Chordata	ANCESTRAL SPECIES																	ENSGT00390000004385 #22
Vertebrata	ANCESTRAL SPECIES	290															ENSGT00390000017600 #21	ENSGT00390000004385 #22
Gnathostomata	ANCESTRAL SPECIES	332									ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25
Euteleostomi	ANCESTRAL SPECIES	149	ENSGT00390000012189	ENSGT00390000009802.b	ENSGT00390000009802.a	ENSGT00940000160025	ENSGT00390000018047	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a ##27	ENSGT00390000009842
Sarcopterygii	ANCESTRAL SPECIES	167	ENSGT00940000160025	ENSGT00390000018047	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25
Tetrapoda	ANCESTRAL SPECIES	1	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520 #34	ENSGT00940000161205	ENSGT00940000154835.C	ENSGT00940000154573	ENSGT00390000008538	ENSGT00940000156211.b
Amniota	ANCESTRAL SPECIES	3	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000154835.C	ENSGT00940000154573	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00390000008538	ENSGT00940000156211.b
Mammalia	ANCESTRAL SPECIES	65	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36
Theria	ANCESTRAL SPECIES	11	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Eutheria	ANCESTRAL SPECIES	20	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT01040000240632	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Boreoeutheria	ANCESTRAL SPECIES	22	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Euarchontoglires	ANCESTRAL SPECIES	22	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154519.g.a
Primates	ANCESTRAL SPECIES	24	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154519.g.a
Haplorrhini	ANCESTRAL SPECIES	25	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154519.g.a
Simiiformes	ANCESTRAL SPECIES	24	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00390000004950.k.a	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00910000147007	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205
Catarrhini	ANCESTRAL SPECIES	23	ENSGT00940000154437.mc.b	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00390000004950.k.a	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317.c #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00910000146931	ENSGT00910000147007	ENSGT00940000158137.c.a #25	ENSGT00520000059830 #26	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000159720.w.b #31	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35
Hominoidea	ANCESTRAL SPECIES	24	ENSGT00390000018044.b.a	ENSGT00940000154437.mc.b	ENSGT00390000015600.c.b	ENSGT00390000004950.k.a	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317.c #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00910000146931	ENSGT00910000147007	ENSGT00940000158137.c.a #25	ENSGT00520000059830 #26	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000159720.w.b #31	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.p #34	ENSGT00940000161560 #35
Hominidae	ANCESTRAL SPECIES	24	ENSGT00390000018044.b.a	ENSGT00940000154437.mc.b	ENSGT00390000015600.c.b	ENSGT00390000004950.k.a	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317.c #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00520000059830 #26	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000159720.w.b #31	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.p #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	26	ENSGT00390000018044.b.a	ENSGT00940000154437.mc.b	ENSGT00390000015600.c.b	ENSGT00940000164261.a	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317.c #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00520000059830 #26	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000159720.w.b #31	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.o ##34	ENSGT00940000154520.p #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36
Homo/Pan group	ANCESTRAL SPECIES	25	ENSGT00390000018044.b.a	ENSGT00940000154437.mc.b	ENSGT00390000015600.c.b	ENSGT00940000164261.a	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317.c #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00520000059830 #26	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000159720.w.b #31	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.o ##34	ENSGT00940000154520.p #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36
Pan	ANCESTRAL SPECIES	24	ENSGT00940000164261.a	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00400000022679 #12	ENSGT00950000182892.a.b.b.d #13	ENSGT00390000000560.s.d	ENSGT00390000015066.d #15	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317.c #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00520000059830 #26	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000159720.w.b #31	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.o ##34	ENSGT00940000154520.p #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36
Bonobo	MODERN SPECIES	9	GRP (ENSPPAG00000043111) #7	RAX (ENSPPAG00000035734) #8	CPLX4 (ENSPPAG00000029872) #9	LMAN1 (ENSPPAG00000027366) #10	CCBE1 (ENSPPAG00000031234) #11	ENSPPAG00000031874 #12	ENSPPAG00000031967 #13	ENSPPAG00000032356 #14	ENSPPAG00000032548 #15	MC4R (ENSPPAG00000032218) #16	CDH20 (ENSPPAG00000033146) #17	ENSPPAG00000034157 #18	ENSPPAG00000032446 #19	RNF152 (ENSPPAG00000032380) #20	PIGN (ENSPPAG00000039389) #21	RELCH (ENSPPAG00000015474) #22	TNFRSF11A (ENSPPAG00000022623) #23	ZCCHC2 (ENSPPAG00000029037) #24	ENSPPAG00000030188 #25	ENSPPAG00000032208 #26	BCL2 (ENSPPAG00000032001) #27	KDSR (ENSPPAG00000032046) #28	VPS4B (ENSPPAG00000033680) #29	SERPINB5 (ENSPPAG00000020982) #30	ENSPPAG00000021994 #31	SERPINB12 (ENSPPAG00000027253) #32	SERPINB13 (ENSPPAG00000042830) #33	ENSPPAG00000035011 #34	SERPINB11 (ENSPPAG00000027276) #35	SERPINB7 (ENSPPAG00000028168) #36	SERPINB2 (ENSPPAG00000039479) #37
Chimpanzee	MODERN SPECIES	9	RAX (ENSPTRG00000010058) #8	CPLX4 (ENSPTRG00000010059) #9	LMAN1 (ENSPTRG00000010060) #10	CCBE1 (ENSPTRG00000010062) #11	ENSPTRG00000010064 #12	ENSPTRG00000044644 #13	ENSPTRG00000049722	ENSPTRG00000043997	ENSPTRG00000048934 #15	MC4R (ENSPTRG00000010067) #16	ENSPTRG00000044311 #18	CDH20 (ENSPTRG00000010069) #17	ENSPTRG00000044860 #19	RNF152 (ENSPTRG00000047926) #20	PIGN (ENSPTRG00000010072) #21	RELCH (ENSPTRG00000010074) #22	TNFRSF11A (ENSPTRG00000010075) #23	ZCCHC2 (ENSPTRG00000010076) #24	PHLPP1 (ENSPTRG00000010077) #25	ENSPTRG00000043714 #26	BCL2 (ENSPTRG00000042753) #27	KDSR (ENSPTRG00000010080) #28	VPS4B (ENSPTRG00000010083) #29	SERPINB5 (ENSPTRG00000029287) #30	ENSPTRG00000052006 #31	ENSPTRG00000045159 #32	SERPINB13 (ENSPTRG00000024181) #33	SERPINB4 (ENSPTRG00000041544) ##34	ENSPTRG00000051194 #34	ENSPTRG00000051042 #35	SERPINB7 (ENSPTRG00000010090) #36
Human	MODERN SPECIES	9	NEDD4L (ENSG00000049759)	ALPK2 (ENSG00000198796)	MALT1 (ENSG00000172175)	ZNF532 (ENSG00000074657)	SEC11C (ENSG00000166562)	GRP (ENSG00000134443) #7	RAX (ENSG00000134438) #8	CPLX4 (ENSG00000166569) #9	LMAN1 (ENSG00000074695) #10	CCBE1 (ENSG00000183287) #11	PMAIP1 (ENSG00000141682)	MC4R (ENSG00000166603) #16	CDH20 (ENSG00000101542) #17	RNF152 (ENSG00000176641) #20	PIGN (ENSG00000197563) #21	RELCH (ENSG00000134444) #22	TNFRSF11A (ENSG00000141655) #23	ZCCHC2 (ENSG00000141664) #24	PHLPP1 (ENSG00000081913) #25	BCL2 (ENSG00000171791) #27	KDSR (ENSG00000119537) #28	VPS4B (ENSG00000119541) #29	SERPINB5 (ENSG00000206075) #30	SERPINB12 (ENSG00000166634) #32	SERPINB13 (ENSG00000197641) #33	SERPINB4 (ENSG00000206073) ##34	SERPINB11 (ENSG00000206072) #35	SERPINB3 (ENSG00000057149) #34	SERPINB7 (ENSG00000166396) #36	SERPINB2 (ENSG00000197632) #37	ENSG00000289724
Gorilla	MODERN SPECIES	9	GRP (ENSGGOG00000002670) #7	RAX (ENSGGOG00000006747) #8	CPLX4 (ENSGGOG00000006750) #9	LMAN1 (ENSGGOG00000006753) #10	CCBE1 (ENSGGOG00000016394) #11	ENSGGOG00000005394 #12	ENSGGOG00000007170 #13	ENSGGOG00000023935	ENSGGOG00000040955	RPS3A (ENSGGOG00000027455) ##14	MC4R (ENSGGOG00000015011) #16	CDH20 (ENSGGOG00000006915) #17	ENSGGOG00000041434 #19	ENSGGOG00000026693	PIGN (ENSGGOG00000005051) #21	RELCH (ENSGGOG00000015020) #22	TNFRSF11A (ENSGGOG00000004309) #23	ZCCHC2 (ENSGGOG00000002966) #24	PHLPP1 (ENSGGOG00000005176) #25	ENSGGOG00000024193 #26	BCL2 (ENSGGOG00000037403) #27	KDSR (ENSGGOG00000013317) #28	VPS4B (ENSGGOG00000006727) #29	SERPINB5 (ENSGGOG00000025505) #30	ENSGGOG00000041777 #31	SERPINB12 (ENSGGOG00000013680) #32	ENSGGOG00000015299 #33	ENSGGOG00000039204 #33	SERPINB4 (ENSGGOG00000027895) ##34	SERPINB11 (ENSGGOG00000037436) #35	SERPINB7 (ENSGGOG00000010523) #36
Orangutan	MODERN SPECIES	9	SEC11C (ENSPPYG00000009189)	ENSPPYG00000009190	ENSPPYG00000009191 #7	RAX (ENSPPYG00000009192) #8	CPLX4 (ENSPPYG00000009193) #9	LMAN1 (ENSPPYG00000033447) #10	CCBE1 (ENSPPYG00000009194) #11	ENSPPYG00000033726	ENSPPYG00000009196 #12	ENSPPYG00000034802	MC4R (ENSPPYG00000009198) #16	CDH20 (ENSPPYG00000009201) #17	ENSPPYG00000034773	RNF152 (ENSPPYG00000009202) #20	PIGN (ENSPPYG00000009203) #21	RELCH (ENSPPYG00000009204) #22	TNFRSF11A (ENSPPYG00000009205) #23	ZCCHC2 (ENSPPYG00000009208) #24	PHLPP1 (ENSPPYG00000009209) #25	BCL2 (ENSPPYG00000037186) #27	KDSR (ENSPPYG00000032354) #28	VPS4B (ENSPPYG00000009214) #29	SERPINB5 (ENSPPYG00000009215) #30	SERPINB12 (ENSPPYG00000009216) #32	SERPINB13 (ENSPPYG00000009217) #33	ENSPPYG00000009219 #34	ENSPPYG00000009218 #34	SERPINB11 (ENSPPYG00000009220) #35	SERPINB7 (ENSPPYG00000009221) #36	SERPINB2 (ENSPPYG00000009222) #37	SERPINB10 (ENSPPYG00000009223)
Gibbon	MODERN SPECIES	19	GRP (ENSNLEG00000008356) #7	ENSNLEG00000028740	CPLX4 (ENSNLEG00000008370) #9	LMAN1 (ENSNLEG00000008377) #10	CCBE1 (ENSNLEG00000008450) #11	ENSNLEG00000031514 #12	ENSNLEG00000033152 #13	ENSNLEG00000035401	ENSNLEG00000034761 #14	ENSNLEG00000029313 #15	MC4R (ENSNLEG00000018455) #16	CDH20 (ENSNLEG00000008475) #17	ENSNLEG00000027988 #19	RNF152 (ENSNLEG00000029429) #20	PIGN (ENSNLEG00000008507) #21	RELCH (ENSNLEG00000008586) #22	TNFRSF11A (ENSNLEG00000008614) #23	ENSNLEG00000008618 #24	ENSNLEG00000032069	ENSNLEG00000033457	ENSNLEG00000008641 #25	BCL2 (ENSNLEG00000035984) #27	KDSR (ENSNLEG00000008689) #28	VPS4B (ENSNLEG00000008719) #29	ENSNLEG00000027724 #31	SERPINB5 (ENSNLEG00000036047) #30	SERPINB12 (ENSNLEG00000008767) #32	SERPINB13 (ENSNLEG00000008779) #33	SERPINB3 (ENSNLEG00000008799) #34	ENSNLEG00000008863 ##34	SERPINB11 (ENSNLEG00000008871) #35
Cercopithecidae	ANCESTRAL SPECIES	25	ENSGT00390000015600.c.b	ENSGT00390000004950.k.a	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT00400000022679 #12	ENSGT00390000015066.d #15	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317.c #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00910000146931	ENSGT00910000147007	ENSGT00940000158137.c.a #25	ENSGT00520000059830 #26	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000159720.w.b #31	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35
Cercopithecinae	ANCESTRAL SPECIES	22	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00390000004950.k.a	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00390000012138.a.a.j.b ##18	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317.c #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00910000144211.n.b	ENSGT00520000055637.A.a #24	ENSGT00910000146931	ENSGT00910000147007	ENSGT00940000158137.c.a #25	ENSGT00520000059830 #26	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000159720.w.b #31	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34
Cercopithecinae_a	ANCESTRAL SPECIES	21	ENSGT00390000004950.k.a	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00390000009405.b.c.a.a.d.a.a.a.b	ENSGT00400000022679 #12	ENSGT00390000015066.d #15	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00390000012138.a.a.j.b ##18	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317.c #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00910000144211.n.b	ENSGT00520000055637.A.a #24	ENSGT00910000146931	ENSGT00910000147007	ENSGT00940000158137.c.a #25	ENSGT00520000059830 #26	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000159720.w.b #31	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.q.b #34
Macaca	ANCESTRAL SPECIES	22	ENSGT00390000015600.c.b	ENSGT00390000004950.k.a	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00390000009405.b.c.a.a.d.a.a.a.b	ENSGT00400000022679 #12	ENSGT00390000015066.d #15	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317.c #20	ENSGT00390000017600 #21	ENSGT00530000063301.a.b.ab	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00910000144211.n.b	ENSGT00520000055637.A.a #24	ENSGT00910000146931	ENSGT00910000147007	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000159720.w.b #31	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.q.b #34	ENSGT00940000154520.q.a #34
Pig-tailed macaque	MODERN SPECIES	542	ENSMNEG00000040117	GRP (ENSMNEG00000033375) #7	RAX (ENSMNEG00000041287) #8	CPLX4 (ENSMNEG00000030063) #9	LMAN1 (ENSMNEG00000031265) #10	ENSMNEG00000032188	CCBE1 (ENSMNEG00000042288) #11	ENSMNEG00000018890	ENSMNEG00000031762 #12	ENSMNEG00000042417 #15	MC4R (ENSMNEG00000023251) #16	CDH20 (ENSMNEG00000008504) #17	RNF152 (ENSMNEG00000000755) #20	ENSMNEG00000028004	PIGN (ENSMNEG00000034630) #21	RELCH (ENSMNEG00000042183) #22	TNFRSF11A (ENSMNEG00000023058) #23	ENSMNEG00000005892	ZCCHC2 (ENSMNEG00000033594) #24	ENSMNEG00000005045	ENSMNEG00000025053	ENSMNEG00000045516 #26	PHLPP1 (ENSMNEG00000036950) #25	BCL2 (ENSMNEG00000035403) #27	KDSR (ENSMNEG00000044691) #28	VPS4B (ENSMNEG00000034541) #29	ENSMNEG00000041767 #31	SERPINB5 (ENSMNEG00000043388) #30	SERPINB12 (ENSMNEG00000043742) #32	SERPINB13 (ENSMNEG00000039304) #33	ENSMNEG00000032395 #34
Macaca_a	ANCESTRAL SPECIES	21	ENSGT00940000154437.mc.b	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT01040000244781	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317.c #20	ENSGT01010000223043.I	ENSGT00390000017600 #21	ENSGT00530000063301.a.b.ab	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00910000146931	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.q.b #34	ENSGT00940000154520.q.a #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37
Rhesus	MODERN SPECIES	9	SEC11C (ENSMMUG00000004408)	GRP (ENSMMUG00000007584) #7	RAX (ENSMMUG00000007583) #8	CPLX4 (ENSMMUG00000041950) #9	LMAN1 (ENSMMUG00000007580) #10	ENSMMUG00000051244	CCBE1 (ENSMMUG00000010402) #11	PMAIP1 (ENSMMUG00000064421)	ENSMMUG00000051384	MC4R (ENSMMUG00000017258) #16	CDH20 (ENSMMUG00000001713) #17	RNF152 (ENSMMUG00000041998) #20	ENSMMUG00000057285	ENSMMUG00000042620	PIGN (ENSMMUG00000002204) #21	RELCH (ENSMMUG00000002209) #22	TNFRSF11A (ENSMMUG00000002210) #23	ENSMMUG00000061630	ZCCHC2 (ENSMMUG00000004434) #24	PHLPP1 (ENSMMUG00000005145) #25	ENSMMUG00000053421	BCL2 (ENSMMUG00000059194) #27	KDSR (ENSMMUG00000006578) #28	VPS4B (ENSMMUG00000021184) #29	SERPINB5 (ENSMMUG00000014182) #30	SERPINB12 (ENSMMUG00000007171) #32	SERPINB13 (ENSMMUG00000047095) #33	ENSMMUG00000042415 #34	ENSMMUG00000058384 #34	SERPINB11 (ENSMMUG00000008737) #35	SERPINB7 (ENSMMUG00000016615) #36
Crab-eating macaque	MODERN SPECIES	9	LMAN1 (ENSMFAG00000044600) #10	ENSMFAG00000042520	CCBE1 (ENSMFAG00000045721) #11	ENSMFAG00000026282	ENSMFAG00000056615 #12	ENSMFAG00000044835	ENSMFAG00000051880	ENSMFAG00000063056	MC4R (ENSMFAG00000023876) #16	ENSMFAG00000061236	CDH20 (ENSMFAG00000034335) #17	RNF152 (ENSMFAG00000033578) #20	ENSMFAG00000054958	ENSMFAG00000003660	PIGN (ENSMFAG00000043496) #21	RELCH (ENSMFAG00000044668) #22	TNFRSF11A (ENSMFAG00000035682) #23	ZCCHC2 (ENSMFAG00000033238) #24	ENSMFAG00000058799	PHLPP1 (ENSMFAG00000010807) #25	BCL2 (ENSMFAG00000056444) #27	KDSR (ENSMFAG00000042704) #28	VPS4B (ENSMFAG00000042282) #29	SERPINB5 (ENSMFAG00000045261) #30	SERPINB12 (ENSMFAG00000045116) #32	SERPINB13 (ENSMFAG00000049388) #33	ENSMFAG00000044526 #34	ENSMFAG00000043466 #34	SERPINB11 (ENSMFAG00000043383) #35	SERPINB7 (ENSMFAG00000035961) #36	SERPINB2 (ENSMFAG00000035794) #37
Cercopithecinae_b	ANCESTRAL SPECIES	25	ENSGT00390000004950.k.a	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00390000009405.b.c.a.a.d.a.a.a.b	ENSGT00400000022679 #12	ENSGT00390000015066.d #15	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00390000012138.a.a.j.b ##18	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317.c #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00910000144211.n.b	ENSGT00520000055637.A.a #24	ENSGT00910000146931	ENSGT00910000147007	ENSGT00940000158137.c.a #25	ENSGT00520000059830 #26	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000159720.w.b #31	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.q.b #34
Olive baboon	MODERN SPECIES	10	ENSPANG00000037675	ZNF532 (ENSPANG00000013155)	ENSPANG00000017577	SEC11C (ENSPANG00000009639)	GRP (ENSPANG00000049361) #7	RAX (ENSPANG00000025282) #8	CPLX4 (ENSPANG00000002795) #9	LMAN1 (ENSPANG00000015052) #10	CCBE1 (ENSPANG00000006223) #11	ENSPANG00000044019	ENSPANG00000006445 #12	MC4R (ENSPANG00000004549) #16	CDH20 (ENSPANG00000003495) #17	RNF152 (ENSPANG00000018854) #20	PIGN (ENSPANG00000012687) #21	RELCH (ENSPANG00000006661) #22	TNFRSF11A (ENSPANG00000007128) #23	ENSPANG00000049776	ZCCHC2 (ENSPANG00000013121) #24	ENSPANG00000040574	PHLPP1 (ENSPANG00000017084) #25	BCL2 (ENSPANG00000009477) #27	KDSR (ENSPANG00000013366) #28	VPS4B (ENSPANG00000014087) #29	SERPINB5 (ENSPANG00000000094) #30	ENSPANG00000043024	SERPINB12 (ENSPANG00000041894) #32	SERPINB13 (ENSPANG00000017624) #33	SERPINB4 (ENSPANG00000002793) #34	SERPINB11 (ENSPANG00000010233) #35	SERPINB7 (ENSPANG00000039908) #36
Cercopithecinae_d	ANCESTRAL SPECIES	97	ENSGT00390000004950.k.a	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00390000009405.b.c.a.a.d.a.a.a.b	ENSGT00400000022679 #12	ENSGT00390000015066.d #15	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00390000012138.a.a.j.b ##18	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317.c #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00910000144211.n.b	ENSGT00520000055637.A.a #24	ENSGT00910000146931	ENSGT00910000147007	ENSGT00940000158137.c.a #25	ENSGT00520000059830 #26	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000159720.w.b #31	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.q.b #34
Sooty mangabey	MODERN SPECIES	151	SEC11C (ENSCATG00000038817)	ENSCATG00000040513	GRP (ENSCATG00000032906) #7	RAX (ENSCATG00000040796) #8	CPLX4 (ENSCATG00000043681) #9	LMAN1 (ENSCATG00000006847) #10	CCBE1 (ENSCATG00000030453) #11	ENSCATG00000021379	ENSCATG00000041633 #12	ENSCATG00000033427 #15	MC4R (ENSCATG00000022584) #16	CDH20 (ENSCATG00000027205) #17	ENSCATG00000032607 ##18	RNF152 (ENSCATG00000008717) #20	PIGN (ENSCATG00000043851) #21	RELCH (ENSCATG00000035794) #22	TNFRSF11A (ENSCATG00000033230) #23	ENSCATG00000038834	ZCCHC2 (ENSCATG00000038478) #24	ENSCATG00000038102	ENSCATG00000038171	PHLPP1 (ENSCATG00000031354) #25	ENSCATG00000044013 #26	BCL2 (ENSCATG00000044077) #27	KDSR (ENSCATG00000018172) #28	VPS4B (ENSCATG00000037092) #29	SERPINB5 (ENSCATG00000044074) #30	ENSCATG00000026398 #31	SERPINB12 (ENSCATG00000039614) #32	SERPINB13 (ENSCATG00000040933) #33	ENSCATG00000022759 #34
Drill	MODERN SPECIES	1429												CDH20 (ENSMLEG00000009478) #17	ENSMLEG00000012844 #19	RNF152 (ENSMLEG00000003858) #20	PIGN (ENSMLEG00000032873) #21	RELCH (ENSMLEG00000035494) #22	TNFRSF11A (ENSMLEG00000036292) #23	ENSMLEG00000038432	ZCCHC2 (ENSMLEG00000031802) #24	ENSMLEG00000027594	ENSMLEG00000000842
Vervet Monkey	MODERN SPECIES	9	ALPK2 (ENSCSAG00000018160)	MALT1 (ENSCSAG00000018162)	ZNF532 (ENSCSAG00000018163)	ENSCSAG00000018165	SEC11C (ENSCSAG00000018166)	GRP (ENSCSAG00000018167) #7	RAX (ENSCSAG00000018169) #8	CPLX4 (ENSCSAG00000018170) #9	LMAN1 (ENSCSAG00000018172) #10	CCBE1 (ENSCSAG00000018174) #11	PMAIP1 (ENSCSAG00000018175)	MC4R (ENSCSAG00000018565) #16	CDH20 (ENSCSAG00000018177) #17	RNF152 (ENSCSAG00000019509) #20	PIGN (ENSCSAG00000018179) #21	RELCH (ENSCSAG00000018184) #22	TNFRSF11A (ENSCSAG00000018186) #23	ENSCSAG00000019508	ZCCHC2 (ENSCSAG00000018187) #24	PHLPP1 (ENSCSAG00000018190) #25	BCL2 (ENSCSAG00000018191) #27	KDSR (ENSCSAG00000018193) #28	VPS4B (ENSCSAG00000018195) #29	SERPINB5 (ENSCSAG00000018197) #30	SERPINB12 (ENSCSAG00000018198) #32	SERPINB13 (ENSCSAG00000018200) #33	ENSCSAG00000018203 #34	SERPINB11 (ENSCSAG00000018204) #35	SERPINB7 (ENSCSAG00000018205) #36	SERPINB2 (ENSCSAG00000018206) #37	ENSCSAG00000019507
Rhinopithecus	ANCESTRAL SPECIES	86	ENSGT00390000018044.b.a	ENSGT00940000154437.mc.b	ENSGT00390000015600.c.b	ENSGT00390000004950.k.a	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00400000022679 #12	ENSGT00390000015066.d #15	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317.c #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00910000144211.n.a	ENSGT00940000159860	ENSGT01050000244824.B	ENSGT00940000157863.h	ENSGT00940000156618	ENSGT00910000147062	ENSGT00940000161882	ENSGT00940000160697	ENSGT00950000182848.c.b.b.b	ENSGT00900000143764	ENSGT00950000182848.d	ENSGT00910000147043	ENSGT00410000029004	ENSGT00390000006761
Golden snub-nosed monkey	MODERN SPECIES	2704														RNF152 (ENSRROG00000013967) #20	PIGN (ENSRROG00000023479) #21	RELCH (ENSRROG00000029118) #22	TNFRSF11A (ENSRROG00000033381) #23	ENSRROG00000021726	ZCCHC2 (ENSRROG00000034247) #24	ENSRROG00000045212	ENSRROG00000038725	PHLPP1 (ENSRROG00000001874) #25	BCL2 (ENSRROG00000041139) #27	KDSR (ENSRROG00000045372) #28	VPS4B (ENSRROG00000040329) #29	SERPINB5 (ENSRROG00000044903) #30	SERPINB12 (ENSRROG00000035046) #32	SERPINB13 (ENSRROG00000001115) #33	ENSRROG00000045797 #34	SERPINB11 (ENSRROG00000007361) #35	SERPINB7 (ENSRROG00000028650) #36
Black snub-nosed monkey	MODERN SPECIES	203									ENSRBIG00000029578 #12	ENSRBIG00000040793 #15	MC4R (ENSRBIG00000030799) #16	ENSRBIG00000033254 ##18	CDH20 (ENSRBIG00000008811) #17	RNF152 (ENSRBIG00000030184) #20	PIGN (ENSRBIG00000040970) #21	RELCH (ENSRBIG00000034611) #22	TNFRSF11A (ENSRBIG00000028258) #23	ENSRBIG00000001691	ZCCHC2 (ENSRBIG00000035806) #24	ENSRBIG00000042862	PHLPP1 (ENSRBIG00000043821) #25	ENSRBIG00000035016	BCL2 (ENSRBIG00000029201) #27	KDSR (ENSRBIG00000014872) #28
Platyrrhini	ANCESTRAL SPECIES	26	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00390000010355.q.b	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00910000146866.b	ENSGT00390000012818.o.a.b	ENSGT00530000065105	ENSGT00940000154891.g.a.a	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00910000147007	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205
Cebidae	ANCESTRAL SPECIES	28	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00390000010355.q.b	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00910000146866.b	ENSGT00390000012818.o.a.b	ENSGT00530000065105	ENSGT00940000154891.g.a.a.q	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00910000147007	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205
Cebidae_a	ANCESTRAL SPECIES	23	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00390000010355.q.b	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00910000146866.b	ENSGT00390000012818.o.a.b	ENSGT00530000065105	ENSGT00940000154891.g.a.a.q	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00910000147007	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205
Bolivian squirrel monkey	MODERN SPECIES	58	CPLX4 (ENSSBOG00000006854) #9	LMAN1 (ENSSBOG00000032551) #10	ENSSBOG00000034853	CCBE1 (ENSSBOG00000022868) #11	ENSSBOG00000021383	ENSSBOG00000031779	PMAIP1 (ENSSBOG00000014865)	ENSSBOG00000028439	MC4R (ENSSBOG00000020175) #16	ENSSBOG00000028653	ENSSBOG00000016040	CDH20 (ENSSBOG00000000800) #17	ENSSBOG00000019237 #19	RNF152 (ENSSBOG00000019756) #20	PIGN (ENSSBOG00000023440) #21	RELCH (ENSSBOG00000021059) #22	TNFRSF11A (ENSSBOG00000031898) #23	ZCCHC2 (ENSSBOG00000022911) #24	PHLPP1 (ENSSBOG00000035408) #25	BCL2 (ENSSBOG00000031435) #27	KDSR (ENSSBOG00000022404) #28	VPS4B (ENSSBOG00000029236) #29	SERPINB5 (ENSSBOG00000021946) #30	SERPINB12 (ENSSBOG00000023505) #32	SERPINB13 (ENSSBOG00000032850) #33	ENSSBOG00000035703 #34	SERPINB11 (ENSSBOG00000029576) #35	SERPINB7 (ENSSBOG00000022610) #36	SERPINB2 (ENSSBOG00000028920) #37	SERPINB10 (ENSSBOG00000026076)	HMSD (ENSSBOG00000022952)
Capuchin	MODERN SPECIES	55	GRP (ENSCCAG00000037333) #7	RAX (ENSCCAG00000026966) #8	CPLX4 (ENSCCAG00000036168) #9	ENSCCAG00000020582	LMAN1 (ENSCCAG00000022128) #10	CCBE1 (ENSCCAG00000028326) #11	ENSCCAG00000026400	ENSCCAG00000023744	PMAIP1 (ENSCCAG00000026882)	ENSCCAG00000035349	MC4R (ENSCCAG00000010738) #16	CDH20 (ENSCCAG00000024476) #17	ENSCCAG00000019220 #19	RNF152 (ENSCCAG00000017842) #20	PIGN (ENSCCAG00000029900) #21	RELCH (ENSCCAG00000001680) #22	TNFRSF11A (ENSCCAG00000028118) #23	ZCCHC2 (ENSCCAG00000021979) #24	ENSCCAG00000033207	PHLPP1 (ENSCCAG00000029981) #25	BCL2 (ENSCCAG00000020452) #27	KDSR (ENSCCAG00000023953) #28	VPS4B (ENSCCAG00000023255) #29	SERPINB5 (ENSCCAG00000030099) #30	SERPINB12 (ENSCCAG00000006824) #32	SERPINB13 (ENSCCAG00000029974) #33	ENSCCAG00000033004 #34	SERPINB11 (ENSCCAG00000037581) #35	SERPINB7 (ENSCCAG00000034316) #36	SERPINB2 (ENSCCAG00000031695) #37	SERPINB10 (ENSCCAG00000021308)
Marmoset	MODERN SPECIES	4	RAX (ENSCJAG00000003509) #8	CPLX4 (ENSCJAG00000038431) #9	LMAN1 (ENSCJAG00000038558) #10	CCBE1 (ENSCJAG00000003456) #11	ENSCJAG00000081139	PMAIP1 (ENSCJAG00000077617)	ENSCJAG00000078094	ENSCJAG00000074677	MC4R (ENSCJAG00000022877) #16	ENSCJAG00000085951	ENSCJAG00000087077	CDH20 (ENSCJAG00000003409) #17	RNF152 (ENSCJAG00000040526) #20	ENSCJAG00000077061	PIGN (ENSCJAG00000003367) #21	RELCH (ENSCJAG00000003333) #22	TNFRSF11A (ENSCJAG00000003331) #23	ENSCJAG00000070461	ZCCHC2 (ENSCJAG00000003312) #24	PHLPP1 (ENSCJAG00000003250) #25	BCL2 (ENSCJAG00000042791) #27	KDSR (ENSCJAG00000006662) #28	VPS4B (ENSCJAG00000006696) #29	SERPINB5 (ENSCJAG00000037297) #30	SERPINB12 (ENSCJAG00000035996) #32	SERPINB13 (ENSCJAG00000006802) #33	ENSCJAG00000006825 #34	SERPINB11 (ENSCJAG00000006731) #35	SERPINB7 (ENSCJAG00000033719) #36	SERPINB2 (ENSCJAG00000006860) #37	SERPINB10 (ENSCJAG00000042748)
Mas night monkey	MODERN SPECIES	597	RAX (ENSANAG00000022377) #8	ENSANAG00000019675	CPLX4 (ENSANAG00000028631) #9	LMAN1 (ENSANAG00000035855) #10	ENSANAG00000031789	CCBE1 (ENSANAG00000003325) #11	ENSANAG00000001571	ENSANAG00000023411	PMAIP1 (ENSANAG00000021785)	ENSANAG00000026293	MC4R (ENSANAG00000020256) #16	CDH20 (ENSANAG00000037402) #17	ENSANAG00000019533 #19	RNF152 (ENSANAG00000009411) #20	PIGN (ENSANAG00000035765) #21	RELCH (ENSANAG00000001851) #22	TNFRSF11A (ENSANAG00000033804) #23	ZCCHC2 (ENSANAG00000035764) #24	ENSANAG00000034643	ENSANAG00000031780	PHLPP1 (ENSANAG00000034305) #25	BCL2 (ENSANAG00000032927) #27	KDSR (ENSANAG00000037737) #28	VPS4B (ENSANAG00000023558) #29	SERPINB5 (ENSANAG00000020730) #30	SERPINB12 (ENSANAG00000036987) #32
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	7164																ENSTSYG00000006455 #22	ENSTSYG00000012770 #23
Tarsier	MODERN SPECIES	3008															PIGN (ENSTSYG00000003063) #21	ENSTSYG00000025875 #22
Strepsirrhini	ANCESTRAL SPECIES	22	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Lemuriformes	ANCESTRAL SPECIES	25	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Lemuriformes_a	ANCESTRAL SPECIES	62	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Coquerels sifaka	MODERN SPECIES	330															ENSPCOG00000003542 #21	RELCH (ENSPCOG00000016198) #22	TNFRSF11A (ENSPCOG00000015571) #23	ZCCHC2 (ENSPCOG00000022710) #24	PHLPP1 (ENSPCOG00000025545) #25	BCL2 (ENSPCOG00000022386) #27	KDSR (ENSPCOG00000021469) #28	ENSPCOG00000019065 #29	SERPINB5 (ENSPCOG00000014389) #30	SERPINB12 (ENSPCOG00000006428) #32	SERPINB11 (ENSPCOG00000000062) #35	SERPINB7 (ENSPCOG00000014367) #36	SERPINB2 (ENSPCOG00000020009) #37	SERPINB10 (ENSPCOG00000016424)	SERPINB8 (ENSPCOG00000020587)
Greater bamboo lemur	MODERN SPECIES	565	ALPK2 (ENSPSMG00000023693)	MALT1 (ENSPSMG00000023678)	ZNF532 (ENSPSMG00000023642)	ENSPSMG00000023628	SEC11C (ENSPSMG00000023622)	GRP (ENSPSMG00000023605) #7	RAX (ENSPSMG00000023601) #8	CPLX4 (ENSPSMG00000023600) #9	LMAN1 (ENSPSMG00000023594) #10	CCBE1 (ENSPSMG00000023579) #11	MC4R (ENSPSMG00000023557) #16	ENSPSMG00000023548	CDH20 (ENSPSMG00000023522) #17	RNF152 (ENSPSMG00000023505) #20	PIGN (ENSPSMG00000023136) #21	RELCH (ENSPSMG00000022255) #22	TNFRSF11A (ENSPSMG00000022012) #23	ZCCHC2 (ENSPSMG00000021943) #24	PHLPP1 (ENSPSMG00000021934) #25	ENSPSMG00000021910	BCL2 (ENSPSMG00000021907) #27	KDSR (ENSPSMG00000021858) #28	VPS4B (ENSPSMG00000021794) #29	SERPINB5 (ENSPSMG00000021765) #30	SERPINB12 (ENSPSMG00000021758) #32	SERPINB13 (ENSPSMG00000021747) #33	ENSPSMG00000021650 #34	SERPINB11 (ENSPSMG00000021484) #35	ENSPSMG00000021454 #36	ENSPSMG00000021448 #37	SERPINB10 (ENSPSMG00000021438)
Mouse lemur	MODERN SPECIES	10	MEIKIN (ENSMICG00000034049)	FNIP1 (ENSMICG00000032728)	RAPGEF6 (ENSMICG00000011120)	CDC42SE2 (ENSMICG00000029677)	LYRM7 (ENSMICG00000042590)	HINT1 (ENSMICG00000035584)	ENSMICG00000044795	ENSMICG00000043881 #12	ENSMICG00000000239	ENSMICG00000028871	MC4R (ENSMICG00000038383) #16	ENSMICG00000001779	CDH20 (ENSMICG00000032447) #17	ENSMICG00000033522 #19	PIGN (ENSMICG00000002034) #21	RELCH (ENSMICG00000010954) #22	TNFRSF11A (ENSMICG00000010979) #23	ZCCHC2 (ENSMICG00000001550) #24	PHLPP1 (ENSMICG00000001559) #25	BCL2 (ENSMICG00000036161) #27	KDSR (ENSMICG00000001582) #28	VPS4B (ENSMICG00000001589) #29	SERPINB5 (ENSMICG00000001596) #30	SERPINB12 (ENSMICG00000001604) #32	SERPINB13 (ENSMICG00000001607) #33	SERPINB11 (ENSMICG00000029493) #35	SERPINB7 (ENSMICG00000031364) #36	SERPINB2 (ENSMICG00000016506) #37	SERPINB10 (ENSMICG00000016513)	SERPINB8 (ENSMICG00000016522)	CCBE1 (ENSMICG00000036056) #11
Bushbaby	MODERN SPECIES	142	ALPK2 (ENSOGAG00000015625)	MALT1 (ENSOGAG00000015629)	ZNF532 (ENSOGAG00000016596)	ENSOGAG00000030701	SEC11C (ENSOGAG00000002570)	GRP (ENSOGAG00000006747) #7	RAX (ENSOGAG00000002572) #8	CPLX4 (ENSOGAG00000002575) #9	LMAN1 (ENSOGAG00000002577) #10	CCBE1 (ENSOGAG00000012264) #11	ENSOGAG00000032581	MC4R (ENSOGAG00000011176) #16	CDH20 (ENSOGAG00000014077) #17	RNF152 (ENSOGAG00000005860) #20	PIGN (ENSOGAG00000005862) #21	RELCH (ENSOGAG00000027738) #22	TNFRSF11A (ENSOGAG00000033600) #23	ZCCHC2 (ENSOGAG00000024641) #24	PHLPP1 (ENSOGAG00000002330) #25	BCL2 (ENSOGAG00000002333) #27	KDSR (ENSOGAG00000002334) #28	VPS4B (ENSOGAG00000002337) #29	SERPINB5 (ENSOGAG00000013550) #30	SERPINB12 (ENSOGAG00000013556) #32	SERPINB13 (ENSOGAG00000013561) #33	ENSOGAG00000013564 #34	SERPINB11 (ENSOGAG00000004354) #35	SERPINB7 (ENSOGAG00000016648) #36	SERPINB2 (ENSOGAG00000016653) #37	SERPINB10 (ENSOGAG00000016658)	SERPINB8 (ENSOGAG00000016664)
Euarchontoglires_A	ANCESTRAL SPECIES	22	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Tree shrew	MODERN SPECIES	4976															PIGN (ENSTBEG00000006666) #21	RELCH (ENSTBEG00000007667) #22	TNFRSF11A (ENSTBEG00000008044) #23
Glires	ANCESTRAL SPECIES	23	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Rodentia	ANCESTRAL SPECIES	23	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Rodentia_B	ANCESTRAL SPECIES	27	ENSGT00940000160524	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Myomorpha	ANCESTRAL SPECIES	35	ENSGT00940000160524	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Muroidea	ANCESTRAL SPECIES	81													ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Muroidea_A	ANCESTRAL SPECIES	12	ENSGT00390000010354	ENSGT00940000157211	ENSGT00940000156332	ENSGT00940000163000	ENSGT00940000155984	ENSGT00940000159862	ENSGT00940000159213	ENSGT00940000159158	ENSGT00940000154817.b.b.b	ENSGT00390000011515	ENSGT00940000153568.B	ENSGT00940000164023	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Cricetidae	ANCESTRAL SPECIES	13	ENSGT00390000010354	ENSGT00940000157211	ENSGT00940000156332	ENSGT00940000163000	ENSGT00940000155984	ENSGT00940000159862	ENSGT00940000159213	ENSGT00940000159158	ENSGT00940000154817.b.b.b	ENSGT00390000011515	ENSGT00940000153568.B	ENSGT00940000164023	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00390000006925	ENSGT00390000010354	ENSGT00940000157211	ENSGT00940000156332	ENSGT00940000163000	ENSGT00940000155984	ENSGT00940000159862	ENSGT00940000159213	ENSGT00940000159158	ENSGT00940000154817.b.b.b	ENSGT00390000011515	ENSGT00940000153568.B	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Chinese hamster chok1gshd	MODERN SPECIES	2	Ralb (ENSCGRG00001018860)	Inhbb (ENSCGRG00001021419)	Gli2 (ENSCGRG00001023112)	ENSCGRG00001003252	Tfcp2l1 (ENSCGRG00001009789)	Clasp1 (ENSCGRG00001010650)	Nifk (ENSCGRG00001016466)	TSN (ENSCGRG00001018233)	ENSCGRG00001007738	ENSCGRG00001022226	ENSCGRG00001007230	ENSCGRG00001021112	Cdh20 (ENSCGRG00001022413) #17	Rnf152 (ENSCGRG00001008692) #20	Pign (ENSCGRG00001013700) #21	Relch (ENSCGRG00001016605) #22	Tnfrsf11a (ENSCGRG00001018680) #23	Zcchc2 (ENSCGRG00001022059) #24	Phlpp1 (ENSCGRG00001019420) #25	BCL2 (ENSCGRG00001024362) #27	Kdsr (ENSCGRG00001003536) #28	ENSCGRG00001017700 #29	Serpinb5 (ENSCGRG00001022199) #30	Serpinb12 (ENSCGRG00001024353) #32	Serpinb13 (ENSCGRG00001006266) #33	ENSCGRG00001009018 #34	Serpinb11 (ENSCGRG00001013872) #35	ENSCGRG00001016113 #36	ENSCGRG00001013756 #36	Serpinb2 (ENSCGRG00001014826) #37	Serpinb10 (ENSCGRG00001018662)
Golden Hamster	MODERN SPECIES	731												ENSMAUG00000000250	Cdh20 (ENSMAUG00000016994) #17	Rnf152 (ENSMAUG00000017238) #20	ENSMAUG00000015736 #21	Relch (ENSMAUG00000015534) #22	Tnfrsf11a (ENSMAUG00000014227) #23	Zcchc2 (ENSMAUG00000016369) #24	Phlpp1 (ENSMAUG00000008246) #25	Bcl2 (ENSMAUG00000010979) #27	Kdsr (ENSMAUG00000010483) #28	Serpinb5 (ENSMAUG00000004274) #30	Serpinb12 (ENSMAUG00000000971) #32	Serpinb13 (ENSMAUG00000014096) #33	ENSMAUG00000009311 #34	Serpinb11 (ENSMAUG00000011507) #35	Serpinb7 (ENSMAUG00000010461) #36	Serpinb2 (ENSMAUG00000000062) #37	Serpinb10 (ENSMAUG00000005165)	Serpinb8 (ENSMAUG00000000719)	ENSMAUG00000001271
Cricetidae_B	ANCESTRAL SPECIES	8	ENSGT00390000010354	ENSGT00940000157211	ENSGT00940000156332	ENSGT00940000163000	ENSGT00940000155984	ENSGT00940000159862	ENSGT00940000159213	ENSGT00940000159158	ENSGT00940000154817.b.b.b	ENSGT00390000011515	ENSGT00940000153568.B	ENSGT00940000164023	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Northern American deer mouse	MODERN SPECIES	2													Cdh20 (ENSPEMG00000011379) #17	Rnf152 (ENSPEMG00000026843) #20	Pign (ENSPEMG00000011385) #21	Relch (ENSPEMG00000007491) #22	Tnfrsf11a (ENSPEMG00000018169) #23	ENSPEMG00000024769	Zcchc2 (ENSPEMG00000015159) #24	ENSPEMG00000008892	Phlpp1 (ENSPEMG00000017197) #25	Bcl2 (ENSPEMG00000023121) #27	Kdsr (ENSPEMG00000031226) #28	Vps4b (ENSPEMG00000021703) #29	Serpinb5 (ENSPEMG00000017189) #30	Serpinb12 (ENSPEMG00000008298) #32	Serpinb13 (ENSPEMG00000023235) #33	ENSPEMG00000023589 #34	Serpinb11 (ENSPEMG00000010881) #35	Serpinb7 (ENSPEMG00000023263) #36	Serpinb2 (ENSPEMG00000021421) #37
Prairie vole	MODERN SPECIES	14	Inhbb (ENSMOCG00000023014)	Gli2 (ENSMOCG00000015946)	Tfcp2l1 (ENSMOCG00000016470)	Clasp1 (ENSMOCG00000004583)	Nifk (ENSMOCG00000001962)	Tsn (ENSMOCG00000013248)	ENSMOCG00000018277	ENSMOCG00000010878	ENSMOCG00000019760	ENSMOCG00000000633	ENSMOCG00000010740	ENSMOCG00000001250	Cdh20 (ENSMOCG00000014345) #17	Rnf152 (ENSMOCG00000020478) #20	Pign (ENSMOCG00000011826) #21	Relch (ENSMOCG00000015326) #22	Tnfrsf11a (ENSMOCG00000001050) #23	Zcchc2 (ENSMOCG00000021627) #24	Phlpp1 (ENSMOCG00000011825) #25	Bcl2 (ENSMOCG00000015172) #27	Kdsr (ENSMOCG00000007564) #28	Vps4b (ENSMOCG00000001006) #29	Taf1a (ENSMOCG00000017898)	Zp3r (ENSMOCG00000013017)	C4bp (ENSMOCG00000002177)	Pfkfb2 (ENSMOCG00000020141)	Yod1 (ENSMOCG00000015805)	AA986860 (ENSMOCG00000014371)	Fcamr (ENSMOCG00000017825)	Pigr (ENSMOCG00000016988)	Fcmr (ENSMOCG00000000852)
Murinae	ANCESTRAL SPECIES	11												ENSGT00940000164023.c.a	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Mus	ANCESTRAL SPECIES	5	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT00390000013662	ENSGT00730000111385	ENSGT01030000234535.F.b	ENSGT01080000257410.D.c	ENSGT01080000257410.D.d.b.b	ENSGT00390000005782	ENSGT00390000009048.a.b	ENSGT00940000160670	ENSGT00940000156369	ENSGT01080000257410.D.d.b.a	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.db.a #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Mus_A	ANCESTRAL SPECIES	5	ENSGT00950000182944.B.a	ENSGT00390000013662	ENSGT00730000111385	ENSGT01030000234535.F.b	ENSGT01080000257410.D.c	ENSGT01080000257410.D.d.b.b	ENSGT00390000005782	ENSGT00390000009048.a.b	ENSGT00940000160670	ENSGT00940000156369	ENSGT01080000257410.D.d.b.a	ENSGT00940000164023.c.b	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.db.a.a.a #34	ENSGT00940000154520.db.a.a.b.a.a #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205
Ryukyu mouse	MODERN SPECIES		Neu4 (MGP_CAROLIEiJ_G0014469)	Pdcd1 (MGP_CAROLIEiJ_G0014470)	Fam174a (MGP_CAROLIEiJ_G0014471)	St8sia4 (MGP_CAROLIEiJ_G0014472)	Slco4c1 (MGP_CAROLIEiJ_G0014473)	Slco6c1 (MGP_CAROLIEiJ_G0014474)	Macir (MGP_CAROLIEiJ_G0014475)	Ppip5k2 (MGP_CAROLIEiJ_G0014476)	Gin1 (MGP_CAROLIEiJ_G0014477)	Pam (MGP_CAROLIEiJ_G0014478)	MGP_CAROLIEiJ_G0014479	Cntnap5b (MGP_CAROLIEiJ_G0014480)	Cdh20 (MGP_CAROLIEiJ_G0014481) #17	Rnf152 (MGP_CAROLIEiJ_G0014482) #20	Pign (MGP_CAROLIEiJ_G0014483) #21	Relch (MGP_CAROLIEiJ_G0014484) #22	Tnfrsf11a (MGP_CAROLIEiJ_G0014485) #23	Zcchc2 (MGP_CAROLIEiJ_G0014486) #24	Phlpp1 (MGP_CAROLIEiJ_G0014487) #25	Bcl2 (MGP_CAROLIEiJ_G0014488) #27	Kdsr (MGP_CAROLIEiJ_G0014489) #28	Vps4b (MGP_CAROLIEiJ_G0014490) #29	Serpinb5 (MGP_CAROLIEiJ_G0014491) #30	Serpinb12 (MGP_CAROLIEiJ_G0014492) #32	Serpinb13 (MGP_CAROLIEiJ_G0014493) #33	MGP_CAROLIEiJ_G0014494 #34	MGP_CAROLIEiJ_G0014495 #34	MGP_CAROLIEiJ_G0014496 #34	Serpinb11 (MGP_CAROLIEiJ_G0014497) #35	Serpinb7 (MGP_CAROLIEiJ_G0014498) #36	Serpinb2 (MGP_CAROLIEiJ_G0014499) #37
Mus_B	ANCESTRAL SPECIES	7	ENSGT00950000182944.B.a	ENSGT00390000013662	ENSGT00730000111385	ENSGT01030000234535.F.b	ENSGT01080000257410.D.c	ENSGT01080000257410.D.d.b.b	ENSGT00390000005782	ENSGT00390000009048.a.b	ENSGT00940000160670	ENSGT00940000156369	ENSGT01080000257410.D.d.b.a	ENSGT00940000164023.c.b	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.db.a.b #34	ENSGT00940000154520.db.a.a.b.b #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205
Mouse	MODERN SPECIES		Neu4 (ENSMUSG00000034000)	Pdcd1 (ENSMUSG00000026285)	Fam174a (ENSMUSG00000051185)	St8sia4 (ENSMUSG00000040710)	Slco4c1 (ENSMUSG00000040693)	Slco6c1 (ENSMUSG00000026331)	Macir (ENSMUSG00000044768)	Ppip5k2 (ENSMUSG00000040648)	Gin1 (ENSMUSG00000026333)	Pam (ENSMUSG00000026335)	Slco6d1 (ENSMUSG00000026336)	Cntnap5b (ENSMUSG00000067028)	Cdh20 (ENSMUSG00000050840) #17	Rnf152 (ENSMUSG00000047496) #20	Pign (ENSMUSG00000056536) #21	Relch (ENSMUSG00000026319) #22	Tnfrsf11a (ENSMUSG00000026321) #23	Zcchc2 (ENSMUSG00000038866) #24	Phlpp1 (ENSMUSG00000044340) #25	Bcl2 (ENSMUSG00000057329) #27	Kdsr (ENSMUSG00000009905) #28	Vps4b (ENSMUSG00000009907) #29	Serpinb5 (ENSMUSG00000067006) #30	Serpinb12 (ENSMUSG00000059956) #32	Serpinb13 (ENSMUSG00000048775) #33	Serpinb3a (ENSMUSG00000044594) #34	Serpinb3d (ENSMUSG00000058017) #34	Serpinb3b (ENSMUSG00000073602) #34	Serpinb3c (ENSMUSG00000073601) #34	Serpinb11 (ENSMUSG00000026327) #35	Serpinb7 (ENSMUSG00000067001) #36
Mus_C	ANCESTRAL SPECIES	1	ENSGT00950000182944.B.a	ENSGT00390000013662	ENSGT00730000111385	ENSGT01030000234535.F.b	ENSGT01080000257410.D.c	ENSGT01080000257410.D.d.b.b	ENSGT00390000005782	ENSGT00390000009048.a.b	ENSGT00940000160670	ENSGT00940000156369	ENSGT01080000257410.D.d.b.a	ENSGT00940000164023.c.b	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.db.a.b #34	ENSGT00940000154520.db.a.a.b.b #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205
spretus	MODERN SPECIES		Neu4 (MGP_SPRETEiJ_G0015273)	Pdcd1 (MGP_SPRETEiJ_G0015274)	Fam174a (MGP_SPRETEiJ_G0015275)	St8sia4 (MGP_SPRETEiJ_G0015276)	Slco4c1 (MGP_SPRETEiJ_G0015277)	MGP_SPRETEiJ_G0015278	Macir (MGP_SPRETEiJ_G0015279)	Ppip5k2 (MGP_SPRETEiJ_G0015280)	Gin1 (MGP_SPRETEiJ_G0015281)	Pam (MGP_SPRETEiJ_G0015282)	MGP_SPRETEiJ_G0015283	Cntnap5b (MGP_SPRETEiJ_G0015284)	Cdh20 (MGP_SPRETEiJ_G0015285) #17	Rnf152 (MGP_SPRETEiJ_G0015286) #20	Pign (MGP_SPRETEiJ_G0015287) #21	Relch (MGP_SPRETEiJ_G0015288) #22	Tnfrsf11a (MGP_SPRETEiJ_G0015289) #23	Zcchc2 (MGP_SPRETEiJ_G0015290) #24	Phlpp1 (MGP_SPRETEiJ_G0015291) #25	MGP_SPRETEiJ_G0015292	Bcl2 (MGP_SPRETEiJ_G0015293) #27	Kdsr (MGP_SPRETEiJ_G0015294) #28	Vps4b (MGP_SPRETEiJ_G0015295) #29	Serpinb5 (MGP_SPRETEiJ_G0015296) #30	Serpinb12 (MGP_SPRETEiJ_G0015297) #32	Serpinb13 (MGP_SPRETEiJ_G0015298) #33	MGP_SPRETEiJ_G0015299 #34	MGP_SPRETEiJ_G0015300 #34	MGP_SPRETEiJ_G0015301 #34	MGP_SPRETEiJ_G0015302 #34	Serpinb11 (MGP_SPRETEiJ_G0015303) #35
Steppe mouse	MODERN SPECIES	3127													ENSMSIG00000013807	Cdh20 (ENSMSIG00000013842) #17	Pign (ENSMSIG00000013888) #21	Relch (ENSMSIG00000014000) #22	ENSMSIG00000014329	Tnfrsf11a (ENSMSIG00000014343) #23	Zcchc2 (ENSMSIG00000014375) #24	ENSMSIG00000014446 #25	Bcl2 (ENSMSIG00000014587) #27	Kdsr (ENSMSIG00000014598) #28	Vps4b (ENSMSIG00000014637) #29
Shrew mouse	MODERN SPECIES	18	MGP_PahariEiJ_G0027703	MGP_PahariEiJ_G0027704	Neu4 (MGP_PahariEiJ_G0027705)	Pdcd1 (MGP_PahariEiJ_G0027706)	Fam174a (MGP_PahariEiJ_G0027707)	St8sia4 (MGP_PahariEiJ_G0027708)	Slco4c1 (MGP_PahariEiJ_G0027709)	MGP_PahariEiJ_G0027710	Macir (MGP_PahariEiJ_G0027711)	Ppip5k2 (MGP_PahariEiJ_G0027712)	Gin1 (MGP_PahariEiJ_G0027713)	Pam (MGP_PahariEiJ_G0027714)	Cdh20 (MGP_PahariEiJ_G0027715) #17	Rnf152 (MGP_PahariEiJ_G0027716) #20	Pign (MGP_PahariEiJ_G0027717) #21	Relch (MGP_PahariEiJ_G0027718) #22	Tnfrsf11a (MGP_PahariEiJ_G0027719) #23	Zcchc2 (MGP_PahariEiJ_G0027720) #24	Phlpp1 (MGP_PahariEiJ_G0027721) #25	Bcl2 (MGP_PahariEiJ_G0027722) #27	Kdsr (MGP_PahariEiJ_G0027723) #28	Vps4b (MGP_PahariEiJ_G0027724) #29	Serpinb5 (MGP_PahariEiJ_G0027725) #30	Serpinb12 (MGP_PahariEiJ_G0027726) #32	Serpinb13 (MGP_PahariEiJ_G0027727) #33	MGP_PahariEiJ_G0027728 #34	MGP_PahariEiJ_G0027729 #34	MGP_PahariEiJ_G0027730 #34	MGP_PahariEiJ_G0027731 #34	Serpinb11 (MGP_PahariEiJ_G0027732) #35	Serpinb7 (MGP_PahariEiJ_G0027733) #36
Rat	MODERN SPECIES	4	ENSRNOG00000066965	Cntnap5a (ENSRNOG00000070614)	ENSRNOG00000064103	AABR07020651.1 (ENSRNOG00000053423)	ENSRNOG00000064688	LOC679594 (ENSRNOG00000069659)	LOC304725 (ENSRNOG00000066325)	ENSRNOG00000064561	RGD1561440 (ENSRNOG00000066175)	Cntnap5b (ENSRNOG00000064462)	ENSRNOG00000069305	ENSRNOG00000062937	Cdh20 (ENSRNOG00000014556) #17	Rnf152 (ENSRNOG00000014859) #20	Pign (ENSRNOG00000014866) #21	Relch (ENSRNOG00000015508) #22	Tnfrsf11a (ENSRNOG00000015615) #23	Zcchc2 (ENSRNOG00000002882) #24	Phlpp1 (ENSRNOG00000002821) #25	Bcl2 (ENSRNOG00000067693) #27	Kdsr (ENSRNOG00000002781) #28	Vps4b (ENSRNOG00000002705) #29	Serpinb5 (ENSRNOG00000002640) #30	Serpinb12 (ENSRNOG00000002602) #32	Serpinb13 (ENSRNOG00000028194) #33	Serpinb3a (ENSRNOG00000066913) #34	Serpinb3 (ENSRNOG00000070387) #34	Serpinb11 (ENSRNOG00000002583) #35	Serpinb7 (ENSRNOG00000002555) #36	Serpinb2 (ENSRNOG00000002460) #37	Serpinb10 (ENSRNOG00000002417)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1113													Cdh20 (ENSNGAG00000016548) #17	Rnf152 (ENSNGAG00000017085) #20	Pign (ENSNGAG00000002622) #21	Relch (ENSNGAG00000021763) #22	Tnfrsf11a (ENSNGAG00000005944) #23	Zcchc2 (ENSNGAG00000022381) #24	Phlpp1 (ENSNGAG00000010418) #25	Bcl2 (ENSNGAG00000018658) #27	Kdsr (ENSNGAG00000011869) #28	Vps4b (ENSNGAG00000008872) #29	ENSNGAG00000012613 #30	Serpinb12 (ENSNGAG00000014696) #32	Serpinb13 (ENSNGAG00000011347) #33	ENSNGAG00000022108 #34	Serpinb11 (ENSNGAG00000000935) #35	Serpinb7 (ENSNGAG00000019555) #36	Serpinb2 (ENSNGAG00000023970) #37	Serpinb10 (ENSNGAG00000008537)	Serpinb8 (ENSNGAG00000011535)
Lesser Egyptian jerboa	MODERN SPECIES	55	Nedd4l (ENSJJAG00000020973)	Alpk2 (ENSJJAG00000013993)	Malt1 (ENSJJAG00000016390)	Zfp532 (ENSJJAG00000009613)	Oacyl (ENSJJAG00000016319)	Sec11c (ENSJJAG00000019294)	Grp (ENSJJAG00000022135) #7	Rax (ENSJJAG00000022840) #8	Cplx4 (ENSJJAG00000015877) #9	Lman1 (ENSJJAG00000017636) #10	Ccbe1 (ENSJJAG00000009754) #11	Mc4r (ENSJJAG00000006252) #16	Cdh20 (ENSJJAG00000019980) #17	Rnf152 (ENSJJAG00000005839) #20	Pign (ENSJJAG00000010519) #21	Relch (ENSJJAG00000001421) #22	ENSJJAG00000017098	Tnfrsf11a (ENSJJAG00000019894) #23	Zcchc2 (ENSJJAG00000014570) #24	Phlpp1 (ENSJJAG00000013408) #25	Bcl2 (ENSJJAG00000003950) #27	Kdsr (ENSJJAG00000021281) #28	Vps4b (ENSJJAG00000017232) #29	ENSJJAG00000007330	Serpinb5 (ENSJJAG00000014688) #30	ENSJJAG00000007840	Serpinb12 (ENSJJAG00000000456) #32	Serpinb13 (ENSJJAG00000021980) #33	ENSJJAG00000013143 #34	Serpinb11 (ENSJJAG00000000317) #35	Serpinb7 (ENSJJAG00000019416) #36
Kangaroo rat	MODERN SPECIES	362	Atp8b1 (ENSDORG00000011543)	Nedd4l (ENSDORG00000016653)	Alpk2 (ENSDORG00000023625)	Malt1 (ENSDORG00000016659)	ENSDORG00000004740	ENSDORG00000025013	Sec11c (ENSDORG00000005523)	Rax (ENSDORG00000011950) #8	Cplx4 (ENSDORG00000011953) #9	Lman1 (ENSDORG00000011955) #10	Ccbe1 (ENSDORG00000011957) #11	Mc4r (ENSDORG00000029473) #16	Cdh20 (ENSDORG00000012629) #17	Rnf152 (ENSDORG00000030100) #20	Pign (ENSDORG00000014874) #21	Relch (ENSDORG00000014880) #22	Tnfrsf11a (ENSDORG00000012538) #23	Zcchc2 (ENSDORG00000010199) #24	Phlpp1 (ENSDORG00000014723) #25	Bcl2 (ENSDORG00000002041) #27	Kdsr (ENSDORG00000002042) #28	Vps4b (ENSDORG00000008318) #29	Serpinb5 (ENSDORG00000008321) #30	Serpinb12 (ENSDORG00000024498) #32	Serpinb13 (ENSDORG00000012814) #33	ENSDORG00000013344 #34	ENSDORG00000013346 #34	Serpinb11 (ENSDORG00000025663) #35	Serpinb7 (ENSDORG00000006583) #36	Serpinb2 (ENSDORG00000006585) #37	Serpinb10 (ENSDORG00000006586)
Rodentia_A	ANCESTRAL SPECIES	23	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Sciuridae	ANCESTRAL SPECIES	31	ENSGT00940000160524	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Marmotini	ANCESTRAL SPECIES	31	ENSGT00940000156873	ENSGT00940000160524	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Marmotini_b	ANCESTRAL SPECIES	80	ENSGT00940000156873	ENSGT00940000160524	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Arctic ground squirrel	MODERN SPECIES	305														CDH20 (ENSUPAG00010023870) #17	PIGN (ENSUPAG00010023871) #21	RELCH (ENSUPAG00010023872) #22	TNFRSF11A (ENSUPAG00010023873) #23	ZCCHC2 (ENSUPAG00010023875) #24	PHLPP1 (ENSUPAG00010023877) #25	BCL2 (ENSUPAG00010023878) #27	KDSR (ENSUPAG00010023879) #28	VPS4B (ENSUPAG00010023880) #29	SERPINB5 (ENSUPAG00010023881) #30	SERPINB12 (ENSUPAG00010023882) #32	ENSUPAG00010023883 #33
Squirrel	MODERN SPECIES	97	NEDD4L (ENSSTOG00000012833)	ALPK2 (ENSSTOG00000025921)	MALT1 (ENSSTOG00000022780)	ZNF532 (ENSSTOG00000023882)	ENSSTOG00000024496	SEC11C (ENSSTOG00000030761)	GRP (ENSSTOG00000013119) #7	RAX (ENSSTOG00000013122) #8	CPLX4 (ENSSTOG00000026773) #9	LMAN1 (ENSSTOG00000013136) #10	CCBE1 (ENSSTOG00000031042) #11	MC4R (ENSSTOG00000026368) #16	CDH20 (ENSSTOG00000024289) #17	RNF152 (ENSSTOG00000005738) #20	PIGN (ENSSTOG00000009250) #21	RELCH (ENSSTOG00000009279) #22	TNFRSF11A (ENSSTOG00000028465) #23	ZCCHC2 (ENSSTOG00000015357) #24	PHLPP1 (ENSSTOG00000022642) #25	BCL2 (ENSSTOG00000021845) #27	KDSR (ENSSTOG00000007407) #28	VPS4B (ENSSTOG00000022926) #29	SERPINB5 (ENSSTOG00000007438) #30	ENSSTOG00000007447 #32	ENSSTOG00000032639 #33	ENSSTOG00000016358 #34	SERPINB11 (ENSSTOG00000007486) #35	SERPINB7 (ENSSTOG00000007491) #36	SERPINB2 (ENSSTOG00000007501) #37	SERPINB10 (ENSSTOG00000021393)	SERPINB8 (ENSSTOG00000020053)
Alpin marmot	MODERN SPECIES	10	ZNF532 (ENSMMMG00000003901)	ENSMMMG00000003885	SEC11C (ENSMMMG00000003846)	GRP (ENSMMMG00000003828) #7	ENSMMMG00000003814 #8	CPLX4 (ENSMMMG00000003808) #9	LMAN1 (ENSMMMG00000003785) #10	ENSMMMG00000003767	ENSMMMG00000003756	MC4R (ENSMMMG00000003752) #16	ENSMMMG00000003748	CDH20 (ENSMMMG00000003730) #17	ENSMMMG00000003725	RNF152 (ENSMMMG00000003718) #20	PIGN (ENSMMMG00000003607) #21	RELCH (ENSMMMG00000003264) #22	TNFRSF11A (ENSMMMG00000003183) #23	ZCCHC2 (ENSMMMG00000003092) #24	PHLPP1 (ENSMMMG00000002855) #25	BCL2 (ENSMMMG00000002828) #27	KDSR (ENSMMMG00000002692) #28	VPS4B (ENSMMMG00000002671) #29	SERPINB5 (ENSMMMG00000002637) #30	SERPINB12 (ENSMMMG00000002596) #32	SERPINB13 (ENSMMMG00000002577) #33	ENSMMMG00000002538 #34	SERPINB11 (ENSMMMG00000002520) #35	SERPINB7 (ENSMMMG00000002501) #36	SERPINB2 (ENSMMMG00000002481) #37	SERPINB10 (ENSMMMG00000002470)	SERPINB8 (ENSMMMG00000002464)
Eurasian red squirrel	MODERN SPECIES	4	ZNF532 (ENSSVLG00005025563)	ENSSVLG00005025583	SEC11C (ENSSVLG00005025599)	GRP (ENSSVLG00005025618) #7	RAX (ENSSVLG00005025628) #8	CPLX4 (ENSSVLG00005025636) #9	LMAN1 (ENSSVLG00005025647) #10	CCBE1 (ENSSVLG00005025669) #11	PMAIP1 (ENSSVLG00005025676)	ENSSVLG00005025678	MC4R (ENSSVLG00005025684) #16	ENSSVLG00005025688	CDH20 (ENSSVLG00005025693) #17	ENSSVLG00005025701 #20	ENSSVLG00005025713 #21	RELCH (ENSSVLG00005025750) #22	TNFRSF11A (ENSSVLG00005025785) #23	ENSSVLG00005025794	ZCCHC2 (ENSSVLG00005005356) #24	ENSSVLG00005005447	PHLPP1 (ENSSVLG00005005495) #25	BCL2 (ENSSVLG00005005581) #27	KDSR (ENSSVLG00005005623) #28	VPS4B (ENSSVLG00005005723) #29	SERPINB5 (ENSSVLG00005005814) #30	SERPINB12 (ENSSVLG00005005864) #32	SERPINB13 (ENSSVLG00005005921) #33	ENSSVLG00005006246 #34	SERPINB11 (ENSSVLG00005007244) #35	SERPINB7 (ENSSVLG00005007358) #36	SERPINB2 (ENSSVLG00005007425) #37
Hystricomorpha	ANCESTRAL SPECIES	32	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000154835.C	ENSGT00940000157031
Hystricomorpha_a	ANCESTRAL SPECIES	26	ENSGT00940000160524	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000154835.C	ENSGT00940000157031
Guinea pig	MODERN SPECIES	14	MALT1 (ENSCPOG00000012493)	ZNF532 (ENSCPOG00000005888)	ENSCPOG00000024696	SEC11C (ENSCPOG00000011924)	GRP (ENSCPOG00000027452) #7	RAX (ENSCPOG00000014550) #8	CPLX4 (ENSCPOG00000014552) #9	LMAN1 (ENSCPOG00000011404) #10	CCBE1 (ENSCPOG00000015287) #11	ENSCPOG00000038037	Mc4r (ENSCPOG00000007442) #16	CDH20 (ENSCPOG00000006022) #17	ENSCPOG00000036140	RNF152 (ENSCPOG00000038755) #20	PIGN (ENSCPOG00000005937) #21	RELCH (ENSCPOG00000015242) #22	TNFRSF11A (ENSCPOG00000015245) #23	ZCCHC2 (ENSCPOG00000014085) #24	PHLPP1 (ENSCPOG00000001553) #25	BCL2 (ENSCPOG00000024581) #27	KDSR (ENSCPOG00000033285) #28	VPS4B (ENSCPOG00000014419) #29	ENSCPOG00000013882 #30	ENSCPOG00000033981	SERPINB12 (ENSCPOG00000006906) #32	SERPINB13 (ENSCPOG00000002279) #33	ENSCPOG00000010938 #34	ENSCPOG00000014990 #34	ENSCPOG00000025818 #35	ENSCPOG00000004922 #36	SERPINB2 (ENSCPOG00000000088) #37
Hystricomorpha_b	ANCESTRAL SPECIES	21	ENSGT00940000156873	ENSGT00940000160524	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000154835.C	ENSGT00940000157031
Degu	MODERN SPECIES	138												MC4R (ENSODEG00000019393) #16	CDH20 (ENSODEG00000005474) #17	RNF152 (ENSODEG00000019242) #20	PIGN (ENSODEG00000005395) #21	RELCH (ENSODEG00000005369) #22	ZCCHC2 (ENSODEG00000005310) #24	BCL2 (ENSODEG00000005287) #27	KDSR (ENSODEG00000005258) #28	VPS4B (ENSODEG00000005230) #29	ENSODEG00000005222	SERPINB5 (ENSODEG00000005216) #30	ENSODEG00000019230	ENSODEG00000005206 #36	SERPINB2 (ENSODEG00000005185) #37	ENSODEG00000019197	CDH7 (ENSODEG00000005126)	CDH19 (ENSODEG00000005082)	ENSODEG00000005064	ENSODEG00000005052	ENSODEG00000005594
Long-tailed chinchilla	MODERN SPECIES	109	ENSCLAG00000008279	SEC11C (ENSCLAG00000009984)	GRP (ENSCLAG00000013287) #7	RAX (ENSCLAG00000007539) #8	CPLX4 (ENSCLAG00000008273) #9	LMAN1 (ENSCLAG00000009817) #10	CCBE1 (ENSCLAG00000013520) #11	ENSCLAG00000017961	ENSCLAG00000014827	ENSCLAG00000017707	ENSCLAG00000010422	MC4R (ENSCLAG00000017847) #16	CDH20 (ENSCLAG00000009269) #17	RNF152 (ENSCLAG00000007146) #20	PIGN (ENSCLAG00000009042) #21	RELCH (ENSCLAG00000007772) #22	TNFRSF11A (ENSCLAG00000009504) #23	ZCCHC2 (ENSCLAG00000010985) #24	PHLPP1 (ENSCLAG00000009105) #25	BCL2 (ENSCLAG00000011104) #27	KDSR (ENSCLAG00000007841) #28	VPS4B (ENSCLAG00000009108) #29	ENSCLAG00000008326	SERPINB5 (ENSCLAG00000009512) #30	SERPINB12 (ENSCLAG00000010100) #32	ENSCLAG00000007728 #33	ENSCLAG00000009434 #34	SERPINB11 (ENSCLAG00000010485) #35	SERPINB7 (ENSCLAG00000010465) #36	SERPINB2 (ENSCLAG00000011771) #37	SERPINB8 (ENSCLAG00000008433)
Naked mole-rat female	MODERN SPECIES	9	ENSHGLG00000018589 #11	ENSHGLG00000043155	PMAIP1 (ENSHGLG00000050640)	ENSHGLG00000018613	ENSHGLG00000044380	ENSHGLG00000050854	ENSHGLG00000034066	ENSHGLG00000021304 #16	ENSHGLG00000032638	ENSHGLG00000019001 #17	ENSHGLG00000029956	RNF152 (ENSHGLG00000019011) #20	ENSHGLG00000008617	PIGN (ENSHGLG00000019018) #21	ENSHGLG00000042910	RELCH (ENSHGLG00000001908) #22	TNFRSF11A (ENSHGLG00000002220) #23	ENSHGLG00000040082	ENSHGLG00000046800	ZCCHC2 (ENSHGLG00000002443) #24	PHLPP1 (ENSHGLG00000002915) #25	ENSHGLG00000002979	BCL2 (ENSHGLG00000003110) #27	ENSHGLG00000050497	KDSR (ENSHGLG00000038343) #28	ENSHGLG00000001894 #29	SERPINB5 (ENSHGLG00000050355) #30	SERPINB12 (ENSHGLG00000002022) #32	SERPINB13 (ENSHGLG00000002083) #33	SERPINB4 (ENSHGLG00000035185) #34	ENSHGLG00000002364 #34
Lagomorpha	ANCESTRAL SPECIES	29	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00860000135405	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C
Rabbit	MODERN SPECIES	20	SEC11C (ENSOCUG00000009204)	GRP (ENSOCUG00000009211) #7	ENSOCUG00000010455	CPLX4 (ENSOCUG00000003194) #9	LMAN1 (ENSOCUG00000003199) #10	CCBE1 (ENSOCUG00000003209) #11	ENSOCUG00000034967	ENSOCUG00000036947	PMAIP1 (ENSOCUG00000031526)	MC4R (ENSOCUG00000025457) #16	ENSOCUG00000022124	CDH20 (ENSOCUG00000014561) #17	ENSOCUG00000038689	RNF152 (ENSOCUG00000017018) #20	PIGN (ENSOCUG00000005271) #21	RELCH (ENSOCUG00000005291) #22	ENSOCUG00000005308 #23	ZCCHC2 (ENSOCUG00000012130) #24	PHLPP1 (ENSOCUG00000015736) #25	ENSOCUG00000025312 #27	KDSR (ENSOCUG00000014159) #28	VPS4B (ENSOCUG00000007150) #29	SERPINB5 (ENSOCUG00000016787) #30	SERPINB12 (ENSOCUG00000021618) #32	SERPINB13 (ENSOCUG00000004530) #33	ENSOCUG00000010529 #34	SERPINB11 (ENSOCUG00000009148) #35	SERPINB7 (ENSOCUG00000014443) #36	SERPINB2 (ENSOCUG00000014452) #37	SERPINB10 (ENSOCUG00000007795)	SERPINB8 (ENSOCUG00000006863)
Pika	MODERN SPECIES	4411															PIGN (ENSOPRG00000006993) #21	RELCH (ENSOPRG00000007038) #22	TNFRSF11A (ENSOPRG00000007075) #23
Laurasiatheria	ANCESTRAL SPECIES	23	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C
Eulipotyphla	ANCESTRAL SPECIES	1110															ENSGT00390000017600 #21	ENSGT00390000004385 #22
Hedgehog	MODERN SPECIES	3113																RELCH (ENSEEUG00000001806) #22
Common shrew	MODERN SPECIES	6473															PIGN (ENSSARG00000003378) #21	RELCH (ENSSARG00000003451) #22
Laurasiatheria_a	ANCESTRAL SPECIES	13	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161205.j	ENSGT00940000161637 #37	ENSGT00940000161205.i
Artiodactyla	ANCESTRAL SPECIES	17	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161205.j	ENSGT00940000161637 #37	ENSGT00940000161205.i
Suina	ANCESTRAL SPECIES	12	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161205.j	ENSGT00940000161637 #37	ENSGT00940000161205.i
Pig	MODERN SPECIES		ZNF532 (ENSSSCG00000034704)	ENSSSCG00000004911	SEC11C (ENSSSCG00000004912)	GRP (ENSSSCG00000037300) #7	RAX (ENSSSCG00000004910) #8	CPLX4 (ENSSSCG00000004909) #9	LMAN1 (ENSSSCG00000004908) #10	CCBE1 (ENSSSCG00000004907) #11	PMAIP1 (ENSSSCG00000026454)	MC4R (ENSSSCG00000051798) #16	ENSSSCG00000036234	ENSSSCG00000048538	CDH20 (ENSSSCG00000004903) #17	RNF152 (ENSSSCG00000004902) #20	PIGN (ENSSSCG00000004901) #21	RELCH (ENSSSCG00000004899) #22	TNFRSF11A (ENSSSCG00000004898) #23	ZCCHC2 (ENSSSCG00000004897) #24	PHLPP1 (ENSSSCG00000004896) #25	BCL2 (ENSSSCG00000062696) #27	KDSR (ENSSSCG00000025744) #28	VPS4B (ENSSSCG00000004893) #29	SERPINB5 (ENSSSCG00000004894) #30	SERPINB12 (ENSSSCG00000039151) #32	SERPINB13 (ENSSSCG00000034519) #33	ENSSSCG00000055924 #34	ENSSSCG00000054030 #34	ENSSSCG00000033560 #34	ENSSSCG00000059966 #34	SERPINB11 (ENSSSCG00000022337) #35	SERPINB7 (ENSSSCG00000004891) #36
Chacoan peccary	MODERN SPECIES	787													CDH20 (ENSCWAG00000007315) #17	RNF152 (ENSCWAG00000007367) #20	PIGN (ENSCWAG00000007417) #21	RELCH (ENSCWAG00000007661) #22	TNFRSF11A (ENSCWAG00000007783) #23	ZCCHC2 (ENSCWAG00000008848) #24
Artiodactyla_a	ANCESTRAL SPECIES	17	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161205.j	ENSGT00940000161637 #37	ENSGT00940000161205.i
Camelidae	ANCESTRAL SPECIES	53	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00860000135405	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00900000143675 #19	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.h.a #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161205.j	ENSGT00940000161637 #37	ENSGT00940000161205.i
Arabian camel	MODERN SPECIES	23	ZNF532 (ENSCDRG00005019327)	ENSCDRG00005019306	SEC11C (ENSCDRG00005019271)	GRP (ENSCDRG00005019247) #7	ENSCDRG00005019232	CPLX4 (ENSCDRG00005019213) #9	LMAN1 (ENSCDRG00005019120) #10	CCBE1 (ENSCDRG00005019050) #11	ENSCDRG00005019036	MC4R (ENSCDRG00005019025) #16	ENSCDRG00005018939	CDH20 (ENSCDRG00005018897) #17	ENSCDRG00005018884 #19	RNF152 (ENSCDRG00005018871) #20	PIGN (ENSCDRG00005018308) #21	RELCH (ENSCDRG00005017806) #22	TNFRSF11A (ENSCDRG00005017584) #23	ZCCHC2 (ENSCDRG00005017495) #24	PHLPP1 (ENSCDRG00005016451) #25	BCL2 (ENSCDRG00005016315) #27	KDSR (ENSCDRG00005016212) #28	VPS4B (ENSCDRG00005016149) #29	SERPINB5 (ENSCDRG00005016094) #30	SERPINB12 (ENSCDRG00005016035) #32	SERPINB13 (ENSCDRG00005015959) #33	ENSCDRG00005014431 #34	ENSCDRG00005014125 #34	ENSCDRG00005014068 #34	SERPINB11 (ENSCDRG00005013883) #35	SERPINB7 (ENSCDRG00005013750) #36	ENSCDRG00005013682
Alpaca	MODERN SPECIES	1716												MC4R (ENSVPAG00000009923) #16	CDH20 (ENSVPAG00000009924) #17	RNF152 (ENSVPAG00000009925) #20	PIGN (ENSVPAG00000009926) #21	RELCH (ENSVPAG00000009931) #22	ZCCHC2 (ENSVPAG00000009934) #24	ENSVPAG00000009935 #25
Artiodactyla_b	ANCESTRAL SPECIES	10	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161205.j	ENSGT00940000161637 #37	ENSGT00940000161205.i
Cetacea	ANCESTRAL SPECIES	11	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000154520 #34	ENSGT00940000161205.j	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C	ENSGT00940000157031	ENSGT00940000160137
Blue whale	MODERN SPECIES	5	SEC11C (ENSBMSG00010012060)	GRP (ENSBMSG00010012076) #7	RAX (ENSBMSG00010012086) #8	CPLX4 (ENSBMSG00010012103) #9	LMAN1 (ENSBMSG00010012124) #10	CCBE1 (ENSBMSG00010012156) #11	PMAIP1 (ENSBMSG00010012168)	MC4R (ENSBMSG00010012174) #16	ENSBMSG00010012188	ENSBMSG00010012205	ENSBMSG00010012212	CDH20 (ENSBMSG00010012219) #17	RNF152 (ENSBMSG00010012226) #20	ENSBMSG00010012234 #21	ENSBMSG00010012249 #21	RELCH (ENSBMSG00010012278) #22	TNFRSF11A (ENSBMSG00010012355) #23	ZCCHC2 (ENSBMSG00010012471) #24	PHLPP1 (ENSBMSG00010012506) #25	BCL2 (ENSBMSG00010012548) #27	KDSR (ENSBMSG00010012563) #28	VPS4B (ENSBMSG00010012587) #29	SERPINB5 (ENSBMSG00010012616) #30	ENSBMSG00010012627 #32	ENSBMSG00010012657 #34	ENSBMSG00010012745 #34	ENSBMSG00010012791	SERPINB2 (ENSBMSG00010012803) #37	SERPINB10 (ENSBMSG00010012811)	SERPINB8 (ENSBMSG00010012832)	ENSBMSG00010012856
Odontoceti	ANCESTRAL SPECIES	10	ENSGT00940000160524	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161205.j	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C	ENSGT00940000157031	ENSGT00940000160137	ENSGT00390000006522.a	ENSGT00930000151022
Sperm whale	MODERN SPECIES	10	NEDD4L (ENSPCTG00005006315)	MALT1 (ENSPCTG00005007179)	ENSPCTG00005007364	SEC11C (ENSPCTG00005007419)	GRP (ENSPCTG00005007446) #7	RAX (ENSPCTG00005007481) #8	CPLX4 (ENSPCTG00005007502) #9	LMAN1 (ENSPCTG00005007532) #10	CCBE1 (ENSPCTG00005007619) #11	PMAIP1 (ENSPCTG00005007700)	MC4R (ENSPCTG00005007712) #16	ENSPCTG00005007719	CDH20 (ENSPCTG00005007733) #17	RNF152 (ENSPCTG00005007763) #20	PIGN (ENSPCTG00005007788) #21	RELCH (ENSPCTG00005007916) #22	TNFRSF11A (ENSPCTG00005008159) #23	ZCCHC2 (ENSPCTG00005008850) #24	PHLPP1 (ENSPCTG00005008994) #25	BCL2 (ENSPCTG00005009169) #27	KDSR (ENSPCTG00005009238) #28	VPS4B (ENSPCTG00005009408) #29	SERPINB5 (ENSPCTG00005009477) #30	ENSPCTG00005009522	SERPINB2 (ENSPCTG00005009549) #37	SERPINB10 (ENSPCTG00005009593)	SERPINB8 (ENSPCTG00005009653)	CDH7 (ENSPCTG00005009714)	CDH19 (ENSPCTG00005009951)	TMX3 (ENSPCTG00005010175)	CCDC102B (ENSPCTG00005010246)
Odontoceti_a	ANCESTRAL SPECIES	9	ENSGT00940000160524	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000154520 #34	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C	ENSGT00940000157031	ENSGT00940000160137	ENSGT00390000006522.a	ENSGT00930000151022
Odontoceti_b	ANCESTRAL SPECIES	10	ENSGT00940000160524	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000154520 #34	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C	ENSGT00940000157031	ENSGT00940000160137	ENSGT00390000012916.y.b.b.b	ENSGT00390000006522.a
Monodontidae	ANCESTRAL SPECIES	8	ENSGT01100000263514.B.l	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00390000010712.f	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000154520 #34	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C	ENSGT00940000157031	ENSGT00940000160137	ENSGT00390000012916.y.b.b.b
Beluga whale	MODERN SPECIES	25	MALT1 (ENSDLEG00000003899)	ZNF532 (ENSDLEG00000003888)	SEC11C (ENSDLEG00000003860)	GRP (ENSDLEG00000003843) #7	RAX (ENSDLEG00000003829) #8	CPLX4 (ENSDLEG00000003820) #9	LMAN1 (ENSDLEG00000003780) #10	CCBE1 (ENSDLEG00000003769) #11	ENSDLEG00000003764	PMAIP1 (ENSDLEG00000003760)	MC4R (ENSDLEG00000003758) #16	ENSDLEG00000003754	CDH20 (ENSDLEG00000003729) #17	RNF152 (ENSDLEG00000003727) #20	PIGN (ENSDLEG00000003705) #21	KIAA1468 (ENSDLEG00000003662) #22	TNFRSF11A (ENSDLEG00000003648) #23	ZCCHC2 (ENSDLEG00000003630) #24	ENSDLEG00000003619	PHLPP1 (ENSDLEG00000003599) #25	BCL2 (ENSDLEG00000003593) #27	KDSR (ENSDLEG00000003587) #28	VPS4B (ENSDLEG00000003576) #29	SERPINB5 (ENSDLEG00000003567) #30	ENSDLEG00000003558 #34	SERPINB2 (ENSDLEG00000003550) #37	SERPINB10 (ENSDLEG00000003545)	SERPINB8 (ENSDLEG00000003542)	CDH7 (ENSDLEG00000003535)	CDH19 (ENSDLEG00000003525)	ENSDLEG00000003520
Narwhal	MODERN SPECIES	295	MALT1 (ENSMMNG00015005277)	ZNF532 (ENSMMNG00015005250)	SEC11C (ENSMMNG00015005226)	ENSMMNG00015005212 #7	RAX (ENSMMNG00015005203) #8	CPLX4 (ENSMMNG00015005186) #9	LMAN1 (ENSMMNG00015005162) #10	CCBE1 (ENSMMNG00015005148) #11	PMAIP1 (ENSMMNG00015005138)	MC4R (ENSMMNG00015005133) #16	ENSMMNG00015005122	ENSMMNG00015005114	CDH20 (ENSMMNG00015005103) #17	RNF152 (ENSMMNG00015005092) #20	PIGN (ENSMMNG00015005033) #21	RELCH (ENSMMNG00015004983) #22	TNFRSF11A (ENSMMNG00015004914) #23	ZCCHC2 (ENSMMNG00015004878) #24	ENSMMNG00015004873	PHLPP1 (ENSMMNG00015004868) #25	BCL2 (ENSMMNG00015004863) #27	KDSR (ENSMMNG00015004859) #28	VPS4B (ENSMMNG00015004847) #29	SERPINB5 (ENSMMNG00015004834) #30	ENSMMNG00015004800 #34	SERPINB2 (ENSMMNG00015004786) #37	SERPINB10 (ENSMMNG00015004783)	SERPINB8 (ENSMMNG00015004778)	CDH7 (ENSMMNG00015004771)	CDH19 (ENSMMNG00015004761)	ENSMMNG00015004758
Vaquita	MODERN SPECIES	5	NARS1 (ENSPSNG00000004542)	ATP8B1 (ENSPSNG00000021625)	NEDD4L (ENSPSNG00000021237)	MALT1 (ENSPSNG00000020856)	ZNF532 (ENSPSNG00000020766)	SEC11C (ENSPSNG00000020707)	GRP (ENSPSNG00000020621) #7	RAX (ENSPSNG00000020592) #8	CPLX4 (ENSPSNG00000020549) #9	LMAN1 (ENSPSNG00000020472) #10	CCBE1 (ENSPSNG00000020391) #11	MC4R (ENSPSNG00000020361) #16	ENSPSNG00000020334	CDH20 (ENSPSNG00000020274) #17	PIGN (ENSPSNG00000019969) #21	RELCH (ENSPSNG00000019818) #22	TNFRSF11A (ENSPSNG00000019452) #23	ZCCHC2 (ENSPSNG00000019234) #24	PHLPP1 (ENSPSNG00000018953) #25	BCL2 (ENSPSNG00000018915) #27	KDSR (ENSPSNG00000018828) #28	VPS4B (ENSPSNG00000018789) #29	SERPINB5 (ENSPSNG00000018661) #30	ENSPSNG00000018474 #34	SERPINB2 (ENSPSNG00000018420) #37	SERPINB10 (ENSPSNG00000018388)	SERPINB8 (ENSPSNG00000018298)	CDH7 (ENSPSNG00000018107)	CDH19 (ENSPSNG00000017916)	ENSPSNG00000017890	DSEL (ENSPSNG00000017875)
Dolphin	MODERN SPECIES	2599															PIGN (ENSTTRG00000013496) #21	RELCH (ENSTTRG00000013517) #22	TNFRSF11A (ENSTTRG00000013532) #23	ZCCHC2 (ENSTTRG00000013533) #24
Pecora	ANCESTRAL SPECIES	26	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.k.a #34	ENSGT00940000154520.k.b #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36
Percora_a	ANCESTRAL SPECIES	28	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.k.a #34	ENSGT00940000154520.k.b #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161205.j	ENSGT00940000161637.b #37
Siberian musk deer	MODERN SPECIES	144	MALT1 (ENSMMSG00000002981)	ZNF532 (ENSMMSG00000002920)	ENSMMSG00000002882	SEC11C (ENSMMSG00000002858)	GRP (ENSMMSG00000002838) #7	RAX (ENSMMSG00000002822) #8	CPLX4 (ENSMMSG00000002798) #9	LMAN1 (ENSMMSG00000002761) #10	CCBE1 (ENSMMSG00000002740) #11	PMAIP1 (ENSMMSG00000002726)	MC4R (ENSMMSG00000002721) #16	ENSMMSG00000002656	CDH20 (ENSMMSG00000002618) #17	RNF152 (ENSMMSG00000002604) #20	PIGN (ENSMMSG00000002344) #21	RELCH (ENSMMSG00000002196) #22	ENSMMSG00000002156 #23	ZCCHC2 (ENSMMSG00000002106) #24	PHLPP1 (ENSMMSG00000001825) #25	BCL2 (ENSMMSG00000001765) #27	KDSR (ENSMMSG00000001728) #28	VPS4B (ENSMMSG00000001697) #29	SERPINB5 (ENSMMSG00000001683) #30	SERPINB12 (ENSMMSG00000001662) #32	SERPINB13 (ENSMMSG00000001651) #33	ENSMMSG00000001630 #34	ENSMMSG00000001610 #34	SERPINB11 (ENSMMSG00000001585) #35	ENSMMSG00000001571	ENSMMSG00000001563 #36	ENSMMSG00000001553 #36
Bovidae	ANCESTRAL SPECIES	28	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.k.a #34	ENSGT00940000154520.k.b #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161205.j	ENSGT00940000161637.b #37
Bovinae	ANCESTRAL SPECIES	28	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT01000000214669.e.b	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.k.a.a #34	ENSGT00940000154520.k.a.b.a #34	ENSGT00940000154520.k.b #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161205.j
American bison	MODERN SPECIES	3263	MALT1 (ENSBBBG00000019928)	ZNF532 (ENSBBBG00000019954)	ENSBBBG00000019963	SEC11C (ENSBBBG00000019988)	ENSBBBG00000019990	CPLX4 (ENSBBBG00000019998) #9	LMAN1 (ENSBBBG00000005108) #10	CCBE1 (ENSBBBG00000020022) #11	PMAIP1 (ENSBBBG00000005421)	MC4R (ENSBBBG00000020030) #16	ENSBBBG00000005073	ENSBBBG00000005443	CDH20 (ENSBBBG00000020184) #17	RNF152 (ENSBBBG00000007322) #20	PIGN (ENSBBBG00000021412) #21	RELCH (ENSBBBG00000021653) #22	TNFRSF11A (ENSBBBG00000005766) #23	ENSBBBG00000021725 #24	ENSBBBG00000021762 #25	BCL2 (ENSBBBG00000005779) #27	KDSR (ENSBBBG00000021856) #28	VPS4B (ENSBBBG00000021877) #29	SERPINB5 (ENSBBBG00000008373) #30	SERPINB12 (ENSBBBG00000021909) #32	SERPINB13 (ENSBBBG00000021922) #33	ENSBBBG00000021932 #34	ENSBBBG00000021960 #34	ENSBBBG00000021995 #34	ENSBBBG00000022004 #35	SERPINB7 (ENSBBBG00000022051) #36	ENSBBBG00000022064 #34
Bos	ANCESTRAL SPECIES	29	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT01000000214669.e.b	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.k.a.a #34	ENSGT00940000154520.k.a.b.b.a #34	ENSGT00940000161560.g #35	ENSGT00940000161520 #36	ENSGT00940000161205.j	ENSGT00940000161637.b #37
Bos_b	ANCESTRAL SPECIES	34	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT01000000214669.e.b	ENSGT00940000165206	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.k.a.b.b.a.a #34	ENSGT00940000161560.g #35	ENSGT00940000161520 #36	ENSGT00940000161205.j	ENSGT00940000161637.b #37	ENSGT00940000161205.i
Hybrid Bos Indicus	MODERN SPECIES	16	RAX (ENSBIXG00005022278) #8	CPLX4 (ENSBIXG00005022259) #9	LMAN1 (ENSBIXG00005022240) #10	CCBE1 (ENSBIXG00005022180) #11	PMAIP1 (ENSBIXG00005003763)	ENSBIXG00005003756	MC4R (ENSBIXG00005022078) #16	ENSBIXG00005022057	ENSBIXG00005022014	ENSBIXG00005021995	ENSBIXG00005021987	CDH20 (ENSBIXG00005021946) #17	RNF152 (ENSBIXG00005007843) #20	PIGN (ENSBIXG00005021798) #21	ENSBIXG00005021132	RELCH (ENSBIXG00005021091) #22	ENSBIXG00005003540	TNFRSF11A (ENSBIXG00005020920) #23	ZCCHC2 (ENSBIXG00005020737) #24	PHLPP1 (ENSBIXG00005020653) #25	ENSBIXG00005020407	ENSBIXG00005003442	BCL2 (ENSBIXG00005020390) #27	KDSR (ENSBIXG00005007210) #28	VPS4B (ENSBIXG00005020282) #29	SERPINB5 (ENSBIXG00005020257) #30	SERPINB12 (ENSBIXG00005003363) #32	SERPINB13 (ENSBIXG00005003355) #33	ENSBIXG00005020160 #34	ENSBIXG00005006455 #34	ENSBIXG00005000026 #34
Cow	MODERN SPECIES	16	OACYL (ENSBTAG00000022829)	SEC11C (ENSBTAG00000011954)	GRP (ENSBTAG00000004796) #7	RAX (ENSBTAG00000022826) #8	CPLX4 (ENSBTAG00000038739) #9	LMAN1 (ENSBTAG00000006833) #10	CCBE1 (ENSBTAG00000008723) #11	PMAIP1 (ENSBTAG00000049851)	MC4R (ENSBTAG00000019676) #16	ENSBTAG00000000531	ENSBTAG00000054502	ENSBTAG00000047569	CDH20 (ENSBTAG00000001739) #17	RNF152 (ENSBTAG00000050028) #20	PIGN (ENSBTAG00000016663) #21	RELCH (ENSBTAG00000016666) #22	TNFRSF11A (ENSBTAG00000007569) #23	ZCCHC2 (ENSBTAG00000050848) #24	PHLPP1 (ENSBTAG00000045832) #25	BCL2 (ENSBTAG00000019302) #27	KDSR (ENSBTAG00000007723) #28	VPS4B (ENSBTAG00000010492) #29	SERPINB5 (ENSBTAG00000002019) #30	SERPINB12 (ENSBTAG00000035171) #32	SERPINB13 (ENSBTAG00000035182) #33	ENSBTAG00000054882 #34	ENSBTAG00000048835 #34	ENSBTAG00000052162 #34	ENSBTAG00000051132 #34	ENSBTAG00000048720 #34	ENSBTAG00000052206 #35
Bos_a	ANCESTRAL SPECIES	28	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000167592	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000153786.e.a.a.ab	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.k.a.a #34	ENSGT00940000154520.k.a.b.b.a #34	ENSGT00940000161560.g #35	ENSGT00940000161520 #36	ENSGT00940000161205.j	ENSGT00940000161637.b #37
Domestic yak	MODERN SPECIES	13	CPLX4 (ENSBGRG00000015391) #9	LMAN1 (ENSBGRG00000015446) #10	CCBE1 (ENSBGRG00000015792) #11	ENSBGRG00000015958	PMAIP1 (ENSBGRG00000015982)	MC4R (ENSBGRG00000016023) #16	ENSBGRG00000016053	ENSBGRG00000016227	ENSBGRG00000016258	ENSBGRG00000016321	ENSBGRG00000016372	ENSBGRG00000016450	CDH20 (ENSBGRG00000016472) #17	RNF152 (ENSBGRG00000016707) #20	PIGN (ENSBGRG00000016802) #21	RELCH (ENSBGRG00000017550) #22	TNFRSF11A (ENSBGRG00000018261) #23	ZCCHC2 (ENSBGRG00000018501) #24	BCL2 (ENSBGRG00000019339) #27	ENSBGRG00000019385	KDSR (ENSBGRG00000019413) #28	VPS4B (ENSBGRG00000019724) #29	SERPINB5 (ENSBGRG00000019802) #30	SERPINB12 (ENSBGRG00000019909) #32	SERPINB13 (ENSBGRG00000019989) #33	ENSBGRG00000020145 #34	ENSBGRG00000020306 #34	ENSBGRG00000020337 #34	ENSBGRG00000020456 #34	ENSBGRG00000020687 #35	SERPINB7 (ENSBGRG00000020739) #36
Wild yak	MODERN SPECIES	2655															PIGN (ENSBMUG00000016874) #21	RELCH (ENSBMUG00000017768) #22	ENSBMUG00000017841 #23	ENSBMUG00000017890 #24
Caprinae	ANCESTRAL SPECIES	25	ENSGT00940000154437	ENSGT00530000063340	ENSGT01030000234515.a.a.a.d	ENSGT00390000015600.c.b.i	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.k.a #34	ENSGT00940000154520.k.b #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637.b #37	ENSGT00940000161205.i
Rambouillet Sheep	MODERN SPECIES	15	MALT1 (ENSOARG00020024815)	ZNF532 (ENSOARG00020024903)	ENSOARG00020024948	SEC11C (ENSOARG00020024983)	GRP (ENSOARG00020024998) #7	RAX (ENSOARG00020025018) #8	CPLX4 (ENSOARG00020025036) #9	LMAN1 (ENSOARG00020025068) #10	CCBE1 (ENSOARG00020025128) #11	PMAIP1 (ENSOARG00020025166)	MC4R (ENSOARG00020025172) #16	ENSOARG00020025202	ENSOARG00020025338	CDH20 (ENSOARG00020025345) #17	RNF152 (ENSOARG00020025353) #20	RELCH (ENSOARG00020025752) #22	ENSOARG00020025770 #23	GLRX5 (ENSOARG00020025779)	PHLPP1 (ENSOARG00020025801) #25	BCL2 (ENSOARG00020025848) #27	KDSR (ENSOARG00020025857) #28	ENSOARG00020025868 #29	ENSOARG00020025872	ENSOARG00020025877 #29	SERPINB5 (ENSOARG00020025880) #30	SERPINB12 (ENSOARG00020025883) #32	SERPINB13 (ENSOARG00020025887) #33	ENSOARG00020025894 #34	ENSOARG00020014134 #34	SERPINB11 (ENSOARG00020014164) #35	ENSOARG00020014339 #36
Goat	MODERN SPECIES	16	ZNF532 (ENSCHIG00000009576)	ENSCHIG00000014814	ENSCHIG00000019933	ENSCHIG00000006738	GRP (ENSCHIG00000011669) #7	RAX (ENSCHIG00000015602) #8	CPLX4 (ENSCHIG00000021586) #9	LMAN1 (ENSCHIG00000025626) #10	CCBE1 (ENSCHIG00000000465) #11	PMAIP1 (ENSCHIG00000015971)	MC4R (ENSCHIG00000004552) #16	ENSCHIG00000021058	CDH20 (ENSCHIG00000026830) #17	RNF152 (ENSCHIG00000011340) #20	PIGN (ENSCHIG00000023320) #21	RELCH (ENSCHIG00000018243) #22	TNFRSF11A (ENSCHIG00000025614) #23	ZCCHC2 (ENSCHIG00000016298) #24	PHLPP1 (ENSCHIG00000020910) #25	BCL2 (ENSCHIG00000016322) #27	KDSR (ENSCHIG00000020825) #28	VPS4B (ENSCHIG00000003788) #29	SERPINB5 (ENSCHIG00000010978) #30	SERPINB12 (ENSCHIG00000018378) #32	SERPINB13 (ENSCHIG00000016340) #33	ENSCHIG00000016021 #34	ENSCHIG00000012186 #34	SERPINB11 (ENSCHIG00000020122) #35	SERPINB7 (ENSCHIG00000006757) #36	ENSCHIG00000017433 #37	ENSCHIG00000021699
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	19	ZNF532 (ENSCHYG00000022867)	ENSCHYG00000022857	ENSCHYG00000022787	ENSCHYG00000022654	ENSCHYG00000022615 #7	RAX (ENSCHYG00000022573) #8	CPLX4 (ENSCHYG00000022498) #9	LMAN1 (ENSCHYG00000022357) #10	CCBE1 (ENSCHYG00000022255) #11	PMAIP1 (ENSCHYG00000022217)	MC4R (ENSCHYG00000022195) #16	ENSCHYG00000022006	CDH20 (ENSCHYG00000021863) #17	RNF152 (ENSCHYG00000021848) #20	ENSCHYG00000020792 #21	RELCH (ENSCHYG00000019473) #22	TNFRSF11A (ENSCHYG00000019238) #23	ZCCHC2 (ENSCHYG00000019039) #24	PHLPP1 (ENSCHYG00000015304) #25	BCL2 (ENSCHYG00000015003) #27	KDSR (ENSCHYG00000014609) #28	VPS4B (ENSCHYG00000014405) #29	SERPINB5 (ENSCHYG00000014286) #30	SERPINB12 (ENSCHYG00000014170) #32	SERPINB13 (ENSCHYG00000014003) #33	ENSCHYG00000027049 #35	ENSCHYG00000027046 #36	ENSCHYG00000027038	ENSCHYG00000027035 #37	ENSCHYG00000027030	ENSCHYG00000027027
Yarkand deer	MODERN SPECIES	33	POU2F1 (ENSCHYG00000011794)	CD247 (ENSCHYG00000011960)	CREG1 (ENSCHYG00000012045)	RCSD1 (ENSCHYG00000012103)	MPZL1 (ENSCHYG00000012224)	ADCY10 (ENSCHYG00000012383)	ENSCHYG00000012929	DCAF6 (ENSCHYG00000013034)	ENSCHYG00000015797	GPR161 (ENSCHYG00000015845)	TIPRL (ENSCHYG00000015907)	SFT2D2 (ENSCHYG00000016084)	TBX19 (ENSCHYG00000016293)	ENSCHYG00000016465	ENSCHYG00000016534 #21	ENSCHYG00000017045 #22
Laurasiatheria_b	ANCESTRAL SPECIES	13	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161205.j	ENSGT00940000161637 #37	ENSGT00940000161205.i
Carnivora	ANCESTRAL SPECIES	13	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT01080000258447	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C
Felidae	ANCESTRAL SPECIES	24	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT01080000258447	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C
Panthera	ANCESTRAL SPECIES	24	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT01080000258447	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C
Tiger	MODERN SPECIES	143	ALPK2 (ENSPTIG00000019056)	MALT1 (ENSPTIG00000017119)	ZNF532 (ENSPTIG00000016323)	ENSPTIG00000014327	SEC11C (ENSPTIG00000012346)	ENSPTIG00000011835	CPLX4 (ENSPTIG00000011458) #9	LMAN1 (ENSPTIG00000008476) #10	CCBE1 (ENSPTIG00000006695) #11	ENSPTIG00000005925	PMAIP1 (ENSPTIG00000003837)	MC4R (ENSPTIG00000000125) #16	CDH20 (ENSPTIG00000021141) #17	RNF152 (ENSPTIG00000007376) #20	PIGN (ENSPTIG00000000681) #21	RELCH (ENSPTIG00000014673) #22	TNFRSF11A (ENSPTIG00000011264) #23	ZCCHC2 (ENSPTIG00000008924) #24
Panthera_a	ANCESTRAL SPECIES	26	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT01080000258447	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C
leopard	MODERN SPECIES	43	GRP (ENSPPRG00000009779) #7	RAX (ENSPPRG00000009829) #8	CPLX4 (ENSPPRG00000010034) #9	LMAN1 (ENSPPRG00000010591) #10	CCBE1 (ENSPPRG00000011414) #11	ENSPPRG00000011856	PMAIP1 (ENSPPRG00000011943)	MC4R (ENSPPRG00000019070) #16	ENSPPRG00000015322	ENSPPRG00000016356	ENSPPRG00000016733	CDH20 (ENSPPRG00000018792) #17	RNF152 (ENSPPRG00000019341) #20	ENSPPRG00000023564	PIGN (ENSPPRG00000025079) #21	RELCH (ENSPPRG00000024699) #22	ENSPPRG00000023539 #23	ZCCHC2 (ENSPPRG00000000176) #24	PHLPP1 (ENSPPRG00000000906) #25	BCL2 (ENSPPRG00000001150) #27	KDSR (ENSPPRG00000002009) #28	VPS4B (ENSPPRG00000002454) #29	SERPINB5 (ENSPPRG00000002957) #30	SERPINB12 (ENSPPRG00000003676) #32	SERPINB13 (ENSPPRG00000004905) #33	ENSPPRG00000009139 #34	SERPINB11 (ENSPPRG00000009877) #35	SERPINB7 (ENSPPRG00000016416) #36	SERPINB2 (ENSPPRG00000017229) #37	SERPINB10 (ENSPPRG00000018460)	SERPINB8 (ENSPPRG00000021063)
lion	MODERN SPECIES	12	GRP (ENSPLOG00000008190) #7	RAX (ENSPLOG00000008159) #8	CPLX4 (ENSPLOG00000008101) #9	LMAN1 (ENSPLOG00000007997) #10	CCBE1 (ENSPLOG00000016148) #11	ENSPLOG00000016108	PMAIP1 (ENSPLOG00000016076)	MC4R (ENSPLOG00000016055) #16	ENSPLOG00000015952	ENSPLOG00000015902	ENSPLOG00000015870	CDH20 (ENSPLOG00000015784) #17	RNF152 (ENSPLOG00000015764) #20	ENSPLOG00000015732	PIGN (ENSPLOG00000015353) #21	RELCH (ENSPLOG00000015028) #22	TNFRSF11A (ENSPLOG00000014735) #23	ZCCHC2 (ENSPLOG00000014480) #24	PHLPP1 (ENSPLOG00000013550) #25	BCL2 (ENSPLOG00000013394) #27	KDSR (ENSPLOG00000013321) #28	VPS4B (ENSPLOG00000013272) #29	SERPINB5 (ENSPLOG00000013165) #30	SERPINB12 (ENSPLOG00000013074) #32	SERPINB13 (ENSPLOG00000012969) #33	ENSPLOG00000011493 #34	SERPINB11 (ENSPLOG00000011120) #35	SERPINB7 (ENSPLOG00000010994) #36	SERPINB2 (ENSPLOG00000010924) #37	SERPINB10 (ENSPLOG00000010895)	SERPINB8 (ENSPLOG00000010827)
Cat	MODERN SPECIES	243	ALPK2 (ENSFCAG00000002283)	MALT1 (ENSFCAG00000013987)	ZNF532 (ENSFCAG00000013988)	OACYL (ENSFCAG00000024225)	ENSFCAG00000044914 #7	RAX (ENSFCAG00000006503) #8	LMAN1 (ENSFCAG00000030102) #10	CCBE1 (ENSFCAG00000041810) #11	PMAIP1 (ENSFCAG00000042068)	MC4R (ENSFCAG00000006540) #16	ENSFCAG00000027565	ENSFCAG00000033290	CDH20 (ENSFCAG00000003171) #17	RNF152 (ENSFCAG00000001944) #20	PIGN (ENSFCAG00000023477) #21	RELCH (ENSFCAG00000013841) #22	TNFRSF11A (ENSFCAG00000024132) #23	ZCCHC2 (ENSFCAG00000030054) #24	PHLPP1 (ENSFCAG00000042400) #25	BCL2 (ENSFCAG00000029552) #27	KDSR (ENSFCAG00000028024) #28	VPS4B (ENSFCAG00000031708) #29	SERPINB5 (ENSFCAG00000008379) #30	SERPINB12 (ENSFCAG00000034774) #32	SERPINB13 (ENSFCAG00000041318) #33	SERPINB11 (ENSFCAG00000024196) #35	ENSFCAG00000008380 #34	SERPINB7 (ENSFCAG00000022639) #36	SERPINB2 (ENSFCAG00000031659) #37	SERPINB10 (ENSFCAG00000008383)	SERPINB8 (ENSFCAG00000030347)
Caniformia	ANCESTRAL SPECIES	9	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT01080000258447	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C
Canidae	ANCESTRAL SPECIES	58	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00950000185399	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317.e #20	ENSGT01080000258447	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C
Canis_lupus	ANCESTRAL SPECIES		ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00950000185399	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317.e #20	ENSGT00390000007084.c.b.x.a.a	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C
Dog	MODERN SPECIES		SEC11C (ENSCAFG00845000586)	GRP (ENSCAFG00845000570) #7	RAX (ENSCAFG00845000544) #8	CPLX4 (ENSCAFG00845000529) #9	LMAN1 (ENSCAFG00845000443) #10	CCBE1 (ENSCAFG00845000419) #11	ENSCAFG00845000405	PMAIP1 (ENSCAFG00845000304)	ENSCAFG00845000292	MC4R (ENSCAFG00845000280) #16	ENSCAFG00845000263	CDH20 (ENSCAFG00845000129) #17	ENSCAFG00845000110	ENSCAFG00845000103	PIGN (ENSCAFG00845000068) #21	RELCH (ENSCAFG00845000036) #22	TNFRSF11A (ENSCAFG00845000032) #23	ZCCHC2 (ENSCAFG00845000016) #24	PHLPP1 (ENSCAFG00845000002) #25	BCL2 (ENSCAFG00845002725) #27	KDSR (ENSCAFG00845002496) #28	VPS4B (ENSCAFG00845002445) #29	SERPINB5 (ENSCAFG00845002320) #30	SERPINB12 (ENSCAFG00845002284) #32	SERPINB13 (ENSCAFG00845002264) #33	ENSCAFG00845002238 #34	SERPINB11 (ENSCAFG00845002203) #35	SERPINB7 (ENSCAFG00845002152) #36	SERPINB2 (ENSCAFG00845002126) #37	SERPINB10 (ENSCAFG00845002109)	SERPINB8 (ENSCAFG00845002084)
Dingo	MODERN SPECIES	125	RAX (ENSCAFG00020020090) #8	CPLX4 (ENSCAFG00020020089) #9	LMAN1 (ENSCAFG00020020082) #10	CCBE1 (ENSCAFG00020020073) #11	ENSCAFG00020020067	PMAIP1 (ENSCAFG00020020064)	ENSCAFG00020020045	MC4R (ENSCAFG00020020041) #16	ENSCAFG00020020031	CDH20 (ENSCAFG00020019976) #17	RNF152 (ENSCAFG00020019962) #20	ENSCAFG00020019958	ENSCAFG00020019953	ENSCAFG00020019951	PIGN (ENSCAFG00020019421) #21	RELCH (ENSCAFG00020017126) #22	TNFRSF11A (ENSCAFG00020017058) #23	ZCCHC2 (ENSCAFG00020017046) #24	PHLPP1 (ENSCAFG00020016854) #25	BCL2 (ENSCAFG00020016832) #27	KDSR (ENSCAFG00020016824) #28	VPS4B (ENSCAFG00020016780) #29	SERPINB5 (ENSCAFG00020016763) #30	SERPINB12 (ENSCAFG00020016758) #32	SERPINB13 (ENSCAFG00020016755) #33	ENSCAFG00020016053 #34	SERPINB11 (ENSCAFG00020015994) #35	ENSCAFG00020015990 #36	SERPINB2 (ENSCAFG00020015986) #37	SERPINB10 (ENSCAFG00020015978)	SERPINB8 (ENSCAFG00020015976)
Red fox	MODERN SPECIES	25	SEC11C (ENSVVUG00000015956)	ENSVVUG00000015959 #7	CPLX4 (ENSVVUG00000015964) #9	LMAN1 (ENSVVUG00000015966) #10	CCBE1 (ENSVVUG00000015972) #11	ENSVVUG00000015989	ENSVVUG00000015990	MC4R (ENSVVUG00000016008) #16	ENSVVUG00000016096	ENSVVUG00000017435	ENSVVUG00000017462	CDH20 (ENSVVUG00000017469) #17	RNF152 (ENSVVUG00000017495) #20	ENSVVUG00000017497	PIGN (ENSVVUG00000017523) #21	RELCH (ENSVVUG00000017586) #22	TNFRSF11A (ENSVVUG00000017610) #23	ZCCHC2 (ENSVVUG00000017624) #24	PHLPP1 (ENSVVUG00000017653) #25	BCL2 (ENSVVUG00000017738) #27	KDSR (ENSVVUG00000017746) #28	VPS4B (ENSVVUG00000017769) #29	SERPINB5 (ENSVVUG00000017771) #30	SERPINB12 (ENSVVUG00000017775) #32	SERPINB13 (ENSVVUG00000017788) #33	SERPINB11 (ENSVVUG00000018280) #35	ENSVVUG00000018296	SERPINB3 (ENSVVUG00000018305) #34	ENSVVUG00000018355 #36	SERPINB2 (ENSVVUG00000018358) #37	SERPINB10 (ENSVVUG00000018359)
Caniformia_b	ANCESTRAL SPECIES	25	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C
Mustelinae	ANCESTRAL SPECIES	5	ENSGT00940000160524	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C
Ferret	MODERN SPECIES	177	ZNF532 (ENSMPUG00000016477)	ENSMPUG00000016478	SEC11C (ENSMPUG00000016479)	GRP (ENSMPUG00000016480) #7	RAX (ENSMPUG00000016481) #8	CPLX4 (ENSMPUG00000016482) #9	LMAN1 (ENSMPUG00000016483) #10	CCBE1 (ENSMPUG00000016484) #11	ENSMPUG00000016487	MC4R (ENSMPUG00000019609) #16	ENSMPUG00000016493	ENSMPUG00000016495	CDH20 (ENSMPUG00000016496) #17	ENSMPUG00000016497	PIGN (ENSMPUG00000016498) #21	RELCH (ENSMPUG00000016501) #22	TNFRSF11A (ENSMPUG00000016507) #23	ZCCHC2 (ENSMPUG00000016510) #24	ENSMPUG00000016513 #25	ENSMPUG00000016515 #25	BCL2 (ENSMPUG00000016516) #27	KDSR (ENSMPUG00000016520) #28	ENSMPUG00000016524	VPS4B (ENSMPUG00000016525) #29	SERPINB5 (ENSMPUG00000016526) #30	SERPINB12 (ENSMPUG00000016527) #32	SERPINB13 (ENSMPUG00000016528) #33	ENSMPUG00000016529 #34	SERPINB11 (ENSMPUG00000016584) #35	SERPINB7 (ENSMPUG00000016587) #36	SERPINB2 (ENSMPUG00000016588) #37
American mink	MODERN SPECIES	5	MALT1 (ENSNVIG00000016308)	ZNF532 (ENSNVIG00000016267)	ENSNVIG00000016255	SEC11C (ENSNVIG00000016230)	GRP (ENSNVIG00000016216) #7	ENSNVIG00000016199	CPLX4 (ENSNVIG00000016189) #9	LMAN1 (ENSNVIG00000016169) #10	ENSNVIG00000016165	CCBE1 (ENSNVIG00000016139) #11	PMAIP1 (ENSNVIG00000016098)	MC4R (ENSNVIG00000016080) #16	ENSNVIG00000016070	CDH20 (ENSNVIG00000016015) #17	PIGN (ENSNVIG00000013980) #21	RELCH (ENSNVIG00000013898) #22	TNFRSF11A (ENSNVIG00000013795) #23	ZCCHC2 (ENSNVIG00000013719) #24	PHLPP1 (ENSNVIG00000013630) #25	BCL2 (ENSNVIG00000013614) #27	KDSR (ENSNVIG00000013519) #28	ENSNVIG00000013509 #29	SERPINB5 (ENSNVIG00000013499) #30	Q3SYB4 (ENSNVIG00000013476) #32	SERPINB13 (ENSNVIG00000013138) #33	ENSNVIG00000012508 #34	SERPINB11 (ENSNVIG00000012430) #35	SPB7 (ENSNVIG00000012396) #36	PAI2 (ENSNVIG00000012381) #37	SERPINB10 (ENSNVIG00000012349)	SERPINB8 (ENSNVIG00000012329)
Ursidae	ANCESTRAL SPECIES	23	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00860000135405	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT01040000240632	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	2196																ENSAMEG00000026517 #22
Giant Panda	MODERN SPECIES	5	SEC11C (ENSAMEG00000015255)	GRP (ENSAMEG00000015271) #7	ENSAMEG00000006625	CPLX4 (ENSAMEG00000006622) #9	LMAN1 (ENSAMEG00000006576) #10	CCBE1 (ENSAMEG00000006561) #11	ENSAMEG00000026478	ENSAMEG00000006560	PMAIP1 (ENSAMEG00000031106)	MC4R (ENSAMEG00000019205) #16	ENSAMEG00000031454	CDH20 (ENSAMEG00000006105) #17	ENSAMEG00000030518	RNF152 (ENSAMEG00000019059) #20	PIGN (ENSAMEG00000006195) #21	ENSAMEG00000006219 #22	TNFRSF11A (ENSAMEG00000006276) #23	ZCCHC2 (ENSAMEG00000006283) #24	PHLPP1 (ENSAMEG00000006315) #25	BCL2 (ENSAMEG00000006353) #27	KDSR (ENSAMEG00000006361) #28	ENSAMEG00000024746 #29	SERPINB5 (ENSAMEG00000006407) #30	SERPINB12 (ENSAMEG00000006423) #32	SERPINB13 (ENSAMEG00000006458) #33	ENSAMEG00000015210 #34	SERPINB11 (ENSAMEG00000015192) #35	SERPINB7 (ENSAMEG00000015174) #36	ENSAMEG00000028768	SERPINB2 (ENSAMEG00000015166) #37	SERPINB10 (ENSAMEG00000015156)
Ursus	ANCESTRAL SPECIES	147	ENSGT00390000018044.b.a	ENSGT00940000154437.jc	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT01040000240632	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C
Polar bear	MODERN SPECIES	110	ALPK2 (ENSUMAG00000005066)	MALT1 (ENSUMAG00000004980)	ZNF532 (ENSUMAG00000004976)	ENSUMAG00000004968	SEC11C (ENSUMAG00000004960)	ENSUMAG00000004957	CPLX4 (ENSUMAG00000004951) #9	LMAN1 (ENSUMAG00000004948) #10	CCBE1 (ENSUMAG00000004923) #11	ENSUMAG00000004914	MC4R (ENSUMAG00000004907) #16	ENSUMAG00000004868	CDH20 (ENSUMAG00000004845) #17	RNF152 (ENSUMAG00000004836) #20	PIGN (ENSUMAG00000004808) #21	RELCH (ENSUMAG00000003298) #22	ENSUMAG00000003171 #23	ZCCHC2 (ENSUMAG00000003109) #24	PHLPP1 (ENSUMAG00000002905) #25	BCL2 (ENSUMAG00000002874) #27	KDSR (ENSUMAG00000002840) #28	VPS4B (ENSUMAG00000002832) #29	SERPINB5 (ENSUMAG00000002828) #30	SERPINB12 (ENSUMAG00000002822) #32	ENSUMAG00000002816 #33	ENSUMAG00000002814 #33	ENSUMAG00000002336 #34	SERPINB11 (ENSUMAG00000002252) #35	ENSUMAG00000002241 #36	SERPINB2 (ENSUMAG00000002234) #37	SERPINB10 (ENSUMAG00000002222)
American black bear	DUPLICATION
American black bear	MODERN SPECIES	4526															PIGN (ENSUAMG00000005608) #21	ENSUAMG00000005607 #22
American black bear	MODERN SPECIES	1053																ENSUAMG00000016891 #22	ENSUAMG00000019760 #23	ENSUAMG00000019762 #23	ZCCHC2 (ENSUAMG00000019763) #24
Laurasiatheria_c	ANCESTRAL SPECIES	24	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161205.j	ENSGT00940000161637 #37	ENSGT00940000161205.i
Equus	ANCESTRAL SPECIES	36	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT01040000240632	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520.m.b #34	ENSGT00940000154520.n.b #34	ENSGT00940000154520.n.a #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161205.j
Donkey	MODERN SPECIES	27	ZNF532 (ENSEASG00005002708)	ENSEASG00005002705	SEC11C (ENSEASG00005002703)	GRP (ENSEASG00005037849) #7	RAX (ENSEASG00005038535) #8	CPLX4 (ENSEASG00005002694) #9	LMAN1 (ENSEASG00005002693) #10	CCBE1 (ENSEASG00005002692) #11	ENSEASG00005032814	ENSEASG00005033372	MC4R (ENSEASG00005002685) #16	ENSEASG00005002683	CDH20 (ENSEASG00005002680) #17	RNF152 (ENSEASG00005035867) #20	PIGN (ENSEASG00005002675) #21	RELCH (ENSEASG00005002668) #22	TNFRSF11A (ENSEASG00005002661) #23	ZCCHC2 (ENSEASG00005002645) #24	PHLPP1 (ENSEASG00005002275) #25	BCL2 (ENSEASG00005002229) #27	KDSR (ENSEASG00005002223) #28	VPS4B (ENSEASG00005002217) #29	SERPINB5 (ENSEASG00005002210) #30	SERPINB12 (ENSEASG00005002207) #32	SERPINB13 (ENSEASG00005002201) #33	ENSEASG00005001245 #34	ENSEASG00005002181 #34	ENSEASG00005036489 #34	ENSEASG00005001174 #34	ENSEASG00005001166 #34	SERPINB11 (ENSEASG00005001162) #35
Horse	MODERN SPECIES	29	ENSECAG00000045822	ALPK2 (ENSECAG00000012921)	MALT1 (ENSECAG00000013691)	ZNF532 (ENSECAG00000014565)	OACYL (ENSECAG00000016124)	SEC11C (ENSECAG00000017024)	GRP (ENSECAG00000019600) #7	RAX (ENSECAG00000030299)	LMAN1 (ENSECAG00000020570) #10	CCBE1 (ENSECAG00000008296) #11	MC4R (ENSECAG00000001712) #16	ENSECAG00000009017	CDH20 (ENSECAG00000015174) #17	RNF152 (ENSECAG00000048971) #20	PIGN (ENSECAG00000000728) #21	RELCH (ENSECAG00000007142) #22	TNFRSF11A (ENSECAG00000014672) #23	ZCCHC2 (ENSECAG00000014990) #24	PHLPP1 (ENSECAG00000016885) #25	ENSECAG00000056513	BCL2 (ENSECAG00000020437) #27	KDSR (ENSECAG00000020472) #28	VPS4B (ENSECAG00000022158) #29	SERPINB5 (ENSECAG00000023893) #30	SERPINB12 (ENSECAG00000000779) #32	SERPINB13 (ENSECAG00000029845) #33	ENSECAG00000048105 #34	ENSECAG00000035510 #34	ENSECAG00000044632 #34	SERPINB11 (ENSECAG00000024183) #35	SERPINB7 (ENSECAG00000024951) #36
Chiroptera	ANCESTRAL SPECIES	26	ENSGT00940000160524	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C
Microchiroptera	ANCESTRAL SPECIES	26	ENSGT00940000160524	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT00530000065105	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205.i	ENSGT00940000154835.C
Microbat	MODERN SPECIES	973	ATP8B1 (ENSMLUG00000004303)	NEDD4L (ENSMLUG00000004954)	ALPK2 (ENSMLUG00000004977)	MALT1 (ENSMLUG00000009423)	ZNF532 (ENSMLUG00000000137)	ENSMLUG00000027321	ENSMLUG00000005808	GRP (ENSMLUG00000005811) #7	CPLX4 (ENSMLUG00000005818) #9	LMAN1 (ENSMLUG00000005820) #10	ENSMLUG00000007063	MC4R (ENSMLUG00000000218) #16	CDH20 (ENSMLUG00000007460) #17	RNF152 (ENSMLUG00000000407) #20	PIGN (ENSMLUG00000016313) #21	RELCH (ENSMLUG00000016331) #22	TNFRSF11A (ENSMLUG00000016356) #23	ZCCHC2 (ENSMLUG00000009495) #24	PHLPP1 (ENSMLUG00000000103) #25	KDSR (ENSMLUG00000000120) #28	VPS4B (ENSMLUG00000011780) #29	SERPINB5 (ENSMLUG00000011802) #30	SERPINB12 (ENSMLUG00000011812) #32	SERPINB13 (ENSMLUG00000007206) #33	ENSMLUG00000017536 #34	SERPINB11 (ENSMLUG00000017539) #35	SERPINB7 (ENSMLUG00000017540) #36	ENSMLUG00000025688	ENSMLUG00000017541 #37	SERPINB10 (ENSMLUG00000015851)	SERPINB8 (ENSMLUG00000017544)
Greater horseshoe bat	MODERN SPECIES	10	MALT1 (ENSRFEG00010010969)	ZNF532 (ENSRFEG00010011551)	ENSRFEG00010011608	SEC11C (ENSRFEG00010011824)	GRP (ENSRFEG00010011906) #7	ENSRFEG00010011941	RAX (ENSRFEG00010011964) #8	CPLX4 (ENSRFEG00010012019) #9	LMAN1 (ENSRFEG00010012150) #10	CCBE1 (ENSRFEG00010012336) #11	ENSRFEG00010012463	MC4R (ENSRFEG00010012505) #16	CDH20 (ENSRFEG00010012524) #17	RNF152 (ENSRFEG00010012575) #20	PIGN (ENSRFEG00010012623) #21	RELCH (ENSRFEG00010013022) #22	TNFRSF11A (ENSRFEG00010013208) #23	ZCCHC2 (ENSRFEG00010013396) #24	PHLPP1 (ENSRFEG00010013788) #25	BCL2 (ENSRFEG00010016165) #27	KDSR (ENSRFEG00010016204) #28	VPS4B (ENSRFEG00010016326) #29	SERPINB5 (ENSRFEG00010016422) #30	SERPINB12 (ENSRFEG00010016495) #32	SERPINB13 (ENSRFEG00010016562) #33	ENSRFEG00010016667 #34	SERPINB11 (ENSRFEG00010016857) #35	SERPINB7 (ENSRFEG00010017039) #36	SERPINB2 (ENSRFEG00010017243) #37	SERPINB10 (ENSRFEG00010017293)	SERPINB8 (ENSRFEG00010017345)
Megabat	MODERN SPECIES	3092															PIGN (ENSPVAG00000013008) #21	RELCH (ENSPVAG00000013012) #22	TNFRSF11A (ENSPVAG00000013015) #23	ZCCHC2 (ENSPVAG00000013017) #24
Atlantogenata	ANCESTRAL SPECIES	22	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT01040000240632	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154519.i.a
Xenarthra	ANCESTRAL SPECIES	1369																ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24
Armadillo	MODERN SPECIES	2398																RELCH (ENSDNOG00000039565) #22	TNFRSF11A (ENSDNOG00000040836) #23	ZCCHC2 (ENSDNOG00000015952) #24
Sloth	MODERN SPECIES	2699																RELCH (ENSCHOG00000006196) #22
Afrotheria	ANCESTRAL SPECIES	23	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT01040000240632	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154519.i.a.b
Afrotheria_a	ANCESTRAL SPECIES	22	ENSGT00390000018044.b.a	ENSGT00940000154437	ENSGT00530000063340	ENSGT00390000015600.c.b	ENSGT00940000154470.a #7	ENSGT00940000162144 #8	ENSGT00950000182938.b.b.b.b.b.b #9	ENSGT00940000159146 #10	ENSGT00390000014907.B #11	ENSGT01040000240632	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00940000162214 #33	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154519.i.a.b
Elephant	MODERN SPECIES	375	ZNF532 (ENSLAFG00000001170)	ENSLAFG00000029865	SEC11C (ENSLAFG00000008344)	GRP (ENSLAFG00000008342) #7	RAX (ENSLAFG00000017930) #8	CPLX4 (ENSLAFG00000017935) #9	LMAN1 (ENSLAFG00000023125) #10	CCBE1 (ENSLAFG00000011117) #11	ENSLAFG00000007820	ENSLAFG00000028533	MC4R (ENSLAFG00000021525) #16	ENSLAFG00000027361	CDH20 (ENSLAFG00000014493) #17	RNF152 (ENSLAFG00000007283) #20	PIGN (ENSLAFG00000002839) #21	RELCH (ENSLAFG00000002841) #22	TNFRSF11A (ENSLAFG00000003932) #23	ZCCHC2 (ENSLAFG00000021566) #24	PHLPP1 (ENSLAFG00000010242) #25	BCL2 (ENSLAFG00000000574) #27	KDSR (ENSLAFG00000000575) #28	VPS4B (ENSLAFG00000014234) #29	SERPINB5 (ENSLAFG00000011459) #30	SERPINB12 (ENSLAFG00000000544) #32	SERPINB13 (ENSLAFG00000000545) #33	ENSLAFG00000026018 #34	SERPINB11 (ENSLAFG00000027339) #35	SERPINB7 (ENSLAFG00000018627) #36	SERPINB2 (ENSLAFG00000008537) #37	SERPINB10 (ENSLAFG00000008540)	ENSLAFG00000022985
Hyrax	MODERN SPECIES	2450																RELCH (ENSPCAG00000009240) #22
Tenrec	MODERN SPECIES	2997																RELCH (ENSETEG00000016144) #22	ENSETEG00000016148 #23
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00390000000950.c.a.h	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C.v
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00390000000950.c.a.h	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C.v
Diprotodontia	ANCESTRAL SPECIES	1	ENSGT00390000018047	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00390000000950.c.a.h	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C.v
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT00940000155469	ENSGT00730000111450.b	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00390000009405.e.a.b	ENSGT01020000230695	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161829 #32	ENSGT00390000000950.c.a.h	ENSGT00940000154520 #34	ENSGT00940000161560 #35	ENSGT00940000161520 #36	ENSGT00940000161637 #37	ENSGT00940000161205	ENSGT00940000154835.C.v
koala	MODERN SPECIES	60							ENSPCIG00000033380	ENSPCIG00000015566	CDH6 (ENSPCIG00000024712)	DROSHA (ENSPCIG00000006010)	C5orf22 (ENSPCIG00000006016)	MC4R (ENSPCIG00000006019) #16	CDH20 (ENSPCIG00000012115) #17	RNF152 (ENSPCIG00000012114) #20	PIGN (ENSPCIG00000012110) #21	RELCH (ENSPCIG00000012105) #22	TNFRSF11A (ENSPCIG00000011462) #23	ZCCHC2 (ENSPCIG00000011461) #24	PHLPP1 (ENSPCIG00000011452) #25	ENSPCIG00000011460	ENSPCIG00000011447	KDSR (ENSPCIG00000011435) #28	VPS4B (ENSPCIG00000011432) #29	SERPINB5 (ENSPCIG00000011427) #30	ENSPCIG00000001074 #32	ENSPCIG00000001014	ENSPCIG00000000996 #34	SERPINB11 (ENSPCIG00000000963) #35	SERPINB7 (ENSPCIG00000000871) #36	SERPINB2 (ENSPCIG00000000847) #37	SERPINB10 (ENSPCIG00000000835)
Common wonbat	MODERN SPECIES	1028	ENSVURG00010020939	CDH9 (ENSVURG00010020927)	ENSVURG00010020923	ENSVURG00010020918	ENSVURG00010020913	ENSVURG00010020907	CDH6 (ENSVURG00010020902)	ENSVURG00010020899	DROSHA (ENSVURG00010020881)	C5orf22 (ENSVURG00010020872)	MC4R (ENSVURG00010020866) #16	ENSVURG00010020859	CDH20 (ENSVURG00010020851) #17	RNF152 (ENSVURG00010020845) #20	PIGN (ENSVURG00010020839) #21	RELCH (ENSVURG00010015532) #22	TNFRSF11A (ENSVURG00010015241) #23	ZCCHC2 (ENSVURG00010015172) #24	PHLPP1 (ENSVURG00010013105) #25	BCL2 (ENSVURG00010013011) #27	KDSR (ENSVURG00010012985) #28	VPS4B (ENSVURG00010012962) #29	SERPINB5 (ENSVURG00010012951) #30	SERPINB12 (ENSVURG00010012934) #32	ENSVURG00010012928	ENSVURG00010012921 #34	SERPINB11 (ENSVURG00010012915) #35	ENSVURG00010012905	SERPINB7 (ENSVURG00010012897) #36	SERPINB2 (ENSVURG00010012888) #37	SERPINB10 (ENSVURG00010012880)
Wallaby	MODERN SPECIES	4006																RELCH (ENSMEUG00000016683) #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000032124	CDH12 (ENSSHAG00000009110)	ENSSHAG00000029966	CDH10 (ENSSHAG00000007764)	ENSSHAG00000021295	ENSSHAG00000031784	CDH9 (ENSSHAG00000004715)	ENSSHAG00000023856	CDH6 (ENSSHAG00000014478)	DROSHA (ENSSHAG00000015198)	ENSSHAG00000015544	ENSSHAG00000005781 #16	ENSSHAG00000010713 #17	RNF152 (ENSSHAG00000030019) #20	PIGN (ENSSHAG00000014300) #21	RELCH (ENSSHAG00000014954) #22	ENSSHAG00000031371 #23	ZCCHC2 (ENSSHAG00000016133) #24	PHLPP1 (ENSSHAG00000025001) #25	BCL2 (ENSSHAG00000024326) #27	KDSR (ENSSHAG00000028590) #28	VPS4B (ENSSHAG00000017852) #29	SERPINB5 (ENSSHAG00000031504) #30	ENSSHAG00000018086 #32	ENSSHAG00000022285	ENSSHAG00000018248 #34	ENSSHAG00000023286 #35	SERPINB7 (ENSSHAG00000018306) #36	SERPINB2 (ENSSHAG00000018425) #37	ENSSHAG00000029223	ENSSHAG00000018493
Opossum	MODERN SPECIES	2	ENSMODG00000046253	CDH9 (ENSMODG00000004237)	ENSMODG00000038437	ENSMODG00000051366	ENSMODG00000048001	ENSMODG00000004683	CDH6 (ENSMODG00000004732)	DROSHA (ENSMODG00000004807)	C5orf22 (ENSMODG00000004823)	MC4R (ENSMODG00000025063) #16	ENSMODG00000004841	ENSMODG00000004847	CDH20 (ENSMODG00000004905) #17	RNF152 (ENSMODG00000025062) #20	PIGN (ENSMODG00000004956) #21	RELCH (ENSMODG00000005059) #22	TNFRSF11A (ENSMODG00000005072) #23	ZCCHC2 (ENSMODG00000005101) #24	PHLPP1 (ENSMODG00000005218) #25	ENSMODG00000048105	BCL2 (ENSMODG00000005242) #27	KDSR (ENSMODG00000005258) #28	VPS4B (ENSMODG00000005285) #29	SERPINB5 (ENSMODG00000005296) #30	SERPINB12 (ENSMODG00000005312) #32	ENSMODG00000005318	ENSMODG00000005323 #34	ENSMODG00000005407 #34	SERPINB11 (ENSMODG00000005438) #35	SERPINB7 (ENSMODG00000005451) #36	SERPINB2 (ENSMODG00000005456) #37
Platypus	MODERN SPECIES	86	ENSOANG00000046098	SEC61B (ENSOANG00000050916)	NR4A3 (ENSOANG00000050764)	STX17 (ENSOANG00000046857)	ERP44 (ENSOANG00000002120)	INVS (ENSOANG00000002119)	TEX10 (ENSOANG00000002117)	ENSOANG00000022432	MSANTD3 (ENSOANG00000002115)	SERPINB8 (ENSOANG00000002112)	SERPINB1 (ENSOANG00000002109)	MC4R (ENSOANG00000002108) #16	ENSOANG00000002106	CDH20 (ENSOANG00000003639) #17	PIGN (ENSOANG00000002105) #21	RELCH (ENSOANG00000015613) #22	ENSOANG00000008029 #23	ZCCHC2 (ENSOANG00000045362) #24	PHLPP1 (ENSOANG00000009535) #25	ENSOANG00000011418 #29	ENSOANG00000036446 #27	SERPINB5 (ENSOANG00000007167) #30	SERPINB12 (ENSOANG00000037948) #32	ENSOANG00000045217 #34	ENSOANG00000038121 #35	SERPINB7 (ENSOANG00000043662) #36
Sauria	ANCESTRAL SPECIES		ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154673.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.a #34	ENSGT00940000154520.b #34	ENSGT00940000161205	ENSGT00940000165915	ENSGT00940000154835.C	ENSGT00940000154573
Lepidosauria	ANCESTRAL SPECIES	2	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154673.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.b #34	ENSGT00940000161205	ENSGT00940000165915	ENSGT00940000154835.C	ENSGT00940000154573	ENSGT00390000008538
Episquamata	ANCESTRAL SPECIES	1	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154673.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154835.C.e.a.a	ENSGT00940000154520.b #34	ENSGT00940000161205	ENSGT00940000165915	ENSGT00940000154835.C.f	ENSGT00940000154573
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154673.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35
Elapidae	ANCESTRAL SPECIES	8	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154673.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052.e	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600.s.a.a #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.b.d #34	ENSGT00940000161205	ENSGT00940000154520.b.c #34	ENSGT00940000154835.C.f.c.b.a	ENSGT00940000154835.C.f.c.b.b	ENSGT00940000154573.f
Indian cobra	MODERN SPECIES	2	CDH18 (ENSNNAG00000007160)	ENSNNAG00000007199	ENSNNAG00000007235	ENSNNAG00000007241	CDH10 (ENSNNAG00000007256)	CDH9 (ENSNNAG00000007322)	CDH6 (ENSNNAG00000007358)	DROSHA (ENSNNAG00000007626)	ENSNNAG00000010953	MC4R (ENSNNAG00000010965) #16	ENSNNAG00000010981	CDH20 (ENSNNAG00000011070) #17	RNF152 (ENSNNAG00000011116) #20	ENSNNAG00000011135 #21	ENSNNAG00000011215 #21	RELCH (ENSNNAG00000011550) #22	TNFRSF11A (ENSNNAG00000015561) #23	ZCCHC2 (ENSNNAG00000015601) #24	PHLPP1 (ENSNNAG00000015670) #25	KDSR (ENSNNAG00000015949) #28	VPS4B (ENSNNAG00000016008) #29	SERPINB5 (ENSNNAG00000016038) #30	SERPINB11 (ENSNNAG00000016062) #35	ENSNNAG00000016117	ENSNNAG00000016123 #34	SERPINB10 (ENSNNAG00000016136)	ENSNNAG00000016150 #34	ENSNNAG00000016179	ENSNNAG00000016209	SERPINB1 (ENSNNAG00000016284)	WRNIP1 (ENSNNAG00000016296)
Elapidae_a	ANCESTRAL SPECIES	35	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154673.b	ENSGT00940000154187.a.a.e	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052.f	ENSGT00730000111052.e	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167.a.a #17	ENSGT00730000111317 #20	ENSGT00390000017600.s.a.a #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.b.d #34
Acanthophiinae	ANCESTRAL SPECIES	35	ENSGT00940000155469	ENSGT00730000111450	ENSGT00990000212917	ENSGT00940000157512	ENSGT00940000154673.b	ENSGT00940000154187.a.a.e	ENSGT00940000160496.b.f	ENSGT00940000154673.a	ENSGT00730000111052.e	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167.a.a #17	ENSGT00730000111317 #20	ENSGT00390000017600.s.a.a #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.b.d #34
Eastern brown snake	MODERN SPECIES	15	ENSPTXG00000018097	ENSPTXG00000018098	CDH18 (ENSPTXG00000018100)	ENSPTXG00000018102	CDH10 (ENSPTXG00000018105)	ENSPTXG00000018107	ENSPTXG00000018108	CDH6 (ENSPTXG00000018111)	DROSHA (ENSPTXG00000018118)	C5orf22 (ENSPTXG00000018349)	MC4R (ENSPTXG00000018350) #16	ENSPTXG00000018351	CDH20 (ENSPTXG00000018352) #17	RNF152 (ENSPTXG00000018353) #20	PIGN (ENSPTXG00000018354) #21	RELCH (ENSPTXG00000018355) #22	TNFRSF11A (ENSPTXG00000018356) #23	ZCCHC2 (ENSPTXG00000018357) #24	PHLPP1 (ENSPTXG00000018359) #25	ENSPTXG00000018361	BCL2 (ENSPTXG00000018363) #27	KDSR (ENSPTXG00000018364) #28	VPS4B (ENSPTXG00000018366) #29	SERPINB5 (ENSPTXG00000018368) #30	SERPINB11 (ENSPTXG00000018370) #35	ENSPTXG00000018378 #34
Mainland tiger snake	MODERN SPECIES	72			CDH9 (ENSNSUG00000018894)	ENSNSUG00000018893	ENSNSUG00000018892	CDH6 (ENSNSUG00000018891)	DROSHA (ENSNSUG00000018890)	ENSNSUG00000018889	C5orf22 (ENSNSUG00000018877)	MC4R (ENSNSUG00000018876) #16	ENSNSUG00000018875	CDH20 (ENSNSUG00000018874) #17	RNF152 (ENSNSUG00000018873) #20	ENSNSUG00000018843 #21	ENSNSUG00000018833 #21	RELCH (ENSNSUG00000018832) #22	TNFRSF11A (ENSNSUG00000018831) #23	ZCCHC2 (ENSNSUG00000018830) #24	PHLPP1 (ENSNSUG00000018808) #25	ENSNSUG00000018807	BCL2 (ENSNSUG00000018806) #27	KDSR (ENSNSUG00000018805) #28	VPS4B (ENSNSUG00000018804) #29	SERPINB5 (ENSNSUG00000018801) #30	SERPINB11 (ENSNSUG00000018797) #35
Blue-lipped sea krait	MODERN SPECIES	6348																RELCH (ENSLLTG00000016489) #22
Lizard	MODERN SPECIES	879											ENSACAG00000008555	ENSACAG00000037172	CDH20 (ENSACAG00000011301) #17	RNF152 (ENSACAG00000011557) #20	PIGN (ENSACAG00000011559) #21	RELCH (ENSACAG00000011615) #22	TNFRSF11A (ENSACAG00000011780) #23	ZCCHC2 (ENSACAG00000011813) #24	ENSACAG00000041358	PHLPP1 (ENSACAG00000011864) #25	ENSACAG00000012011
Laterata	ANCESTRAL SPECIES	5	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154673.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154835.C.e.a.a	ENSGT00940000154520.b #34	ENSGT00940000161205	ENSGT00940000165915	ENSGT00940000154835.C.f	ENSGT00940000154573
Common wall lizard	MODERN SPECIES	15	CDH10 (ENSPMRG00000005531)	ENSPMRG00000005524	ENSPMRG00000005521	ENSPMRG00000005519	ENSPMRG00000005516	CDH9 (ENSPMRG00000005511)	ENSPMRG00000005508	CDH6 (ENSPMRG00000005501)	DROSHA (ENSPMRG00000005181)	C5orf22 (ENSPMRG00000005142)	MC4R (ENSPMRG00000005138) #16	ENSPMRG00000006217	CDH20 (ENSPMRG00000006163) #17	RNF152 (ENSPMRG00000006158) #20	PIGN (ENSPMRG00000006139) #21	RELCH (ENSPMRG00000006102) #22	TNFRSF11A (ENSPMRG00000006077) #23	ZCCHC2 (ENSPMRG00000006057) #24	ENSPMRG00000006043	PHLPP1 (ENSPMRG00000006022) #25	ENSPMRG00000006007	BCL2 (ENSPMRG00000006001) #27	VPS4B (ENSPMRG00000005944) #29	SERPINB5 (ENSPMRG00000005917) #30	SERPINB11 (ENSPMRG00000005906) #35	ENSPMRG00000005899	ENSPMRG00000005891	ENSPMRG00000005846	ENSPMRG00000005815 #34	SERPINB10 (ENSPMRG00000005798)	ENSPMRG00000005785
Argentine black and white tegu	MODERN SPECIES	4	ENSSMRG00000009388	CDH10 (ENSSMRG00000009311)	ENSSMRG00000009261	CDH9 (ENSSMRG00000009260)	ENSSMRG00000009215	ENSSMRG00000009176	CDH6 (ENSSMRG00000009145)	DROSHA (ENSSMRG00000009087)	C5orf22 (ENSSMRG00000009085)	ENSSMRG00000009050	MC4R (ENSSMRG00000008977) #16	ENSSMRG00000008933	CDH20 (ENSSMRG00000008914) #17	RNF152 (ENSSMRG00000008881) #20	PIGN (ENSSMRG00000008879) #21	RELCH (ENSSMRG00000008834) #22	TNFRSF11A (ENSSMRG00000008829) #23	ZCCHC2 (ENSSMRG00000008826) #24	PHLPP1 (ENSSMRG00000008781) #25	ENSSMRG00000008778	BCL2 (ENSSMRG00000008760) #27	KDSR (ENSSMRG00000008713) #28	VPS4B (ENSSMRG00000008709) #29	SERPINB5 (ENSSMRG00000008708) #30	ENSSMRG00000008707	SERPINB11 (ENSSMRG00000008705) #35	ENSSMRG00000008677	ENSSMRG00000008669	ENSSMRG00000008668	ENSSMRG00000008667 #34	ENSSMRG00000008573 #34
tuatara	MODERN SPECIES	1935													RNF152 (ENSSPUG00000006686) #20	ENSSPUG00000006727 #21	ENSSPUG00000006851 #21	RELCH (ENSSPUG00000006903) #22	ENSSPUG00000006968 #23	ENSSPUG00000006975 #23	ENSSPUG00000006982 #23	ZCCHC2 (ENSSPUG00000006991) #24	PHLPP1 (ENSSPUG00000007146) #25	ENSSPUG00000007789	BCL2 (ENSSPUG00000007802) #27	KDSR (ENSSPUG00000007806) #28	VPS4B (ENSSPUG00000007814) #29
Archelosauria	ANCESTRAL SPECIES	5	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.b #34	ENSGT00940000154520.a #34	ENSGT00940000161205	ENSGT00940000165915	ENSGT00940000154835.C	ENSGT00940000154573
Archosauria	ANCESTRAL SPECIES		ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.b #34	ENSGT00940000154520.a #34	ENSGT00940000161205	ENSGT00940000165915	ENSGT00940000154835.C	ENSGT00940000154573
Aves	ANCESTRAL SPECIES	24	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.b #34	ENSGT00940000154520.a.a #34	ENSGT00940000154520.a.b #34	ENSGT00940000161205	ENSGT00940000165915.b	ENSGT00940000165915.a
Neognathae	ANCESTRAL SPECIES		ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.b #34	ENSGT00940000154520.a.a.a #34	ENSGT00940000154520.a.a.b #34	ENSGT00940000154520.a.b #34	ENSGT00940000161205	ENSGT00940000165915.b
Neognathae_b	ANCESTRAL SPECIES	3	ENSGT00390000018047	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.b #34	ENSGT00940000154520.a.a.a #34	ENSGT00940000154520.a.a.b #34	ENSGT00940000154520.a.b #34	ENSGT00940000161205	ENSGT00940000165915.b
Neognathae_c	ANCESTRAL SPECIES	1	ENSGT00390000018047	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.b #34	ENSGT00940000154520.a.a.a #34	ENSGT00940000154520.a.a.b #34	ENSGT00940000154520.a.b #34	ENSGT00940000161205	ENSGT00940000165915.b
Kakapo	MODERN SPECIES		MYO10 (ENSSHBG00005014633)	BASP1 (ENSSHBG00005014787)	CDH18 (ENSSHBG00005014801)	CDH12 (ENSSHBG00005014815)	CDH10 (ENSSHBG00005014826)	ENSSHBG00005014843	CDH9 (ENSSHBG00005014849)	CDH6 (ENSSHBG00005014868)	ENSSHBG00005014876	DROSHA (ENSSHBG00005000539)	C5orf22 (ENSSHBG00005000583)	MC4R (ENSSHBG00005007263) #16	CDH20 (ENSSHBG00005007270) #17	RNF152 (ENSSHBG00005007280) #20	PIGN (ENSSHBG00005007437) #21	RELCH (ENSSHBG00005008749) #22	PXDC1 (ENSSHBG00005008829)	PRPF4B (ENSSHBG00005008837)	ECI2 (ENSSHBG00005008854)	ENSSHBG00005008868	RPP40 (ENSSHBG00005008879)	PPP1R3G (ENSSHBG00005008885)	ENSSHBG00005008896	FARS2 (ENSSHBG00005008903)	NRN1 (ENSSHBG00005008908)	F13A1 (ENSSHBG00005008917)	LY86 (ENSSHBG00005008929)	RREB1 (ENSSHBG00005008941)	SSR1 (ENSSHBG00005008950)	RIOK1 (ENSSHBG00005008961)	ENSSHBG00005008969
Golden eagle	MODERN SPECIES	9	BASP1 (ENSACCG00020014643)	CDH18 (ENSACCG00020014660)	ENSACCG00020014679	ENSACCG00020014702	CDH10 (ENSACCG00020014718)	CDH9 (ENSACCG00020014741)	ENSACCG00020014771	CDH6 (ENSACCG00020014800)	DROSHA (ENSACCG00020014847)	C5orf22 (ENSACCG00020014892)	MC4R (ENSACCG00020014915) #16	CDH20 (ENSACCG00020014937) #17	ENSACCG00020014969	RNF152 (ENSACCG00020014987) #20	PIGN (ENSACCG00020015013) #21	RELCH (ENSACCG00020015427) #22	TNFRSF11A (ENSACCG00020015821) #23	ZCCHC2 (ENSACCG00020015866) #24	PHLPP1 (ENSACCG00020015931) #25	ENSACCG00020015973	BCL2 (ENSACCG00020015981) #27	KDSR (ENSACCG00020015992) #28	VPS4B (ENSACCG00020016009) #29	SERPINB5 (ENSACCG00020016021) #30	SERPINB11 (ENSACCG00020016030) #35	ENSACCG00020016053 #34	ENSACCG00020016076 #34	ENSACCG00020016092 #34	ENSACCG00020016115 #34	SERPINB10 (ENSACCG00020016146)	ENSACCG00020016163
Passeriformes	ANCESTRAL SPECIES		ENSGT00390000018047	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.b #34	ENSGT00940000154520.a.a.a #34	ENSGT00940000154520.a.a.b #34	ENSGT00940000154520.a.b #34	ENSGT00940000161205	ENSGT00940000165915.b
Passeriformes_d	ANCESTRAL SPECIES		ENSGT00390000018047	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.b #34	ENSGT00940000154520.a.a.a #34	ENSGT00940000154520.a.a.b #34	ENSGT00940000154520.a.b #34	ENSGT00940000161205	ENSGT00940000165915.b
Flycatcher	MODERN SPECIES	11	ZNF622 (ENSFALG00000007501)	RETREG1 (ENSFALG00000028884)	MYO10 (ENSFALG00000007507)	BASP1 (ENSFALG00000014299)	CDH18 (ENSFALG00000007516)	CDH12 (ENSFALG00000007539)	CDH10 (ENSFALG00000007598)	CDH9 (ENSFALG00000012759)	CDH6 (ENSFALG00000012791)	DROSHA (ENSFALG00000012843)	C5orf22 (ENSFALG00000012879)	ENSFALG00000014730 #16	CDH20 (ENSFALG00000012917) #17	RNF152 (ENSFALG00000014751) #20	PIGN (ENSFALG00000012955) #21	RELCH (ENSFALG00000012961) #22	TNFRSF11A (ENSFALG00000027103) #23	ZCCHC2 (ENSFALG00000012977) #24	PHLPP1 (ENSFALG00000012989) #25	ENSFALG00000023146	BCL2 (ENSFALG00000024234) #27	KDSR (ENSFALG00000024868) #28	VPS4B (ENSFALG00000013005) #29	SERPINB5 (ENSFALG00000013011) #30	SERPINB11 (ENSFALG00000013014) #35	ENSFALG00000013018 #34	ENSFALG00000013025 #34	SERPINB10 (ENSFALG00000013037)	ENSFALG00000013041	ENSFALG00000013044	ENSFALG00000024634
Passeriformes_g	ANCESTRAL SPECIES	3	ENSGT00390000018047	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.b #34	ENSGT00940000154520.a.a.a #34	ENSGT00940000154520.a.a.b #34	ENSGT00940000154520.a.b #34	ENSGT00940000161205	ENSGT00940000165915.b
Medium ground finch	MODERN SPECIES	62							CDH10 (ENSGFOG00000014189)	CDH9 (ENSGFOG00000014187)	CDH6 (ENSGFOG00000014185)	DROSHA (ENSGFOG00000014179)	C5orf22 (ENSGFOG00000014175)	MC4R (ENSGFOG00000014172) #16	CDH20 (ENSGFOG00000014169) #17	RNF152 (ENSGFOG00000014167) #20	PIGN (ENSGFOG00000014163) #21	RELCH (ENSGFOG00000014123) #22	TNFRSF11A (ENSGFOG00000014121) #23	ZCCHC2 (ENSGFOG00000014120) #24	PHLPP1 (ENSGFOG00000014118) #25	ENSGFOG00000014117
Passeroidea	ANCESTRAL SPECIES	2	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00960000191202	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.b #34	ENSGT00940000154520.a.a.a #34	ENSGT00940000154520.a.a.b #34	ENSGT00940000154520.a.b #34	ENSGT00940000161205	ENSGT00940000165915.b
Zebra finch	MODERN SPECIES	12	LRRFIP2 (ENSTGUG00000001878)	GOLGA4 (ENSTGUG00000001889)	ITGA9 (ENSTGUG00000001897)	NEUROD6 (ENSTGUG00000001910)	CDH12 (ENSTGUG00000001914)	CDH10 (ENSTGUG00000001926)	CDH9 (ENSTGUG00000001934)	CDH6 (ENSTGUG00000001940)	DROSHA (ENSTGUG00000001955)	C5orf22 (ENSTGUG00000001970)	MC4R (ENSTGUG00000027462) #16	ENSTGUG00000024048	CDH20 (ENSTGUG00000001975) #17	RNF152 (ENSTGUG00000025119) #20	PIGN (ENSTGUG00000001988) #21	RELCH (ENSTGUG00000001999) #22	TNFRSF11A (ENSTGUG00000024912) #23	ZCCHC2 (ENSTGUG00000024466) #24	PHLPP1 (ENSTGUG00000002028) #25	ENSTGUG00000019571	ENSTGUG00000002033	KDSR (ENSTGUG00000002036) #28	VPS4B (ENSTGUG00000002043) #29	SERPINB5 (ENSTGUG00000002060) #30	SERPINB11 (ENSTGUG00000029378) #35	ENSTGUG00000018988	ENSTGUG00000002067 #34	ENSTGUG00000025890 #34	ENSTGUG00000002078 #34	ENSTGUG00000028052 #34	ENSTGUG00000002079
Common canary	MODERN SPECIES		ENSSCAG00000002293	ENSSCAG00000002371	SERPINB10 (ENSSCAG00000002377)	ENSSCAG00000002385 #34	ENSSCAG00000002416 #34	ENSSCAG00000002481 #34	ENSSCAG00000002489 #34	SERPINB11 (ENSSCAG00000002494) #35	SERPINB5 (ENSSCAG00000002519) #30	VPS4B (ENSSCAG00000002524) #29	KDSR (ENSSCAG00000002528) #28	BCL2 (ENSSCAG00000002536) #27	CDH20 (ENSSCAG00000002571) #17	RNF152 (ENSSCAG00000002574) #20	PIGN (ENSSCAG00000002586) #21	RELCH (ENSSCAG00000002685) #22	TNFRSF11A (ENSSCAG00000003608) #23	ZCCHC2 (ENSSCAG00000003624) #24	PHLPP1 (ENSSCAG00000003673) #25	ENSSCAG00000003694	ENSSCAG00000003701	MC4R (ENSSCAG00000003721) #16	C5orf22 (ENSSCAG00000003726)	DROSHA (ENSSCAG00000003730)	CDH6 (ENSSCAG00000003748)	CDH9 (ENSSCAG00000003904)	CDH10 (ENSSCAG00000004024)	ENSSCAG00000004047	CDH12 (ENSSCAG00000004098)	CDH18 (ENSSCAG00000004161)	BASP1 (ENSSCAG00000004194)
Great tit	MODERN SPECIES	11	ENSPMJG00000002985	GRB10 (ENSPMJG00000002920)	DDC (ENSPMJG00000002903)	FIGNL1 (ENSPMJG00000002898)	IKZF1 (ENSPMJG00000002694)	VWC2 (ENSPMJG00000002682)	CDH12 (ENSPMJG00000002485)	CDH10 (ENSPMJG00000002282)	CDH9 (ENSPMJG00000002238)	CDH6 (ENSPMJG00000002167)	DROSHA (ENSPMJG00000002072)	C5orf22 (ENSPMJG00000001886)	CDH20 (ENSPMJG00000001804) #17	RNF152 (ENSPMJG00000001735) #20	PIGN (ENSPMJG00000001692) #21	RELCH (ENSPMJG00000001666) #22	TNFRSF11A (ENSPMJG00000001649) #23	ZCCHC2 (ENSPMJG00000001632) #24	PHLPP1 (ENSPMJG00000001592) #25	ENSPMJG00000001588	BCL2 (ENSPMJG00000001587) #27	KDSR (ENSPMJG00000001482) #28	VPS4B (ENSPMJG00000001445) #29	SERPINB5 (ENSPMJG00000001417) #30	SERPINB11 (ENSPMJG00000001400) #35	ENSPMJG00000001360 #34	ENSPMJG00000000329 #34	ENSPMJG00000000301 #34	ENSPMJG00000000265 #34	SERPINB10 (ENSPMJG00000000250)	ENSPMJG00000000246
Galloanserae	ANCESTRAL SPECIES		ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.b #34	ENSGT00940000154520.a.a.a #34	ENSGT00940000154520.a.a.b #34	ENSGT00940000154520.a.b #34	ENSGT00940000161205	ENSGT00940000165915.b
Anatidae	ANCESTRAL SPECIES	3						ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.b #34	ENSGT00940000154520.a.a.a #34	ENSGT00940000154520.a.a.b #34	ENSGT00940000154520.a.b #34	ENSGT00940000161205	ENSGT00940000165915.b
Pink-footed goose	MODERN SPECIES	55								CDH6 (ENSABRG00000012326)	DROSHA (ENSABRG00000012316)	C5orf22 (ENSABRG00000012303)	MC4R (ENSABRG00000012292) #16	ENSABRG00000012282	CDH20 (ENSABRG00000012246) #17	RNF152 (ENSABRG00000012241) #20	PIGN (ENSABRG00000012224) #21	RELCH (ENSABRG00000012164) #22	TNFRSF11A (ENSABRG00000012149) #23	ZCCHC2 (ENSABRG00000012136) #24	PHLPP1 (ENSABRG00000012116) #25	ENSABRG00000012109	BCL2 (ENSABRG00000012104) #27	KDSR (ENSABRG00000012094) #28	VPS4B (ENSABRG00000012085) #29	SERPINB5 (ENSABRG00000012078) #30	SERPINB11 (ENSABRG00000012070) #35	ENSABRG00000012034 #34	ENSABRG00000012025 #34	ENSABRG00000012019 #34	ENSABRG00000012008 #34	SERPINB10 (ENSABRG00000011997)	ENSABRG00000011985
Duck	MODERN SPECIES	10	ENSAPLG00000001572	CDH10 (ENSAPLG00000007403)	ENSAPLG00000023454	CDH9 (ENSAPLG00000005927)	ENSAPLG00000018519	ENSAPLG00000017576	CDH6 (ENSAPLG00000005708)	DROSHA (ENSAPLG00000004372)	C5orf22 (ENSAPLG00000004273)	MC4R (ENSAPLG00000001496) #16	ENSAPLG00000029186	CDH20 (ENSAPLG00000011358) #17	RNF152 (ENSAPLG00000012020) #20	ENSAPLG00000002092 #21	ENSAPLG00000004388 #21	RELCH (ENSAPLG00000003919) #22	TNFRSF11A (ENSAPLG00000026395) #23	ZCCHC2 (ENSAPLG00000003573) #24	PHLPP1 (ENSAPLG00000003386) #25	ENSAPLG00000019497	BCL2 (ENSAPLG00000021075) #27	KDSR (ENSAPLG00000006943) #28	VPS4B (ENSAPLG00000006557) #29	SERPINB5 (ENSAPLG00000022949) #30	SERPINB11 (ENSAPLG00000027357) #35	ENSAPLG00000008560 #34	ENSAPLG00000027763 #34	ENSAPLG00000008266 #34	ENSAPLG00000014337	ENSAPLG00000024985	CDH18 (ENSAPLG00000005731)
Phasianidae	ANCESTRAL SPECIES	1	ENSGT00390000018047	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.a.a.a #34	ENSGT00940000154520.a.a.b #34	ENSGT00940000154520.a.b #34	ENSGT00940000161205	ENSGT00940000165915.b	ENSGT00940000165915.a
Japanese quail	MODERN SPECIES	11	SERPINB8 (ENSCJPG00005015616)	SERPINB1 (ENSCJPG00005015617)	ENSCJPG00005015618	MYLK4 (ENSCJPG00005015619)	GMDS (ENSCJPG00005015622)	FOXC1 (ENSCJPG00005015623)	FOXF2 (ENSCJPG00005015624)	FOXQ1 (ENSCJPG00005015625)	EXOC2 (ENSCJPG00005015629)	IRF4 (ENSCJPG00005015631)	DUSP22 (ENSCJPG00005015632)	NQO2 (ENSCJPG00005015634)	CDH20 (ENSCJPG00005015646) #17	RNF152 (ENSCJPG00005015648) #20	PIGN (ENSCJPG00005015650) #21	RELCH (ENSCJPG00005016435) #22	TNFRSF11A (ENSCJPG00005016738) #23	ZCCHC2 (ENSCJPG00005016739) #24	PHLPP1 (ENSCJPG00005016771) #25	ENSCJPG00005016772	BCL2 (ENSCJPG00005016773) #27	KDSR (ENSCJPG00005016774) #28	VPS4B (ENSCJPG00005016775) #29	SERPINB5 (ENSCJPG00005016776) #30	SERPINB11 (ENSCJPG00005016777) #35	RIPK1 (ENSCJPG00005016788)	BPHL (ENSCJPG00005016789)	ENSCJPG00005016790	ENSCJPG00005016791	PSMG4 (ENSCJPG00005016792)	SLC22A23 (ENSCJPG00005016793)
Phasianidae_b	ANCESTRAL SPECIES	1	ENSGT00390000018047	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154673.b	ENSGT00940000154187.a.a	ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.a.a.a #34	ENSGT00940000154520.a.a.b #34	ENSGT00940000154520.a.b #34	ENSGT00940000161205	ENSGT00940000165915.b	ENSGT00940000165915.a
Chicken	MODERN SPECIES	11	ENSGALG00010000768	CDH10 (ENSGALG00010000760)	ENSGALG00010000594	ENSGALG00010000600	CDH9 (ENSGALG00010000597)	ENSGALG00010011053	ENSGALG00010011048	CDH6 (ENSGALG00010011040)	DROSHA (ENSGALG00010011033)	C2H5ORF22 (ENSGALG00010011022)	MC4R (ENSGALG00010012132) #16	ENSGALG00010009733	CDH20 (ENSGALG00010009727) #17	RNF152 (ENSGALG00010012125) #20	PIGN (ENSGALG00010012075) #21	RELCH (ENSGALG00010011993) #22	TNFRSF11A (ENSGALG00010011976) #23	ZCCHC2 (ENSGALG00010011963) #24	PHLPP1 (ENSGALG00010011899) #25	ENSGALG00010011861	BCL2 (ENSGALG00010011843) #27	KDSR (ENSGALG00010011817) #28	VPS4B (ENSGALG00010011802) #29	SERPINB5 (ENSGALG00010011780) #30	SERPINB11 (ENSGALG00010011758) #35	OVALX (ENSGALG00010011714) #34	OVALY (ENSGALG00010011686) #34	OVAL (ENSGALG00010011679) #34	ENSGALG00010011674	SERPINB10B (ENSGALG00010011664)	SERPINB6 (ENSGALG00010011651)
Turkey	MODERN SPECIES	22	ENSMGAG00000002510	CDKAL1 (ENSMGAG00000002506)	ENSMGAG00000008471	ENSMGAG00000008423	ENSMGAG00000017213	ENSMGAG00000019228	ENSMGAG00000005239	ENSMGAG00000005273	ENSMGAG00000017842	CDH6 (ENSMGAG00000005159)	DROSHA (ENSMGAG00000005087)	C5orf22 (ENSMGAG00000005059)	CDH20 (ENSMGAG00000004992) #17	RNF152 (ENSMGAG00000015415) #20	PIGN (ENSMGAG00000004945) #21	RELCH (ENSMGAG00000004882) #22	TNFRSF11A (ENSMGAG00000004863) #23	ZCCHC2 (ENSMGAG00000004834) #24	BCL2 (ENSMGAG00000004792) #27	KDSR (ENSMGAG00000004767) #28	VPS4B (ENSMGAG00000004729) #29	SERPINB5 (ENSMGAG00000004714) #30	SERPINB11 (ENSMGAG00000004633) #35	ENSMGAG00000004613 #34	ENSMGAG00000004550 #34	SERPINB14 (ENSMGAG00000016695) #34	SERPINB10 (ENSMGAG00000004382)	ENSMGAG00000004373	ENSMGAG00000018556	ENSMGAG00000004267	SERPINB1 (ENSMGAG00000004352)
African ostrich	MODERN SPECIES	248													CDH20 (ENSSCUG00000003352) #17	RNF152 (ENSSCUG00000003353) #20	PIGN (ENSSCUG00000003355) #21	RELCH (ENSSCUG00000003369) #22	ENSSCUG00000003383 #23	ENSSCUG00000003385 #23
Australian saltwater crocodile	MODERN SPECIES		MYO10 (ENSCPRG00005016306)	BASP1 (ENSCPRG00005016454)	ENSCPRG00005016456	ENSCPRG00005016472	CDH18 (ENSCPRG00005016488)	CDH12 (ENSCPRG00005016516)	CDH10 (ENSCPRG00005016543)	CDH9 (ENSCPRG00005016570)	ENSCPRG00005016585	CDH6 (ENSCPRG00005016599)	DROSHA (ENSCPRG00005016610)	C5orf22 (ENSCPRG00005016614)	CDH20 (ENSCPRG00005016626) #17	RNF152 (ENSCPRG00005016639) #20	PIGN (ENSCPRG00005016657) #21	RELCH (ENSCPRG00005016833) #22	TNFRSF11A (ENSCPRG00005017419) #23	ZCCHC2 (ENSCPRG00005017427) #24	PHLPP1 (ENSCPRG00005017438) #25	ENSCPRG00005017476	KDSR (ENSCPRG00005017478) #28	ENSCPRG00005017496 #29	SERPINB5 (ENSCPRG00005017498) #30	ENSCPRG00005017513 #34	ENSCPRG00005017553	SERPINB10 (ENSCPRG00005017554)	ENSCPRG00005017585	SERPINB8 (ENSCPRG00005017689)	SERPINB1 (ENSCPRG00005017691)	WRNIP1 (ENSCPRG00005017695)	MYLK4 (ENSCPRG00005017700)
Cryptodira	ANCESTRAL SPECIES	7							ENSGT00940000160496.b	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560 #35	ENSGT00940000154520.a #34	ENSGT00940000161205	ENSGT00940000165915	ENSGT00940000154835.C	ENSGT00940000154573	ENSGT00390000008538
Testudinoidea	ANCESTRAL SPECIES		ENSGT00940000158930.a	ENSGT00950000182937.A.b	ENSGT00950000182869.e.b	ENSGT00940000161614	ENSGT00940000156918	ENSGT00940000160496.b	ENSGT00390000015797.e.a	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560.a #35	ENSGT00940000154520.a.d #34	ENSGT00940000154835.C.p.b.a	ENSGT00940000154835.C.p.b.b	ENSGT00940000161205	ENSGT00940000165915	ENSGT00940000154835.C.p.a
Emydidae	ANCESTRAL SPECIES		ENSGT00940000158930.a	ENSGT00950000182937.A.b	ENSGT00950000182869.e.b	ENSGT00940000161614	ENSGT00940000156918	ENSGT00940000160496.b	ENSGT00390000015797.e.a	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560.a #35	ENSGT00940000154520.a.d #34	ENSGT00940000154835.C.p.b.a	ENSGT00940000154835.C.p.b.b	ENSGT00940000154520.a.c #34	ENSGT00940000161205	ENSGT00940000165915
Three-toed box turtle	MODERN SPECIES	20	IKBKB (ENSTMTG00000002740)	VDAC3 (ENSTMTG00000002755)	DKK4 (ENSTMTG00000002762)	POLB (ENSTMTG00000002765)	CDH9 (ENSTMTG00000002774)	ENSTMTG00000002789	ENSTMTG00000002792	CDH6 (ENSTMTG00000002796)	DROSHA (ENSTMTG00000002808)	C5orf22 (ENSTMTG00000005334)	MC4R (ENSTMTG00000005343) #16	ENSTMTG00000005363	CDH20 (ENSTMTG00000005534) #17	RNF152 (ENSTMTG00000005566) #20	PIGN (ENSTMTG00000005695) #21	RELCH (ENSTMTG00000006610) #22	TNFRSF11A (ENSTMTG00000006700) #23	ZCCHC2 (ENSTMTG00000006726) #24	PHLPP1 (ENSTMTG00000006765) #25	ENSTMTG00000006860	BCL2 (ENSTMTG00000006876) #27	KDSR (ENSTMTG00000006884) #28	VPS4B (ENSTMTG00000006914) #29	SERPINB5 (ENSTMTG00000006943) #30	SERPINB11 (ENSTMTG00000006987) #35	ENSTMTG00000007359 #34	ENSTMTG00000008043	ENSTMTG00000008098 #34	ENSTMTG00000008593	ENSTMTG00000009166	SERPINB1 (ENSTMTG00000009178)
painted turtle	MODERN SPECIES	745	DBT (ENSCPBG00000026664)	RTCA (ENSCPBG00000026658)	VCAM1 (ENSCPBG00000026651)	GPR88 (ENSCPBG00000026645)	CDC14A (ENSCPBG00000026641)	EXTL2 (ENSCPBG00000026640)	SLC30A7 (ENSCPBG00000026639)	DPH5 (ENSCPBG00000026637)	ENSCPBG00000026633	S1PR1 (ENSCPBG00000026630)	OLFM3 (ENSCPBG00000026629)	ENSCPBG00000026627	CDH20 (ENSCPBG00000026622) #17	RNF152 (ENSCPBG00000026620) #20	PIGN (ENSCPBG00000026606) #21	RELCH (ENSCPBG00000026599) #22	ENSCPBG00000026592 #23	ZCCHC2 (ENSCPBG00000026588) #24	PHLPP1 (ENSCPBG00000026585) #25	ENSCPBG00000026584	BCL2 (ENSCPBG00000026582) #27	KDSR (ENSCPBG00000026581) #28	VPS4B (ENSCPBG00000026580) #29	SERPINB5 (ENSCPBG00000026578) #30	SERPINB11 (ENSCPBG00000026577) #35	SNX18 (ENSCPBG00000026574)	ENSCPBG00000026570	ESM1 (ENSCPBG00000026569)	GZMA (ENSCPBG00000026568)	GPX8 (ENSCPBG00000026563)	MCIDAS (ENSCPBG00000026558)
Testudinidae	ANCESTRAL SPECIES	4								ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000160674 #30	ENSGT00940000161560.a #35	ENSGT00940000154520.a.d #34	ENSGT00940000154520.a.c.b #34	ENSGT00940000161560.b #35	ENSGT00940000154520.a.c.a #34	ENSGT00940000154835.C.p.b.a	ENSGT00940000154835.C.p.b.b	ENSGT00940000161205
Goode s thornscrub tortoise	MODERN SPECIES	11	ENSGEVG00005001568	ENSGEVG00005001584	POLB (ENSGEVG00005001632)	DKK4 (ENSGEVG00005001705)	ENSGEVG00005001720	ENSGEVG00005001739	ENSGEVG00005001754	CDH6 (ENSGEVG00005001838)	DROSHA (ENSGEVG00005001888)	C5orf22 (ENSGEVG00005001930)	MC4R (ENSGEVG00005001944) #16	ENSGEVG00005001965	CDH20 (ENSGEVG00005002004) #17	RNF152 (ENSGEVG00005002020) #20	PIGN (ENSGEVG00005002044) #21	RELCH (ENSGEVG00005002567) #22	TNFRSF11A (ENSGEVG00005003807) #23	ZCCHC2 (ENSGEVG00005003897) #24	PHLPP1 (ENSGEVG00005003942) #25	BCL2 (ENSGEVG00005003964) #27	KDSR (ENSGEVG00005003972) #28	VPS4B (ENSGEVG00005003984) #29	SERPINB5 (ENSGEVG00005003990) #30	SERPINB11 (ENSGEVG00005004059) #35	ENSGEVG00005004357 #34	ENSGEVG00005004389 #34	ENSGEVG00005004429	ENSGEVG00005004451	ENSGEVG00005004503	ENSGEVG00005004517	ENSGEVG00005004529 #34
Abingdon island giant tortoise	MODERN SPECIES	1320															ENSCABG00000020607 #21	RELCH (ENSCABG00000020153) #22	TNFRSF11A (ENSCABG00000020061) #23
Chinese turtle	MODERN SPECIES	1064													CDH20 (ENSPSIG00000007056) #17	RNF152 (ENSPSIG00000001833) #20	PIGN (ENSPSIG00000007645) #21	RELCH (ENSPSIG00000007662) #22	TNFRSF11A (ENSPSIG00000007827) #23	ZCCHC2 (ENSPSIG00000007840) #24	PHLPP1 (ENSPSIG00000003216) #25	ENSPSIG00000003281	BCL2 (ENSPSIG00000003288) #27	KDSR (ENSPSIG00000003293) #28	VPS4B (ENSPSIG00000003366) #29	SERPINB5 (ENSPSIG00000003426) #30	SERPINB11 (ENSPSIG00000003447) #35	ENSPSIG00000003450 #34
Anura	ANCESTRAL SPECIES	1	ENSGT00940000160746	ENSGT00940000155469	ENSGT00730000111450	ENSGT00940000157512	ENSGT00940000154187.a.b	ENSGT00940000154187.a.a	ENSGT00940000160496	ENSGT00940000154673.a	ENSGT00730000111052	ENSGT00390000001801	ENSGT01030000234510.a.a.a.a.a.b #16	ENSGT00940000164469	ENSGT00940000158167 #17	ENSGT00730000111317 #20	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23	ENSGT00520000055637.A.a #24	ENSGT00940000158137.c.a #25	ENSGT00950000183102.A.b.a	ENSGT01090000260003.a.b.b.a.a.b.a #27	ENSGT00940000156961 #28	ENSGT00940000154973 #29	ENSGT00940000164275.d	ENSGT00940000160674 #30	ENSGT00940000154835.C	ENSGT00940000154573	ENSGT00940000161560 #35	ENSGT00940000154520 #34	ENSGT00390000008538	ENSGT00940000156211.b
Frog	MODERN SPECIES	6	cdh10 (ENSXETG00000002106)	ENSXETG00000046030	cdh9 (ENSXETG00000020131)	ENSXETG00000037555	ENSXETG00000047850	ENSXETG00000037218	ENSXETG00000039848	cdh6 (ENSXETG00000016687)	drosha (ENSXETG00000016701)	c5orf22 (ENSXETG00000005865)	MC4R (ENSXETG00000040571) #16	gad1.2 (ENSXETG00000005863)	cdh20 (ENSXETG00000005857) #17	rnf152 (ENSXETG00000048581) #20	pign (ENSXETG00000031074) #21	relch (ENSXETG00000024133) #22	tnfrsf11a (ENSXETG00000000517) #23	zcchc2 (ENSXETG00000032980) #24	phlpp1 (ENSXETG00000031560) #25	XB5872520 [provisional] (ENSXETG00000031429)	ENSXETG00000044092	ENSXETG00000027592	bcl2 (ENSXETG00000035771) #27	kdsr (ENSXETG00000040600) #28	vps4b (ENSXETG00000000638) #29	XB5872372 [provisional] (ENSXETG00000000637)	XB5740036 [provisional] (ENSXETG00000030683)	serpinb5 (ENSXETG00000027590) #30	serpinb10 (ENSXETG00000032542)	serpinb6 (ENSXETG00000027588)	ENSXETG00000042280
Leishan spiny toad	MODERN SPECIES	8	ENSLLEG00000012591	CDH6 (ENSLLEG00000012511)	DROSHA (ENSLLEG00000012129)	C5orf22 (ENSLLEG00000011880)	MC4R (ENSLLEG00000011826) #16	ENSLLEG00000021855	ENSLLEG00000021646	ENSLLEG00000021602	ENSLLEG00000021560	ENSLLEG00000021543	ENSLLEG00000021497	CDH20 (ENSLLEG00000020783) #17	RNF152 (ENSLLEG00000020702) #20	PIGN (ENSLLEG00000019674) #21	ENSLLEG00000019599	RELCH (ENSLLEG00000013493) #22	TNFRSF11A (ENSLLEG00000013078) #23	ZCCHC2 (ENSLLEG00000012678) #24	ENSLLEG00000012428	PHLPP1 (ENSLLEG00000012054) #25	ENSLLEG00000012006	ENSLLEG00000011875	BCL2 (ENSLLEG00000011788) #27	KDSR (ENSLLEG00000011595) #28	VPS4B (ENSLLEG00000010866) #29	ENSLLEG00000010727	ENSLLEG00000010648	ENSLLEG00000010584	SERPINB5 (ENSLLEG00000010481) #30	SERPINB8 (ENSLLEG00000010369)	ENSLLEG00000010341 #35
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	1359												PIGN (ENSLACG00000003178) #21	ENSLACG00000007527	ENSLACG00000008221	ENSLACG00000022479	ENSLACG00000009537 #22	relch (ENSLACG00000010489) #22
Coelacanth	MODERN SPECIES	1359											PIGN (ENSLACG00000003178) #21	ENSLACG00000007527	ENSLACG00000008221	ENSLACG00000022479	ENSLACG00000009537 #22	relch (ENSLACG00000010489) #22
Actinopterygii	ANCESTRAL SPECIES	595														ENSGT00940000175299	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000161211 #23
Neopterygii	ANCESTRAL SPECIES	106	ENSGT00940000164415	ENSGT00390000003628.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142	ENSGT00940000159647	ENSGT00940000165938	ENSGT00940000154574.c	ENSGT00940000154952.a.b	ENSGT00940000159419	ENSGT00390000001846	ENSGT01030000235025	ENSGT00940000159542	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000164667.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT00940000154516.b	ENSGT00940000154774	ENSGT00940000155013	ENSGT00940000157738	ENSGT00940000162104	ENSGT00390000000706	ENSGT00940000161026	ENSGT00940000157664	ENSGT00940000154486.a.b	ENSGT01030000234613.a.a	ENSGT00390000017728
Osteoglossocephalai	ANCESTRAL SPECIES	40	ENSGT00940000155171.a.b	ENSGT00500000044852.a.a.b	ENSGT00390000012054.a	ENSGT00390000012731.a.a	ENSGT00500000044852.a.a.a	ENSGT00940000154574.c	ENSGT00940000154952.a.b	ENSGT00940000159419	ENSGT00970000194071	ENSGT00390000001846	ENSGT01030000235025	ENSGT00940000159542	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT00940000154516.b	ENSGT00940000154774	ENSGT00940000155013	ENSGT00940000157738	ENSGT00940000162104	ENSGT00390000000706
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	457														ENSGT01030000234518.E.d.a	ENSGT00390000017600 #21	ENSGT00390000004385.k #22	ENSGT00940000168990.e	ENSGT00940000164667.a	ENSGT00940000164667.b	ENSGT00390000001319
Asian bonytongue	MODERN SPECIES	24	MTRR (ENSSFOG00015012149)	cmbl (ENSSFOG00015012137)	ENSSFOG00015012016	si:rp71-1f1.4 (ENSSFOG00015011981)	ropn1l (ENSSFOG00015011970)	ANKRD33B (ENSSFOG00015011958)	dap (ENSSFOG00015028197)	ENSSFOG00015011835	zc2hc1a (ENSSFOG00015011761)	ENSSFOG00015011738	ENSSFOG00015011644	pex2 (ENSSFOG00015031072)	ZFHX4 (ENSSFOG00015011589)	ENSSFOG00015032846	pign (ENSSFOG00015011456) #21	relch (ENSSFOG00015011367) #22	ENSSFOG00015026857	ENSSFOG00015011330	si:dkey-94e7.2 (ENSSFOG00015011320)	sec61g (ENSSFOG00015011263)	CNTNAP2 (ENSSFOG00015011161)	CUL1 (ENSSFOG00015011089)	ezh2 (ENSSFOG00015010991)	ENSSFOG00015032360	ENSSFOG00015026601	ANKS6 (ENSSFOG00015033002)	ENSSFOG00015010661	EXOC3 (ENSSFOG00015010620)	serpinb1l4 (ENSSFOG00015010603)	ENSSFOG00015010557	ENSSFOG00015010533 ##24
P. kingsleyae	MODERN SPECIES	590														ENSPKIG00000007663	pign (ENSPKIG00000007477) #21	relch (ENSPKIG00000006955) #22	ENSPKIG00000006703	si:dkey-94e7.2 (ENSPKIG00000006677)	sec61g (ENSPKIG00000006649)
Osteoglossiformes	ANCESTRAL SPECIES	29	ENSGT00390000000183	ENSGT00940000155171.a.b.a	ENSGT00390000012054.a	ENSGT00390000012731.a.a	ENSGT00500000044852.a.a.a	ENSGT00940000154574.c	ENSGT00940000154952.a.b	ENSGT00940000159419.b	ENSGT00970000194071.d	ENSGT00970000194071.c	ENSGT00990000205760	ENSGT00390000001846	ENSGT00940000159542	ENSGT00940000158224	ENSGT01030000234518.E.d.b	ENSGT00390000004385.l #22	ENSGT00940000168990.f
P. kingsleyae	MODERN SPECIES	472													ZFHX4 (ENSPKIG00000008778)	hnf4g (ENSPKIG00000008725)	ENSPKIG00000008690	relch (ENSPKIG00000008462) #22
Asian bonytongue	MODERN SPECIES	7	dtna (ENSSFOG00015004860)	KLHL14 (ENSSFOG00015004977)	ENSSFOG00015032413	mapre2 (ENSSFOG00015005007)	SPIDR (ENSSFOG00015005038)	cebpd (ENSSFOG00015005052)	mcm4 (ENSSFOG00015005078)	ube2v2 (ENSSFOG00015031636)	ctnnd2b (ENSSFOG00015005191)	PKIA (ENSSFOG00015031041)	ZFHX4 (ENSSFOG00015005272)	ENSSFOG00015031715	hnf4g (ENSSFOG00015018998)	ENSSFOG00015024884	ENSSFOG00015018991	relch (ENSSFOG00015018836) #22	ENSSFOG00015018804	ENSSFOG00015027677	ENSSFOG00015018775	ENSSFOG00015018734	tpk1 (ENSSFOG00015018681)	CNTNAP2 (ENSSFOG00015018636)	ENSSFOG00015029728	CUL1 (ENSSFOG00015018579)	ezh2 (ENSSFOG00015018492)	pdia4 (ENSSFOG00015018458)	zgc:162895 (ENSSFOG00015018432)	RAMP3 (ENSSFOG00015018419)	mcm6l (ENSSFOG00015018384)	exoc3 (ENSSFOG00015018281)	pigm (ENSSFOG00015018263)
Clupeocephala	ANCESTRAL SPECIES	34	ENSGT00390000000183	ENSGT00940000155171.a.a	ENSGT00390000012054.a	ENSGT00390000012731.a.a	ENSGT00500000044852.a.a.a	ENSGT00940000154574.c	ENSGT00940000154952.a.b	ENSGT00940000159419	ENSGT00970000194071	ENSGT00390000001846	ENSGT01030000235025	ENSGT00940000159542	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT00940000164262	ENSGT00940000154516.a.a	ENSGT00940000154774	ENSGT00940000155013	ENSGT00940000157738	ENSGT00940000162104
Otomorpha	ANCESTRAL SPECIES	111	ENSGT00550000074988	ENSGT00390000000183	ENSGT00390000012054.a	ENSGT00390000012731.a.a	ENSGT00500000044852.a.a.a	ENSGT00940000154574.c	ENSGT00940000159419	ENSGT00970000194071	ENSGT00670000099350	ENSGT00390000001846	ENSGT01030000235025	ENSGT00940000159542	ENSGT00940000158224	ENSGT00940000175299	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.a.a	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT00940000164262	ENSGT00940000154774	ENSGT00940000155013	ENSGT00940000157738	ENSGT00940000162104	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711	ENSGT00940000153451.a.b
Clupeiformes	ANCESTRAL SPECIES	47	ENSGT00940000155171.a.a	ENSGT00390000012054.a	ENSGT00390000012731.a.a	ENSGT00500000044852.a.a.a	ENSGT00940000154574.c	ENSGT00940000154952.a.b	ENSGT00940000159419	ENSGT00970000194071	ENSGT00670000099350	ENSGT00390000001846	ENSGT01030000235025	ENSGT00940000159542	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.a.a	ENSGT00390000001319.f	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT00940000154774	ENSGT00940000155013	ENSGT00940000157738	ENSGT00940000162104	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711	ENSGT00940000153451.a.b
Denticle herring	MODERN SPECIES	11	si:rp71-1f1.4 (ENSDCDG00000017574)	ropn1l (ENSDCDG00000017569)	ANKRD33B (ENSDCDG00000017566)	dap (ENSDCDG00000017559)	ENSDCDG00000017554	ENSDCDG00000014221	zc2hc1a (ENSDCDG00000013857)	ENSDCDG00000013844	ENSDCDG00000013838	pex2 (ENSDCDG00000035844)	ENSDCDG00000035843	ZFHX4 (ENSDCDG00000035840)	hnf4g (ENSDCDG00000035834)	GPR141 (ENSDCDG00000035832)	pign (ENSDCDG00000035830) #21	relch (ENSDCDG00000035819) #22	ENSDCDG00000035803	ENSDCDG00000035802	sec61g (ENSDCDG00000035801)	tpk1 (ENSDCDG00000035799)	CNTNAP2 (ENSDCDG00000035784)	cul1b (ENSDCDG00000035781)	ezh2 (ENSDCDG00000035776)	pdia4 (ENSDCDG00000035760)	ENSDCDG00000035756	spag6 (ENSDCDG00000035754)	BMI1 (ENSDCDG00000035753)	commd3 (ENSDCDG00000035751)	MLLT10 (ENSDCDG00000035748)	ENSDCDG00000035742	ENSDCDG00000035741
Atlantic herring	MODERN SPECIES	8	ENSCHAG00000023359	ENSCHAG00000023312	ENSCHAG00000023303	ENSCHAG00000023297	ENSCHAG00000023290 ##24	ENSCHAG00000023280	ENSCHAG00000023275	ENSCHAG00000023260	ENSCHAG00000023255	vstm2a (ENSCHAG00000023248)	HECW1 (ENSCHAG00000022552)	stk17a (ENSCHAG00000022503)	GPR141 (ENSCHAG00000022496)	GPR141 (ENSCHAG00000022490)	pign (ENSCHAG00000022031) #21	relch (ENSCHAG00000018267) #22	ENSCHAG00000018091	ENSCHAG00000017866	ENSCHAG00000017621	zgc:112332 (ENSCHAG00000017598)	sec61g (ENSCHAG00000017583)	tpk1 (ENSCHAG00000017569)	CNTNAP2 (ENSCHAG00000012690)	CUL1 (ENSCHAG00000012352)	ezh2 (ENSCHAG00000011817)	pdia4 (ENSCHAG00000011683)	ENSCHAG00000011587	spag6 (ENSCHAG00000011481)	bmi1a (ENSCHAG00000011440)	commd3 (ENSCHAG00000011417)	ENSCHAG00000011110
Otophysi	ANCESTRAL SPECIES	42	ENSGT00940000164858	ENSGT00940000165167	ENSGT00510000048324	ENSGT00940000154621.a.b.b.a	ENSGT00940000154607.b.a	ENSGT00940000158377.b.i.a	ENSGT00530000063779.B.b	ENSGT00950000183072.a.a.a	ENSGT01080000257410.B.a.b.b.b	ENSGT00940000157544	ENSGT00390000005870	ENSGT00940000155894	ENSGT00940000159307	ENSGT00940000157108	ENSGT00390000015084.c.a	ENSGT00390000004385 #22	ENSGT00390000016016.A	ENSGT00940000154516.a.b.l	ENSGT00940000164262	ENSGT00940000154774	ENSGT00940000155013	ENSGT00940000157738	ENSGT00940000162104	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711	ENSGT00940000153451.a.b	ENSGT00940000156508.j	ENSGT00940000157476	ENSGT00940000155240.B
Characiphysae	ANCESTRAL SPECIES	17	ENSGT00940000164858	ENSGT00940000165167	ENSGT00510000048324	ENSGT00940000154621.a.b.b.a	ENSGT00940000154607.b.a	ENSGT00940000158377.b.i.a	ENSGT00530000063779.B.b	ENSGT00950000183072.a.a.a	ENSGT01080000257410.B.a.b.b.b	ENSGT00940000157544	ENSGT00390000005870	ENSGT00940000155894.q	ENSGT00940000159307	ENSGT00940000157108	ENSGT00390000015084.c.a	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.a.a	ENSGT00940000155013	ENSGT00940000157738	ENSGT00940000162104	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711	ENSGT00940000153451.a.b	ENSGT00940000156508.j	ENSGT00940000157476	ENSGT00940000155240.B	ENSGT00440000034309	ENSGT01050000244868
Channel catfish	MODERN SPECIES	15	acaa1 (ENSIPUG00000011849)	map3k22 (ENSIPUG00000012014)	myd88 (ENSIPUG00000012161)	oxsr1 (ENSIPUG00000012254)	slc22a13 (ENSIPUG00000012346)	ENSIPUG00000012384	ENSIPUG00000012410	csrnp1b (ENSIPUG00000012422)	SLCO5A1 (ENSIPUG00000012436)	sulf1 (ENSIPUG00000012470)	c23h8orf34 (ENSIPUG00000012603)	PREX2 (ENSIPUG00000012653)	cpa6 (ENSIPUG00000012896)	arfgef1 (ENSIPUG00000012943)	CSPP1 (ENSIPUG00000013098)	kiaa1468 (ENSIPUG00000013151) #22	CD40 (ENSIPUG00000013219)	ENSIPUG00000013256	ENSIPUG00000013261	ENSIPUG00000013272	hephl1a (ENSIPUG00000013290)	ENSIPUG00000013337	CNTNAP2 (ENSIPUG00000013361)	panx1 (ENSIPUG00000013433)	tpk1 (ENSIPUG00000013460)	sec61g (ENSIPUG00000013553)	ENSIPUG00000013559	ENSIPUG00000013570	CNTNAP2 (ENSIPUG00000013587)	apoob (ENSIPUG00000013681)	si:rp71-1f1.4 (ENSIPUG00000013702)
Characiphysae_b	ANCESTRAL SPECIES	52	ENSGT00940000164858	ENSGT00940000165167	ENSGT00510000048324	ENSGT00940000154621.a.b.b.a	ENSGT00940000154607.b.a	ENSGT00940000158377.b.i.a	ENSGT00530000063779.B.b	ENSGT00950000183072.a.a.a	ENSGT01080000257410.B.a.b.b.b	ENSGT00940000157544	ENSGT00390000005870	ENSGT00940000155894.q	ENSGT00940000159307	ENSGT00940000157108	ENSGT00390000015084.c.a	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.a.a	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b.l	ENSGT00940000155013	ENSGT00940000157738	ENSGT00940000162104	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711	ENSGT00940000153451.a.b	ENSGT00940000156508.j	ENSGT00940000157476
Characoidei	ANCESTRAL SPECIES	14	ENSGT00940000164858	ENSGT00940000165167	ENSGT00510000048324	ENSGT00940000154621.a.b.b.a	ENSGT00940000154607.b.a	ENSGT00940000158377.b.i.a	ENSGT00530000063779.B.b	ENSGT00950000183072.a.a.a	ENSGT01080000257410.B.a.b.b.b	ENSGT00940000157544	ENSGT00390000005870	ENSGT00940000155894.q	ENSGT00940000159307	ENSGT00940000157108	ENSGT00390000015084.c.a	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.a.a	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b.l	ENSGT00940000154774	ENSGT00940000155013	ENSGT00940000157738	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711	ENSGT00940000153451.a.b	ENSGT00940000156508.j	ENSGT00940000157476
Red-bellied piranha	MODERN SPECIES	8	map3k22 (ENSPNAG00000019613)	cry-dash (ENSPNAG00000019588)	myd88 (ENSPNAG00000019544)	oxsr1b (ENSPNAG00000019531)	slc22a13b (ENSPNAG00000019510)	LIMD2 (ENSPNAG00000019502)	ENSPNAG00000019490	csrnp1b (ENSPNAG00000019477)	SLCO5A1 (ENSPNAG00000019460)	sulf1 (ENSPNAG00000019431)	zgc:162928 (ENSPNAG00000019179)	PREX2 (ENSPNAG00000019161)	CPA6 (ENSPNAG00000019071)	ARFGEF1 (ENSPNAG00000019034)	CSPP1 (ENSPNAG00000018733)	relch (ENSPNAG00000018652) #22	ENSPNAG00000018194	ENSPNAG00000018146	zgc:112332 (ENSPNAG00000018119)	sec61g (ENSPNAG00000018100)	tpk1 (ENSPNAG00000018079)	CNTNAP2 (ENSPNAG00000018046)	cul1b (ENSPNAG00000018024)	ezh2 (ENSPNAG00000017892)	pdia4 (ENSPNAG00000017785)	MLLT10 (ENSPNAG00000017776)	SKIDA1 (ENSPNAG00000017751)	pip4k2aa (ENSPNAG00000017738)	ARMC3 (ENSPNAG00000017700)	msrb2 (ENSPNAG00000017615)	c8g (ENSPNAG00000017610)
Mexicana tetra	MODERN SPECIES	797															ENSAMXG00000001097	relch (ENSAMXG00000001076) #22
Electric eel	MODERN SPECIES	1071																relch (ENSEEEG00000017035) #22	ENSEEEG00000017295	xkr9 (ENSEEEG00000017296)
Cyprinoidei	ANCESTRAL SPECIES	20	ENSGT00940000165167	ENSGT00510000048324	ENSGT00940000154621.a.b.b.a	ENSGT00940000154607.b.a	ENSGT00940000158377.b.i.a.b	ENSGT00940000158377.b.i.a.a	ENSGT00530000063779.B.b	ENSGT00950000183072.a.a.a	ENSGT01080000257410.B.a.b.b.b	ENSGT00940000157544	ENSGT00390000005870	ENSGT00940000155894.o	ENSGT00940000159307	ENSGT00940000157108	ENSGT00390000015084.c.a	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00390000016016.A	ENSGT00940000154516.a.b.l	ENSGT00940000164262	ENSGT00940000154774	ENSGT00940000155013	ENSGT00940000157738	ENSGT00940000162104	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711	ENSGT00940000153451.a.b	ENSGT00940000156508.j	ENSGT00940000157476
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	98							ENSGT00940000158377.b.i.a.b	ENSGT00950000183072.a.a.a.a	ENSGT01080000257410.B.a.b.b.b.a	ENSGT00940000157544.f	ENSGT00390000005870.e	ENSGT00940000155894.o.a	ENSGT00940000159307.b	ENSGT00940000157108.w	ENSGT00390000015084.c.a.f	ENSGT00390000004385.m #22	ENSGT00940000168990.b	ENSGT00940000164667.a	ENSGT00940000164667.b.a.a.a.a	ENSGT00940000164667.b.a.a.b	ENSGT00390000001319.h	ENSGT00390000016016.A.t	ENSGT00940000154516.a.b.k.a	ENSGT00940000154774.z.a	ENSGT00940000155013.y	ENSGT00940000157738.h	ENSGT00940000162104	ENSGT00900000141099.i	ENSGT00940000156042.z.b	ENSGT00390000015971	ENSGT00940000157711.d
Goldfish	MODERN SPECIES	16	zic4 (ENSCARG00000026258)	ENSCARG00000026264	ENSCARG00000026283	plod2 (ENSCARG00000026664)	OXSR1 (ENSCARG00000042093)	slc22a13b (ENSCARG00000042191)	LIMD2 (ENSCARG00000042222)	csrnp1b (ENSCARG00000042231)	SLCO5A1 (ENSCARG00000042248)	sulf1 (ENSCARG00000042336)	zgc:162928 (ENSCARG00000043383)	PREX2 (ENSCARG00000043714)	CPA6 (ENSCARG00000047273)	ARFGEF1 (ENSCARG00000047488)	CSPP1 (ENSCARG00000048011)	relch (ENSCARG00000048440) #22	ENSCARG00000050935	ENSCARG00000050948	ENSCARG00000050954	zgc:112332 (ENSCARG00000050970)	ENSCARG00000051038	sec61g (ENSCARG00000051056)	tpk1 (ENSCARG00000051082)	CNTNAP2 (ENSCARG00000051289)	ENSCARG00000052721	cul1b (ENSCARG00000052764)	ezh2 (ENSCARG00000053020)	pdia4 (ENSCARG00000053155)	ENSCARG00000053256	spag6 (ENSCARG00000053356)	bmi1a (ENSCARG00000053367)
Cyprininae_a	ANCESTRAL SPECIES	19	ENSGT00940000164858.a	ENSGT00940000165167.d	ENSGT00510000048324.d	ENSGT00940000154621.a.b.b.a.a	ENSGT00940000154607.b.a.q	ENSGT00940000158377.b.i.a.b	ENSGT00530000063779.B.b.b	ENSGT00950000183072.a.a.a.a	ENSGT01080000257410.B.a.b.b.b.a	ENSGT00940000157544.f	ENSGT00390000005870.e	ENSGT00940000155894.o.a	ENSGT00940000159307.b	ENSGT00940000157108.w	ENSGT00390000015084.c.a.f	ENSGT00390000004385.m #22	ENSGT00940000168990.b	ENSGT00940000164667.a	ENSGT00940000164667.b.a.a.a.a	ENSGT00940000164667.b.a.a.b	ENSGT00390000001319.h	ENSGT00390000016016.A.t	ENSGT00940000154516.a.b.k.a	ENSGT01100000263576.a.a.b.a	ENSGT00940000154774.z.a	ENSGT00940000155013.y	ENSGT00940000157738.h	ENSGT00940000162104	ENSGT00900000141099.i	ENSGT00940000156042.z.b	ENSGT00390000015971
Common carp reference	MODERN SPECIES	40	map3k22 (ENSCCRG00000021289)	cry-dash (ENSCCRG00000021279)	myd88 (ENSCCRG00000021276)	oxsr1b (ENSCCRG00000028775)	slc22a13b (ENSCCRG00000001426)	ENSCCRG00000065957	ENSCCRG00000075969	csrnp1b (ENSCCRG00000064440)	ENSCCRG00000061972	sulf1 (ENSCCRG00000018764)	zgc:162928 (ENSCCRG00000071523)	PREX2 (ENSCCRG00000063334)	CPA6 (ENSCCRG00000021626)	ARFGEF1 (ENSCCRG00000076582)	CSPP1 (ENSCCRG00000041624)	relch (ENSCCRG00000015824) #22	ENSCCRG00000017299	ENSCCRG00000062509	zgc:112332 (ENSCCRG00000064508)	sec61g (ENSCCRG00000010917)	tpk1 (ENSCCRG00000010913)	ENSCCRG00000079463	CNTNAP2 (ENSCCRG00000059402)	ENSCCRG00000072616	cul1b (ENSCCRG00000054420)	ENSCCRG00000062448	ENSCCRG00000063629	ezh2 (ENSCCRG00000080855)	pdia4 (ENSCCRG00000079379)	ENSCCRG00000081117	spag6 (ENSCCRG00000037971)
Golden-line barbel	MODERN SPECIES	196															ENSSGRG00000031242	relch (ENSSGRG00000028841) #22	ENSSGRG00000028804	ENSSGRG00000028803	zgc:112332 (ENSSGRG00000028799)	sec61g (ENSSGRG00000028794)	tpk1 (ENSSGRG00000028793)	CNTNAP2 (ENSSGRG00000028785)	ENSSGRG00000028782	cul1b (ENSSGRG00000028535)	ezh2 (ENSSGRG00000028501)	pdia4 (ENSSGRG00000028476)	spag6 (ENSSGRG00000028466)	bmi1a (ENSSGRG00000028419)	commd3 (ENSSGRG00000028418)	MLLT10 (ENSSGRG00000028383)	SKIDA1 (ENSSGRG00000028381)
Cyprininae	ANCESTRAL SPECIES	379												ENSGT00940000155894.o.b	ENSGT00940000159307.a	ENSGT00940000157108.x	ENSGT00390000015084.c.a.e	ENSGT00390000004385.n #22	ENSGT00940000168990.a	ENSGT00940000164667.b.a.a.a.b	ENSGT00390000001319.g	ENSGT00390000016016.A.s	ENSGT00940000154516.a.b.l.b	ENSGT00940000164262	ENSGT00940000154774.z.b	ENSGT00940000155013.z	ENSGT00940000157738.g	ENSGT00900000141099.j	ENSGT00940000156042.z.a	ENSGT00940000157711.c	ENSGT00940000153451.a.b.f	ENSGT00940000156508.j.a	ENSGT00940000157476.c
Cyprininae_a	ANCESTRAL SPECIES	57	ENSGT00940000164858.b	ENSGT00940000165167.c	ENSGT00510000048324.c	ENSGT00940000154621.a.b.b.a.b	ENSGT00940000154607.b.a.r	ENSGT00940000158377.b.i.a.a	ENSGT00530000063779.B.b.a	ENSGT00950000183072.a.a.a.b	ENSGT01080000257410.B.a.b.b.b.b	ENSGT00940000157544.e	ENSGT00390000005870.f	ENSGT00940000155894.o.b	ENSGT00940000159307.a	ENSGT00940000157108.x	ENSGT00390000015084.c.a.e	ENSGT00390000004385.n #22	ENSGT00940000168990.a	ENSGT00940000164667.b.a.a.a.b	ENSGT00390000001319.g	ENSGT00390000016016.A.s	ENSGT00940000154516.a.b.l.b	ENSGT00940000164262	ENSGT00940000154774.z.b	ENSGT00940000155013.z	ENSGT00940000157738.g	ENSGT00900000141099.j	ENSGT00940000156042.z.a	ENSGT00940000157711.c	ENSGT00940000153451.a.b.f	ENSGT00940000156508.j.a	ENSGT00940000157476.c
Golden-line barbel	MODERN SPECIES	64	map3k22 (ENSSGRG00000041742)	cry-dash (ENSSGRG00000041737)	myd88 (ENSSGRG00000041724)	oxsr1b (ENSSGRG00000040601)	slc22a13b (ENSSGRG00000040594)	LIMD2 (ENSSGRG00000040590)	ENSSGRG00000040586	csrnp1b (ENSSGRG00000040582)	SLCO5A1 (ENSSGRG00000040579)	sulf1 (ENSSGRG00000040482)	zgc:162928 (ENSSGRG00000040477)	PREX2 (ENSSGRG00000040137)	CPA6 (ENSSGRG00000040098)	ARFGEF1 (ENSSGRG00000039285)	ENSSGRG00000039266	relch (ENSSGRG00000036603) #22	ENSSGRG00000036543
Common carp reference	MODERN SPECIES	14	acaa1 (ENSCCRG00000075937)	map3k22 (ENSCCRG00000008472)	cry-dash (ENSCCRG00000075363)	oxsr1b (ENSCCRG00000021159)	slc22a13b (ENSCCRG00000024497)	ENSCCRG00000073849	ENSCCRG00000028770	csrnp1b (ENSCCRG00000053358)	ENSCCRG00000080046	sulf1 (ENSCCRG00000036324)	zgc:162928 (ENSCCRG00000036292)	PREX2 (ENSCCRG00000080090)	CPA6 (ENSCCRG00000036274)	ARFGEF1 (ENSCCRG00000067213)	CSPP1 (ENSCCRG00000066335)	relch (ENSCCRG00000017320) #22	ENSCCRG00000036003	zgc:112332 (ENSCCRG00000036051)	tpk1 (ENSCCRG00000036366)	sec61g (ENSCCRG00000036353)	CNTNAP2 (ENSCCRG00000073197)	ENSCCRG00000063934	ENSCCRG00000073468	cul1b (ENSCCRG00000060191)	ezh2 (ENSCCRG00000037596)	pdia4 (ENSCCRG00000037968)	spag6 (ENSCCRG00000064505)	bmi1a (ENSCCRG00000052926)	ENSCCRG00000054546	ENSCCRG00000070883	pip4k2aa (ENSCCRG00000077706)
Goldfish	MODERN SPECIES	43	slc35g2b (ENSCARG00000070223)	idi1 (ENSCARG00000070221)	wdr37 (ENSCARG00000070215)	ENSCARG00000070205	ENSCARG00000070203	ASAP1 (ENSCARG00000070188)	fam49bb (ENSCARG00000070170)	myca (ENSCARG00000070169)	ankha (ENSCARG00000070167)	ENSCARG00000070163	otulina (ENSCARG00000070164)	PREX2 (ENSCARG00000070132)	CPA6 (ENSCARG00000070106)	ARFGEF1 (ENSCARG00000069998)	CSPP1 (ENSCARG00000069942)	relch (ENSCARG00000069781) #22	ENSCARG00000069744	zgc:112332 (ENSCARG00000069732)	sec61g (ENSCARG00000069727)	tpk1 (ENSCARG00000069712)	CNTNAP2 (ENSCARG00000069395)	cul1b (ENSCARG00000069205)	ezh2 (ENSCARG00000069163)	pdia4 (ENSCARG00000069134)	spag6 (ENSCARG00000069120)	bmi1a (ENSCARG00000069102)	ENSCARG00000069092	ENSCARG00000068979	SKIDA1 (ENSCARG00000068962)	pip4k2aa (ENSCARG00000068904)	ENSCARG00000068889
Zebrafish	MODERN SPECIES	16	map3k22 (ENSDARG00000074219)	cry-dash (ENSDARG00000002396)	myd88 (ENSDARG00000010169)	oxsr1b (ENSDARG00000027500)	slc22a13b (ENSDARG00000059166)	LIMD2 (ENSDARG00000112015)	ENSDARG00000100303	csrnp1b (ENSDARG00000038429)	SLCO5A1 (ENSDARG00000071685)	sulf1 (ENSDARG00000038428)	C24H8orf34 (ENSDARG00000095034)	PREX2 (ENSDARG00000071692)	CPA6 (ENSDARG00000012013)	ARFGEF1 (ENSDARG00000063474)	CSPP1 (ENSDARG00000100236)	relch (ENSDARG00000101443) #22	ENSDARG00000087804	si:dkey-73n8.3 (ENSDARG00000089205)	zgc:112332 (ENSDARG00000058966)	sec61g (ENSDARG00000018637)	tpk1 (ENSDARG00000038040)	cntnap2a (ENSDARG00000058969)	cul1b (ENSDARG00000007691)	ezh2 (ENSDARG00000010571)	pdia4 (ENSDARG00000018491)	spag6 (ENSDARG00000020158)	bmi1a (ENSDARG00000006010)	commd3 (ENSDARG00000045402)	ENSDARG00000045401	pip4k2aa (ENSDARG00000003776)	ARMC3 (ENSDARG00000074708)
Euteleosteomorpha	ANCESTRAL SPECIES	147	ENSGT00390000000183	ENSGT00940000159419	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000156371.c.a.a.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT00940000164262	ENSGT00940000154516.a.a	ENSGT00940000154774	ENSGT00940000155013	ENSGT00940000157738	ENSGT00940000162104
Acanthomorphata	ANCESTRAL SPECIES	126	ENSGT00950000182913.A.b.b	ENSGT00940000159419	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000153451.a.b	ENSGT00940000157711	ENSGT00390000015971
Euacanthomorphacea	ANCESTRAL SPECIES	16	ENSGT00940000159419	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00500000044852.a.b	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Percomorphaceae	ANCESTRAL SPECIES	24	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Percomorphaceae_B	ANCESTRAL SPECIES	20	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Ovalentaria	ANCESTRAL SPECIES	21	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT00940000164262	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Atherinomorphae	ANCESTRAL SPECIES	19	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT00940000164262	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Cyprinodontiformes	ANCESTRAL SPECIES	20	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT00940000164262	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Aplocheiloidei	ANCESTRAL SPECIES	18											ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Mangrove rivulus	MODERN SPECIES	111										exoc3l4 (ENSKMAG00000016399)	ehd4 (ENSKMAG00000016382)	ZFHX4 (ENSKMAG00000016330)	pex2 (ENSKMAG00000016289)	hnf4g (ENSKMAG00000016217)	pign (ENSKMAG00000016146) #21	relch (ENSKMAG00000016103) #22	ENSKMAG00000016077	ENSKMAG00000016065	si:dkey-94e7.2 (ENSKMAG00000016038)	sec61g (ENSKMAG00000016021)	tpk1 (ENSKMAG00000015988)	CNTNAP2 (ENSKMAG00000015875)	ENSKMAG00000015810	c8g (ENSKMAG00000015787)	msrb2 (ENSKMAG00000015769)	pip4k2aa (ENSKMAG00000015725)	bmi1a (ENSKMAG00000015673)	COMMD3 (ENSKMAG00000015652)	MLLT10 (ENSKMAG00000015599)	SKIDA1 (ENSKMAG00000015584)	ENSKMAG00000015499
Turquoise killifish	MODERN SPECIES	1617	ENSNFUG00015017793	ENSNFUG00015017792	ENSNFUG00015017787	p2ry12 (ENSNFUG00015017784)	IGSF10 (ENSNFUG00015017779)	ENSNFUG00015017776	AMER2 (ENSNFUG00015017774)	ENSNFUG00015017771	ENSNFUG00015017767	ENSNFUG00015017763	ZFHX4 (ENSNFUG00015017761)	pex2 (ENSNFUG00015017759)	ENSNFUG00015017067	GPR141 (ENSNFUG00015017035)	PIGN (ENSNFUG00015016860) #21	KIAA1468 (ENSNFUG00015016154) #22	ENSNFUG00015016053	ENSNFUG00015016011	zgc:112332 (ENSNFUG00015016001)	sec61g (ENSNFUG00015015991)	ENSNFUG00015015985	TPK1 (ENSNFUG00015015948)	ENSNFUG00015015935	ENSNFUG00015015917	CNTNAP2 (ENSNFUG00015011520)	Nfu_g_1_011468 (ENSNFUG00015011184)	c8g (ENSNFUG00015011177)	MSRB2 (ENSNFUG00015011169)	ARMC3 (ENSNFUG00015011112)	pip4k2aa (ENSNFUG00015010641)	ENSNFUG00015010581
Cyprinodontoidei	ANCESTRAL SPECIES	25	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT00940000164262	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Poeciliinae	ANCESTRAL SPECIES	20	ENSGT00940000176931	ENSGT00940000159419	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT00940000164262	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Poecilia	ANCESTRAL SPECIES	17	ENSGT00940000176931	ENSGT00940000159419	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT00940000164262	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
NAME_6	ANCESTRAL SPECIES	86			ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT00940000164262	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Sailfin molly	MODERN SPECIES	420													hnf4g (ENSPLAG00000020605)	GPR141 (ENSPLAG00000000449)	pign (ENSPLAG00000020745) #21	relch (ENSPLAG00000020869) #22	ENSPLAG00000020877	ENSPLAG00000020925	si:dkey-94e7.2 (ENSPLAG00000020936)	sec61g (ENSPLAG00000020951)	tpk1 (ENSPLAG00000020974)
Amazon molly	MODERN SPECIES	274				dap (ENSPFOG00000009964)	ENSPFOG00000009900	ropn1l (ENSPFOG00000009878)	nup58 (ENSPFOG00000009727)	mtmr6 (ENSPFOG00000009407)	amer2 (ENSPFOG00000009395)	ENSPFOG00000009377	ZFHX4 (ENSPFOG00000009152)	pex2 (ENSPFOG00000020042)	hnf4g (ENSPFOG00000009018)	GPR141 (ENSPFOG00000020041)	pign (ENSPFOG00000008734) #21	relch (ENSPFOG00000008313) #22	ENSPFOG00000008289	ENSPFOG00000008164	zgc:112332 (ENSPFOG00000024140)	sec61g (ENSPFOG00000008159)	tpk1 (ENSPFOG00000008102)	ENSPFOG00000006983	cntnap2a (ENSPFOG00000006955)	zgc:153704 (ENSPFOG00000006868)	c8g (ENSPFOG00000006781)	msrb2 (ENSPFOG00000006729)	ARMC3 (ENSPFOG00000006521)	pip4k2aa (ENSPFOG00000006318)	spag6 (ENSPFOG00000006190)	bmi1a (ENSPFOG00000006111)	commd3 (ENSPFOG00000006040)
Guppy	MODERN SPECIES	451	zc2hc1a (ENSPREG00000016752)	ENSPREG00000016562	dap (ENSPREG00000016475)	ENSPREG00000016459	ropn1l (ENSPREG00000016444)	mtmr6 (ENSPREG00000016397)	amer2 (ENSPREG00000016375)	ENSPREG00000016368	nup58 (ENSPREG00000016310)	ZFHX4 (ENSPREG00000016234)	pex2 (ENSPREG00000016207)	hnf4g (ENSPREG00000016149)	GPR141 (ENSPREG00000016120)	pign (ENSPREG00000015881) #21	ENSPREG00000015816	relch (ENSPREG00000015521) #22	ENSPREG00000015436	ENSPREG00000015420	si:dkey-94e7.2 (ENSPREG00000015402)	sec61g (ENSPREG00000015377)	tpk1 (ENSPREG00000015337)	ENSPREG00000015314	CNTNAP2 (ENSPREG00000015278)	zgc:153704 (ENSPREG00000015251)	c8g (ENSPREG00000015223)	msrb2 (ENSPREG00000015209)	ARMC3 (ENSPREG00000015190)	pip4k2aa (ENSPREG00000015125)	spag6 (ENSPREG00000015090)	bmi1a (ENSPREG00000015050)	commd3 (ENSPREG00000015027)
Platyfish	MODERN SPECIES	13	ENSXMAG00000024029	ENSXMAG00000024141	ENSXMAG00000000824	dap (ENSXMAG00000000816)	ENSXMAG00000000794	ropn1l (ENSXMAG00000021825)	nup58 (ENSXMAG00000000717)	mtmr6 (ENSXMAG00000000703)	amer2 (ENSXMAG00000000702)	ENSXMAG00000023762	ZFHX4 (ENSXMAG00000000693)	pex2 (ENSXMAG00000023566)	hnf4g (ENSXMAG00000022197)	GPR141 (ENSXMAG00000020133)	pign (ENSXMAG00000000636) #21	relch (ENSXMAG00000000627) #22	ENSXMAG00000000624	ENSXMAG00000026762	si:dkey-94e7.2 (ENSXMAG00000000603)	sec61g (ENSXMAG00000021954)	tpk1 (ENSXMAG00000000597)	CNTNAP2 (ENSXMAG00000000572)	zgc:153704 (ENSXMAG00000000567)	c8g (ENSXMAG00000029361)	msrb2 (ENSXMAG00000000556)	ARMC3 (ENSXMAG00000000552)	pip4k2aa (ENSXMAG00000000549)	spag6 (ENSXMAG00000027592)	spag6 (ENSXMAG00000020914)	bmi1a (ENSXMAG00000007060)	commd3 (ENSXMAG00000007076)
NAME_4	ANCESTRAL SPECIES	31	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Sheepshead minnow	MODERN SPECIES	132	zc2hc1a (ENSCVAG00000003977)	ENSCVAG00000003963	ENSCVAG00000003958	dap (ENSCVAG00000003910)	ENSCVAG00000003904	ropn1l (ENSCVAG00000003892)	nup58 (ENSCVAG00000003877)	mtmr6 (ENSCVAG00000003857)	amer2 (ENSCVAG00000003843)	ENSCVAG00000003831	ZFHX4 (ENSCVAG00000003822)	pex2 (ENSCVAG00000003788)	hnf4g (ENSCVAG00000003783)	GPR141 (ENSCVAG00000003742)	pign (ENSCVAG00000003731) #21	relch (ENSCVAG00000003688) #22	ENSCVAG00000003506	ENSCVAG00000003496	si:dkey-94e7.2 (ENSCVAG00000003491)	sec61g (ENSCVAG00000003475)	tpk1 (ENSCVAG00000003439)	ENSCVAG00000003416
Mummichog	MODERN SPECIES	2207	ENSFHEG00000004053	ENSFHEG00000004048	ENSFHEG00000004027	dap (ENSFHEG00000004005)	ANKRD33B (ENSFHEG00000003998)	ropn1l (ENSFHEG00000003992)	nup58 (ENSFHEG00000003977)	mtmr6 (ENSFHEG00000003968)	amer2 (ENSFHEG00000003943)	ENSFHEG00000003923	ZFHX4 (ENSFHEG00000003914)	pex2 (ENSFHEG00000003877)	ENSFHEG00000003870	GPR141 (ENSFHEG00000003846)	pign (ENSFHEG00000003836) #21	relch (ENSFHEG00000003815) #22	ENSFHEG00000003716	ENSFHEG00000003711	si:dkey-94e7.2 (ENSFHEG00000003706)	tpk1 (ENSFHEG00000003691)	sec61g (ENSFHEG00000003678)	CNTNAP2 (ENSFHEG00000003657)	ENSFHEG00000003617	msrb2 (ENSFHEG00000003594)	ARMC3 (ENSFHEG00000003578)	pip4k2aa (ENSFHEG00000003537)	spag6 (ENSFHEG00000003508)
Oryzias	ANCESTRAL SPECIES	18	ENSGT01090000261011	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711	ENSGT00940000153451.a.b
Oryzias_b	ANCESTRAL SPECIES	16	ENSGT01090000261011	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711	ENSGT00940000153451.a.b
Javanese ricefish	MODERN SPECIES	12	zc2hc1a (ENSOJAG00000009005)	ENSOJAG00000008994	ENSOJAG00000008986	ENSOJAG00000008821	dap (ENSOJAG00000008769)	ENSOJAG00000008755	ropn1l (ENSOJAG00000008746)	nup58 (ENSOJAG00000008543)	mtmr6 (ENSOJAG00000007383)	amer2 (ENSOJAG00000007257)	ZFHX4 (ENSOJAG00000007190)	pex2 (ENSOJAG00000007184)	hnf4g (ENSOJAG00000007139)	GPR141 (ENSOJAG00000007114)	pign (ENSOJAG00000006664) #21	relch (ENSOJAG00000004490) #22	ENSOJAG00000004099	ENSOJAG00000004074	si:dkey-94e7.2 (ENSOJAG00000004011)	sec61g (ENSOJAG00000003992)	tpk1 (ENSOJAG00000003643)	ENSOJAG00000023814	ENSOJAG00000023811	CNTNAP2 (ENSOJAG00000023738)	ENSOJAG00000023688	c8g (ENSOJAG00000023687)	msrb2 (ENSOJAG00000023686)	pip4k2aa (ENSOJAG00000023681)	spag6 (ENSOJAG00000023673)	bmi1a (ENSOJAG00000023664)	commd3 (ENSOJAG00000023658)
Indian medaka	MODERN SPECIES	14	ENSOMEG00000015091	zc2hc1a (ENSOMEG00000015075)	ENSOMEG00000015041	ENSOMEG00000014968	dap (ENSOMEG00000014753)	ANKRD33B (ENSOMEG00000014741)	ropn1l (ENSOMEG00000000707)	nup58 (ENSOMEG00000014681)	mtmr6 (ENSOMEG00000014588)	amer2 (ENSOMEG00000014500)	ZFHX4 (ENSOMEG00000014431)	pex2 (ENSOMEG00000014328)	hnf4g (ENSOMEG00000014318)	GPR141 (ENSOMEG00000014268)	pign (ENSOMEG00000014248) #21	relch (ENSOMEG00000014184) #22	ENSOMEG00000014014	ENSOMEG00000013987	si:dkey-94e7.2 (ENSOMEG00000013958)	sec61g (ENSOMEG00000013910)	tpk1 (ENSOMEG00000013935)	CNTNAP2 (ENSOMEG00000013837)	ENSOMEG00000013648	zgc:153704 (ENSOMEG00000013639)	c8g (ENSOMEG00000013614)	msrb2 (ENSOMEG00000013586)	pip4k2aa (ENSOMEG00000013546)	ENSOMEG00000013492	spag6 (ENSOMEG00000013447)	BMI1 (ENSOMEG00000000908)	commd3 (ENSOMEG00000013350)
Oryzias_a	ANCESTRAL SPECIES	16	ENSGT01090000261011	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711	ENSGT00940000153451.a.b
Japanese Medaka HdrR	MODERN SPECIES	12	zc2hc1a (ENSORLG00000006796)	ENSORLG00000028174	ENSORLG00000026822	ENSORLG00000006828	dap (ENSORLG00000027748)	ENSORLG00000006844	ropn1l (ENSORLG00000024461)	nup58 (ENSORLG00000006885)	mtmr6 (ENSORLG00000006906)	amer2 (ENSORLG00000006914)	ZFHX4 (ENSORLG00000006928)	pex2 (ENSORLG00000030021)	hnf4g (ENSORLG00000006996)	GPR141 (ENSORLG00000007000)	pign (ENSORLG00000007013) #21	relch (ENSORLG00000007060) #22	ENSORLG00000025642	ENSORLG00000007074	zgc:112332 (ENSORLG00000023234)	sec61g (ENSORLG00000025763)	tpk1 (ENSORLG00000027264)	CNTNAP2 (ENSORLG00000007122)	zgc:153704 (ENSORLG00000007143)	c8g (ENSORLG00000007153)	msrb2 (ENSORLG00000007160)	pip4k2aa (ENSORLG00000007181)	spag6 (ENSORLG00000007203)	bmi1a (ENSORLG00000007215)	commd3 (ENSORLG00000007220)	MLLT10 (ENSORLG00000007237)	SKIDA1 (ENSORLG00000007246)
Chinese medaka	MODERN SPECIES	1041														hnf4g (ENSOSIG00000021564)	pign (ENSOSIG00000020433) #21	relch (ENSOSIG00000019976) #22	ENSOSIG00000019869	si:dkey-94e7.2 (ENSOSIG00000019867)	sec61g (ENSOSIG00000019864)	tpk1 (ENSOSIG00000019862)	CNTNAP2 (ENSOSIG00000019748)	zgc:153704 (ENSOSIG00000019717)	c8g (ENSOSIG00000019713)	msrb2 (ENSOSIG00000019710)	pip4k2aa (ENSOSIG00000019477)	spag6 (ENSOSIG00000019452)	bmi1a (ENSOSIG00000019443)	commd3 (ENSOSIG00000019429)	MLLT10 (ENSOSIG00000019410)	ENSOSIG00000019388	pdia4 (ENSOSIG00000019308)
Ovalentaria_B	ANCESTRAL SPECIES	20	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Pomacentridae	ANCESTRAL SPECIES	11	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042.c	ENSGT00390000015971	ENSGT00940000157711
Pomacentridae_A	ANCESTRAL SPECIES	8	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042.c	ENSGT00390000015971	ENSGT00940000157711
Amphiprion	ANCESTRAL SPECIES	7	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a.a.a	ENSGT00940000155244.c.c.a.a.b.a	ENSGT00940000155244.c.c.a.b.a	ENSGT00940000155244.c.c.a.a.b.b.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042.c	ENSGT00390000015971	ENSGT00940000157711
Clown anemonefish	MODERN SPECIES	622										ENSAOCG00000002073	ZFHX4 (ENSAOCG00000010470)	pex2 (ENSAOCG00000010513)	ENSAOCG00000010543	GPR141 (ENSAOCG00000010563)	pign (ENSAOCG00000002819) #21	relch (ENSAOCG00000010989) #22	ENSAOCG00000011001	ENSAOCG00000011026	si:dkey-94e7.2 (ENSAOCG00000011029)	sec61g (ENSAOCG00000011083)	tpk1 (ENSAOCG00000011100)
Orange clownfish	MODERN SPECIES	14	ENSAPEG00000001212	dap (ENSAPEG00000001172)	ENSAPEG00000001167	ropn1l (ENSAPEG00000001146)	nup58 (ENSAPEG00000001054)	mtmr6 (ENSAPEG00000000996)	amer2 (ENSAPEG00000024284)	ENSAPEG00000024277	ENSAPEG00000024269	ENSAPEG00000024261	ZFHX4 (ENSAPEG00000024228)	pex2 (ENSAPEG00000024201)	hnf4g (ENSAPEG00000024191)	GPR141 (ENSAPEG00000024181)	pign (ENSAPEG00000024166) #21	relch (ENSAPEG00000023991) #22	ENSAPEG00000023953	ENSAPEG00000023937	si:dkey-94e7.2 (ENSAPEG00000023931)	sec61g (ENSAPEG00000023883)	tpk1 (ENSAPEG00000023875)	CNTNAP2 (ENSAPEG00000023836)	ENSAPEG00000023792	c8g (ENSAPEG00000023777)	msrb2 (ENSAPEG00000023767)	ARMC3 (ENSAPEG00000023755)	pip4k2aa (ENSAPEG00000023726)	spag6 (ENSAPEG00000023707)	bmi1a (ENSAPEG00000023692)	commd3 (ENSAPEG00000023667)	MLLT10 (ENSAPEG00000023591)
Spiny chromis	MODERN SPECIES	164											ZFHX4 (ENSAPOG00000018287)	pex2 (ENSAPOG00000018294)	ENSAPOG00000018313	GPR141 (ENSAPOG00000018342)	pign (ENSAPOG00000018354) #21	relch (ENSAPOG00000018587) #22	ENSAPOG00000018628	ENSAPOG00000018665	si:dkey-94e7.2 (ENSAPOG00000018675)	sec61g (ENSAPOG00000018771)	tpk1 (ENSAPOG00000018783)
Bicolor damselfish	DUPLICATION
Bicolor damselfish	MODERN SPECIES	82																relch (ENSSPAG00000018173) #22	ENSSPAG00000018224	ENSSPAG00000018232	si:dkey-94e7.2 (ENSSPAG00000018253)
Bicolor damselfish	MODERN SPECIES	304	zc2hc1a (ENSSPAG00000003956)	ENSSPAG00000003947	ENSSPAG00000003815	dap (ENSSPAG00000003785)	ENSSPAG00000003772	ropn1l (ENSSPAG00000003717)	nup58 (ENSSPAG00000003554)	mtmr6 (ENSSPAG00000003518)	amer2 (ENSSPAG00000003492)	ENSSPAG00000003488	ZFHX4 (ENSSPAG00000003479)	pex2 (ENSSPAG00000003476)	hnf4g (ENSSPAG00000003442)	GPR141 (ENSSPAG00000003426)	pign (ENSSPAG00000003287) #21	relch (ENSSPAG00000003222) #22
Cichlidae	ANCESTRAL SPECIES	18	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Pseudocrenilabrinae	ANCESTRAL SPECIES	20	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	19	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Haplochromini	ANCESTRAL SPECIES	21	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a.k.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Haplochromini_A	ANCESTRAL SPECIES	21	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a.k.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Haplochromini_B	ANCESTRAL SPECIES	18	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a.k.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Eastern happy	MODERN SPECIES	21	zc2hc1a (ENSACLG00000020506)	ENSACLG00000020540	ENSACLG00000020581	dap (ENSACLG00000020703)	ENSACLG00000020709	ropn1l (ENSACLG00000020737)	nup58 (ENSACLG00000020782)	mtmr6 (ENSACLG00000020846)	amer2 (ENSACLG00000020872)	ENSACLG00000020877	ZFHX4 (ENSACLG00000020930)	pex2 (ENSACLG00000021002)	hnf4g (ENSACLG00000021012)	pign (ENSACLG00000021044) #21	GPR141 (ENSACLG00000021262)	relch (ENSACLG00000021282) #22	ENSACLG00000021407	ENSACLG00000021432	si:dkey-94e7.2 (ENSACLG00000021446)	tpk1 (ENSACLG00000021478)	sec61g (ENSACLG00000021524)	CNTNAP2 (ENSACLG00000021645)	ENSACLG00000021836	c8g (ENSACLG00000021875)	msrb2 (ENSACLG00000021903)	ARMC3 (ENSACLG00000021918)	pip4k2aa (ENSACLG00000022003)	spag6 (ENSACLG00000022044)	bmi1a (ENSACLG00000022098)	commd3 (ENSACLG00000022174)	MLLT10 (ENSACLG00000022237)
Zebra mbuna	MODERN SPECIES	18			ENSMZEG00005021889	dap (ENSMZEG00005021893)	ANKRD33B (ENSMZEG00005021897)	ropn1l (ENSMZEG00005021901)	nup58 (ENSMZEG00005021904)	mtmr6 (ENSMZEG00005021912)	amer2 (ENSMZEG00005021920)	ENSMZEG00005021924	ZFHX4 (ENSMZEG00005021931)	pex2 (ENSMZEG00005021938)	hnf4g (ENSMZEG00005021940)	pign (ENSMZEG00005021945) #21	GPR141 (ENSMZEG00005021951)	relch (ENSMZEG00005021953) #22	ENSMZEG00005021956	ENSMZEG00005021959	sec61g (ENSMZEG00005021964)	tpk1 (ENSMZEG00005021962)
P. nyererei	MODERN SPECIES	302	ENSPNYG00000021808	ENSPNYG00000021815	ENSPNYG00000021888	dap (ENSPNYG00000022084)	ANKRD33B (ENSPNYG00000022094)	ropn1l (ENSPNYG00000022099)	nup58 (ENSPNYG00000022109)	mtmr6 (ENSPNYG00000022119)	amer2 (ENSPNYG00000022143)	ENSPNYG00000022158	ZFHX4 (ENSPNYG00000022176)	pex2 (ENSPNYG00000022187)	hnf4g (ENSPNYG00000022197)	GPR141 (ENSPNYG00000022208)	pign (ENSPNYG00000022223) #21	relch (ENSPNYG00000022256) #22	ENSPNYG00000022312	si:dkey-94e7.2 (ENSPNYG00000022371)	sec61g (ENSPNYG00000022386)	tpk1 (ENSPNYG00000022377)	CNTNAP2 (ENSPNYG00000022397)	ENSPNYG00000022413	ENSPNYG00000022417	c8g (ENSPNYG00000022426)	msrb2 (ENSPNYG00000022438)	ARMC3 (ENSPNYG00000022447)	pip4k2aa (ENSPNYG00000022460)	spag6 (ENSPNYG00000022463)	bmi1a (ENSPNYG00000022471)	commd3 (ENSPNYG00000022488)	ENSPNYG00000022500
Burton s mouthbrooder	MODERN SPECIES	270	zc2hc1a (ENSHBUG00000023753)	ENSHBUG00000023738	ENSHBUG00000023721	dap (ENSHBUG00000023591)	ENSHBUG00000023582	ropn1l (ENSHBUG00000023573)	nup58 (ENSHBUG00000023542)	mtmr6 (ENSHBUG00000023505)	amer2 (ENSHBUG00000023486)	ENSHBUG00000023434	ZFHX4 (ENSHBUG00000023412)	pex2 (ENSHBUG00000023277)	hnf4g (ENSHBUG00000023255)	GPR141 (ENSHBUG00000023197)	pign (ENSHBUG00000023177) #21	relch (ENSHBUG00000023099) #22	ENSHBUG00000023014	si:dkey-94e7.2 (ENSHBUG00000023006)	sec61g (ENSHBUG00000022931)	tpk1 (ENSHBUG00000022989)	CNTNAP2 (ENSHBUG00000022907)	zgc:153704 (ENSHBUG00000022682)	c8g (ENSHBUG00000022651)	msrb2 (ENSHBUG00000022631)	ARMC3 (ENSHBUG00000022587)	pip4k2aa (ENSHBUG00000022553)	spag6 (ENSHBUG00000022526)	bmi1a (ENSHBUG00000022485)	commd3 (ENSHBUG00000022447)	MLLT10 (ENSHBUG00000022422)	SKIDA1 (ENSHBUG00000022385)
Lyretail cichlid	MODERN SPECIES	323	ENSNBRG00000005075	ENSNBRG00000005012	dap (ENSNBRG00000004999)	ENSNBRG00000004968	ropn1l (ENSNBRG00000004942)	nup58 (ENSNBRG00000004674)	mtmr6 (ENSNBRG00000004593)	amer2 (ENSNBRG00000004554)	ENSNBRG00000004536	ENSNBRG00000004512	ZFHX4 (ENSNBRG00000004502)	pex2 (ENSNBRG00000004496)	ENSNBRG00000004467	ENSNBRG00000004462	pign (ENSNBRG00000004168) #21	relch (ENSNBRG00000003704) #22	ENSNBRG00000003670	ENSNBRG00000003651	ENSNBRG00000003411	sec61g (ENSNBRG00000003370)	tpk1 (ENSNBRG00000003356)	CNTNAP2 (ENSNBRG00000003285)	zgc:153704 (ENSNBRG00000003264)	c8g (ENSNBRG00000003242)	msrb2 (ENSNBRG00000003239)	ARMC3 (ENSNBRG00000003178)	pip4k2aa (ENSNBRG00000002952)	spag6 (ENSNBRG00000002889)	bmi1a (ENSNBRG00000002838)	commd3 (ENSNBRG00000002820)	ENSNBRG00000002811
Nile tilapia	MODERN SPECIES	21	ENSONIG00000031968	zc2hc1a (ENSONIG00000014514)	ENSONIG00000031713	ENSONIG00000014510	dap (ENSONIG00000027304)	ANKRD33B (ENSONIG00000014509)	ropn1l (ENSONIG00000014506)	nup58 (ENSONIG00000014503)	ENSONIG00000014496	mtmr6 (ENSONIG00000014498)	ZFHX4 (ENSONIG00000014495)	pex2 (ENSONIG00000029164)	hnf4g (ENSONIG00000014490)	GPR141 (ENSONIG00000020423)	pign (ENSONIG00000014489) #21	relch (ENSONIG00000014484) #22	ENSONIG00000014483	ENSONIG00000014482	si:dkey-94e7.2 (ENSONIG00000014478)	sec61g (ENSONIG00000040902)	tpk1 (ENSONIG00000014476)	CNTNAP2 (ENSONIG00000014457)	zgc:153704 (ENSONIG00000014454)	c8g (ENSONIG00000014453)	msrb2 (ENSONIG00000014452)	ARMC3 (ENSONIG00000014450)	pip4k2aa (ENSONIG00000038241)	spag6 (ENSONIG00000014439)	bmi1a (ENSONIG00000014436)	commd3 (ENSONIG00000014434)	MLLT10 (ENSONIG00000014431)
Midas cichlid	MODERN SPECIES	592	zc2hc1a (ENSACIG00000003278)	ENSACIG00000003268	ENSACIG00000003222	dap (ENSACIG00000003212)	ENSACIG00000003196	ropn1l (ENSACIG00000003150)	nup58 (ENSACIG00000002972)	mtmr6 (ENSACIG00000002916)	amer2 (ENSACIG00000002901)	ENSACIG00000002837	ZFHX4 (ENSACIG00000002805)	pex2 (ENSACIG00000002786)	ENSACIG00000002759	GPR141 (ENSACIG00000002754)	pign (ENSACIG00000001831) #21	relch (ENSACIG00000001405) #22	ENSACIG00000001379	ENSACIG00000001249	si:dkey-94e7.2 (ENSACIG00000001221)	sec61g (ENSACIG00000001166)	tpk1 (ENSACIG00000000995)	ENSACIG00000000978	ENSACIG00000000959	CNTNAP2 (ENSACIG00000000896)	zgc:153704 (ENSACIG00000000867)	c8g (ENSACIG00000000852)	msrb2 (ENSACIG00000000778)	ARMC3 (ENSACIG00000000728)	pip4k2aa (ENSACIG00000000710)	spag6 (ENSACIG00000000677)	bmi1a (ENSACIG00000000646)
Percomorphaceae_C	ANCESTRAL SPECIES	21	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Eupercaria	ANCESTRAL SPECIES	20	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Tetraodontidae	ANCESTRAL SPECIES	18	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.d.a	ENSGT00940000155244.c.d.b	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099.v	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Fugu	MODERN SPECIES	1	ENSTRUG00000020664	ropn1l (ENSTRUG00000001772)	nup58 (ENSTRUG00000001476)	mtmr6 (ENSTRUG00000001228)	amer2 (ENSTRUG00000001197)	ENSTRUG00000001100	ENSTRUG00000027564	ENSTRUG00000024085	ENSTRUG00000030683	ENSTRUG00000003624	ZFHX4 (ENSTRUG00000000173)	pex2 (ENSTRUG00000000192)	hnf4g (ENSTRUG00000000198)	ENSTRUG00000031146	pign (ENSTRUG00000000236) #21	relch (ENSTRUG00000000253) #22	ENSTRUG00000025891	ENSTRUG00000020396	zgc:112332 (ENSTRUG00000000359)	sec61g (ENSTRUG00000000427)	tpk1 (ENSTRUG00000025736)	zgc:153704 (ENSTRUG00000001588)	c8g (ENSTRUG00000023195)	CNTNAP2 (ENSTRUG00000001048)	msrb2 (ENSTRUG00000001796)	ARMC3 (ENSTRUG00000001807)	pip4k2aa (ENSTRUG00000029607)	bmi1a (ENSTRUG00000004011)	commd3 (ENSTRUG00000004454)	MLLT10 (ENSTRUG00000004738)	SKIDA1 (ENSTRUG00000027456)
Tetraodon	MODERN SPECIES	21	ropn1l (ENSTNIG00000001390)	nup58 (ENSTNIG00000005743)	mtmr6 (ENSTNIG00000005742)	amer2 (ENSTNIG00000005741)	ENSTNIG00000000270	ENSTNIG00000000832	ENSTNIG00000005740	ENSTNIG00000004328	ZFHX4 (ENSTNIG00000008122)	pex2 (ENSTNIG00000008123)	alg1 (ENSTNIG00000008124)	eef2kmt (ENSTNIG00000008125)	hnf4g (ENSTNIG00000008126)	GPR141 (ENSTNIG00000008127)	pign (ENSTNIG00000008128) #21	relch (ENSTNIG00000008129) #22	ENSTNIG00000008130	sec61g (ENSTNIG00000000054)	ENSTNIG00000008132	ENSTNIG00000008133	CNTNAP2 (ENSTNIG00000008134)	ENSTNIG00000008135	c8g (ENSTNIG00000008136)	msrb2 (ENSTNIG00000008137)	ARMC3 (ENSTNIG00000008138)	pip4k2aa (ENSTNIG00000008139)	ENSTNIG00000001631	spag6 (ENSTNIG00000008140)	bmi1a (ENSTNIG00000008141)	commd3 (ENSTNIG00000008142)	MLLT10 (ENSTNIG00000008143)
Eupecaria_A	ANCESTRAL SPECIES	19	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Ballan wrasse	MODERN SPECIES	37													hnf4g (ENSLBEG00000007116)	ENSLBEG00000007091	pign (ENSLBEG00000006949) #21	relch (ENSLBEG00000006691) #22	ENSLBEG00000006632	ENSLBEG00000006609	ENSLBEG00000006591	si:dkey-94e7.2 (ENSLBEG00000006563)	sec61g (ENSLBEG00000006531)	tpk1 (ENSLBEG00000006460)	CNTNAP2 (ENSLBEG00000006295)	srd5a2a (ENSLBEG00000006255)	ENSLBEG00000006236	bambia (ENSLBEG00000006218)	waca (ENSLBEG00000006197)	mpp7a (ENSLBEG00000006090)	ODAD2 (ENSLBEG00000005985)	mkxa (ENSLBEG00000005924)	rab18a (ENSLBEG00000005861)
Eupecaria_B	ANCESTRAL SPECIES	19	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.l	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Eupecaria_C	ANCESTRAL SPECIES	19	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	17	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000157711
Large yellow croaker	MODERN SPECIES	494	dap (ENSLCRG00005019667)	ENSLCRG00005019666	ENSLCRG00005019665	ropn1l (ENSLCRG00005019664)	nup58 (ENSLCRG00005019634)	mtmr6 (ENSLCRG00005017982)	amer2 (ENSLCRG00005017928)	ENSLCRG00005017926	ENSLCRG00005017924	ZFHX4 (ENSLCRG00005017922)	pex2 (ENSLCRG00005017921)	ENSLCRG00005017917	hnf4g (ENSLCRG00005017913)	ENSLCRG00005017909	pign (ENSLCRG00005017889) #21	relch (ENSLCRG00005017047) #22	ENSLCRG00005017025	si:dkey-94e7.2 (ENSLCRG00005017024)	sec61g (ENSLCRG00005017023)	tpk1 (ENSLCRG00005017022)	CNTNAP2 (ENSLCRG00005015462)	ENSLCRG00005015451	c8g (ENSLCRG00005015450)	msrb2 (ENSLCRG00005015449)	ARMC3 (ENSLCRG00005015431)	pip4k2aa (ENSLCRG00005015114)	spag6 (ENSLCRG00005015104)	bmi1a (ENSLCRG00005015096)	commd3 (ENSLCRG00005015095)	MLLT10 (ENSLCRG00005015091)	SKIDA1 (ENSLCRG00005015088)
European seabass	MODERN SPECIES	8	ENSDLAG00005007526	ENSDLAG00005007577	zc2hc1a (ENSDLAG00005007584)	ENSDLAG00005032265	ENSDLAG00005007623	DAP1 (ENSDLAG00005027161)	ANKRD33B (ENSDLAG00005007851)	nup58 (ENSDLAG00005007867)	ENSDLAG00005007956	amer2 (ENSDLAG00005032002)	B4GALT1 (ENSDLAG00005035086)	ENSDLAG00005009009	pex2 (ENSDLAG00005009027)	ENSDLAG00005009042	PIGN (ENSDLAG00005009146) #21	relch (ENSDLAG00005009336) #22	ENSDLAG00005014015	ENSDLAG00005014036	SEC61G (ENSDLAG00005035120)	tpk1 (ENSDLAG00005014047)	ENSDLAG00005014108	ENSDLAG00005015872	ARMC3 (ENSDLAG00005015914)	PIP4K2A (ENSDLAG00005027248)	spag6 (ENSDLAG00005016597)	BMI1 (ENSDLAG00005016637)	MLLT10 (ENSDLAG00005016695)	SKIDA1 (ENSDLAG00005016749)	PDIA4 (ENSDLAG00005030930)	ENSDLAG00005016825	GPT2L (ENSDLAG00005016938)
Gilthead seabream	MODERN SPECIES	10	ENSSAUG00010012568	ENSSAUG00010012569	ENSSAUG00010012576	dap (ENSSAUG00010012802)	ENSSAUG00010012803	ropn1l (ENSSAUG00010012805)	nup58 (ENSSAUG00010012813)	mtmr6 (ENSSAUG00010012965)	amer2 (ENSSAUG00010015534)	ENSSAUG00010015537	ZFHX4 (ENSSAUG00010002771)	pex2 (ENSSAUG00010002775)	hnf4g (ENSSAUG00010002798)	GPR141 (ENSSAUG00010002955)	pign (ENSSAUG00010002976) #21	relch (ENSSAUG00010003343) #22	ENSSAUG00010013252	ENSSAUG00010013255	si:dkey-94e7.2 (ENSSAUG00010013256)	sec61g (ENSSAUG00010013257)	tpk1 (ENSSAUG00010013258)	CNTNAP2 (ENSSAUG00010013278)	ENSSAUG00010015198	c8g (ENSSAUG00010015199)	msrb2 (ENSSAUG00010015200)	ARMC3 (ENSSAUG00010015201)	pip4k2aa (ENSSAUG00010015204)	spag6 (ENSSAUG00010015359)	bmi1a (ENSSAUG00010015363)	commd3 (ENSSAUG00010015364)	MLLT10 (ENSSAUG00010015366)
Perciformes	ANCESTRAL SPECIES	21	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.l	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Perciformes_a	ANCESTRAL SPECIES	22	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.l	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Pike perch	MODERN SPECIES	58													hnf4g (ENSSLUG00000006769)	GPR141 (ENSSLUG00000006745)	pign (ENSSLUG00000006607) #21	relch (ENSSLUG00000002691) #22	ENSSLUG00000002491	ENSSLUG00000002472	si:dkey-94e7.2 (ENSSLUG00000002456)	sec61g (ENSSLUG00000002450)	tpk1 (ENSSLUG00000002443)	ENSSLUG00000002438	CNTNAP2 (ENSSLUG00000002303)	ENSSLUG00000002248	c8g (ENSSLUG00000002236)	msrb2 (ENSSLUG00000002231)	ARMC3 (ENSSLUG00000001919)	pip4k2aa (ENSSLUG00000001601)	spag6 (ENSSLUG00000020917)	bmi1a (ENSSLUG00000020892)	commd3 (ENSSLUG00000020885)
Channel bull blenny	MODERN SPECIES	12	zc2hc1a (ENSCGOG00000003973)	ENSCGOG00000003969	ENSCGOG00000003777	dap (ENSCGOG00000003772)	ANKRD33B (ENSCGOG00000003771)	ENSCGOG00000003769	nup58 (ENSCGOG00000003760)	mtmr6 (ENSCGOG00000002791)	amer2 (ENSCGOG00000002594)	ENSCGOG00000002588	ZFHX4 (ENSCGOG00000022909)	pex2 (ENSCGOG00000022908)	hnf4g (ENSCGOG00000022899)	GPR141 (ENSCGOG00000022897)	pign (ENSCGOG00000022250) #21	relch (ENSCGOG00000021306) #22	ENSCGOG00000021270	ENSCGOG00000021227	si:dkey-94e7.2 (ENSCGOG00000021217)	sec61g (ENSCGOG00000021216)	tpk1 (ENSCGOG00000021213)	ENSCGOG00000021211	CNTNAP2 (ENSCGOG00000020543)	ENSCGOG00000020509	c8g (ENSCGOG00000020506)	msrb2 (ENSCGOG00000020504)	ARMC3 (ENSCGOG00000020487)	pip4k2aa (ENSCGOG00000019096)	spag6 (ENSCGOG00000018965)	bmi1a (ENSCGOG00000018947)	commd3 (ENSCGOG00000018943)
Cottioidei	ANCESTRAL SPECIES	21	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.l	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Stickleback	MODERN SPECIES	20	ENSGACG00000002395	ropn1l (ENSGACG00000002399)	ENSGACG00000002400	ropn1l (ENSGACG00000002402)	ENSGACG00000002404	ENSGACG00000002405	nup58 (ENSGACG00000002406)	mtmr6 (ENSGACG00000002411)	amer2 (ENSGACG00000002415)	ENSGACG00000002416	ZFHX4 (ENSGACG00000002418)	pex2 (ENSGACG00000002421)	hnf4g (ENSGACG00000002422)	GPR141 (ENSGACG00000002425)	pign (ENSGACG00000002426) #21	relch (ENSGACG00000002435) #22	ENSGACG00000002443	ENSGACG00000002444	si:dkey-94e7.2 (ENSGACG00000002448)	tpk1 (ENSGACG00000002460)	CNTNAP2 (ENSGACG00000002461)	ENSGACG00000002466	ENSGACG00000002469	ENSGACG00000002473	ENSGACG00000002475	c8g (ENSGACG00000002477)	msrb2 (ENSGACG00000002478)	ARMC3 (ENSGACG00000002485)	pip4k2aa (ENSGACG00000002491)	spag6 (ENSGACG00000002493)	bmi1a (ENSGACG00000002494)
Lumpfish	MODERN SPECIES	12	zc2hc1a (ENSCLMG00005008902)	ENSCLMG00005008901	ENSCLMG00005008900	dap (ENSCLMG00005008899)	ENSCLMG00005008895	ropn1l (ENSCLMG00005008839)	nup58 (ENSCLMG00005020146)	mtmr6 (ENSCLMG00005019079)	amer2 (ENSCLMG00005019060)	ENSCLMG00005019058	ZFHX4 (ENSCLMG00005019056)	pex2 (ENSCLMG00005019053)	hnf4g (ENSCLMG00005018818)	GPR141 (ENSCLMG00005018809)	pign (ENSCLMG00005016644) #21	relch (ENSCLMG00005016316) #22	ENSCLMG00005016312	ENSCLMG00005016311	si:dkey-94e7.2 (ENSCLMG00005015787)	sec61g (ENSCLMG00005015772)	tpk1 (ENSCLMG00005015766)	ENSCLMG00005015759	CNTNAP2 (ENSCLMG00005015737)	ENSCLMG00005015732	c8g (ENSCLMG00005015729)	msrb2 (ENSCLMG00005015726)	ARMC3 (ENSCLMG00005015721)	pip4k2aa (ENSCLMG00005015601)	spag6 (ENSCLMG00005015599)	bmi1a (ENSCLMG00005015598)	commd3 (ENSCLMG00005015595)
Percomorphaceae_D	ANCESTRAL SPECIES	21	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Anabantaria	ANCESTRAL SPECIES	22	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Anabantoidei	ANCESTRAL SPECIES	20	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Climbing perch	MODERN SPECIES	11	zc2hc1a (ENSATEG00000016490)	ENSATEG00000016471	ENSATEG00000016201	dap (ENSATEG00000029672)	ENSATEG00000029773	ropn1l (ENSATEG00000016116)	nup58 (ENSATEG00000016068)	ENSATEG00000016040	amer2 (ENSATEG00000026103)	ENSATEG00000016022	ENSATEG00000015997	ENSATEG00000015987	ENSATEG00000015966	ENSATEG00000015940	PIGN (ENSATEG00000015881) #21	relch (ENSATEG00000015806) #22	ENSATEG00000015774	ENSATEG00000015750	zgc:112332 (ENSATEG00000015736)	sec61g (ENSATEG00000015685)	tpk1 (ENSATEG00000027055)	ENSATEG00000015640	ENSATEG00000015557	ENSATEG00000028715	ENSATEG00000026065	ENSATEG00000029707	c8g (ENSATEG00000015398)	msrb2 (ENSATEG00000027878)	ARMC3 (ENSATEG00000015271)	pip4k2aa (ENSATEG00000015222)	spag6 (ENSATEG00000015121)
Siamese fighting fish	MODERN SPECIES	15	zgc:153704 (ENSBSLG00000016220)	ENSBSLG00000016219	ENSBSLG00000016190	CNTNAP2 (ENSBSLG00000014260)	tpk1 (ENSBSLG00000014071)	sec61g (ENSBSLG00000013851)	si:dkey-94e7.2 (ENSBSLG00000013843)	mtmr6 (ENSBSLG00000013337)	amer2 (ENSBSLG00000013148)	ENSBSLG00000013122	ZFHX4 (ENSBSLG00000013058)	pex2 (ENSBSLG00000012887)	hnf4g (ENSBSLG00000012812)	ENSBSLG00000012808	pign (ENSBSLG00000012675) #21	relch (ENSBSLG00000009203) #22	ENSBSLG00000008752	ENSBSLG00000008735	nup58 (ENSBSLG00000008638)	ropn1l (ENSBSLG00000008619)	ANKRD33B (ENSBSLG00000008611)	dap (ENSBSLG00000008606)	ENSBSLG00000007918	ENSBSLG00000007608	zc2hc1a (ENSBSLG00000007579)	bco1 (ENSBSLG00000007566)	TLCD4 (ENSBSLG00000007562)	ENSBSLG00000007470	PLCXD2 (ENSBSLG00000007419)	mak (ENSBSLG00000007397)	tmem14ca (ENSBSLG00000007386)
Zig-zag eel	MODERN SPECIES	12	ENSMAMG00000022109	ENSMAMG00000022116	dap (ENSMAMG00000025272)	ENSMAMG00000022123	ropn1l (ENSMAMG00000022125)	nup58 (ENSMAMG00000022131)	ENSMAMG00000022138	amer2 (ENSMAMG00000022143)	ENSMAMG00000022158	ENSMAMG00000022166	ENSMAMG00000022174	ENSMAMG00000028154	ENSMAMG00000022203	ENSMAMG00000022844	PIGN (ENSMAMG00000022846) #21	relch (ENSMAMG00000022855) #22	ENSMAMG00000022872	ENSMAMG00000022876	zgc:112332 (ENSMAMG00000022875)	sec61g (ENSMAMG00000022880)	tpk1 (ENSMAMG00000028295)	ENSMAMG00000022883	ENSMAMG00000022886	c8g (ENSMAMG00000022888)	msrb2 (ENSMAMG00000022889)	ARMC3 (ENSMAMG00000022892)	pip4k2aa (ENSMAMG00000028729)	spag6 (ENSMAMG00000022897)	bmi1a (ENSMAMG00000025852)	commd3 (ENSMAMG00000024960)	MLLT10 (ENSMAMG00000022904)
Carangaria	ANCESTRAL SPECIES	21	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Pleuronectoidei	ANCESTRAL SPECIES	12	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.d	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042.b	ENSGT00390000015971	ENSGT00940000157711
Turbot	MODERN SPECIES	13	ENSSMAG00000019515	ENSSMAG00000019510	zc2hc1a (ENSSMAG00000019487)	ENSSMAG00000019434	dap (ENSSMAG00000034684)	ENSSMAG00000019414	ropn1l (ENSSMAG00000019396)	nup58 (ENSSMAG00000019368)	ENSSMAG00000019159	amer2 (ENSSMAG00000019140)	ENSSMAG00000019081	pex2 (ENSSMAG00000027830)	ENSSMAG00000019072	ENSSMAG00000019068	PIGN (ENSSMAG00000019048) #21	relch (ENSSMAG00000018803) #22	ENSSMAG00000018782	ENSSMAG00000018772	zgc:112332 (ENSSMAG00000018763)	sec61g (ENSSMAG00000032982)	tpk1 (ENSSMAG00000018743)	ENSSMAG00000018657	ENSSMAG00000018620	c8g (ENSSMAG00000018605)	msrb2 (ENSSMAG00000031104)	ARMC3 (ENSSMAG00000018586)	pip4k2aa (ENSSMAG00000018548)	spag6 (ENSSMAG00000018525)	spag6 (ENSSMAG00000018498)	bmi1a (ENSSMAG00000018463)	commd3 (ENSSMAG00000018433)
Tongue sole	MODERN SPECIES	13	ENSCSEG00000008677	ENSCSEG00000008603	dap (ENSCSEG00000008586)	ENSCSEG00000008570	ropn1l (ENSCSEG00000008549)	nup58 (ENSCSEG00000008504)	mtmr6 (ENSCSEG00000008466)	amer2 (ENSCSEG00000008460)	ENSCSEG00000008458	ENSCSEG00000008453	ZFHX4 (ENSCSEG00000008391)	pex2 (ENSCSEG00000008376)	hnf4g (ENSCSEG00000008367)	ENSCSEG00000008360	pign (ENSCSEG00000008342) #21	relch (ENSCSEG00000008227) #22	ENSCSEG00000008203	ENSCSEG00000008187	si:dkey-94e7.2 (ENSCSEG00000008056)	sec61g (ENSCSEG00000008010)	tpk1 (ENSCSEG00000007977)	CNTNAP2 (ENSCSEG00000007937)	ENSCSEG00000007879	c8g (ENSCSEG00000007868)	msrb2 (ENSCSEG00000007861)	ARMC3 (ENSCSEG00000007847)	pip4k2aa (ENSCSEG00000007810)	spag6 (ENSCSEG00000007783)	bmi1a (ENSCSEG00000007771)	ENSCSEG00000007764	lancl2 (ENSCSEG00000007740)
Carangaria_A	ANCESTRAL SPECIES	15	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Barramundi perch	MODERN SPECIES	173				ENSLCAG00010025354	ENSLCAG00010025350	ropn1l (ENSLCAG00010025339)	nup58 (ENSLCAG00010025330)	mtmr6 (ENSLCAG00010025243)	amer2 (ENSLCAG00010025210)	ENSLCAG00010025207	ZFHX4 (ENSLCAG00010025194)	pex2 (ENSLCAG00010025187)	hnf4g (ENSLCAG00010025167)	ENSLCAG00010025155	pign (ENSLCAG00010025134) #21	relch (ENSLCAG00010024898) #22	ENSLCAG00010024753	ENSLCAG00010024748	si:dkey-94e7.2 (ENSLCAG00010024742)	sec61g (ENSLCAG00010024738)	tpk1 (ENSLCAG00010024731)	cbln17 (ENSLCAG00010024724)	CNTNAP2 (ENSLCAG00010024617)	ENSLCAG00010024564	c8g (ENSLCAG00010024560)	msrb2 (ENSLCAG00010024556)	ARMC3 (ENSLCAG00010024552)	pip4k2aa (ENSLCAG00010024495)	spag6 (ENSLCAG00010024473)	bmi1a (ENSLCAG00010024462)	commd3 (ENSLCAG00010024455)
Seriola	ANCESTRAL SPECIES	36	ENSGT00940000159419	ENSGT00670000099476	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000155244.c.c.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a	ENSGT00940000154516.a.b	ENSGT01050000244868.c.a	ENSGT00440000034309	ENSGT00940000155240.B	ENSGT00940000157476	ENSGT00940000156508	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Yellowtail amberjack	DUPLICATION
Yellowtail amberjack	MODERN SPECIES	2962	ENSSLDG00000011380	dap (ENSSLDG00000011286)	ENSSLDG00000011271	ropn1l (ENSSLDG00000011241)	nup58 (ENSSLDG00000011096)	mtmr6 (ENSSLDG00000011027)	amer2 (ENSSLDG00000011013)	ENSSLDG00000010998	ENSSLDG00000010984	ZFHX4 (ENSSLDG00000010919)	pex2 (ENSSLDG00000010878)	ENSSLDG00000010864	hnf4g (ENSSLDG00000010808)	GPR141 (ENSSLDG00000010785)	pign (ENSSLDG00000010671) #21	relch (ENSSLDG00000010541) #22	ENSSLDG00000010474	ENSSLDG00000010442	si:dkey-94e7.2 (ENSSLDG00000010407)	sec61g (ENSSLDG00000010363)	tpk1 (ENSSLDG00000010302)	ENSSLDG00000010271	CNTNAP2 (ENSSLDG00000010193)	ENSSLDG00000010131	c8g (ENSSLDG00000010104)	msrb2 (ENSSLDG00000010026)	ARMC3 (ENSSLDG00000009930)	pip4k2aa (ENSSLDG00000009882)	spag6 (ENSSLDG00000009835)	bmi1a (ENSSLDG00000009787)	commd3 (ENSSLDG00000009735)
Yellowtail amberjack	MODERN SPECIES	1108																ENSSLDG00000004882 #22
Greater amberjack	MODERN SPECIES	196	ENSSDUG00000004558	ENSSDUG00000004543	ENSSDUG00000004484	dap (ENSSDUG00000004471)	ENSSDUG00000004456	ropn1l (ENSSDUG00000004421)	nup58 (ENSSDUG00000004304)	mtmr6 (ENSSDUG00000004260)	amer2 (ENSSDUG00000004243)	ENSSDUG00000004229	ZFHX4 (ENSSDUG00000004192)	pex2 (ENSSDUG00000004181)	hnf4g (ENSSDUG00000004147)	GPR141 (ENSSDUG00000004132)	pign (ENSSDUG00000004043) #21	relch (ENSSDUG00000003951) #22	ENSSDUG00000003921	ENSSDUG00000003898	si:dkey-94e7.2 (ENSSDUG00000003873)	sec61g (ENSSDUG00000003822)	tpk1 (ENSSDUG00000003788)	ENSSDUG00000003777	ENSSDUG00000003768	CNTNAP2 (ENSSDUG00000003720)	ENSSDUG00000003695	c8g (ENSSDUG00000003673)	msrb2 (ENSSDUG00000003656)	ARMC3 (ENSSDUG00000003643)	pip4k2aa (ENSSDUG00000003579)	spag6 (ENSSDUG00000003545)	bmi1a (ENSSDUG00000003481)
Tiger tail seahorse	MODERN SPECIES	170					ENSHCOG00000013085	ropn1l (ENSHCOG00000013039)	hnf4g (ENSHCOG00000013027)	pex2 (ENSHCOG00000012984)	ZFHX4 (ENSHCOG00000012979)	ENSHCOG00000012945	amer2 (ENSHCOG00000012933)	mtmr6 (ENSHCOG00000012910)	nup58 (ENSHCOG00000012887)	pign (ENSHCOG00000012789) #21	pign (ENSHCOG00000012754) #21	relch (ENSHCOG00000012569) #22	ENSHCOG00000011562	ENSHCOG00000011532	zgc:112332 (ENSHCOG00000011043)	tpk1 (ENSHCOG00000011035)	sec61g (ENSHCOG00000011020)	CNTNAP2 (ENSHCOG00000010986)	ENSHCOG00000010942	c8g (ENSHCOG00000000341)	msrb2 (ENSHCOG00000010910)	ARMC3 (ENSHCOG00000010884)	pip4k2aa (ENSHCOG00000010778)	spag6 (ENSHCOG00000010754)
Pinecone sodierfish	MODERN SPECIES	12	ENSMMDG00005017866	zc2hc1a (ENSMMDG00005017865)	ENSMMDG00005016771	dap (ENSMMDG00005016744)	ENSMMDG00005016740	ropn1l (ENSMMDG00005016684)	nup58 (ENSMMDG00005016672)	mtmr6 (ENSMMDG00005013830)	amer2 (ENSMMDG00005013760)	ENSMMDG00005013752	ZFHX4 (ENSMMDG00005013747)	pex2 (ENSMMDG00005013744)	hnf4g (ENSMMDG00005013742)	GPR141 (ENSMMDG00005013739)	pign (ENSMMDG00005013702) #21	relch (ENSMMDG00005010453) #22	ENSMMDG00005010410	ENSMMDG00005010408	ENSMMDG00005010310	sec61g (ENSMMDG00005010306)	tpk1 (ENSMMDG00005010296)	CNTNAP2 (ENSMMDG00005007471)	ENSMMDG00005007438	c8g (ENSMMDG00005007436)	msrb2 (ENSMMDG00005007433)	ARMC3 (ENSMMDG00005007430)	pip4k2aa (ENSMMDG00005007335)	spag6 (ENSMMDG00005007317)	bmi1a (ENSMMDG00005007312)	commd3 (ENSMMDG00005007307)	MLLT10 (ENSMMDG00005007265)
Cod	MODERN SPECIES	15	zc2hc1a (ENSGMOG00000026964)	ENSGMOG00000028134	ENSGMOG00000025082	ENSGMOG00000022358	ENSGMOG00000011371	nup58 (ENSGMOG00000002242)	ENSGMOG00000002292	amer2 (ENSGMOG00000031265)	ENSGMOG00000025731	ENSGMOG00000029261	ENSGMOG00000025759	ENSGMOG00000025878	ENSGMOG00000001972	ENSGMOG00000019993	PIGN (ENSGMOG00000001987) #21	relch (ENSGMOG00000002037) #22	ENSGMOG00000032257	ENSGMOG00000011955	ENSGMOG00000034128	sec61g (ENSGMOG00000022998)	tpk1 (ENSGMOG00000022273)	ENSGMOG00000008621	ENSGMOG00000008692	ENSGMOG00000008700	msrb2 (ENSGMOG00000008704)	ARMC3 (ENSGMOG00000008711)	pip4k2aa (ENSGMOG00000008754)	SPAG6 (ENSGMOG00000008770)	SKIDA1 (ENSGMOG00000037107)	MLLT10 (ENSGMOG00000014368)	commd3 (ENSGMOG00000014350)
Protacanthopterygii	ANCESTRAL SPECIES	70	ENSGT00940000159419.i	ENSGT00970000197153	ENSGT00940000154952.a.a	ENSGT00940000154574.c	ENSGT00500000044852.a.a.a	ENSGT00390000012731.a.a	ENSGT00730000111111	ENSGT00940000158055	ENSGT00530000063529.A	ENSGT00940000156371.c.a.a.a	ENSGT00940000159542	ENSGT00390000001846	ENSGT00940000158224	ENSGT01030000234518.E.d	ENSGT00390000017600 #21	ENSGT00390000004385 #22	ENSGT00940000168990	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000001319	ENSGT00390000016016.A	ENSGT00940000154516.a.b.a	ENSGT00940000164262	ENSGT00940000154516.a.a	ENSGT00940000154774	ENSGT00940000155013	ENSGT00940000157738	ENSGT00940000162104	ENSGT00900000141099	ENSGT00940000156042	ENSGT00390000015971
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1130														ENSGT00940000159542.c.b	ENSGT00940000158224.j	ENSGT00390000004385.s #22	ENSGT00940000168990.d
Huchen	DUPLICATION
Huchen	MODERN SPECIES	2635														hnf4g (ENSHHUG00000021741)	GPR141 (ENSHHUG00000021761)	ENSHHUG00000021768 #22	ENSHHUG00000021772
Huchen	MODERN SPECIES	2065																relch (ENSHHUG00000007179) #22	ENSHHUG00000007162	sec61g (ENSHHUG00000007153)	ENSHHUG00000006876
Salmoninae_a	ANCESTRAL SPECIES	35	ENSGT00390000012054.a	ENSGT00940000155171.a.a.a.a	ENSGT00390000000183	ENSGT00990000206610.b.a	ENSGT00970000197153.b	ENSGT00940000154952.a.a.q.b	ENSGT00940000154574.c.t	ENSGT00500000044852.a.a.a.g.a.a	ENSGT00390000012731.a.a.g	ENSGT00730000111111.q.a.a	ENSGT00730000111111.q.b	ENSGT00940000158055.g	ENSGT00530000063529.A.e.b	ENSGT00940000159542.c.b	ENSGT00940000158224.j	ENSGT00390000004385.s #22	ENSGT00940000168990.d	ENSGT00390000001319.n	ENSGT00390000016016.A.v	ENSGT00940000154516.a.b.a.b	ENSGT00970000193381.a.a.c.b.a.a.b.a.a.b	ENSGT00940000155013.ab	ENSGT00940000157738.i	ENSGT00900000141099.l	ENSGT00940000156042.g.b	ENSGT00390000015971.h	ENSGT00940000157711.e.b	ENSGT00940000153451.a.b.c	ENSGT00940000156508.h.b	ENSGT00940000157476	ENSGT00940000155240.B.d.b
Salmo	ANCESTRAL SPECIES	67	ENSGT00940000155171.a.a.a.a	ENSGT00390000000183	ENSGT00990000206610.b.a	ENSGT00940000159419.j	ENSGT00970000197153.b	ENSGT00940000154952.a.a.q.b	ENSGT00940000154574.c.t	ENSGT00500000044852.a.a.a.g.b	ENSGT01010000224030	ENSGT00390000012731.a.a.g	ENSGT00730000111111.q.a.a	ENSGT00940000158055.g	ENSGT00530000063529.A.e.b	ENSGT00940000159542.c.b	ENSGT00940000158224.j	ENSGT00390000004385.s #22	ENSGT00940000168990.d	ENSGT00390000001319.n	ENSGT00390000016016.A.v	ENSGT00940000178542	ENSGT00970000193381.a.a.c.b.a.a.b.a.a.b	ENSGT00940000155013.ab	ENSGT00940000157738.i	ENSGT00900000141099.l	ENSGT00940000156042.g.b	ENSGT00390000015971.h	ENSGT00940000157711.e.b	ENSGT00940000153451.a.b.c	ENSGT00940000156508.h.b	ENSGT00940000157476	ENSGT00940000155240.B.d.b
Atlantic salmon	MODERN SPECIES	21	ENSSSAG00000060943	ENSSSAG00000109659	zc2hc1a (ENSSSAG00000099213)	ENSSSAG00000060903	ENSSSAG00000095386	dap (ENSSSAG00000052210)	ENSSSAG00000120678	ENSSSAG00000114043	ropn1l (ENSSSAG00000052240)	ENSSSAG00000052260	ENSSSAG00000052533	ENSSSAG00000111737	ENSSSAG00000081772	ENSSSAG00000118640	ENSSSAG00000047055	relch (ENSSSAG00000111082) #22	ENSSSAG00000088214	ENSSSAG00000047368	sec61g (ENSSSAG00000047374)	tpk1 (ENSSSAG00000047382)	ENSSSAG00000047034	ENSSSAG00000120789	CNTNAP2 (ENSSSAG00000009466)	ENSSSAG00000052183	ezh2 (ENSSSAG00000048075)	pdia4 (ENSSSAG00000047514)	spag6 (ENSSSAG00000080120)	bmi1a (ENSSSAG00000080109)	commd3 (ENSSSAG00000080101)	ENSSSAG00000080099	SKIDA1 (ENSSSAG00000089826)
River trout	MODERN SPECIES	36	ENSSTUG00000022198	ENSSTUG00000022222	ENSSTUG00000022870	dap (ENSSTUG00000022875)	ENSSTUG00000022885	ENSSTUG00000022897	ropn1l (ENSSTUG00000022917)	nup58 (ENSSTUG00000022930)	mtmr6 (ENSSTUG00000023061)	amer2 (ENSSTUG00000025210)	ENSSTUG00000025381	ENSSTUG00000025391	ZFHX4 (ENSSTUG00000025406)	ENSSTUG00000025620	hnf4g (ENSSTUG00000025652)	relch (ENSSTUG00000025736) #22	ENSSTUG00000027832	sec61g (ENSSTUG00000029237)	tpk1 (ENSSTUG00000029241)	ENSSTUG00000029271	ENSSTUG00000029286	ezh2 (ENSSTUG00000029543)	pdia4 (ENSSTUG00000029746)	spag6 (ENSSTUG00000029944)	ENSSTUG00000030018	commd3 (ENSSTUG00000030081)	ENSSTUG00000030127	ENSSTUG00000030177	SKIDA1 (ENSSTUG00000030180)	pip4k2aa (ENSSTUG00000030185)	ENSSTUG00000030199
Oncorhynchus	ANCESTRAL SPECIES	27	ENSGT00390000012054.a	ENSGT00940000155171.a.a.a.a	ENSGT00390000000183	ENSGT00990000206610.a	ENSGT00970000197153.b	ENSGT00940000154952.a.a.q.b	ENSGT00940000154574.c.t	ENSGT00500000044852.a.a.a.g.a.a	ENSGT00390000012731.a.a.g	ENSGT00390000012731.a.a.h	ENSGT00730000111111.q.b	ENSGT00940000158055.g	ENSGT00530000063529.A.e.b	ENSGT00940000159542.c.b	ENSGT00940000158224.j	ENSGT00390000004385.s #22	ENSGT00940000168990.d	ENSGT00390000001319.n	ENSGT00940000154516.a.b.a.b	ENSGT00970000193381.a.a.c.b.a.a.b.a.a.b	ENSGT00940000157738.i	ENSGT00900000141099.l	ENSGT00940000156042.g.b	ENSGT00390000015971.h	ENSGT00940000157711.e.b	ENSGT00940000153451.a.b.c	ENSGT00940000156508.h.a.b.b	ENSGT00940000157476	ENSGT00940000155240.B.d.b	ENSGT01050000244868.d.d	ENSGT00970000193381.a.a.c.b.a.a.b.a.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	27	ENSGT00970000193381.a.a.c.b.a.a.b.a.a.a	ENSGT01050000244868.d.d	ENSGT00940000155240.B.d.b	ENSGT00940000157476	ENSGT00940000156508.h.a.a	ENSGT00940000153451.a.b.c	ENSGT00940000157711.e.b	ENSGT00390000015971.h	ENSGT00940000156042.g.b	ENSGT00900000141099.l	ENSGT00940000157738.i	ENSGT00970000193381.a.a.c.b.a.a.b.a.a.b	ENSGT00940000178542	ENSGT00940000159542.c.b	ENSGT00940000158224.j	ENSGT00390000004385.s #22	ENSGT00940000168990.d	ENSGT00390000001319.n	ENSGT00970000197573
Coho salmon	MODERN SPECIES	2	pip4k2aa (ENSOKIG00005014368)	SKIDA1 (ENSOKIG00005014609)	ENSOKIG00005014616	commd3 (ENSOKIG00005014678)	ENSOKIG00005014699	spag6 (ENSOKIG00005014737)	pdia4 (ENSOKIG00005014802)	ENSOKIG00005014930	ENSOKIG00005014934	ENSOKIG00005014939	ENSOKIG00005014951	ENSOKIG00005014955	ENSOKIG00005014966	ENSOKIG00005014979	ENSOKIG00005014996	relch (ENSOKIG00005015423) #22	ENSOKIG00005016258	sec61g (ENSOKIG00005016273)	ENSOKIG00005016275	ENSOKIG00005016290	ENSOKIG00005016302	amer2 (ENSOKIG00005016314)	MTMR6 (ENSOKIG00005016338)	nup58 (ENSOKIG00005016786)	ENSOKIG00005016836	ENSOKIG00005016856	ENSOKIG00005016875	ENSOKIG00005016951	ENSOKIG00005016958	ENSOKIG00005016962	ENSOKIG00005016972
Chinook salmon	MODERN SPECIES	21	ARMC3 (ENSOTSG00005009397)	ENSOTSG00005009395	pip4k2aa (ENSOTSG00005009393)	pip4k2aa (ENSOTSG00005009392)	SKIDA1 (ENSOTSG00005009390)	ENSOTSG00005009389	commd3 (ENSOTSG00005009388)	BMI1 (ENSOTSG00005009387)	spag6 (ENSOTSG00005009386)	pdia4 (ENSOTSG00005009385)	ENSOTSG00005009382	ENSOTSG00005009381	ENSOTSG00005009380	ENSOTSG00005009379	ENSOTSG00005008788	relch (ENSOTSG00005002854) #22	ENSOTSG00005002731	sec61g (ENSOTSG00005002728)	ENSOTSG00005002724	dap (ENSOTSG00005007567)	ENSOTSG00005007566	ENSOTSG00005007565	ropn1l (ENSOTSG00005007563)	nup58 (ENSOTSG00005007561)	mtmr6 (ENSOTSG00005006206)	ENSOTSG00005006199	cmbl (ENSOTSG00005006198)	ENSOTSG00005006197	MARCHF6 (ENSOTSG00005006194)	si:rp71-1f1.4 (ENSOTSG00005006193)	slc51a (ENSOTSG00005006192)
Rainbow trout	MODERN SPECIES	6	ENSOMYG00000020353	dap (ENSOMYG00000020340)	ENSOMYG00000077446	ropn1l (ENSOMYG00000020322)	ENSOMYG00000052856	ENSOMYG00000056214	ENSOMYG00000020306	ENSOMYG00000049182	ENSOMYG00000020712	ENSOMYG00000063486	ENSOMYG00000074667	ENSOMYG00000068236	ENSOMYG00000069391	ENSOMYG00000061121	ENSOMYG00000020691	ENSOMYG00000020447 #22	ENSOMYG00000059419	ENSOMYG00000055215	ENSOMYG00000020387	ENSOMYG00000020379	ENSOMYG00000048636	ENSOMYG00000007431	pdia4 (ENSOMYG00000007910)	spag6 (ENSOMYG00000008276)	ENSOMYG00000008354	commd3 (ENSOMYG00000077074)	ENSOMYG00000062341	SKIDA1 (ENSOMYG00000008413)	pip4k2aa (ENSOMYG00000048369)	ENSOMYG00000008457	ENSOMYG00000077866
Salmoninae	ANCESTRAL SPECIES	33	ENSGT00940000154952.a.a.q.a.b	ENSGT00940000154574.c.s	ENSGT00500000044852.a.a.a.h	ENSGT00390000012731.a.a.h	ENSGT00730000111111.p	ENSGT00940000158055.h	ENSGT00530000063529.A.e.a	ENSGT00940000159542.c.a	ENSGT00390000001846	ENSGT00670000099350	ENSGT00990000205760	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.a.a.a	ENSGT00940000158224.i	ENSGT01030000234518.E.d.f	ENSGT00390000017600 #21	ENSGT00390000004385.t #22	ENSGT00940000168990.c	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00390000016016.A.u	ENSGT00940000154516.a.b.b
Salmoninae_a	ANCESTRAL SPECIES	32	ENSGT00940000154574.c.s	ENSGT00500000044852.a.a.a.h	ENSGT00390000012731.a.a.h	ENSGT00730000111111.p	ENSGT00940000158055.h	ENSGT00530000063529.A.e.a	ENSGT00940000163999.a.c.b.b	ENSGT00940000159542.c.a	ENSGT00390000001846	ENSGT00670000099350	ENSGT00990000205760	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.a.a.a	ENSGT00940000158224.i	ENSGT01030000234518.E.d.f	ENSGT00390000017600 #21	ENSGT00390000004385.t #22	ENSGT00940000168990.c	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00990000213379	ENSGT00390000016016.A.u	ENSGT01040000240385.A.b.b.a.a.a.b.a.b	ENSGT00940000154516.a.b.a.a	ENSGT00940000164262.e	ENSGT00940000154774.f	ENSGT00940000155013.`b	ENSGT00940000157738.j	ENSGT00940000162104	ENSGT00900000141099.k	ENSGT00940000156042.g.a	ENSGT00390000015971.g
Oncorhynchus	ANCESTRAL SPECIES	28	ENSGT00940000154574.c.s	ENSGT00500000044852.a.a.a.h	ENSGT00990000211529	ENSGT00730000111111.p	ENSGT00940000158055.h	ENSGT00530000063529.A.e.a	ENSGT00940000163999.a.c.b.b	ENSGT00940000159542.c.a	ENSGT00390000001846	ENSGT00670000099350	ENSGT00990000205760	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.a.a.a	ENSGT00940000158224.i	ENSGT01030000234518.E.d.f	ENSGT00390000017600 #21	ENSGT00390000004385.t #22	ENSGT00940000168990.c	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00990000213379	ENSGT00390000016016.A.u	ENSGT00940000154516.a.b.a.a	ENSGT01040000240385.A.b.b.a.a.a.b.a.b	ENSGT00940000164262.e	ENSGT00940000154774.f	ENSGT00940000155013.`b	ENSGT00940000157738.j	ENSGT00940000162104	ENSGT00900000141099.k	ENSGT00940000156042.g.a	ENSGT00390000015971.g
Oncorhynchus_a	ANCESTRAL SPECIES	23	ENSGT00940000159419.i	ENSGT00970000197153.a	ENSGT00940000154952.a.a.q.a.a.b	ENSGT00940000154574.c.s	ENSGT00500000044852.a.a.a.h	ENSGT00990000211529	ENSGT00730000111111.p	ENSGT00940000158055.h	ENSGT00530000063529.A.e.a	ENSGT00940000163999.a.c.b.b	ENSGT00940000159542.c.a	ENSGT00390000001846	ENSGT00940000158224.i	ENSGT01030000234518.E.d.f	ENSGT00390000017600 #21	ENSGT00390000004385.t #22	ENSGT00940000168990.c	ENSGT00940000164667.a	ENSGT00940000164667.b.b	ENSGT00990000213379	ENSGT00390000016016.A.u	ENSGT00940000154516.a.b.a.a	ENSGT01040000240385.A.b.b.a.a.a.b.a.b	ENSGT00940000164262.e	ENSGT00940000154774.f	ENSGT00940000155013.`b	ENSGT00940000157738.j	ENSGT00900000141099.k	ENSGT00940000156042.g.a	ENSGT00940000157711.e.a	ENSGT00940000153451.a.b.d
Coho salmon	MODERN SPECIES	9	ENSOKIG00005043146	ENSOKIG00005043155	nup58 (ENSOKIG00005043213)	mtmr6 (ENSOKIG00005043566)	amer2 (ENSOKIG00005045120)	ENSOKIG00005045142	ENSOKIG00005045148	ENSOKIG00005045159	ZFHX4 (ENSOKIG00005045175)	pex2 (ENSOKIG00005045192)	ENSOKIG00005045205	ENSOKIG00005045279	hnf4g (ENSOKIG00005045299)	GPR141 (ENSOKIG00005045356)	pign (ENSOKIG00005045381) #21	relch (ENSOKIG00005045589) #22	ENSOKIG00005047861	ENSOKIG00005047876	ENSOKIG00005047882	ENSOKIG00005047890	tpk1 (ENSOKIG00005047904)	CNTNAP2 (ENSOKIG00005047995)	ENSOKIG00005048360	CUL1 (ENSOKIG00005048377)	ezh2 (ENSOKIG00005048485)	pdia4 (ENSOKIG00005048622)	spag6 (ENSOKIG00005048697)	ENSOKIG00005048749	ENSOKIG00005048763	ENSOKIG00005048789	SKIDA1 (ENSOKIG00005048809)
Chinook salmon	MODERN SPECIES	7	timm21 (ENSOTSG00005023939)	ENSOTSG00005023936	sema5a (ENSOTSG00005023934)	ENSOTSG00005023933	dap (ENSOTSG00005023932)	ENSOTSG00005023931	ENSOTSG00005023930	ENSOTSG00005023929	zc2hc1a (ENSOTSG00005023928)	ENSOTSG00005023927	ENSOTSG00005023926	ENSOTSG00005023914	ENSOTSG00005023913	ENSOTSG00005023908	pign (ENSOTSG00005023896) #21	relch (ENSOTSG00005011245) #22	ENSOTSG00005011198	ENSOTSG00005011196	ENSOTSG00005011195	ENSOTSG00005011194	tpk1 (ENSOTSG00005011193)	ENSOTSG00005011192	cntnap2a (ENSOTSG00005011191)	CUL1 (ENSOTSG00005011154)	ezh2 (ENSOTSG00005010872)	pdia4 (ENSOTSG00005010866)	spag6 (ENSOTSG00005010857)	BMI1 (ENSOTSG00005010856)	ENSOTSG00005010828	ENSOTSG00005010780	ENSOTSG00005010776
Rainbow trout	MODERN SPECIES	2	ENSOMYG00000018062	ENSOMYG00000055173	amer2 (ENSOMYG00000061958)	ENSOMYG00000018301	ENSOMYG00000018314	ENSOMYG00000018330	ENSOMYG00000017366	pex2 (ENSOMYG00000017348)	ENSOMYG00000070628	ENSOMYG00000017331	ENSOMYG00000056362	ENSOMYG00000017215	ENSOMYG00000017183	PIGN (ENSOMYG00000017034) #21	ENSOMYG00000055085	relch (ENSOMYG00000010535) #22	ENSOMYG00000009112	ENSOMYG00000009080	ENSOMYG00000061959	ENSOMYG00000033036	ENSOMYG00000061730	ENSOMYG00000009066	tpk1 (ENSOMYG00000009021)	ENSOMYG00000048276	ENSOMYG00000068320	CNTNAP2 (ENSOMYG00000063615)	CUL1 (ENSOMYG00000008809)	ENSOMYG00000050125	ezh2 (ENSOMYG00000008028)	pdia4 (ENSOMYG00000007216)	ENSOMYG00000007041
Salmo	ANCESTRAL SPECIES	3	ENSGT00970000197153.a	ENSGT00940000154952.a.a.q.a.b	ENSGT00940000154574.c.s	ENSGT00500000044852.a.a.a.h	ENSGT00390000012731.a.a.h	ENSGT00730000111111.p	ENSGT00940000158055.h	ENSGT00530000063529.A.e.a	ENSGT00940000163999.a.c.b.b	ENSGT00940000159542.c.a	ENSGT00390000001846	ENSGT00670000099350	ENSGT00940000158224.i	ENSGT01030000234518.E.d.f	ENSGT00390000017600 #21	ENSGT00390000004385.t #22	ENSGT00940000168990.c	ENSGT00940000164667.b.b	ENSGT00990000213379	ENSGT00390000016016.A.u	ENSGT01040000240385.A.b.b.a.a.a.b.a.b	ENSGT00940000154516.a.b.a.a	ENSGT00940000154774.f	ENSGT00940000155013.`b	ENSGT00940000157738.j	ENSGT00940000162104	ENSGT00900000141099.k	ENSGT00940000156042.g.a	ENSGT00390000015971.g	ENSGT00940000157711.e.a	ENSGT00940000153451.a.b.d
River trout	MODERN SPECIES	11	ENSSTUG00000047001	ENSSTUG00000046996	ENSSTUG00000046986	nup58 (ENSSTUG00000046714)	mtmr6 (ENSSTUG00000046634)	amer2 (ENSSTUG00000046620)	ENSSTUG00000046611	tlr22 (ENSSTUG00000046595)	ZFHX4 (ENSSTUG00000046582)	pex2 (ENSSTUG00000046578)	ENSSTUG00000046577	hnf4g (ENSSTUG00000046542)	GPR141 (ENSSTUG00000046534)	pign (ENSSTUG00000046377) #21	ENSSTUG00000046338	relch (ENSSTUG00000045716) #22	ENSSTUG00000045660	ENSSTUG00000045615	ENSSTUG00000045604	tpk1 (ENSSTUG00000045445)	ENSSTUG00000045418	CNTNAP2 (ENSSTUG00000045187)	CUL1 (ENSSTUG00000045019)	ezh2 (ENSSTUG00000044855)	pdia4 (ENSSTUG00000044285)	ENSSTUG00000044212	spag6 (ENSSTUG00000044151)	ENSSTUG00000044126	ENSSTUG00000044104	SKIDA1 (ENSSTUG00000044098)	pip4k2aa (ENSSTUG00000043628)
Atlantic salmon	MODERN SPECIES	10	ENSSSAG00000099843	ENSSSAG00000096882	ENSSSAG00000077655	dap (ENSSSAG00000077716)	ENSSSAG00000077721	ropn1l (ENSSSAG00000077726)	nup58 (ENSSSAG00000077750)	ENSSSAG00000077819	tlr13 (ENSSSAG00000077966)	ENSSSAG00000077600	pex2 (ENSSSAG00000089455)	ENSSSAG00000077634	ENSSSAG00000073165	ENSSSAG00000073249	PIGN (ENSSSAG00000073378) #21	relch (ENSSSAG00000075954) #22	tnfrsf11a (ENSSSAG00000077566)	ENSSSAG00000077576	ENSSSAG00000077587	tpk1 (ENSSSAG00000077596)	ENSSSAG00000109741	CNTNAP2 (ENSSSAG00000072666)	CUL1 (ENSSSAG00000090758)	ezh2 (ENSSSAG00000071778)	pdia4 (ENSSSAG00000071703)	ENSSSAG00000071687	spag6 (ENSSSAG00000099051)	ENSSSAG00000071617	commd3 (ENSSSAG00000071562)	ENSSSAG00000071538	SKIDA1 (ENSSSAG00000071533)
Huchen	MODERN SPECIES	617											ENSHHUG00000037303	ENSHHUG00000037310	hnf4g (ENSHHUG00000037313)	GPR141 (ENSHHUG00000037317)	pign (ENSHHUG00000037323) #21	relch (ENSHHUG00000037441) #22	ENSHHUG00000037902	ENSHHUG00000037906	ENSHHUG00000037908	tpk1 (ENSHHUG00000037912)	ENSHHUG00000038025	ENSHHUG00000038033	ENSHHUG00000038038
Northern pike	MODERN SPECIES	20	ENSELUG00000009215	ENSELUG00000029081	ENSELUG00000009267	dap (ENSELUG00000009288)	ENSELUG00000009304	ENSELUG00000024929	nup58 (ENSELUG00000009379)	mtmr6 (ENSELUG00000009434)	amer2 (ENSELUG00000009451)	ENSELUG00000028151	ZFHX4 (ENSELUG00000009500)	pex2 (ENSELUG00000009530)	hnf4g (ENSELUG00000000352)	GPR141 (ENSELUG00000034261)	pign (ENSELUG00000009610) #21	relch (ENSELUG00000010055) #22	ENSELUG00000010169	ENSELUG00000010187	ENSELUG00000010220	sec61g (ENSELUG00000010284)	tpk1 (ENSELUG00000010327)	ENSELUG00000033552	CNTNAP2 (ENSELUG00000001477)	ENSELUG00000010346	CUL1 (ENSELUG00000010614)	ezh2 (ENSELUG00000010686)	pdia4 (ENSELUG00000010710)	ENSELUG00000010794	spag6 (ENSELUG00000010849)	commd3 (ENSELUG00000010894)	ENSELUG00000011051
Spotted gar	MODERN SPECIES	675	cmbl (ENSLOCG00000013544)	marchf6 (ENSLOCG00000013527)	si:rp71-1f1.4 (ENSLOCG00000018167)	ropn1l (ENSLOCG00000013523)	ANKRD33B (ENSLOCG00000013515)	ctnnd2b (ENSLOCG00000013495)	zc2hc1a (ENSLOCG00000013490)	PKIA (ENSLOCG00000013487)	ENSLOCG00000013486	ENSLOCG00000013478	pex2 (ENSLOCG00000013475)	ZFHX4 (ENSLOCG00000013472)	hnf4g (ENSLOCG00000013459)	ENSLOCG00000018166	pign (ENSLOCG00000013442) #21	relch (ENSLOCG00000013429) #22	si:dkey-94e7.2 (ENSLOCG00000013408)	sec61g (ENSLOCG00000013405)	tpk1 (ENSLOCG00000013400)	CNTNAP2 (ENSLOCG00000013353)	cul1b (ENSLOCG00000013339)	ezh2 (ENSLOCG00000013329)	pdia4 (ENSLOCG00000013319)	ENSLOCG00000013313	zgc:162895 (ENSLOCG00000013303)	RAMP3 (ENSLOCG00000013297)	mcm6l (ENSLOCG00000013289)	ANKS6 (ENSLOCG00000013281)	ahrrb (ENSLOCG00000013271)	exoc3 (ENSLOCG00000013261)	pigm (ENSLOCG00000013256)
Reedfish	MODERN SPECIES	14	riok1 (ENSECRG00000002592)	ssr1 (ENSECRG00000002570)	RREB1 (ENSECRG00000002539)	f13a1b (ENSECRG00000002498)	nrn1a (ENSECRG00000002479)	fars2 (ENSECRG00000002463)	LYRM4 (ENSECRG00000002454)	ENSECRG00000002424	RPP40 (ENSECRG00000002392)	CDY1 (ENSECRG00000002367)	eci2 (ENSECRG00000002330)	epdr1 (ENSECRG00000002312)	SFRP4 (ENSECRG00000002301)	ENSECRG00000002288	pign (ENSECRG00000002263) #21	ENSECRG00000002236 #22	ENSECRG00000002207 #23	ENSECRG00000002188	ENSECRG00000002168	PXDC1 (ENSECRG00000002155)	ENSECRG00000002132	si:dkey-94e7.2 (ENSECRG00000002113)	rdh12l (ENSECRG00000002092)	sec61g (ENSECRG00000002080)	ENSECRG00000002071	ENSECRG00000002053	tpk1 (ENSECRG00000002042)	ENSECRG00000002022	CNTNAP2 (ENSECRG00000001973)	cul1b (ENSECRG00000001858)	pdia4 (ENSECRG00000001801)
Elephant shark	MODERN SPECIES	1525							cdh12a (ENSCMIG00000014400)	CDH6 (ENSCMIG00000014514)	drosha (ENSCMIG00000014644)	zgc:56556 (ENSCMIG00000014902)	mc4r (ENSCMIG00000014904) #16	ENSCMIG00000014908	CDH20 (ENSCMIG00000014918) #17	RNF152 (ENSCMIG00000014983) #20	pign (ENSCMIG00000014987) #21	relch (ENSCMIG00000015098) #22	ENSCMIG00000015591	ENSCMIG00000015593 ##24	ENSCMIG00000015596 #24	PHLPP1 (ENSCMIG00000015607) #25	ENSCMIG00000015652	ENSCMIG00000015657	ENSCMIG00000015663	UBE2E2 (ENSCMIG00000015664)	ENSCMIG00000015668	ENSCMIG00000015670	rpl15 (ENSCMIG00000015672)	ENSCMIG00000015675	nr1d2b (ENSCMIG00000015679)	thrb (ENSCMIG00000015694)	RARB (ENSCMIG00000015711)
Cyclostomata	DUPLICATION
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00390000004385.u #22
Hagfish	MODERN SPECIES	958	ENSEBUG00000002648	ENSEBUG00000003691	ENSEBUG00000007921	f2rl1.1 (ENSEBUG00000002281)	klhl26 (ENSEBUG00000007812)	serinc5 (ENSEBUG00000015816)	ENSEBUG00000014612	nfs1 (ENSEBUG00000010539)	PDP1 (ENSEBUG00000013809)	ENSEBUG00000016638	ENSEBUG00000012231	ENSEBUG00000002621	ENSEBUG00000002438	ENSEBUG00000006510	map1lc3a (ENSEBUG00000015838)	ENSEBUG00000004845 #22	exosc4 (ENSEBUG00000014277)	ENSEBUG00000015308 #22
Lamprey	MODERN SPECIES	474															ENSPMAG00000002570	ENSPMAG00000002604 #22	CDYL (ENSPMAG00000002613)
Cyclostomata	ANCESTRAL SPECIES	65													ENSGT00940000160007	ENSGT00390000007315	ENSGT00390000017600 #21	ENSGT00390000004385.v #22
Hagfish	DUPLICATION
Hagfish	DUPLICATION
Hagfish	MODERN SPECIES	588					ENSEBUG00000014109	ENSEBUG00000016611	ENSEBUG00000011638	ENSEBUG00000015417	ENSEBUG00000008210	ENSEBUG00000005163	ENSEBUG00000000948	ENSEBUG00000003612	ENSEBUG00000003740	MTHFSD (ENSEBUG00000008720)	ENSEBUG00000006276 #22	ENSEBUG00000006502 #22	ENSEBUG00000005354	ENSEBUG00000014221	ENSEBUG00000005804	ENSEBUG00000005917	ENSEBUG00000014571	ENSEBUG00000016153	ENSEBUG00000012792	ENSEBUG00000009513	ENSEBUG00000015342
Hagfish	MODERN SPECIES	588						ENSEBUG00000014109	ENSEBUG00000016611	ENSEBUG00000011638	ENSEBUG00000015417	ENSEBUG00000008210	ENSEBUG00000005163	ENSEBUG00000000948	ENSEBUG00000003612	ENSEBUG00000003740	MTHFSD (ENSEBUG00000008720)	ENSEBUG00000006276 #22	ENSEBUG00000006502 #22	ENSEBUG00000005354	ENSEBUG00000014221	ENSEBUG00000005804	ENSEBUG00000005917	ENSEBUG00000014571	ENSEBUG00000016153	ENSEBUG00000012792	ENSEBUG00000009513	ENSEBUG00000015342
Hagfish	MODERN SPECIES	958	ENSEBUG00000007921	f2rl1.1 (ENSEBUG00000002281)	klhl26 (ENSEBUG00000007812)	serinc5 (ENSEBUG00000015816)	ENSEBUG00000014612	nfs1 (ENSEBUG00000010539)	PDP1 (ENSEBUG00000013809)	ENSEBUG00000016638	ENSEBUG00000012231	ENSEBUG00000002621	ENSEBUG00000002438	ENSEBUG00000006510	map1lc3a (ENSEBUG00000015838)	ENSEBUG00000004845 #22	exosc4 (ENSEBUG00000014277)	ENSEBUG00000015308 #22
Lamprey	MODERN SPECIES	254													ENSPMAG00000000155	vps35 (ENSPMAG00000000158)	pign (ENSPMAG00000000161) #21	relch (ENSPMAG00000000164) #22	tmppe (ENSPMAG00000000168)	ENSPMAG00000000169	ENSPMAG00000000170	VSTM2B (ENSPMAG00000000171)
Ciona	ANCESTRAL SPECIES	32										ENSGT00940000158792	ENSGT00390000013709	ENSGT00550000075089.p	ENSGT00940000158193	ENSGT00950000182989.D.a.a	ENSGT00390000004250	ENSGT00390000004385 #22	ENSGT00940000162658	ENSGT00940000170786
Ciona intestinalis	MODERN SPECIES	12	ENSCING00000007463	mox (ENSCING00000007464)	ENSCING00000007465	ENSCING00000007466	ENSCING00000007469	ENSCING00000007470	ENSCING00000025001	ENSCING00000018274	ENSCING00000007475	ENSCING00000007479	ENSCING00000018220	ENSCING00000005213	ENSCING00000007488	ENSCING00000007491	ENSCING00000007501	ENSCING00000007502 #22	ENSCING00000007504	ENSCING00000021350	ENSCING00000007507	ENSCING00000013179	zf(c2h2)-43 (ENSCING00000007508)	ENSCING00000019889	ENSCING00000013178	ENSCING00000007509	ENSCING00000025119	ENSCING00000021949	ENSCING00000020540	ENSCING00000007511	ENSCING00000007512	ENSCING00000013176	ENSCING00000007514
Ciona savignyi	MODERN SPECIES	125	ENSCSAVG00000001245	ENSCSAVG00000001248	ENSCSAVG00000001258	ENSCSAVG00000001264	ENSCSAVG00000001314	ENSCSAVG00000001459	ENSCSAVG00000001462	ENSCSAVG00000001464	ENSCSAVG00000001465	ENSCSAVG00000001467	ENSCSAVG00000001469	ENSCSAVG00000001475	ENSCSAVG00000001501	ENSCSAVG00000001506	ENSCSAVG00000001551	ENSCSAVG00000001554 #22	ENSCSAVG00000001588	ENSCSAVG00000001589	ENSCSAVG00000001591	ENSCSAVG00000001637	ENSCSAVG00000001656	ENSCSAVG00000001662	ENSCSAVG00000001709	ENSCSAVG00000001719