Muroidea_A ANCESTRAL SPECIES 11 ENSGT00510000048701 ENSGT00900000143212 ENSGT00940000156778 ENSGT00530000063408.A ENSGT00940000158473 ENSGT00940000161388 ENSGT00940000156283 ENSGT00390000008373 ENSGT00940000156638 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000161275 ENSGT00950000182985.b.a #20 ENSGT00390000004348 #21 ENSGT00940000157723 #22 ENSGT00940000157477 #23 ENSGT00730000111244 #24 ENSGT00940000158401 #25 ENSGT00390000013337 #26 ENSGT00530000064023.b #27 ENSGT00390000012924.a #28 ENSGT00940000158133 #29 ENSGT00940000154481.a.b ENSGT00390000011642 #31 ENSGT00950000183154.a #32 ENSGT00530000063692.b #33 ENSGT00940000155683 #34 ENSGT00940000155393.d #35 ENSGT00940000158236 #36 ENSGT00940000154428.b #37 Murinae ANCESTRAL SPECIES 29 ENSGT00950000182985.b.a #20 ENSGT00390000004348 #21 ENSGT00940000157723 #22 ENSGT00940000157477 #23 ENSGT00730000111244 #24 ENSGT00940000158401 #25 ENSGT00390000013337 #26 ENSGT00530000064023.b #27 ENSGT00390000012924.a #28 ENSGT00940000158133 #29 ENSGT00940000154481.a.b ENSGT00390000011642 #31 ENSGT00950000183154.a #32 ENSGT00530000063692.b #33 ENSGT00940000155683 #34 ENSGT00940000155393.d #35 ENSGT00940000158236 #36 ENSGT00940000154428.b #37 Mus ANCESTRAL SPECIES 15 ENSGT00950000182985.b.a #20 ENSGT00390000004348 #21 ENSGT00940000157723 #22 ENSGT00940000157477 #23 ENSGT00730000111244 #24 ENSGT00940000158401 #25 ENSGT00390000013337 #26 ENSGT00530000064023.b #27 ENSGT00390000012924.a #28 ENSGT00940000158133 #29 ENSGT00940000154481.a.b ENSGT00390000011642 #31 ENSGT00950000183154.a #32 ENSGT00530000063692.b #33 ENSGT00940000155683 #34 ENSGT00940000155393.d #35 ENSGT00940000158236 #36 ENSGT00940000154428.b #37 Mus_A ANCESTRAL SPECIES 11 ENSGT00950000182985.b.a #20 ENSGT00390000004348 #21 ENSGT00940000157723 #22 ENSGT00940000157477 #23 ENSGT00730000111244 #24 ENSGT00940000158401.a #25 ENSGT00390000013337 #26 ENSGT00530000064023.b #27 ENSGT00390000012924.a #28 ENSGT00940000158133 #29 ENSGT00940000154481.a.b ENSGT00390000011642 #31 ENSGT00950000183154.a #32 ENSGT00530000063692.b #33 ENSGT00940000155683 #34 ENSGT00940000155393.d #35 ENSGT00940000158236 #36 ENSGT00940000154428.b #37 Mus_B ANCESTRAL SPECIES 10 ENSGT00940000169591.d #16 ENSGT01100000263517.b.d.m.a.a.a.a.c.x #19 ENSGT00950000182985.b.a #20 ENSGT00390000004348 #21 ENSGT00940000157723 #22 ENSGT00940000157477 #23 ENSGT00730000111244 #24 ENSGT00940000158401.a #25 ENSGT00390000013337 #26 ENSGT00530000064023.b #27 ENSGT00390000012924.a #28 ENSGT00940000158133 #29 ENSGT00940000154481.a.b ENSGT00390000011642 #31 ENSGT00950000183154.a #32 ENSGT00530000063692.b #33 ENSGT00940000155683 #34 ENSGT00940000155393.d #35 ENSGT00940000158236 #36 ENSGT00940000154428.b #37 Mus_C ANCESTRAL SPECIES 7 ENSGT00940000169591.d #16 ENSGT01100000263517.b.d.m.a.a.a.a.c.x #19 ENSGT00950000182985.b.a #20 ENSGT00390000004348 #21 ENSGT00940000157723 #22 ENSGT00940000157477 #23 ENSGT00730000111244 #24 ENSGT00940000158401.a #25 ENSGT00390000013337 #26 ENSGT00530000064023.b #27 ENSGT00390000012924.a #28 ENSGT00940000158133 #29 ENSGT00940000154481.a.b ENSGT00390000011642 #31 ENSGT00950000183154.a #32 ENSGT00530000063692.b #33 ENSGT00940000155683 #34 ENSGT00940000155393.d #35 ENSGT00940000158236 #36 ENSGT00940000154428.b #37 spretus MODERN SPECIES 1 MGP_SPRETEiJ_G0015877 #16 MGP_SPRETEiJ_G0015878 #17 MGP_SPRETEiJ_G0015880 #18 MGP_SPRETEiJ_G0015881 #19 Ppp1r14c (MGP_SPRETEiJ_G0015882) #20 Iyd (MGP_SPRETEiJ_G0015883) #21 Plekhg1 (MGP_SPRETEiJ_G0015884) #22 Mthfd1l (MGP_SPRETEiJ_G0015885) #23 Akap12 (MGP_SPRETEiJ_G0015886) #24 Zbtb2 (MGP_SPRETEiJ_G0015887) #25 Rmnd1 (MGP_SPRETEiJ_G0015888) #26 Armt1 (MGP_SPRETEiJ_G0015889) #27 Ccdc170 (MGP_SPRETEiJ_G0015890) #28 Esr1 (MGP_SPRETEiJ_G0015891) #29 MGP_SPRETEiJ_G0015893 #30 Myct1 (MGP_SPRETEiJ_G0015895) #31 Vip (MGP_SPRETEiJ_G0015896) #32 Fbxo5 (MGP_SPRETEiJ_G0015897) #33 Mtrf1l (MGP_SPRETEiJ_G0015898) #34 Rgs17 (MGP_SPRETEiJ_G0015899) #35 Oprm1 (MGP_SPRETEiJ_G0015900) #36 Ipcef1 (MGP_SPRETEiJ_G0015901) #37 Steppe mouse MODERN SPECIES 3173 ENSMSIG00000028950 #17 ENSMSIG00000028953 H60c (ENSMSIG00000028958) #16 ENSMSIG00000028966 #20 ENSMSIG00000028971 #21 Plekhg1 (ENSMSIG00000028989) #22 Mthfd1l (ENSMSIG00000029009) #23 ENSMSIG00000029049 Akap12 (ENSMSIG00000029068) #24 ENSMSIG00000029085 Zbtb2 (ENSMSIG00000029096) #25 Rmnd1 (ENSMSIG00000029100) #26 Armt1 (ENSMSIG00000029112) #27 Ccdc170 (ENSMSIG00000029125) #28 Esr1 (ENSMSIG00000029132) #29 Syne1 (ENSMSIG00000029148) Myct1 (ENSMSIG00000029269) #31 Vip (ENSMSIG00000029272) #32 Mouse MODERN SPECIES 1 H60c (ENSMUSG00000091618) #16 Ppp1r14c (ENSMUSG00000040653) #20 Iyd (ENSMUSG00000019762) #21 Plekhg1 (ENSMUSG00000040624) #22 Mthfd1l (ENSMUSG00000040675) #23 Akap12 (ENSMUSG00000038587) #24 Zbtb2 (ENSMUSG00000075327) #25 Rmnd1 (ENSMUSG00000019763) #26 Armt1 (ENSMUSG00000061759) #27 Ccdc170 (ENSMUSG00000019767) #28 Esr1 (ENSMUSG00000019768) #29 Syne1 (ENSMUSG00000096054) Myct1 (ENSMUSG00000046916) #31 Vip (ENSMUSG00000019772) #32 Fbxo5 (ENSMUSG00000019773) #33 Mtrf1l (ENSMUSG00000019774) #34 Rgs17 (ENSMUSG00000019775) #35 Oprm1 (ENSMUSG00000000766) #36 Ipcef1 (ENSMUSG00000064065) #37 Ryukyu mouse MODERN SPECIES 1 Ppp1r14c (MGP_CAROLIEiJ_G0015077) #20 Iyd (MGP_CAROLIEiJ_G0015078) #21 Plekhg1 (MGP_CAROLIEiJ_G0015079) #22 Mthfd1l (MGP_CAROLIEiJ_G0015080) #23 Akap12 (MGP_CAROLIEiJ_G0015081) #24 Zbtb2 (MGP_CAROLIEiJ_G0015082) #25 Rmnd1 (MGP_CAROLIEiJ_G0015083) #26 Armt1 (MGP_CAROLIEiJ_G0015084) #27 Ccdc170 (MGP_CAROLIEiJ_G0015085) #28 Esr1 (MGP_CAROLIEiJ_G0015086) #29 MGP_CAROLIEiJ_G0015087 MGP_CAROLIEiJ_G0015088 Myct1 (MGP_CAROLIEiJ_G0015089) #31 Vip (MGP_CAROLIEiJ_G0015090) #32 Fbxo5 (MGP_CAROLIEiJ_G0015091) #33 Mtrf1l (MGP_CAROLIEiJ_G0015092) #34 Rgs17 (MGP_CAROLIEiJ_G0015093) #35 Oprm1 (MGP_CAROLIEiJ_G0015094) #36 Shrew mouse MODERN SPECIES 13 Ubash3a (MGP_PahariEiJ_G0023683) Rsph1 (MGP_PahariEiJ_G0023684) Slc37a1 (MGP_PahariEiJ_G0023685) Pde9a (MGP_PahariEiJ_G0023686) MGP_PahariEiJ_G0023687 Ndufv3 (MGP_PahariEiJ_G0023688) Pknox1 (MGP_PahariEiJ_G0023689) Cbs (MGP_PahariEiJ_G0023690) U2af1 (MGP_PahariEiJ_G0023691) Cryaa (MGP_PahariEiJ_G0023692) Sik1 (MGP_PahariEiJ_G0023693) MGP_PahariEiJ_G0023694 Rrp1b (MGP_PahariEiJ_G0023695) Ppp1r14c (MGP_PahariEiJ_G0023696) #20 Iyd (MGP_PahariEiJ_G0023697) #21 Plekhg1 (MGP_PahariEiJ_G0023698) #22 Mthfd1l (MGP_PahariEiJ_G0023699) #23 Akap12 (MGP_PahariEiJ_G0023700) #24 Zbtb2 (MGP_PahariEiJ_G0023701) #25 MGP_PahariEiJ_G0023702 Armt1 (MGP_PahariEiJ_G0023703) #27 MGP_PahariEiJ_G0023704 #28 Esr1 (MGP_PahariEiJ_G0023705) #29 MGP_PahariEiJ_G0023706 MGP_PahariEiJ_G0023707 Myct1 (MGP_PahariEiJ_G0023708) #31 Vip (MGP_PahariEiJ_G0023709) #32 Fbxo5 (MGP_PahariEiJ_G0023710) #33 Mtrf1l (MGP_PahariEiJ_G0023711) #34 Rgs17 (MGP_PahariEiJ_G0023712) #35 Oprm1 (MGP_PahariEiJ_G0023713) #36 Rat MODERN SPECIES LOC102551340 (ENSRNOG00000047145) Zfp273l-ps1 (ENSRNOG00000046353) ENSRNOG00000068667 ENSRNOG00000066169 ENSRNOG00000067171 ENSRNOG00000070839 ENSRNOG00000068976 ENSRNOG00000063413 ENSRNOG00000067926 ENSRNOG00000069813 ENSRNOG00000067477 ENSRNOG00000070838 AABR07001348.1 (ENSRNOG00000023081) #19 Ppp1r14c (ENSRNOG00000016368) #20 Iyd (ENSRNOG00000016286) #21 Plekhg1 (ENSRNOG00000016011) #22 Mthfd1l (ENSRNOG00000019582) #23 Akap12 (ENSRNOG00000019549) #24 Zbtb2 (ENSRNOG00000019544) #25 Rmnd1 (ENSRNOG00000019501) #26 Armt1 (ENSRNOG00000019489) #27 Ccdc170 (ENSRNOG00000024280) #28 Esr1 (ENSRNOG00000019358) #29 Syne1 (ENSRNOG00000018960) Myct1 (ENSRNOG00000018858) #31 Vip (ENSRNOG00000018808) #32 Fbxo5 (ENSRNOG00000024077) #33 Mtrf1l (ENSRNOG00000018773) #34 Rgs17 (ENSRNOG00000018690) #35 AABR07001408.1 (ENSRNOG00000033265) ENSRNOG00000070385 Cricetidae ANCESTRAL SPECIES 11 ENSGT00510000048701 ENSGT00900000143212 ENSGT00940000156778 ENSGT00530000063408.A ENSGT00940000158473 ENSGT00940000161388 ENSGT00940000156283 ENSGT00390000008373 ENSGT00940000156638 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000161275 ENSGT00950000182985.b.a #20 ENSGT00390000004348 #21 ENSGT00940000157723 #22 ENSGT00940000157477 #23 ENSGT00730000111244 #24 ENSGT00940000158401 #25 ENSGT00390000013337 #26 ENSGT00530000064023.b #27 ENSGT00390000012924.a #28 ENSGT00940000158133 #29 ENSGT00940000154481.a.b ENSGT00390000011642 #31 ENSGT00950000183154.a #32 ENSGT00530000063692.b #33 ENSGT00940000155683 #34 ENSGT00940000155393.d #35 ENSGT00940000158236 #36 ENSGT00940000154428.b #37 Cricetinae ANCESTRAL SPECIES 7 ENSGT00510000048701 ENSGT00900000143212 ENSGT00940000156778 ENSGT00530000063408.A ENSGT00940000158473 ENSGT00940000161388 ENSGT00940000156283 ENSGT00390000008373 ENSGT00940000156638 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000161275 ENSGT00950000182985.b.a #20 ENSGT00390000004348 #21 ENSGT00940000157723 #22 ENSGT00940000157477 #23 ENSGT00730000111244 #24 ENSGT00940000158401 #25 ENSGT00390000013337 #26 ENSGT00530000064023.b #27 ENSGT00390000012924.a #28 ENSGT00940000158133 #29 ENSGT00940000154481.a.b ENSGT00940000165162 ENSGT00390000011642 #31 ENSGT00950000183154.a #32 ENSGT00530000063692.b #33 ENSGT00940000155683 #34 ENSGT00940000155393.d #35 ENSGT00940000158236 #36 Chinese hamster chok1gshd MODERN SPECIES 1 Sash1 (ENSCGRG00001005888) ENSCGRG00001006451 Ust (ENSCGRG00001021198) ENSCGRG00001021850 Tab2 (ENSCGRG00001022302) Zc3h12d (ENSCGRG00001019159) Ppil4 (ENSCGRG00001019623) Ginm1 (ENSCGRG00001022724) Katna1 (ENSCGRG00001023013) Lats1 (ENSCGRG00001023972) ENSCGRG00001019911 Pcmt1 (ENSCGRG00001009158) Lrp11 (ENSCGRG00001010309) Ppp1r14c (ENSCGRG00001022707) #20 Iyd (ENSCGRG00001022969) #21 Plekhg1 (ENSCGRG00001023431) #22 Mthfd1l (ENSCGRG00001022372) #23 Akap12 (ENSCGRG00001022879) #24 Zbtb2 (ENSCGRG00001023273) #25 Rmnd1 (ENSCGRG00001018312) #26 Armt1 (ENSCGRG00001019042) #27 Ccdc170 (ENSCGRG00001019582) #28 Esr1 (ENSCGRG00001024268) #29 ENSCGRG00001024508 ENSCGRG00001016292 ENSCGRG00001017406 Myct1 (ENSCGRG00001007389) #31 Vip (ENSCGRG00001023726) #32 Fbxo5 (ENSCGRG00001024225) #33 Mtrf1l (ENSCGRG00001024662) #34 Rgs17 (ENSCGRG00001008622) #35 Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 621 ENSMAUG00000001554 ENSMAUG00000020795 ENSMAUG00000008799 Tab2 (ENSMAUG00000011287) Zc3h12d (ENSMAUG00000015783) Ppil4 (ENSMAUG00000015059) Ginm1 (ENSMAUG00000008067) ENSMAUG00000016471 ENSMAUG00000012301 Lats1 (ENSMAUG00000020092) Nup43 (ENSMAUG00000018659) Pcmt1 (ENSMAUG00000011320) Lrp11 (ENSMAUG00000014809) Ppp1r14c (ENSMAUG00000019718) #20 Iyd (ENSMAUG00000013810) #21 ENSMAUG00000011570 #22 Mthfd1l (ENSMAUG00000016191) #23 ENSMAUG00000020409 #24 Zbtb2 (ENSMAUG00000008627) #25 Rmnd1 (ENSMAUG00000011585) #26 Armt1 (ENSMAUG00000012945) #27 Ccdc170 (ENSMAUG00000008640) #28 Esr1 (ENSMAUG00000006785) #29 ENSMAUG00000014937 ENSMAUG00000012320 ENSMAUG00000019847 Myct1 (ENSMAUG00000014906) #31 Vip (ENSMAUG00000014470) #32 Fbxo5 (ENSMAUG00000000824) #33 Mtrf1l (ENSMAUG00000017702) #34 ENSMAUG00000021559 Golden Hamster MODERN SPECIES 50 ENSMAUG00000015378 #22 Cricetidae_B ANCESTRAL SPECIES 21 ENSGT00950000182906.b.a ENSGT00510000048701 ENSGT00940000156778 ENSGT00530000063408.A ENSGT00940000158473 ENSGT00940000161388 ENSGT00940000156283 ENSGT00390000008373 ENSGT00940000156638 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000161275 ENSGT00950000182985.b.a #20 ENSGT00390000004348 #21 ENSGT00940000157723 #22 ENSGT00940000157477 #23 ENSGT00730000111244 #24 ENSGT00940000158401 #25 ENSGT00390000013337 #26 ENSGT00530000064023.b #27 ENSGT00390000012924.a #28 ENSGT00940000158133 #29 ENSGT00940000154481.a.b ENSGT00390000011642 #31 ENSGT00950000183154.a #32 ENSGT00530000063692.b #33 ENSGT00940000155683 #34 ENSGT00940000155393.d #35 ENSGT00940000158236 #36 ENSGT00940000154428.b #37 Prairie vole MODERN SPECIES 358 Tspyl4 (ENSMOCG00000006852) Tspyl1 (ENSMOCG00000007884) Dse (ENSMOCG00000021598) Calhm6 (ENSMOCG00000017769) Calhm5 (ENSMOCG00000011633) Trappc3l (ENSMOCG00000011302) Calhm4 (ENSMOCG00000004418) ENSMOCG00000002869 ENSMOCG00000021945 Grik2 (ENSMOCG00000022205) Ascc3 (ENSMOCG00000004549) Sim1 (ENSMOCG00000017754) ENSMOCG00000008070 Ppp1r14c (ENSMOCG00000002551) #20 Iyd (ENSMOCG00000012475) #21 Plekhg1 (ENSMOCG00000006027) #22 Mthfd1l (ENSMOCG00000011918) #23 ENSMOCG00000019373 #24 Zbtb2 (ENSMOCG00000018175) #25 Rmnd1 (ENSMOCG00000012373) #26 Armt1 (ENSMOCG00000008335) #27 Ccdc170 (ENSMOCG00000015340) #28 ENSMOCG00000008666 Esr1 (ENSMOCG00000004623) #29 Syne1 (ENSMOCG00000003007) Myct1 (ENSMOCG00000003327) #31 Vip (ENSMOCG00000000402) #32 Fbxo5 (ENSMOCG00000016622) #33 Mtrf1l (ENSMOCG00000016147) #34 Rgs17 (ENSMOCG00000013891) #35 Oprm1 (ENSMOCG00000009671) #36 Northern American deer mouse MODERN SPECIES 7 Ginm1 (ENSPEMG00000018350) Katna1 (ENSPEMG00000020852) Lats1 (ENSPEMG00000021147) Nup43 (ENSPEMG00000022692) Pcmt1 (ENSPEMG00000027593) Lrp11 (ENSPEMG00000000669) ENSPEMG00000026371 ##19 ENSPEMG00000026324 ENSPEMG00000027039 #19 ENSPEMG00000025014 ENSPEMG00000028469 ##19 ENSPEMG00000029355 #19 ENSPEMG00000031117 Ppp1r14c (ENSPEMG00000026419) #20 Iyd (ENSPEMG00000009998) #21 Plekhg1 (ENSPEMG00000003381) #22 Mthfd1l (ENSPEMG00000012428) #23 ENSPEMG00000028722 #24 Zbtb2 (ENSPEMG00000028248) #25 Rmnd1 (ENSPEMG00000014544) #26 Armt1 (ENSPEMG00000027664) #27 Ccdc170 (ENSPEMG00000018858) #28 ENSPEMG00000028412 Esr1 (ENSPEMG00000012747) #29 ENSPEMG00000000704 ENSPEMG00000029017 ENSPEMG00000013933 ENSPEMG00000007014 Myct1 (ENSPEMG00000016041) #31 Vip (ENSPEMG00000007974) #32 ENSPEMG00000005147