.B	ENSGT00940000158843	ENSGT00440000037341.a	ENSGT00940000160910	ENSGT00390000017627.a	ENSGT00940000159330	ENSGT00950000183095.a.b.a.b.b	ENSGT00390000006205.a	ENSGT00440000039029	ENSGT00940000160736	ENSGT00940000159084	ENSGT00500000045333.b	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666.vb.a #24	ENSGT00940000165999	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000005410	ENSGT00390000006293.y #37
Common wonbat	MODERN SPECIES	574	FAM98A (ENSVURG00010016822)	ENSVURG00010016813	ENSVURG00010016810	ENSVURG00010016805	CRIM1 (ENSVURG00010016792)	FEZ2 (ENSVURG00010016777)	VIT (ENSVURG00010016752)	STRN (ENSVURG00010016708)	HEATR5B (ENSVURG00010016661)	GPATCH11 (ENSVURG00010016627)	ENSVURG00010016594	SULT6B1 (ENSVURG00010016574)	ENSVURG00010016569	CMC2 (ENSVURG00010016565) #20	CENPN (ENSVURG00010016556) #21	ATMIN (ENSVURG00010016546) #22	ENSVURG00010016541 #23	ENSVURG00010016533	ENSVURG00010016487 #25	BCO1 (ENSVURG00010016469) #27	GAN (ENSVURG00010016455) #28	CMIP (ENSVURG00010016430) #29	ENSVURG00010016418	PLCG2 (ENSVURG00010016355) #32	SDR42E1 (ENSVURG00010016334) #33	HSD17B2 (ENSVURG00010016318) #34	MPHOSPH6 (ENSVURG00010016311) #35	CDH13 (ENSVURG00010016295) #36	ENSVURG00010016249	ENSVURG00010016238	ENSVURG00010016224 #37
koala	MODERN SPECIES	47		ENSPCIG00000035478	ENSPCIG00000032366	CRIM1 (ENSPCIG00000010964)	FEZ2 (ENSPCIG00000010967)	ENSPCIG00000032789	ENSPCIG00000010969	STRN (ENSPCIG00000010971)	HEATR5B (ENSPCIG00000010975)	GPATCH11 (ENSPCIG00000010983)	ENSPCIG00000010984	SULT6B1 (ENSPCIG00000010986)	ENSPCIG00000010987	CMC2 (ENSPCIG00000032133) #20	CENPN (ENSPCIG00000010989) #21	ATMIN (ENSPCIG00000010990) #22	ENSPCIG00000010992 #23	ENSPCIG00000010994 #24	ENSPCIG00000010998 #25	BCO1 (ENSPCIG00000011002) #27	GAN (ENSPCIG00000011004) #28	CMIP (ENSPCIG00000015315) #29	PLCG2 (ENSPCIG00000015304) #32	SDR42E1 (ENSPCIG00000015298) #33	HSD17B2 (ENSPCIG00000010747) #34	ENSPCIG00000036337	MPHOSPH6 (ENSPCIG00000010743) #35	ENSPCIG00000010739	ENSPCIG00000016009	CDH13 (ENSPCIG00000011670) #36	MLYCD (ENSPCIG00000009581)
Wallaby	MODERN SPECIES	7375																ATMIN (ENSMEUG00000014128) #22
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000027521	ENSSHAG00000015127	ENSSHAG00000023321	ENSSHAG00000023790	ENSSHAG00000028955	ENSSHAG00000009712	ENSSHAG00000010867	VIT (ENSSHAG00000012061)	STRN (ENSSHAG00000012733)	HEATR5B (ENSSHAG00000013525)	GPATCH11 (ENSSHAG00000023702)	ENSSHAG00000001447	SULT6B1 (ENSSHAG00000004594)	ENSSHAG00000024600	ENSSHAG00000023635 #20	ENSSHAG00000020527 #22	ENSSHAG00000026628 #23	GCSH (ENSSHAG00000029630) #24	ENSSHAG00000005909 #25	BCO1 (ENSSHAG00000007696) #27	GAN (ENSSHAG00000008348) #28	ENSSHAG00000010454	PLCG2 (ENSSHAG00000011637) #32	SDR42E1 (ENSSHAG00000012555) #33	HSD17B2 (ENSSHAG00000031931) #34	ENSSHAG00000026367	MPHOSPH6 (ENSSHAG00000013630) #35	CDH13 (ENSSHAG00000008933) #36	ENSSHAG00000030969	ENSSHAG00000002202	ENSSHAG00000026391
Opossum	MODERN SPECIES		ENSMODG00000027462	ENSMODG00000029800	ENSMODG00000044237	ENSMODG00000049199	CRIM1 (ENSMODG00000015395)	FEZ2 (ENSMODG00000015390)	VIT (ENSMODG00000015382)	STRN (ENSMODG00000015376)	HEATR5B (ENSMODG00000015367)	GPATCH11 (ENSMODG00000015289)	ENSMODG00000015286	SULT6B1 (ENSMODG00000015278)	ENSMODG00000048395	CMC2 (ENSMODG00000025763) #20	CENPN (ENSMODG00000015271) #21	ATMIN (ENSMODG00000015266) #22	ENSMODG00000015261 #23	ENSMODG00000050374	GCSH (ENSMODG00000039999) #24	BCO1 (ENSMODG00000015217) #27	GAN (ENSMODG00000015214) #28	CMIP (ENSMODG00000015208) #29	PLCG2 (ENSMODG00000015196) #32	SDR42E1 (ENSMODG00000015169) #33	HSD17B2 (ENSMODG00000015163) #34	ENSMODG00000023205	MPHOSPH6 (ENSMODG00000015131) #35	ENSMODG00000042788	CDH13 (ENSMODG00000015029) #36	ENSMODG00000040958	MLYCD (ENSMODG00000014843)
Platypus	MODERN SPECIES	2	LRP6 (ENSOANG00000006877)	ENSOANG00000000732	BORCS5 (ENSOANG00000046805)	DUSP16 (ENSOANG00000000734)	CREBL2 (ENSOANG00000040260)	GPR19 (ENSOANG00000046830)	ENSOANG00000045776	ENSOANG00000045395	ETV6 (ENSOANG00000014578)	ENSOANG00000045152	LUC7L2 (ENSOANG00000002993)	FMC1 (ENSOANG00000037156)	TTC26 (ENSOANG00000005994)	ENSOANG00000039813 #20	CENPN (ENSOANG00000011086) #21	ATMIN (ENSOANG00000051099) #22	ENSOANG00000050825	ENSOANG00000011089 #24	SLC6A2 (ENSOANG00000011092)	LPCAT2 (ENSOANG00000011096)	MMP2 (ENSOANG00000011098)	ENSOANG00000029378	IRX5 (ENSOANG00000044475)	ENSOANG00000045495	ENSOANG00000050066	ENSOANG00000013407	RPGRIP1L (ENSOANG00000013406)	AKTIP (ENSOANG00000013405)	RBL2 (ENSOANG00000013404)	CHD9 (ENSOANG00000013401)	TOX3 (ENSOANG00000013400)
Sauria	ANCESTRAL SPECIES	14	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT01060000249485	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00940000159432.C	ENSGT00940000154805.b.g	ENSGT00940000161867	ENSGT00950000183008.a.a.b	ENSGT00940000160959	ENSGT00940000154606	ENSGT00940000161906	ENSGT00950000182893.a.b	ENSGT00740000115581.e	ENSGT00940000158278	ENSGT00940000161681	ENSGT00390000007438	ENSGT00710000106790	ENSGT00940000159567
Archelosauria	ANCESTRAL SPECIES	16	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT01060000249485	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00940000164357	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000005410
Archosauria	ANCESTRAL SPECIES	14	ENSGT00530000063956.b.b	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00940000161906	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000164357	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b
Aves	ANCESTRAL SPECIES	22	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553 #8	ENSGT00940000165319	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00940000161906	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000164357	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b
Neognathae	ANCESTRAL SPECIES	13	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553 #8	ENSGT00940000165319	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00940000161906	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212 #35
Galloanserae	ANCESTRAL SPECIES	12	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553 #8	ENSGT00940000165319	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00940000161906	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212 #35
Phasianidae	ANCESTRAL SPECIES	12	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553 #8	ENSGT00940000165319	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00940000161906	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000005410
Japanese quail	MODERN SPECIES	2	CDH5 (ENSCJPG00005014650)	CDH11 (ENSCJPG00005014655)	CDH8 (ENSCJPG00005014665)	ADAMTS18 (ENSCJPG00005014678) #8	ENSCJPG00005014680	NUDT7 (ENSCJPG00005014681) #9	VAT1L (ENSCJPG00005014682) #10	CLEC3A (ENSCJPG00005014683) #11	WWOX (ENSCJPG00005014684) #12	ENSCJPG00005014685 #12	MAF (ENSCJPG00005014686) #16	DYNLRB2 (ENSCJPG00005014691) #18	CDYL2 (ENSCJPG00005014692) #19	ENSCJPG00005014693 #20	CENPN (ENSCJPG00005014694) #21	ATMIN (ENSCJPG00005014695) #22	PPP1R3E (ENSCJPG00005014696)	ENSCJPG00005014697	PKD1L2 (ENSCJPG00005014698) #25	BCO1 (ENSCJPG00005014699) #27	GAN (ENSCJPG00005014700) #28	CMIP (ENSCJPG00005014701) #29	PLCG2 (ENSCJPG00005014704) #32	SDR42E1 (ENSCJPG00005014705) #33	HSD17B2 (ENSCJPG00005014706) #34	ENSCJPG00005014708	ENSCJPG00005014709	ENSCJPG00005014710	MPHOSPH6 (ENSCJPG00005014711) #35	CDH13 (ENSCJPG00005014715) #36	MLYCD (ENSCJPG00005014717)
Phasianidae_b	ANCESTRAL SPECIES	14	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553 #8	ENSGT00940000165319	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00940000161906	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000005410
Turkey	MODERN SPECIES	4	ENSMGAG00000018466	ENSMGAG00000000917	ENSMGAG00000000918	TRADD (ENSMGAG00000018981)	ENSMGAG00000000909	ENSMGAG00000000886	ENSMGAG00000000906	HSDL1 (ENSMGAG00000000871)	ENSMGAG00000000862	ENSMGAG00000000801	MBTPS1 (ENSMGAG00000000805)	OSGIN1 (ENSMGAG00000000787)	GAN (ENSMGAG00000006826) #28	ENSMGAG00000006759 #25	ENSMGAG00000006799 #27	ATMIN (ENSMGAG00000006738) #22	ENSMGAG00000006868 #19	ENSMGAG00000006719 #20	ENSMGAG00000006725 #21	DYNLRB2 (ENSMGAG00000006708) #18	ENSMGAG00000018698 #16	ENSMGAG00000006687 #12	ENSMGAG00000019485	ENSMGAG00000006683 #11	ENSMGAG00000006649 #10	ENSMGAG00000019886 #9	ENSMGAG00000006670	ENSMGAG00000020260 #8	CMIP (ENSMGAG00000006844) #29	PLCG2 (ENSMGAG00000006882) #32	SDR42E1 (ENSMGAG00000006936) #33
Chicken	MODERN SPECIES	2	BEAN1 (ENSGALG00010007243)	CDH5 (ENSGALG00010007270)	CDH11 (ENSGALG00010007302)	CDH8 (ENSGALG00010007678)	ADAMTS18 (ENSGALG00010007698) #8	ENSGALG00010007735	NUDT7 (ENSGALG00010007765) #9	VAT1L (ENSGALG00010007767) #10	CLEC3A (ENSGALG00010007772) #11	WWOX (ENSGALG00010007789) #12	MAF (ENSGALG00010007800) #16	DYNLRB2 (ENSGALG00010007806) #18	CDYL2 (ENSGALG00010007817) #19	CMC2 (ENSGALG00010007847) #20	CENPN (ENSGALG00010007859) #21	ATMIN (ENSGALG00010007862) #22	PPP1R3E (ENSGALG00010009779)	GCSH (ENSGALG00010007869) #24	PKD1L2 (ENSGALG00010007876) #25	BCO1 (ENSGALG00010007880) #27	GAN (ENSGALG00010007324) #28	CMIP (ENSGALG00010007374) #29	PLCG2 (ENSGALG00010007393) #32	SDR42E1 (ENSGALG00010007403) #33	HSD17B2 (ENSGALG00010007439) #34	NAT (ENSGALG00010007432)	PNAT3 (ENSGALG00010007436)	PNAT10 (ENSGALG00010007465)	MPHOSPH6 (ENSGALG00010007500) #35	CDH13 (ENSGALG00010007529) #36	MLYCD (ENSGALG00010007544)
Anatidae	ANCESTRAL SPECIES	17	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553 #8	ENSGT00940000165319	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00940000161906	ENSGT00390000011666 #24	ENSGT00990000204256	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212 #35
Pink-footed goose	MODERN SPECIES	28	ENSABRG00000010374	CDH5 (ENSABRG00000010423)	CDH11 (ENSABRG00000010473)	CDH8 (ENSABRG00000010544)	ADAMTS18 (ENSABRG00000010647) #8	ENSABRG00000010910	NUDT7 (ENSABRG00000010920) #9	VAT1L (ENSABRG00000010924) #10	CLEC3A (ENSABRG00000010932) #11	WWOX (ENSABRG00000010937) #12	MAF (ENSABRG00000010950) #16	DYNLRB2 (ENSABRG00000010978) #18	CDYL2 (ENSABRG00000011016) #19	CMC2 (ENSABRG00000011023) #20	CENPN (ENSABRG00000011037) #21	ATMIN (ENSABRG00000011044) #22	ENSABRG00000011053 #23	PPP1R3E (ENSABRG00000011069)	PKD1L2 (ENSABRG00000011097) #25	BCO1 (ENSABRG00000011129) #27	GAN (ENSABRG00000011136) #28
Duck	MODERN SPECIES	3	CDH11 (ENSAPLG00000015154)	ENSAPLG00000027372	CDH8 (ENSAPLG00000007743)	ADAMTS18 (ENSAPLG00000008153) #8	ENSAPLG00000008904	NUDT7 (ENSAPLG00000028392) #9	VAT1L (ENSAPLG00000009070) #10	CLEC3A (ENSAPLG00000022572) #11	WWOX (ENSAPLG00000009300) #12	ENSAPLG00000026540 #12	MAF (ENSAPLG00000019538) #16	DYNLRB2 (ENSAPLG00000009314) #18	CDYL2 (ENSAPLG00000009316) #19	CMC2 (ENSAPLG00000009535) #20	CENPN (ENSAPLG00000009538) #21	ATMIN (ENSAPLG00000009633) #22	ENSAPLG00000027134	PPP1R3E (ENSAPLG00000020132)	GCSH (ENSAPLG00000021043) #24	ENSAPLG00000017829	ENSAPLG00000016688 #25	BCO1 (ENSAPLG00000010038) #27	GAN (ENSAPLG00000010354) #28	CMIP (ENSAPLG00000010524) #29	PLCG2 (ENSAPLG00000010652) #32	SDR42E1 (ENSAPLG00000001581) #33	HSD17B2 (ENSAPLG00000001835) #34	ENSAPLG00000002080	ENSAPLG00000002085	ENSAPLG00000002088	MPHOSPH6 (ENSAPLG00000018311) #35
Neognathae_b	ANCESTRAL SPECIES	15	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553 #8	ENSGT00940000165319	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00940000161906	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273.mb #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000005410
Neognathae_c	ANCESTRAL SPECIES	18	ENSGT00940000160432	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553 #8	ENSGT00940000165319	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00940000161906	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273.mb.b #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000005410
Kakapo	DUPLICATION
Kakapo	MODERN SPECIES	4	ENSSHBG00005000297	ENSSHBG00005000298	ENSSHBG00005000301	ENSSHBG00005000303	ENSSHBG00005000305	ENSSHBG00005000308	ENSSHBG00005000309	ENSSHBG00005000312	ENSSHBG00005000314	ENSSHBG00005000317 #16	ENSSHBG00005000320	ENSSHBG00005000322 #19	ENSSHBG00005000324	ENSSHBG00005000326	ENSSHBG00005000328	ENSSHBG00005000330 #22	ENSSHBG00005000334	ENSSHBG00005000339	ENSSHBG00005000343 #27	ENSSHBG00005000344	ENSSHBG00005000347 #28	ENSSHBG00005000360 #29	ENSSHBG00005000369 #36	ENSSHBG00005000370	ENSSHBG00005000372	ENSSHBG00005000373	ENSSHBG00005000375	ENSSHBG00005000377	ENSSHBG00005000380	ENSSHBG00005000384	ENSSHBG00005000386
Kakapo	MODERN SPECIES	19	ENSSHBG00005010374	ENSSHBG00005010357	ENSSHBG00005010343	CDH8 (ENSSHBG00005010317)	ADAMTS18 (ENSSHBG00005010200) #8	ENSSHBG00005010159	NUDT7 (ENSSHBG00005010142) #9	VAT1L (ENSSHBG00005010126) #10	CLEC3A (ENSSHBG00005010105) #11	WWOX (ENSSHBG00005010085) #12	ENSSHBG00005009983 #16	DYNLRB2 (ENSSHBG00005009960) #18	ENSSHBG00005009937 #19	CMC2 (ENSSHBG00005009923) #20	CENPN (ENSSHBG00005009907) #21	ENSSHBG00005009901 #22	ENSSHBG00005009897	GCSH (ENSSHBG00005000943) #24	PKD1L2 (ENSSHBG00005000921) #25	ENSSHBG00005000904 #27	ENSSHBG00005013352 #28	ENSSHBG00005013341 #29	PLCG2 (ENSSHBG00005012588) #32	SDR42E1 (ENSSHBG00005012498) #33	HSD17B2 (ENSSHBG00005012293) #34	ENSSHBG00005012234	ENSSHBG00005012218	ENSSHBG00005012207	MPHOSPH6 (ENSSHBG00005012198) #35	ENSSHBG00005012175 #36	MLYCD (ENSSHBG00005012147)
Golden eagle	MODERN SPECIES	25	ENSACCG00020000478	CDH5 (ENSACCG00020000457)	CDH11 (ENSACCG00020000432)	CDH8 (ENSACCG00020004323)	ADAMTS18 (ENSACCG00020004303) #8	ENSACCG00020004275	NUDT7 (ENSACCG00020004265) #9	VAT1L (ENSACCG00020004257) #10	CLEC3A (ENSACCG00020004252) #11	WWOX (ENSACCG00020004239) #12	MAF (ENSACCG00020004213) #16	DYNLRB2 (ENSACCG00020004205) #18	CDYL2 (ENSACCG00020004193) #19	CMC2 (ENSACCG00020004182) #20	CENPN (ENSACCG00020004175) #21	ATMIN (ENSACCG00020004163) #22	ENSACCG00020004154	GCSH (ENSACCG00020004146) #24	PKD1L2 (ENSACCG00020004126) #25	ENSACCG00020004105 #28	ENSACCG00020004091 #28	CMIP (ENSACCG00020004071) #29	PLCG2 (ENSACCG00020003960) #32	SDR42E1 (ENSACCG00020003812) #33	HSD17B2 (ENSACCG00020003783) #34	ENSACCG00020003752	ENSACCG00020003741	ENSACCG00020003736	MPHOSPH6 (ENSACCG00020003725) #35	CDH13 (ENSACCG00020003709) #36	MLYCD (ENSACCG00020003692)
Passeriformes	ANCESTRAL SPECIES	13	ENSGT00940000162283	ENSGT00940000160309	ENSGT00390000004596	ENSGT00940000156939	ENSGT00390000004554	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000001622	ENSGT00950000185219	ENSGT00950000182872.f.b.a	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00960000189518	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00940000161906	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273.mb #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212 #35	ENSGT00940000155218.B #36	ENSGT00390000005410
Passeriformes_d	ANCESTRAL SPECIES	13	ENSGT00940000162283	ENSGT00940000160309	ENSGT00390000004596	ENSGT00940000156939	ENSGT00390000004554	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000001622	ENSGT00950000185219	ENSGT00950000182872.f.b.a	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00960000189518	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00940000161906	ENSGT00940000165999	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273.mb #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212 #35	ENSGT00940000155218.B #36
Passeriformes_g	ANCESTRAL SPECIES	17	ENSGT00940000162283	ENSGT00940000160309	ENSGT00390000004596	ENSGT00940000156939	ENSGT00390000004554	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000001622	ENSGT00950000185219	ENSGT00950000182872.f.b.a	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00960000189518	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00940000161906	ENSGT00940000165999	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273.mb #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212 #35	ENSGT00940000155218.B #36
Medium ground finch	MODERN SPECIES	46	KIFC3 (ENSGFOG00000012217)	ENSGFOG00000012230	ZNF319 (ENSGFOG00000012238)	USB1 (ENSGFOG00000012240)	MMP15 (ENSGFOG00000012247)	CFAP20 (ENSGFOG00000012251)	CSNK2A2 (ENSGFOG00000012255)	GINS3 (ENSGFOG00000012261)	NDRG4 (ENSGFOG00000012266)	WWOX (ENSGFOG00000012276) #12	ENSGFOG00000012277 #12	ENSGFOG00000012284 #16	CDYL2 (ENSGFOG00000012287) #19	CMC2 (ENSGFOG00000012291) #20	CENPN (ENSGFOG00000012298) #21	ATMIN (ENSGFOG00000012302) #22
Passeroidea	ANCESTRAL SPECIES	17	ENSGT00940000162283	ENSGT00940000160309	ENSGT00390000004596	ENSGT00940000156939	ENSGT00390000004554	ENSGT00390000004215.a.b.b.c.a	ENSGT00390000001622	ENSGT00950000185219	ENSGT00950000182872.f.b.a	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00960000189518	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00940000161906	ENSGT00940000165999	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273.mb #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212 #35	ENSGT00940000155218.B #36
Zebra finch	MODERN SPECIES	2	KIFC3 (ENSTGUG00000004843)	ENSTGUG00000004800	ZNF319 (ENSTGUG00000023895)	USB1 (ENSTGUG00000004792)	MMP15 (ENSTGUG00000004764)	CFAP20 (ENSTGUG00000004759)	CSNK2A2 (ENSTGUG00000004713)	GINS3 (ENSTGUG00000022921)	NDRG4 (ENSTGUG00000026031)	WWOX (ENSTGUG00000004614) #12	MAF (ENSTGUG00000004610) #16	ENSTGUG00000022634	CDYL2 (ENSTGUG00000004589) #19	CMC2 (ENSTGUG00000022858) #20	CENPN (ENSTGUG00000004579) #21	ATMIN (ENSTGUG00000004575) #22	PPP1R3E (ENSTGUG00000023284)	BCO1 (ENSTGUG00000004509) #27	GCSH (ENSTGUG00000004561) #24	PKD1L2 (ENSTGUG00000004529) #25	GAN (ENSTGUG00000004495) #28	CMIP (ENSTGUG00000004472) #29	PLCG2 (ENSTGUG00000004405) #32	SDR42E1 (ENSTGUG00000004400) #33	HSD17B2 (ENSTGUG00000004388) #34	nat4 (ENSTGUG00000004382)	nat2 (ENSTGUG00000004387)	ENSTGUG00000021722	MPHOSPH6 (ENSTGUG00000025891) #35	CDH13 (ENSTGUG00000004357) #36	MLYCD (ENSTGUG00000004352)
Common canary	MODERN SPECIES	14	USB1 (ENSSCAG00000006388)	MMP15 (ENSSCAG00000006393)	CFAP20 (ENSSCAG00000006401)	ENSSCAG00000006403	CSNK2A2 (ENSSCAG00000006420)	GINS3 (ENSSCAG00000006492)	ENSSCAG00000006496	NDRG4 (ENSSCAG00000006499)	WWOX (ENSSCAG00000006512) #12	ENSSCAG00000006519 #12	MAF (ENSSCAG00000006531) #16	ENSSCAG00000006546	CDYL2 (ENSSCAG00000006552) #19	CMC2 (ENSSCAG00000006557) #20	CENPN (ENSSCAG00000006563) #21	ATMIN (ENSSCAG00000006567) #22	ENSSCAG00000006569	PKD1L2 (ENSSCAG00000006577) #25	BCO1 (ENSSCAG00000006597) #27	GAN (ENSSCAG00000006604) #28	CMIP (ENSSCAG00000006615) #29	PLCG2 (ENSSCAG00000006629) #32	SDR42E1 (ENSSCAG00000006634) #33	HSD17B2 (ENSSCAG00000006639) #34	ENSSCAG00000006652	ENSSCAG00000006658	ENSSCAG00000006660	MPHOSPH6 (ENSSCAG00000006662) #35	CDH13 (ENSSCAG00000006672) #36	MLYCD (ENSSCAG00000006674)	HSBP1 (ENSSCAG00000006677) #37
Flycatcher	MODERN SPECIES	2	KIFC3 (ENSFALG00000006898)	CNGB1 (ENSFALG00000006885)	ZNF319 (ENSFALG00000014292)	USB1 (ENSFALG00000006876)	MMP15 (ENSFALG00000023117)	CFAP20 (ENSFALG00000024771)	CSNK2A2 (ENSFALG00000006864)	ENSFALG00000006902	GINS3 (ENSFALG00000029037)	NDRG4 (ENSFALG00000006850)	ENSFALG00000006846 #12	ENSFALG00000023580 #12	MAF (ENSFALG00000006844) #16	ENSFALG00000006840 #19	CMC2 (ENSFALG00000026435) #20	ATMIN (ENSFALG00000006834) #22	CENPN (ENSFALG00000006835) #21	ENSFALG00000006829	PKD1L2 (ENSFALG00000006826) #25	BCO1 (ENSFALG00000006810) #27	GAN (ENSFALG00000006805) #28	CMIP (ENSFALG00000006794) #29	PLCG2 (ENSFALG00000006754) #32	SDR42E1 (ENSFALG00000023083) #33	HSD17B2 (ENSFALG00000006730) #34	ENSFALG00000014290	ENSFALG00000014286	ENSFALG00000014283	MPHOSPH6 (ENSFALG00000028959) #35	ENSFALG00000025591	CDH13 (ENSFALG00000006727) #36
Great tit	MODERN SPECIES	2	CNGB1 (ENSPMJG00000014045)	ZNF319 (ENSPMJG00000014044)	USB1 (ENSPMJG00000014043)	MMP15 (ENSPMJG00000014042)	CFAP20 (ENSPMJG00000014041)	CSNK2A2 (ENSPMJG00000014040)	GINS3 (ENSPMJG00000014038)	NDRG4 (ENSPMJG00000014035)	WWOX (ENSPMJG00000014034) #12	ENSPMJG00000014027 #12	MAF (ENSPMJG00000014026) #16	ENSPMJG00000014018	CDYL2 (ENSPMJG00000014015) #19	CMC2 (ENSPMJG00000014012) #20	CENPN (ENSPMJG00000014005) #21	ATMIN (ENSPMJG00000014003) #22	PPP1R3E (ENSPMJG00000014002)	GCSH (ENSPMJG00000013998) #24	PKD1L2 (ENSPMJG00000013992) #25	BCO1 (ENSPMJG00000013991) #27	GAN (ENSPMJG00000013990) #28	CMIP (ENSPMJG00000013988) #29	PLCG2 (ENSPMJG00000013982) #32	SDR42E1 (ENSPMJG00000013981) #33	HSD17B2 (ENSPMJG00000013980) #34	ENSPMJG00000013978	ENSPMJG00000013977	ENSPMJG00000013976	MPHOSPH6 (ENSPMJG00000013975) #35	CDH13 (ENSPMJG00000013971) #36	MLYCD (ENSPMJG00000013963)
African ostrich	MODERN SPECIES	889												ENSSCUG00000012792	ENSSCUG00000012791	CDYL2 (ENSSCUG00000012787) #19	CENPN (ENSSCUG00000012783) #21	ATMIN (ENSSCUG00000012782) #22	ENSSCUG00000012781 #23	ENSSCUG00000012779	PKD1L2 (ENSSCUG00000012773) #25	BCO1 (ENSSCUG00000012767) #27	GAN (ENSSCUG00000012766) #28	CMIP (ENSSCUG00000012759) #29	PLCG2 (ENSSCUG00000012749) #32	SDR42E1 (ENSSCUG00000012746) #33	HSD17B2 (ENSSCUG00000012744) #34	ENSSCUG00000012742	ENSSCUG00000012740	ENSSCUG00000012738	MPHOSPH6 (ENSSCUG00000012736) #35	CDH13 (ENSSCUG00000012728) #36	MLYCD (ENSSCUG00000012723)
Australian saltwater crocodile	MODERN SPECIES	35	CDH5 (ENSCPRG00005005443)	CDH11 (ENSCPRG00005005508)	ENSCPRG00005005523	PPM1L (ENSCPRG00005005524)	CDH8 (ENSCPRG00005005540)	ADAMTS18 (ENSCPRG00005005562) #8	NUDT7 (ENSCPRG00005005600) #9	VAT1L (ENSCPRG00005005616) #10	CLEC3A (ENSCPRG00005005706) #11	WWOX (ENSCPRG00005005732) #12	ENSCPRG00005005777 #12	MAF (ENSCPRG00005005799) #16	DYNLRB2 (ENSCPRG00005005821) #18	CDYL2 (ENSCPRG00005005831) #19	CMC2 (ENSCPRG00005005851) #20	ATMIN (ENSCPRG00005005860) #22	ENSCPRG00005005888 #23	ENSCPRG00005005903	PKD1L2 (ENSCPRG00005005912) #25	BCO1 (ENSCPRG00005005937) #27	GAN (ENSCPRG00005005955) #28	CMIP (ENSCPRG00005005977) #29	PLCG2 (ENSCPRG00005006038) #32	SDR42E1 (ENSCPRG00005006053) #33	HSD17B2 (ENSCPRG00005006082) #34	ENSCPRG00005006255	ENSCPRG00005006261	ENSCPRG00005006265	MPHOSPH6 (ENSCPRG00005006275) #35	CDH13 (ENSCPRG00005006294) #36	MLYCD (ENSCPRG00005006313)
Cryptodira	ANCESTRAL SPECIES	14	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT01060000249485	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00940000159432.C	ENSGT00940000167286	ENSGT00940000154805.b.g	ENSGT00950000183008.a.a.b	ENSGT00940000154606	ENSGT00940000161906	ENSGT00950000182893.a.b	ENSGT00740000115581.e	ENSGT00940000158278	ENSGT00940000161681	ENSGT00390000007438	ENSGT00710000106790	ENSGT00940000159567	ENSGT00940000162200
Testudinoidea	ANCESTRAL SPECIES	13	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT01060000249485	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00940000167286	ENSGT00940000154805.b.g	ENSGT00950000183008.a.a.b	ENSGT00940000154606	ENSGT00940000161906	ENSGT00950000182893.a.b	ENSGT00740000115581.e	ENSGT00940000158278	ENSGT00940000161681	ENSGT00390000007438	ENSGT00710000106790.q	ENSGT00940000159567	ENSGT00940000162200	ENSGT00940000157841
Emydidae	ANCESTRAL SPECIES	47			ENSGT00940000153691.a.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT01060000249485	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00950000183008.a.a.b	ENSGT00940000154606	ENSGT00940000161906	ENSGT00950000182893.a.b	ENSGT00740000115581.e	ENSGT00940000158278	ENSGT00940000161681	ENSGT00390000007438	ENSGT00710000106790.q	ENSGT00940000159567	ENSGT00940000162200	ENSGT00940000157841	ENSGT00390000012708	ENSGT00390000014634
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	2267	ENSTMTG00000010395	ENSTMTG00000010448	ENSTMTG00000010694 #8	ENSTMTG00000010788 #9	ENSTMTG00000010804 #10	ENSTMTG00000010854 #11	ENSTMTG00000010880	ENSTMTG00000010888	ENSTMTG00000010903 #12	ENSTMTG00000010911 #12	ENSTMTG00000010922 #16	ENSTMTG00000010934 #18	ENSTMTG00000010946 #19	ENSTMTG00000010976 #20	ENSTMTG00000010997 #21	ENSTMTG00000011034 #22	ENSTMTG00000011045 #23	ENSTMTG00000011081	ENSTMTG00000011104	ENSTMTG00000011124 #27	ENSTMTG00000011150 #28	ENSTMTG00000011182 #29	ENSTMTG00000011289 #32	ENSTMTG00000012327 #33	ENSTMTG00000012335 #34	ENSTMTG00000012349	ENSTMTG00000012366	ENSTMTG00000012392 #35	ENSTMTG00000012415 #36	ENSTMTG00000012475	ENSTMTG00000012535 #37
Three-toed box turtle	MODERN SPECIES	2272				ENSTMTG00000012887	ENSTMTG00000012938	ENSTMTG00000013113 #8	ENSTMTG00000013209 #9	ENSTMTG00000013228 #10	ENSTMTG00000013265 #11	ENSTMTG00000013288 #12	ENSTMTG00000013305 #16	ENSTMTG00000013316 #18	ENSTMTG00000013328 #19	ENSTMTG00000013345 #20	ENSTMTG00000013358 #21	ENSTMTG00000013372 #22	ENSTMTG00000013394 #23	ENSTMTG00000013402	ENSTMTG00000013410	ENSTMTG00000013421 #25	ENSTMTG00000013433	ENSTMTG00000013451 #27	ENSTMTG00000013501 #28	ENSTMTG00000013515 #28	ENSTMTG00000013546 #29	ENSTMTG00000013651 #32	ENSTMTG00000014269 #33	ENSTMTG00000014279 #34	ENSTMTG00000014298	ENSTMTG00000014313	ENSTMTG00000014328 #35
painted turtle	MODERN SPECIES	708												DYNLRB2 (ENSCPBG00000000123) #18	CDYL2 (ENSCPBG00000024003) #19	CMC2 (ENSCPBG00000023998) #20	CENPN (ENSCPBG00000023991) #21	ATMIN (ENSCPBG00000023988) #22	ENSCPBG00000023985 #23	ENSCPBG00000023980	ENSCPBG00000023978	PKD1L2 (ENSCPBG00000023969) #25	BCO1 (ENSCPBG00000023964) #27	GAN (ENSCPBG00000023962) #28	CMIP (ENSCPBG00000023954) #29	PLCG2 (ENSCPBG00000023944) #32	SDR42E1 (ENSCPBG00000023938) #33	HSD17B2 (ENSCPBG00000023906) #34	ENSCPBG00000023901	ENSCPBG00000023899	MPHOSPH6 (ENSCPBG00000023898) #35	CDH13 (ENSCPBG00000023893) #36	MLYCD (ENSCPBG00000023890)
Testudinidae	ANCESTRAL SPECIES	17	ENSGT00530000063956.b.b	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT01100000266524	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00940000167286	ENSGT00940000154805.b.g	ENSGT00950000183008.a.a.b	ENSGT00940000154606	ENSGT00940000161906	ENSGT00950000182893.a.b	ENSGT00740000115581.e	ENSGT00940000158278	ENSGT00940000161681	ENSGT00710000106790.q	ENSGT00940000159567	ENSGT00940000157841	ENSGT00390000011666 #24	ENSGT00940000161577 #25
Abingdon island giant tortoise	MODERN SPECIES	2769												CDYL2 (ENSCABG00000021598) #19	ENSCABG00000021596	ENSCABG00000021594	CENPN (ENSCABG00000021591) #21	ATMIN (ENSCABG00000021588) #22	C16orf46 (ENSCABG00000021586) #23	ENSCABG00000021581	ENSCABG00000021578	PKD1L2 (ENSCABG00000021574) #25	BCO1 (ENSCABG00000021570) #27	GAN (ENSCABG00000021567) #28
Goode s thornscrub tortoise	MODERN SPECIES	3	ENSGEVG00005014732	CDH5 (ENSGEVG00005014779)	CDH11 (ENSGEVG00005015145)	CDH8 (ENSGEVG00005015245)	ADAMTS18 (ENSGEVG00005015477) #8	NUDT7 (ENSGEVG00005015659) #9	VAT1L (ENSGEVG00005015682) #10	CLEC3A (ENSGEVG00005015758) #11	WWOX (ENSGEVG00005015800) #12	ENSGEVG00005015858 #12	MAF (ENSGEVG00005015870) #16	DYNLRB2 (ENSGEVG00005015907) #18	CDYL2 (ENSGEVG00005015928) #19	ENSGEVG00005015990	CENPN (ENSGEVG00005016003) #21	ATMIN (ENSGEVG00005016050) #22	C16orf46 (ENSGEVG00005016069) #23	PPP1R3E (ENSGEVG00005016079)	GCSH (ENSGEVG00005016103) #24	PKD1L2 (ENSGEVG00005016151) #25	BCO1 (ENSGEVG00005016447) #27	GAN (ENSGEVG00005016541) #28	CMIP (ENSGEVG00005016563) #29	ENSGEVG00005016596	PLCG2 (ENSGEVG00005016632) #32	SDR42E1 (ENSGEVG00005016717) #33	HSD17B2 (ENSGEVG00005016732) #34	ENSGEVG00005016762	ENSGEVG00005016789	ENSGEVG00005016819	MPHOSPH6 (ENSGEVG00005016869) #35
Chinese turtle	MODERN SPECIES	1051											DYNLRB2 (ENSPSIG00000003887) #18	ENSPSIG00000003882 #19	ENSPSIG00000003880 #19	CMC2 (ENSPSIG00000003876) #20	CENPN (ENSPSIG00000003873) #21	ATMIN (ENSPSIG00000003868) #22	C16orf46 (ENSPSIG00000003864) #23	ENSPSIG00000003859	PKD1L2 (ENSPSIG00000003740) #25	BCO1 (ENSPSIG00000003698) #27	GAN (ENSPSIG00000003693) #28	CMIP (ENSPSIG00000003580) #29	PLCG2 (ENSPSIG00000003341) #32	SDR42E1 (ENSPSIG00000003337) #33	HSD17B2 (ENSPSIG00000003303) #34	ENSPSIG00000001107	ENSPSIG00000003301	ENSPSIG00000001091	MPHOSPH6 (ENSPSIG00000018195) #35	CDH13 (ENSPSIG00000018164) #36
Lepidosauria	ANCESTRAL SPECIES	29	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b.g	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00940000160959	ENSGT00940000154606	ENSGT00940000161906	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000158070 #33	ENSGT00940000160204 #34	ENSGT00390000012054.b.ab	ENSGT00390000012054.b.`b	ENSGT00390000009212 #35
Episquamata	ANCESTRAL SPECIES	11	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b.g	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00940000154606	ENSGT00940000161906	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000157672	ENSGT01030000235333	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019
Toxicofera	ANCESTRAL SPECIES	16	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b.g	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00940000154606	ENSGT00940000161906	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000157672	ENSGT01030000235333	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019
Elapidae	ANCESTRAL SPECIES	17	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b.g	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00940000154606	ENSGT00940000161906	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000157672	ENSGT01030000235333	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b
Elapidae_a	ANCESTRAL SPECIES	28	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b.g	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00940000161906	ENSGT00390000011666 #24	ENSGT00940000161577 #25
Acanthophiinae	ANCESTRAL SPECIES	26	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b.g	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000154593.b	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00940000161906	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000157672	ENSGT01030000235333	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B
Mainland tiger snake	MODERN SPECIES	41	ENSNSUG00000010288	CDH5 (ENSNSUG00000010302)	CDH11 (ENSNSUG00000010313)	CDH8 (ENSNSUG00000010380)	ADAMTS18 (ENSNSUG00000010393) #8	NUDT7 (ENSNSUG00000010397) #9	VAT1L (ENSNSUG00000010399) #10	CLEC3A (ENSNSUG00000010400) #11	ENSNSUG00000010402	WWOX (ENSNSUG00000010403) #12	MAF (ENSNSUG00000010404) #16	DYNLRB2 (ENSNSUG00000010408) #18	CDYL2 (ENSNSUG00000010409) #19	CMC2 (ENSNSUG00000010411) #20	CENPN (ENSNSUG00000010412) #21	ATMIN (ENSNSUG00000010415) #22	ENSNSUG00000010416	GCSH (ENSNSUG00000010417) #24	PKD1L2 (ENSNSUG00000010419) #25	GAN (ENSNSUG00000010426) #28	CMIP (ENSNSUG00000010432) #29	ENSNSUG00000010435	PLCG2 (ENSNSUG00000010437) #32	SLC12A4 (ENSNSUG00000010482)	ENSNSUG00000017961	ENSNSUG00000017962	DDX28 (ENSNSUG00000017963)	DUS2 (ENSNSUG00000017964)	NFATC3 (ENSNSUG00000017965)	ESRP2 (ENSNSUG00000017966)	ENSNSUG00000017970
Eastern brown snake	MODERN SPECIES	67	CDH5 (ENSPTXG00000006123)	CDH11 (ENSPTXG00000006121)	CDH8 (ENSPTXG00000006118)	ADAMTS18 (ENSPTXG00000006117) #8	NUDT7 (ENSPTXG00000006116) #9	VAT1L (ENSPTXG00000006115) #10	CLEC3A (ENSPTXG00000006113) #11	ENSPTXG00000006112	WWOX (ENSPTXG00000006111) #12	MAF (ENSPTXG00000006110) #16	DYNLRB2 (ENSPTXG00000006109) #18	CDYL2 (ENSPTXG00000006108) #19	CMC2 (ENSPTXG00000006106) #20	ENSPTXG00000006105	CENPN (ENSPTXG00000006104) #21	ATMIN (ENSPTXG00000006103) #22	ENSPTXG00000006102	GCSH (ENSPTXG00000006100) #24	PKD1L2 (ENSPTXG00000006096) #25	GAN (ENSPTXG00000006094) #28	CMIP (ENSPTXG00000006092) #29	PLCG2 (ENSPTXG00000006091) #32	SLC12A4 (ENSPTXG00000006090)	ENSPTXG00000006089	DPEP2 (ENSPTXG00000006087)	ENSPTXG00000006086	DDX28 (ENSPTXG00000006085)	DUS2 (ENSPTXG00000006052)	NFATC3 (ENSPTXG00000006051)	ESRP2 (ENSPTXG00000006050)	ENSPTXG00000006049
Blue-lipped sea krait	MODERN SPECIES	4731													CDYL2 (ENSLLTG00000018030) #19	CMC2 (ENSLLTG00000018029) #20	CENPN (ENSLLTG00000018027) #21	ATMIN (ENSLLTG00000018026) #22	ENSLLTG00000018025
Indian cobra	MODERN SPECIES	12	ENSNNAG00000012924	CDH5 (ENSNNAG00000012804)	CDH11 (ENSNNAG00000012759)	ENSNNAG00000012750	ENSNNAG00000012734	ADAMTS18 (ENSNNAG00000012235) #8	NUDT7 (ENSNNAG00000012179) #9	VAT1L (ENSNNAG00000012058) #10	CLEC3A (ENSNNAG00000012008) #11	WWOX (ENSNNAG00000011982) #12	MAF (ENSNNAG00000011944) #16	DYNLRB2 (ENSNNAG00000011901) #18	CDYL2 (ENSNNAG00000011876) #19	CMC2 (ENSNNAG00000011857) #20	CENPN (ENSNNAG00000011786) #21	ATMIN (ENSNNAG00000011761) #22	ENSNNAG00000011753 #23	ENSNNAG00000011737	ENSNNAG00000011724	PKD1L2 (ENSNNAG00000011501) #25	GAN (ENSNNAG00000011360) #28	CMIP (ENSNNAG00000011311) #29	PLCG2 (ENSNNAG00000011138) #32	SLC12A4 (ENSNNAG00000011059)	DPEP2 (ENSNNAG00000010899)	ENSNNAG00000010849	DDX28 (ENSNNAG00000010315)	DUS2 (ENSNNAG00000010247)	NFATC3 (ENSNNAG00000010199)	ESRP2 (ENSNNAG00000010114)	ENSNNAG00000011995
Lizard	MODERN SPECIES	803	ENSACAG00000013263	ENSACAG00000044584	SHCBP1 (ENSACAG00000013221)	ENSACAG00000040332	ENSACAG00000036107	ENSACAG00000037601	ENSACAG00000043785	ENSACAG00000022476 #16	ENSACAG00000044705	ENSACAG00000041576	ENSACAG00000038945	ENSACAG00000008780 #18	ENSACAG00000008783 #19	CMC2 (ENSACAG00000008855) #20	CENPN (ENSACAG00000008859) #21	ATMIN (ENSACAG00000008885) #22	ENSACAG00000042178 #23	ENSACAG00000043658	ENSACAG00000008905	PKD1L2 (ENSACAG00000008955) #25	BCO1 (ENSACAG00000009055) #27	GAN (ENSACAG00000009119) #28	CMIP (ENSACAG00000009149) #29	PLCG2 (ENSACAG00000009200) #32	SLC12A4 (ENSACAG00000009446)	ENSACAG00000009652	ENSACAG00000009728	DDX28 (ENSACAG00000009755)	DUS2 (ENSACAG00000009757)	NFATC3 (ENSACAG00000009839)	ESRP2 (ENSACAG00000009900)
Laterata	ANCESTRAL SPECIES	19	ENSGT00530000063956.b.b	ENSGT00940000165226	ENSGT00940000160587	ENSGT00940000153691.a.a.b	ENSGT00940000153691.a.b.g	ENSGT00940000157553 #8	ENSGT00940000159631 #9	ENSGT00940000159184 #10	ENSGT00950000183186.B.a #11	ENSGT00940000157389 #12	ENSGT00940000161531 #16	ENSGT00390000011067.B #18	ENSGT00940000159646 #19	ENSGT00390000016908 #20	ENSGT00390000004738 #21	ENSGT00390000013091 #22	ENSGT00390000017224 #23	ENSGT00390000011666 #24	ENSGT00940000161577 #25	ENSGT00950000182913.A.b.b #27	ENSGT00940000155273 #28	ENSGT00390000018220 #29	ENSGT00940000157517 #32	ENSGT00940000157672	ENSGT00940000160211.a	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B
Common wall lizard	MODERN SPECIES	16	ENSPMRG00000009600	ENSPMRG00000009595	ENSPMRG00000009586	ENSPMRG00000009583	ENSPMRG00000009580	ADAMTS18 (ENSPMRG00000009570) #8	NUDT7 (ENSPMRG00000009565) #9	VAT1L (ENSPMRG00000009558) #10	CLEC3A (ENSPMRG00000009550) #11	WWOX (ENSPMRG00000009541) #12	MAF (ENSPMRG00000009533) #16	ENSPMRG00000009527 #18	CDYL2 (ENSPMRG00000009518) #19	ENSPMRG00000009511	CENPN (ENSPMRG00000009503) #21	ATMIN (ENSPMRG00000009498) #22	ENSPMRG00000009494 #23	ENSPMRG00000009488	ENSPMRG00000009483	GCSH (ENSPMRG00000009476) #24	PKD1L2 (ENSPMRG00000009431) #25	BCO1 (ENSPMRG00000009422) #27	GAN (ENSPMRG00000009402) #28	CMIP (ENSPMRG00000009390) #29	PLCG2 (ENSPMRG00000009303) #32	ENSPMRG00000009228	ENSPMRG00000009204	ENSPMRG00000009157	ENSPMRG00000009133	DDX28 (ENSPMRG00000009125)	DUS2 (ENSPMRG00000009109)
Argentine black and white tegu	MODERN SPECIES	57	TK2 (ENSSMRG00000011139)	ENSSMRG00000011142	ENSSMRG00000011147	CDH5 (ENSSMRG00000011152)	CDH11 (ENSSMRG00000011205)	CDH8 (ENSSMRG00000011246)	ADAMTS18 (ENSSMRG00000011269) #8	VAT1L (ENSSMRG00000011492) #10	WWOX (ENSSMRG00000011502) #12	ENSSMRG00000011503	MAF (ENSSMRG00000011520) #16	DYNLRB2 (ENSSMRG00000011551) #18	CDYL2 (ENSSMRG00000011552) #19	CMC2 (ENSSMRG00000011555) #20	CENPN (ENSSMRG00000011557) #21	ATMIN (ENSSMRG00000011558) #22	ENSSMRG00000011559 #23	ENSSMRG00000011560	ENSSMRG00000011562	PKD1L2 (ENSSMRG00000011581) #25	BCO1 (ENSSMRG00000011589) #27	GAN (ENSSMRG00000011590) #28	CMIP (ENSSMRG00000011592) #29	PLCG2 (ENSSMRG00000011598) #32	SLC12A4 (ENSSMRG00000000008)	ENSSMRG00000000151	ENSSMRG00000000184	DDX28 (ENSSMRG00000000268)	DUS2 (ENSSMRG00000000287)	NFATC3 (ENSSMRG00000000337)	ESRP2 (ENSSMRG00000000355)