Gnathostomata DUPLICATION Euteleostomi ANCESTRAL SPECIES 17 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00940000164439 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818 ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT01020000230394.e.b.b.a.a ENSGT00390000014448 Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 13 cct2 (ENSCHAG00000009633) #7 cpsf6 (ENSCHAG00000009684) #8 dkc1 (ENSCHAG00000009747) #9 ppp6r2a (ENSCHAG00000010799) #10 sbf1 (ENSCHAG00000011339) #11 ppp6r2a (ENSCHAG00000013983) #12 sbf1 (ENSCHAG00000014179) #13 ADM2 (ENSCHAG00000015251) #14 ENSCHAG00000015267 #15 hsp90b1 (ENSCHAG00000015352) #16 ENSCHAG00000017650 #17 glt8d2 (ENSCHAG00000017659) #18 fbxo18 (ENSCHAG00000017821) #19 ENSCHAG00000018371 #20 ENSCHAG00000019409 #21 ENSCHAG00000019430 #22 mkln1 (ENSCHAG00000019460) #23 ENSCHAG00000020067 #24 ENSCHAG00000020138 #25 gdi2 (ENSCHAG00000020146) #26 ankrd16 (ENSCHAG00000020318) #27 dennd6b (ENSCHAG00000020340) #28 avpr1ab (ENSCHAG00000020900) #29 srgap1b (ENSCHAG00000021290) #30 kics2 (ENSCHAG00000023165) #31 parp12b (ENSCHAG00000023169) #32 svopl (ENSCHAG00000023176) #33 mical3b (ENSCHAG00000023196) #34 TSPAN9 (ENSCHAG00000023272) #35 dmtf1 (ENSCHAG00000023288) #36 tmem243b (ENSCHAG00000023300) #37 Denticle herring MODERN SPECIES 4 GNG12 (ENSDCDG00000027503) gadd45ab (ENSDCDG00000027505) ENSDCDG00000027507 ENSDCDG00000027511 ENSDCDG00000027514 GLUL (ENSDCDG00000027516) pbx1b (ENSDCDG00000027536) med8 (ENSDCDG00000027972) SZT2 (ENSDCDG00000027982) hyi (ENSDCDG00000028002) ENSDCDG00000028007 ptprfa (ENSDCDG00000028024) ENSDCDG00000028192 zgc:92140 (ENSDCDG00000028288) colgalt2b (ENSDCDG00000028295) ENSDCDG00000028375 #22 ENSDCDG00000028946 ENSDCDG00000028947 pfn2a (ENSDCDG00000028949) rnf13 (ENSDCDG00000028952) commd2 (ENSDCDG00000028959) wwtr1 (ENSDCDG00000028961) tm4sf4 (ENSDCDG00000028962) ENSDCDG00000028964 TM4SF1 (ENSDCDG00000028967) cp (ENSDCDG00000028974) hps3 (ENSDCDG00000029096) ENSDCDG00000029133 si:ch211-284e20.8 (ENSDCDG00000029138) ENSDCDG00000029143 ahsg1 (ENSDCDG00000029145) Clupeiformes DUPLICATION Clupeiformes ANCESTRAL SPECIES ENSGT00390000009047.b.e.a ##22 Denticle herring MODERN SPECIES 250 gcsha (ENSDCDG00000009152) ENSDCDG00000009094 si:dkey-30c15.13 (ENSDCDG00000009048) ENSDCDG00000008792 chid1 (ENSDCDG00000008779) gatd1 (ENSDCDG00000008771) cd151 (ENSDCDG00000008764) ENSDCDG00000008758 cracr2b (ENSDCDG00000008752) ENSDCDG00000008729 ucmab (ENSDCDG00000007936) camk1db (ENSDCDG00000007784) ucmab (ENSDCDG00000007765) ENSDCDG00000007749 ENSDCDG00000007744 ##22 ENSDCDG00000007741 ##22 ENSDCDG00000007668 ENSDCDG00000007663 cracr2b (ENSDCDG00000007656) ENSDCDG00000007655 cd151 (ENSDCDG00000007652) gatd1 (ENSDCDG00000007646) chid1 (ENSDCDG00000007548) ENSDCDG00000007502 si:dkey-30c15.13 (ENSDCDG00000007487) ENSDCDG00000007481 ENSDCDG00000011279 ENSDCDG00000011264 dhtkd1 (ENSDCDG00000009522) ENSDCDG00000008431 TAF3 (ENSDCDG00000008384) Clupeiformes ANCESTRAL SPECIES 957 ENSGT00390000009047.b.e.b ##22 ENSGT01070000255793 Atlantic herring MODERN SPECIES 19 zc3h18 (ENSCHAG00000021492) ENSCHAG00000021457 gdpgp1 (ENSCHAG00000021439) ENSCHAG00000021421 rhcgb (ENSCHAG00000021162) POLG (ENSCHAG00000021087) fanci (ENSCHAG00000020519) ENSCHAG00000020499 FBXO31 (ENSCHAG00000020194) ENSCHAG00000019865 dhtkd1 (ENSCHAG00000019216) camk1db (ENSCHAG00000017326) ucmab (ENSCHAG00000017292) CDK17 (ENSCHAG00000016953) ELK3 (ENSCHAG00000016930) hal (ENSCHAG00000016631) ##22 ENSCHAG00000016579 metap2b (ENSCHAG00000016519) ENSCHAG00000016323 NR2C1 (ENSCHAG00000015983) ube2h (ENSCHAG00000015945) ENSCHAG00000015939 ENSCHAG00000015667 api5 (ENSCHAG00000015164) hsd17b12a (ENSCHAG00000014889) alkbh3 (ENSCHAG00000014876) si:ch1073-281m9.1 (ENSCHAG00000014870) ENSCHAG00000014861 ckmt1 (ENSCHAG00000014407) CATSPER2 (ENSCHAG00000014313) pdia3 (ENSCHAG00000014064) Denticle herring MODERN SPECIES 250 ENSDCDG00000009177 gcsha (ENSDCDG00000009152) ENSDCDG00000009094 si:dkey-30c15.13 (ENSDCDG00000009048) ENSDCDG00000008792 chid1 (ENSDCDG00000008779) gatd1 (ENSDCDG00000008771) cd151 (ENSDCDG00000008764) ENSDCDG00000008758 cracr2b (ENSDCDG00000008752) ENSDCDG00000008729 ucmab (ENSDCDG00000007936) camk1db (ENSDCDG00000007784) ucmab (ENSDCDG00000007765) ENSDCDG00000007749 ENSDCDG00000007744 ##22 ENSDCDG00000007741 ##22 ENSDCDG00000007668 ENSDCDG00000007663 cracr2b (ENSDCDG00000007656) ENSDCDG00000007655 cd151 (ENSDCDG00000007652) gatd1 (ENSDCDG00000007646) chid1 (ENSDCDG00000007548) ENSDCDG00000007502 si:dkey-30c15.13 (ENSDCDG00000007487) ENSDCDG00000007481 ENSDCDG00000011279 ENSDCDG00000011264 dhtkd1 (ENSDCDG00000009522) ENSDCDG00000008431 Otophysi ANCESTRAL SPECIES 31 ENSGT00940000155818 ENSGT00390000015066 ENSGT01040000240558.b ENSGT00940000156076.a.b.b.a ENSGT00940000156076.a.a.a.b.a.a ENSGT00940000162219 ENSGT00940000163235.E ENSGT00940000164871.b ENSGT00390000004737.b.b ENSGT00950000182885.A.a.f ENSGT00940000160684 ENSGT00940000156912.c.b ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00390000009047.b #22 ENSGT00940000162591 ENSGT00390000006043.p ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00940000160208 ENSGT00940000154555.e.a.a ENSGT00940000155347.a.a ENSGT00940000157971 ENSGT01000000214413.a.w ENSGT00940000180728 Cyprinoidei ANCESTRAL SPECIES 42 ENSGT00390000016718 ENSGT00950000182844.b.b.b.b ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000162219.w.a ENSGT00940000163235.E ENSGT00940000164871.b.e.b ENSGT00940000164871.a.a ENSGT00390000004737.b.b ENSGT00950000182885.A.a.f ENSGT00940000160684 ENSGT00940000156912.c.b ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00390000009047.b #22 ENSGT00940000162591 ENSGT00390000006043.p ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00940000160208 ENSGT00940000154555.e.a.a ENSGT00940000155347.a.a ENSGT00940000162556.G.c.a.b.c.a.b ENSGT00390000002251 ENSGT00530000063576.A Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 57 ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000162219.w.a ENSGT00940000163235.A.a.a.b ENSGT01040000240558.b ENSGT00940000162219.w.b ENSGT00940000164871.b.e.a ENSGT00940000164871.b.e.b.b ENSGT00390000004737.b.b.c ENSGT00950000182885.A.a.f.h ENSGT00940000160684.d ENSGT00940000156912.c.b.a ENSGT00950000183125.a.c ENSGT00940000156776.d.b.a.b ENSGT00390000011492.b.a ENSGT00390000009047.b.g #22 ENSGT00940000162591.b ENSGT00390000006043.p.a.a ENSGT00390000016223.p.b ENSGT00940000156152.e.a.b.b ENSGT00940000156124.c.b.a ENSGT00940000159837.b ENSGT00730000111696.b.a.a ENSGT00990000203615.a.a.a.a.b ENSGT00940000160208.k.b ENSGT00940000155347.a.a.a ENSGT00940000162556.G.c.a.b.c.a.b.a.b ENSGT00390000002251.c ENSGT00530000063576.A.i ENSGT00940000162677.r.a ENSGT00950000182857.a.a.b.b.d Goldfish MODERN SPECIES 17 ENSCARG00000030090 ENSCARG00000030071 ENSCARG00000029995 ENSCARG00000029981 ENSCARG00000029971 ENSCARG00000029903 ENSCARG00000029826 ENSCARG00000029600 ENSCARG00000029569 saal1 (ENSCARG00000029506) tph1a (ENSCARG00000024649) kcnc1b (ENSCARG00000024455) dhtkd1 (ENSCARG00000024195) camk1db (ENSCARG00000024665) ucmab (ENSCARG00000024642) hal (ENSCARG00000023503) #22 NOX5 (ENSCARG00000023357) glcea (ENSCARG00000023337) ambra1b (ENSCARG00000023018) ENSCARG00000023001 mdkb (ENSCARG00000022996) DGKZ (ENSCARG00000021484) PHF21A (ENSCARG00000021340) PRDM11 (ENSCARG00000021320) ENSCARG00000021314 ENSCARG00000021303 BET1L (ENSCARG00000021293) ENSCARG00000020010 ENSCARG00000019931 ENSCARG00000019927 ENSCARG00000019923 Cyprininae_a ANCESTRAL SPECIES 106 ENSGT00390000000453 ENSGT00390000005855 ENSGT00940000162219.w.a ENSGT00940000163235.E ENSGT00940000164871.b.e.b.a ENSGT00940000162219.w.b ENSGT00940000164871.b.e.a ENSGT00940000164871.b.e.b.b ENSGT00390000004737.b.b.c ENSGT00950000182885.A.a.f.h ENSGT00940000160684.d ENSGT00940000156912.c.b.a ENSGT00950000183125.a.c ENSGT00940000156776.d.b.a.b ENSGT00390000011492.b.a ENSGT00390000009047.b.g #22 ENSGT00940000162591.b ENSGT00390000006043.p.a.a ENSGT00390000016223.p.b ENSGT00940000156152.e.a.b.b ENSGT00940000156124.c.b.a ENSGT00940000159837.b ENSGT00730000111696.b.a.a ENSGT00990000203615.a.a.a.a.b ENSGT00940000160208.k.b ENSGT00940000155347.a.a.a ENSGT00940000162556.G.c.a.b.c.a.b.a.a.b ENSGT00390000002251.c ENSGT00530000063576.A.i ENSGT00940000162677.r.a ENSGT00950000182857.a.a.b.b.d Common carp reference MODERN SPECIES 37 ENSCCRG00000001784 fanci (ENSCCRG00000027970) ENSCCRG00000028000 ENSCCRG00000028010 ENSCCRG00000079784 ENSCCRG00000060778 ENSCCRG00000023938 ENSCCRG00000023953 saal1 (ENSCCRG00000052672) tph1a (ENSCCRG00000033540) SERGEF (ENSCCRG00000033550) kcnc1b (ENSCCRG00000071017) dhtkd1 (ENSCCRG00000005533) camk1db (ENSCCRG00000011202) ucmab (ENSCCRG00000056442) hal (ENSCCRG00000059267) #22 ENSCCRG00000011188 ambra1b (ENSCCRG00000011080) ENSCCRG00000081100 ENSCCRG00000014580 ENSCCRG00000014629 ENSCCRG00000045111 ENSCCRG00000045118 ENSCCRG00000061441 ENSCCRG00000074386 ENSCCRG00000010884 ptdss2 (ENSCCRG00000070588) ENSCCRG00000010867 ifitm5 (ENSCCRG00000010849) cat (ENSCCRG00000010864) syt12 (ENSCCRG00000060993) Golden-line barbel MODERN SPECIES 705 ENSSGRG00000027140 ENSSGRG00000027141 ENSSGRG00000027143 ENSSGRG00000027147 ENSSGRG00000027150 ENSSGRG00000027159 saal1 (ENSSGRG00000027314) tph1a (ENSSGRG00000027322) kcnc1b (ENSSGRG00000027395) dhtkd1 (ENSSGRG00000027399) camk1db (ENSSGRG00000027643) ucmab (ENSSGRG00000028992) hal (ENSSGRG00000029009) #22 NOX5 (ENSSGRG00000029705) glcea (ENSSGRG00000029716) ambra1b (ENSSGRG00000029719) ENSSGRG00000029721 mdkb (ENSSGRG00000029722) DGKZ (ENSSGRG00000029768) PHF21A (ENSSGRG00000031260) PRDM11 (ENSSGRG00000031263) ENSSGRG00000031264 ENSSGRG00000031265 BET1L (ENSSGRG00000031266) ENSSGRG00000031268 ENSSGRG00000031606 ENSSGRG00000031607 ENSSGRG00000031610 Cyprininae ANCESTRAL SPECIES 383 ENSGT00390000012559.i ENSGT00390000008679.f ENSGT00940000164760.d ENSGT00940000157220.b.e ENSGT01030000234638.b.b.c.a.c ENSGT00940000159320.f ENSGT00390000016718.a ENSGT00950000182844.b.b.b.b.b ENSGT00390000004737.b.b.d ENSGT00950000182885.A.a.f.g ENSGT00940000160684.c ENSGT00940000156912.c.b.b ENSGT00950000183125.a.d ENSGT00940000156776.d.b.a.a ENSGT00390000011492.b.b ENSGT00390000009047.b.h #22 ENSGT00940000162591.a ENSGT00390000006043.p.a.b ENSGT00390000016223.p.a ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b.a ENSGT00940000156124.c.b.b ENSGT00940000159837.a ENSGT00730000111696.b.a.b ENSGT00990000203615.a.a.a.a.a ENSGT00940000160208.k.a ENSGT00940000155347.a.a.b ENSGT00940000162556.G.c.a.b.c.a.b.b Cyprininae_a ANCESTRAL SPECIES 415 ENSGT00390000004737.b.b.d ENSGT00950000182885.A.a.f.g ENSGT00940000160684.c ENSGT00940000156912.c.b.b ENSGT00950000183125.a.d ENSGT00940000156776.d.b.a.a ENSGT00390000011492.b.b ENSGT00390000009047.b.h #22 ENSGT00940000162591.a ENSGT00390000006043.p.a.b ENSGT00390000016223.p.a ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b.a ENSGT00940000156124.c.b.b ENSGT00940000159837.a ENSGT00730000111696.b.a.b ENSGT00990000203615.a.a.a.a.a ENSGT00940000160208.k.a ENSGT00940000155347.a.a.b ENSGT00940000162556.G.c.a.b.c.a.b.b ENSGT00390000002251.d Golden-line barbel MODERN SPECIES 1369 kcnc1b (ENSSGRG00000018912) dhtkd1 (ENSSGRG00000018778) camk1db (ENSSGRG00000018775) ucmab (ENSSGRG00000018772) hal (ENSSGRG00000018752) #22 NOX5 (ENSSGRG00000018717) glcea (ENSSGRG00000018716) ambra1b (ENSSGRG00000018672) ENSSGRG00000018670 mdkb (ENSSGRG00000018668) DGKZ (ENSSGRG00000018589) PHF21A (ENSSGRG00000018497) PRDM11 (ENSSGRG00000018495) ENSSGRG00000018494 ENSSGRG00000018491 BET1L (ENSSGRG00000018489) ENSSGRG00000017881 Zebrafish MODERN SPECIES 17 gdpgp1 (ENSDARG00000097155) rhcgb (ENSDARG00000100265) POLG (ENSDARG00000060951) fanci (ENSDARG00000026224) ENSDARG00000058556 ENSDARG00000070331 ENSDARG00000078994 ENSDARG00000100621 saal1 (ENSDARG00000018681) tph1a (ENSDARG00000029432) SERGEF (ENSDARG00000070986) kcnc1b (ENSDARG00000032959) dhtkd1 (ENSDARG00000016415) camk1db (ENSDARG00000017446) ucmab (ENSDARG00000005485) hal (ENSDARG00000017444) #22 NOX5 (ENSDARG00000079773) glcea (ENSDARG00000005095) ambra1b (ENSDARG00000039878) ENSDARG00000017722 mdkb (ENSDARG00000020708) DGKZ (ENSDARG00000076025) PHF21A (ENSDARG00000021378) PRDM11 (ENSDARG00000074468) ENSDARG00000089255 kcnj11l (ENSDARG00000031438) bet1l (ENSDARG00000032037) arpp19b (ENSDARG00000039880) ENSDARG00000025218 ENSDARG00000029232 ENSDARG00000032650 Characiphysae ANCESTRAL SPECIES 6 ENSGT00940000155818 ENSGT00390000015066 ENSGT01040000240558.b ENSGT00940000156076.a.b.b.a ENSGT00940000156076.a.a.a.b.a.a ENSGT00940000162219 ENSGT00940000163235.E ENSGT00940000164871.b ENSGT00390000004737.b.b ENSGT00950000182885.A.a.f ENSGT00940000160684 ENSGT00940000156912.c.b ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00390000009047.b #22 ENSGT00940000162591 ENSGT00390000006043.p ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00940000160208.m ENSGT00940000154555.e.a.a ENSGT00940000155347.a.a ENSGT00940000157971.fb ENSGT01000000214413.a.w ENSGT00950000182838.C ENSGT00840000129915.a Channel catfish DUPLICATION Channel catfish DUPLICATION Channel catfish MODERN SPECIES 10 tmtc2 (ENSIPUG00000017846) mettl25 (ENSIPUG00000017885) ccdc59 (ENSIPUG00000017904) ENSIPUG00000017914 prmt8b (ENSIPUG00000017953) tspan11 (ENSIPUG00000017969) sema3aa (ENSIPUG00000018003) ENSIPUG00000018139 ankrd16 (ENSIPUG00000018183) #27 gdi2 (ENSIPUG00000018222) #26 asb13a.1 (ENSIPUG00000018238) Asb13 (ENSIPUG00000018243) #25 net1 (ENSIPUG00000018277) MKLN1 (ENSIPUG00000018367) #23 ENSIPUG00000018433 #22 ENSIPUG00000018506 #22 stab2 (ENSIPUG00000018534) parietopsin (ENSIPUG00000018718) wnt16 (ENSIPUG00000018744) cped1 (ENSIPUG00000018748) ing3 (ENSIPUG00000018763) tspan12 (ENSIPUG00000018794) kcnd2 (ENSIPUG00000018815) ENSIPUG00000018841 FLNC (ENSIPUG00000018871) ENSIPUG00000018943 ddx46 (ENSIPUG00000018977) naf1 (ENSIPUG00000019009) hsp90b1 (ENSIPUG00000019031) #16 glt8d2 (ENSIPUG00000019094) #18 fbxo18 (ENSIPUG00000019144) #19 Channel catfish MODERN SPECIES 5 GTF2H1 (ENSIPUG00000010708) ENSIPUG00000010695 ENSIPUG00000010681 ENSIPUG00000010658 ENSIPUG00000010640 ENSIPUG00000010610 ENSIPUG00000010588 ENSIPUG00000010574 saal1 (ENSIPUG00000010526) tph (ENSIPUG00000010464) sergef (ENSIPUG00000010447) kcnc1 (ENSIPUG00000010415) dhtkd1 (ENSIPUG00000010338) camk1db (ENSIPUG00000010303) ucma (ENSIPUG00000010284) hal (ENSIPUG00000010229) #22 nox5 (ENSIPUG00000010196) glcea (ENSIPUG00000010184) mdkb (ENSIPUG00000010158) ambra1b (ENSIPUG00000010044) DGKZ (ENSIPUG00000009929) PHF21A (ENSIPUG00000009766) ENSIPUG00000009746 prdm11 (ENSIPUG00000009718) ENSIPUG00000009711 ENSIPUG00000009686 bet1l (ENSIPUG00000009642) arpp19b (ENSIPUG00000009632) ENSIPUG00000009522 MYO5C (ENSIPUG00000009435) GNB5 (ENSIPUG00000009385) Characoidei ANCESTRAL SPECIES 65 ENSGT00940000163235.A.b.a.b ENSGT00940000162219 ENSGT00940000163235.E ENSGT00940000164871.b ENSGT00390000004737.b.b ENSGT00950000182885.A.a.f ENSGT00940000160684 ENSGT00940000166466.e.a ENSGT00940000156912.c.b ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00390000009047.b #22 ENSGT00940000162591 ENSGT00390000006043.p ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00940000160208.m ENSGT00940000154555.e.a.a ENSGT00940000155347.a.a ENSGT00940000157971.fb ENSGT01000000214413.a.w ENSGT00950000182838.C ENSGT00840000129915.a Red-bellied piranha MODERN SPECIES 122 ENSPNAG00000007703 ENSPNAG00000007693 ENSPNAG00000007682 ENSPNAG00000000396 ENSPNAG00000000392 ENSPNAG00000007663 ENSPNAG00000007656 saal1 (ENSPNAG00000007645) tph1a (ENSPNAG00000007639) SERGEF (ENSPNAG00000000372) ENSPNAG00000007633 kcnc1b (ENSPNAG00000000367) dhtkd1 (ENSPNAG00000000360) camk1db (ENSPNAG00000000352) ucmab (ENSPNAG00000007616) hal (ENSPNAG00000007611) #22 NOX5 (ENSPNAG00000007601) glcea (ENSPNAG00000000328) ambra1b (ENSPNAG00000007590) mdkb (ENSPNAG00000007574) DGKZ (ENSPNAG00000000309) PHF21A (ENSPNAG00000005288) PRDM11 (ENSPNAG00000007519) ENSPNAG00000000258 ENSPNAG00000007512 BET1L (ENSPNAG00000007193) arpp19b (ENSPNAG00000000251) ENSPNAG00000000241 MYO5C (ENSPNAG00000000224) gnb5a (ENSPNAG00000007476) AP4E1 (ENSPNAG00000007474) Mexicana tetra DUPLICATION Electric eel DUPLICATION Electric eel MODERN SPECIES 357 tmtc2a (ENSEEEG00000023640) mettl25 (ENSEEEG00000023641) ccdc59 (ENSEEEG00000023643) CRACR2A (ENSEEEG00000023645) prmt8b (ENSEEEG00000023648) tspan11 (ENSEEEG00000023650) sema3aa (ENSEEEG00000023651) ENSEEEG00000023653 ankrd16 (ENSEEEG00000023654) #27 gdi2 (ENSEEEG00000023667) #26 asb13a.1 (ENSEEEG00000023796) ENSEEEG00000023799 #25 net1 (ENSEEEG00000023805) mkln1 (ENSEEEG00000023840) #23 podxl (ENSEEEG00000023847) ENSEEEG00000000297 #22 Euteleosteomorpha ANCESTRAL SPECIES 21 ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158078 #18 ENSGT00940000153969.a #27 ENSGT00950000182994.B.a.b #26 ENSGT00940000160326.c.b ENSGT00940000165059.B.b #25 ENSGT00940000160592 ENSGT00940000160326.c.a ENSGT00940000155849.h ENSGT00390000001702 #23 ENSGT00730000111314 ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000154917 ENSGT00940000160180 ENSGT00940000159167 ENSGT00950000183042.a.b.a ENSGT00940000165155 ENSGT00940000158018 ENSGT00390000011355.b ENSGT00940000153185.a.a.a ENSGT00390000007681.b.a.b ENSGT00390000013629 ENSGT00940000158662 ENSGT00940000155662.e.a ENSGT00390000006760 ENSGT00940000175378 ENSGT00940000153678.a.a Cod MODERN SPECIES 22 ldha (ENSGMOG00000012687) tsg101a (ENSGMOG00000012693) ENSGMOG00000012695 ENSGMOG00000034679 ENSGMOG00000010126 ENSGMOG00000010137 ENSGMOG00000028664 ENSGMOG00000025316 ENSGMOG00000033453 ENSGMOG00000010163 dhtkd1 (ENSGMOG00000010176) camk1db (ENSGMOG00000010199) ENSGMOG00000035405 CDK17 (ENSGMOG00000010215) ELK3 (ENSGMOG00000033543) hal (ENSGMOG00000010242) #22 ENSGMOG00000013409 ENSGMOG00000003407 ENSGMOG00000023944 ENSGMOG00000003418 ENSGMOG00000003430 ENSGMOG00000003460 ENSGMOG00000015342 KIF21A (ENSGMOG00000016941) slc2a13b (ENSGMOG00000016924) lrrk2 (ENSGMOG00000016854) SLC6A15 (ENSGMOG00000016828) ENSGMOG00000007917 RASSF9 (ENSGMOG00000036984) ENSGMOG00000009455 ENSGMOG00000009445 Pinecone sodierfish MODERN SPECIES 20 ldhbb (ENSMMDG00005022017) ENSMMDG00005022014 golt1bb (ENSMMDG00005022012) slc35b4 (ENSMMDG00005022002) ENSMMDG00005022000 NET1 (ENSMMDG00005021777) ASB13 (ENSMMDG00005021741) ENSMMDG00005021734 taf3 (ENSMMDG00005021729) CELF2 (ENSMMDG00005021649) dhtkd1 (ENSMMDG00005021586) camk1db (ENSMMDG00005021114) ucmab (ENSMMDG00005021084) CDK17 (ENSMMDG00005018465) elk3 (ENSMMDG00005018420) hal (ENSMMDG00005018417) #22 zgc:101783 (ENSMMDG00005018413) hsd17b12a (ENSMMDG00005018395) alkbh3 (ENSMMDG00005018388) ENSMMDG00005018384 si:ch1073-281m9.1 (ENSMMDG00005018383) ENSMMDG00005018380 ckmt1 (ENSMMDG00005018331) pdia3 (ENSMMDG00005018245) ENSMMDG00005018236 rlbp1b (ENSMMDG00005018231) ABHD2 (ENSMMDG00005018226) mfge8b (ENSMMDG00005018074) hapln3 (ENSMMDG00005018067) ENSMMDG00005018062 PPIP5K1 (ENSMMDG00005016687) Percomorphaceae ANCESTRAL SPECIES 19 ENSGT01070000253775.a.d.a.a.a.b.g.a ENSGT00510000047522 ENSGT00390000009899.b.m #12 ENSGT00940000155263 #13 ENSGT00940000154380.a.a.b ##14 ENSGT00940000158078 #18 ENSGT00940000153969.a #27 ENSGT00950000182994.B.a.b #26 ENSGT00940000160326.c.b ENSGT00940000165059.B.b #25 ENSGT00940000160592 ENSGT00940000160326.c.a ENSGT00940000155849.h ENSGT00390000001702 #23 ENSGT00730000111314 ENSGT00390000009047.b #22 ENSGT00940000154917 ENSGT00940000160180 ENSGT00940000159167 ENSGT00950000183042.a.b.a ENSGT00940000165155 ENSGT00940000158018 ENSGT00390000011355.b ENSGT00940000153185.a.a.a ENSGT00390000007681.b.a.b ENSGT00390000013629 ENSGT00940000158662 ENSGT00940000155662.e.a ENSGT00390000006760 ENSGT00940000175378 ENSGT00940000153678.a.a Tiger tail seahorse MODERN SPECIES 311 AP1S2 (ENSHCOG00000011153) ENSHCOG00000011158 ENSHCOG00000011165 ENSHCOG00000011176 KCNA1 (ENSHCOG00000011199) slc35b4 (ENSHCOG00000011230) NET1 (ENSHCOG00000011247) ENSHCOG00000011254 ##25 ENSHCOG00000011261 TAF3 (ENSHCOG00000011307) ENSHCOG00000011353 dhtkd1 (ENSHCOG00000011402) camk1db (ENSHCOG00000011435) ucmab (ENSHCOG00000011464) ENSHCOG00000011468 hal (ENSHCOG00000011530) #22 FGD6 (ENSHCOG00000011545) nr2c1 (ENSHCOG00000011584) tmcc3 (ENSHCOG00000011605) ENSHCOG00000011620 ENSHCOG00000011631 ENSHCOG00000011649 ENSHCOG00000011678 ENSHCOG00000011706 parietopsin (ENSHCOG00000011717) NT5DC3 (ENSHCOG00000011744) hsp90b1 (ENSHCOG00000011791) #16 ENSHCOG00000011864 hbp1 (ENSHCOG00000011877) GPR22 (ENSHCOG00000011890) idh2 (ENSHCOG00000011933) Percomorphaceae_B ANCESTRAL SPECIES 5 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Percomorphaceae_C ANCESTRAL SPECIES 5 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Eupercaria ANCESTRAL SPECIES 6 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Tetraodontidae ANCESTRAL SPECIES 11 ENSGT00390000004933.k.b ENSGT00940000154098.a.e ENSGT00940000153525.i.b ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Fugu MODERN SPECIES 21 pthlhb (ENSTRUG00000016866) tmpob (ENSTRUG00000028971) ldhbb (ENSTRUG00000016868) golt1bb (ENSTRUG00000016875) slc35b4 (ENSTRUG00000016876) ENSTRUG00000016881 NET1 (ENSTRUG00000016882) ASB13 (ENSTRUG00000028781) ENSTRUG00000024331 taf3 (ENSTRUG00000016902) CELF2 (ENSTRUG00000016905) dhtkd1 (ENSTRUG00000016922) ENSTRUG00000016926 CDK17 (ENSTRUG00000016933) elk3 (ENSTRUG00000016937) hal (ENSTRUG00000016943) #22 ENSTRUG00000016951 ENSTRUG00000016953 ENSTRUG00000029085 FGD6 (ENSTRUG00000016956) nr2c1 (ENSTRUG00000016957) tmcc3 (ENSTRUG00000016961) ENSTRUG00000016962 FLNC (ENSTRUG00000016964) ENSTRUG00000016975 parietopsin (ENSTRUG00000016978) NT5DC3 (ENSTRUG00000016979) hsp90b1 (ENSTRUG00000016985) #16 PRKAR2B (ENSTRUG00000016988) hbp1 (ENSTRUG00000016990) GPR22 (ENSTRUG00000019790) Tetraodon MODERN SPECIES 4 zgc:136858 (ENSTNIG00000015999) CNOT4 (ENSTNIG00000016000) KCNA1 (ENSTNIG00000016001) pthlhb (ENSTNIG00000016002) tmpob (ENSTNIG00000016003) ldhbb (ENSTNIG00000016004) slc35b4 (ENSTNIG00000016005) NET1 (ENSTNIG00000016006) ASB13 (ENSTNIG00000016007) taf3 (ENSTNIG00000016008) ENSTNIG00000016009 dhtkd1 (ENSTNIG00000016010) CAMK1D (ENSTNIG00000016011) CDK17 (ENSTNIG00000016012) elk3 (ENSTNIG00000016013) hal (ENSTNIG00000016014) #22 NTN4 (ENSTNIG00000016015) ENSTNIG00000016016 ENSTNIG00000016017 nr2c1 (ENSTNIG00000016018) tmcc3 (ENSTNIG00000016019) FLNC (ENSTNIG00000016020) ENSTNIG00000016021 ENSTNIG00000016022 parietopsin (ENSTNIG00000016023) NT5DC3 (ENSTNIG00000016024) hsp90b1 (ENSTNIG00000016025) #16 PRKAR2B (ENSTNIG00000016026) hbp1 (ENSTNIG00000016027) GPR22 (ENSTNIG00000016028) BCAP29 (ENSTNIG00000016029) Eupecaria_A ANCESTRAL SPECIES 7 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Ballan wrasse MODERN SPECIES 15 tmpob (ENSLBEG00000010183) ldhbb (ENSLBEG00000010213) golt1bb (ENSLBEG00000010261) slc35b4 (ENSLBEG00000010300) NET1 (ENSLBEG00000010330) ASB13 (ENSLBEG00000010349) ENSLBEG00000010411 ENSLBEG00000010478 taf3 (ENSLBEG00000010517) CELF2 (ENSLBEG00000010618) dhtkd1 (ENSLBEG00000010875) camk1db (ENSLBEG00000010981) ucmab (ENSLBEG00000011025) CDK17 (ENSLBEG00000011044) elk3 (ENSLBEG00000011118) hal (ENSLBEG00000011172) #22 NTN4 (ENSLBEG00000011274) ENSLBEG00000011303 FGD6 (ENSLBEG00000011378) nr2c1 (ENSLBEG00000011498) tmcc3 (ENSLBEG00000011530) ENSLBEG00000011564 FLNC (ENSLBEG00000011618) ENSLBEG00000011748 parietopsin (ENSLBEG00000011812) NT5DC3 (ENSLBEG00000011838) hsp90b1 (ENSLBEG00000011920) #16 PRKAR2B (ENSLBEG00000012008) hbp1 (ENSLBEG00000012078) ENSLBEG00000012127 GPR22 (ENSLBEG00000012138) Eupecaria_B ANCESTRAL SPECIES 7 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Eupecaria_C ANCESTRAL SPECIES 6 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Gilthead seabream MODERN SPECIES 22 tmpob (ENSSAUG00010010532) ldhbb (ENSSAUG00010010530) golt1bb (ENSSAUG00010010527) slc35b4 (ENSSAUG00010010522) ENSSAUG00010010519 NET1 (ENSSAUG00010010076) ASB13 (ENSSAUG00010010064) ENSSAUG00010010062 taf3 (ENSSAUG00010010061) CELF2 (ENSSAUG00010008431) dhtkd1 (ENSSAUG00010007922) camk1db (ENSSAUG00010005958) ucmab (ENSSAUG00010005929) CDK17 (ENSSAUG00010004339) elk3 (ENSSAUG00010004266) hal (ENSSAUG00010004129) #22 NTN4 (ENSSAUG00010023323) ENSSAUG00010023229 ENSSAUG00010023226 FGD6 (ENSSAUG00010023143) nr2c1 (ENSSAUG00010023068) tmcc3 (ENSSAUG00010023062) ENSSAUG00010023061 ENSSAUG00010023056 FLNC (ENSSAUG00010021900) ENSSAUG00010021827 ENSSAUG00010021824 parietopsin (ENSSAUG00010021821) NT5DC3 (ENSSAUG00010021219) hsp90b1 (ENSSAUG00010019513) #16 PRKAR2B (ENSSAUG00010021151) Eupercaria_incertae_sedis ANCESTRAL SPECIES 4 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b European seabass DUPLICATION European seabass MODERN SPECIES 23 PSMC2 (ENSDLAG00005025389) SLC26A5 (ENSDLAG00005025288) ENSDLAG00005025053 ENSDLAG00005024803 ENSDLAG00005032906 PPP6R2 (ENSDLAG00005024674) #12 ENSDLAG00005021383 #13 ADM2 (ENSDLAG00005027615) ##14 ENSDLAG00005021219 ENSDLAG00005021218 ENSDLAG00005021215 #18 gdi2 (ENSDLAG00005021059) #26 net1 (ENSDLAG00005020030) mkln1 (ENSDLAG00005019642) #23 podxl (ENSDLAG00005032023) ENSDLAG00005019255 #22 NFYB (ENSDLAG00005019184) TXNRD1 (ENSDLAG00005032740) SLC41A2 (ENSDLAG00005018705) nopchap1 (ENSDLAG00005028269) ALDH1L2 (ENSDLAG00005032346) samm50l (ENSDLAG00005016877) scube1 (ENSDLAG00005015242) MPPED1 (ENSDLAG00005029858) ENSDLAG00005034312 sult4a1 (ENSDLAG00005034804) pnpla3 (ENSDLAG00005015160) ttll12 (ENSDLAG00005014598) ENSDLAG00005012972 ENSDLAG00005030623 ENSDLAG00005012894 European seabass MODERN SPECIES 19 ENSDLAG00005024805 ldhbb (ENSDLAG00005024801) ENSDLAG00005026737 slc35b4 (ENSDLAG00005024790) ENSDLAG00005024797 ENSDLAG00005024786 ENSDLAG00005027271 ENSDLAG00005030538 ENSDLAG00005024668 ENSDLAG00005024663 ENSDLAG00005024582 dhtkd1 (ENSDLAG00005024548) camk1db (ENSDLAG00005024213) ucmab (ENSDLAG00005024188) ENSDLAG00005023500 hal (ENSDLAG00005023289) #22 ELK3 (ENSDLAG00005033254) ENSDLAG00005023281 ENSDLAG00005023245 FGD6 (ENSDLAG00005023189) NR2C1 (ENSDLAG00005023092) TMCC3 (ENSDLAG00005031421) ENSDLAG00005023071 ENSDLAG00005020828 ENSDLAG00005020761 ENSDLAG00005020758 ENSDLAG00005020725 ENSDLAG00005019816 #16 PRKAR2B (ENSDLAG00005019785) ENSDLAG00005019780 GPR22 (ENSDLAG00005027759) Large yellow croaker DUPLICATION Large yellow croaker MODERN SPECIES 491 slc26a5 (ENSLCRG00005022770) SLC26A3 (ENSLCRG00005022734) ENSLCRG00005022666 cbll1 (ENSLCRG00005022659) ppp6r2a (ENSLCRG00005022643) #12 sbf1 (ENSLCRG00005021972) #13 adm2a (ENSLCRG00005021937) ##14 glt8d2 (ENSLCRG00005021934) #18 ankrd16 (ENSLCRG00005021932) #27 gdi2 (ENSLCRG00005021914) #26 ENSLCRG00005021912 #25 asb13a.1 (ENSLCRG00005021911) net1 (ENSLCRG00005021902) mkln1 (ENSLCRG00005021897) #23 podxl (ENSLCRG00005021895) ENSLCRG00005021893 #22 nfybb (ENSLCRG00005021885) TXNRD1 (ENSLCRG00005021880) chst11 (ENSLCRG00005021879) SLC41A2 (ENSLCRG00005021699) nopchap1 (ENSLCRG00005021680) ALDH1L2 (ENSLCRG00005020682) samm50l (ENSLCRG00005020622) scube1 (ENSLCRG00005019774) MPPED1 (ENSLCRG00005019744) ENSLCRG00005019742 sult4a1 (ENSLCRG00005019741) pnpla3 (ENSLCRG00005019740) SNX4 (ENSLCRG00005019469) ttll12 (ENSLCRG00005019210) dennd5b (ENSLCRG00005016739) Large yellow croaker MODERN SPECIES 492 ENSLCRG00005012119 golt1bb (ENSLCRG00005012122) ENSLCRG00005012126 slc35b4 (ENSLCRG00005012164) ENSLCRG00005012168 NET1 (ENSLCRG00005012179) ASB13 (ENSLCRG00005013003) ENSLCRG00005013006 taf3 (ENSLCRG00005013007) CELF2 (ENSLCRG00005013013) dhtkd1 (ENSLCRG00005014070) camk1db (ENSLCRG00005014955) ucmab (ENSLCRG00005016031) CDK17 (ENSLCRG00005016060) elk3 (ENSLCRG00005017457) hal (ENSLCRG00005017471) #22 NTN4 (ENSLCRG00005018974) ENSLCRG00005018978 ENSLCRG00005019046 FGD6 (ENSLCRG00005019056) nr2c1 (ENSLCRG00005019069) tmcc3 (ENSLCRG00005019107) ENSLCRG00005019110 FLNC (ENSLCRG00005019128) ENSLCRG00005019349 parietopsin (ENSLCRG00005019350) NT5DC3 (ENSLCRG00005019354) hsp90b1 (ENSLCRG00005019706) #16 PRKAR2B (ENSLCRG00005019723) hbp1 (ENSLCRG00005019737) GPR22 (ENSLCRG00005019743) Perciformes ANCESTRAL SPECIES 7 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Perciformes_a ANCESTRAL SPECIES 7 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Channel bull blenny MODERN SPECIES 20 tmpob (ENSCGOG00000015003) ldhbb (ENSCGOG00000014963) golt1bb (ENSCGOG00000014935) slc35b4 (ENSCGOG00000014818) ENSCGOG00000014814 NET1 (ENSCGOG00000014282) ASB13 (ENSCGOG00000014265) ENSCGOG00000014250 taf3 (ENSCGOG00000014225) CELF2 (ENSCGOG00000014217) dhtkd1 (ENSCGOG00000013982) camk1db (ENSCGOG00000012275) ucmab (ENSCGOG00000012236) CDK17 (ENSCGOG00000009431) elk3 (ENSCGOG00000009292) hal (ENSCGOG00000009285) #22 NTN4 (ENSCGOG00000009282) ENSCGOG00000008971 FGD6 (ENSCGOG00000008784) nr2c1 (ENSCGOG00000008597) tmcc3 (ENSCGOG00000008588) ENSCGOG00000008574 FLNC (ENSCGOG00000004953) ENSCGOG00000004866 parietopsin (ENSCGOG00000004828) NT5DC3 (ENSCGOG00000003723) hsp90b1 (ENSCGOG00000023930) #16 PRKAR2B (ENSCGOG00000023884) hbp1 (ENSCGOG00000023876) GPR22 (ENSCGOG00000023875) ENSCGOG00000023873 Pike perch DUPLICATION Pike perch MODERN SPECIES 76 ENSSLUG00000012209 #22 nfybb (ENSSLUG00000012116) chst11 (ENSSLUG00000012110) SLC41A2 (ENSSLUG00000011145) nopchap1 (ENSSLUG00000011110) ENSSLUG00000011097 ENSSLUG00000011045 ENSSLUG00000010969 ENSSLUG00000010957 ENSSLUG00000010950 ALDH1L2 (ENSSLUG00000009723) samm50l (ENSSLUG00000008699) scube1 (ENSSLUG00000005438) MPPED1 (ENSSLUG00000005112) sult4a1 (ENSSLUG00000005101) pnpla3 (ENSSLUG00000005070) Pike perch MODERN SPECIES 6 ENSSLUG00000018100 golt1bb (ENSSLUG00000018091) slc35b4 (ENSSLUG00000018079) ENSSLUG00000018072 NET1 (ENSSLUG00000017249) ASB13 (ENSSLUG00000017185) ENSSLUG00000017160 taf3 (ENSSLUG00000017151) CELF2 (ENSSLUG00000017071) dhtkd1 (ENSSLUG00000016767) camk1db (ENSSLUG00000014408) ENSSLUG00000014294 ucmab (ENSSLUG00000014289) CDK17 (ENSSLUG00000012632) elk3 (ENSSLUG00000012565) hal (ENSSLUG00000012245) #22 NTN4 (ENSSLUG00000012220) ENSSLUG00000012149 ENSSLUG00000012131 FGD6 (ENSSLUG00000012125) nr2c1 (ENSSLUG00000011426) tmcc3 (ENSSLUG00000011383) ENSSLUG00000011379 FLNC (ENSSLUG00000009012) ENSSLUG00000008899 parietopsin (ENSSLUG00000008895) NT5DC3 (ENSSLUG00000007781) hsp90b1 (ENSSLUG00000006901) #16 PRKAR2B (ENSSLUG00000006548) hbp1 (ENSSLUG00000006164) GPR22 (ENSSLUG00000006141) Cottioidei ANCESTRAL SPECIES 6 ENSGT00940000154098.a.e ENSGT00940000153525.i.b ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b ENSGT00390000011863.d.a.b Stickleback MODERN SPECIES 14 pthlhb (ENSGACG00000004317) tmpob (ENSGACG00000004325) ldhbb (ENSGACG00000004329) golt1bb (ENSGACG00000004333) slc35b4 (ENSGACG00000004350) chchd3b (ENSGACG00000004357) NET1 (ENSGACG00000004380) ENSGACG00000004384 taf3 (ENSGACG00000004409) CELF2 (ENSGACG00000004426) dhtkd1 (ENSGACG00000004439) camk1db (ENSGACG00000004485) ucmab (ENSGACG00000004488) CDK17 (ENSGACG00000004498) elk3 (ENSGACG00000004521) hal (ENSGACG00000004528) #22 NTN4 (ENSGACG00000004555) ENSGACG00000004563 usp3 (ENSGACG00000004578) ENSGACG00000004593 CA12 (ENSGACG00000004596) MAN2C1 (ENSGACG00000004613) neil1 (ENSGACG00000004670) commd4 (ENSGACG00000004675) sema7a (ENSGACG00000004680) islr2 (ENSGACG00000004691) stra6 (ENSGACG00000004695) cyp11a1.1 (ENSGACG00000004713) stoml1 (ENSGACG00000004724) nr2e3 (ENSGACG00000004739) hexa (ENSGACG00000004744) Percomorphaceae_D ANCESTRAL SPECIES 5 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Anabantaria ANCESTRAL SPECIES 5 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Anabantoidei ANCESTRAL SPECIES 5 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Siamese fighting fish MODERN SPECIES 17 ldhbb (ENSBSLG00000020458) ENSBSLG00000020456 golt1bb (ENSBSLG00000020450) slc35b4 (ENSBSLG00000020433) ENSBSLG00000020430 NET1 (ENSBSLG00000020297) ASB13 (ENSBSLG00000020278) ENSBSLG00000020231 taf3 (ENSBSLG00000020218) ENSBSLG00000019755 dhtkd1 (ENSBSLG00000019355) camk1db (ENSBSLG00000019196) ucmab (ENSBSLG00000019179) CDK17 (ENSBSLG00000018827) elk3 (ENSBSLG00000018591) hal (ENSBSLG00000017437) #22 NTN4 (ENSBSLG00000017361) ENSBSLG00000017303 FGD6 (ENSBSLG00000017232) nr2c1 (ENSBSLG00000016765) tmcc3 (ENSBSLG00000016641) ENSBSLG00000015981 FLNC (ENSBSLG00000013552) ENSBSLG00000013050 ENSBSLG00000012819 parietopsin (ENSBSLG00000012804) NT5DC3 (ENSBSLG00000012397) hsp90b1 (ENSBSLG00000009587) #16 PRKAR2B (ENSBSLG00000009069) hbp1 (ENSBSLG00000008925) GPR22 (ENSBSLG00000008605) Carangaria_A ANCESTRAL SPECIES ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Yellowtail amberjack MODERN SPECIES 3156 ldhbb (ENSSLDG00000011256) ENSSLDG00000011239 golt1bb (ENSSLDG00000011218) slc35b4 (ENSSLDG00000011185) ENSSLDG00000011148 NET1 (ENSSLDG00000011066) ASB13 (ENSSLDG00000011026) ENSSLDG00000011000 taf3 (ENSSLDG00000010968) ENSSLDG00000010918 dhtkd1 (ENSSLDG00000010823) camk1db (ENSSLDG00000010767) ucmab (ENSSLDG00000010754) CDK17 (ENSSLDG00000010679) elk3 (ENSSLDG00000010634) hal (ENSSLDG00000010547) #22 NTN4 (ENSSLDG00000010492) ENSSLDG00000010462 FGD6 (ENSSLDG00000010386) nr2c1 (ENSSLDG00000010306) tmcc3 (ENSSLDG00000010263) ENSSLDG00000010225 FLNC (ENSSLDG00000009996) ENSSLDG00000009905 parietopsin (ENSSLDG00000009880) NT5DC3 (ENSSLDG00000009813) hsp90b1 (ENSSLDG00000009737) #16 PRKAR2B (ENSSLDG00000009697) hbp1 (ENSSLDG00000009669) Barramundi perch MODERN SPECIES 144 pthlhb (ENSLCAG00010021268) tmpob (ENSLCAG00010021266) ldhbb (ENSLCAG00010021256) golt1bb (ENSLCAG00010021252) slc35b4 (ENSLCAG00010021246) ENSLCAG00010021244 NET1 (ENSLCAG00010021242) ASB13 (ENSLCAG00010021238) ENSLCAG00010021230 taf3 (ENSLCAG00010021221) ENSLCAG00010021152 dhtkd1 (ENSLCAG00010021122) camk1db (ENSLCAG00010021106) ucmab (ENSLCAG00010021100) ENSLCAG00010021079 hal (ENSLCAG00010021059) #22 elk3 (ENSLCAG00010021044) NTN4 (ENSLCAG00010020988) ENSLCAG00010020935 ENSLCAG00010020927 FGD6 (ENSLCAG00010020917) nr2c1 (ENSLCAG00010020899) tmcc3 (ENSLCAG00010020893) ENSLCAG00010020890 FLNC (ENSLCAG00010020869) ENSLCAG00010020863 parietopsin (ENSLCAG00010020859) NT5DC3 (ENSLCAG00010020652) hsp90b1 (ENSLCAG00010020437) #16 PRKAR2B (ENSLCAG00010020400) hbp1 (ENSLCAG00010020388) Pleuronectoidei ANCESTRAL SPECIES ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b ENSGT00390000011863.d.a.b Tongue sole MODERN SPECIES 16 tmpob (ENSCSEG00000015206) ldhbb (ENSCSEG00000015220) golt1bb (ENSCSEG00000015217) slc35b4 (ENSCSEG00000015228) ENSCSEG00000015245 NET1 (ENSCSEG00000015257) ENSCSEG00000015274 ##25 ENSCSEG00000015294 taf3 (ENSCSEG00000015325) CELF2 (ENSCSEG00000015335) dhtkd1 (ENSCSEG00000015356) camk1db (ENSCSEG00000015376) ucmab (ENSCSEG00000015389) CDK17 (ENSCSEG00000015398) elk3 (ENSCSEG00000015413) hal (ENSCSEG00000015434) #22 NTN4 (ENSCSEG00000015470) ENSCSEG00000015493 FGD6 (ENSCSEG00000015505) nr2c1 (ENSCSEG00000015524) tmcc3 (ENSCSEG00000015533) ENSCSEG00000015540 Turbot MODERN SPECIES 1 tmpob (ENSSMAG00000022767) ldhbb (ENSSMAG00000008730) ENSSMAG00000031141 golt1bb (ENSSMAG00000008750) slc35b4 (ENSSMAG00000008776) ENSSMAG00000008847 ENSSMAG00000008859 ENSSMAG00000008921 ENSSMAG00000008976 ENSSMAG00000008985 dhtkd1 (ENSSMAG00000009022) camk1db (ENSSMAG00000009106) ucmab (ENSSMAG00000009152) CDK17 (ENSSMAG00000009167) ELK3 (ENSSMAG00000009145) hal (ENSSMAG00000009206) #22 ENSSMAG00000009282 ENSSMAG00000009301 FGD6 (ENSSMAG00000009329) NR2C1 (ENSSMAG00000009370) TMCC3 (ENSSMAG00000009419) ENSSMAG00000029429 ENSSMAG00000009476 ENSSMAG00000009730 ENSSMAG00000009754 ENSSMAG00000009771 ENSSMAG00000009810 #16 PRKAR2B (ENSSMAG00000009847) ENSSMAG00000009892 GPR22 (ENSSMAG00000009916) ENSSMAG00000009927 Ovalentaria ANCESTRAL SPECIES 7 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00940000164988 ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i Ovalentaria_B ANCESTRAL SPECIES 3 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00940000164988 ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i Pomacentridae ANCESTRAL SPECIES 1 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Pomacentridae_A ANCESTRAL SPECIES 9 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Amphiprion ANCESTRAL SPECIES 4 ENSGT00940000153525.i.b ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Orange clownfish MODERN SPECIES 18 ENSAPEG00000003636 ENSAPEG00000003598 golt1bb (ENSAPEG00000003576) slc35b4 (ENSAPEG00000003547) ENSAPEG00000003531 NET1 (ENSAPEG00000003520) ASB13 (ENSAPEG00000003486) ENSAPEG00000003407 taf3 (ENSAPEG00000003384) ENSAPEG00000003362 dhtkd1 (ENSAPEG00000003286) camk1db (ENSAPEG00000003225) ucmab (ENSAPEG00000003214) CDK17 (ENSAPEG00000003139) elk3 (ENSAPEG00000003108) hal (ENSAPEG00000003002) #22 NTN4 (ENSAPEG00000002975) ENSAPEG00000002926 FGD6 (ENSAPEG00000002847) nr2c1 (ENSAPEG00000002804) tmcc3 (ENSAPEG00000002771) ENSAPEG00000002736 FLNC (ENSAPEG00000002601) ENSAPEG00000002559 parietopsin (ENSAPEG00000002525) NT5DC3 (ENSAPEG00000002463) hsp90b1 (ENSAPEG00000002389) #16 PRKAR2B (ENSAPEG00000002341) hbp1 (ENSAPEG00000002330) GPR22 (ENSAPEG00000002313) ENSAPEG00000002297 Clown anemonefish MODERN SPECIES 686 ENSAOCG00000021705 ENSAOCG00000021717 golt1bb (ENSAOCG00000021734) slc35b4 (ENSAOCG00000021808) ENSAOCG00000021821 NET1 (ENSAOCG00000021860) ASB13 (ENSAOCG00000021904) ENSAOCG00000022012 taf3 (ENSAOCG00000022052) ENSAOCG00000022110 dhtkd1 (ENSAOCG00000022201) camk1db (ENSAOCG00000022243) ucmab (ENSAOCG00000001619) CDK17 (ENSAOCG00000002378) elk3 (ENSAOCG00000022341) hal (ENSAOCG00000022421) #22 Spiny chromis MODERN SPECIES 1285 taf3 (ENSAPOG00000008545) ENSAPOG00000008530 dhtkd1 (ENSAPOG00000008486) camk1db (ENSAPOG00000008429) ucmab (ENSAPOG00000008382) CDK17 (ENSAPOG00000008372) elk3 (ENSAPOG00000008354) hal (ENSAPOG00000008337) #22 NTN4 (ENSAPOG00000008236) Bicolor damselfish MODERN SPECIES 539 taf3 (ENSSPAG00000005681) ENSSPAG00000005647 ENSSPAG00000005632 dhtkd1 (ENSSPAG00000005584) camk1db (ENSSPAG00000005559) ucmab (ENSSPAG00000005552) CDK17 (ENSSPAG00000005501) elk3 (ENSSPAG00000005477) hal (ENSSPAG00000005437) #22 NTN4 (ENSSPAG00000005418) ENSSPAG00000005386 FGD6 (ENSSPAG00000005362) nr2c1 (ENSSPAG00000005336) tmcc3 (ENSSPAG00000005308) ENSSPAG00000005259 FLNC (ENSSPAG00000004974) ENSSPAG00000004913 parietopsin (ENSSPAG00000004893) NT5DC3 (ENSSPAG00000004854) hsp90b1 (ENSSPAG00000004796) #16 PRKAR2B (ENSSPAG00000004758) hbp1 (ENSSPAG00000004739) GPR22 (ENSSPAG00000004731) ENSSPAG00000004709 Cichlidae ANCESTRAL SPECIES 5 ENSGT00940000154098.a.e ENSGT00940000153525.i.b ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00940000164988 ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000154098.a.e ENSGT00940000153525.i.b ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00940000164988 ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i Haplochromini ANCESTRAL SPECIES ENSGT00940000154098.a.e ENSGT00940000153525.i.b ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00940000164988 ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Haplochromini_A ANCESTRAL SPECIES 1 ENSGT00940000154098.a.e ENSGT00940000153525.i.b ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000179695 ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00940000164988 ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i Haplochromini_B ANCESTRAL SPECIES 20 ENSGT00940000154098.a.e ENSGT00940000153525.i.b ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000179695 ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00940000164988 ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i Zebra mbuna MODERN SPECIES 1110 ldhbb (ENSMZEG00005007213) golt1bb (ENSMZEG00005007199) slc35b4 (ENSMZEG00005007167) chchd3b (ENSMZEG00005007147) NET1 (ENSMZEG00005007131) ASB13 (ENSMZEG00005007096) ENSMZEG00005007078 ENSMZEG00005007002 taf3 (ENSMZEG00005006990) CELF2 (ENSMZEG00005006950) dhtkd1 (ENSMZEG00005006901) camk1db (ENSMZEG00005006862) ucmab (ENSMZEG00005006830) CDK17 (ENSMZEG00005006744) elk3 (ENSMZEG00005006726) hal (ENSMZEG00005006684) #22 NTN4 (ENSMZEG00005006663) metap2a (ENSMZEG00005006651) ENSMZEG00005006598 ENSMZEG00005006551 nr2c1 (ENSMZEG00005006503) tmcc3 (ENSMZEG00005006496) ENSMZEG00005006481 FLNC (ENSMZEG00005006267) ENSMZEG00005006211 ENSMZEG00005006178 ENSMZEG00005006163 parietopsin (ENSMZEG00005006134) NT5DC3 (ENSMZEG00005006087) hsp90b1 (ENSMZEG00005006031) #16 PRKAR2B (ENSMZEG00005006013) Eastern happy MODERN SPECIES 19 ldhbb (ENSACLG00000002635) golt1bb (ENSACLG00000002654) slc35b4 (ENSACLG00000002691) ENSACLG00000002767 NET1 (ENSACLG00000002788) ASB13 (ENSACLG00000002808) ENSACLG00000002922 ENSACLG00000003054 taf3 (ENSACLG00000003059) CELF2 (ENSACLG00000003085) dhtkd1 (ENSACLG00000003133) camk1db (ENSACLG00000003189) ucmab (ENSACLG00000003214) CDK17 (ENSACLG00000003240) elk3 (ENSACLG00000003309) hal (ENSACLG00000003338) #22 NTN4 (ENSACLG00000003434) ENSACLG00000003520 FGD6 (ENSACLG00000004184) ENSACLG00000004217 nr2c1 (ENSACLG00000004287) tmcc3 (ENSACLG00000004348) ENSACLG00000004372 FLNC (ENSACLG00000004401) ENSACLG00000004537 ENSACLG00000004580 parietopsin (ENSACLG00000004601) NT5DC3 (ENSACLG00000004645) hsp90b1 (ENSACLG00000004667) #16 PRKAR2B (ENSACLG00000004727) hbp1 (ENSACLG00000004758) P. nyererei MODERN SPECIES 322 pthlhb (ENSPNYG00000004239) tmpob (ENSPNYG00000004229) ldhbb (ENSPNYG00000002953) golt1bb (ENSPNYG00000002882) slc35b4 (ENSPNYG00000002843) NET1 (ENSPNYG00000002745) ENSPNYG00000002707 ENSPNYG00000002636 taf3 (ENSPNYG00000002619) ENSPNYG00000002565 dhtkd1 (ENSPNYG00000002505) camk1db (ENSPNYG00000002468) ENSPNYG00000002450 CDK17 (ENSPNYG00000002270) elk3 (ENSPNYG00000002239) hal (ENSPNYG00000002173) #22 NTN4 (ENSPNYG00000002094) ENSPNYG00000001886 ENSPNYG00000001847 FGD6 (ENSPNYG00000001773) nr2c1 (ENSPNYG00000001713) tmcc3 (ENSPNYG00000001671) ENSPNYG00000001647 FLNC (ENSPNYG00000001480) ENSPNYG00000001455 ENSPNYG00000001444 parietopsin (ENSPNYG00000001411) NT5DC3 (ENSPNYG00000001368) hsp90b1 (ENSPNYG00000001316) #16 PRKAR2B (ENSPNYG00000001096) hbp1 (ENSPNYG00000001079) Lyretail cichlid MODERN SPECIES 293 tmpob (ENSNBRG00000021195) ldhbb (ENSNBRG00000021207) golt1bb (ENSNBRG00000021222) slc35b4 (ENSNBRG00000021280) ENSNBRG00000021304 NET1 (ENSNBRG00000021333) ASB13 (ENSNBRG00000021390) ENSNBRG00000021416 taf3 (ENSNBRG00000000296) CELF2 (ENSNBRG00000000322) dhtkd1 (ENSNBRG00000000369) camk1db (ENSNBRG00000000417) ucmab (ENSNBRG00000000463) CDK17 (ENSNBRG00000000488) elk3 (ENSNBRG00000000544) hal (ENSNBRG00000000566) #22 NTN4 (ENSNBRG00000000644) ENSNBRG00000000711 nr2c1 (ENSNBRG00000000757) tmcc3 (ENSNBRG00000000817) ENSNBRG00000000821 FLNC (ENSNBRG00000000849) ENSNBRG00000001024 parietopsin (ENSNBRG00000001046) NT5DC3 (ENSNBRG00000001091) hsp90b1 (ENSNBRG00000001148) #16 PRKAR2B (ENSNBRG00000001214) hbp1 (ENSNBRG00000001405) GPR22 (ENSNBRG00000001421) ENSNBRG00000001434 SLCO1C1 (ENSNBRG00000001456) Nile tilapia MODERN SPECIES 19 tmpob (ENSONIG00000032413) ldhbb (ENSONIG00000008643) golt1bb (ENSONIG00000008642) slc35b4 (ENSONIG00000030209) chchd3b (ENSONIG00000028078) NET1 (ENSONIG00000008633) ASB13 (ENSONIG00000008630) ENSONIG00000038590 taf3 (ENSONIG00000008628) CELF2 (ENSONIG00000008624) dhtkd1 (ENSONIG00000008620) camk1db (ENSONIG00000008609) ucmab (ENSONIG00000008606) CDK17 (ENSONIG00000008599) elk3 (ENSONIG00000008595) hal (ENSONIG00000008586) #22 NTN4 (ENSONIG00000008581) ENSONIG00000042951 ENSONIG00000040874 FGD6 (ENSONIG00000008572) ENSONIG00000041455 nr2c1 (ENSONIG00000008566) tmcc3 (ENSONIG00000037000) ENSONIG00000008561 FLNC (ENSONIG00000008549) ENSONIG00000008547 parietopsin (ENSONIG00000008543) NT5DC3 (ENSONIG00000008537) hsp90b1 (ENSONIG00000008526) #16 PRKAR2B (ENSONIG00000041012) hbp1 (ENSONIG00000008523) Midas cichlid MODERN SPECIES 775 ENSACIG00000019612 lsm1 (ENSACIG00000019593) bag4 (ENSACIG00000019577) DUSP26 (ENSACIG00000019564) ENSACIG00000019551 NET1 (ENSACIG00000019531) ASB13 (ENSACIG00000019504) ENSACIG00000019430 taf3 (ENSACIG00000019422) CELF2 (ENSACIG00000019405) dhtkd1 (ENSACIG00000019377) camk1db (ENSACIG00000019344) ucmab (ENSACIG00000019335) CDK17 (ENSACIG00000019321) elk3 (ENSACIG00000019311) hal (ENSACIG00000019291) #22 NTN4 (ENSACIG00000019270) ENSACIG00000019253 FGD6 (ENSACIG00000019200) nr2c1 (ENSACIG00000019177) tmcc3 (ENSACIG00000019166) FLNC (ENSACIG00000019099) ENSACIG00000019088 parietopsin (ENSACIG00000019059) NT5DC3 (ENSACIG00000019036) hsp90b1 (ENSACIG00000019012) #16 PRKAR2B (ENSACIG00000018924) hbp1 (ENSACIG00000018873) GPR22 (ENSACIG00000018863) ENSACIG00000018852 SLCO1C1 (ENSACIG00000018812) Atherinomorphae ANCESTRAL SPECIES 5 ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00900000143702 ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00940000164988 ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Oryzias ANCESTRAL SPECIES 16 ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00900000143702 ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00940000164988 ENSGT00390000009609 ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Oryzias_a ANCESTRAL SPECIES 1 ENSGT00940000154098.a.e ENSGT00940000153525.i.b ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000165059.B.a ##25 ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00940000179681 ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b ENSGT00390000011863.d.a.b Chinese medaka MODERN SPECIES 766 pthlhb (ENSOSIG00000016689) tmpob (ENSOSIG00000016688) ldhbb (ENSOSIG00000016681) slc35b4 (ENSOSIG00000016673) chchd3b (ENSOSIG00000016670) NET1 (ENSOSIG00000014457) ENSOSIG00000014445 ##25 ENSOSIG00000014442 taf3 (ENSOSIG00000014441) ENSOSIG00000014185 dhtkd1 (ENSOSIG00000014180) camk1db (ENSOSIG00000013772) ucmab (ENSOSIG00000013757) CDK17 (ENSOSIG00000011158) elk3 (ENSOSIG00000011142) hal (ENSOSIG00000011141) #22 ENSOSIG00000011138 ENSOSIG00000011136 FGD6 (ENSOSIG00000011131) nr2c1 (ENSOSIG00000011085) tmcc3 (ENSOSIG00000011081) ENSOSIG00000011080 FLNC (ENSOSIG00000010344) ENSOSIG00000010331 ENSOSIG00000010329 NT5DC3 (ENSOSIG00000009751) PRKAR2B (ENSOSIG00000009266) hsp90b1 (ENSOSIG00000009242) #16 GPR22 (ENSOSIG00000009240) ENSOSIG00000009239 SLCO1C1 (ENSOSIG00000009209) Japanese Medaka HdrR MODERN SPECIES 20 ldhbb (ENSORLG00000022136) ENSORLG00000023935 golt1bb (ENSORLG00000003792) slc35b4 (ENSORLG00000003802) chchd3b (ENSORLG00000003836) ENSORLG00000003844 ENSORLG00000003855 ##25 ENSORLG00000022050 taf3 (ENSORLG00000003878) ENSORLG00000003894 dhtkd1 (ENSORLG00000003925) camk1db (ENSORLG00000003942) ucmab (ENSORLG00000003954) CDK17 (ENSORLG00000004015) elk3 (ENSORLG00000004030) hal (ENSORLG00000004075) #22 ENSORLG00000004087 ENSORLG00000027162 FGD6 (ENSORLG00000004093) nr2c1 (ENSORLG00000004114) TMCC3 (ENSORLG00000004122) ENSORLG00000004131 flnc (ENSORLG00000004247) ENSORLG00000004270 ENSORLG00000029958 NT5DC3 (ENSORLG00000004304) hsp90b1 (ENSORLG00000004360) #16 PRKAR2B (ENSORLG00000004379) ENSORLG00000024832 hbp1 (ENSORLG00000004396) GPR22 (ENSORLG00000004399) Oryzias_b ANCESTRAL SPECIES ENSGT00940000177912 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00900000143702 ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00390000009609 ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b ENSGT00390000011863.d.a.b Indian medaka MODERN SPECIES 15 pthlhb (ENSOMEG00000011153) tmpob (ENSOMEG00000011188) ldhbb (ENSOMEG00000011239) slc35b4 (ENSOMEG00000011299) chchd3b (ENSOMEG00000011347) NET1 (ENSOMEG00000011397) ASB13 (ENSOMEG00000011447) ENSOMEG00000011532 taf3 (ENSOMEG00000011560) CELF2 (ENSOMEG00000000277) dhtkd1 (ENSOMEG00000011851) camk1db (ENSOMEG00000011942) ucmab (ENSOMEG00000011956) CDK17 (ENSOMEG00000012073) elk3 (ENSOMEG00000000296) hal (ENSOMEG00000012162) #22 ENSOMEG00000012191 ENSOMEG00000012223 FGD6 (ENSOMEG00000012279) nr2c1 (ENSOMEG00000012344) tmcc3 (ENSOMEG00000012371) ENSOMEG00000012413 FLNC (ENSOMEG00000012486) ENSOMEG00000012553 ENSOMEG00000001004 NT5DC3 (ENSOMEG00000000323) hsp90b1 (ENSOMEG00000012784) #16 hbp1 (ENSOMEG00000012837) GPR22 (ENSOMEG00000012859) ENSOMEG00000012876 SLCO1C1 (ENSOMEG00000012946) Javanese ricefish MODERN SPECIES 20 golt1bb (ENSOJAG00000000317) ENSOJAG00000000331 slc35b4 (ENSOJAG00000000339) chchd3b (ENSOJAG00000000345) NET1 (ENSOJAG00000000422) ASB13 (ENSOJAG00000000509) ENSOJAG00000000519 ENSOJAG00000000543 taf3 (ENSOJAG00000000551) CELF2 (ENSOJAG00000000606) dhtkd1 (ENSOJAG00000000701) camk1db (ENSOJAG00000000859) ucmab (ENSOJAG00000001108) CDK17 (ENSOJAG00000001260) elk3 (ENSOJAG00000001712) hal (ENSOJAG00000001751) #22 NTN4 (ENSOJAG00000001787) METAP2 (ENSOJAG00000001805) FGD6 (ENSOJAG00000001856) nr2c1 (ENSOJAG00000001906) tmcc3 (ENSOJAG00000002050) ENSOJAG00000002076 ENSOJAG00000002396 NT5DC3 (ENSOJAG00000002638) hsp90b1 (ENSOJAG00000003367) #16 PRKAR2B (ENSOJAG00000004869) hbp1 (ENSOJAG00000004936) GPR22 (ENSOJAG00000005047) ENSOJAG00000005073 SLCO1C1 (ENSOJAG00000005089) PDE3A (ENSOJAG00000005103) Cyprinodontiformes ANCESTRAL SPECIES 6 ENSGT00940000153525.i.b ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00900000143702 ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00940000164988 ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Cyprinodontoidei ANCESTRAL SPECIES 7 ENSGT01050000248182 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00900000143702 ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00940000164988 ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Poeciliinae ANCESTRAL SPECIES 3 ENSGT01050000248182 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000165059.B.a ##25 ENSGT00530000063735.b ENSGT00900000143702 ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00940000164988 ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Poecilia ANCESTRAL SPECIES 5 ENSGT01050000248182 ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000165059.B.a ##25 ENSGT00530000063735.b ENSGT00900000143702 ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00940000164988 ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b NAME_6 ANCESTRAL SPECIES 31 ENSGT00940000154098.a.e ENSGT00940000153525.i.b ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000165059.B.a ##25 ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00940000164988 ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01050000244841.A.b.b.a.b Sailfin molly MODERN SPECIES 175 ldhbb (ENSPLAG00000021395) ENSPLAG00000021484 golt1bb (ENSPLAG00000021490) slc35b4 (ENSPLAG00000021526) chchd3b (ENSPLAG00000021530) NET1 (ENSPLAG00000021536) ENSPLAG00000021554 ##25 ENSPLAG00000021559 taf3 (ENSPLAG00000021566) CELF2 (ENSPLAG00000021601) dhtkd1 (ENSPLAG00000021623) camk1db (ENSPLAG00000021640) ucmab (ENSPLAG00000021648) CDK17 (ENSPLAG00000021676) elk3 (ENSPLAG00000021682) hal (ENSPLAG00000021722) #22 NTN4 (ENSPLAG00000021727) ENSPLAG00000021752 ENSPLAG00000021759 Amazon molly MODERN SPECIES 655 ENSPFOG00000013252 ##25 ENSPFOG00000013205 taf3 (ENSPFOG00000013168) CELF2 (ENSPFOG00000013076) dhtkd1 (ENSPFOG00000012901) camk1db (ENSPFOG00000012864) ucmab (ENSPFOG00000012847) CDK17 (ENSPFOG00000012544) elk3 (ENSPFOG00000012473) hal (ENSPFOG00000012377) #22 NTN4 (ENSPFOG00000012291) ENSPFOG00000012168 FGD6 (ENSPFOG00000012107) nr2c1 (ENSPFOG00000012037) tmcc3 (ENSPFOG00000012011) ENSPFOG00000012007 FLNC (ENSPFOG00000011440) ENSPFOG00000021885 Platyfish MODERN SPECIES 11 ENSXMAG00000029981 ldhbb (ENSXMAG00000016966) golt1bb (ENSXMAG00000016953) slc35b4 (ENSXMAG00000016942) chchd3b (ENSXMAG00000016927) NET1 (ENSXMAG00000016906) ENSXMAG00000016891 ##25 ENSXMAG00000026792 taf3 (ENSXMAG00000016881) CELF2 (ENSXMAG00000016859) dhtkd1 (ENSXMAG00000016835) camk1db (ENSXMAG00000026212) ucmab (ENSXMAG00000016795) CDK17 (ENSXMAG00000016770) elk3 (ENSXMAG00000016767) hal (ENSXMAG00000016734) #22 NTN4 (ENSXMAG00000016726) ENSXMAG00000016695 FGD6 (ENSXMAG00000016684) nr2c1 (ENSXMAG00000016651) tmcc3 (ENSXMAG00000016644) ENSXMAG00000016643 FLNC (ENSXMAG00000016525) ENSXMAG00000016505 ENSXMAG00000026933 parietopsin (ENSXMAG00000028800) NT5DC3 (ENSXMAG00000016490) hsp90b1 (ENSXMAG00000016460) #16 PRKAR2B (ENSXMAG00000024858) hbp1 (ENSXMAG00000016455) GPR22 (ENSXMAG00000019892) Mummichog MODERN SPECIES 2447 tmpob (ENSFHEG00000006728) ldhbb (ENSFHEG00000006831) golt1bb (ENSFHEG00000006866) slc35b4 (ENSFHEG00000006897) chchd3b (ENSFHEG00000006911) NET1 (ENSFHEG00000006961) ASB13 (ENSFHEG00000006982) ENSFHEG00000007086 taf3 (ENSFHEG00000007097) CELF2 (ENSFHEG00000007136) dhtkd1 (ENSFHEG00000007200) camk1db (ENSFHEG00000007245) ucmab (ENSFHEG00000007248) CDK17 (ENSFHEG00000007275) elk3 (ENSFHEG00000007293) hal (ENSFHEG00000007436) #22 NTN4 (ENSFHEG00000007555) metap2a (ENSFHEG00000007589) nr2c1 (ENSFHEG00000007642) tmcc3 (ENSFHEG00000007653) ENSFHEG00000007676 FLNC (ENSFHEG00000007823) ENSFHEG00000007849 parietopsin (ENSFHEG00000007890) NT5DC3 (ENSFHEG00000007940) hsp90b1 (ENSFHEG00000007987) #16 PRKAR2B (ENSFHEG00000008199) hbp1 (ENSFHEG00000008222) GPR22 (ENSFHEG00000008227) ENSFHEG00000008242 SLCO1C1 (ENSFHEG00000008278) Aplocheiloidei ANCESTRAL SPECIES 1 ENSGT00940000154098.a.e ENSGT00940000153525.i.b ENSGT00390000014507.a.a ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00710000106806 ENSGT00940000155461.E.o ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000167341 ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158160 ENSGT00390000011239.i ENSGT01030000234518.A.b ENSGT01050000244841.A.b.b.a.b ENSGT00390000011863.d.a.b ENSGT01080000257336.b.e.b.a.a.c Protacanthopterygii ANCESTRAL SPECIES 10 ENSGT00390000014507.a.a.g ENSGT00390000014507.a.a.h ENSGT00390000002915 ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b ENSGT00950000182994.B.a.b.pb #26 ENSGT00710000106806 ENSGT00940000155461.E ENSGT00950000183125.a ENSGT00940000156776.d.b.a ENSGT00390000011492.b ENSGT00940000155834.i.b ENSGT00940000157129.f.a ENSGT00390000009047.b #22 ENSGT00940000153110.B.f ENSGT00940000154818.e.b ENSGT00940000156615.b ENSGT00940000167341 ENSGT00940000156334.a.a ENSGT00940000158165 ENSGT00940000157275.b ENSGT00940000159122.g ENSGT00940000153588.a.a.b ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637 ENSGT01020000230401.b.a #16 ENSGT00940000158078 #18 ENSGT00940000153969.a #27 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 81 ENSGT00940000157098.i ENSGT00390000010948.l ENSGT00940000156749.j ENSGT00390000010760.e.a.a.b ENSGT00940000156189.a.b.f ENSGT00940000160790.c.a.a ENSGT00980000200490 ENSGT00940000169061 ENSGT00940000153969.a.e #27 ENSGT00950000182994.B.a.b.ob.a #26 ENSGT00940000160326.c.b.c.a ENSGT00940000160326.c.a.b ENSGT00940000155849.h.d ENSGT00390000001702.o #23 ENSGT00730000111314.e ENSGT00390000009047.b.y.a.a #22 ENSGT00940000154917.gb.a.a ENSGT00940000160180 ENSGT00940000159167 ENSGT00950000183042.a.b.a.g.a ENSGT00940000154917.gb.a.b ENSGT00940000159178.n ENSGT00940000156715.r ENSGT00940000157926.h ENSGT00940000156715.q.a ENSGT00940000155461.A.q.a ENSGT00940000159247.h ENSGT00390000006837 ENSGT00390000005903.t ENSGT00940000157945.j ENSGT00940000158317.f Huchen MODERN SPECIES 748 ENSHHUG00000000571 mkln1 (ENSHHUG00000000577) #23 ENSHHUG00000000679 ENSHHUG00000000690 #22 ENSHHUG00000000726 ENSHHUG00000000920 chst11 (ENSHHUG00000000945) ENSHHUG00000000956 ECHDC3 (ENSHHUG00000001138) usp6nl (ENSHHUG00000001144) celf2 (ENSHHUG00000001161) Salmoninae_a ANCESTRAL SPECIES 11 ENSGT00390000009899.b.m.e #12 ENSGT00940000155263.j #13 ENSGT00940000154380.a.a.b.b ##14 ENSGT00940000159729.k.a ENSGT00940000155591.i.a ENSGT00530000064216 ENSGT01020000230401.b.a.f.b #16 ENSGT00940000158078.h #18 ENSGT00940000153969.a.e #27 ENSGT00950000182994.B.a.b.ob.b #26 ENSGT00940000160326.c.b.c.b ENSGT00940000160326.c.a.a ENSGT00940000155849.h.c ENSGT00390000001702.p #23 ENSGT00730000111314.f ENSGT00390000009047.b.y.a.a #22 ENSGT00940000154917.gb.a.a ENSGT00950000183042.a.b.a.g.b ENSGT00940000157926.g ENSGT00940000156715.q.b ENSGT00940000155461.A.q.b ENSGT00940000159247.g ENSGT00390000006837.ab ENSGT00390000005903.s ENSGT00940000157945.i.a ENSGT00940000158317.e ENSGT00940000153920.a.a.b ENSGT00940000158123.z ENSGT00940000157638.h ENSGT00950000182835.d.b.c ENSGT00790000123099.g.b Oncorhynchus ANCESTRAL SPECIES 22 ENSGT00390000009899.b.m.e #12 ENSGT00940000155263.j #13 ENSGT00940000154380.a.a.b.b ##14 ENSGT00940000159729.k.a.c ENSGT00940000155591.i.a ENSGT00530000064216 ENSGT00940000158078.h #18 ENSGT00940000153969.a.e #27 ENSGT00950000182994.B.a.b.ob.b #26 ENSGT00940000160592 ENSGT00940000155849.h.c.a.a ENSGT00940000160326.c.a.a ENSGT00940000155849.h.c.a.b ENSGT00390000001702.p #23 ENSGT00730000111314.f ENSGT00390000009047.b.y.a.a #22 ENSGT00940000154917.gb.a.a ENSGT00950000183042.a.b.a.g.b ENSGT00940000157926.g ENSGT00940000156715.q.b ENSGT00990000211255 ENSGT00940000155461.A.q.b ENSGT00940000159247.g ENSGT00390000006837.ab ENSGT00390000005903.s ENSGT00940000157945.i.a ENSGT00940000158317.e.c ENSGT00940000153920.a.a.b ENSGT00940000158123.z ENSGT00940000157638.h ENSGT00950000182835.d.b.c Oncorhynchus_a ANCESTRAL SPECIES 31 ENSGT00390000009899.b.m.e #12 ENSGT00940000155263.j #13 ENSGT00940000154380.a.a.b.b ##14 ENSGT00940000159729.k.a.c ENSGT00940000155591.i.a ENSGT00530000064216 ENSGT00940000158078.h #18 ENSGT00940000153969.a.e #27 ENSGT00950000182994.B.a.b.ob.b #26 ENSGT00940000165059.B.b #25 ENSGT00940000160592 ENSGT00940000160326.c.a.a ENSGT00940000155849.h.c.a.b ENSGT00390000001702.p #23 ENSGT00730000111314.f ENSGT00390000009047.b.y.a.a #22 ENSGT00940000154917.gb.a.a ENSGT00950000183042.a.b.a.g.b ENSGT00940000157926.g ENSGT00940000156715.q.b ENSGT01050000247557 ENSGT00990000211255 ENSGT00940000155461.A.q.b ENSGT00940000159247.g ENSGT00390000006837.ab ENSGT00390000005903.s ENSGT00940000157945.i.a ENSGT00940000158317.e.c ENSGT00940000153920.a.a.b ENSGT00940000158123.z ENSGT00940000157638.h Chinook salmon MODERN SPECIES 8 ENSOTSG00005024829 ENSOTSG00005024827 slc26a4 (ENSOTSG00005024761) SLC26A3 (ENSOTSG00005021064) cbll1 (ENSOTSG00005021017) ppp6r2a (ENSOTSG00005020702) #12 sbf1 (ENSOTSG00005018573) #13 ADM2 (ENSOTSG00005018540) ##14 ankrd16 (ENSOTSG00005018539) #27 gdi2 (ENSOTSG00005017570) #26 ENSOTSG00005017562 asb13a.2 (ENSOTSG00005017561) net1 (ENSOTSG00005017544) mkln1 (ENSOTSG00005017500) #23 podxl (ENSOTSG00005017495) ENSOTSG00005016444 #22 ENSOTSG00005016427 ENSOTSG00005016423 chst11 (ENSOTSG00005016422) ENSOTSG00005016421 ENSOTSG00005016113 ECHDC3 (ENSOTSG00005016112) usp6nl (ENSOTSG00005016111) ENSOTSG00005016109 ENSOTSG00005016108 atp5f1c (ENSOTSG00005016107) kin (ENSOTSG00005016025) itih2 (ENSOTSG00005013557) ITIH5 (ENSOTSG00005013550) tmem110l (ENSOTSG00005013549) SFMBT2 (ENSOTSG00005013475) Coho salmon MODERN SPECIES 10 ppp6r2a (ENSOKIG00005010832) #12 sbf1 (ENSOKIG00005011652) #13 ADM2 (ENSOKIG00005022161) ##14 ENSOKIG00005022170 GSN (ENSOKIG00005022265) ENSOKIG00005024336 ENSOKIG00005024346 #18 ankrd16 (ENSOKIG00005024394) #27 gdi2 (ENSOKIG00005024445) #26 ENSOKIG00005024939 #25 asb13a.2 (ENSOKIG00005024974) net1 (ENSOKIG00005025011) ENSOKIG00005025493 mkln1 (ENSOKIG00005025512) #23 podxl (ENSOKIG00005025735) ENSOKIG00005025807 #22 ENSOKIG00005026725 ENSOKIG00005026783 ENSOKIG00005026806 ENSOKIG00005026859 ECHDC3 (ENSOKIG00005027687) usp6nl (ENSOKIG00005027732) ENSOKIG00005028216 ENSOKIG00005028232 celf2 (ENSOKIG00005028291) gata3 (ENSOKIG00005028765) atp5f1c (ENSOKIG00005028804) kin (ENSOKIG00005028911) itih2 (ENSOKIG00005029100) ITIH5 (ENSOKIG00005030986) tmem110l (ENSOKIG00005031019) Salmo ANCESTRAL SPECIES 46 ENSGT00510000047522.m.b ENSGT00390000009899.b.m.e #12 ENSGT00940000155263.j #13 ENSGT00940000154380.a.a.b.b ##14 ENSGT00940000159729.k.a ENSGT00530000064216 ENSGT01020000230401.b.a.f.b #16 ENSGT00940000158078.h #18 ENSGT00940000153969.a.e #27 ENSGT00950000182994.B.a.b.ob.b #26 ENSGT00940000160326.c.b.c.b ENSGT00940000160326.c.a.a ENSGT00940000155849.h.c ENSGT00390000001702.p #23 ENSGT00730000111314.f ENSGT00390000009047.b.y.a.a #22 ENSGT00940000154917.gb.a.a ENSGT01040000240385.A.b.b.a.b.a.a.a.a.a.a.a.b.a ENSGT00940000157926.g ENSGT00940000156715.q.b ENSGT00940000155461.A.q.b ENSGT00940000159247.g ENSGT00390000006837.ab ENSGT00390000005903.s ENSGT00940000157945.i.a ENSGT00940000158317.e ENSGT00940000153920.a.a.b ENSGT00940000158123.z ENSGT00940000157638.h ENSGT00950000182835.d.b.c ENSGT00790000123099.g.b Atlantic salmon MODERN SPECIES 8 PPP6R2 (ENSSSAG00000009470) #12 ENSSSAG00000007565 #13 ADM2 (ENSSSAG00000109452) ##14 ENSSSAG00000007491 ENSSSAG00000007476 ENSSSAG00000006333 #16 glt8d2 (ENSSSAG00000006054) #18 ankrd16 (ENSSSAG00000006002) #27 gdib (ENSSSAG00000078518) #26 asb13a.1 (ENSSSAG00000078603) asb13a.2 (ENSSSAG00000093457) net1 (ENSSSAG00000078437) mkln1 (ENSSSAG00000069559) #23 ENSSSAG00000120387 podxl (ENSSSAG00000078346) ENSSSAG00000077811 #22 ENSSSAG00000077778 ENSSSAG00000077759 ENSSSAG00000087157 s41a2 (ENSSSAG00000077367) ENSSSAG00000068580 usp6nl (ENSSSAG00000077324) ENSSSAG00000087596 celf2 (ENSSSAG00000077205) gata3 (ENSSSAG00000044928) ATPG (ENSSSAG00000077151) kin (ENSSSAG00000077119) itih2 (ENSSSAG00000076734) tmem110l (ENSSSAG00000076671) ITIH5 (ENSSSAG00000076687) SFMBT2 (ENSSSAG00000076597) River trout MODERN SPECIES 34 cbll1 (ENSSTUG00000046223) ppp6r2a (ENSSTUG00000046287) #12 sbf1 (ENSSTUG00000047272) #13 ADM2 (ENSSTUG00000050087) ##14 ENSSTUG00000050088 ENSSTUG00000050097 hsp90b1 (ENSSTUG00000050124) #16 glt8d2 (ENSSTUG00000050268) #18 ankrd16 (ENSSTUG00000050269) #27 gdi2 (ENSSTUG00000050287) #26 ENSSTUG00000050381 asb13a.2 (ENSSTUG00000050383) net1 (ENSSTUG00000050391) mkln1 (ENSSTUG00000050430) #23 podxl (ENSSTUG00000050451) ENSSTUG00000050467 #22 ENSSTUG00000050511 ENSSTUG00000050522 ENSSTUG00000050535 chst11 (ENSSTUG00000050538) ENSSTUG00000050539 ENSSTUG00000050540 ENSSTUG00000050543 ENSSTUG00000050578 ENSSTUG00000050604 ENSSTUG00000050613 ECHDC3 (ENSSTUG00000050656) usp6nl (ENSSTUG00000050658) celf2 (ENSSTUG00000050683) ENSSTUG00000050896 atp5f1c (ENSSTUG00000050897) Salmoninae ANCESTRAL SPECIES 405 ENSGT00510000047522.m.b ENSGT00390000009899.b.m.e #12 ENSGT00940000155263.j #13 ENSGT00940000154380.a.a.b.b ##14 ENSGT00940000159729.k.a ENSGT00940000155591.i.a ENSGT00530000064216 ENSGT01020000230401.b.a.f.b #16 ENSGT00940000158078.h #18 ENSGT00950000182994.B.a.b.ob.b #26 ENSGT00940000160326.c.b.c.b ENSGT00940000160326.c.a.a ENSGT00940000155849.h.c ENSGT00390000001702.p #23 ENSGT00730000111314.f ENSGT00390000009047.b.y.a.b #22 ENSGT01040000240385.A.b.b.a.b.a.a.a.a.b.b Salmoninae_a ANCESTRAL SPECIES 75 ENSGT00510000047522.m.a ENSGT00390000009899.b.m.f #12 ENSGT00940000155263.i #13 ENSGT00940000154380.a.a.b.a ##14 ENSGT00940000159729.k.b ENSGT00940000155591.i.b ENSGT01020000230401.b.a.f.a #16 ENSGT00940000158078.g #18 ENSGT00940000153969.a.f #27 ENSGT00950000182994.B.a.b.ob.a #26 ENSGT00940000160326.c.b.d ENSGT00940000160326.c.a.b ENSGT00940000155849.h.d ENSGT00390000001702.o #23 ENSGT00730000111314.e ENSGT00390000009047.b.y.a.b #22 ENSGT01040000240385.A.b.b.a.b.a.a.a.a.b.b.a ENSGT00940000154917.gb.a.b ENSGT00940000160180 ENSGT00950000186379 ENSGT00940000159167.cb ENSGT00940000159167.bb.a ENSGT00950000183042.a.b.a.g.a ENSGT00940000156715.r ENSGT00940000157926.h ENSGT00940000156715.q.a ENSGT00940000155461.A.q.a ENSGT00940000159247.h ENSGT00390000006837.bb ENSGT00390000005903.t ENSGT00940000157945.i.b Salmo ANCESTRAL SPECIES 25 ENSGT00510000047522.m.a ENSGT00390000009899.b.m.f #12 ENSGT00940000155263.i #13 ENSGT00940000154380.a.a.b.a ##14 ENSGT00940000159729.k.b ENSGT00940000155591.i.b ENSGT01020000230401.b.a.f.a #16 ENSGT00940000158078.g #18 ENSGT00940000153969.a.f #27 ENSGT00950000182994.B.a.b.ob.a #26 ENSGT00940000160326.c.b.c.a ENSGT00940000160326.c.a.b ENSGT00940000155849.h.d ENSGT00390000001702.o #23 ENSGT00730000111314.e ENSGT00390000009047.b.y.a.b #22 ENSGT01040000240385.A.b.b.a.b.a.a.a.a.b.b.a ENSGT00390000009047.b.z.a #22 ENSGT00940000154917.gb.a.b ENSGT00940000159167.bb.a ENSGT00940000156715.r ENSGT00940000157926.h ENSGT00940000156715.q.a ENSGT00940000155461.A.q.a ENSGT00940000159247.h ENSGT00390000006837.bb ENSGT00390000005903.t ENSGT00940000157945.i.b ENSGT00940000158317.f ENSGT00940000153920.a.a.a ENSGT00940000158123.y River trout MODERN SPECIES 38 sbf1 (ENSSTUG00000008424) #13 ADM2 (ENSSTUG00000008357) ##14 ENSSTUG00000008347 ENSSTUG00000008335 gsnb (ENSSTUG00000003999) ENSSTUG00000003763 hsp90b1 (ENSSTUG00000001624) #16 glt8d2 (ENSSTUG00000001564) #18 ankrd16 (ENSSTUG00000001551) #27 gdi2 (ENSSTUG00000001449) #26 asb13a.1 (ENSSTUG00000001427) asb13a.2 (ENSSTUG00000001416) net1 (ENSSTUG00000001257) mkln1 (ENSSTUG00000001088) #23 podxl (ENSSTUG00000000873) ENSSTUG00000025339 #22 ENSSTUG00000025336 ENSSTUG00000025313 ENSSTUG00000025299 ENSSTUG00000025265 ENSSTUG00000024875 ECHDC3 (ENSSTUG00000024833) ENSSTUG00000024807 ECHDC3 (ENSSTUG00000024764) usp6nl (ENSSTUG00000024696) ENSSTUG00000024685 celf2 (ENSSTUG00000023984) gata3 (ENSSTUG00000023944) atp5f1c (ENSSTUG00000023879) kin (ENSSTUG00000023771) itih2 (ENSSTUG00000020103) Oncorhynchus ANCESTRAL SPECIES 9 ENSGT00390000009899.b.m.f #12 ENSGT00940000155263.i #13 ENSGT00940000154380.a.a.b.a ##14 ENSGT00940000159729.k.a.d ENSGT00940000155591.i.b ENSGT01020000230401.b.a.f.a #16 ENSGT00940000158078.g #18 ENSGT00940000153969.a.f.a #27 ENSGT00950000182994.B.a.b.ob.a #26 ENSGT00940000160326.c.b.d ENSGT00940000160326.c.a.b ENSGT00940000155849.h.d ENSGT00390000001702.o #23 ENSGT00730000111314.e ENSGT00390000009047.b.y.b #22 ENSGT00390000009047.b.y.a.b #22 ENSGT01040000240385.A.b.b.a.b.a.a.a.a.b.b.a ENSGT00940000154917.gb.a.b ENSGT01010000229644 ENSGT00940000159167.cb ENSGT00950000183042.a.b.a.g.a.b ENSGT00940000157926.h ENSGT00940000156715.q.a ENSGT00940000155461.A.q.a ENSGT00940000159247.h.a ENSGT00390000006837.bb ENSGT00390000005903.t ENSGT00940000157945.i.b ENSGT00940000158317.f ENSGT00940000153920.a.a.a ENSGT00940000158123.y Rainbow trout MODERN SPECIES 13 ENSOMYG00000011714 #13 ADM2 (ENSOMYG00000020561) ##14 ENSOMYG00000020565 ENSOMYG00000020761 ENSOMYG00000023417 #16 ENSOMYG00000023828 #18 ankrd16 (ENSOMYG00000023853) #27 gdi2 (ENSOMYG00000023935) #26 asb13a.1 (ENSOMYG00000024094) asb13a.2 (ENSOMYG00000024103) ENSOMYG00000055658 net1 (ENSOMYG00000024185) mkln1 (ENSOMYG00000024332) #23 podxl (ENSOMYG00000074158) ENSOMYG00000067187 ENSOMYG00000059869 #22 ENSOMYG00000024473 NFYB (ENSOMYG00000024484) ENSOMYG00000024493 chst11 (ENSOMYG00000024512) SLC41A2 (ENSOMYG00000024622) ENSOMYG00000024672 usp6nl (ENSOMYG00000024701) ENSOMYG00000024940 ENSOMYG00000073279 ENSOMYG00000067582 gata3 (ENSOMYG00000025527) kin (ENSOMYG00000029457) itih2 (ENSOMYG00000026210) ITIH5 (ENSOMYG00000029484) ENSOMYG00000049236 Huchen MODERN SPECIES 351 ADM2 (ENSHHUG00000048522) ##14 ENSHHUG00000048523 gsnb (ENSHHUG00000048529) hsp90b1 (ENSHHUG00000048594) #16 ENSHHUG00000049008 glt8d2 (ENSHHUG00000049017) #18 ankrd16 (ENSHHUG00000049040) #27 gdi2 (ENSHHUG00000049045) #26 asb13a.1 (ENSHHUG00000049082) asb13a.2 (ENSHHUG00000049100) net1 (ENSHHUG00000049107) ENSHHUG00000049129 ENSHHUG00000049134 mkln1 (ENSHHUG00000049137) #23 podxl (ENSHHUG00000049158) ENSHHUG00000049166 #22 ENSHHUG00000049182 NFYB (ENSHHUG00000049191) ENSHHUG00000049233 chst11 (ENSHHUG00000049237) ENSHHUG00000049238 Salmoninae ANCESTRAL SPECIES 684 ENSGT00390000011492.b ENSGT00940000155834.i.b.a.a ENSGT00940000157129.f.a.a ENSGT00390000009047.b.y.b #22 ENSGT00940000153110.B.f ENSGT00940000154818.e.b ENSGT00940000167341.a ENSGT00940000156334.b ENSGT00940000158165.a ENSGT00940000157275.b.a ENSGT00940000159122.g.a ENSGT00940000162677.pc.b ENSGT00940000155057.wb.h Salmoninae_a ANCESTRAL SPECIES ENSGT00390000009047.b.y.b #22 Oncorhynchus ANCESTRAL SPECIES 9 ENSGT00510000047522.m.a ENSGT00390000009899.b.m.f #12 ENSGT00940000155263.i #13 ENSGT00940000154380.a.a.b.a ##14 ENSGT00940000159729.k.a.d ENSGT00940000155591.i.b ENSGT01020000230401.b.a.f.a #16 ENSGT00940000158078.g #18 ENSGT00940000153969.a.f.a #27 ENSGT00950000182994.B.a.b.ob.a #26 ENSGT00940000160326.c.b.d ENSGT00940000160326.c.a.b ENSGT00940000155849.h.d ENSGT00390000001702.o #23 ENSGT00730000111314.e ENSGT00390000009047.b.y.b #22 ENSGT00390000009047.b.y.a.b #22 ENSGT01040000240385.A.b.b.a.b.a.a.a.a.b.b.a ENSGT00940000154917.gb.a.b ENSGT01010000229644 ENSGT00940000159167.cb ENSGT00950000183042.a.b.a.g.a.b ENSGT00940000157926.h ENSGT00940000156715.q.a ENSGT00940000155461.A.q.a ENSGT00940000159247.h.a ENSGT00390000006837.bb ENSGT00390000005903.t ENSGT00940000157945.i.b ENSGT00940000158317.f ENSGT00940000153920.a.a.a Oncorhynchus_a ANCESTRAL SPECIES 16 ENSGT00510000047522.m.a ENSGT00390000009899.b.m.f #12 ENSGT00940000155263.i #13 ENSGT00940000154380.a.a.b.a ##14 ENSGT00940000159729.k.a.d ENSGT00940000155591.i.b ENSGT01020000230401.b.a.f.a #16 ENSGT00940000158078.g #18 ENSGT00940000153969.a.f.a #27 ENSGT00950000182994.B.a.b.ob.a #26 ENSGT00940000160326.c.b.d ENSGT00940000160326.c.a.b ENSGT00940000155849.h.d ENSGT00390000001702.o #23 ENSGT00730000111314.e ENSGT00390000009047.b.y.b #22 ENSGT01040000240385.A.b.b.a.b.a.a.a.a.b.b.a ENSGT00940000154917.gb.a.b ENSGT01010000229644 ENSGT00940000159167.bb.b ENSGT00950000183042.a.b.a.g.a.b ENSGT00940000157926.h ENSGT00940000156715.q.a.a ENSGT00940000159247.h.a ENSGT00390000006837.bb ENSGT00390000005903.t ENSGT00940000157945.i.b ENSGT00940000158317.e.d ENSGT00940000157945.j ENSGT00940000158317.f ENSGT00940000153920.a.a.a Chinook salmon MODERN SPECIES 6 CCND2 (ENSOTSG00005008493) ENSOTSG00005008495 ENSOTSG00005008497 ETV6 (ENSOTSG00005008498) ENSOTSG00005008499 zgc:165507 (ENSOTSG00005008500) lrig3 (ENSOTSG00005008501) atp23 (ENSOTSG00005008502) rpap3 (ENSOTSG00005008503) ENSOTSG00005008531 mapk12b (ENSOTSG00005008538) mapk11 (ENSOTSG00005008618) net1 (ENSOTSG00005008638) mkln1 (ENSOTSG00005008660) #23 podxl (ENSOTSG00005008665) ENSOTSG00005008667 #22 ENSOTSG00005008669 ENSOTSG00005008670 ENSOTSG00005008679 ENSOTSG00005008681 ENSOTSG00005008682 gata3 (ENSOTSG00005008685) gata3 (ENSOTSG00005008687) atp5f1c (ENSOTSG00005008690) kin (ENSOTSG00005008830) itih2 (ENSOTSG00005008833) ITIH5 (ENSOTSG00005010926) tmem110l (ENSOTSG00005010928) SFMBT2 (ENSOTSG00005010932) prkcq (ENSOTSG00005010961) pfkfb3 (ENSOTSG00005013093) Huchen MODERN SPECIES 61 ENSHHUG00000036577 elk3 (ENSHHUG00000036599) ENSHHUG00000036608 #22 ENSHHUG00000036609 snrpf (ENSHHUG00000036610) metap2a (ENSHHUG00000036623) ENSHHUG00000036699 nr2c1 (ENSHHUG00000036720) tmcc3 (ENSHHUG00000036917) ENSHHUG00000036927 ENSHHUG00000036937 cdkn1ca (ENSHHUG00000036944) MAGI2 (ENSHHUG00000036950) ldha (ENSHHUG00000037027) hbp1 (ENSHHUG00000037198) PRKAR2B (ENSHHUG00000037214) ENSHHUG00000037233 #16 NT5DC3 (ENSHHUG00000037299) Salmoninae ANCESTRAL SPECIES 171 ENSGT00940000153525.i.b.f ENSGT00390000014507.a.a.h ENSGT00390000002915.e ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b.h ENSGT00950000182994.B.a.b.pb.b #26 ENSGT00710000106806.l ENSGT00940000155461.E.l ENSGT00950000183125.a.a.b ENSGT00940000156776.d.b.a.d ENSGT00940000155834.i.b.b ENSGT00940000155834.i.b.a.b ENSGT00940000157129.f.a.b ENSGT00390000009047.b.z #22 ENSGT01070000255793 ENSGT00940000164757 ENSGT00940000156615.b ENSGT00940000167341.b ENSGT00940000153655.B ENSGT00940000157922.a.b ENSGT00940000156334.a.a ENSGT00940000158165.b ENSGT00940000157275.b.b ENSGT00940000159122.g.b ENSGT00940000153588.a.a.b.e ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637.e ENSGT01020000230401.b.a.e.a #16 Huchen MODERN SPECIES 3016 ENSHHUG00000002119 CDK17 (ENSHHUG00000002130) elk3 (ENSHHUG00000002159) hal (ENSHHUG00000002174) #22 ENSHHUG00000002266 snrpf (ENSHHUG00000002299) Salmoninae_a ANCESTRAL SPECIES 65 ENSGT00390000008708.a.b ENSGT00940000153525.i.b.f ENSGT00390000014507.a.a.h ENSGT00390000002915.e ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b.h ENSGT00950000182994.B.a.b.pb.b #26 ENSGT00710000106806.l ENSGT00940000155461.E.l ENSGT00950000183125.a.a.b ENSGT00940000156776.d.b.a.d ENSGT00940000155834.i.b.b ENSGT00940000157129.f.a.b ENSGT00390000009047.b.z #22 ENSGT00940000153110.B.f ENSGT00940000154818.e.b ENSGT00940000156615.b ENSGT00940000167341.b ENSGT00940000153655.B ENSGT00940000157922.a.b ENSGT00940000156334.a.a ENSGT00940000158165.b ENSGT00940000157275.b.b ENSGT00940000159122.g.b ENSGT00940000153588.a.a.b.e ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637.e ENSGT01020000230401.b.a.e.a #16 Oncorhynchus ANCESTRAL SPECIES 10 ENSGT00940000154098.a.e.i ENSGT00390000008708.a.b ENSGT00390000014507.a.a.h ENSGT00390000002915.e ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b.h ENSGT00950000182994.B.a.b.pb.b #26 ENSGT00710000106806.l ENSGT00940000155461.E.l ENSGT00950000183125.a.a.b ENSGT00940000156776.d.b.a.d ENSGT00940000155834.i.b.b.a ENSGT00940000157129.f.a.b ENSGT00390000009047.b.z #22 ENSGT00940000153110.B.f ENSGT00940000154818.e.b ENSGT00940000156615.b ENSGT00940000167341.b ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165.b ENSGT00940000157275.b.b ENSGT00940000159122.g.b ENSGT00940000153588.a.a.b.e ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637.e ENSGT01020000230401.b.a.e.a #16 ENSGT00940000161245 Rainbow trout MODERN SPECIES 11 golt1bb (ENSOMYG00000009361) slc35b4 (ENSOMYG00000009392) chchd3b (ENSOMYG00000009427) ENSOMYG00000009461 ASB13 (ENSOMYG00000009491) ENSOMYG00000009516 GDI2 (ENSOMYG00000009679) #26 ENSOMYG00000010058 ENSOMYG00000010117 ENSOMYG00000011038 camk1db (ENSOMYG00000065172) ENSOMYG00000066222 CDK17 (ENSOMYG00000016470) ENSOMYG00000077575 ELK3 (ENSOMYG00000016504) HAL (ENSOMYG00000016531) #22 CCDC38 (ENSOMYG00000017530) SNRPF (ENSOMYG00000058659) NTN4 (ENSOMYG00000017610) ENSOMYG00000017770 ENSOMYG00000017833 FGD6 (ENSOMYG00000017867) NR2C1 (ENSOMYG00000017998) TMCC3 (ENSOMYG00000063782) ENSOMYG00000067619 ENSOMYG00000055317 ENSOMYG00000018863 ENSOMYG00000020041 ENSOMYG00000011783 ENSOMYG00000020048 ENSOMYG00000020053 Oncorhynchus_a ANCESTRAL SPECIES 5 ENSGT00390000008708.a.b ENSGT00390000014507.a.a.h ENSGT00390000002915.e ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b.h ENSGT00950000182994.B.a.b.pb.b #26 ENSGT00900000143702 ENSGT00710000106806.l ENSGT00940000155461.E.l ENSGT00950000183125.a.a.b ENSGT00940000156776.d.b.a.d ENSGT00940000155834.i.b.b.a ENSGT00940000157129.f.a.b ENSGT00390000009047.b.z #22 ENSGT00940000153110.B.f ENSGT00940000154818.e.b.d ENSGT00940000156615.b ENSGT00940000167341.b ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165.b ENSGT00940000157275.b.b ENSGT00940000159122.g.b ENSGT00940000153588.a.a.b.e ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637.e ENSGT01020000230401.b.a.e.a #16 ENSGT00940000161245 Coho salmon MODERN SPECIES 14 tmpob (ENSOKIG00005016372) slc25a3b (ENSOKIG00005016396) golt1bb (ENSOKIG00005016467) slc35b4 (ENSOKIG00005016494) chchd3b (ENSOKIG00005016532) NET1 (ENSOKIG00005016560) ASB13 (ENSOKIG00005016594) ENSOKIG00005016606 GDI2 (ENSOKIG00005016669) #26 TAF3 (ENSOKIG00005016817) CELF2 (ENSOKIG00005016898) DHTKD1 (ENSOKIG00005017359) camk1db (ENSOKIG00005019764) CDK17 (ENSOKIG00005020000) ELK3 (ENSOKIG00005020245) hal (ENSOKIG00005020375) #22 snrpf (ENSOKIG00005022038) NTN4 (ENSOKIG00005022048) ENSOKIG00005022068 ENSOKIG00005022229 FGD6 (ENSOKIG00005022245) nr2c1 (ENSOKIG00005022392) TMCC3 (ENSOKIG00005023233) ENSOKIG00005023255 ENSOKIG00005023289 FLNC (ENSOKIG00005023423) ENSOKIG00005028515 ENSOKIG00005028530 ENSOKIG00005028565 parietopsin (ENSOKIG00005028620) ENSOKIG00005028695 Chinook salmon MODERN SPECIES 10 tmpob (ENSOTSG00005002461) slc25a3b (ENSOTSG00005002470) golt1bb (ENSOTSG00005002556) slc35b4 (ENSOTSG00005002559) chchd3b (ENSOTSG00005002714) ENSOTSG00005002727 ##25 ENSOTSG00005002735 gdi2 (ENSOTSG00005002748) #26 ENSOTSG00005002898 taf3 (ENSOTSG00005002901) ENSOTSG00005002907 ENSOTSG00005002914 dhtkd1 (ENSOTSG00005002971) CDK17 (ENSOTSG00005004329) elk3 (ENSOTSG00005004332) hal (ENSOTSG00005004349) #22 ENSOTSG00005007091 snrpf (ENSOTSG00005007092) NTN4 (ENSOTSG00005007093) FLNC (ENSOTSG00005007130) ENSOTSG00005008720 ENSOTSG00005008721 pgghg (ENSOTSG00005008722) metap2a (ENSOTSG00005008723) nr2c1 (ENSOTSG00005008727) ENSOTSG00005008733 ENSOTSG00005008734 SLCO1C1 (ENSOTSG00005008735) ENSOTSG00005008741 ENSOTSG00005008742 ENSOTSG00005008743 Salmo DUPLICATION Salmo ANCESTRAL SPECIES 25 ENSGT00940000155263.i #13 ENSGT00940000154380.a.a.b.a ##14 ENSGT00940000159729.k.b ENSGT00940000155591.i.b ENSGT01020000230401.b.a.f.a #16 ENSGT00940000158078.g #18 ENSGT00940000153969.a.f #27 ENSGT00950000182994.B.a.b.ob.a #26 ENSGT00940000160326.c.b.c.a ENSGT00940000160326.c.a.b ENSGT00940000155849.h.d ENSGT00390000001702.o #23 ENSGT00730000111314.e ENSGT00390000009047.b.y.a.b #22 ENSGT01040000240385.A.b.b.a.b.a.a.a.a.b.b.a ENSGT00390000009047.b.z.a #22 ENSGT00940000154917.gb.a.b ENSGT00940000159167.bb.a ENSGT00940000156715.r ENSGT00940000157926.h ENSGT00940000156715.q.a ENSGT00940000155461.A.q.a ENSGT00940000159247.h ENSGT00390000006837.bb ENSGT00390000005903.t ENSGT00940000157945.i.b ENSGT00940000158317.f ENSGT00940000153920.a.a.a ENSGT00940000158123.y ENSGT00940000157638.g ENSGT00950000182835.d.b.d Atlantic salmon MODERN SPECIES 26 ENSSSAG00000078496 slc26a4 (ENSSSAG00000078432) ENSSSAG00000109885 cbll1 (ENSSSAG00000108530) PPP6R2 (ENSSSAG00000078063) #12 ENSSSAG00000071635 #13 ADM2 (ENSSSAG00000109006) ##14 ENSSSAG00000070970 ENSSSAG00000070462 #16 glt8d2 (ENSSSAG00000070445) #18 ankrd16 (ENSSSAG00000070443) #27 gdi2 (ENSSSAG00000115429) #26 asb13a.2 (ENSSSAG00000070346) net1 (ENSSSAG00000069800) mkln1 (ENSSSAG00000078366) #23 ENSSSAG00000069547 #22 podxl (ENSSSAG00000111988) NFYB (ENSSSAG00000069541) chst11 (ENSSSAG00000069545) ENSSSAG00000069531 SLC41A2 (ENSSSAG00000068604) ENSSSAG00000077737 usp6nl (ENSSSAG00000068557) celf2 (ENSSSAG00000065338) gata3 (ENSSSAG00000065097) atp5f1c (ENSSSAG00000065070) kin (ENSSSAG00000090741) itih2 (ENSSSAG00000062711) ITIH5 (ENSSSAG00000062530) ENSSSAG00000086232 tmem110l (ENSSSAG00000090121) Salmo ANCESTRAL SPECIES 60 ENSGT00390000008708.a.b ENSGT00940000153525.i.b.f ENSGT00390000014507.a.a.h ENSGT00390000002915.e ENSGT00390000000903.a.j ENSGT00940000155849.g ENSGT00940000160326.d ENSGT00530000063735.b.h ENSGT00950000182994.B.a.b.pb.b #26 ENSGT00710000106806.l ENSGT00940000155461.E.l ENSGT00950000183125.a.a.b ENSGT00940000156776.d.b.a.d ENSGT00940000155834.i.b.a.b ENSGT00940000157129.f.a.b ENSGT00390000009047.b.z.b #22 ENSGT00940000153110.B.f ENSGT00940000164757.a ENSGT00940000156615.b ENSGT00940000167341.b ENSGT00940000153655.B ENSGT00940000156334.a.a ENSGT00940000158165.b ENSGT00940000157275.b.b ENSGT00940000159122.g.b ENSGT00940000153588.a.a.b.e ENSGT00940000155472.a.b.a.b ENSGT01100000263502.A.b.b ENSGT00940000158637.e ENSGT01020000230401.b.a.e.a #16 ENSGT00940000161245 Atlantic salmon MODERN SPECIES 1 ldhbb (ENSSSAG00000071409) golt1bb (ENSSSAG00000082709) chchd3b (ENSSSAG00000079607) ENSSSAG00000079616 ASB13 (ENSSSAG00000079639) ENSSSAG00000079646 GDI2 (ENSSSAG00000079660) #26 ENSSSAG00000079670 ENSSSAG00000003957 dhtkd1 (ENSSSAG00000004095) ENSSSAG00000069225 CDK17 (ENSSSAG00000005463) ENSSSAG00000114706 ENSSSAG00000113798 ELK3 (ENSSSAG00000007647) hal (ENSSSAG00000007680) #22 CCDC38 (ENSSSAG00000008350) ENSSSAG00000008364 ENSSSAG00000008389 ENSSSAG00000009161 FGD6 (ENSSSAG00000009198) NR2C1 (ENSSSAG00000009262) TMCC3 (ENSSSAG00000009291) ENSSSAG00000087913 ENSSSAG00000092545 ENSSSAG00000009590 ENSSSAG00000105369 ENSSSAG00000092273 ENSSSAG00000042589 ENSSSAG00000042598 ENSSSAG00000042652 River trout MODERN SPECIES 37 pthlhb (ENSSTUG00000051256) tmpob (ENSSTUG00000051257) slc25a3b (ENSSTUG00000051258) golt1bb (ENSSTUG00000014009) slc35b4 (ENSSTUG00000014039) chchd3b (ENSSTUG00000014101) NET1 (ENSSTUG00000014132) ASB13 (ENSSTUG00000014806) gdi2 (ENSSTUG00000014955) #26 taf3 (ENSSTUG00000015161) CELF2 (ENSSTUG00000015201) dhtkd1 (ENSSTUG00000015357) camk1db (ENSSTUG00000017654) CDK17 (ENSSTUG00000018320) elk3 (ENSSTUG00000019202) hal (ENSSTUG00000019241) #22 ENSSTUG00000020018 ENSSTUG00000020029 NTN4 (ENSSTUG00000020034) metap2a (ENSSTUG00000020059) ENSSTUG00000020278 FGD6 (ENSSTUG00000020300) nr2c1 (ENSSTUG00000020574) tmcc3 (ENSSTUG00000020606) ENSSTUG00000020629 FLNC (ENSSTUG00000021115) ENSSTUG00000039368 parietopsin (ENSSTUG00000039374) ENSSTUG00000039409 HSP90B1 (ENSSTUG00000040801) #16 ENSSTUG00000041140 Northern pike DUPLICATION Northern pike MODERN SPECIES 22 slc26a3.1 (ENSELUG00000004480) cbll1 (ENSELUG00000004495) ppp6r2a (ENSELUG00000004548) #12 sbf1 (ENSELUG00000004779) #13 adm2a (ENSELUG00000027918) ##14 ENSELUG00000004901 hsp90b1 (ENSELUG00000004974) #16 glt8d2 (ENSELUG00000005016) #18 ankrd16 (ENSELUG00000005028) #27 gdi2 (ENSELUG00000005059) #26 asb13a.1 (ENSELUG00000005082) ENSELUG00000005142 net1 (ENSELUG00000005211) mkln1 (ENSELUG00000005393) #23 podxl (ENSELUG00000005448) ENSELUG00000005513 #22 NFYB (ENSELUG00000005480) chst11 (ENSELUG00000005547) SLC41A2 (ENSELUG00000000152) ECHDC3 (ENSELUG00000000156) ENSELUG00000026872 celf2 (ENSELUG00000005848) gata3 (ENSELUG00000005916) atp5f1c (ENSELUG00000005978) kin (ENSELUG00000006020) itih2 (ENSELUG00000006055) ITIH5 (ENSELUG00000006107) tmem110l (ENSELUG00000006132) SFMBT2 (ENSELUG00000006232) prkcq (ENSELUG00000006297) ENSELUG00000032876 Northern pike MODERN SPECIES 18 ldhbb (ENSELUG00000008561) golt1bb (ENSELUG00000008613) ENSELUG00000029450 slc35b4 (ENSELUG00000008530) ENSELUG00000008507 NET1 (ENSELUG00000008463) ENSELUG00000008439 ##25 ENSELUG00000008418 gdi2 (ENSELUG00000008361) #26 taf3 (ENSELUG00000008323) CELF2 (ENSELUG00000008279) dhtkd1 (ENSELUG00000008213) camk1db (ENSELUG00000008100) CDK17 (ENSELUG00000007898) elk3 (ENSELUG00000007836) hal (ENSELUG00000007804) #22 ENSELUG00000007760 snrpf (ENSELUG00000007737) NTN4 (ENSELUG00000007724) metap2a (ENSELUG00000007703) ENSELUG00000033148 FGD6 (ENSELUG00000007670) nr2c1 (ENSELUG00000007641) tmcc3 (ENSELUG00000007578) ENSELUG00000007550 FLNC (ENSELUG00000007451) ENSELUG00000007275 parietopsin (ENSELUG00000001367) NT5DC3 (ENSELUG00000007226) hsp90b1 (ENSELUG00000007182) #16 SYPL1 (ENSELUG00000007126) Osteoglossiformes ANCESTRAL SPECIES 392 ENSGT00390000003057 ENSGT00940000156776.d.b.b ENSGT00390000014429.b ENSGT00530000063808.b.f ENSGT00390000011492 ENSGT00390000001775.B ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375.c ENSGT00390000009047.b #22 ENSGT00390000008645 P. kingsleyae MODERN SPECIES 133 KLHL10 (ENSPKIG00000014767) snrpf (ENSPKIG00000014784) ntn4 (ENSPKIG00000014811) usp44 (ENSPKIG00000014854) metap2b (ENSPKIG00000014889) ENSPKIG00000014922 vezt (ENSPKIG00000015020) fgd6 (ENSPKIG00000015199) nr2c1 (ENSPKIG00000015286) ndufa12 (ENSPKIG00000015374) TMCC3 (ENSPKIG00000015465) ENSPKIG00000015518 #22 CEP83 (ENSPKIG00000015577) ENSPKIG00000015633 ENSPKIG00000015666 ENSPKIG00000015698 cradd (ENSPKIG00000015725) socs2 (ENSPKIG00000015735) sco2 (ENSPKIG00000015760) ENSPKIG00000015779 FLNC (ENSPKIG00000015819) ENSPKIG00000015884 kcnd2 (ENSPKIG00000015914) tspan12 (ENSPKIG00000015944) ing3 (ENSPKIG00000015991) CPED1 (ENSPKIG00000016047) wnt16 (ENSPKIG00000016084) Spotted gar DUPLICATION Spotted gar MODERN SPECIES 674 ENSLOCG00000015697 UPF2 (ENSLOCG00000015698) dhtkd1 (ENSLOCG00000015702) SEC61A2 (ENSLOCG00000015709) nudt5 (ENSLOCG00000015711) cdc123 (ENSLOCG00000015714) camk1da (ENSLOCG00000015716) ccdc3a (ENSLOCG00000015717) optn (ENSLOCG00000015719) mcm10 (ENSLOCG00000015721) ucmaa (ENSLOCG00000015722) phyh (ENSLOCG00000015723) cdk17 (ENSLOCG00000015727) elk3 (ENSLOCG00000015730) lta4h (ENSLOCG00000015731) hal (ENSLOCG00000015734) #22 amdhd1 (ENSLOCG00000015737) CCDC38 (ENSLOCG00000015742) snrpf (ENSLOCG00000015744) ntn4 (ENSLOCG00000015745) usp44 (ENSLOCG00000015748) metap2b (ENSLOCG00000015749) ENSLOCG00000015751 vezt (ENSLOCG00000015752) fgd6 (ENSLOCG00000015755) nr2c1 (ENSLOCG00000015757) tmcc3 (ENSLOCG00000015758) hal (ENSLOCG00000015759) #22 CEP83 (ENSLOCG00000015765) PLXNC1 (ENSLOCG00000015767) cradd (ENSLOCG00000015772) Spotted gar MODERN SPECIES 674 ENSLOCG00000015797 CPED1 (ENSLOCG00000015795) ENSLOCG00000015794 ing3 (ENSLOCG00000015792) tspan12 (ENSLOCG00000015791) ENSLOCG00000015789 FLNC (ENSLOCG00000015781) ENSLOCG00000015779 ENSLOCG00000015776 sco2 (ENSLOCG00000017903) ncaph2 (ENSLOCG00000015775) socs2 (ENSLOCG00000015773) cradd (ENSLOCG00000015772) PLXNC1 (ENSLOCG00000015767) CEP83 (ENSLOCG00000015765) hal (ENSLOCG00000015759) #22 tmcc3 (ENSLOCG00000015758) nr2c1 (ENSLOCG00000015757) fgd6 (ENSLOCG00000015755) vezt (ENSLOCG00000015752) ENSLOCG00000015751 metap2b (ENSLOCG00000015749) usp44 (ENSLOCG00000015748) ntn4 (ENSLOCG00000015745) snrpf (ENSLOCG00000015744) CCDC38 (ENSLOCG00000015742) amdhd1 (ENSLOCG00000015737) hal (ENSLOCG00000015734) #22 lta4h (ENSLOCG00000015731) elk3 (ENSLOCG00000015730) cdk17 (ENSLOCG00000015727) Sarcopterygii ANCESTRAL SPECIES 12 ENSGT00940000165155 ENSGT00940000158018 ENSGT00390000002524 ENSGT00940000158319 ENSGT00610000087444 ENSGT00940000157255 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00940000164439 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000164757 ENSGT01070000255793 ENSGT00940000154818 ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT01020000230394.e.b.b.a.a Tetrapoda ANCESTRAL SPECIES 5 ENSGT00940000165155 ENSGT00940000158018 ENSGT00390000002524 ENSGT00940000158319 ENSGT00610000087444 ENSGT00940000157255 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00940000164439 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT01020000230394.e.b.b.a.a ENSGT00390000014448 Amniota ANCESTRAL SPECIES 5 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT01070000255793 ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A Mammalia ANCESTRAL SPECIES 8 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Theria ANCESTRAL SPECIES 2 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT01070000255793 ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A Marsupialia ANCESTRAL SPECIES 11 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00490000043421 ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT01070000255793 ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b Marsupialia_b ANCESTRAL SPECIES 13 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00490000043421 ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT01070000255793 ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b Diprotodontia ANCESTRAL SPECIES 8 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00490000043421 ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT01070000255793 ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448.c ENSGT00940000170788 Diprotodontia_a ANCESTRAL SPECIES 8 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00490000043421 ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT01070000255793 ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448.c ENSGT00940000170788 Common wonbat MODERN SPECIES 711 DEPDC4 (ENSVURG00010024097) ACTR6 (ENSVURG00010024098) BLTP3B (ENSVURG00010024101) ENSVURG00010024110 ENSVURG00010024112 APAF1 (ENSVURG00010024119) IKBIP (ENSVURG00010024126) ENSVURG00010024128 ENSVURG00010024136 ENSVURG00010024138 NEDD1 (ENSVURG00010024144) ENSVURG00010024149 CDK17 (ENSVURG00010024156) ELK3 (ENSVURG00010024163) LTA4H (ENSVURG00010024166) HAL (ENSVURG00010024172) #22 AMDHD1 (ENSVURG00010024182) SNRPF (ENSVURG00010024187) NTN4 (ENSVURG00010024195) USP44 (ENSVURG00010024201) METAP2 (ENSVURG00010024208) VEZT (ENSVURG00010024246) FGD6 (ENSVURG00010024249) NR2C1 (ENSVURG00010024252) TMCC3 (ENSVURG00010024254) CEP83 (ENSVURG00010024256) ENSVURG00010024262 koala MODERN SPECIES 115 ENSPCIG00000024055 APAF1 (ENSPCIG00000008308) ENSPCIG00000008299 SLC25A3 (ENSPCIG00000008290) ENSPCIG00000023708 ENSPCIG00000023711 NEDD1 (ENSPCIG00000027170) ENSPCIG00000035153 CDK17 (ENSPCIG00000027142) ELK3 (ENSPCIG00000027138) LTA4H (ENSPCIG00000027131) HAL (ENSPCIG00000026943) #22 AMDHD1 (ENSPCIG00000026940) ENSPCIG00000035888 SNRPF (ENSPCIG00000032745) NTN4 (ENSPCIG00000011039) USP44 (ENSPCIG00000028102) METAP2 (ENSPCIG00000028103) VEZT (ENSPCIG00000036475) ENSPCIG00000011367 NDUFA12 (ENSPCIG00000011363) TMCC3 (ENSPCIG00000030977) CEP83 (ENSPCIG00000005919) PLXNC1 (ENSPCIG00000005924) ENSPCIG00000035562 ENSPCIG00000001373 SOCS2 (ENSPCIG00000001405) Wallaby MODERN SPECIES 462 HAL (ENSMEUG00000016419) #22 Tasmanian devil MODERN SPECIES 4 ENSSHAG00000011140 DEPDC4 (ENSSHAG00000010896) ACTR6 (ENSSHAG00000010695) BLTP3B (ENSSHAG00000009939) ANKS1B (ENSSHAG00000011922) APAF1 (ENSSHAG00000011224) IKBIP (ENSSHAG00000026418) SLC25A3 (ENSSHAG00000021483) ENSSHAG00000023115 ENSSHAG00000026704 NEDD1 (ENSSHAG00000016136) ENSSHAG00000023875 CDK17 (ENSSHAG00000014275) ELK3 (ENSSHAG00000030924) LTA4H (ENSSHAG00000012983) HAL (ENSSHAG00000012778) #22 AMDHD1 (ENSSHAG00000012599) CCDC38 (ENSSHAG00000012322) ENSSHAG00000012294 NTN4 (ENSSHAG00000010838) USP44 (ENSSHAG00000009686) METAP2 (ENSSHAG00000009501) VEZT (ENSSHAG00000008031) FGD6 (ENSSHAG00000020751) ENSSHAG00000003793 ENSSHAG00000030357 ENSSHAG00000029617 ENSSHAG00000001856 ENSSHAG00000027542 ENSSHAG00000006054 ENSSHAG00000002521 Opossum MODERN SPECIES 7 ENSMODG00000040381 APAF1 (ENSMODG00000007679) IKBIP (ENSMODG00000007700) SLC25A3 (ENSMODG00000007717) ENSMODG00000007723 ENSMODG00000007728 ENSMODG00000046160 ENSMODG00000046019 NEDD1 (ENSMODG00000007794) ENSMODG00000027889 ENSMODG00000007823 ENSMODG00000037829 CDK17 (ENSMODG00000007944) ELK3 (ENSMODG00000007957) LTA4H (ENSMODG00000007997) HAL (ENSMODG00000008030) #22 AMDHD1 (ENSMODG00000008049) CCDC38 (ENSMODG00000008077) ENSMODG00000008091 NTN4 (ENSMODG00000008108) USP44 (ENSMODG00000008126) ENSMODG00000008173 VEZT (ENSMODG00000008194) FGD6 (ENSMODG00000008231) ENSMODG00000025050 NR2C1 (ENSMODG00000008267) TMCC3 (ENSMODG00000008293) CEP83 (ENSMODG00000009361) PLXNC1 (ENSMODG00000009408) ENSMODG00000046679 ENSMODG00000027316 Eutheria ANCESTRAL SPECIES 1 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Boreoeutheria ANCESTRAL SPECIES 6 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00900000143786 Laurasiatheria ANCESTRAL SPECIES 6 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00900000143786 Eulipotyphla ANCESTRAL SPECIES 561 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 Hedgehog MODERN SPECIES 6 LTA4H (ENSEEUG00000001306) HAL (ENSEEUG00000001296) #22 Common shrew MODERN SPECIES 2797 HAL (ENSSARG00000012522) #22 AMDHD1 (ENSSARG00000012504) Laurasiatheria_a ANCESTRAL SPECIES 6 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00900000143786 Laurasiatheria_b ANCESTRAL SPECIES 6 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00900000143786 Carnivora ANCESTRAL SPECIES 3 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00950000185173 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b Caniformia ANCESTRAL SPECIES 20 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00950000185173 ENSGT00940000154003.A Caniformia_b ANCESTRAL SPECIES 18 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00950000185173 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b Ursidae ANCESTRAL SPECIES 13 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708.pb.b ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00950000185173 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b Ursus ANCESTRAL SPECIES 120 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708.pb.b ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00950000185173 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Polar bear MODERN SPECIES 144 GARIN6 (ENSUMAG00000005822) ENSUMAG00000005819 ENSUMAG00000005755 APAF1 (ENSUMAG00000004438) IKBIP (ENSUMAG00000004254) SLC25A3 (ENSUMAG00000004245) ENSUMAG00000004236 ENSUMAG00000004233 NEDD1 (ENSUMAG00000004163) ENSUMAG00000004139 ENSUMAG00000004133 CDK17 (ENSUMAG00000004126) ELK3 (ENSUMAG00000004121) LTA4H (ENSUMAG00000004113) HAL (ENSUMAG00000003632) #22 AMDHD1 (ENSUMAG00000003541) CCDC38 (ENSUMAG00000003532) SNRPF (ENSUMAG00000003528) NTN4 (ENSUMAG00000003522) USP44 (ENSUMAG00000003519) METAP2 (ENSUMAG00000003511) ENSUMAG00000003472 VEZT (ENSUMAG00000003464) FGD6 (ENSUMAG00000003327) NR2C1 (ENSUMAG00000003306) NDUFA12 (ENSUMAG00000003277) ENSUMAG00000003265 TMCC3 (ENSUMAG00000003259) ENSUMAG00000003254 CEP83 (ENSUMAG00000003241) American black bear MODERN SPECIES 396 ENSUAMG00000007992 ENSUAMG00000007997 CDK17 (ENSUAMG00000008003) ELK3 (ENSUAMG00000008009) LTA4H (ENSUAMG00000008013) HAL (ENSUAMG00000008031) #22 AMDHD1 (ENSUAMG00000008172) SNRPF (ENSUAMG00000008176) CCDC38 (ENSUAMG00000008179) NTN4 (ENSUAMG00000008182) Giant Panda MODERN SPECIES 6 SCYL2 (ENSAMEG00000015298) ACTR6 (ENSAMEG00000015315) BLTP3B (ENSAMEG00000001959) GARIN6 (ENSAMEG00000029798) ENSAMEG00000010821 APAF1 (ENSAMEG00000010759) IKBIP (ENSAMEG00000010756) SLC25A3 (ENSAMEG00000010735) ENSAMEG00000010691 NEDD1 (ENSAMEG00000004999) CFAP54 (ENSAMEG00000024197) ENSAMEG00000025825 CDK17 (ENSAMEG00000001927) ELK3 (ENSAMEG00000026087) LTA4H (ENSAMEG00000002029) HAL (ENSAMEG00000002098) #22 AMDHD1 (ENSAMEG00000002115) CCDC38 (ENSAMEG00000002136) ENSAMEG00000002166 NTN4 (ENSAMEG00000002169) USP44 (ENSAMEG00000002189) METAP2 (ENSAMEG00000002192) ENSAMEG00000028699 VEZT (ENSAMEG00000002219) FGD6 (ENSAMEG00000002237) NR2C1 (ENSAMEG00000002266) NDUFA12 (ENSAMEG00000026868) TMCC3 (ENSAMEG00000002299) CEP83 (ENSAMEG00000009750) PLXNC1 (ENSAMEG00000009772) ENSAMEG00000009818 Mustelinae ANCESTRAL SPECIES 4 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00950000185930 Ferret MODERN SPECIES 185 EIF3G (ENSMPUG00000006847) P2RY11 (ENSMPUG00000018711) PPAN (ENSMPUG00000006866) ANGPTL6 (ENSMPUG00000006875) SHFL (ENSMPUG00000006886) ENSMPUG00000006889 RDH8 (ENSMPUG00000006924) COL5A3 (ENSMPUG00000006933) NEDD1 (ENSMPUG00000006970) ENSMPUG00000006986 ENSMPUG00000007052 CDK17 (ENSMPUG00000007057) ELK3 (ENSMPUG00000007067) ENSMPUG00000018712 LTA4H (ENSMPUG00000007076) HAL (ENSMPUG00000007091) #22 AMDHD1 (ENSMPUG00000007121) CCDC38 (ENSMPUG00000007131) SNRPF (ENSMPUG00000007176) ENSMPUG00000018714 NTN4 (ENSMPUG00000007194) USP44 (ENSMPUG00000007203) METAP2 (ENSMPUG00000007214) VEZT (ENSMPUG00000007304) FGD6 (ENSMPUG00000007314) NR2C1 (ENSMPUG00000007335) NDUFA12 (ENSMPUG00000007354) TMCC3 (ENSMPUG00000007383) CEP83 (ENSMPUG00000007387) ENSMPUG00000007401 ENSMPUG00000007413 American mink MODERN SPECIES 20 BLTP3B (ENSNVIG00000008957) ENSNVIG00000008928 GARIN6 (ENSNVIG00000008922) ENSNVIG00000008653 ENSNVIG00000008570 IKBIP (ENSNVIG00000008542) SLC25A3 (ENSNVIG00000008484) ENSNVIG00000008369 ENSNVIG00000008275 NEDD1 (ENSNVIG00000008215) ENSNVIG00000008188 ENSNVIG00000008171 CDK17 (ENSNVIG00000008059) ELK3 (ENSNVIG00000008034) LTA4H (ENSNVIG00000007918) HAL (ENSNVIG00000007804) #22 AMDHD1 (ENSNVIG00000007777) CCDC38 (ENSNVIG00000007754) ENSNVIG00000007720 NTN4 (ENSNVIG00000007676) USP44 (ENSNVIG00000007637) METAP2 (ENSNVIG00000007476) VEZT (ENSNVIG00000007443) FGD6 (ENSNVIG00000007365) NR2C1 (ENSNVIG00000007296) NDUFA12 (ENSNVIG00000007274) TMCC3 (ENSNVIG00000007266) CEP83 (ENSNVIG00000007130) PLXNC1 (ENSNVIG00000007017) ENSNVIG00000006997 CRADD (ENSNVIG00000006955) Canidae ANCESTRAL SPECIES 12 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00910000144211.n.b.d ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000154818.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b Canis_lupus ANCESTRAL SPECIES 16 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00910000144211.n.b.d ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708.rb ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000153783.a ENSGT00390000009819.a.b.a.a.a.a.a.eb.a ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00950000185930 Dog MODERN SPECIES 6 ENSCAFG00845027984 ANKS1B (ENSCAFG00845027643) APAF1 (ENSCAFG00845027232) IKBIP (ENSCAFG00845027049) SLC25A3 (ENSCAFG00845026910) TMPO (ENSCAFG00845026620) NEDD1 (ENSCAFG00845026200) ENSCAFG00845026133 ENSCAFG00845026114 CFAP54 (ENSCAFG00845025772) ENSCAFG00845025679 ENSCAFG00845025653 CDK17 (ENSCAFG00845025438) ELK3 (ENSCAFG00845025317) LTA4H (ENSCAFG00845024692) HAL (ENSCAFG00845024266) #22 AMDHD1 (ENSCAFG00845024156) CCDC38 (ENSCAFG00845024078) ENSCAFG00845023974 NTN4 (ENSCAFG00845023731) USP44 (ENSCAFG00845023662) METAP2 (ENSCAFG00845023414) VEZT (ENSCAFG00845023106) FGD6 (ENSCAFG00845022871) NR2C1 (ENSCAFG00845022744) NDUFA12 (ENSCAFG00845022634) TMCC3 (ENSCAFG00845022396) CEP83 (ENSCAFG00845022275) PLXNC1 (ENSCAFG00845021595) ENSCAFG00845021424 CRADD (ENSCAFG00845021328) Dingo MODERN SPECIES 277 ENSCAFG00020024201 ENSCAFG00020024199 APAF1 (ENSCAFG00020023804) ENSCAFG00020023757 ENSCAFG00020023755 ENSCAFG00020023754 ENSCAFG00020023737 ENSCAFG00020023735 ENSCAFG00020023734 ENSCAFG00020023728 ENSCAFG00020023725 ENSCAFG00020023724 CDK17 (ENSCAFG00020023345) ELK3 (ENSCAFG00020023280) LTA4H (ENSCAFG00020023272) HAL (ENSCAFG00020023260) #22 AMDHD1 (ENSCAFG00020023254) CCDC38 (ENSCAFG00020023245) ENSCAFG00020023242 NTN4 (ENSCAFG00020023240) USP44 (ENSCAFG00020023237) METAP2 (ENSCAFG00020023202) VEZT (ENSCAFG00020023189) ENSCAFG00020023187 FGD6 (ENSCAFG00020023183) NR2C1 (ENSCAFG00020023077) NDUFA12 (ENSCAFG00020023057) TMCC3 (ENSCAFG00020023056) CEP83 (ENSCAFG00020023051) PLXNC1 (ENSCAFG00020023009) ENSCAFG00020022981 Red fox MODERN SPECIES 95 ANKS1B (ENSVVUG00000018575) ENSVVUG00000018614 ENSVVUG00000018626 APAF1 (ENSVVUG00000018651) IKBIP (ENSVVUG00000018697) SLC25A3 (ENSVVUG00000018699) TMPO (ENSVVUG00000018704) ENSVVUG00000018771 ENSVVUG00000018822 NEDD1 (ENSVVUG00000018845) ENSVVUG00000018854 CFAP54 (ENSVVUG00000018862) CDK17 (ENSVVUG00000018938) ELK3 (ENSVVUG00000018961) LTA4H (ENSVVUG00000018982) HAL (ENSVVUG00000019000) #22 AMDHD1 (ENSVVUG00000019020) CCDC38 (ENSVVUG00000019048) ENSVVUG00000019056 NTN4 (ENSVVUG00000019062) USP44 (ENSVVUG00000019080) METAP2 (ENSVVUG00000019091) ENSVVUG00000019103 VEZT (ENSVVUG00000019120) FGD6 (ENSVVUG00000019129) NR2C1 (ENSVVUG00000019215) NDUFA12 (ENSVVUG00000019220) Felidae ANCESTRAL SPECIES 2 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848.n ENSGT00940000157275 ENSGT00950000185173 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00900000143786 Panthera ANCESTRAL SPECIES ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00910000144211.n.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848.n ENSGT00940000157275 ENSGT00950000185173 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00900000143786 Tiger MODERN SPECIES 229 ACTR6 (ENSPTIG00000012245) BLTP3B (ENSPTIG00000009469) ENSPTIG00000007650 ENSPTIG00000006936 GARIN6 (ENSPTIG00000006653) ENSPTIG00000021952 APAF1 (ENSPTIG00000016200) IKBIP (ENSPTIG00000015567) SLC25A3 (ENSPTIG00000011200) ENSPTIG00000008730 NEDD1 (ENSPTIG00000021449) CFAP54 (ENSPTIG00000018945) CDK17 (ENSPTIG00000016038) ELK3 (ENSPTIG00000015155) LTA4H (ENSPTIG00000014149) HAL (ENSPTIG00000011595) #22 AMDHD1 (ENSPTIG00000010533) CCDC38 (ENSPTIG00000008121) SNRPF (ENSPTIG00000007520) NTN4 (ENSPTIG00000003109) USP44 (ENSPTIG00000022000) METAP2 (ENSPTIG00000021175) VEZT (ENSPTIG00000019201) FGD6 (ENSPTIG00000017264) NR2C1 (ENSPTIG00000014243) ENSPTIG00000013446 TMCC3 (ENSPTIG00000012501) CEP83 (ENSPTIG00000008825) ENSPTIG00000005416 CRADD (ENSPTIG00000000280) SOCS2 (ENSPTIG00000020683) Panthera_a ANCESTRAL SPECIES 12 ENSGT00940000158037 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848.n ENSGT00940000157275 ENSGT00950000185173 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00900000143786 leopard MODERN SPECIES 13 SCYL2 (ENSPPRG00000007538) ACTR6 (ENSPPRG00000008867) BLTP3B (ENSPPRG00000009836) ENSPPRG00000010804 GARIN6 (ENSPPRG00000011321) ENSPPRG00000018210 APAF1 (ENSPPRG00000003220) IKBIP (ENSPPRG00000003826) SLC25A3 (ENSPPRG00000005899) ENSPPRG00000007580 NEDD1 (ENSPPRG00000011575) CFAP54 (ENSPPRG00000018732) CDK17 (ENSPPRG00000022789) ELK3 (ENSPPRG00000000266) LTA4H (ENSPPRG00000001567) HAL (ENSPPRG00000004514) #22 AMDHD1 (ENSPPRG00000004816) CCDC38 (ENSPPRG00000005275) SNRPF (ENSPPRG00000005875) NTN4 (ENSPPRG00000009020) USP44 (ENSPPRG00000011564) METAP2 (ENSPPRG00000015368) VEZT (ENSPPRG00000017038) FGD6 (ENSPPRG00000023121) NR2C1 (ENSPPRG00000000725) ENSPPRG00000001562 TMCC3 (ENSPPRG00000002306) ENSPPRG00000002956 CEP83 (ENSPPRG00000005368) PLXNC1 (ENSPPRG00000008196) ENSPPRG00000009352 lion MODERN SPECIES 7 SCYL2 (ENSPLOG00000015630) ACTR6 (ENSPLOG00000015509) BLTP3B (ENSPLOG00000015400) ENSPLOG00000015233 GARIN6 (ENSPLOG00000015188) ENSPLOG00000014281 APAF1 (ENSPLOG00000013981) IKBIP (ENSPLOG00000013888) SLC25A3 (ENSPLOG00000013735) ENSPLOG00000013590 NEDD1 (ENSPLOG00000013460) CFAP54 (ENSPLOG00000013406) CDK17 (ENSPLOG00000013254) ELK3 (ENSPLOG00000013162) LTA4H (ENSPLOG00000012778) HAL (ENSPLOG00000012331) #22 AMDHD1 (ENSPLOG00000012251) CCDC38 (ENSPLOG00000012053) SNRPF (ENSPLOG00000011995) NTN4 (ENSPLOG00000011750) USP44 (ENSPLOG00000011670) METAP2 (ENSPLOG00000011232) VEZT (ENSPLOG00000011105) FGD6 (ENSPLOG00000010832) NR2C1 (ENSPLOG00000010742) NDUFA12 (ENSPLOG00000005399) TMCC3 (ENSPLOG00000005312) CEP83 (ENSPLOG00000005293) PLXNC1 (ENSPLOG00000005206) CRADD (ENSPLOG00000005166) SOCS2 (ENSPLOG00000005147) Cat MODERN SPECIES 238 SCYL2 (ENSFCAG00000028913) ACTR6 (ENSFCAG00000025056) BLTP3B (ENSFCAG00000004669) GARIN6 (ENSFCAG00000027306) ENSFCAG00000049184 ANKS1B (ENSFCAG00000040012) APAF1 (ENSFCAG00000010807) IKBIP (ENSFCAG00000040544) SLC25A3 (ENSFCAG00000027994) TMPO (ENSFCAG00000030306) NEDD1 (ENSFCAG00000031627) CFAP54 (ENSFCAG00000011027) CDK17 (ENSFCAG00000027060) ELK3 (ENSFCAG00000010747) LTA4H (ENSFCAG00000018521) HAL (ENSFCAG00000005407) #22 AMDHD1 (ENSFCAG00000005404) CCDC38 (ENSFCAG00000005400) ENSFCAG00000029966 NTN4 (ENSFCAG00000030428) USP44 (ENSFCAG00000009656) METAP2 (ENSFCAG00000029864) ENSFCAG00000045925 VEZT (ENSFCAG00000008353) FGD6 (ENSFCAG00000008351) NR2C1 (ENSFCAG00000026108) ENSFCAG00000023050 TMCC3 (ENSFCAG00000009894) CEP83 (ENSFCAG00000027845) PLXNC1 (ENSFCAG00000036479) ENSFCAG00000051463 Laurasiatheria_c ANCESTRAL SPECIES 5 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157983 ENSGT00390000010491.lb Chiroptera ANCESTRAL SPECIES 23 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.c ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 Microchiroptera ANCESTRAL SPECIES 8 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.c ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000161860 ENSGT00390000007725.A.a ENSGT00940000155840.C ENSGT00940000155810 ENSGT00940000155083.b Greater horseshoe bat MODERN SPECIES 1 ACTR6 (ENSRFEG00010017580) BLTP3B (ENSRFEG00010017660) ENSRFEG00010017816 ANKS1B (ENSRFEG00010017872) ENSRFEG00010018324 ENSRFEG00010018331 APAF1 (ENSRFEG00010018386) ENSRFEG00010018576 ENSRFEG00010018608 ENSRFEG00010018650 NEDD1 (ENSRFEG00010018827) CFAP54 (ENSRFEG00010018994) CDK17 (ENSRFEG00010019452) ELK3 (ENSRFEG00010019517) LTA4H (ENSRFEG00010019582) HAL (ENSRFEG00010019753) #22 AMDHD1 (ENSRFEG00010019814) CCDC38 (ENSRFEG00010019857) SNRPF (ENSRFEG00010019886) NTN4 (ENSRFEG00010019959) USP44 (ENSRFEG00010020037) METAP2 (ENSRFEG00010000487) VEZT (ENSRFEG00010000650) ENSRFEG00010000705 FGD6 (ENSRFEG00010000721) NR2C1 (ENSRFEG00010000764) NDUFA12 (ENSRFEG00010000814) KCNA5 (ENSRFEG00010000848) NTF3 (ENSRFEG00010000870) ANO2 (ENSRFEG00010000920) VWF (ENSRFEG00010001025) Microbat MODERN SPECIES 947 ACTR6 (ENSMLUG00000022723) ENSMLUG00000016072 ENSMLUG00000008394 ENSMLUG00000025382 APAF1 (ENSMLUG00000008348) ENSMLUG00000008339 SLC25A3 (ENSMLUG00000008330) TMPO (ENSMLUG00000000074) NEDD1 (ENSMLUG00000001626) ENSMLUG00000011945 ENSMLUG00000002415 CDK17 (ENSMLUG00000002405) ENSMLUG00000024585 ELK3 (ENSMLUG00000002400) LTA4H (ENSMLUG00000013624) HAL (ENSMLUG00000013605) #22 AMDHD1 (ENSMLUG00000013596) CCDC38 (ENSMLUG00000013584) ENSMLUG00000013577 NTN4 (ENSMLUG00000000874) USP44 (ENSMLUG00000006043) METAP2 (ENSMLUG00000006036) ENSMLUG00000030570 VEZT (ENSMLUG00000015852) FGD6 (ENSMLUG00000015828) NR2C1 (ENSMLUG00000015807) NDUFA12 (ENSMLUG00000027131) KCNA5 (ENSMLUG00000015804) NTF3 (ENSMLUG00000012482) ANO2 (ENSMLUG00000015973) VWF (ENSMLUG00000015993) Megabat MODERN SPECIES 246 LTA4H (ENSPVAG00000009040) HAL (ENSPVAG00000009039) #22 AMDHD1 (ENSPVAG00000009038) CCDC38 (ENSPVAG00000009037) SNRPF (ENSPVAG00000009036) NTN4 (ENSPVAG00000009035) USP44 (ENSPVAG00000009034) METAP2 (ENSPVAG00000009033) VEZT (ENSPVAG00000009031) Equus ANCESTRAL SPECIES 21 ENSGT00940000158187 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275.c ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157983 ENSGT00390000010491.lb Donkey MODERN SPECIES 11 SCYL2 (ENSEASG00005019917) DEPDC4 (ENSEASG00005019914) ACTR6 (ENSEASG00005019911) BLTP3B (ENSEASG00005019907) ANKS1B (ENSEASG00005019623) APAF1 (ENSEASG00005019574) IKBIP (ENSEASG00005019570) SLC25A3 (ENSEASG00005019560) ENSEASG00005019557 NEDD1 (ENSEASG00005019539) CFAP54 (ENSEASG00005019535) CDK17 (ENSEASG00005019532) ELK3 (ENSEASG00005019530) ENSEASG00005019526 LTA4H (ENSEASG00005019525) HAL (ENSEASG00005019524) #22 AMDHD1 (ENSEASG00005019523) CCDC38 (ENSEASG00005019522) SNRPF (ENSEASG00005038188) NTN4 (ENSEASG00005019520) USP44 (ENSEASG00005019519) METAP2 (ENSEASG00005019413) ENSEASG00005019402 ENSEASG00005028645 FGD6 (ENSEASG00005019390) NR2C1 (ENSEASG00005019381) NDUFA12 (ENSEASG00005019380) ENSEASG00005006922 ENSEASG00005019376 PLXNC1 (ENSEASG00005019375) SOCS2 (ENSEASG00005019365) Horse MODERN SPECIES 20 DEPDC4 (ENSECAG00000019501) ACTR6 (ENSECAG00000017041) BLTP3B (ENSECAG00000002701) ENSECAG00000056139 ANKS1B (ENSECAG00000011449) APAF1 (ENSECAG00000024703) SLC25A3 (ENSECAG00000056021) IKBIP (ENSECAG00000024371) TMPO (ENSECAG00000023461) NEDD1 (ENSECAG00000013725) CFAP54 (ENSECAG00000009697) CDK17 (ENSECAG00000021679) ELK3 (ENSECAG00000017760) ENSECAG00000045733 LTA4H (ENSECAG00000008767) HAL (ENSECAG00000008161) #22 AMDHD1 (ENSECAG00000024293) CCDC38 (ENSECAG00000021801) SNRPF (ENSECAG00000051252) NTN4 (ENSECAG00000011891) USP44 (ENSECAG00000010123) METAP2 (ENSECAG00000015390) VEZT (ENSECAG00000002783) FGD6 (ENSECAG00000021075) NR2C1 (ENSECAG00000000645) NDUFA12 (ENSECAG00000015836) TMCC3 (ENSECAG00000011697) CEP83 (ENSECAG00000008428) PLXNC1 (ENSECAG00000022971) SOCS2 (ENSECAG00000006833) ENSECAG00000053683 Artiodactyla ANCESTRAL SPECIES 6 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Suina ANCESTRAL SPECIES 4 ENSGT00940000158037 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Chacoan peccary MODERN SPECIES 873 NR1H4 (ENSCWAG00000019166) SLC17A8 (ENSCWAG00000019025) SCYL2 (ENSCWAG00000018942) ACTR6 (ENSCWAG00000018845) BLTP3B (ENSCWAG00000018723) ANKS1B (ENSCWAG00000014719) APAF1 (ENSCWAG00000012901) IKBIP (ENSCWAG00000012749) SLC25A3 (ENSCWAG00000012689) ENSCWAG00000012509 NEDD1 (ENSCWAG00000012318) CFAP54 (ENSCWAG00000011753) CDK17 (ENSCWAG00000011649) ELK3 (ENSCWAG00000011586) LTA4H (ENSCWAG00000011298) HAL (ENSCWAG00000017480) #22 AMDHD1 (ENSCWAG00000017397) CCDC38 (ENSCWAG00000017292) SNRPF (ENSCWAG00000017245) NTN4 (ENSCWAG00000017154) USP44 (ENSCWAG00000017077) METAP2 (ENSCWAG00000016713) ENSCWAG00000016653 VEZT (ENSCWAG00000016620) FGD6 (ENSCWAG00000016343) NR2C1 (ENSCWAG00000016281) ENSCWAG00000016201 TMCC3 (ENSCWAG00000016118) CEP83 (ENSCWAG00000016082) PLXNC1 (ENSCWAG00000015821) CRADD (ENSCWAG00000015724) Pig MODERN SPECIES 13 ANKS1B (ENSSSCG00000022083) ENSSSCG00000050712 ENSSSCG00000000883 ENSSSCG00000050703 APAF1 (ENSSSCG00000000884) IKBIP (ENSSSCG00000038772) SLC25A3 (ENSSSCG00000000886) TMPO (ENSSSCG00000038487) ENSSSCG00000036349 NEDD1 (ENSSSCG00000000890) CFAP54 (ENSSSCG00000033574) ENSSSCG00000050899 CDK17 (ENSSSCG00000028182) ELK3 (ENSSSCG00000023803) LTA4H (ENSSSCG00000000891) HAL (ENSSSCG00000000892) #22 AMDHD1 (ENSSSCG00000000893) CCDC38 (ENSSSCG00000000894) SNRPF (ENSSSCG00000000895) NTN4 (ENSSSCG00000000896) USP44 (ENSSSCG00000021307) METAP2 (ENSSSCG00000030608) ENSSSCG00000041944 ENSSSCG00000061426 VEZT (ENSSSCG00000000900) FGD6 (ENSSSCG00000000901) NR2C1 (ENSSSCG00000000902) ENSSSCG00000000905 TMCC3 (ENSSSCG00000000906) CEP83 (ENSSSCG00000024563) PLXNC1 (ENSSSCG00000000907) Artiodactyla_a ANCESTRAL SPECIES 5 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Camelidae ANCESTRAL SPECIES 39 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Arabian camel MODERN SPECIES 3 SCYL2 (ENSCDRG00005017362) ENSCDRG00005017531 ACTR6 (ENSCDRG00005017579) BLTP3B (ENSCDRG00005017658) ANKS1B (ENSCDRG00005017933) ENSCDRG00005018765 APAF1 (ENSCDRG00005018836) IKBIP (ENSCDRG00005019237) SLC25A3 (ENSCDRG00005019299) ENSCDRG00005019355 NEDD1 (ENSCDRG00005019455) CFAP54 (ENSCDRG00005019532) CDK17 (ENSCDRG00005019682) ELK3 (ENSCDRG00005019714) LTA4H (ENSCDRG00005019737) HAL (ENSCDRG00005019802) #22 AMDHD1 (ENSCDRG00005019847) CCDC38 (ENSCDRG00005019867) SNRPF (ENSCDRG00005019902) NTN4 (ENSCDRG00005019926) USP44 (ENSCDRG00005019970) METAP2 (ENSCDRG00005020004) VEZT (ENSCDRG00005020149) ENSCDRG00005020169 FGD6 (ENSCDRG00005020179) NR2C1 (ENSCDRG00005020214) ENSCDRG00005020236 TMCC3 (ENSCDRG00005020264) CEP83 (ENSCDRG00005020280) ENSCDRG00005020305 PLXNC1 (ENSCDRG00005020326) Alpaca MODERN SPECIES 3554 LTA4H (ENSVPAG00000008716) HAL (ENSVPAG00000008715) #22 AMDHD1 (ENSVPAG00000008714) CCDC38 (ENSVPAG00000008713) SNRPF (ENSVPAG00000008712) NTN4 (ENSVPAG00000008711) USP44 (ENSVPAG00000008710) METAP2 (ENSVPAG00000008709) Artiodactyla_b ANCESTRAL SPECIES 5 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Pecora ANCESTRAL SPECIES 3 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160763 ENSGT00940000160217 ENSGT01100000263494.a.a.a.a.a.d.b.d ENSGT01100000263494.a.a.a.a.a.d.b.c ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.a ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.b ENSGT01100000263494.a.a.a.a.a.d.a.i.b.j ENSGT01100000263494.a.a.a.a.a.d.a.i.b.i ENSGT01100000263494.a.a.a.a.a.c.b ENSGT01040000240406.B ENSGT01050000244815.A.c.b.a.a.a.b Yarkand deer MODERN SPECIES 14 BLTP3B (ENSCHYG00000022150) ENSCHYG00000022096 ANKS1B (ENSCHYG00000020900) APAF1 (ENSCHYG00000019906) IKBIP (ENSCHYG00000019783) ENSCHYG00000019744 ENSCHYG00000019480 ENSCHYG00000019270 ENSCHYG00000019199 NEDD1 (ENSCHYG00000018895) CFAP54 (ENSCHYG00000018187) ENSCHYG00000018145 CDK17 (ENSCHYG00000017640) ELK3 (ENSCHYG00000017527) LTA4H (ENSCHYG00000017296) HAL (ENSCHYG00000016993) #22 AMDHD1 (ENSCHYG00000016862) CCDC38 (ENSCHYG00000016799) SNRPF (ENSCHYG00000016734) NTN4 (ENSCHYG00000016317) TESPA1 (ENSCHYG00000016220) ENSCHYG00000016191 NEUROD4 (ENSCHYG00000016165) ENSCHYG00000016135 ENSCHYG00000016094 ENSCHYG00000016038 ENSCHYG00000016010 ENSCHYG00000015936 ENSCHYG00000015880 ENSCHYG00000015823 ENSCHYG00000015793 Percora_a ANCESTRAL SPECIES 3 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160763 ENSGT00940000160217 ENSGT01100000263494.a.a.a.a.a.d.b.d ENSGT01100000263494.a.a.a.a.a.d.b.c ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.a ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.b ENSGT01100000263494.a.a.a.a.a.d.a.i.b.j ENSGT01100000263494.a.a.a.a.a.c.a ENSGT01100000263494.a.a.a.a.a.d.a.i.b.i.a ENSGT01100000263494.a.a.a.a.a.d.a.i.b.i.b ENSGT01100000263494.a.a.a.a.a.d.a.i.a.b Siberian musk deer MODERN SPECIES 1256 SCYL2 (ENSMMSG00000023538) ACTR6 (ENSMMSG00000023566) BLTP3B (ENSMMSG00000023582) ANKS1B (ENSMMSG00000023670) ENSMMSG00000024040 APAF1 (ENSMMSG00000024050) ENSMMSG00000024079 SLC25A3 (ENSMMSG00000024085) ENSMMSG00000024096 NEDD1 (ENSMMSG00000024112) ENSMMSG00000024121 ENSMMSG00000024127 CDK17 (ENSMMSG00000024131) ELK3 (ENSMMSG00000024140) LTA4H (ENSMMSG00000024150) HAL (ENSMMSG00000024168) #22 AMDHD1 (ENSMMSG00000024178) CCDC38 (ENSMMSG00000024184) SNRPF (ENSMMSG00000024194) NTN4 (ENSMMSG00000024201) TESPA1 (ENSMMSG00000024211) NEUROD4 (ENSMMSG00000024212) ENSMMSG00000024215 ENSMMSG00000024218 ENSMMSG00000024219 ENSMMSG00000024221 ENSMMSG00000024223 ENSMMSG00000024226 ENSMMSG00000024228 ENSMMSG00000024230 ENSMMSG00000024232 Bovidae ANCESTRAL SPECIES 3 ENSGT00600000084428.b ENSGT00940000170157 ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160763 ENSGT00940000160217 ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.a ENSGT01100000263494.a.a.a.a.a.d.b.d ENSGT01100000263494.a.a.a.a.a.d.b.c ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.b ENSGT01100000263494.a.a.a.a.a.d.a.i.b.j ENSGT01100000263494.a.a.a.a.a.d.a.i.b.i.a ENSGT01100000263494.a.a.a.a.a.d.a.i.b.i.b ENSGT01100000263494.a.a.a.a.a.d.a.i.a.b Caprinae ANCESTRAL SPECIES ENSGT00600000084428.b ENSGT00940000170157 ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000161899.q.a ENSGT00940000157710 ENSGT00390000003710.c.a.b.a.b.h ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160763 ENSGT00940000160217 ENSGT01100000263494.a.a.a.a.a.d.b.d ENSGT01100000263494.a.a.a.a.a.d.b.c ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.a.c ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.b ENSGT01100000263494.a.a.a.a.a.d.a.i.b.j ENSGT01100000263494.a.a.a.a.a.d.a.i.b.i.a ENSGT01100000263494.a.a.a.a.a.d.a.i.b.i.b ENSGT01100000263494.a.a.a.a.a.d.a.i.a.b ENSGT01100000263494.a.a.a.a.a.c.b Goat MODERN SPECIES 24 ENSCHIG00000011894 ENSCHIG00000011860 ENSCHIG00000021672 ENSCHIG00000026522 APAF1 (ENSCHIG00000026050) ENSCHIG00000009665 IKBIP (ENSCHIG00000018224) SLC25A3 (ENSCHIG00000026853) ENSCHIG00000011297 ENSCHIG00000007303 NEDD1 (ENSCHIG00000024930) CFAP54 (ENSCHIG00000025886) CDK17 (ENSCHIG00000016767) ELK3 (ENSCHIG00000020731) LTA4H (ENSCHIG00000017470) HAL (ENSCHIG00000018871) #22 AMDHD1 (ENSCHIG00000023934) CCDC38 (ENSCHIG00000008867) ENSCHIG00000017139 NTN4 (ENSCHIG00000026764) TESPA1 (ENSCHIG00000010350) NEUROD4 (ENSCHIG00000000520) ENSCHIG00000026832 ENSCHIG00000012759 ENSCHIG00000018357 ENSCHIG00000025268 ENSCHIG00000010533 ENSCHIG00000011726 ENSCHIG00000012251 ENSCHIG00000013688 ENSCHIG00000013321 Rambouillet Sheep MODERN SPECIES 19 ENSOARG00020013344 ENSOARG00020013303 ENSOARG00020013188 ENSOARG00020013132 ENSOARG00020013011 ENSOARG00020012977 APAF1 (ENSOARG00020011843) ENSOARG00020011775 IKBIP (ENSOARG00020011666) SLC25A3 (ENSOARG00020011479) ENSOARG00020011279 NEDD1 (ENSOARG00020010921) CDK17 (ENSOARG00020009770) ELK3 (ENSOARG00020009713) LTA4H (ENSOARG00020009366) HAL (ENSOARG00020008798) #22 AMDHD1 (ENSOARG00020008726) CCDC38 (ENSOARG00020008604) SNRPF (ENSOARG00020008550) NTN4 (ENSOARG00020008405) TESPA1 (ENSOARG00020008337) NEUROD4 (ENSOARG00020008315) ENSOARG00020008288 ENSOARG00020008269 ENSOARG00020008251 ENSOARG00020008235 ENSOARG00020008206 ENSOARG00020008184 ENSOARG00020008153 ENSOARG00020008139 ENSOARG00020008119 Bovinae ANCESTRAL SPECIES 10 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000170157 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160763 ENSGT00940000160217 ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.a ENSGT01100000263494.a.a.a.a.a.d.b.d ENSGT01100000263494.a.a.a.a.a.d.b.c ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.b ENSGT01100000263494.a.a.a.a.a.d.a.i.b.i.a.b ENSGT01100000263494.a.a.a.a.a.d.a.i.b.j.a ENSGT01100000263494.a.a.a.a.a.d.a.i.b.i.b.b ENSGT01100000263494.a.a.a.a.a.d.a.i.b.i.b.a Bos ANCESTRAL SPECIES 2 ENSGT00600000084428.b ENSGT00940000170157 ENSGT00940000154572.`c ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.b ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000164757 ENSGT00940000156615 ENSGT00940000160763 ENSGT00940000160217 ENSGT01100000263494.a.a.a.a.a.d.b.c.b ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.a.b ENSGT01100000263494.a.a.a.a.a.d.b.d ENSGT01100000263494.a.a.a.a.a.d.b.c.a ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.a.a ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.b ENSGT01100000263494.a.a.a.a.a.d.a.i.b.j.a ENSGT01100000263494.a.a.a.a.a.d.a.i.b.i.b.b Bos_a ANCESTRAL SPECIES 3 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.b ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT01100000263506.a.e.a.a.a.a.a.d.a.b ENSGT01100000263480.a.a.a.a.b.a.a.a.a.a.a.b ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000164757 ENSGT00940000156615 ENSGT00940000160763 ENSGT00940000160217 ENSGT01100000263494.a.a.a.a.a.d.b.c.a ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.b ENSGT01100000263494.a.a.a.a.a.d.a.i.b.i.a.a.a ENSGT01100000263494.a.a.a.a.a.d.a.i.b.i.b.b ENSGT01040000240406.B.m ENSGT01050000244815.A.c.b.a.a.a.b ENSGT01090000260006.C.g.a ENSGT01090000260006.E.a.a Wild yak MODERN SPECIES 997 CFAP54 (ENSBMUG00000018951) CDK17 (ENSBMUG00000018883) ELK3 (ENSBMUG00000018850) LTA4H (ENSBMUG00000018822) HAL (ENSBMUG00000018715) #22 AMDHD1 (ENSBMUG00000018669) CCDC38 (ENSBMUG00000018652) ENSBMUG00000018633 NTN4 (ENSBMUG00000018526) TESPA1 (ENSBMUG00000018473) NEUROD4 (ENSBMUG00000018453) Domestic yak MODERN SPECIES 24 BLTP3B (ENSBGRG00000003515) ANKS1B (ENSBGRG00000003686) ENSBGRG00000004690 APAF1 (ENSBGRG00000004769) IKBIP (ENSBGRG00000005194) SLC25A3 (ENSBGRG00000005230) ENSBGRG00000005289 ENSBGRG00000005328 ENSBGRG00000005452 ENSBGRG00000005471 NEDD1 (ENSBGRG00000005492) CFAP54 (ENSBGRG00000005654) CDK17 (ENSBGRG00000005998) ELK3 (ENSBGRG00000006178) LTA4H (ENSBGRG00000006246) HAL (ENSBGRG00000006625) #22 AMDHD1 (ENSBGRG00000006730) CCDC38 (ENSBGRG00000006791) SNRPF (ENSBGRG00000006894) ENSBGRG00000006956 NTN4 (ENSBGRG00000007052) NEUROD4 (ENSBGRG00000007403) TESPA1 (ENSBGRG00000007436) ENSBGRG00000007579 ENSBGRG00000007600 ENSBGRG00000007619 OR10A7 (ENSBGRG00000007666) ENSBGRG00000007681 OR6C75 (ENSBGRG00000007768) OR6C76 (ENSBGRG00000007911) ENSBGRG00000008071 Bos_b ANCESTRAL SPECIES 22 ENSGT00940000154572.`c ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.b ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT01100000263506.a.e.a.a.a.a.a.d.a.b ENSGT01100000263480.a.a.a.a.b.a.a.a.a.a.a.b ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160763 ENSGT00940000160217 ENSGT01100000263494.a.a.a.a.a.d.b.d.d ENSGT01100000263494.a.a.a.a.a.d.b.c.b ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.a.b ENSGT01100000263494.a.a.a.a.a.d.b.d.c ENSGT01100000263494.a.a.a.a.a.d.b.c.a ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.a.a ENSGT01100000263494.a.a.a.a.a.d.a.i.a.a.b ENSGT01100000263494.a.a.a.a.a.d.a.i.b.j.a ENSGT01100000263494.a.a.a.a.a.d.a.i.b.i.b.b Hybrid Bos Indicus MODERN SPECIES 24 ENSBIXG00005018751 ANKS1B (ENSBIXG00005018683) ENSBIXG00005002963 ENSBIXG00005018300 ENSBIXG00005018298 APAF1 (ENSBIXG00005018257) IKBIP (ENSBIXG00005018134) SLC25A3 (ENSBIXG00005005592) ENSBIXG00005005430 NEDD1 (ENSBIXG00005017834) ENSBIXG00005017766 CFAP54 (ENSBIXG00005017724) CDK17 (ENSBIXG00005002870) ELK3 (ENSBIXG00005017581) LTA4H (ENSBIXG00005017506) HAL (ENSBIXG00005002811) #22 AMDHD1 (ENSBIXG00005017212) CCDC38 (ENSBIXG00005002784) NTN4 (ENSBIXG00005017067) TESPA1 (ENSBIXG00005016988) NEUROD4 (ENSBIXG00005016943) ENSBIXG00005016933 ENSBIXG00005016930 ENSBIXG00005007039 ENSBIXG00005016914 ENSBIXG00005016903 ENSBIXG00005016893 ENSBIXG00005016886 ENSBIXG00005016876 ENSBIXG00005016858 ENSBIXG00005002726 Cow MODERN SPECIES 24 ENSBTAG00000025812 ENSBTAG00000030994 APAF1 (ENSBTAG00000021661) IKBIP (ENSBTAG00000021660) SLC25A3 (ENSBTAG00000012890) TMPO (ENSBTAG00000004240) ENSBTAG00000045919 ENSBTAG00000051433 NEDD1 (ENSBTAG00000001894) CFAP54 (ENSBTAG00000015792) ENSBTAG00000052520 ENSBTAG00000002251 CDK17 (ENSBTAG00000001510) ELK3 (ENSBTAG00000001509) LTA4H (ENSBTAG00000016415) HAL (ENSBTAG00000016276) #22 AMDHD1 (ENSBTAG00000016275) CCDC38 (ENSBTAG00000016274) SNRPF (ENSBTAG00000016271) ENSBTAG00000052178 NTN4 (ENSBTAG00000003183) TESPA1 (ENSBTAG00000005120) NEUROD4 (ENSBTAG00000005626) OR9K1B (ENSBTAG00000049342) OR9K2F (ENSBTAG00000049374) OR9K1 (ENSBTAG00000048994) OR9K15 (ENSBTAG00000053957) OR9K2 (ENSBTAG00000046317) ENSBTAG00000054855 OR9K2C (ENSBTAG00000050988) ENSBTAG00000045722 American bison MODERN SPECIES 2996 NEDD1 (ENSBBBG00000006133) ENSBBBG00000008968 ENSBBBG00000023497 CDK17 (ENSBBBG00000023554) ELK3 (ENSBBBG00000023574) LTA4H (ENSBBBG00000023666) HAL (ENSBBBG00000023763) #22 AMDHD1 (ENSBBBG00000023777) CCDC38 (ENSBBBG00000023790) ENSBBBG00000023798 NTN4 (ENSBBBG00000006207) TESPA1 (ENSBBBG00000008314) NEUROD4 (ENSBBBG00000023883) ENSBBBG00000000313 ENSBBBG00000000308 ENSBBBG00000000296 ENSBBBG00000023900 ENSBBBG00000008805 ENSBBBG00000023908 ENSBBBG00000008183 ENSBBBG00000023919 ENSBBBG00000024021 Cetacea ANCESTRAL SPECIES 8 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000003526.b ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848.j.a ENSGT00510000047418.m.b ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Blue whale MODERN SPECIES 1 SCYL2 (ENSBMSG00010006075) ACTR6 (ENSBMSG00010006031) BLTP3B (ENSBMSG00010006007) ENSBMSG00010010902 ANKS1B (ENSBMSG00010010048) APAF1 (ENSBMSG00010009889) IKBIP (ENSBMSG00010009856) ENSBMSG00010009830 ENSBMSG00010009790 ENSBMSG00010009758 NEDD1 (ENSBMSG00010009710) ENSBMSG00010009687 CDK17 (ENSBMSG00010009667) ELK3 (ENSBMSG00010009646) LTA4H (ENSBMSG00010009606) HAL (ENSBMSG00010009502) #22 AMDHD1 (ENSBMSG00010009480) CCDC38 (ENSBMSG00010009469) SNRPF (ENSBMSG00010009458) NTN4 (ENSBMSG00010009437) USP44 (ENSBMSG00010009428) METAP2 (ENSBMSG00010009403) VEZT (ENSBMSG00010009384) FGD6 (ENSBMSG00010009375) NR2C1 (ENSBMSG00010009358) ENSBMSG00010009348 ENSBMSG00010009334 TMCC3 (ENSBMSG00010009320) CEP83 (ENSBMSG00010009304) PLXNC1 (ENSBMSG00010009279) ENSBMSG00010009257 Odontoceti ANCESTRAL SPECIES 7 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000003526.b ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848.j.a ENSGT00510000047418.m.b ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Sperm whale MODERN SPECIES 17 SCYL2 (ENSPCTG00005011005) DEPDC4 (ENSPCTG00005010961) ACTR6 (ENSPCTG00005010801) BLTP3B (ENSPCTG00005010599) ANKS1B (ENSPCTG00005007818) APAF1 (ENSPCTG00005007208) IKBIP (ENSPCTG00005007080) SLC25A3 (ENSPCTG00005007003) TMPO (ENSPCTG00005006842) ENSPCTG00005006737 NEDD1 (ENSPCTG00005006658) ENSPCTG00005006592 CDK17 (ENSPCTG00005006524) ELK3 (ENSPCTG00005006435) LTA4H (ENSPCTG00005006181) HAL (ENSPCTG00005005851) #22 AMDHD1 (ENSPCTG00005005792) CCDC38 (ENSPCTG00005005736) SNRPF (ENSPCTG00005005710) ENSPCTG00005005682 NTN4 (ENSPCTG00005005620) USP44 (ENSPCTG00005005553) METAP2 (ENSPCTG00005005341) ENSPCTG00005005290 VEZT (ENSPCTG00005005249) FGD6 (ENSPCTG00005005127) NR2C1 (ENSPCTG00005005039) NDUFA12 (ENSPCTG00005005007) ENSPCTG00005004984 TMCC3 (ENSPCTG00005004963) CEP83 (ENSPCTG00005022031) Odontoceti_a ANCESTRAL SPECIES 6 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.c ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848.j.a ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Dolphin MODERN SPECIES 626 LTA4H (ENSTTRG00000006074) HAL (ENSTTRG00000006073) #22 AMDHD1 (ENSTTRG00000006072) CCDC38 (ENSTTRG00000006071) ENSTTRG00000006070 Odontoceti_b ANCESTRAL SPECIES 7 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT01060000248806.a.a ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848.j.a ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Vaquita DUPLICATION Vaquita MODERN SPECIES 1 ANKS1B (ENSPSNG00000009944) ENSPSNG00000011090 GARIN6 (ENSPSNG00000011143) ENSPSNG00000011179 ENSPSNG00000011235 APAF1 (ENSPSNG00000011279) IKBIP (ENSPSNG00000011556) SLC25A3 (ENSPSNG00000011667) ENSPSNG00000011873 NEDD1 (ENSPSNG00000012119) ENSPSNG00000012324 CDK17 (ENSPSNG00000012485) ELK3 (ENSPSNG00000012591) LTA4H (ENSPSNG00000012687) ENSPSNG00000012774 #22 ENSPSNG00000012842 #22 AMDHD1 (ENSPSNG00000013010) SNRPF (ENSPSNG00000013139) NTN4 (ENSPSNG00000013221) USP44 (ENSPSNG00000013323) METAP2 (ENSPSNG00000013429) VEZT (ENSPSNG00000013799) FGD6 (ENSPSNG00000014016) NR2C1 (ENSPSNG00000014173) ENSPSNG00000014297 ENSPSNG00000014399 TMCC3 (ENSPSNG00000014446) CEP83 (ENSPSNG00000014569) PLXNC1 (ENSPSNG00000014704) CRADD (ENSPSNG00000015305) SOCS2 (ENSPSNG00000015360) Vaquita MODERN SPECIES 1 BLTP3B (ENSPSNG00000009410) ANKS1B (ENSPSNG00000009944) ENSPSNG00000011090 GARIN6 (ENSPSNG00000011143) ENSPSNG00000011179 ENSPSNG00000011235 APAF1 (ENSPSNG00000011279) IKBIP (ENSPSNG00000011556) SLC25A3 (ENSPSNG00000011667) ENSPSNG00000011873 NEDD1 (ENSPSNG00000012119) ENSPSNG00000012324 CDK17 (ENSPSNG00000012485) ELK3 (ENSPSNG00000012591) LTA4H (ENSPSNG00000012687) ENSPSNG00000012774 #22 ENSPSNG00000012842 #22 AMDHD1 (ENSPSNG00000013010) SNRPF (ENSPSNG00000013139) NTN4 (ENSPSNG00000013221) USP44 (ENSPSNG00000013323) METAP2 (ENSPSNG00000013429) VEZT (ENSPSNG00000013799) FGD6 (ENSPSNG00000014016) NR2C1 (ENSPSNG00000014173) ENSPSNG00000014297 ENSPSNG00000014399 TMCC3 (ENSPSNG00000014446) CEP83 (ENSPSNG00000014569) PLXNC1 (ENSPSNG00000014704) CRADD (ENSPSNG00000015305) Monodontidae ANCESTRAL SPECIES 6 ENSGT00720000108833 ENSGT00600000084428.b ENSGT01060000248806.a.a ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.c ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848.j.a ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Narwhal MODERN SPECIES 313 ACTR6 (ENSMMNG00015014364) BLTP3B (ENSMMNG00015014349) ENSMMNG00015014334 GARIN6 (ENSMMNG00015014319) ENSMMNG00015014315 ANKS1B (ENSMMNG00015014074) APAF1 (ENSMMNG00015013879) IKBIP (ENSMMNG00015013856) SLC25A3 (ENSMMNG00015013779) ENSMMNG00015013740 NEDD1 (ENSMMNG00015013645) CFAP54 (ENSMMNG00015013547) CDK17 (ENSMMNG00015013496) ELK3 (ENSMMNG00015013477) LTA4H (ENSMMNG00015013417) HAL (ENSMMNG00015013379) #22 AMDHD1 (ENSMMNG00015013360) CCDC38 (ENSMMNG00015013349) SNRPF (ENSMMNG00015013338) NTN4 (ENSMMNG00015013318) USP44 (ENSMMNG00015021841) METAP2 (ENSMMNG00015021824) VEZT (ENSMMNG00015021810) FGD6 (ENSMMNG00015021789) NR2C1 (ENSMMNG00015021774) ENSMMNG00015021766 TMCC3 (ENSMMNG00015021750) ENSMMNG00015021743 CEP83 (ENSMMNG00015021737) PLXNC1 (ENSMMNG00015021714) CRADD (ENSMMNG00015021699) Beluga whale DUPLICATION Beluga whale MODERN SPECIES 45 GARIN6 (ENSDLEG00000011803) ENSDLEG00000011790 ENSDLEG00000011784 ENSDLEG00000011773 ENSDLEG00000011766 APAF1 (ENSDLEG00000011640) IKBIP (ENSDLEG00000011613) SLC25A3 (ENSDLEG00000011582) TMPO (ENSDLEG00000011539) NEDD1 (ENSDLEG00000011471) CFAP54 (ENSDLEG00000011364) CDK17 (ENSDLEG00000011309) ELK3 (ENSDLEG00000011295) LTA4H (ENSDLEG00000011258) ENSDLEG00000011246 #22 ENSDLEG00000011227 #22 AMDHD1 (ENSDLEG00000011198) CCDC38 (ENSDLEG00000011130) ENSDLEG00000011111 NTN4 (ENSDLEG00000011084) USP44 (ENSDLEG00000011073) METAP2 (ENSDLEG00000011051) VEZT (ENSDLEG00000011007) FGD6 (ENSDLEG00000010971) NR2C1 (ENSDLEG00000010946) NDUFA12 (ENSDLEG00000010939) TMCC3 (ENSDLEG00000010912) CEP83 (ENSDLEG00000010818) PLXNC1 (ENSDLEG00000010685) Beluga whale MODERN SPECIES 45 ENSDLEG00000011815 GARIN6 (ENSDLEG00000011803) ENSDLEG00000011790 ENSDLEG00000011784 ENSDLEG00000011773 ENSDLEG00000011766 APAF1 (ENSDLEG00000011640) IKBIP (ENSDLEG00000011613) SLC25A3 (ENSDLEG00000011582) TMPO (ENSDLEG00000011539) NEDD1 (ENSDLEG00000011471) CFAP54 (ENSDLEG00000011364) CDK17 (ENSDLEG00000011309) ELK3 (ENSDLEG00000011295) LTA4H (ENSDLEG00000011258) ENSDLEG00000011246 #22 ENSDLEG00000011227 #22 AMDHD1 (ENSDLEG00000011198) CCDC38 (ENSDLEG00000011130) ENSDLEG00000011111 NTN4 (ENSDLEG00000011084) USP44 (ENSDLEG00000011073) METAP2 (ENSDLEG00000011051) VEZT (ENSDLEG00000011007) FGD6 (ENSDLEG00000010971) NR2C1 (ENSDLEG00000010946) NDUFA12 (ENSDLEG00000010939) TMCC3 (ENSDLEG00000010912) CEP83 (ENSDLEG00000010818) PLXNC1 (ENSDLEG00000010685) Euarchontoglires ANCESTRAL SPECIES 6 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000164546 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00900000143786 ENSGT00390000014448 Euarchontoglires_A ANCESTRAL SPECIES 5 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000164546 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Tree shrew MODERN SPECIES 1918 LTA4H (ENSTBEG00000015394) HAL (ENSTBEG00000014958) #22 AMDHD1 (ENSTBEG00000014727) CCDC38 (ENSTBEG00000014224) ENSTBEG00000014217 Glires ANCESTRAL SPECIES 4 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000164546 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Rodentia ANCESTRAL SPECIES 5 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000164546 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Rodentia_B ANCESTRAL SPECIES 3 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000164546 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Kangaroo rat MODERN SPECIES 322 ENSDORG00000028031 ENSDORG00000009254 Apaf1 (ENSDORG00000009253) Ikbip (ENSDORG00000011434) Slc25a3 (ENSDORG00000011431) ENSDORG00000023396 ENSDORG00000027259 Nedd1 (ENSDORG00000001204) ENSDORG00000026947 ENSDORG00000025279 ENSDORG00000005572 ENSDORG00000025108 Cdk17 (ENSDORG00000014799) Elk3 (ENSDORG00000025916) Lta4h (ENSDORG00000001735) Hal (ENSDORG00000001724) #22 Amdhd1 (ENSDORG00000001718) Ccdc38 (ENSDORG00000013751) Ntn4 (ENSDORG00000011529) Metap2 (ENSDORG00000000776) Vezt (ENSDORG00000006065) Fgd6 (ENSDORG00000006064) Nr2c1 (ENSDORG00000004257) Ndufa12 (ENSDORG00000001500) Tmcc3 (ENSDORG00000008687) Cep83 (ENSDORG00000012104) ENSDORG00000025370 ENSDORG00000025182 Cradd (ENSDORG00000011678) Socs2 (ENSDORG00000026257) Mrpl42 (ENSDORG00000015571) Myomorpha ANCESTRAL SPECIES 2 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000164546 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Muroidea ANCESTRAL SPECIES 5 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000164546 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Muroidea_A ANCESTRAL SPECIES 22 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000164546 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Cricetidae ANCESTRAL SPECIES 21 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000164546 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Cricetinae ANCESTRAL SPECIES 22 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000164546 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Chinese hamster chok1gshd MODERN SPECIES 83 Actr6 (ENSCGRG00001019259) Uhrf1bp1l (ENSCGRG00001015837) ENSCGRG00001007098 ENSCGRG00001012704 ENSCGRG00001010325 Apaf1 (ENSCGRG00001019923) Ikbip (ENSCGRG00001015426) Slc25a3 (ENSCGRG00001015631) Tmpo (ENSCGRG00001018759) Nedd1 (ENSCGRG00001019132) ENSCGRG00001014718 ENSCGRG00001019085 Cdk17 (ENSCGRG00001016887) Elk3 (ENSCGRG00001021882) Lta4h (ENSCGRG00001010777) Hal (ENSCGRG00001000150) #22 Amdhd1 (ENSCGRG00001023437) Ccdc38 (ENSCGRG00001020619) ENSCGRG00001017100 ENSCGRG00001010490 Ntn4 (ENSCGRG00001017544) Usp44 (ENSCGRG00001005555) METAP2 (ENSCGRG00001002959) Vezt (ENSCGRG00001016545) Fgd6 (ENSCGRG00001022120) Nr2c1 (ENSCGRG00001021503) Ndufa12 (ENSCGRG00001023632) Tmcc3 (ENSCGRG00001011362) Cep83 (ENSCGRG00001017799) Plxnc1 (ENSCGRG00001021705) Cradd (ENSCGRG00001005469) Golden Hamster MODERN SPECIES 628 ENSMAUG00000014661 Uhrf1bp1l (ENSMAUG00000013302) Anks1b (ENSMAUG00000010615) ENSMAUG00000007841 ENSMAUG00000022277 Slc25a3 (ENSMAUG00000017601) Tmpo (ENSMAUG00000014527) ENSMAUG00000015762 Nedd1 (ENSMAUG00000013081) ENSMAUG00000021431 ENSMAUG00000018845 Cdk17 (ENSMAUG00000017263) Elk3 (ENSMAUG00000009662) ENSMAUG00000008765 Lta4h (ENSMAUG00000001152) Hal (ENSMAUG00000018900) #22 Amdhd1 (ENSMAUG00000018875) Ccdc38 (ENSMAUG00000014067) ENSMAUG00000019737 Ntn4 (ENSMAUG00000004210) Usp44 (ENSMAUG00000000679) ENSMAUG00000014524 Vezt (ENSMAUG00000011049) Nr2c1 (ENSMAUG00000005656) ENSMAUG00000009984 Tmcc3 (ENSMAUG00000001274) Cep83 (ENSMAUG00000018689) Plxnc1 (ENSMAUG00000021960) Cradd (ENSMAUG00000022216) Socs2 (ENSMAUG00000011777) ENSMAUG00000018130 Cricetidae_B ANCESTRAL SPECIES 29 ENSGT00940000158037 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Prairie vole MODERN SPECIES 10 Nr1h4 (ENSMOCG00000006519) Slc17a8 (ENSMOCG00000009428) ENSMOCG00000016884 Actr6 (ENSMOCG00000020691) Uhrf1bp1l (ENSMOCG00000003118) Anks1b (ENSMOCG00000008363) Apaf1 (ENSMOCG00000015964) Ikbip (ENSMOCG00000003674) Slc25a3 (ENSMOCG00000011110) Tmpo (ENSMOCG00000003846) Nedd1 (ENSMOCG00000016729) Cfap54 (ENSMOCG00000015195) Cdk17 (ENSMOCG00000014292) Elk3 (ENSMOCG00000012020) Lta4h (ENSMOCG00000007811) Hal (ENSMOCG00000020920) #22 Amdhd1 (ENSMOCG00000013736) Ccdc38 (ENSMOCG00000000418) Snrpf (ENSMOCG00000020437) Ntn4 (ENSMOCG00000014630) Usp44 (ENSMOCG00000020189) ENSMOCG00000013555 ENSMOCG00000020971 Vezt (ENSMOCG00000000685) Fgd6 (ENSMOCG00000017458) Nr2c1 (ENSMOCG00000006925) Ndufa12 (ENSMOCG00000013678) Tmcc3 (ENSMOCG00000012369) Cep83 (ENSMOCG00000010672) Plxnc1 (ENSMOCG00000014781) Cradd (ENSMOCG00000000329) Northern American deer mouse MODERN SPECIES 9 Slc17a8 (ENSPEMG00000013525) ENSPEMG00000025459 Scyl2 (ENSPEMG00000015522) Actr6 (ENSPEMG00000007827) Uhrf1bp1l (ENSPEMG00000021207) Anks1b (ENSPEMG00000021142) Apaf1 (ENSPEMG00000013242) Ikbip (ENSPEMG00000003189) Slc25a3 (ENSPEMG00000007546) Tmpo (ENSPEMG00000013139) Nedd1 (ENSPEMG00000022166) Cfap54 (ENSPEMG00000022516) Cdk17 (ENSPEMG00000013082) Elk3 (ENSPEMG00000015910) Lta4h (ENSPEMG00000024211) Hal (ENSPEMG00000022890) #22 Amdhd1 (ENSPEMG00000022642) Ccdc38 (ENSPEMG00000021888) Snrpf (ENSPEMG00000023326) Ntn4 (ENSPEMG00000021404) Usp44 (ENSPEMG00000023988) Metap2 (ENSPEMG00000023518) Vezt (ENSPEMG00000024034) ENSPEMG00000027065 Fgd6 (ENSPEMG00000000975) Nr2c1 (ENSPEMG00000011087) Ndufa12 (ENSPEMG00000023653) Tmcc3 (ENSPEMG00000022879) Cep83 (ENSPEMG00000019426) Plxnc1 (ENSPEMG00000019499) ENSPEMG00000021950 Murinae ANCESTRAL SPECIES 22 ENSGT00940000158037 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Mus ANCESTRAL SPECIES 23 ENSGT00940000158037 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00860000135975 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Mus_A ANCESTRAL SPECIES 11 ENSGT00940000158037 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00860000135975 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Mus_B ANCESTRAL SPECIES 10 ENSGT00940000158037 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016.e ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00860000135975 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Mouse MODERN SPECIES 1 Nr1h4 (ENSMUSG00000047638) Slc17a8 (ENSMUSG00000019935) Scyl2 (ENSMUSG00000069539) Actr6 (ENSMUSG00000019948) Uhrf1bp1l (ENSMUSG00000019951) Anks1b (ENSMUSG00000058589) Apaf1 (ENSMUSG00000019979) Ikbip (ENSMUSG00000019975) Slc25a3 (ENSMUSG00000061904) Tmpo (ENSMUSG00000019961) Nedd1 (ENSMUSG00000019988) Cfap54 (ENSMUSG00000020014) Cdk17 (ENSMUSG00000020015) Elk3 (ENSMUSG00000008398) Lta4h (ENSMUSG00000015889) Hal (ENSMUSG00000020017) #22 Amdhd1 (ENSMUSG00000015890) Ccdc38 (ENSMUSG00000036168) Snrpf (ENSMUSG00000020018) Ntn4 (ENSMUSG00000020019) Usp44 (ENSMUSG00000020020) Metap2 (ENSMUSG00000036112) Vezt (ENSMUSG00000036099) Fgd6 (ENSMUSG00000020021) Nr2c1 (ENSMUSG00000005897) Ndufa12 (ENSMUSG00000020022) Tmcc3 (ENSMUSG00000020023) Cep83 (ENSMUSG00000020024) Plxnc1 (ENSMUSG00000074785) Cradd (ENSMUSG00000045867) Socs2 (ENSMUSG00000020027) Mus_C ANCESTRAL SPECIES 7 ENSGT00940000158037 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016.e ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00860000135975 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Steppe mouse MODERN SPECIES 3143 ENSMSIG00000005048 ENSMSIG00000005072 Nedd1 (ENSMSIG00000005076) Cfap54 (ENSMSIG00000005166) Cdk17 (ENSMSIG00000005927) ENSMSIG00000006048 Lta4h (ENSMSIG00000006122) Hal (ENSMSIG00000006208) #22 Amdhd1 (ENSMSIG00000006290) Ccdc38 (ENSMSIG00000006323) ENSMSIG00000006445 spretus MODERN SPECIES 1 Nr1h4 (MGP_SPRETEiJ_G0016535) Slc17a8 (MGP_SPRETEiJ_G0016536) Scyl2 (MGP_SPRETEiJ_G0016537) Actr6 (MGP_SPRETEiJ_G0016538) Uhrf1bp1l (MGP_SPRETEiJ_G0016539) Anks1b (MGP_SPRETEiJ_G0016540) Apaf1 (MGP_SPRETEiJ_G0016541) Ikbip (MGP_SPRETEiJ_G0016542) Slc25a3 (MGP_SPRETEiJ_G0016543) Tmpo (MGP_SPRETEiJ_G0016544) Nedd1 (MGP_SPRETEiJ_G0016545) Cfap54 (MGP_SPRETEiJ_G0016546) Cdk17 (MGP_SPRETEiJ_G0016547) Elk3 (MGP_SPRETEiJ_G0016548) Lta4h (MGP_SPRETEiJ_G0016549) Hal (MGP_SPRETEiJ_G0016550) #22 Amdhd1 (MGP_SPRETEiJ_G0016551) Ccdc38 (MGP_SPRETEiJ_G0016552) Snrpf (MGP_SPRETEiJ_G0016553) MGP_SPRETEiJ_G0016554 Ntn4 (MGP_SPRETEiJ_G0016555) Metap2 (MGP_SPRETEiJ_G0016556) MGP_SPRETEiJ_G0016557 Vezt (MGP_SPRETEiJ_G0016558) Fgd6 (MGP_SPRETEiJ_G0016559) Nr2c1 (MGP_SPRETEiJ_G0016560) Ndufa12 (MGP_SPRETEiJ_G0016561) MGP_SPRETEiJ_G0016562 Tmcc3 (MGP_SPRETEiJ_G0016563) Cep83 (MGP_SPRETEiJ_G0016564) Plxnc1 (MGP_SPRETEiJ_G0016565) Ryukyu mouse MODERN SPECIES 1 Nr1h4 (MGP_CAROLIEiJ_G0015717) Slc17a8 (MGP_CAROLIEiJ_G0015718) Scyl2 (MGP_CAROLIEiJ_G0015719) Actr6 (MGP_CAROLIEiJ_G0015720) Uhrf1bp1l (MGP_CAROLIEiJ_G0015721) Anks1b (MGP_CAROLIEiJ_G0015722) Apaf1 (MGP_CAROLIEiJ_G0015723) Ikbip (MGP_CAROLIEiJ_G0015724) Slc25a3 (MGP_CAROLIEiJ_G0015725) MGP_CAROLIEiJ_G0015726 Nedd1 (MGP_CAROLIEiJ_G0015727) Cfap54 (MGP_CAROLIEiJ_G0015728) Cdk17 (MGP_CAROLIEiJ_G0015729) Elk3 (MGP_CAROLIEiJ_G0015730) Lta4h (MGP_CAROLIEiJ_G0015731) Hal (MGP_CAROLIEiJ_G0015732) #22 Amdhd1 (MGP_CAROLIEiJ_G0015733) Ccdc38 (MGP_CAROLIEiJ_G0015734) Snrpf (MGP_CAROLIEiJ_G0015735) Ntn4 (MGP_CAROLIEiJ_G0015736) MGP_CAROLIEiJ_G0015737 Metap2 (MGP_CAROLIEiJ_G0015738) Vezt (MGP_CAROLIEiJ_G0015739) Fgd6 (MGP_CAROLIEiJ_G0015740) Nr2c1 (MGP_CAROLIEiJ_G0015741) Ndufa12 (MGP_CAROLIEiJ_G0015742) MGP_CAROLIEiJ_G0015743 Tmcc3 (MGP_CAROLIEiJ_G0015744) Cep83 (MGP_CAROLIEiJ_G0015745) Plxnc1 (MGP_CAROLIEiJ_G0015746) Cradd (MGP_CAROLIEiJ_G0015747) Shrew mouse MODERN SPECIES 22 Nr1h4 (MGP_PahariEiJ_G0031368) Slc17a8 (MGP_PahariEiJ_G0031367) Scyl2 (MGP_PahariEiJ_G0031366) Actr6 (MGP_PahariEiJ_G0031365) Uhrf1bp1l (MGP_PahariEiJ_G0031364) Anks1b (MGP_PahariEiJ_G0031363) Apaf1 (MGP_PahariEiJ_G0031362) Ikbip (MGP_PahariEiJ_G0031361) Slc25a3 (MGP_PahariEiJ_G0031360) Tmpo (MGP_PahariEiJ_G0031359) Nedd1 (MGP_PahariEiJ_G0031358) Cfap54 (MGP_PahariEiJ_G0031357) Cdk17 (MGP_PahariEiJ_G0031356) Elk3 (MGP_PahariEiJ_G0031355) Lta4h (MGP_PahariEiJ_G0031354) Hal (MGP_PahariEiJ_G0031353) #22 MGP_PahariEiJ_G0031352 Ccdc38 (MGP_PahariEiJ_G0031351) Snrpf (MGP_PahariEiJ_G0031350) MGP_PahariEiJ_G0031349 Ntn4 (MGP_PahariEiJ_G0031348) Metap2 (MGP_PahariEiJ_G0031347) Vezt (MGP_PahariEiJ_G0031346) Fgd6 (MGP_PahariEiJ_G0031345) Nr2c1 (MGP_PahariEiJ_G0031344) Ndufa12 (MGP_PahariEiJ_G0031343) MGP_PahariEiJ_G0031342 Tmcc3 (MGP_PahariEiJ_G0031341) Cep83 (MGP_PahariEiJ_G0031340) Plxnc1 (MGP_PahariEiJ_G0031339) Cradd (MGP_PahariEiJ_G0031338) Rat MODERN SPECIES 17 Scyl2 (ENSRNOG00000024955) Actr6 (ENSRNOG00000007875) ENSRNOG00000065049 Bltp3b (ENSRNOG00000050317) Anks1b (ENSRNOG00000024870) Apaf1 (ENSRNOG00000008022) Ikbip (ENSRNOG00000008247) Tmpo (ENSRNOG00000008797) ENSRNOG00000064198 AABR07056611.1 (ENSRNOG00000055726) Nedd1 (ENSRNOG00000004011) Cfap54 (ENSRNOG00000024494) Cdk17 (ENSRNOG00000004148) Elk3 (ENSRNOG00000004367) Lta4h (ENSRNOG00000004494) Hal (ENSRNOG00000004502) #22 Amdhd1 (ENSRNOG00000005266) Ccdc38 (ENSRNOG00000021892) Snrpf (ENSRNOG00000005556) Ntn4 (ENSRNOG00000005573) ENSRNOG00000068255 Usp44 (ENSRNOG00000005637) Metap2 (ENSRNOG00000021881) Vezt (ENSRNOG00000006514) Fgd6 (ENSRNOG00000054515) Nr2c1 (ENSRNOG00000006983) Ndufa12 (ENSRNOG00000007407) Tmcc3 (ENSRNOG00000007713) LOC100363642 (ENSRNOG00000007859) Plxnc1 (ENSRNOG00000007970) Cradd (ENSRNOG00000008507) Upper Galilee mountains blind mole rat MODERN SPECIES 773 ENSNGAG00000017983 Apaf1 (ENSNGAG00000019372) Ikbip (ENSNGAG00000024236) ENSNGAG00000022835 Tmpo (ENSNGAG00000022880) ENSNGAG00000013161 Nedd1 (ENSNGAG00000022549) ENSNGAG00000023461 ENSNGAG00000001754 Cdk17 (ENSNGAG00000015244) Elk3 (ENSNGAG00000023402) Lta4h (ENSNGAG00000015495) Hal (ENSNGAG00000010013) #22 Amdhd1 (ENSNGAG00000023195) Ccdc38 (ENSNGAG00000023191) Snrpf (ENSNGAG00000024292) Ntn4 (ENSNGAG00000018269) Usp44 (ENSNGAG00000014957) Metap2 (ENSNGAG00000009368) Vezt (ENSNGAG00000020631) Fgd6 (ENSNGAG00000023381) Nr2c1 (ENSNGAG00000023966) Ndufa12 (ENSNGAG00000002092) ENSNGAG00000013358 Tmcc3 (ENSNGAG00000023914) Cep83 (ENSNGAG00000011067) ENSNGAG00000004234 Lesser Egyptian jerboa MODERN SPECIES 42 ENSJJAG00000014007 Actr6 (ENSJJAG00000012412) Uhrf1bp1l (ENSJJAG00000023679) ENSJJAG00000018878 ENSJJAG00000023848 Apaf1 (ENSJJAG00000014169) ENSJJAG00000017372 Slc25a3 (ENSJJAG00000013339) Tmpo (ENSJJAG00000018127) Nedd1 (ENSJJAG00000010994) ENSJJAG00000017399 ENSJJAG00000014966 Cdk17 (ENSJJAG00000013291) Elk3 (ENSJJAG00000010853) Lta4h (ENSJJAG00000011318) Hal (ENSJJAG00000010741) #22 Amdhd1 (ENSJJAG00000010274) Ccdc38 (ENSJJAG00000013539) ENSJJAG00000011272 Ntn4 (ENSJJAG00000009845) ENSJJAG00000016408 Vezt (ENSJJAG00000023035) Fgd6 (ENSJJAG00000015874) Nr2c1 (ENSJJAG00000017174) Ndufa12 (ENSJJAG00000008129) ENSJJAG00000001738 Tmcc3 (ENSJJAG00000016753) Cep83 (ENSJJAG00000018283) ENSJJAG00000011221 Cradd (ENSJJAG00000019223) ENSJJAG00000011721 Rodentia_A ANCESTRAL SPECIES 4 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000164546 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Hystricomorpha ANCESTRAL SPECIES 9 ENSGT00940000158037 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983.e.a Hystricomorpha_a ANCESTRAL SPECIES 7 ENSGT00940000158037 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983.e.a Guinea pig MODERN SPECIES 9 SLC17A8 (ENSCPOG00000009083) SCYL2 (ENSCPOG00000015459) ACTR6 (ENSCPOG00000024022) BLTP3B (ENSCPOG00000009379) ANKS1B (ENSCPOG00000015197) APAF1 (ENSCPOG00000015196) IKBIP (ENSCPOG00000040634) SLC25A3 (ENSCPOG00000011606) TMPO (ENSCPOG00000011604) ENSCPOG00000004978 NEDD1 (ENSCPOG00000009631) CFAP54 (ENSCPOG00000009624) CDK17 (ENSCPOG00000005070) ELK3 (ENSCPOG00000005065) LTA4H (ENSCPOG00000013048) HAL (ENSCPOG00000013043) #22 AMDHD1 (ENSCPOG00000001031) CCDC38 (ENSCPOG00000013904) ENSCPOG00000013898 NTN4 (ENSCPOG00000013892) USP44 (ENSCPOG00000004072) METAP2 (ENSCPOG00000015510) VEZT (ENSCPOG00000009336) FGD6 (ENSCPOG00000012303) NR2C1 (ENSCPOG00000007507) NDUFA12 (ENSCPOG00000010154) ENSCPOG00000019272 TMCC3 (ENSCPOG00000034352) CEP83 (ENSCPOG00000008997) PLXNC1 (ENSCPOG00000008984) CRADD (ENSCPOG00000039871) Hystricomorpha_b ANCESTRAL SPECIES 13 ENSGT00940000158037 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983.e.a Degu MODERN SPECIES 45 ENSODEG00000010948 SLC25A3 (ENSODEG00000009995) ENSODEG00000013377 ENSODEG00000019648 ENSODEG00000019742 ENSODEG00000010263 ENSODEG00000012494 ENSODEG00000011590 NEDD1 (ENSODEG00000009573) ENSODEG00000014444 ENSODEG00000011350 ENSODEG00000013382 CDK17 (ENSODEG00000012390) ENSODEG00000012546 LTA4H (ENSODEG00000010622) HAL (ENSODEG00000008759) #22 AMDHD1 (ENSODEG00000009067) CCDC38 (ENSODEG00000010228) SNRPF (ENSODEG00000010328) NTN4 (ENSODEG00000009703) ENSODEG00000008729 VEZT (ENSODEG00000008709) ENSODEG00000019673 FGD6 (ENSODEG00000009828) NR2C1 (ENSODEG00000008809) ENSODEG00000010717 TMCC3 (ENSODEG00000009728) CEP83 (ENSODEG00000010822) ENSODEG00000008627 CRADD (ENSODEG00000010922) ENSODEG00000010298 Long-tailed chinchilla MODERN SPECIES 112 SCYL2 (ENSCLAG00000010496) ACTR6 (ENSCLAG00000007878) BLTP3B (ENSCLAG00000012501) ENSCLAG00000009179 ANKS1B (ENSCLAG00000009661) APAF1 (ENSCLAG00000009227) IKBIP (ENSCLAG00000008628) SLC25A3 (ENSCLAG00000007243) TMPO (ENSCLAG00000007244) ENSCLAG00000007083 NEDD1 (ENSCLAG00000013064) CFAP54 (ENSCLAG00000008151) CDK17 (ENSCLAG00000012821) ELK3 (ENSCLAG00000014957) Lta4h (ENSCLAG00000011828) HAL (ENSCLAG00000009969) #22 AMDHD1 (ENSCLAG00000010790) CCDC38 (ENSCLAG00000008219) ENSCLAG00000007200 NTN4 (ENSCLAG00000014781) USP44 (ENSCLAG00000010934) ENSCLAG00000009110 ENSCLAG00000018027 VEZT (ENSCLAG00000011358) FGD6 (ENSCLAG00000010121) NR2C1 (ENSCLAG00000007935) NDUFA12 (ENSCLAG00000004709) TMCC3 (ENSCLAG00000007987) CEP83 (ENSCLAG00000007562) PLXNC1 (ENSCLAG00000015691) CRADD (ENSCLAG00000015937) Naked mole-rat female MODERN SPECIES 8 APAF1 (ENSHGLG00000007198) ENSHGLG00000049820 IKBIP (ENSHGLG00000047603) ENSHGLG00000008601 ENSHGLG00000010848 ENSHGLG00000032527 ENSHGLG00000037736 NEDD1 (ENSHGLG00000012733) ENSHGLG00000011260 CFAP54 (ENSHGLG00000004618) ENSHGLG00000006066 ELK3 (ENSHGLG00000008439) ENSHGLG00000044737 LTA4H (ENSHGLG00000016903) AMDHD1 (ENSHGLG00000008602) HAL (ENSHGLG00000016192) #22 ENSHGLG00000008652 ENSHGLG00000045945 ENSHGLG00000009108 NTN4 (ENSHGLG00000004834) ENSHGLG00000005013 USP44 (ENSHGLG00000005081) ENSHGLG00000006135 ENSHGLG00000049874 ENSHGLG00000035762 ENSHGLG00000010396 FGD6 (ENSHGLG00000010509) NR2C1 (ENSHGLG00000012602) ENSHGLG00000016264 ENSHGLG00000016911 ENSHGLG00000049894 Sciuridae ANCESTRAL SPECIES 14 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000164546 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Marmotini ANCESTRAL SPECIES 4 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000164546 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Marmotini_b ANCESTRAL SPECIES 3 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Squirrel MODERN SPECIES 107 ENSSTOG00000015161 ENSSTOG00000033265 CDK17 (ENSSTOG00000010514) ELK3 (ENSSTOG00000010509) LTA4H (ENSSTOG00000010487) HAL (ENSSTOG00000010469) #22 AMDHD1 (ENSSTOG00000010460) CCDC38 (ENSSTOG00000010441) SNRPF (ENSSTOG00000010434) NTN4 (ENSSTOG00000002818) USP44 (ENSSTOG00000023944) METAP2 (ENSSTOG00000006960) VEZT (ENSSTOG00000016388) FGD6 (ENSSTOG00000016385) NR2C1 (ENSSTOG00000027488) TMCC3 (ENSSTOG00000015074) CEP83 (ENSSTOG00000000737) PLXNC1 (ENSSTOG00000000728) ENSSTOG00000021839 CRADD (ENSSTOG00000012496) SOCS2 (ENSSTOG00000012493) Arctic ground squirrel MODERN SPECIES 6 SCYL2 (ENSUPAG00010003458) ACTR6 (ENSUPAG00010003498) BLTP3B (ENSUPAG00010003512) ANKS1B (ENSUPAG00010003556) GARIN6 (ENSUPAG00010005992) APAF1 (ENSUPAG00010006002) IKBIP (ENSUPAG00010006055) SLC25A3 (ENSUPAG00010006073) ENSUPAG00010006109 NEDD1 (ENSUPAG00010006247) CFAP54 (ENSUPAG00010006280) CDK17 (ENSUPAG00010006388) ENSUPAG00010006422 ELK3 (ENSUPAG00010006425) LTA4H (ENSUPAG00010006436) HAL (ENSUPAG00010006474) #22 AMDHD1 (ENSUPAG00010006490) CCDC38 (ENSUPAG00010006493) SNRPF (ENSUPAG00010006506) NTN4 (ENSUPAG00010006514) USP44 (ENSUPAG00010006531) METAP2 (ENSUPAG00010006537) VEZT (ENSUPAG00010006572) FGD6 (ENSUPAG00010006610) NR2C1 (ENSUPAG00010006765) NDUFA12 (ENSUPAG00010006899) TMCC3 (ENSUPAG00010006912) CEP83 (ENSUPAG00010006959) PLXNC1 (ENSUPAG00010006977) CRADD (ENSUPAG00010007012) SOCS2 (ENSUPAG00010007030) Alpin marmot MODERN SPECIES 11 ACTR6 (ENSMMMG00000018236) BLTP3B (ENSMMMG00000018268) ANKS1B (ENSMMMG00000018366) GARIN6 (ENSMMMG00000019762) ENSMMMG00000019768 APAF1 (ENSMMMG00000019774) IKBIP (ENSMMMG00000019840) SLC25A3 (ENSMMMG00000019846) ENSMMMG00000019863 NEDD1 (ENSMMMG00000019953) ENSMMMG00000019958 ENSMMMG00000019968 CDK17 (ENSMMMG00000019989) ELK3 (ENSMMMG00000020001) LTA4H (ENSMMMG00000020008) HAL (ENSMMMG00000020025) #22 AMDHD1 (ENSMMMG00000020040) CCDC38 (ENSMMMG00000020049) SNRPF (ENSMMMG00000020063) NTN4 (ENSMMMG00000020068) USP44 (ENSMMMG00000020076) METAP2 (ENSMMMG00000020081) VEZT (ENSMMMG00000020109) FGD6 (ENSMMMG00000020186) NR2C1 (ENSMMMG00000020203) NDUFA12 (ENSMMMG00000020249) TMCC3 (ENSMMMG00000020256) ENSMMMG00000020271 CEP83 (ENSMMMG00000020275) PLXNC1 (ENSMMMG00000020295) CRADD (ENSMMMG00000020454) Eurasian red squirrel MODERN SPECIES 14 ENSSVLG00005008665 ENSSVLG00005008635 GARIN6 (ENSSVLG00005008609) ANKS1B (ENSSVLG00005007585) ENSSVLG00005007229 APAF1 (ENSSVLG00005006518) IKBIP (ENSSVLG00005006279) ENSSVLG00005006115 ENSSVLG00005006011 NEDD1 (ENSSVLG00005005868) ENSSVLG00005005829 ENSSVLG00005005778 ENSSVLG00005005745 ELK3 (ENSSVLG00005005685) LTA4H (ENSSVLG00005005473) HAL (ENSSVLG00005005221) #22 AMDHD1 (ENSSVLG00005005130) CCDC38 (ENSSVLG00005005068) ENSSVLG00005005028 NTN4 (ENSSVLG00005004981) ENSSVLG00005004949 METAP2 (ENSSVLG00005004789) VEZT (ENSSVLG00005004622) FGD6 (ENSSVLG00005004477) NR2C1 (ENSSVLG00005004388) NDUFA12 (ENSSVLG00005004329) ENSSVLG00005004303 TMCC3 (ENSSVLG00005004280) CEP83 (ENSSVLG00005004243) PLXNC1 (ENSSVLG00005004224) CRADD (ENSSVLG00005004194) Lagomorpha ANCESTRAL SPECIES 22 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000162770 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157983 ENSGT00390000010491 Rabbit MODERN SPECIES 15 ENSOCUG00000024669 ACTR6 (ENSOCUG00000000141) ENSOCUG00000017132 ENSOCUG00000032944 ENSOCUG00000011887 ANKS1B (ENSOCUG00000029510) APAF1 (ENSOCUG00000011860) IKBIP (ENSOCUG00000011854) SLC25A3 (ENSOCUG00000011847) ENSOCUG00000012692 NEDD1 (ENSOCUG00000010944) CFAP54 (ENSOCUG00000013917) CDK17 (ENSOCUG00000013583) ELK3 (ENSOCUG00000034370) LTA4H (ENSOCUG00000005535) HAL (ENSOCUG00000005528) #22 AMDHD1 (ENSOCUG00000005523) CCDC38 (ENSOCUG00000010931) SNRPF (ENSOCUG00000010925) ENSOCUG00000034444 NTN4 (ENSOCUG00000015665) USP44 (ENSOCUG00000004663) METAP2 (ENSOCUG00000004653) VEZT (ENSOCUG00000008792) ENSOCUG00000022191 FGD6 (ENSOCUG00000004665) NR2C1 (ENSOCUG00000004657) NDUFA12 (ENSOCUG00000033569) TMCC3 (ENSOCUG00000008619) CEP83 (ENSOCUG00000016919) ENSOCUG00000016904 Pika MODERN SPECIES 1629 LTA4H (ENSOPRG00000011741) HAL (ENSOPRG00000011694) #22 AMDHD1 (ENSOPRG00000011673) CCDC38 (ENSOPRG00000011648) ENSOPRG00000011643 Primates ANCESTRAL SPECIES 6 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00900000143786 ENSGT00390000014448 Strepsirrhini ANCESTRAL SPECIES 3 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Lemuriformes ANCESTRAL SPECIES 1 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848.s ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Lemuriformes_a ANCESTRAL SPECIES 47 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848.s ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Greater bamboo lemur MODERN SPECIES 701 ENSPSMG00000005722 NEDD1 (ENSPSMG00000005700) CFAP54 (ENSPSMG00000005679) CDK17 (ENSPSMG00000005630) ELK3 (ENSPSMG00000005591) LTA4H (ENSPSMG00000005537) HAL (ENSPSMG00000005476) #22 AMDHD1 (ENSPSMG00000005464) CCDC38 (ENSPSMG00000005461) SNRPF (ENSPSMG00000005454) NTN4 (ENSPSMG00000005415) USP44 (ENSPSMG00000005390) METAP2 (ENSPSMG00000005258) VEZT (ENSPSMG00000005126) Coquerels sifaka MODERN SPECIES 968 DEPDC4 (ENSPCOG00000000868) ENSPCOG00000002628 ENSPCOG00000002696 BLTP3B (ENSPCOG00000018808) ANKS1B (ENSPCOG00000020608) GARIN6 (ENSPCOG00000022737) APAF1 (ENSPCOG00000020485) IKBIP (ENSPCOG00000027241) SLC25A3 (ENSPCOG00000014902) ENSPCOG00000027549 NEDD1 (ENSPCOG00000022969) CFAP54 (ENSPCOG00000024189) CDK17 (ENSPCOG00000014977) ELK3 (ENSPCOG00000003335) LTA4H (ENSPCOG00000016371) HAL (ENSPCOG00000027988) #22 AMDHD1 (ENSPCOG00000010352) CCDC38 (ENSPCOG00000028122) SNRPF (ENSPCOG00000023833) NTN4 (ENSPCOG00000014067) ENSPCOG00000014079 METAP2 (ENSPCOG00000016978) ENSPCOG00000001316 VEZT (ENSPCOG00000019402) FGD6 (ENSPCOG00000020148) NR2C1 (ENSPCOG00000021750) NDUFA12 (ENSPCOG00000021872) TMCC3 (ENSPCOG00000015961) CEP83 (ENSPCOG00000019573) PLXNC1 (ENSPCOG00000027273) CRADD (ENSPCOG00000024617) Mouse lemur MODERN SPECIES 29 DEPDC4 (ENSMICG00000016407) ENSMICG00000016393 BLTP3B (ENSMICG00000010210) ANKS1B (ENSMICG00000003540) GARIN6 (ENSMICG00000030013) ENSMICG00000032726 ENSMICG00000003528 IKBIP (ENSMICG00000026540) SLC25A3 (ENSMICG00000045036) ENSMICG00000031893 NEDD1 (ENSMICG00000015320) CFAP54 (ENSMICG00000015286) CDK17 (ENSMICG00000005540) ELK3 (ENSMICG00000012211) LTA4H (ENSMICG00000012198) HAL (ENSMICG00000012174) #22 AMDHD1 (ENSMICG00000012168) CCDC38 (ENSMICG00000012156) ENSMICG00000012153 NTN4 (ENSMICG00000012141) USP44 (ENSMICG00000029998) ENSMICG00000012120 ENSMICG00000029007 VEZT (ENSMICG00000031583) FGD6 (ENSMICG00000005866) NR2C1 (ENSMICG00000005857) ENSMICG00000014848 ENSMICG00000032833 TMCC3 (ENSMICG00000038267) CEP83 (ENSMICG00000016681) PLXNC1 (ENSMICG00000016660) Bushbaby MODERN SPECIES 122 ANKS1B (ENSOGAG00000012239) GARIN6 (ENSOGAG00000006412) ENSOGAG00000025146 APAF1 (ENSOGAG00000012229) IKBIP (ENSOGAG00000012226) ENSOGAG00000028619 SLC25A3 (ENSOGAG00000012222) ENSOGAG00000012220 NEDD1 (ENSOGAG00000005824) ENSOGAG00000005823 ENSOGAG00000024990 ENSOGAG00000012022 CDK17 (ENSOGAG00000007484) ELK3 (ENSOGAG00000031899) LTA4H (ENSOGAG00000014336) HAL (ENSOGAG00000014330) #22 AMDHD1 (ENSOGAG00000014327) CCDC38 (ENSOGAG00000014323) ENSOGAG00000014320 ENSOGAG00000027793 NTN4 (ENSOGAG00000014317) USP44 (ENSOGAG00000008473) ENSOGAG00000008469 VEZT (ENSOGAG00000011835) FGD6 (ENSOGAG00000011825) NR2C1 (ENSOGAG00000011821) NDUFA12 (ENSOGAG00000010853) CEP83 (ENSOGAG00000006072) ENSOGAG00000029202 ENSOGAG00000006063 CRADD (ENSOGAG00000025620) Haplorrhini ANCESTRAL SPECIES 3 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00900000143786 ENSGT00390000014448 Simiiformes ANCESTRAL SPECIES 4 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00600000084428.b ENSGT00940000163320 ENSGT00910000147278 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT01050000244956.b.c.b ENSGT00940000167249 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b Catarrhini ANCESTRAL SPECIES 4 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00910000147278 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00940000153460.c.a.b ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT01000000215340 ENSGT00940000156334 ENSGT00390000007888.c.b.h ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b Hominoidea ANCESTRAL SPECIES 5 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00600000084428.b ENSGT00940000163320 ENSGT00910000147278 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00940000153460.c.a.b ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT01000000215340 ENSGT00940000156334 ENSGT00390000007888.c.b.h ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b Hominidae ANCESTRAL SPECIES 4 ENSGT00720000108833 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00940000153460.c.a.b ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00900000143786 ENSGT00390000014448 Homo/Pan/Gorilla group ANCESTRAL SPECIES 5 ENSGT00940000163320 ENSGT00910000147996 ENSGT00910000147278 ENSGT00950000183105.B.a.a.a.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00940000153460.c.a.b ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000164757 ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00900000143786 ENSGT00390000014448 Homo/Pan group ANCESTRAL SPECIES 6 ENSGT00940000163320 ENSGT00910000147996 ENSGT00910000147278 ENSGT00950000183105.B.a.a.a.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00940000153460.c.a.b ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00900000143786 ENSGT00390000014448 Pan ANCESTRAL SPECIES 4 ENSGT00910000147996 ENSGT00910000147278 ENSGT00950000183105.B.a.a.a.b ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00940000153460.c.a.b ENSGT00390000001561 ENSGT00940000162446 ENSGT01000000218754 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000164757 ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000007084.c.b.k.b ENSGT00390000003290 ENSGT01000000215340 ENSGT00390000007888.c.b.h ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A Bonobo MODERN SPECIES 3 ENSPPAG00000043599 ENSPPAG00000040779 ENSPPAG00000040891 ANKS1B (ENSPPAG00000026584) APAF1 (ENSPPAG00000031677) IKBIP (ENSPPAG00000003106) SLC25A3 (ENSPPAG00000029167) ENSPPAG00000031102 ENSPPAG00000040182 NEDD1 (ENSPPAG00000028158) CFAP54 (ENSPPAG00000042461) ENSPPAG00000021963 ENSPPAG00000043707 ELK3 (ENSPPAG00000043130) LTA4H (ENSPPAG00000010533) HAL (ENSPPAG00000004003) #22 AMDHD1 (ENSPPAG00000040940) ENSPPAG00000039329 CCDC38 (ENSPPAG00000028731) ENSPPAG00000003072 NTN4 (ENSPPAG00000029128) USP44 (ENSPPAG00000031623) METAP2 (ENSPPAG00000040044) ENSPPAG00000016591 ENSPPAG00000011544 ENSPPAG00000041961 VEZT (ENSPPAG00000032437) ENSPPAG00000019205 FGD6 (ENSPPAG00000041692) NR2C1 (ENSPPAG00000043732) NDUFA12 (ENSPPAG00000014970) Chimpanzee MODERN SPECIES 3 ENSPTRG00000043655 ENSPTRG00000046979 ENSPTRG00000044995 ANKS1B (ENSPTRG00000005336) APAF1 (ENSPTRG00000005335) ENSPTRG00000005334 SLC25A3 (ENSPTRG00000005333) TMPO (ENSPTRG00000005331) ENSPTRG00000039568 NEDD1 (ENSPTRG00000005329) CFAP54 (ENSPTRG00000005326) ENSPTRG00000046831 CDK17 (ENSPTRG00000005323) ELK3 (ENSPTRG00000005322) LTA4H (ENSPTRG00000005321) HAL (ENSPTRG00000005320) #22 AMDHD1 (ENSPTRG00000005319) CCDC38 (ENSPTRG00000005318) SNRPF (ENSPTRG00000005317) ENSPTRG00000049896 NTN4 (ENSPTRG00000005315) USP44 (ENSPTRG00000005314) METAP2 (ENSPTRG00000005313) ENSPTRG00000044514 ENSPTRG00000045308 VEZT (ENSPTRG00000005312) ENSPTRG00000043616 FGD6 (ENSPTRG00000005309) NR2C1 (ENSPTRG00000005307) NDUFA12 (ENSPTRG00000005306) TMCC3 (ENSPTRG00000005304) Human MODERN SPECIES 3 SCYL2 (ENSG00000136021) DEPDC4 (ENSG00000166153) ACTR6 (ENSG00000075089) BLTP3B (ENSG00000111647) GARIN6 (ENSG00000180219) ANKS1B (ENSG00000185046) APAF1 (ENSG00000120868) IKBIP (ENSG00000166130) SLC25A3 (ENSG00000075415) TMPO (ENSG00000120802) NEDD1 (ENSG00000139350) CFAP54 (ENSG00000188596) CDK17 (ENSG00000059758) ELK3 (ENSG00000111145) LTA4H (ENSG00000111144) HAL (ENSG00000084110) #22 AMDHD1 (ENSG00000139344) CCDC38 (ENSG00000165972) SNRPF (ENSG00000139343) NTN4 (ENSG00000074527) USP44 (ENSG00000136014) METAP2 (ENSG00000111142) VEZT (ENSG00000028203) FGD6 (ENSG00000180263) NR2C1 (ENSG00000120798) NDUFA12 (ENSG00000184752) TMCC3 (ENSG00000057704) CEP83 (ENSG00000173588) PLXNC1 (ENSG00000136040) CRADD (ENSG00000169372) SOCS2 (ENSG00000120833) Gorilla MODERN SPECIES 3 GARIN6 (ENSGGOG00000028296) ENSGGOG00000042686 ENSGGOG00000040544 ENSGGOG00000039927 ANKS1B (ENSGGOG00000008413) APAF1 (ENSGGOG00000008401) IKBIP (ENSGGOG00000008397) SLC25A3 (ENSGGOG00000015886) ENSGGOG00000003388 ENSGGOG00000039481 NEDD1 (ENSGGOG00000010743) CFAP54 (ENSGGOG00000008490) CDK17 (ENSGGOG00000001172) ELK3 (ENSGGOG00000009227) LTA4H (ENSGGOG00000006881) HAL (ENSGGOG00000006865) #22 AMDHD1 (ENSGGOG00000006854) CCDC38 (ENSGGOG00000008870) ENSGGOG00000001127 ENSGGOG00000003096 NTN4 (ENSGGOG00000013684) USP44 (ENSGGOG00000008702) METAP2 (ENSGGOG00000008696) ENSGGOG00000028193 ENSGGOG00000037312 VEZT (ENSGGOG00000001896) FGD6 (ENSGGOG00000012410) NR2C1 (ENSGGOG00000012884) NDUFA12 (ENSGGOG00000012880) TMCC3 (ENSGGOG00000007536) SUCLG2 (ENSGGOG00000038911) Orangutan MODERN SPECIES 3 ENSPPYG00000032292 ACTR6 (ENSPPYG00000004864) ENSPPYG00000033741 BLTP3B (ENSPPYG00000004863) ENSPPYG00000004862 ANKS1B (ENSPPYG00000004861) APAF1 (ENSPPYG00000004860) IKBIP (ENSPPYG00000040489) SLC25A3 (ENSPPYG00000004858) ENSPPYG00000004857 NEDD1 (ENSPPYG00000004856) CFAP54 (ENSPPYG00000004855) CDK17 (ENSPPYG00000004853) ELK3 (ENSPPYG00000004852) LTA4H (ENSPPYG00000004851) HAL (ENSPPYG00000004850) #22 AMDHD1 (ENSPPYG00000004849) CCDC38 (ENSPPYG00000004848) ENSPPYG00000004847 NTN4 (ENSPPYG00000004846) USP44 (ENSPPYG00000004845) METAP2 (ENSPPYG00000004844) VEZT (ENSPPYG00000004843) FGD6 (ENSPPYG00000004841) NR2C1 (ENSPPYG00000004840) NDUFA12 (ENSPPYG00000004839) TMCC3 (ENSPPYG00000004838) CEP83 (ENSPPYG00000004837) PLXNC1 (ENSPPYG00000004836) CRADD (ENSPPYG00000004835) SOCS2 (ENSPPYG00000004834) Gibbon MODERN SPECIES BLTP3B (ENSNLEG00000006138) ENSNLEG00000006082 GARIN6 (ENSNLEG00000031711) ENSNLEG00000034600 ENSNLEG00000036133 APAF1 (ENSNLEG00000006016) IKBIP (ENSNLEG00000006012) SLC25A3 (ENSNLEG00000005973) ENSNLEG00000027479 ENSNLEG00000005966 NEDD1 (ENSNLEG00000005930) CFAP54 (ENSNLEG00000005915) CDK17 (ENSNLEG00000005912) ELK3 (ENSNLEG00000005910) LTA4H (ENSNLEG00000005897) HAL (ENSNLEG00000005864) #22 AMDHD1 (ENSNLEG00000005854) CCDC38 (ENSNLEG00000005841) ENSNLEG00000005835 NTN4 (ENSNLEG00000005820) USP44 (ENSNLEG00000005816) METAP2 (ENSNLEG00000005813) VEZT (ENSNLEG00000005798) ENSNLEG00000032922 ENSNLEG00000032302 FGD6 (ENSNLEG00000005781) ENSNLEG00000032465 NR2C1 (ENSNLEG00000005775) NDUFA12 (ENSNLEG00000005766) TMCC3 (ENSNLEG00000005764) ENSNLEG00000005763 Cercopithecidae ANCESTRAL SPECIES 3 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00940000153460.c.a.b ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000164757 ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT01000000215340 ENSGT00940000156334 ENSGT00390000007888.c.b.h ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A Cercopithecinae ANCESTRAL SPECIES 7 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00940000153460.c.a.b ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT01000000215340 ENSGT00940000156334 ENSGT00390000007888.c.b.h ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b Cercopithecinae_a ANCESTRAL SPECIES 7 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00940000153460.c.a.b ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000164757 ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT01000000215340 ENSGT00940000156334 ENSGT00390000007888.c.b.h ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000167249 ENSGT00940000157275 ENSGT00940000154003.A Macaca ANCESTRAL SPECIES 6 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00940000153460.c.a.b ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000164757 ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT01000000215340 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000167249 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b Macaca_a ANCESTRAL SPECIES 6 ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.a.a.a.b.a.b ENSGT00600000084428.b ENSGT00940000163320 ENSGT00910000148587 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000017580.`b ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448.h ENSGT00940000157983 ENSGT00390000010491 Crab-eating macaque MODERN SPECIES 2 ENSMFAG00000062988 ANKS1B (ENSMFAG00000032660) APAF1 (ENSMFAG00000039197) IKBIP (ENSMFAG00000045834) ENSMFAG00000051788 SLC25A3 (ENSMFAG00000000145) ENSMFAG00000055805 ENSMFAG00000037885 ENSMFAG00000030299 ENSMFAG00000060983 NEDD1 (ENSMFAG00000002214) CFAP54 (ENSMFAG00000037916) CDK17 (ENSMFAG00000033127) ELK3 (ENSMFAG00000044277) LTA4H (ENSMFAG00000000948) HAL (ENSMFAG00000037303) #22 CCDC38 (ENSMFAG00000035780) AMDHD1 (ENSMFAG00000046264) NTN4 (ENSMFAG00000040537) USP44 (ENSMFAG00000002328) ENSMFAG00000059910 METAP2 (ENSMFAG00000039915) VEZT (ENSMFAG00000039266) ENSMFAG00000017855 FGD6 (ENSMFAG00000038155) NR2C1 (ENSMFAG00000035305) ENSMFAG00000056137 NDUFA12 (ENSMFAG00000037509) ENSMFAG00000048701 ENSMFAG00000051124 TMCC3 (ENSMFAG00000000142) Rhesus MODERN SPECIES 2 ENSMMUG00000062511 ANKS1B (ENSMMUG00000022406) APAF1 (ENSMMUG00000022404) IKBIP (ENSMMUG00000051674) SLC25A3 (ENSMMUG00000023036) TMPO (ENSMMUG00000023719) ENSMMUG00000063079 ENSMMUG00000001354 NEDD1 (ENSMMUG00000004093) CFAP54 (ENSMMUG00000019643) CDK17 (ENSMMUG00000015902) ELK3 (ENSMMUG00000018145) ENSMMUG00000050585 ENSMMUG00000053376 LTA4H (ENSMMUG00000009312) HAL (ENSMMUG00000009308) #22 CCDC38 (ENSMMUG00000009303) AMDHD1 (ENSMMUG00000009304) NTN4 (ENSMMUG00000000521) USP44 (ENSMMUG00000013812) METAP2 (ENSMMUG00000062006) VEZT (ENSMMUG00000018903) FGD6 (ENSMMUG00000018901) NR2C1 (ENSMMUG00000018898) ENSMMUG00000060793 NDUFA12 (ENSMMUG00000061502) ENSMMUG00000056553 TMCC3 (ENSMMUG00000018242) CEP83 (ENSMMUG00000018239) PLXNC1 (ENSMMUG00000018237) CRADD (ENSMMUG00000012670) Pig-tailed macaque MODERN SPECIES 588 ENSMNEG00000005850 POU3F4 (ENSMNEG00000024620) CYLC1 (ENSMNEG00000035819) RPS6KA6 (ENSMNEG00000028869) HDX (ENSMNEG00000034200) ENSMNEG00000038005 ENSMNEG00000029877 SATL1 (ENSMNEG00000039957) ENSMNEG00000034840 NEDD1 (ENSMNEG00000038563) CFAP54 (ENSMNEG00000029580) CDK17 (ENSMNEG00000028105) ELK3 (ENSMNEG00000040169) LTA4H (ENSMNEG00000033752) HAL (ENSMNEG00000030888) #22 AMDHD1 (ENSMNEG00000029405) CCDC38 (ENSMNEG00000028098) ENSMNEG00000030762 NTN4 (ENSMNEG00000044631) USP44 (ENSMNEG00000041661) METAP2 (ENSMNEG00000035522) VEZT (ENSMNEG00000035171) ENSMNEG00000039155 FGD6 (ENSMNEG00000041618) ENSMNEG00000041277 ENSMNEG00000026977 NR2C1 (ENSMNEG00000033767) NDUFA12 (ENSMNEG00000028732) ENSMNEG00000044010 TMCC3 (ENSMNEG00000042729) Cercopithecinae_b ANCESTRAL SPECIES 2 ENSGT00880000138031.j ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00940000153460.c.a.b ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000164757 ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT01000000215340 ENSGT00940000156334 ENSGT00390000007888.c.b.h ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000167249 ENSGT00940000157275 ENSGT00940000154003.A Olive baboon MODERN SPECIES 19 ENSPANG00000049329 GARIN6 (ENSPANG00000041130) ENSPANG00000047895 ANKS1B (ENSPANG00000008710) APAF1 (ENSPANG00000011409) IKBIP (ENSPANG00000009791) ENSPANG00000018018 ENSPANG00000019454 NEDD1 (ENSPANG00000023046) CFAP54 (ENSPANG00000035731) ENSPANG00000044719 ENSPANG00000050074 CDK17 (ENSPANG00000023604) ELK3 (ENSPANG00000017478) LTA4H (ENSPANG00000010987) HAL (ENSPANG00000023010) #22 AMDHD1 (ENSPANG00000049296) CCDC38 (ENSPANG00000020389) ENSPANG00000014632 NTN4 (ENSPANG00000012062) METAP2 (ENSPANG00000010988) ENSPANG00000040155 USP44 (ENSPANG00000012532) VEZT (ENSPANG00000008228) FGD6 (ENSPANG00000004927) NR2C1 (ENSPANG00000006162) ENSPANG00000022780 TMCC3 (ENSPANG00000006620) CEP83 (ENSPANG00000020390) PLXNC1 (ENSPANG00000019455) ENSPANG00000042478 Cercopithecinae_d ANCESTRAL SPECIES 5 ENSGT00880000138031.j ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00940000153460.c.a.b ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000164757 ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT01000000215340 ENSGT00940000156334 ENSGT00390000007888.c.b.h ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000167249 ENSGT00940000157275 ENSGT00910000147837 Sooty mangabey MODERN SPECIES 406 SCYL2 (ENSCATG00000028764) ACTR6 (ENSCATG00000035115) BLTP3B (ENSCATG00000035719) ANKS1B (ENSCATG00000034542) GARIN6 (ENSCATG00000039282) APAF1 (ENSCATG00000042930) IKBIP (ENSCATG00000039722) SLC25A3 (ENSCATG00000042696) ENSCATG00000037155 ENSCATG00000035402 NEDD1 (ENSCATG00000040561) CFAP54 (ENSCATG00000040097) CDK17 (ENSCATG00000008799) ELK3 (ENSCATG00000035761) LTA4H (ENSCATG00000043659) HAL (ENSCATG00000016653) #22 AMDHD1 (ENSCATG00000043814) CCDC38 (ENSCATG00000041407) ENSCATG00000003132 NTN4 (ENSCATG00000006259) ENSCATG00000044202 USP44 (ENSCATG00000035851) METAP2 (ENSCATG00000043908) VEZT (ENSCATG00000043374) ENSCATG00000041454 ENSCATG00000041076 FGD6 (ENSCATG00000008001) ENSCATG00000037021 NR2C1 (ENSCATG00000030438) NDUFA12 (ENSCATG00000002834) ENSCATG00000041283 Drill MODERN SPECIES 1041 ENSMLEG00000041233 CDK17 (ENSMLEG00000030636) ELK3 (ENSMLEG00000007554) LTA4H (ENSMLEG00000038868) HAL (ENSMLEG00000040754) #22 AMDHD1 (ENSMLEG00000031240) CCDC38 (ENSMLEG00000028422) ENSMLEG00000033558 NTN4 (ENSMLEG00000042039) USP44 (ENSMLEG00000027955) METAP2 (ENSMLEG00000043214) VEZT (ENSMLEG00000035447) ENSMLEG00000035372 FGD6 (ENSMLEG00000039235) ENSMLEG00000043313 NR2C1 (ENSMLEG00000035404) NDUFA12 (ENSMLEG00000040487) ENSMLEG00000007470 Vervet Monkey MODERN SPECIES 2 ENSCSAG00000003488 ENSCSAG00000003493 ENSCSAG00000003498 ENSCSAG00000003515 APAF1 (ENSCSAG00000003526) IKBIP (ENSCSAG00000003532) SLC25A3 (ENSCSAG00000003535) TMPO (ENSCSAG00000003541) ENSCSAG00000003543 NEDD1 (ENSCSAG00000003548) ENSCSAG00000003561 ENSCSAG00000003566 CDK17 (ENSCSAG00000003570) ELK3 (ENSCSAG00000003573) LTA4H (ENSCSAG00000003579) HAL (ENSCSAG00000003585) #22 AMDHD1 (ENSCSAG00000003588) CCDC38 (ENSCSAG00000003598) SNRPF (ENSCSAG00000003602) NTN4 (ENSCSAG00000003608) USP44 (ENSCSAG00000003612) METAP2 (ENSCSAG00000003623) VEZT (ENSCSAG00000003629) FGD6 (ENSCSAG00000003638) NR2C1 (ENSCSAG00000003648) NDUFA12 (ENSCSAG00000003652) TMCC3 (ENSCSAG00000003657) CEP83 (ENSCSAG00000003663) PLXNC1 (ENSCSAG00000003684) ENSCSAG00000003695 CRADD (ENSCSAG00000003700) Rhinopithecus ANCESTRAL SPECIES 88 ENSGT00940000163320 ENSGT00910000148587 ENSGT00910000147278 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00940000153460.c.a.b ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000164757 ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000153305.c.e.a ENSGT01000000215340 ENSGT00940000156334 ENSGT00390000007888.c.b.h ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b Golden snub-nosed monkey MODERN SPECIES 2463 NEDD1 (ENSRROG00000016098) CFAP54 (ENSRROG00000042356) CDK17 (ENSRROG00000033560) ELK3 (ENSRROG00000038274) LTA4H (ENSRROG00000039183) HAL (ENSRROG00000034444) #22 AMDHD1 (ENSRROG00000028961) CCDC38 (ENSRROG00000030321) ENSRROG00000031057 NTN4 (ENSRROG00000044785) USP44 (ENSRROG00000027135) METAP2 (ENSRROG00000030292) VEZT (ENSRROG00000043459) ENSRROG00000030401 ENSRROG00000028899 FGD6 (ENSRROG00000032405) ENSRROG00000002457 NR2C1 (ENSRROG00000045630) NDUFA12 (ENSRROG00000032480) ENSRROG00000030022 TMCC3 (ENSRROG00000043997) Black snub-nosed monkey MODERN SPECIES 2233 CDK17 (ENSRBIG00000042355) ELK3 (ENSRBIG00000038170) LTA4H (ENSRBIG00000041127) HAL (ENSRBIG00000038544) #22 AMDHD1 (ENSRBIG00000043027) CCDC38 (ENSRBIG00000044393) ENSRBIG00000028811 NTN4 (ENSRBIG00000039668) USP44 (ENSRBIG00000035735) METAP2 (ENSRBIG00000039415) VEZT (ENSRBIG00000043788) ENSRBIG00000035199 ENSRBIG00000036858 FGD6 (ENSRBIG00000036397) NR2C1 (ENSRBIG00000034289) NDUFA12 (ENSRBIG00000028224) ENSRBIG00000028945 Platyrrhini ANCESTRAL SPECIES 6 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00600000084428.b ENSGT00940000163320 ENSGT00910000147278 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708.p ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000153272.a.b.p.a ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016.u ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT01050000244956.b.c.b ENSGT00940000167249 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b Cebidae ANCESTRAL SPECIES 2 ENSGT00720000108833 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708.p ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000153272.a.b.p.a ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016.u ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00900000143786 ENSGT00390000014448 Cebidae_a ANCESTRAL SPECIES 8 ENSGT00720000108833 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00600000084428.b ENSGT00940000163320 ENSGT00940000154572.`c ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708.p ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000153272.a.b.p.a ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016.u ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT01050000244956.b.c.b ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00900000143786 Bolivian squirrel monkey MODERN SPECIES 76 ENSSBOG00000019564 BLTP3B (ENSSBOG00000024132) GARIN6 (ENSSBOG00000024096) ANKS1B (ENSSBOG00000032447) APAF1 (ENSSBOG00000031901) IKBIP (ENSSBOG00000030243) ENSSBOG00000035474 ENSSBOG00000022813 NEDD1 (ENSSBOG00000032018) CFAP54 (ENSSBOG00000024712) ENSSBOG00000027979 CDK17 (ENSSBOG00000023998) ELK3 (ENSSBOG00000033992) ENSSBOG00000034818 LTA4H (ENSSBOG00000032578) HAL (ENSSBOG00000035442) #22 AMDHD1 (ENSSBOG00000022637) ENSSBOG00000030506 CCDC38 (ENSSBOG00000035007) ENSSBOG00000036179 ENSSBOG00000035835 NTN4 (ENSSBOG00000028448) USP44 (ENSSBOG00000033632) METAP2 (ENSSBOG00000020444) VEZT (ENSSBOG00000025742) FGD6 (ENSSBOG00000023435) NR2C1 (ENSSBOG00000027345) ENSSBOG00000026305 ENSSBOG00000036052 TMCC3 (ENSSBOG00000021120) ENSSBOG00000023873 Capuchin MODERN SPECIES 18 APAF1 (ENSCCAG00000036130) IKBIP (ENSCCAG00000035750) ENSCCAG00000021600 ENSCCAG00000001210 ENSCCAG00000019847 ENSCCAG00000021602 ENSCCAG00000037273 NEDD1 (ENSCCAG00000021182) CFAP54 (ENSCCAG00000030981) ENSCCAG00000030942 CDK17 (ENSCCAG00000031013) ELK3 (ENSCCAG00000027140) ENSCCAG00000023776 ENSCCAG00000019612 LTA4H (ENSCCAG00000000096) HAL (ENSCCAG00000033366) #22 AMDHD1 (ENSCCAG00000029504) CCDC38 (ENSCCAG00000025127) SNRPF (ENSCCAG00000037378) ENSCCAG00000037291 NTN4 (ENSCCAG00000035065) USP44 (ENSCCAG00000026872) METAP2 (ENSCCAG00000030216) ENSCCAG00000012218 VEZT (ENSCCAG00000027894) FGD6 (ENSCCAG00000020917) NR2C1 (ENSCCAG00000030836) ENSCCAG00000023153 NDUFA12 (ENSCCAG00000033047) TMCC3 (ENSCCAG00000025628) CEP83 (ENSCCAG00000034012) Marmoset MODERN SPECIES 21 GARIN6 (ENSCJAG00000002335) ENSCJAG00000078320 ANKS1B (ENSCJAG00000002273) APAF1 (ENSCJAG00000002341) IKBIP (ENSCJAG00000002387) ENSCJAG00000002392 ENSCJAG00000002421 ENSCJAG00000074115 NEDD1 (ENSCJAG00000002430) CFAP54 (ENSCJAG00000002500) CDK17 (ENSCJAG00000002538) ENSCJAG00000076158 ELK3 (ENSCJAG00000002592) ENSCJAG00000071557 LTA4H (ENSCJAG00000002595) HAL (ENSCJAG00000002643) #22 AMDHD1 (ENSCJAG00000002672) CCDC38 (ENSCJAG00000002685) SNRPF (ENSCJAG00000002705) NTN4 (ENSCJAG00000002709) USP44 (ENSCJAG00000002734) METAP2 (ENSCJAG00000002740) VEZT (ENSCJAG00000002761) ENSCJAG00000085185 FGD6 (ENSCJAG00000002776) NDUFA12 (ENSCJAG00000046407) ENSCJAG00000078522 ENSCJAG00000067880 ENSCJAG00000072707 TMCC3 (ENSCJAG00000042544) ENSCJAG00000084562 Mas night monkey MODERN SPECIES 844 GARIN6 (ENSANAG00000031553) ENSANAG00000026705 APAF1 (ENSANAG00000025094) ENSANAG00000028428 IKBIP (ENSANAG00000029855) ENSANAG00000019441 ENSANAG00000031573 NEDD1 (ENSANAG00000023249) CFAP54 (ENSANAG00000033133) ENSANAG00000030628 ENSANAG00000036190 CDK17 (ENSANAG00000033442) ELK3 (ENSANAG00000036471) ENSANAG00000035612 LTA4H (ENSANAG00000019571) HAL (ENSANAG00000022286) #22 AMDHD1 (ENSANAG00000032343) CCDC38 (ENSANAG00000033763) SNRPF (ENSANAG00000032845) NTN4 (ENSANAG00000010727) ENSANAG00000035509 USP44 (ENSANAG00000033096) ENSANAG00000020324 VEZT (ENSANAG00000036147) ENSANAG00000035607 FGD6 (ENSANAG00000034114) NR2C1 (ENSANAG00000036288) NDUFA12 (ENSANAG00000036743) ENSANAG00000037797 ENSANAG00000036454 TMCC3 (ENSANAG00000035491) Tarsier MODERN SPECIES 2452 LTA4H (ENSTSYG00000014437) HAL (ENSTSYG00000034525) #22 AMDHD1 (ENSTSYG00000012879) Atlantogenata ANCESTRAL SPECIES 16 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000164546 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Xenarthra ANCESTRAL SPECIES 572 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 Armadillo MODERN SPECIES 845 LTA4H (ENSDNOG00000001969) HAL (ENSDNOG00000036337) #22 AMDHD1 (ENSDNOG00000033550) CCDC38 (ENSDNOG00000014987) SNRPF (ENSDNOG00000043775) NTN4 (ENSDNOG00000000488) USP44 (ENSDNOG00000036608) METAP2 (ENSDNOG00000009912) ENSDNOG00000048229 Sloth MODERN SPECIES 5370 LTA4H (ENSCHOG00000010705) HAL (ENSCHOG00000010647) #22 AMDHD1 (ENSCHOG00000010645) ENSCHOG00000010617 Afrotheria ANCESTRAL SPECIES 8 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000164546 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.a ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Afrotheria_a ANCESTRAL SPECIES 8 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a.d ENSGT00390000001561 ENSGT00940000164546 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Elephant MODERN SPECIES 196 ENSLAFG00000011615 ACTR6 (ENSLAFG00000001011) BLTP3B (ENSLAFG00000001375) ENSLAFG00000014660 ANKS1B (ENSLAFG00000014651) APAF1 (ENSLAFG00000014645) IKBIP (ENSLAFG00000014642) SLC25A3 (ENSLAFG00000002007) ENSLAFG00000014311 NEDD1 (ENSLAFG00000006312) ENSLAFG00000005062 ENSLAFG00000002765 CDK17 (ENSLAFG00000004270) ELK3 (ENSLAFG00000004269) LTA4H (ENSLAFG00000009821) HAL (ENSLAFG00000009816) #22 AMDHD1 (ENSLAFG00000009812) CCDC38 (ENSLAFG00000017433) ENSLAFG00000017426 NTN4 (ENSLAFG00000004124) USP44 (ENSLAFG00000009464) METAP2 (ENSLAFG00000009463) VEZT (ENSLAFG00000005868) FGD6 (ENSLAFG00000005863) NR2C1 (ENSLAFG00000005858) NDUFA12 (ENSLAFG00000030887) TMCC3 (ENSLAFG00000011565) CEP83 (ENSLAFG00000017800) PLXNC1 (ENSLAFG00000017782) CRADD (ENSLAFG00000017380) SOCS2 (ENSLAFG00000009745) Hyrax MODERN SPECIES 7594 LTA4H (ENSPCAG00000004177) HAL (ENSPCAG00000004058) #22 Tenrec MODERN SPECIES 1294 ENSETEG00000009321 #22 AMDHD1 (ENSETEG00000009317) Platypus MODERN SPECIES 5 SLC17A8 (ENSOANG00000005584) SCYL2 (ENSOANG00000005585) DEPDC4 (ENSOANG00000005587) ACTR6 (ENSOANG00000041905) BLTP3B (ENSOANG00000005589) ANKS1B (ENSOANG00000020004) APAF1 (ENSOANG00000005592) IKBIP (ENSOANG00000005593) SLC25A3 (ENSOANG00000005594) ENSOANG00000005595 NEDD1 (ENSOANG00000006600) CFAP54 (ENSOANG00000006601) CDK17 (ENSOANG00000006604) ELK3 (ENSOANG00000006606) LTA4H (ENSOANG00000006608) HAL (ENSOANG00000006609) #22 AMDHD1 (ENSOANG00000006610) ENSOANG00000006611 NTN4 (ENSOANG00000006613) USP44 (ENSOANG00000006614) METAP2 (ENSOANG00000003239) VEZT (ENSOANG00000006615) FGD6 (ENSOANG00000006616) NR2C1 (ENSOANG00000006617) ENSOANG00000006618 TMCC3 (ENSOANG00000006619) CEP83 (ENSOANG00000006620) PLXNC1 (ENSOANG00000006622) CRADD (ENSOANG00000044141) SOCS2 (ENSOANG00000038572) ENSOANG00000019984 Sauria ANCESTRAL SPECIES 4 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Archelosauria ANCESTRAL SPECIES 3 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Archosauria ANCESTRAL SPECIES 4 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000154818.a.a ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00940000153655.B ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A Aves ANCESTRAL SPECIES 1 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000154818.a.a ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00940000153655.B ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A Neognathae ANCESTRAL SPECIES 3 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00940000153655.B ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Neognathae_b ANCESTRAL SPECIES 2 ENSGT00940000158187 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Neognathae_c ANCESTRAL SPECIES ENSGT00940000158187 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Golden eagle MODERN SPECIES 18 SCYL2 (ENSACCG00020013065) DEPDC4 (ENSACCG00020013173) ACTR6 (ENSACCG00020013203) BLTP3B (ENSACCG00020013229) ENSACCG00020013250 ANKS1B (ENSACCG00020013285) APAF1 (ENSACCG00020013335) ENSACCG00020013382 SLC25A3 (ENSACCG00020013400) ENSACCG00020013470 NEDD1 (ENSACCG00020013535) ENSACCG00020013596 CDK17 (ENSACCG00020013655) ELK3 (ENSACCG00020013689) LTA4H (ENSACCG00020014249) HAL (ENSACCG00020014818) #22 AMDHD1 (ENSACCG00020014840) ENSACCG00020014858 NTN4 (ENSACCG00020014891) USP44 (ENSACCG00020014911) METAP2 (ENSACCG00020014933) VEZT (ENSACCG00020014952) FGD6 (ENSACCG00020015006) NR2C1 (ENSACCG00020015077) NDUFA12 (ENSACCG00020015116) TMCC3 (ENSACCG00020015134) CEP83 (ENSACCG00020015148) PLXNC1 (ENSACCG00020015195) CRADD (ENSACCG00020015241) SOCS2 (ENSACCG00020015259) MRPL42 (ENSACCG00020015277) Kakapo MODERN SPECIES 20 SCYL2 (ENSSHBG00005014083) DEPDC4 (ENSSHBG00005014022) ACTR6 (ENSSHBG00005013997) BLTP3B (ENSSHBG00005013937) ENSSHBG00005013920 ANKS1B (ENSSHBG00005013879) APAF1 (ENSSHBG00005011721) ENSSHBG00005011552 SLC25A3 (ENSSHBG00005011520) ENSSHBG00005011461 NEDD1 (ENSSHBG00005011402) ENSSHBG00005011363 CDK17 (ENSSHBG00005011290) ELK3 (ENSSHBG00005011236) LTA4H (ENSSHBG00005011211) HAL (ENSSHBG00005011156) #22 AMDHD1 (ENSSHBG00005011109) ENSSHBG00005011072 NTN4 (ENSSHBG00005011028) USP44 (ENSSHBG00005010992) METAP2 (ENSSHBG00005010946) VEZT (ENSSHBG00005010900) ENSSHBG00005010873 FGD6 (ENSSHBG00005010815) NR2C1 (ENSSHBG00005010700) NDUFA12 (ENSSHBG00005010548) TMCC3 (ENSSHBG00005010520) CEP83 (ENSSHBG00005010473) PLXNC1 (ENSSHBG00005010441) CRADD (ENSSHBG00005010417) SOCS2 (ENSSHBG00005010395) Passeriformes ANCESTRAL SPECIES 3 ENSGT00940000158187 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00940000164439 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Passeriformes_d ANCESTRAL SPECIES 3 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00940000164439 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Passeriformes_g ANCESTRAL SPECIES 4 ENSGT00940000158187 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00940000164439 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000154818.a.b ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Passeroidea ANCESTRAL SPECIES 3 ENSGT00940000158187 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00940000164439 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000154818.a.b ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Zebra finch MODERN SPECIES 11 SLC17A8 (ENSTGUG00000008937) SCYL2 (ENSTGUG00000008908) DEPDC4 (ENSTGUG00000008896) ACTR6 (ENSTGUG00000008877) BLTP3B (ENSTGUG00000008861) ANKS1B (ENSTGUG00000008843) APAF1 (ENSTGUG00000008761) IKBIP (ENSTGUG00000023025) SLC25A3 (ENSTGUG00000020418) ENSTGUG00000008719 ENSTGUG00000008696 CFAP54 (ENSTGUG00000008665) CDK17 (ENSTGUG00000008629) ELK3 (ENSTGUG00000008619) LTA4H (ENSTGUG00000008539) HAL (ENSTGUG00000008503) #22 AMDHD1 (ENSTGUG00000008491) SNRPF (ENSTGUG00000024961) NTN4 (ENSTGUG00000008466) USP44 (ENSTGUG00000024797) METAP2 (ENSTGUG00000008438) VEZT (ENSTGUG00000008420) FGD6 (ENSTGUG00000008398) NR2C1 (ENSTGUG00000008363) NDUFA12 (ENSTGUG00000022977) TMCC3 (ENSTGUG00000008330) CEP83 (ENSTGUG00000008314) PLXNC1 (ENSTGUG00000008290) CRADD (ENSTGUG00000022539) MRPL42 (ENSTGUG00000008272) UBE2N (ENSTGUG00000027866) Common canary MODERN SPECIES 6 DEPDC4 (ENSSCAG00000006924) ACTR6 (ENSSCAG00000006930) BLTP3B (ENSSCAG00000006936) ENSSCAG00000006950 ENSSCAG00000006954 ENSSCAG00000006967 APAF1 (ENSSCAG00000006979) IKBIP (ENSSCAG00000007000) SLC25A3 (ENSSCAG00000007005) ENSSCAG00000007014 ENSSCAG00000007029 ENSSCAG00000007043 CDK17 (ENSSCAG00000007054) ELK3 (ENSSCAG00000007062) LTA4H (ENSSCAG00000007065) HAL (ENSSCAG00000007068) #22 AMDHD1 (ENSSCAG00000007086) ENSSCAG00000007089 NTN4 (ENSSCAG00000007094) USP44 (ENSSCAG00000007129) METAP2 (ENSSCAG00000007139) VEZT (ENSSCAG00000007210) FGD6 (ENSSCAG00000007262) NR2C1 (ENSSCAG00000007270) NDUFA12 (ENSSCAG00000007282) TMCC3 (ENSSCAG00000007289) CEP83 (ENSSCAG00000007295) PLXNC1 (ENSSCAG00000007322) CRADD (ENSSCAG00000007382) SOCS2 (ENSSCAG00000007388) MRPL42 (ENSSCAG00000007396) Medium ground finch MODERN SPECIES 34 SLC17A8 (ENSGFOG00000003682) SCYL2 (ENSGFOG00000003619) DEPDC4 (ENSGFOG00000003594) ACTR6 (ENSGFOG00000003578) BLTP3B (ENSGFOG00000003544) ANKS1B (ENSGFOG00000003511) APAF1 (ENSGFOG00000003470) IKBIP (ENSGFOG00000003453) SLC25A3 (ENSGFOG00000003080) ENSGFOG00000003032 ENSGFOG00000003002 ENSGFOG00000002961 CDK17 (ENSGFOG00000002895) ELK3 (ENSGFOG00000002881) LTA4H (ENSGFOG00000002021) HAL (ENSGFOG00000001801) #22 AMDHD1 (ENSGFOG00000001741) ENSGFOG00000001723 NTN4 (ENSGFOG00000001708) USP44 (ENSGFOG00000001692) METAP2 (ENSGFOG00000001658) VEZT (ENSGFOG00000001628) FGD6 (ENSGFOG00000001482) NR2C1 (ENSGFOG00000001442) NDUFA12 (ENSGFOG00000001433) TMCC3 (ENSGFOG00000001427) CEP83 (ENSGFOG00000001406) PLXNC1 (ENSGFOG00000001179) CRADD (ENSGFOG00000001141) SOCS2 (ENSGFOG00000001136) MRPL42 (ENSGFOG00000001126) Flycatcher MODERN SPECIES 10 DEPDC4 (ENSFALG00000011024) ACTR6 (ENSFALG00000011019) BLTP3B (ENSFALG00000011011) ANKS1B (ENSFALG00000011002) APAF1 (ENSFALG00000010994) IKBIP (ENSFALG00000010992) SLC25A3 (ENSFALG00000026978) ENSFALG00000010958 ENSFALG00000010924 ENSFALG00000023041 ENSFALG00000027198 CDK17 (ENSFALG00000010898) ELK3 (ENSFALG00000010890) ENSFALG00000027964 ENSFALG00000010866 HAL (ENSFALG00000027973) #22 AMDHD1 (ENSFALG00000010808) ENSFALG00000028535 NTN4 (ENSFALG00000010793) USP44 (ENSFALG00000010789) METAP2 (ENSFALG00000027146) VEZT (ENSFALG00000010771) ENSFALG00000025900 FGD6 (ENSFALG00000010763) NR2C1 (ENSFALG00000010759) NDUFA12 (ENSFALG00000010757) TMCC3 (ENSFALG00000010752) CEP83 (ENSFALG00000010746) PLXNC1 (ENSFALG00000010728) CRADD (ENSFALG00000010722) SOCS2 (ENSFALG00000010719) Great tit MODERN SPECIES 10 SLC17A8 (ENSPMJG00000013223) SCYL2 (ENSPMJG00000013215) DEPDC4 (ENSPMJG00000013214) ACTR6 (ENSPMJG00000013213) BLTP3B (ENSPMJG00000013212) ANKS1B (ENSPMJG00000012949) APAF1 (ENSPMJG00000012940) IKBIP (ENSPMJG00000012939) SLC25A3 (ENSPMJG00000012937) ENSPMJG00000012936 ENSPMJG00000012926 CFAP54 (ENSPMJG00000012922) CDK17 (ENSPMJG00000012917) ELK3 (ENSPMJG00000012914) LTA4H (ENSPMJG00000012909) HAL (ENSPMJG00000012906) #22 AMDHD1 (ENSPMJG00000012902) SNRPF (ENSPMJG00000012901) NTN4 (ENSPMJG00000012900) USP44 (ENSPMJG00000012897) METAP2 (ENSPMJG00000012895) VEZT (ENSPMJG00000012890) ENSPMJG00000012889 FGD6 (ENSPMJG00000012888) NR2C1 (ENSPMJG00000012886) NDUFA12 (ENSPMJG00000012885) TMCC3 (ENSPMJG00000012883) CEP83 (ENSPMJG00000012882) PLXNC1 (ENSPMJG00000012861) CRADD (ENSPMJG00000012860) SOCS2 (ENSPMJG00000012859) Galloanserae ANCESTRAL SPECIES 3 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00940000153655.B ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Anatidae ANCESTRAL SPECIES 14 ENSGT00940000158037 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 ENSGT00390000010491 Pink-footed goose MODERN SPECIES 22 NR1H4 (ENSABRG00000013877) SLC17A8 (ENSABRG00000013851) SCYL2 (ENSABRG00000013839) ACTR6 (ENSABRG00000013827) BLTP3B (ENSABRG00000013819) ANKS1B (ENSABRG00000013567) APAF1 (ENSABRG00000012938) IKBIP (ENSABRG00000012876) SLC25A3 (ENSABRG00000012730) ENSABRG00000012704 NEDD1 (ENSABRG00000012646) CFAP54 (ENSABRG00000012499) CDK17 (ENSABRG00000012457) ELK3 (ENSABRG00000012443) LTA4H (ENSABRG00000012435) HAL (ENSABRG00000011632) #22 AMDHD1 (ENSABRG00000011591) SNRPF (ENSABRG00000011589) NTN4 (ENSABRG00000011580) USP44 (ENSABRG00000011571) METAP2 (ENSABRG00000011551) VEZT (ENSABRG00000011508) FGD6 (ENSABRG00000011430) NR2C1 (ENSABRG00000010879) NDUFA12 (ENSABRG00000010827) TMCC3 (ENSABRG00000010805) CEP83 (ENSABRG00000010782) PLXNC1 (ENSABRG00000010772) CRADD (ENSABRG00000010757) SOCS2 (ENSABRG00000010744) MRPL42 (ENSABRG00000010739) Duck MODERN SPECIES SLC17A8 (ENSAPLG00000012919) SCYL2 (ENSAPLG00000012666) ACTR6 (ENSAPLG00000012204) BLTP3B (ENSAPLG00000011479) ENSAPLG00000011425 ANKS1B (ENSAPLG00000011148) APAF1 (ENSAPLG00000010387) ENSAPLG00000010351 SLC25A3 (ENSAPLG00000020761) ENSAPLG00000010072 ENSAPLG00000016247 ENSAPLG00000002309 CDK17 (ENSAPLG00000002462) ELK3 (ENSAPLG00000002810) LTA4H (ENSAPLG00000002921) HAL (ENSAPLG00000003775) #22 AMDHD1 (ENSAPLG00000003873) ENSAPLG00000025869 NTN4 (ENSAPLG00000004278) USP44 (ENSAPLG00000004576) METAP2 (ENSAPLG00000004742) VEZT (ENSAPLG00000005408) FGD6 (ENSAPLG00000005867) NR2C1 (ENSAPLG00000006253) ENSAPLG00000015463 TMCC3 (ENSAPLG00000015453) CEP83 (ENSAPLG00000015313) PLXNC1 (ENSAPLG00000015114) CRADD (ENSAPLG00000015058) SOCS2 (ENSAPLG00000001565) MRPL42 (ENSAPLG00000015057) Phasianidae ANCESTRAL SPECIES ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00940000164439 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00940000153655.B ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00390000005708 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Phasianidae_b ANCESTRAL SPECIES 9 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00940000164439 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000154818.a.b ENSGT00940000154818.a.a ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00390000005708 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Chicken MODERN SPECIES SLC17A8 (ENSGALG00010011553) SCYL2 (ENSGALG00010011529) ACTR6 (ENSGALG00010011496) BLTP3B (ENSGALG00010011480) ENSGALG00010010629 ENSGALG00010014314 APAF1 (ENSGALG00010010618) IKBIP (ENSGALG00010010614) SLC25A3 (ENSGALG00010010588) TMPO (ENSGALG00010014294) NEDD1 (ENSGALG00010011979) CFAP54 (ENSGALG00010011960) CDK17 (ENSGALG00010011953) ELK3 (ENSGALG00010011929) LTA4H (ENSGALG00010011903) HAL (ENSGALG00010011891) #22 AMDHD1 (ENSGALG00010011876) SNRPF (ENSGALG00010011868) NTN4 (ENSGALG00010011859) USP44 (ENSGALG00010011819) METAP2 (ENSGALG00010011796) VEZT (ENSGALG00010011775) FGD6 (ENSGALG00010011738) NR2C1 (ENSGALG00010011653) NDUFA12 (ENSGALG00010009654) SNAPC3 (ENSGALG00010013558) TMCC3 (ENSGALG00010009769) CEP83 (ENSGALG00010010573) PLXNC1 (ENSGALG00010010512) CRADD (ENSGALG00010010466) SOCS2 (ENSGALG00010010431) Turkey MODERN SPECIES ACTR6 (ENSMGAG00000011643) BLTP3B (ENSMGAG00000011618) ENSMGAG00000011607 ENSMGAG00000023009 APAF1 (ENSMGAG00000011573) IKBIP (ENSMGAG00000011570) SLC25A3 (ENSMGAG00000011563) ENSMGAG00000011543 ENSMGAG00000011537 CFAP54 (ENSMGAG00000011526) ENSMGAG00000019626 ENSMGAG00000011518 CDK17 (ENSMGAG00000011506) ELK3 (ENSMGAG00000011496) LTA4H (ENSMGAG00000011484) HAL (ENSMGAG00000011460) #22 AMDHD1 (ENSMGAG00000011454) ENSMGAG00000011453 NTN4 (ENSMGAG00000011446) USP44 (ENSMGAG00000011439) METAP2 (ENSMGAG00000011429) ENSMGAG00000020794 FGD6 (ENSMGAG00000011399) NR2C1 (ENSMGAG00000011385) NDUFA12 (ENSMGAG00000021922) ENSMGAG00000011378 TMCC3 (ENSMGAG00000011372) CEP83 (ENSMGAG00000011364) PLXNC1 (ENSMGAG00000011352) CRADD (ENSMGAG00000011351) SOCS2 (ENSMGAG00000020134) Japanese quail MODERN SPECIES NR1H4 (ENSCJPG00005007383) SLC17A8 (ENSCJPG00005007381) SCYL2 (ENSCJPG00005007380) ACTR6 (ENSCJPG00005007379) BLTP3B (ENSCJPG00005007360) ANKS1B (ENSCJPG00005005999) APAF1 (ENSCJPG00005005109) ENSCJPG00005005104 SLC25A3 (ENSCJPG00005005099) ENSCJPG00005005094 ENSCJPG00005005055 CFAP54 (ENSCJPG00005005038) CDK17 (ENSCJPG00005005036) ELK3 (ENSCJPG00005005029) LTA4H (ENSCJPG00005005020) HAL (ENSCJPG00005005017) #22 AMDHD1 (ENSCJPG00005005008) SNRPF (ENSCJPG00005005007) NTN4 (ENSCJPG00005005005) USP44 (ENSCJPG00005005004) METAP2 (ENSCJPG00005005003) ENSCJPG00005004990 VEZT (ENSCJPG00005004986) FGD6 (ENSCJPG00005004979) NR2C1 (ENSCJPG00005004975) NDUFA12 (ENSCJPG00005004973) SNAPC3 (ENSCJPG00005004972) TMCC3 (ENSCJPG00005004968) CEP83 (ENSCJPG00005004959) PLXNC1 (ENSCJPG00005004958) CRADD (ENSCJPG00005004955) African ostrich MODERN SPECIES 589 ENSSCUG00000008391 APAF1 (ENSSCUG00000008395) ENSSCUG00000008405 SLC25A3 (ENSSCUG00000008409) ENSSCUG00000008413 NEDD1 (ENSSCUG00000008425) CFAP54 (ENSSCUG00000008441) CDK17 (ENSSCUG00000008483) ELK3 (ENSSCUG00000008486) LTA4H (ENSSCUG00000008489) HAL (ENSSCUG00000008498) #22 AMDHD1 (ENSSCUG00000008502) ENSSCUG00000008504 ENSSCUG00000008507 NTN4 (ENSSCUG00000008509) USP44 (ENSSCUG00000008513) METAP2 (ENSSCUG00000008515) VEZT (ENSSCUG00000008519) FGD6 (ENSSCUG00000008522) NR2C1 (ENSSCUG00000008527) NDUFA12 (ENSSCUG00000008530) TMCC3 (ENSSCUG00000008533) CEP83 (ENSSCUG00000008536) PLXNC1 (ENSSCUG00000008541) CRADD (ENSSCUG00000008545) ENSSCUG00000008547 Australian saltwater crocodile MODERN SPECIES 49 DEPDC4 (ENSCPRG00005019157) ACTR6 (ENSCPRG00005019155) BLTP3B (ENSCPRG00005019152) ENSCPRG00005019143 ENSCPRG00005019141 ENSCPRG00005019140 APAF1 (ENSCPRG00005019139) ENSCPRG00005019138 SLC25A3 (ENSCPRG00005019135) ENSCPRG00005019134 NEDD1 (ENSCPRG00005019125) ENSCPRG00005019121 ENSCPRG00005019119 CDK17 (ENSCPRG00005019118) ELK3 (ENSCPRG00005019116) HAL (ENSCPRG00005019112) #22 LTA4H (ENSCPRG00005019109) AMDHD1 (ENSCPRG00005019106) ENSCPRG00005019105 NTN4 (ENSCPRG00005019104) USP44 (ENSCPRG00005019103) METAP2 (ENSCPRG00005019100) ENSCPRG00005019099 VEZT (ENSCPRG00005019097) FGD6 (ENSCPRG00005019094) NR2C1 (ENSCPRG00005019090) NDUFA6 (ENSCPRG00005019089) SMDT1 (ENSCPRG00005019088) NAGA (ENSCPRG00005019086) WBP2NL (ENSCPRG00005019085) SEPTIN3 (ENSCPRG00005019084) Cryptodira ANCESTRAL SPECIES 11 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Testudinoidea ANCESTRAL SPECIES 4 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000164757 ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Emydidae ANCESTRAL SPECIES 55 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00990000205100.C ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT00940000162446 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000164757 ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 painted turtle DUPLICATION painted turtle MODERN SPECIES 2370 ACTR6 (ENSCPBG00000004488) BLTP3B (ENSCPBG00000004451) ENSCPBG00000004428 ANKS1B (ENSCPBG00000004377) APAF1 (ENSCPBG00000004307) IKBIP (ENSCPBG00000004281) SLC25A3 (ENSCPBG00000004261) ENSCPBG00000004210 ENSCPBG00000004178 ENSCPBG00000002444 NEDD1 (ENSCPBG00000002300) CFAP54 (ENSCPBG00000002200) CDK17 (ENSCPBG00000002155) ELK3 (ENSCPBG00000002127) LTA4H (ENSCPBG00000002061) ENSCPBG00000002031 #22 ENSCPBG00000002010 #22 AMDHD1 (ENSCPBG00000001992) CCDC38 (ENSCPBG00000001964) ENSCPBG00000001948 NTN4 (ENSCPBG00000001912) USP44 (ENSCPBG00000001893) METAP2 (ENSCPBG00000001885) VEZT (ENSCPBG00000001837) FGD6 (ENSCPBG00000001805) NR2C1 (ENSCPBG00000001773) NDUFA12 (ENSCPBG00000001751) TMCC3 (ENSCPBG00000001730) CEP83 (ENSCPBG00000001696) PLXNC1 (ENSCPBG00000001660) CRADD (ENSCPBG00000001607) painted turtle MODERN SPECIES 2370 BLTP3B (ENSCPBG00000004451) ENSCPBG00000004428 ANKS1B (ENSCPBG00000004377) APAF1 (ENSCPBG00000004307) IKBIP (ENSCPBG00000004281) SLC25A3 (ENSCPBG00000004261) ENSCPBG00000004210 ENSCPBG00000004178 ENSCPBG00000002444 NEDD1 (ENSCPBG00000002300) CFAP54 (ENSCPBG00000002200) CDK17 (ENSCPBG00000002155) ELK3 (ENSCPBG00000002127) LTA4H (ENSCPBG00000002061) ENSCPBG00000002031 #22 ENSCPBG00000002010 #22 AMDHD1 (ENSCPBG00000001992) CCDC38 (ENSCPBG00000001964) ENSCPBG00000001948 NTN4 (ENSCPBG00000001912) USP44 (ENSCPBG00000001893) METAP2 (ENSCPBG00000001885) VEZT (ENSCPBG00000001837) FGD6 (ENSCPBG00000001805) NR2C1 (ENSCPBG00000001773) NDUFA12 (ENSCPBG00000001751) TMCC3 (ENSCPBG00000001730) CEP83 (ENSCPBG00000001696) PLXNC1 (ENSCPBG00000001660) CRADD (ENSCPBG00000001607) SOCS2 (ENSCPBG00000001626) Three-toed box turtle MODERN SPECIES 28 BLTP3B (ENSTMTG00000005732) ENSTMTG00000005680 ENSTMTG00000005666 ENSTMTG00000005653 ENSTMTG00000005600 APAF1 (ENSTMTG00000005547) IKBIP (ENSTMTG00000005522) SLC25A3 (ENSTMTG00000005500) ENSTMTG00000005437 ENSTMTG00000005408 NEDD1 (ENSTMTG00000005395) ENSTMTG00000005381 CDK17 (ENSTMTG00000005354) ELK3 (ENSTMTG00000005341) LTA4H (ENSTMTG00000005313) HAL (ENSTMTG00000005278) #22 AMDHD1 (ENSTMTG00000005251) ENSTMTG00000005234 NTN4 (ENSTMTG00000005220) USP44 (ENSTMTG00000005199) METAP2 (ENSTMTG00000005172) VEZT (ENSTMTG00000005150) FGD6 (ENSTMTG00000005044) NR2C1 (ENSTMTG00000004996) NDUFA12 (ENSTMTG00000004981) TMCC3 (ENSTMTG00000004970) CEP83 (ENSTMTG00000004938) PLXNC1 (ENSTMTG00000004494) CRADD (ENSTMTG00000004433) SOCS2 (ENSTMTG00000004425) MRPL42 (ENSTMTG00000004417) Testudinidae ANCESTRAL SPECIES 12 ENSGT00880000138031 ENSGT00950000182976.a.a ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000164757 ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000173218 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES BLTP3B (ENSGEVG00005001029) ENSGEVG00005001096 ENSGEVG00005001112 ENSGEVG00005001121 ENSGEVG00005001152 APAF1 (ENSGEVG00005001184) IKBIP (ENSGEVG00005001222) SLC25A3 (ENSGEVG00005001235) ENSGEVG00005001274 NEDD1 (ENSGEVG00005001329) ENSGEVG00005001381 CDK17 (ENSGEVG00005001417) ELK3 (ENSGEVG00005001450) LTA4H (ENSGEVG00005001472) ENSGEVG00005001523 #22 ENSGEVG00005001542 #22 AMDHD1 (ENSGEVG00005001578) ENSGEVG00005001603 NTN4 (ENSGEVG00005001640) USP44 (ENSGEVG00005001678) METAP2 (ENSGEVG00005001696) VEZT (ENSGEVG00005001728) FGD6 (ENSGEVG00005001766) NR2C1 (ENSGEVG00005001823) NDUFA12 (ENSGEVG00005001858) TMCC3 (ENSGEVG00005001866) CEP83 (ENSGEVG00005001881) PLXNC1 (ENSGEVG00005002052) SOCS2 (ENSGEVG00005002359) MRPL42 (ENSGEVG00005002373) ENSGEVG00005002390 Goode s thornscrub tortoise MODERN SPECIES ACTR6 (ENSGEVG00005000969) BLTP3B (ENSGEVG00005001029) ENSGEVG00005001096 ENSGEVG00005001112 ENSGEVG00005001121 ENSGEVG00005001152 APAF1 (ENSGEVG00005001184) IKBIP (ENSGEVG00005001222) SLC25A3 (ENSGEVG00005001235) ENSGEVG00005001274 NEDD1 (ENSGEVG00005001329) ENSGEVG00005001381 CDK17 (ENSGEVG00005001417) ELK3 (ENSGEVG00005001450) LTA4H (ENSGEVG00005001472) ENSGEVG00005001523 #22 ENSGEVG00005001542 #22 AMDHD1 (ENSGEVG00005001578) ENSGEVG00005001603 NTN4 (ENSGEVG00005001640) USP44 (ENSGEVG00005001678) METAP2 (ENSGEVG00005001696) VEZT (ENSGEVG00005001728) FGD6 (ENSGEVG00005001766) NR2C1 (ENSGEVG00005001823) NDUFA12 (ENSGEVG00005001858) TMCC3 (ENSGEVG00005001866) CEP83 (ENSGEVG00005001881) PLXNC1 (ENSGEVG00005002052) SOCS2 (ENSGEVG00005002359) MRPL42 (ENSGEVG00005002373) Abingdon island giant tortoise MODERN SPECIES 1349 ENSCABG00000006483 ENSCABG00000006480 ENSCABG00000006478 APAF1 (ENSCABG00000004476) IKBIP (ENSCABG00000004405) SLC25A3 (ENSCABG00000004401) ENSCABG00000004397 NEDD1 (ENSCABG00000004378) ENSCABG00000004376 ENSCABG00000004367 ENSCABG00000004365 ENSCABG00000004364 ELK3 (ENSCABG00000004362) ENSCABG00000004360 LTA4H (ENSCABG00000004357) HAL (ENSCABG00000003997) #22 AMDHD1 (ENSCABG00000003988) Chinese turtle MODERN SPECIES 698 ENSPSIG00000011662 APH1A (ENSPSIG00000011669) ENSPSIG00000011675 ANKS1B (ENSPSIG00000011701) APAF1 (ENSPSIG00000011998) IKBIP (ENSPSIG00000012344) ENSPSIG00000001230 SLC25A3 (ENSPSIG00000012357) ENSPSIG00000012389 NEDD1 (ENSPSIG00000012665) ENSPSIG00000012992 ENSPSIG00000013290 CDK17 (ENSPSIG00000013304) ELK3 (ENSPSIG00000014168) LTA4H (ENSPSIG00000014721) HAL (ENSPSIG00000015361) #22 AMDHD1 (ENSPSIG00000015618) CCDC38 (ENSPSIG00000016281) ENSPSIG00000016462 NTN4 (ENSPSIG00000016477) USP44 (ENSPSIG00000016556) METAP2 (ENSPSIG00000016560) VEZT (ENSPSIG00000016564) FGD6 (ENSPSIG00000016928) NR2C1 (ENSPSIG00000017190) NDUFA12 (ENSPSIG00000017193) TMCC3 (ENSPSIG00000017203) CEP83 (ENSPSIG00000017297) PLXNC1 (ENSPSIG00000017377) Lepidosauria ANCESTRAL SPECIES 3 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000164439 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Episquamata ANCESTRAL SPECIES 3 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000164439 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Toxicofera ANCESTRAL SPECIES 7 ENSGT00940000158037 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00940000164439 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Elapidae ANCESTRAL SPECIES 6 ENSGT00940000158037 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00940000164439 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129.b ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Elapidae_a DUPLICATION Elapidae_a ANCESTRAL SPECIES 1 ENSGT00940000158037 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710.c ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00940000164439 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129.b ENSGT00940000156375 ENSGT00390000009047.b.jb #22 ENSGT00390000009047.b.kb #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000158037 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710.c ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00940000164439 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129.b ENSGT00940000156375 ENSGT00390000009047.b.jb #22 ENSGT00390000009047.b.kb #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 Eastern brown snake MODERN SPECIES SCYL2 (ENSPTXG00000002187) ACTR6 (ENSPTXG00000002188) BLTP3B (ENSPTXG00000002189) ENSPTXG00000002193 ENSPTXG00000002194 ENSPTXG00000002195 APAF1 (ENSPTXG00000002205) ENSPTXG00000002403 SLC25A3 (ENSPTXG00000002405) ENSPTXG00000002408 ENSPTXG00000002413 ENSPTXG00000002414 CDK17 (ENSPTXG00000002418) ELK3 (ENSPTXG00000002600) LTA4H (ENSPTXG00000002602) HAL (ENSPTXG00000002604) #22 AMDHD1 (ENSPTXG00000002605) CCDC38 (ENSPTXG00000002607) ENSPTXG00000002609 NTN4 (ENSPTXG00000002610) USP44 (ENSPTXG00000002611) METAP2 (ENSPTXG00000002612) VEZT (ENSPTXG00000002614) FGD6 (ENSPTXG00000002616) NR2C1 (ENSPTXG00000002618) NDUFA12 (ENSPTXG00000002622) TMCC3 (ENSPTXG00000002625) CEP83 (ENSPTXG00000002628) PLXNC1 (ENSPTXG00000001805) CRADD (ENSPTXG00000001806) SOCS2 (ENSPTXG00000001807) Blue-lipped sea krait MODERN SPECIES 8669 LTA4H (ENSLLTG00000011172) ENSLLTG00000010814 #22 Elapidae_a ANCESTRAL SPECIES 1 ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710.c ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00940000164439 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129.b ENSGT00940000156375 ENSGT00390000009047.b.jb #22 ENSGT00390000009047.b.kb #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000158187 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710.c ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00940000164439 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129.b ENSGT00940000156375 ENSGT00390000009047.b.jb #22 ENSGT00390000009047.b.kb #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 Mainland tiger snake MODERN SPECIES 6 ACTR6 (ENSNSUG00000017261) ENSNSUG00000017259 ENSNSUG00000017258 ENSNSUG00000017257 ENSNSUG00000017256 ENSNSUG00000017255 APAF1 (ENSNSUG00000017121) SLC25A3 (ENSNSUG00000017119) ENSNSUG00000017118 ENSNSUG00000017116 ENSNSUG00000017055 ENSNSUG00000017053 CDK17 (ENSNSUG00000017052) ELK3 (ENSNSUG00000017051) LTA4H (ENSNSUG00000017050) HAL (ENSNSUG00000017049) #22 AMDHD1 (ENSNSUG00000017048) CCDC38 (ENSNSUG00000017047) ENSNSUG00000017046 NTN4 (ENSNSUG00000017017) USP44 (ENSNSUG00000017011) METAP2 (ENSNSUG00000017009) VEZT (ENSNSUG00000016991) FGD6 (ENSNSUG00000016990) NR2C1 (ENSNSUG00000016826) NDUFA12 (ENSNSUG00000016825) TMCC3 (ENSNSUG00000016824) CEP83 (ENSNSUG00000016823) ENSNSUG00000016822 CRADD (ENSNSUG00000016821) SOCS2 (ENSNSUG00000016820) Blue-lipped sea krait MODERN SPECIES 5789 ENSLLTG00000007922 #22 AMDHD1 (ENSLLTG00000007898) Indian cobra MODERN SPECIES 6 BLTP3B (ENSNNAG00000007447) ENSNNAG00000007416 ENSNNAG00000007398 ENSNNAG00000007376 APAF1 (ENSNNAG00000005230) IKBIP (ENSNNAG00000005091) ENSNNAG00000005080 SLC25A3 (ENSNNAG00000005036) ENSNNAG00000004995 ENSNNAG00000004966 ENSNNAG00000004875 ENSNNAG00000004779 CDK17 (ENSNNAG00000004131) ELK3 (ENSNNAG00000004018) LTA4H (ENSNNAG00000003968) HAL (ENSNNAG00000003724) #22 AMDHD1 (ENSNNAG00000003558) SNRPF (ENSNNAG00000003534) NTN4 (ENSNNAG00000003521) USP44 (ENSNNAG00000003513) METAP2 (ENSNNAG00000003500) VEZT (ENSNNAG00000003481) FGD6 (ENSNNAG00000003376) NR2C1 (ENSNNAG00000003336) NDUFA12 (ENSNNAG00000003312) TMCC3 (ENSNNAG00000003294) CEP83 (ENSNNAG00000003265) ENSNNAG00000003260 CRADD (ENSNNAG00000003251) SOCS2 (ENSNNAG00000003247) MRPL42 (ENSNNAG00000003233) Lizard MODERN SPECIES 4 BLTP3B (ENSACAG00000012716) ENSACAG00000012813 ENSACAG00000012892 APAF1 (ENSACAG00000013012) IKBIP (ENSACAG00000013225) SLC25A3 (ENSACAG00000013232) ENSACAG00000013272 ENSACAG00000037609 ENSACAG00000028953 ENSACAG00000013337 ENSACAG00000013432 ENSACAG00000043446 CDK17 (ENSACAG00000013452) ELK3 (ENSACAG00000013618) LTA4H (ENSACAG00000013672) HAL (ENSACAG00000013885) #22 AMDHD1 (ENSACAG00000014029) ENSACAG00000040185 ENSACAG00000014073 NTN4 (ENSACAG00000014080) USP44 (ENSACAG00000014125) METAP2 (ENSACAG00000014159) ENSACAG00000036068 FGD6 (ENSACAG00000012933) NR2C1 (ENSACAG00000012771) NDUFA12 (ENSACAG00000012767) TMCC3 (ENSACAG00000012746) CEP83 (ENSACAG00000012654) PLXNC1 (ENSACAG00000012631) ENSACAG00000042422 CRADD (ENSACAG00000012629) Laterata ANCESTRAL SPECIES 6 ENSGT00880000138031 ENSGT00720000108833 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00500000045001 ENSGT00390000008708 ENSGT00940000154098.a ENSGT00390000001561 ENSGT00940000162446 ENSGT01030000235320 ENSGT00940000162970 ENSGT00940000155834 ENSGT00940000157129 ENSGT00940000156375 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000153110.B ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00390000014448 ENSGT00940000157983 ENSGT00940000165713 Common wall lizard MODERN SPECIES 1 SCYL2 (ENSPMRG00000011442) ACTR6 (ENSPMRG00000011434) BLTP3B (ENSPMRG00000011427) ANKS1B (ENSPMRG00000011403) APAF1 (ENSPMRG00000011359) IKBIP (ENSPMRG00000011348) SLC25A3 (ENSPMRG00000011324) ENSPMRG00000011315 NEDD1 (ENSPMRG00000011292) CFAP54 (ENSPMRG00000011254) ENSPMRG00000011242 ENSPMRG00000011233 CDK17 (ENSPMRG00000010799) ELK3 (ENSPMRG00000010715) LTA4H (ENSPMRG00000010705) HAL (ENSPMRG00000010680) #22 AMDHD1 (ENSPMRG00000010671) CCDC38 (ENSPMRG00000010660) NTN4 (ENSPMRG00000010653) USP44 (ENSPMRG00000010647) METAP2 (ENSPMRG00000010638) VEZT (ENSPMRG00000010628) FGD6 (ENSPMRG00000010610) NR2C1 (ENSPMRG00000010593) NDUFA12 (ENSPMRG00000010584) ENSPMRG00000010578 ENSPMRG00000010576 TMCC3 (ENSPMRG00000010571) CEP83 (ENSPMRG00000010479) PLXNC1 (ENSPMRG00000010427) CRADD (ENSPMRG00000010417) Argentine black and white tegu MODERN SPECIES 6 SLC17A8 (ENSSMRG00000013665) SCYL2 (ENSSMRG00000013663) ACTR6 (ENSSMRG00000013660) BLTP3B (ENSSMRG00000013657) ENSSMRG00000013656 ANKS1B (ENSSMRG00000013652) APAF1 (ENSSMRG00000011507) IKBIP (ENSSMRG00000011475) ENSSMRG00000011468 ENSSMRG00000011458 ENSSMRG00000011423 ENSSMRG00000011419 CDK17 (ENSSMRG00000011361) ELK3 (ENSSMRG00000011356) LTA4H (ENSSMRG00000011347) HAL (ENSSMRG00000011281) #22 AMDHD1 (ENSSMRG00000011278) NTN4 (ENSSMRG00000011261) USP44 (ENSSMRG00000011203) METAP2 (ENSSMRG00000011201) VEZT (ENSSMRG00000011198) FGD6 (ENSSMRG00000011192) NR2C1 (ENSSMRG00000011186) NDUFA12 (ENSSMRG00000011151) TMCC3 (ENSSMRG00000011148) CEP83 (ENSSMRG00000011143) PLXNC1 (ENSSMRG00000011138) ENSSMRG00000011074 CRADD (ENSSMRG00000011072) SOCS2 (ENSSMRG00000011073) ENSSMRG00000011071 tuatara MODERN SPECIES 283 LTA4H (ENSSPUG00000014463) HAL (ENSSPUG00000014497) #22 AMDHD1 (ENSSPUG00000014575) ENSSPUG00000014590 NTN4 (ENSSPUG00000014614) USP44 (ENSSPUG00000014726) METAP2 (ENSSPUG00000014735) VEZT (ENSSPUG00000014768) FGD6 (ENSSPUG00000014798) NR2C1 (ENSSPUG00000014843) NDUFA12 (ENSSPUG00000014857) TMCC3 (ENSSPUG00000014866) CEP83 (ENSSPUG00000014876) PLXNC1 (ENSSPUG00000014908) ENSSPUG00000014992 SOCS2 (ENSSPUG00000015005) ENSSPUG00000015009 Anura ANCESTRAL SPECIES 49 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000160401 ENSGT00940000157643 ENSGT00940000155240.A ENSGT01000000214687 ENSGT00940000165344 ENSGT01050000244940.b ENSGT00390000007890 ENSGT00390000013073 ENSGT00390000015797 ENSGT00390000009583 #31 ENSGT00950000182824.a.a.a #30 ENSGT00390000003526 ENSGT00390000009047.b #22 ENSGT00390000008645 ENSGT00940000154818.a.a ENSGT01070000255793 ENSGT00940000154818.a.b ENSGT00940000156615 ENSGT00940000160526 ENSGT00940000155016 ENSGT00940000153655.B ENSGT00390000003290 ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b Frog MODERN SPECIES 3 gns (ENSXETG00000007318) tbc1d30 (ENSXETG00000030378) wif1 (ENSXETG00000013842) lemd3 (ENSXETG00000013841) MSRB3 (ENSXETG00000034860) hmga2 (ENSXETG00000038155) llphp3 (ENSXETG00000038218) tmbim4 (ENSXETG00000003775) xpot (ENSXETG00000021668) n6amt1 (ENSXETG00000041236) rpl18a (ENSXETG00000021667) nxt2 (ENSXETG00000045647) kics2 (ENSXETG00000021666) #31 srgap1 (ENSXETG00000021663) #30 rxylt1 (ENSXETG00000021662) hal.2 (ENSXETG00000021645) #22 amdhd1 (ENSXETG00000021636) snrpf (ENSXETG00000036509) ntn4 (ENSXETG00000040224) usp44 (ENSXETG00000009237) metap2 (ENSXETG00000009238) fgd6 (ENSXETG00000009239) vezt (ENSXETG00000023853) ENSXETG00000038648 nr2c1 (ENSXETG00000023840) ndufa12 (ENSXETG00000023839) tmcc3 (ENSXETG00000023832) cep83 (ENSXETG00000023829) ENSXETG00000045738 ENSXETG00000036097 socs2 (ENSXETG00000042155) Leishan spiny toad MODERN SPECIES 6 GNS (ENSLLEG00000025039) TBC1D30 (ENSLLEG00000024811) ENSLLEG00000024771 WIF1 (ENSLLEG00000024398) LEMD3 (ENSLLEG00000024276) ENSLLEG00000024251 MSRB3 (ENSLLEG00000024156) ENSLLEG00000023994 ENSLLEG00000023943 TMBIM4 (ENSLLEG00000023825) XPOT (ENSLLEG00000022909) N6AMT1 (ENSLLEG00000022766) RPL18A (ENSLLEG00000022434) KICS2 (ENSLLEG00000022280) #31 SRGAP1 (ENSLLEG00000021269) #30 HAL (ENSLLEG00000020722) #22 AMDHD1 (ENSLLEG00000020620) ENSLLEG00000020428 ENSLLEG00000020286 NTN4 (ENSLLEG00000020038) USP44 (ENSLLEG00000019906) ENSLLEG00000019765 ENSLLEG00000019617 ENSLLEG00000019414 VEZT (ENSLLEG00000018951) FGD6 (ENSLLEG00000018746) NR2C1 (ENSLLEG00000018219) NDUFA12 (ENSLLEG00000018131) ENSLLEG00000018104 ENSLLEG00000018083 TMCC3 (ENSLLEG00000017981) Coelacanth DUPLICATION Coelacanth MODERN SPECIES 3390 ENSLACG00000000731 #22 HAL (ENSLACG00000002598) #22 amdhd1 (ENSLACG00000004361) Coelacanth MODERN SPECIES 3390 ENSLACG00000000731 #22 HAL (ENSLACG00000002598) #22 amdhd1 (ENSLACG00000004361) Gnathostomata DUPLICATION Euteleostomi ANCESTRAL SPECIES ENSGT00390000009047.a.a ##22 Gnathostomata ANCESTRAL SPECIES ENSGT00390000009047.a.b ##22 Elephant shark MODERN SPECIES 1722 ENSCMIG00000014873 ENSCMIG00000014874 ENSCMIG00000014875 ENSCMIG00000014876 ENSCMIG00000014882 ENSCMIG00000014884 ENSCMIG00000014886 ENSCMIG00000014887 ENSCMIG00000014888 ENSCMIG00000014889 ENSCMIG00000014891 cdk17 (ENSCMIG00000014914) elk3 (ENSCMIG00000015032) lta4h (ENSCMIG00000015039) hal (ENSCMIG00000015069) ##22 hal (ENSCMIG00000015088) ##22 amdhd1 (ENSCMIG00000015090) SNRPF (ENSCMIG00000015093) ntn4 (ENSCMIG00000015099) usp44 (ENSCMIG00000015106) metap2b (ENSCMIG00000015112) vezt (ENSCMIG00000015115) FGD6 (ENSCMIG00000015118) ENSCMIG00000015123 ENSCMIG00000015125