Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00390000015384	ENSGT00940000159491	ENSGT00390000015484	ENSGT00530000063860.a	ENSGT00480000043246	ENSGT00940000155437	ENSGT00950000183227	ENSGT01060000248588.a.c.a	ENSGT00940000158371	ENSGT00940000157891	ENSGT00940000154808.a.b	ENSGT00940000163511	ENSGT00940000159795	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
Glires	ANCESTRAL SPECIES	7	ENSGT00390000015384	ENSGT00940000159491	ENSGT00390000015484	ENSGT00530000063860.a	ENSGT00480000043246	ENSGT00940000155437	ENSGT00950000183227	ENSGT01060000248588.a.c.a	ENSGT00940000158371	ENSGT00940000157891	ENSGT00940000154808.a.b	ENSGT00940000163511	ENSGT00940000159795	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
Rodentia	ANCESTRAL SPECIES	7	ENSGT01030000234638.b.b.c.b	ENSGT00390000014003	ENSGT00390000015874	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00940000165378	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00940000154585.a	ENSGT01030000234638.b.b.c.b	ENSGT00390000014003	ENSGT00390000015874	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
Myomorpha	ANCESTRAL SPECIES	5	ENSGT00940000154585.a	ENSGT01030000234638.b.b.c.b	ENSGT00390000014003	ENSGT00390000015874	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
Muroidea	ANCESTRAL SPECIES	4	ENSGT00940000154585.a	ENSGT01030000234638.b.b.c.b	ENSGT00390000014003	ENSGT00390000015874	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	880											Apc (ENSNGAG00000012131) #17	ENSNGAG00000003440 #18	Reep5 (ENSNGAG00000023958) #19	Pkd2l2 (ENSNGAG00000002094) #20	Fam13b (ENSNGAG00000023901) #21	Wnt8a (ENSNGAG00000021451) #22	Nme5 (ENSNGAG00000020415) #23	Brd8 (ENSNGAG00000024351) #24	Kif20a (ENSNGAG00000023004) #25	Cdc23 (ENSNGAG00000018648) #26	ENSNGAG00000006143 #27	Gfra3 (ENSNGAG00000023176) #28	Cdc25c (ENSNGAG00000021447) #29	Fam53c (ENSNGAG00000012177) #30	Kdm3b (ENSNGAG00000016085) #31	Reep2 (ENSNGAG00000021948) #32	ENSNGAG00000013583 #33	Egr1 (ENSNGAG00000010752) #34	Etf1 (ENSNGAG00000006779) #35	Hspa9 (ENSNGAG00000022089) #36	Lrrtm2 (ENSNGAG00000016155) #37
Muroidea_A	ANCESTRAL SPECIES	18	ENSGT00390000002204	ENSGT00950000182882.A.b.b	ENSGT01040000240573	ENSGT00510000049102	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
Cricetidae	ANCESTRAL SPECIES	18	ENSGT00390000002204	ENSGT00950000182882.A.b.b	ENSGT01040000240573	ENSGT00510000049102	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00990000207063	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
Cricetidae_B	ANCESTRAL SPECIES	15	ENSGT00940000156884	ENSGT00390000002204	ENSGT00950000182882.A.b.b	ENSGT00510000049102	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00990000207063	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b
Northern American deer mouse	MODERN SPECIES	10	Ercc3 (ENSPEMG00000013733)	Bin1 (ENSPEMG00000010611)	Gypc (ENSPEMG00000027226)	Tslp (ENSPEMG00000015334)	Wdr36 (ENSPEMG00000017285)	Camk4 (ENSPEMG00000000372)	ENSPEMG00000029162	Stard4 (ENSPEMG00000016637)	Nrep (ENSPEMG00000028845)	Epb41l4a (ENSPEMG00000000017)	Apc (ENSPEMG00000029243) #17	ENSPEMG00000004412 #18	Reep5 (ENSPEMG00000024466) #19	Pkd2l2 (ENSPEMG00000016709) #20	Fam13b (ENSPEMG00000014861) #21	Wnt8a (ENSPEMG00000012500) #22	Nme5 (ENSPEMG00000010677) #23	ENSPEMG00000000101 #24	ENSPEMG00000009560 #24	Kif20a (ENSPEMG00000012784) #25	Cdc23 (ENSPEMG00000006321) #26	Gfra3 (ENSPEMG00000018882) #28	Cdc25c (ENSPEMG00000014037) #29	ENSPEMG00000029996	ENSPEMG00000001395	Fam53c (ENSPEMG00000025208) #30	Kdm3b (ENSPEMG00000011691) #31	Reep2 (ENSPEMG00000008127) #32	Egr1 (ENSPEMG00000027631) #34	Etf1 (ENSPEMG00000000151) #35	ENSPEMG00000031190
Prairie vole	MODERN SPECIES	5	Ercc3 (ENSMOCG00000021767)	Bin1 (ENSMOCG00000008636)	Gypc (ENSMOCG00000015840)	Tslp (ENSMOCG00000017905)	Wdr36 (ENSMOCG00000012782)	Camk4 (ENSMOCG00000021840)	ENSMOCG00000015991	Stard4 (ENSMOCG00000001156)	Nrep (ENSMOCG00000012364)	Epb41l4a (ENSMOCG00000017576)	Apc (ENSMOCG00000017500) #17	ENSMOCG00000006534 #18	Reep5 (ENSMOCG00000013531) #19	Pkd2l2 (ENSMOCG00000006804) #20	Fam13b (ENSMOCG00000005024) #21	Wnt8a (ENSMOCG00000010523) #22	Nme5 (ENSMOCG00000013909) #23	ENSMOCG00000000400 #24	ENSMOCG00000017164 #24	Kif20a (ENSMOCG00000018558) #25	Cdc23 (ENSMOCG00000022523) #26	Gfra3 (ENSMOCG00000021834) #28	Cdc25c (ENSMOCG00000007941) #29	Fam53c (ENSMOCG00000001361) #30	Kdm3b (ENSMOCG00000017070) #31	Reep2 (ENSMOCG00000007752) #32	Egr1 (ENSMOCG00000011721) #34	Etf1 (ENSMOCG00000016845) #35	Hspa9 (ENSMOCG00000021902) #36	ENSMOCG00000002367	Ctnna1 (ENSMOCG00000007319)
Cricetinae	ANCESTRAL SPECIES	14	ENSGT00390000002204	ENSGT00950000182882.A.b.b	ENSGT01040000240573	ENSGT00510000049102	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00990000207063	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
Chinese hamster chok1gshd	MODERN SPECIES	92	Tex51 (ENSCGRG00001013935)	Gypc (ENSCGRG00001018165)	ENSCGRG00001017223	Tslp (ENSCGRG00001021100)	Wdr36 (ENSCGRG00001012983)	Camk4 (ENSCGRG00001023370)	ENSCGRG00001009945	Stard4 (ENSCGRG00001014235)	Nrep (ENSCGRG00001015808)	Epb41l4a (ENSCGRG00001013614)	Apc (ENSCGRG00001022260) #17	Srp19 (ENSCGRG00001020510) #18	Reep5 (ENSCGRG00001011292) #19	Pkd2l2 (ENSCGRG00001019213) #20	ENSCGRG00001016546 #21	Wnt8a (ENSCGRG00001021858) #22	Nme5 (ENSCGRG00001024432) #23	ENSCGRG00001008955 #24	ENSCGRG00001019239 #24	Kif20a (ENSCGRG00001010312) #25	Cdc23 (ENSCGRG00001017515) #26	Gfra3 (ENSCGRG00001021330) #28	ENSCGRG00001012386 #29	Fam53c (ENSCGRG00001018135) #30	Kdm3b (ENSCGRG00001016750) #31	Reep2 (ENSCGRG00001014287) #32	Egr1 (ENSCGRG00001016318) #34	Etf1 (ENSCGRG00001007046) #35	ENSCGRG00001002939	Hspa9 (ENSCGRG00001017325) #36	Ctnna1 (ENSCGRG00001023395)
Golden Hamster	MODERN SPECIES	619	Map3k2 (ENSMAUG00000020127)	Ercc3 (ENSMAUG00000004515)	Bin1 (ENSMAUG00000015474)	Tex51 (ENSMAUG00000008841)	Gypc (ENSMAUG00000012793)	Tslp (ENSMAUG00000003635)	Wdr36 (ENSMAUG00000018806)	Camk4 (ENSMAUG00000020936)	Stard4 (ENSMAUG00000022153)	Nrep (ENSMAUG00000020695)	Epb41l4a (ENSMAUG00000011587)	ENSMAUG00000013549 #17	Reep5 (ENSMAUG00000017436) #19	Pkd2l2 (ENSMAUG00000019506) #20	Fam13b (ENSMAUG00000010840) #21	Wnt8a (ENSMAUG00000010195) #22	Nme5 (ENSMAUG00000015571) #23	Brd8 (ENSMAUG00000021442) #24	Kif20a (ENSMAUG00000014695) #25	Cdc23 (ENSMAUG00000020718) #26	Gfra3 (ENSMAUG00000021771) #28	ENSMAUG00000021699 #29	Fam53c (ENSMAUG00000018904) #30	Kdm3b (ENSMAUG00000018465) #31	Reep2 (ENSMAUG00000020768) #32	Egr1 (ENSMAUG00000007358) #34	Etf1 (ENSMAUG00000013832) #35	Hspa9 (ENSMAUG00000009169) #36	Lrrtm2 (ENSMAUG00000018781) #37	Ctnna1 (ENSMAUG00000020855)	Sil1 (ENSMAUG00000017543)
Murinae	ANCESTRAL SPECIES	17	ENSGT00390000002204	ENSGT00950000182882.A.b.b	ENSGT01040000240573	ENSGT00510000049102	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
Mus	ANCESTRAL SPECIES	19	ENSGT00950000182882.A.b.b	ENSGT01040000240573	ENSGT00510000049102	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00390000016521	ENSGT00860000135642	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
Mus_A	ANCESTRAL SPECIES	19	ENSGT00950000182882.A.b.b	ENSGT01040000240573	ENSGT00510000049102	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00390000016521	ENSGT00860000135642	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
Mus_B	ANCESTRAL SPECIES	19	ENSGT00950000182882.A.b.b	ENSGT01040000240573	ENSGT00510000049102	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00390000016521	ENSGT00860000135642	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT00940000160581 #37	ENSGT01030000234543.A.b
Mouse	MODERN SPECIES	9	Ercc3 (ENSMUSG00000024382)	Bin1 (ENSMUSG00000024381)	Tex51 (ENSMUSG00000109238)	Gypc (ENSMUSG00000090523)	Tslp (ENSMUSG00000024379)	Wdr36 (ENSMUSG00000038299)	Camk4 (ENSMUSG00000038128)	Stard4 (ENSMUSG00000024378)	Nrep (ENSMUSG00000042834)	Epb41l4a (ENSMUSG00000024376)	Apc (ENSMUSG00000005871) #17	Srp19 (ENSMUSG00000014504) #18	Reep5 (ENSMUSG00000005873) #19	Pkd2l2 (ENSMUSG00000014503) #20	Fam13b (ENSMUSG00000036501) #21	Wnt8a (ENSMUSG00000012282) #22	Nme5 (ENSMUSG00000035984) #23	Brd8dc (ENSMUSG00000049357) #24	Brd8 (ENSMUSG00000003778) #24	Kif20a (ENSMUSG00000003779) #25	Cdc23 (ENSMUSG00000024370) #26	Gfra3 (ENSMUSG00000024366) #28	Cdc25c (ENSMUSG00000044201) #29	Gm3550 (ENSMUSG00000078240)	Fam53c (ENSMUSG00000034300) #30	Kdm3b (ENSMUSG00000038773) #31	Reep2 (ENSMUSG00000038555) #32	Egr1 (ENSMUSG00000038418) #34	Etf1 (ENSMUSG00000024360) #35	Hspa9 (ENSMUSG00000024359) #36	Ctnna1 (ENSMUSG00000037815)
Mus_C	ANCESTRAL SPECIES	16	ENSGT00950000182882.A.b.b	ENSGT01040000240573	ENSGT00510000049102	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00390000016521	ENSGT00860000135642	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
spretus	MODERN SPECIES	9	Ercc3 (MGP_SPRETEiJ_G0022987)	Bin1 (MGP_SPRETEiJ_G0022988)	Gypc (MGP_SPRETEiJ_G0022989)	Tslp (MGP_SPRETEiJ_G0022990)	Wdr36 (MGP_SPRETEiJ_G0022991)	Camk4 (MGP_SPRETEiJ_G0022992)	Stard4 (MGP_SPRETEiJ_G0022993)	Nrep (MGP_SPRETEiJ_G0022994)	MGP_SPRETEiJ_G0022995	Epb41l4a (MGP_SPRETEiJ_G0022996)	Apc (MGP_SPRETEiJ_G0022997) #17	Srp19 (MGP_SPRETEiJ_G0022998) #18	Reep5 (MGP_SPRETEiJ_G0022999) #19	Pkd2l2 (MGP_SPRETEiJ_G0023000) #20	Fam13b (MGP_SPRETEiJ_G0023001) #21	Wnt8a (MGP_SPRETEiJ_G0023002) #22	Nme5 (MGP_SPRETEiJ_G0023003) #23	Brd8dc (MGP_SPRETEiJ_G0023004) #24	Brd8 (MGP_SPRETEiJ_G0023005) #24	Kif20a (MGP_SPRETEiJ_G0023006) #25	Cdc23 (MGP_SPRETEiJ_G0023007) #26	Gfra3 (MGP_SPRETEiJ_G0023008) #28	Cdc25c (MGP_SPRETEiJ_G0023009) #29	Fam53c (MGP_SPRETEiJ_G0023010) #30	Kdm3b (MGP_SPRETEiJ_G0023011) #31	Reep2 (MGP_SPRETEiJ_G0023012) #32	Egr1 (MGP_SPRETEiJ_G0023013) #34	Etf1 (MGP_SPRETEiJ_G0023014) #35	Hspa9 (MGP_SPRETEiJ_G0023015) #36	Ctnna1 (MGP_SPRETEiJ_G0023016)	Lrrtm2 (MGP_SPRETEiJ_G0023017) #37
Steppe mouse	MODERN SPECIES	2707											Apc (ENSMSIG00000003339) #17	ENSMSIG00000003530 #18	Reep5 (ENSMSIG00000003595) #19	Pkd2l2 (ENSMSIG00000003624) #20	Fam13b (ENSMSIG00000003726) #21	Wnt8a (ENSMSIG00000003918) #22	Nme5 (ENSMSIG00000003940) #23	ENSMSIG00000003982 #24	Kif20a (ENSMSIG00000005168) #25	Cdc23 (ENSMSIG00000005234) #26
Ryukyu mouse	MODERN SPECIES	9	Ercc3 (MGP_CAROLIEiJ_G0022075)	Bin1 (MGP_CAROLIEiJ_G0022076)	Gypc (MGP_CAROLIEiJ_G0022077)	Tslp (MGP_CAROLIEiJ_G0022078)	Wdr36 (MGP_CAROLIEiJ_G0022079)	Camk4 (MGP_CAROLIEiJ_G0022080)	Stard4 (MGP_CAROLIEiJ_G0022081)	Nrep (MGP_CAROLIEiJ_G0022082)	MGP_CAROLIEiJ_G0022083	Epb41l4a (MGP_CAROLIEiJ_G0022084)	Apc (MGP_CAROLIEiJ_G0022085) #17	Srp19 (MGP_CAROLIEiJ_G0022086) #18	Reep5 (MGP_CAROLIEiJ_G0022087) #19	Pkd2l2 (MGP_CAROLIEiJ_G0022088) #20	Fam13b (MGP_CAROLIEiJ_G0022089) #21	Wnt8a (MGP_CAROLIEiJ_G0022090) #22	Nme5 (MGP_CAROLIEiJ_G0022091) #23	Brd8dc (MGP_CAROLIEiJ_G0022092) #24	Brd8 (MGP_CAROLIEiJ_G0022093) #24	Kif20a (MGP_CAROLIEiJ_G0022094) #25	Cdc23 (MGP_CAROLIEiJ_G0022095) #26	Gfra3 (MGP_CAROLIEiJ_G0022096) #28	Cdc25c (MGP_CAROLIEiJ_G0022097) #29	Fam53c (MGP_CAROLIEiJ_G0022098) #30	Kdm3b (MGP_CAROLIEiJ_G0022099) #31	Reep2 (MGP_CAROLIEiJ_G0022100) #32	Egr1 (MGP_CAROLIEiJ_G0022101) #34	Etf1 (MGP_CAROLIEiJ_G0022102) #35	Hspa9 (MGP_CAROLIEiJ_G0022103) #36	Ctnna1 (MGP_CAROLIEiJ_G0022104)	Lrrtm2 (MGP_CAROLIEiJ_G0022105) #37
Shrew mouse	MODERN SPECIES	6	Ercc3 (MGP_PahariEiJ_G0018809)	Bin1 (MGP_PahariEiJ_G0018810)	Gypc (MGP_PahariEiJ_G0018811)	Tslp (MGP_PahariEiJ_G0018812)	Wdr36 (MGP_PahariEiJ_G0018813)	Camk4 (MGP_PahariEiJ_G0018814)	Stard4 (MGP_PahariEiJ_G0018815)	Nrep (MGP_PahariEiJ_G0018816)	MGP_PahariEiJ_G0018817	Epb41l4a (MGP_PahariEiJ_G0018818)	Apc (MGP_PahariEiJ_G0018819) #17	Srp19 (MGP_PahariEiJ_G0018820) #18	Reep5 (MGP_PahariEiJ_G0018821) #19	Pkd2l2 (MGP_PahariEiJ_G0018822) #20	Fam13b (MGP_PahariEiJ_G0018823) #21	Wnt8a (MGP_PahariEiJ_G0018824) #22	Nme5 (MGP_PahariEiJ_G0018825) #23	Brd8dc (MGP_PahariEiJ_G0018826) #24	Brd8 (MGP_PahariEiJ_G0018827) #24	Kif20a (MGP_PahariEiJ_G0018828) #25	Cdc23 (MGP_PahariEiJ_G0018829) #26	Gfra3 (MGP_PahariEiJ_G0018830) #28	MGP_PahariEiJ_G0018831 #29	Fam53c (MGP_PahariEiJ_G0018832) #30	Kdm3b (MGP_PahariEiJ_G0018833) #31	Reep2 (MGP_PahariEiJ_G0018834) #32	Egr1 (MGP_PahariEiJ_G0018835) #34	Etf1 (MGP_PahariEiJ_G0018836) #35	Hspa9 (MGP_PahariEiJ_G0018837) #36	Ctnna1 (MGP_PahariEiJ_G0018838)	Lrrtm2 (MGP_PahariEiJ_G0018839) #37
Rat	MODERN SPECIES	9	LOC498836 (ENSRNOG00000025687)	Rps27a-ps12 (ENSRNOG00000020492)	Tslp (ENSRNOG00000058856)	Wdr36 (ENSRNOG00000027355)	Camk4 (ENSRNOG00000020478)	Stard4 (ENSRNOG00000020468)	Nrep (ENSRNOG00000068914)	Epb41l4a (ENSRNOG00000026050)	Apc (ENSRNOG00000020423) #17	Srp19 (ENSRNOG00000020204) #18	ENSRNOG00000062486 #18	Reep5 (ENSRNOG00000020167) #19	Pkd2l2 (ENSRNOG00000025489) #20	AABR07031691.1 (ENSRNOG00000060281)	Fam13b (ENSRNOG00000020384) #21	Wnt8a (ENSRNOG00000020157) #22	Nme5 (ENSRNOG00000020118) #23	Brd8 (ENSRNOG00000020340) #24	Kif20a (ENSRNOG00000024428) #25	Cdc23 (ENSRNOG00000024241) #26	Gfra3 (ENSRNOG00000020309) #28	Cdc25c (ENSRNOG00000024008) #29	LOC100363294 (ENSRNOG00000052628)	Fam53c (ENSRNOG00000020261) #30	Kdm3b (ENSRNOG00000050200) #31	Reep2 (ENSRNOG00000049629) #32	Egr1 (ENSRNOG00000019422) #34	Etf1 (ENSRNOG00000019450) #35	Hspa9 (ENSRNOG00000019525) #36	Ctnna1 (ENSRNOG00000005796)	Lrrtm2 (ENSRNOG00000047085) #37
Lesser Egyptian jerboa	MODERN SPECIES	48	Man2a1 (ENSJJAG00000023949)	ENSJJAG00000015721	Wdr36 (ENSJJAG00000023683)	ENSJJAG00000017083	Camk4 (ENSJJAG00000013021)	ENSJJAG00000013928	Nrep (ENSJJAG00000011359)	ENSJJAG00000008600	Epb41l4a (ENSJJAG00000009671)	Apc (ENSJJAG00000023844) #17	Srp19 (ENSJJAG00000017185) #18	Reep5 (ENSJJAG00000015726) #19	ENSJJAG00000008915	Pkd2l2 (ENSJJAG00000024290) #20	Fam13b (ENSJJAG00000021707) #21	Wnt8a (ENSJJAG00000017785) #22	Nme5 (ENSJJAG00000014667) #23	ENSJJAG00000004711 #24	ENSJJAG00000014244 #24	Kif20a (ENSJJAG00000019995) #25	Cdc23 (ENSJJAG00000015005) #26	Gfra3 (ENSJJAG00000017825) #28	Cdc25c (ENSJJAG00000008198) #29	Fam53c (ENSJJAG00000001252) #30	Kdm3b (ENSJJAG00000017875) #31	Reep2 (ENSJJAG00000023773) #32	Egr1 (ENSJJAG00000014698) #34	Etf1 (ENSJJAG00000017795) #35	ENSJJAG00000011656 #36	Lrrtm2 (ENSJJAG00000003390) #37	Ctnna1 (ENSJJAG00000020154)
Kangaroo rat	MODERN SPECIES	369		Efna5 (ENSDORG00000026933)	Fer (ENSDORG00000011921)	Pja2 (ENSDORG00000010832)	Man2a1 (ENSDORG00000008313)	Slc25a46 (ENSDORG00000006049)	Wdr36 (ENSDORG00000005468)	ENSDORG00000024812	Stard4 (ENSDORG00000029494)	ENSDORG00000007364	ENSDORG00000027658	Apc (ENSDORG00000024768) #17	Reep5 (ENSDORG00000004706) #19	Pkd2l2 (ENSDORG00000016713) #20	Fam13b (ENSDORG00000016714) #21	Wnt8a (ENSDORG00000007283) #22	Nme5 (ENSDORG00000025595) #23	Brd8 (ENSDORG00000001446) #24	Kif20a (ENSDORG00000001461) #25	Cdc23 (ENSDORG00000015524) #26	Fam53c (ENSDORG00000029169) #30	Kdm3b (ENSDORG00000002168) #31	Reep2 (ENSDORG00000002171) #32	Egr1 (ENSDORG00000028264) #34	Etf1 (ENSDORG00000006134) #35	Hspa9 (ENSDORG00000014493) #36	Lrrtm2 (ENSDORG00000010016) #37	Ctnna1 (ENSDORG00000010013)	ENSDORG00000029662	Sil1 (ENSDORG00000006159)	ENSDORG00000003429
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT01030000234638.b.b.c.b	ENSGT00390000014003	ENSGT00390000015874	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00940000165378	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
Sciuridae	ANCESTRAL SPECIES	18	ENSGT01030000234638.b.b.c.b	ENSGT00390000014003	ENSGT00390000015874	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00940000165378	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	15	PJA2 (ENSSVLG00005017366)	MAN2A1 (ENSSVLG00005017087)	TMEM232 (ENSSVLG00005016906)	SLC25A46 (ENSSVLG00005016805)	WDR36 (ENSSVLG00005016463)	CAMK4 (ENSSVLG00005016357)	STARD4 (ENSSVLG00005016220)	NREP (ENSSVLG00005016166)	EPB41L4A (ENSSVLG00005016111)	APC (ENSSVLG00005015946) #17	SRP19 (ENSSVLG00005015661) #18	REEP5 (ENSSVLG00005015543) #19	PKD2L2 (ENSSVLG00005015241) #20	FAM13B (ENSSVLG00005015131) #21	ENSSVLG00005015072	ENSSVLG00005014979 #22	NME5 (ENSSVLG00005014896) #23	BRD8 (ENSSVLG00005014749) #24	KIF20A (ENSSVLG00005014641) #25	CDC23 (ENSSVLG00005014550) #26	GFRA3 (ENSSVLG00005014475) #28	CDC25C (ENSSVLG00005014038) #29	ENSSVLG00005013761	FAM53C (ENSSVLG00005013633) #30	KDM3B (ENSSVLG00005013528) #31	REEP2 (ENSSVLG00005013139) #32	EGR1 (ENSSVLG00005013033) #34	ENSSVLG00005012813 #35	ENSSVLG00005012588 #36	ENSSVLG00005012517	ENSSVLG00005012481 #37
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005014498	ENSSVLG00005014481	INTS4 (ENSSVLG00005014058)	AAMDC (ENSSVLG00005013937)	RSF1 (ENSSVLG00005013858)	CLNS1A (ENSSVLG00005013729)	AQP11 (ENSSVLG00005013502)	PAK1 (ENSSVLG00005013431)	ENSSVLG00005013294	GDPD4 (ENSSVLG00005013184)	MYO7A (ENSSVLG00005012423)	CAPN5 (ENSSVLG00005012247)	B3GNT6 (ENSSVLG00005012209)	ACER3 (ENSSVLG00005023904)	TSKU (ENSSVLG00005023871)	ENSSVLG00005023846 #22	ENSSVLG00005023498	LRRC32 (ENSSVLG00005023371)	EMSY (ENSSVLG00005023093)	GVQW3 (ENSSVLG00005022970)	THAP12 (ENSSVLG00005022917)	WNT11 (ENSSVLG00005022863)	UVRAG (ENSSVLG00005022785)	DGAT2 (ENSSVLG00005022688)	MOGAT2 (ENSSVLG00005022595)	MAP6 (ENSSVLG00005022557)	SERPINH1 (ENSSVLG00005022497)	GDPD5 (ENSSVLG00005022336)	KLHL35 (ENSSVLG00005022223)	ENSSVLG00005022121	ENSSVLG00005021867
Marmotini	ANCESTRAL SPECIES	23	ENSGT01030000234638.b.b.c.b	ENSGT00390000014003	ENSGT00390000015874	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00940000165378	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
Marmotini_b	ANCESTRAL SPECIES	16	ENSGT01030000234638.b.b.c.b	ENSGT00390000014003	ENSGT00390000015874	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00940000165378	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37
Arctic ground squirrel	MODERN SPECIES	241									EPB41L4A (ENSUPAG00010021876)	APC (ENSUPAG00010021893) #17	SRP19 (ENSUPAG00010021920) #18	ENSUPAG00010021923	REEP5 (ENSUPAG00010021926) #19	PKD2L2 (ENSUPAG00010021930) #20	FAM13B (ENSUPAG00010021934) #21	WNT8A (ENSUPAG00010021939) #22	NME5 (ENSUPAG00010021941) #23	ENSUPAG00010021946	ENSUPAG00010021949 #24	BRD8 (ENSUPAG00010021951) #24	KIF20A (ENSUPAG00010021970) #25	CDC23 (ENSUPAG00010021979) #26	ENSUPAG00010021987	GFRA3 (ENSUPAG00010021988) #28	CDC25C (ENSUPAG00010021991) #29	ENSUPAG00010021998	FAM53C (ENSUPAG00010022019) #30	KDM3B (ENSUPAG00010022021) #31	EGR1 (ENSUPAG00010022030) #34	ETF1 (ENSUPAG00010022032) #35	HSPA9 (ENSUPAG00010022035) #36
Squirrel	MODERN SPECIES	131	PJA2 (ENSSTOG00000011977)	MAN2A1 (ENSSTOG00000011382)	SLC25A46 (ENSSTOG00000028091)	WDR36 (ENSSTOG00000014672)	CAMK4 (ENSSTOG00000004501)	STARD4 (ENSSTOG00000004522)	NREP (ENSSTOG00000029498)	ENSSTOG00000033722	EPB41L4A (ENSSTOG00000025672)	APC (ENSSTOG00000021603) #17	SRP19 (ENSSTOG00000000348) #18	REEP5 (ENSSTOG00000028638) #19	PKD2L2 (ENSSTOG00000006512) #20	FAM13B (ENSSTOG00000006534) #21	ENSSTOG00000033007	WNT8A (ENSSTOG00000007249) #22	NME5 (ENSSTOG00000007272) #23	ENSSTOG00000032460 #24	ENSSTOG00000007286 #24	KIF20A (ENSSTOG00000007341) #25	CDC23 (ENSSTOG00000007387) #26	GFRA3 (ENSSTOG00000008653) #28	CDC25C (ENSSTOG00000008667) #29	FAM53C (ENSSTOG00000008700) #30	KDM3B (ENSSTOG00000008711) #31	REEP2 (ENSSTOG00000008751) #32	EGR1 (ENSSTOG00000028129) #34	ETF1 (ENSSTOG00000025996) #35	HSPA9 (ENSSTOG00000008769) #36	CTNNA1 (ENSSTOG00000001036)	LRRTM2 (ENSSTOG00000001043) #37
Alpin marmot	MODERN SPECIES		ENSMMMG00000008614	MAN2A1 (ENSMMMG00000008653)	TMEM232 (ENSMMMG00000008697)	SLC25A46 (ENSMMMG00000008723)	ENSMMMG00000008765	WDR36 (ENSMMMG00000008773)	CAMK4 (ENSMMMG00000008822)	ENSMMMG00000008842	ENSMMMG00000008847	EPB41L4A (ENSMMMG00000008867)	APC (ENSMMMG00000008923) #17	SRP19 (ENSMMMG00000008991) #18	REEP5 (ENSMMMG00000009004) #19	PKD2L2 (ENSMMMG00000009035) #20	FAM13B (ENSMMMG00000009097) #21	WNT8A (ENSMMMG00000009126) #22	NME5 (ENSMMMG00000009141) #23	ENSMMMG00000009159	ENSMMMG00000009165 #24	ENSMMMG00000009180 #24	KIF20A (ENSMMMG00000009329) #25	CDC23 (ENSMMMG00000009376) #26	GFRA3 (ENSMMMG00000009458) #28	CDC25C (ENSMMMG00000009475) #29	ENSMMMG00000009499	ENSMMMG00000009522	KDM3B (ENSMMMG00000009533) #31	REEP2 (ENSMMMG00000009566) #32	ENSMMMG00000009581	EGR1 (ENSMMMG00000009588) #34	ETF1 (ENSMMMG00000009600) #35
Hystricomorpha	ANCESTRAL SPECIES	27	ENSGT00940000154585.a	ENSGT01030000234638.b.b.c.b	ENSGT00390000014003	ENSGT00390000015874	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243.f	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00940000164705	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004.v.a #35	ENSGT00920000149123.n #36	ENSGT00940000160581 #37	ENSGT01030000234543.A.b
Hystricomorpha_a	ANCESTRAL SPECIES	24	ENSGT00940000154997	ENSGT00940000154585.a	ENSGT01030000234638.b.b.c.b	ENSGT00390000014003	ENSGT00390000015874	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243.f	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004.v.a #35	ENSGT00920000149123.n #36	ENSGT00940000160581 #37	ENSGT01030000234543.A.b	ENSGT00940000153909.b	ENSGT00940000153322.B
Guinea pig	MODERN SPECIES	1		PJA2 (ENSCPOG00000014595)	MAN2A1 (ENSCPOG00000007426)	TMEM232 (ENSCPOG00000004284)	SLC25A46 (ENSCPOG00000000136)	WDR36 (ENSCPOG00000014638)	CAMK4 (ENSCPOG00000007096)	STARD4 (ENSCPOG00000034348)	NREP (ENSCPOG00000031281)	EPB41L4A (ENSCPOG00000003079)	APC (ENSCPOG00000001588) #17	SRP19 (ENSCPOG00000036806) #18	REEP5 (ENSCPOG00000040258) #19	PKD2L2 (ENSCPOG00000013263) #20	FAM13B (ENSCPOG00000014446) #21	WNT8A (ENSCPOG00000000471) #22	NME5 (ENSCPOG00000008299) #23	ENSCPOG00000030233 #24	BRD8 (ENSCPOG00000008304) #24	KIF20A (ENSCPOG00000008312) #25	NLRP3 (ENSCPOG00000007681)	OR2B11 (ENSCPOG00000009561)	ENSCPOG00000001404	ENSCPOG00000020556	ENSCPOG00000009632	OR2G3 (ENSCPOG00000025278)	OR14L1P (ENSCPOG00000000113)	ENSCPOG00000039238	ENSCPOG00000000112	OR9H1P (ENSCPOG00000037418)	ENSCPOG00000012526
Hystricomorpha_b	ANCESTRAL SPECIES	50	ENSGT00940000154997	ENSGT00940000154585.a	ENSGT01030000234638.b.b.c.b	ENSGT00390000014003	ENSGT00390000015874.i	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243.f	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b #17	ENSGT00390000004950 #18	ENSGT00940000157873 #19	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004.v.a #35	ENSGT00920000149123.n #36	ENSGT00940000160581 #37	ENSGT01030000234543.A.b	ENSGT00940000153909.b	ENSGT00940000153322.B
Long-tailed chinchilla	MODERN SPECIES	125	FER (ENSCLAG00000006598)	PJA2 (ENSCLAG00000006412)	MAN2A1 (ENSCLAG00000006117)	TMEM232 (ENSCLAG00000005961)	ENSCLAG00000005875	WDR36 (ENSCLAG00000005745)	CAMK4 (ENSCLAG00000005659)	STARD4 (ENSCLAG00000005584)	NREP (ENSCLAG00000005557)	EPB41L4A (ENSCLAG00000005435)	APC (ENSCLAG00000004939) #17	ENSCLAG00000004791 #18	REEP5 (ENSCLAG00000004739) #19	PKD2L2 (ENSCLAG00000004561) #20	FAM13B (ENSCLAG00000004331) #21	WNT8A (ENSCLAG00000004232) #22	NME5 (ENSCLAG00000013063) #23	BRD8 (ENSCLAG00000012104) #24	KIF20A (ENSCLAG00000008096) #25	CDC23 (ENSCLAG00000007807) #26	GFRA3 (ENSCLAG00000007630) #28	FAM53C (ENSCLAG00000007533) #30	KDM3B (ENSCLAG00000007430) #31	REEP2 (ENSCLAG00000007323) #32	EGR1 (ENSCLAG00000007237) #34	ENSCLAG00000007158 #35	HSPA9 (ENSCLAG00000007065) #36	LRRTM2 (ENSCLAG00000006968) #37	CTNNA1 (ENSCLAG00000006856)	SIL1 (ENSCLAG00000006743)	ENSCLAG00000015998
Degu	MODERN SPECIES	210	TMEM232 (ENSODEG00000002934)	SLC25A46 (ENSODEG00000002885)	WDR36 (ENSODEG00000002759)	CAMK4 (ENSODEG00000002696)	ENSODEG00000002649	NREP (ENSODEG00000002632)	ENSODEG00000002618	EPB41L4A (ENSODEG00000002429)	ENSODEG00000002326 #17	ENSODEG00000003165	REEP5 (ENSODEG00000003116) #19	PKD2L2 (ENSODEG00000003052) #20	ENSODEG00000003008	FAM13B (ENSODEG00000002777) #21	ENSODEG00000002714	WNT8A (ENSODEG00000002689) #22	ENSODEG00000002679	NME5 (ENSODEG00000002579) #23	BRD8 (ENSODEG00000004963) #24	KIF20A (ENSODEG00000004654) #25	CDC23 (ENSODEG00000004579) #26	GFRA3 (ENSODEG00000004505) #28	FAM53C (ENSODEG00000004494) #30	KDM3B (ENSODEG00000004339) #31	REEP2 (ENSODEG00000004256) #32	EGR1 (ENSODEG00000004122) #34	ETF1 (ENSODEG00000003605) #35	HSPA9 (ENSODEG00000003533) #36	LRRTM2 (ENSODEG00000003494) #37	ENSODEG00000003483	CTNNA1 (ENSODEG00000003446)
Naked mole-rat female	MODERN SPECIES	25	ENSHGLG00000049741	WDR36 (ENSHGLG00000008804)	CAMK4 (ENSHGLG00000011480)	ENSHGLG00000037243	ENSHGLG00000039605	ENSHGLG00000039847	NREP (ENSHGLG00000014854)	EPB41L4A (ENSHGLG00000005035)	ENSHGLG00000002190	APC (ENSHGLG00000009943) #17	SRP19 (ENSHGLG00000006075) #18	ENSHGLG00000032619	ENSHGLG00000037840 #19	ENSHGLG00000019407 #20	ENSHGLG00000017643 #21	WNT8A (ENSHGLG00000050724) #22	NME5 (ENSHGLG00000005125) #23	BRD8 (ENSHGLG00000008574) #24	KIF20A (ENSHGLG00000013647) #25	CDC23 (ENSHGLG00000015847) #26	GFRA3 (ENSHGLG00000005227) #28	CDC25C (ENSHGLG00000046790) #29	ENSHGLG00000048679	FAM53C (ENSHGLG00000042605) #30	KDM3B (ENSHGLG00000004783) #31	REEP2 (ENSHGLG00000041963) #32	EGR1 (ENSHGLG00000048168) #34	ETF1 (ENSHGLG00000004503) #35	ENSHGLG00000005302 #36	LRRTM2 (ENSHGLG00000017761) #37	Ctnna1 (ENSHGLG00000007078)
Lagomorpha	ANCESTRAL SPECIES	3	ENSGT00940000159354	ENSGT00390000015384	ENSGT00940000159491	ENSGT00390000015484	ENSGT00530000063860.a	ENSGT00480000043246	ENSGT00940000155437	ENSGT00950000183227	ENSGT01060000248588.a.c.a	ENSGT00940000158371	ENSGT00940000157891	ENSGT00940000163511	ENSGT00940000159795	ENSGT00940000161122 #20	ENSGT00950000183033.a.b.b #21	ENSGT00940000157840 #22	ENSGT00940000159595 #23	ENSGT00530000064262 #24	ENSGT00940000156931 #25	ENSGT00950000182950.A #26	ENSGT00940000161256 #28	ENSGT00940000161460 #29	ENSGT00530000063371.C #30	ENSGT00940000158095 #31	ENSGT00940000160001 #32	ENSGT00940000160184 #34	ENSGT00390000009004 #35	ENSGT00920000149123.n #36	ENSGT01030000234543.A.b	ENSGT00940000160581 #37	ENSGT00940000153909.b
Rabbit	MODERN SPECIES	14	ENSOCUG00000029377	IL9 (ENSOCUG00000006369)	TGFBI (ENSOCUG00000004928)	LECT2 (ENSOCUG00000006380)	SMAD5 (ENSOCUG00000004937)	SMIM32 (ENSOCUG00000030642)	TRPC7 (ENSOCUG00000004943)	ENSOCUG00000021117	SPOCK1 (ENSOCUG00000009843)	KLHL3 (ENSOCUG00000007560)	ENSOCUG00000011240	ENSOCUG00000024173	MYOT (ENSOCUG00000014414)	PKD2L2 (ENSOCUG00000014419) #20	FAM13B (ENSOCUG00000014431) #21	WNT8A (ENSOCUG00000005191) #22	NME5 (ENSOCUG00000023232) #23	BRD8 (ENSOCUG00000008362) #24	KIF20A (ENSOCUG00000015790) #25	CDC23 (ENSOCUG00000008382) #26	GFRA3 (ENSOCUG00000008391) #28	CDC25C (ENSOCUG00000008399) #29	FAM53C (ENSOCUG00000008410) #30	KDM3B (ENSOCUG00000008421) #31	REEP2 (ENSOCUG00000008433) #32	EGR1 (ENSOCUG00000008439) #34	ETF1 (ENSOCUG00000006650) #35	HSPA9 (ENSOCUG00000006655) #36	CTNNA1 (ENSOCUG00000007744)	LRRTM2 (ENSOCUG00000007751) #37	SIL1 (ENSOCUG00000007752)
Pika	MODERN SPECIES	1712																ENSOPRG00000002752 #22	NME5 (ENSOPRG00000002763) #23	BRD8 (ENSOPRG00000002775) #24	KIF20A (ENSOPRG00000002846) #25	ENSOPRG00000002884 #26
Tree shrew	MODERN SPECIES	4445													MYOT (ENSTBEG00000016571)	PKD2L2 (ENSTBEG00000016760) #20	FAM13B (ENSTBEG00000017165) #21	WNT8A (ENSTBEG00000017413) #22