Percomorphaceae_B	ANCESTRAL SPECIES	15	ENSGT00960000186902	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Ovalentaria	ANCESTRAL SPECIES	12	ENSGT00960000186902	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Ovalentaria_B	ANCESTRAL SPECIES	15	ENSGT00960000186902	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Pomacentridae	ANCESTRAL SPECIES	7	ENSGT00390000003880.b.a #7	ENSGT00940000155884.a.d #8	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT01030000234992 #33	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Pomacentridae_A	ANCESTRAL SPECIES	6	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000155884.a.d #8	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT01030000234992 #33	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Amphiprion	ANCESTRAL SPECIES	16	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000155884.a.d #8	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT01030000234992 #33	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Orange clownfish	MODERN SPECIES	8	trappc3 (ENSAPEG00000020098) #7	ENSAPEG00000020083 #8	rims3 (ENSAPEG00000020030) #10	nup42 (ENSAPEG00000020008) #11	ENSAPEG00000019986 #12	osbpl3a (ENSAPEG00000019934) #13	TRIL (ENSAPEG00000019911) #14	ENSAPEG00000019901 #15	ENSAPEG00000019890 #15	jazf1a (ENSAPEG00000019873) #16	tax1bp1a (ENSAPEG00000019804) #17	hibadha (ENSAPEG00000019757) #18	evx1 (ENSAPEG00000019743) #19	hoxa13a (ENSAPEG00000019685) #20	hoxa11a (ENSAPEG00000019676) #21	hoxa10b (ENSAPEG00000019646) #22	ENSAPEG00000019634 #23	HOXA7 (ENSAPEG00000019614) #24	hoxa5a (ENSAPEG00000019578) #25	HOXA4 (ENSAPEG00000019567) #26	hoxa3a (ENSAPEG00000019555) #27	ENSAPEG00000019539 #28	hoxa1a (ENSAPEG00000019509) #29	snx10a (ENSAPEG00000019361) #30	cbx3a (ENSAPEG00000019335) #31	nfe2l3 (ENSAPEG00000019329) #32	ENSAPEG00000019310 #33	ENSAPEG00000019301	COLQ (ENSAPEG00000019258) #34	FKBP14 (ENSAPEG00000019236) #35	ENSAPEG00000019216 #36
Clown anemonefish	MODERN SPECIES	1052	ENSAOCG00000021397	ADGRB2 (ENSAOCG00000021381)	ptp4a2b (ENSAOCG00000021271)	col8a2 (ENSAOCG00000021228)	trappc3 (ENSAOCG00000021217) #7	ENSAOCG00000021189 #8	rims3 (ENSAOCG00000021180) #10	nup42 (ENSAOCG00000021141) #11	ENSAOCG00000021132 #12	osbpl3a (ENSAOCG00000021114) #13	TRIL (ENSAOCG00000021002) #14	ENSAOCG00000020977 #15	jazf1a (ENSAOCG00000002494) #16	tax1bp1a (ENSAOCG00000020906) #17	hibadha (ENSAOCG00000020824) #18	hoxa10b (ENSAOCG00000001942) #22	evx1 (ENSAOCG00000020769) #19	hoxa13a (ENSAOCG00000020728) #20	hoxa11a (ENSAOCG00000020636) #21	ENSAOCG00000020575 #23	HOXA7 (ENSAOCG00000020541) #24	hoxa5a (ENSAOCG00000020522) #25	HOXA4 (ENSAOCG00000020516) #26	hoxa3a (ENSAOCG00000020502) #27	ENSAOCG00000020489 #28	hoxa1a (ENSAOCG00000020470) #29
Spiny chromis	MODERN SPECIES	10	col8a2 (ENSAPOG00000020410)	trappc3 (ENSAPOG00000020444) #7	ENSAPOG00000020458 #8	rims3 (ENSAPOG00000020491) #10	nup42 (ENSAPOG00000020514) #11	ENSAPOG00000020527 #12	osbpl3a (ENSAPOG00000020643) #13	TRIL (ENSAPOG00000020703) #14	ENSAPOG00000020725 #15	JAZF1 (ENSAPOG00000020760) #16	tax1bp1a (ENSAPOG00000020841) #17	hibadha (ENSAPOG00000020887) #18	evx1 (ENSAPOG00000000596) #19	hoxa13a (ENSAPOG00000021038) #20	hoxa11a (ENSAPOG00000021108) #21	hoxa10b (ENSAPOG00000021132) #22	ENSAPOG00000021169 #23	HOXA7 (ENSAPOG00000021207) #24	hoxa5a (ENSAPOG00000021214) #25	HOXA4 (ENSAPOG00000021221) #26	hoxa3a (ENSAPOG00000021239) #27	ENSAPOG00000021248 #28	hoxa1a (ENSAPOG00000021294) #29
Bicolor damselfish	MODERN SPECIES	1727											tax1bp1a (ENSSPAG00000023369) #17	hibadha (ENSSPAG00000000072) #18	evx1 (ENSSPAG00000000089) #19	hoxa13a (ENSSPAG00000000108) #20	hoxa11a (ENSSPAG00000000114) #21	hoxa10b (ENSSPAG00000000124) #22	ENSSPAG00000000136 #23	HOXA7 (ENSSPAG00000000170) #24	hoxa5a (ENSSPAG00000000186) #25	HOXA4 (ENSSPAG00000000194) #26	hoxa3a (ENSSPAG00000000203) #27	ENSSPAG00000000207 #28	hoxa1a (ENSSPAG00000000269) #29
Cichlidae	ANCESTRAL SPECIES	7	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Pseudocrenilabrinae	ANCESTRAL SPECIES	12	ENSGT00390000003880.b.a #7	ENSGT00940000155884.a.d #8	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	9	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Haplochromini	ANCESTRAL SPECIES	5	ENSGT00390000003880.b.a #7	ENSGT00940000155884.a.d #8	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00960000188241	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36
Burton s mouthbrooder	MODERN SPECIES	367					nup42 (ENSHBUG00000016399) #11	ENSHBUG00000016420 #12	osbpl3a (ENSHBUG00000016525) #13	TRIL (ENSHBUG00000016567) #14	ENSHBUG00000000487 #15	jazf1a (ENSHBUG00000016620) #16	tax1bp1a (ENSHBUG00000016633) #17	hibadha (ENSHBUG00000016662) #18	evx1 (ENSHBUG00000016678) #19	hoxa13a (ENSHBUG00000016694) #20	hoxa11a (ENSHBUG00000016706) #21	hoxa10b (ENSHBUG00000016715) #22	ENSHBUG00000016721 #23	HOXA7 (ENSHBUG00000016753) #24	hoxa5a (ENSHBUG00000016757) #25	HOXA4 (ENSHBUG00000016766) #26	hoxa3a (ENSHBUG00000016774) #27	ENSHBUG00000016786 #28	hoxa1a (ENSHBUG00000016813) #29	snx10a (ENSHBUG00000017009) #30	cbx3a (ENSHBUG00000017035) #31	nfe2l3 (ENSHBUG00000017043) #32	ENSHBUG00000017056	ENSHBUG00000000517	ENSHBUG00000017296 #34	FKBP14 (ENSHBUG00000017312) #35	ENSHBUG00000017327 #36
Haplochromini_A	ANCESTRAL SPECIES	5	ENSGT00390000003880.b.a #7	ENSGT00940000155884.a.d #8	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00960000188241	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36
P. nyererei	MODERN SPECIES	325	col8a2 (ENSPNYG00000021113)	trappc3 (ENSPNYG00000021098) #7	smap2 (ENSPNYG00000021078) #9	rims3 (ENSPNYG00000021062) #10	nup42 (ENSPNYG00000021054) #11	ENSPNYG00000021034 #12	osbpl3a (ENSPNYG00000021001) #13	TRIL (ENSPNYG00000020984) #14	ENSPNYG00000020970 #15	jazf1a (ENSPNYG00000020954) #16	tax1bp1a (ENSPNYG00000020912) #17	hibadha (ENSPNYG00000020895) #18	evx1 (ENSPNYG00000020879) #19	hoxa13a (ENSPNYG00000020872) #20	hoxa11a (ENSPNYG00000020865) #21	hoxa10b (ENSPNYG00000020854) #22	ENSPNYG00000020845 #23	HOXA7 (ENSPNYG00000020831) #24	hoxa5a (ENSPNYG00000020824) #25	HOXA4 (ENSPNYG00000020799) #26	hoxa3a (ENSPNYG00000020795) #27	ENSPNYG00000020762 #28	hoxa1a (ENSPNYG00000020732) #29	snx10a (ENSPNYG00000020679) #30	cbx3a (ENSPNYG00000020660) #31	nfe2l3 (ENSPNYG00000020654) #32	ENSPNYG00000020637	ENSPNYG00000020598	FKBP14 (ENSPNYG00000020583) #35	ENSPNYG00000020546 #36	ENSPNYG00000020536 #37
Haplochromini_B	ANCESTRAL SPECIES	1	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000155884.a.d #8	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Zebra mbuna	MODERN SPECIES	1104	col8a2 (ENSMZEG00005010509)	trappc3 (ENSMZEG00005010494) #7	ENSMZEG00005010474 #8	rims3 (ENSMZEG00005010454) #10	nup42 (ENSMZEG00005010447) #11	ENSMZEG00005010434 #12	osbpl3a (ENSMZEG00005010389) #13	TRIL (ENSMZEG00005010370) #14	ENSMZEG00005010360 #15	jazf1a (ENSMZEG00005010334) #16	tax1bp1a (ENSMZEG00005010312) #17	hibadha (ENSMZEG00005010300) #18	evx1 (ENSMZEG00005010281) #19	hoxa13a (ENSMZEG00005010249) #20	hoxa11a (ENSMZEG00005010243) #21	hoxa10b (ENSMZEG00005010234) #22	ENSMZEG00005010211 #23	HOXA7 (ENSMZEG00005010189) #24	hoxa5a (ENSMZEG00005010174) #25	HOXA4 (ENSMZEG00005010169) #26	hoxa3a (ENSMZEG00005010153) #27	ENSMZEG00005010136 #28	hoxa1a (ENSMZEG00005010106) #29	snx10a (ENSMZEG00005010098) #30	cbx3a (ENSMZEG00005010086) #31	nfe2l3 (ENSMZEG00005010077) #32	ENSMZEG00005010069	ENSMZEG00005009664	ENSMZEG00005009648 #34	FKBP14 (ENSMZEG00005009610) #35	ENSMZEG00005009600 #36
Eastern happy	MODERN SPECIES	13	col8a2 (ENSACLG00000002115)	trappc3 (ENSACLG00000002073) #7	ENSACLG00000002062 #8	rims3 (ENSACLG00000001737) #10	nup42 (ENSACLG00000001722) #11	ENSACLG00000001705 #12	osbpl3a (ENSACLG00000001532) #13	TRIL (ENSACLG00000001487) #14	ENSACLG00000001476 #15	jazf1a (ENSACLG00000001447) #16	tax1bp1a (ENSACLG00000001428) #17	hibadha (ENSACLG00000001395) #18	evx1 (ENSACLG00000001390) #19	hoxa13a (ENSACLG00000001370) #20	hoxa11a (ENSACLG00000001279) #21	hoxa10b (ENSACLG00000001266) #22	ENSACLG00000001248 #23	HOXA7 (ENSACLG00000001195) #24	hoxa5a (ENSACLG00000001190) #25	HOXA4 (ENSACLG00000001184) #26	hoxa3a (ENSACLG00000001177) #27	ENSACLG00000001166 #28	hoxa1a (ENSACLG00000001107) #29	SNX10 (ENSACLG00000000984) #30	cbx3a (ENSACLG00000000964) #31	snx10a (ENSACLG00000000942) #30	cbx3a (ENSACLG00000000888) #31	nfe2l3 (ENSACLG00000000873) #32	ENSACLG00000000868	ENSACLG00000000794	COLQ (ENSACLG00000000784) #34
Lyretail cichlid	MODERN SPECIES	302	trappc3 (ENSNBRG00000004294) #7	smap2 (ENSNBRG00000004327) #9	rims3 (ENSNBRG00000004399) #10	nup42 (ENSNBRG00000004424) #11	ENSNBRG00000004442 #12	osbpl3a (ENSNBRG00000004455) #13	ENSNBRG00000004507	ENSNBRG00000004534 #15	jazf1a (ENSNBRG00000004558) #16	jazf1a (ENSNBRG00000004573) #16	tax1bp1a (ENSNBRG00000004586) #17	hibadha (ENSNBRG00000004647) #18	evx1 (ENSNBRG00000004662) #19	hoxa13a (ENSNBRG00000004706) #20	hoxa11a (ENSNBRG00000004716) #21	hoxa10b (ENSNBRG00000004742) #22	ENSNBRG00000004756 #23	HOXA7 (ENSNBRG00000004775) #24	hoxa5a (ENSNBRG00000004795) #25	HOXA4 (ENSNBRG00000004812) #26	hoxa3a (ENSNBRG00000004849) #27	ENSNBRG00000004855 #28	hoxa1a (ENSNBRG00000004915) #29	snx10a (ENSNBRG00000004965) #30	cbx3a (ENSNBRG00000005093) #31	nfe2l3 (ENSNBRG00000005122) #32	ENSNBRG00000005134	ENSNBRG00000005171	ENSNBRG00000005295 #34	FKBP14 (ENSNBRG00000005325) #35	FKBP14 (ENSNBRG00000005341) #35
Nile tilapia	MODERN SPECIES	13	col8a2 (ENSONIG00000038111)	trappc3 (ENSONIG00000038477) #7	ENSONIG00000042045 #8	ENSONIG00000035265	rims3 (ENSONIG00000004620) #10	nup42 (ENSONIG00000037233) #11	ENSONIG00000004618 #12	osbpl3a (ENSONIG00000004610) #13	ENSONIG00000034494	jazf1a (ENSONIG00000042804) #16	tax1bp1a (ENSONIG00000004605) #17	hibadha (ENSONIG00000004603) #18	evx1 (ENSONIG00000027928) #19	hoxa13 (ENSONIG00000029807) #20	hoxa11a (ENSONIG00000004600) #21	hoxa10b (ENSONIG00000004598) #22	ENSONIG00000004597 #23	HOXA7 (ENSONIG00000004596) #24	hoxa5a (ENSONIG00000004595) #25	HOXA4 (ENSONIG00000004594) #26	hoxa3a (ENSONIG00000004593) #27	ENSONIG00000004592 #28	hoxa1a (ENSONIG00000004591) #29	snx10a (ENSONIG00000004590) #30	cbx3a (ENSONIG00000004588) #31	nfe2l3 (ENSONIG00000004586) #32	ENSONIG00000004585	ENSONIG00000008589	ENSONIG00000004581 #34	FKBP14 (ENSONIG00000004578) #35	ENSONIG00000004576 #36
Atherinomorphae	ANCESTRAL SPECIES	12	ENSGT00960000186902	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Cyprinodontiformes	ANCESTRAL SPECIES	10	ENSGT00960000186902	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157883.a.b.f.pb.b	ENSGT00940000157883.a.b.f.pb.a	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35
Aplocheiloidei	ANCESTRAL SPECIES	9	ENSGT00960000186902	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157883.a.b.f.pb.a	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36
Mangrove rivulus	MODERN SPECIES	2	ENSKMAG00000018503	trappc3 (ENSKMAG00000018518) #7	ENSKMAG00000018554 #8	rims3 (ENSKMAG00000018578) #10	nup42 (ENSKMAG00000018611) #11	ENSKMAG00000018632 #12	osbpl3a (ENSKMAG00000018663) #13	TRIL (ENSKMAG00000018754) #14	ENSKMAG00000018769 #15	jazf1a (ENSKMAG00000018788) #16	tax1bp1a (ENSKMAG00000018833) #17	hibadha (ENSKMAG00000018892) #18	evx1 (ENSKMAG00000018913) #19	hoxa13a (ENSKMAG00000018947) #20	hoxa11a (ENSKMAG00000018955) #21	hoxa10b (ENSKMAG00000018961) #22	ENSKMAG00000018970 #23	HOXA7 (ENSKMAG00000018979) #24	hoxa5a (ENSKMAG00000018990) #25	HOXA4 (ENSKMAG00000019005) #26	hoxa3a (ENSKMAG00000019016) #27	ENSKMAG00000019031 #28	hoxa1a (ENSKMAG00000019048) #29	snx10a (ENSKMAG00000019100) #30	cbx3a (ENSKMAG00000019244) #31	nfe2l3 (ENSKMAG00000019254) #32	ENSKMAG00000019264	ENSKMAG00000019288	COLQ (ENSKMAG00000019299) #34	FKBP14 (ENSKMAG00000019327) #35	ENSKMAG00000019351 #36
Turquoise killifish	MODERN SPECIES	1618	smap2 (ENSNFUG00015006095) #9	RIMS3 (ENSNFUG00015006090) #10	NUPL2 (ENSNFUG00015006085) #11	ENSNFUG00015006081	ENSNFUG00015006076 #12	OSBPL3A (ENSNFUG00015005984) #13	TRIL (ENSNFUG00015005963) #14	ENSNFUG00015005960 #15	ENSNFUG00015005958	jazf1a (ENSNFUG00015005952) #16	tax1bp1a (ENSNFUG00015005921) #17	HIBADHA (ENSNFUG00015005906) #18	evx1 (ENSNFUG00015005899) #19	hoxa13a (ENSNFUG00015005897) #20	hoxa11a (ENSNFUG00015005895) #21	hoxa10b (ENSNFUG00015005892) #22	ENSNFUG00015005887 #23	HOXA7 (ENSNFUG00015005885) #24	HOXA5A (ENSNFUG00015005877) #25	HOXA4 (ENSNFUG00015005870) #26	hoxa3a (ENSNFUG00015005867) #27	ENSNFUG00015005862 #28	hoxa1a (ENSNFUG00015005861) #29	snx10a (ENSNFUG00015005838) #30	CBX3A (ENSNFUG00015005822) #31	NFE2L3 (ENSNFUG00015005812) #32	ENSNFUG00015005804	COLQ (ENSNFUG00015005797) #34	FKBP14 (ENSNFUG00015005790) #35	ENSNFUG00015005782 #36	ENSNFUG00015005779 #37
Cyprinodontoidei	ANCESTRAL SPECIES	11	ENSGT00960000186902	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157883.a.b.f.pb.b	ENSGT00940000157883.a.b.f.pb.a	ENSGT00940000157248.c.b #34	ENSGT00940000162818.c.b.e.a.a
Poeciliinae	ANCESTRAL SPECIES	18	ENSGT00390000003880.b.a #7	ENSGT00940000155884.a.d #8	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157883.a.b.f.pb.b	ENSGT00940000157883.a.b.f.pb.a	ENSGT00940000157248.c.b #34	ENSGT00940000162818.c.b.e.a.a
Poecilia	ANCESTRAL SPECIES	24	ENSGT00390000003880.b.a #7	ENSGT00940000155884.a.d #8	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157883.a.b.f.pb.b	ENSGT00940000157883.a.b.f.pb.a	ENSGT00940000157248.c.b #34	ENSGT00940000162818.c.b.e.a.a
NAME_6	ANCESTRAL SPECIES	131	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157883.a.b.f.pb.b	ENSGT00940000157883.a.b.f.pb.a	ENSGT00940000157248.c.b #34	ENSGT00940000162818.c.b.e.a.a
Sailfin molly	MODERN SPECIES	141		trappc3 (ENSPLAG00000022436) #7	smap2 (ENSPLAG00000022418) #9	rims3 (ENSPLAG00000022389) #10	nup42 (ENSPLAG00000022371) #11	ENSPLAG00000022362 #12	osbpl3a (ENSPLAG00000022345) #13	TRIL (ENSPLAG00000022255) #14	ENSPLAG00000022243 #15	jazf1a (ENSPLAG00000022239) #16	tax1bp1a (ENSPLAG00000022213) #17	hibadha (ENSPLAG00000022107) #18	evx1 (ENSPLAG00000022075) #19	hoxa13a (ENSPLAG00000022061) #20	hoxa11a (ENSPLAG00000022048) #21	ENSPLAG00000022003 #22	ENSPLAG00000021989 #23	HOXA7 (ENSPLAG00000021952) #24	hoxa5a (ENSPLAG00000021936) #25	HOXA4 (ENSPLAG00000021895) #26	hoxa3a (ENSPLAG00000021890) #27	ENSPLAG00000021887 #28	hoxa1a (ENSPLAG00000021884) #29	snx10a (ENSPLAG00000021857) #30	cbx3a (ENSPLAG00000021841) #31	nfe2l3 (ENSPLAG00000021833) #32	ENSPLAG00000021827	ENSPLAG00000021808	ENSPLAG00000021801	ENSPLAG00000021790	FKBP14 (ENSPLAG00000021776) #35
Amazon molly	MODERN SPECIES	389	col8a2 (ENSPFOG00000001371)	trappc3 (ENSPFOG00000001402) #7	ENSPFOG00000001480 #8	rims3 (ENSPFOG00000001562) #10	nup42 (ENSPFOG00000001612) #11	ENSPFOG00000001659 #12	osbpl3a (ENSPFOG00000001768) #13	TRIL (ENSPFOG00000020428) #14	ENSPFOG00000002064 #15	jazf1a (ENSPFOG00000002162) #16	tax1bp1a (ENSPFOG00000002209) #17	hibadha (ENSPFOG00000002325) #18	evx1 (ENSPFOG00000002469) #19	hoxa13a (ENSPFOG00000002494) #20	hoxa11a (ENSPFOG00000024708) #21	hoxa10b (ENSPFOG00000002523) #22	ENSPFOG00000002585 #23	HOXA7 (ENSPFOG00000002599) #24	hoxa5a (ENSPFOG00000002629) #25	HOXA4 (ENSPFOG00000021687) #26	hoxa3a (ENSPFOG00000002649) #27	ENSPFOG00000022132 #28	hoxa1a (ENSPFOG00000002670) #29	snx10a (ENSPFOG00000002685) #30	cbx3a (ENSPFOG00000002688) #31	nfe2l3 (ENSPFOG00000002719) #32	ENSPFOG00000002750	ENSPFOG00000002759	ENSPFOG00000002764	ENSPFOG00000002807 #34	ENSPFOG00000002970
Guppy	MODERN SPECIES	441	ENSPREG00000021432	trappc3 (ENSPREG00000021442) #7	ENSPREG00000021452 #8	rims3 (ENSPREG00000021462) #10	nup42 (ENSPREG00000021471) #11	ENSPREG00000021480 #12	osbpl3a (ENSPREG00000021509) #13	TRIL (ENSPREG00000021545) #14	ENSPREG00000021553 #15	jazf1a (ENSPREG00000021580) #16	tax1bp1a (ENSPREG00000021617) #17	hibadha (ENSPREG00000021657) #18	evx1 (ENSPREG00000021672) #19	hoxa13a (ENSPREG00000021694) #20	hoxa11a (ENSPREG00000021710) #21	hoxa10b (ENSPREG00000021717) #22	ENSPREG00000021719 #23	hoxa5a (ENSPREG00000021725) #25	HOXA4 (ENSPREG00000000563) #26	hoxa3a (ENSPREG00000000557) #27	ENSPREG00000000568 #28	hoxa1a (ENSPREG00000000658) #29	snx10a (ENSPREG00000000706) #30	cbx3a (ENSPREG00000000774) #31	nfe2l3 (ENSPREG00000000792) #32	ENSPREG00000000800	ENSPREG00000000816	ENSPREG00000000998 #34	ENSPREG00000001010	ENSPREG00000001059	ENSPREG00000001089 #36
Platyfish	MODERN SPECIES	4	col8a2 (ENSXMAG00000029783)	trappc3 (ENSXMAG00000010634) #7	ENSXMAG00000010637 #8	rims3 (ENSXMAG00000010647) #10	nup42 (ENSXMAG00000010651) #11	ENSXMAG00000010652 #12	osbpl3a (ENSXMAG00000001083) #13	ENSXMAG00000020864	ENSXMAG00000001066 #15	jazf1a (ENSXMAG00000025678) #16	tax1bp1a (ENSXMAG00000010881) #17	hibadha (ENSXMAG00000027716) #18	evx1 (ENSXMAG00000028620) #19	hoxa13a (ENSXMAG00000001062) #20	hoxa11a (ENSXMAG00000027852) #21	hoxa10b (ENSXMAG00000029054) #22	ENSXMAG00000001057 #23	HOXA7 (ENSXMAG00000026689) #24	hoxa5a (ENSXMAG00000001054) #25	HOXA4 (ENSXMAG00000023150) #26	hoxa3a (ENSXMAG00000028550) #27	ENSXMAG00000001041 #28	hoxa1a (ENSXMAG00000001039) #29	snx10a (ENSXMAG00000001035) #30	cbx3a (ENSXMAG00000001027) #31	nfe2l3 (ENSXMAG00000021020) #32	ENSXMAG00000001014	ENSXMAG00000026168 #34	ENSXMAG00000025378	ENSXMAG00000020144	FKBP14 (ENSXMAG00000026229) #35
NAME_4	ANCESTRAL SPECIES	107	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157883.a.b.f.pb.b	ENSGT00940000157883.a.b.f.pb.a	ENSGT00940000157248.c.b #34	ENSGT00940000162818.c.b.e.a.a
Sheepshead minnow	MODERN SPECIES	210	col8a2 (ENSCVAG00000010343)	trappc3 (ENSCVAG00000010339) #7	ENSCVAG00000010322 #8	rims3 (ENSCVAG00000010314) #10	ENSCVAG00000010294 #11	ENSCVAG00000010274 #12	osbpl3a (ENSCVAG00000010263) #13	ENSCVAG00000010188	ENSCVAG00000010172 #15	jazf1a (ENSCVAG00000010159) #16	tax1bp1a (ENSCVAG00000000881) #17	hibadha (ENSCVAG00000010129) #18	evx1 (ENSCVAG00000010081) #19	hoxa13a (ENSCVAG00000010073) #20	hoxa11a (ENSCVAG00000010064) #21	hoxa10b (ENSCVAG00000010058) #22	ENSCVAG00000010053 #23	HOXA7 (ENSCVAG00000010047) #24	hoxa5a (ENSCVAG00000010032) #25	hoxa3a (ENSCVAG00000010027) #27	HOXA4 (ENSCVAG00000010012) #26	ENSCVAG00000010007 #28	hoxa1a (ENSCVAG00000009993) #29	snx10a (ENSCVAG00000009971) #30	cbx3a (ENSCVAG00000009811) #31	nfe2l3 (ENSCVAG00000009783) #32	npvf (ENSCVAG00000009777)	ENSCVAG00000009771	COLQ (ENSCVAG00000009761) #34	ENSCVAG00000009691	FKBP14 (ENSCVAG00000009636) #35
Mummichog	MODERN SPECIES	2329	col8a2 (ENSFHEG00000000321)	trappc3 (ENSFHEG00000013629) #7	smap2 (ENSFHEG00000013666) #9	rims3 (ENSFHEG00000013684) #10	nup42 (ENSFHEG00000013692) #11	ENSFHEG00000013700 #12	osbpl3a (ENSFHEG00000013709) #13	TRIL (ENSFHEG00000013715) #14	ENSFHEG00000013720 #15	jazf1a (ENSFHEG00000013733) #16	tax1bp1a (ENSFHEG00000013748) #17	hibadha (ENSFHEG00000013773) #18	evx1 (ENSFHEG00000013781) #19	hoxa13a (ENSFHEG00000013789) #20	hoxa11a (ENSFHEG00000013797) #21	hoxa10b (ENSFHEG00000013805) #22	ENSFHEG00000013809 #23	HOXA7 (ENSFHEG00000013819) #24	hoxa5a (ENSFHEG00000013822) #25	HOXA4 (ENSFHEG00000013828) #26	hoxa3a (ENSFHEG00000013849) #27	ENSFHEG00000013857 #28	hoxa1a (ENSFHEG00000013905) #29	snx10a (ENSFHEG00000014090) #30	cbx3a (ENSFHEG00000014100) #31	nfe2l3 (ENSFHEG00000014108) #32	NPVF (ENSFHEG00000014120)	ENSFHEG00000014122	ENSFHEG00000014131	COLQ (ENSFHEG00000014155) #34	FKBP14 (ENSFHEG00000014170) #35
Oryzias	ANCESTRAL SPECIES	22	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Oryzias_b	ANCESTRAL SPECIES	22	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Indian medaka	MODERN SPECIES	3	col8a2 (ENSOMEG00000019173)	trappc3 (ENSOMEG00000019153) #7	smap2 (ENSOMEG00000019127) #9	rims3 (ENSOMEG00000019104) #10	nup42 (ENSOMEG00000019078) #11	ENSOMEG00000019056 #12	osbpl3a (ENSOMEG00000019036) #13	TRIL (ENSOMEG00000018990) #14	ENSOMEG00000018974 #15	jazf1a (ENSOMEG00000018946) #16	tax1bp1a (ENSOMEG00000018894) #17	hibadha (ENSOMEG00000018845) #18	evx1 (ENSOMEG00000018828) #19	hoxa13a (ENSOMEG00000018800) #20	hoxa11a (ENSOMEG00000018787) #21	hoxa10b (ENSOMEG00000000716) #22	ENSOMEG00000018763 #23	HOXA7 (ENSOMEG00000018749) #24	hoxa5a (ENSOMEG00000018736) #25	hoxa3a (ENSOMEG00000018727) #27	HOXA4 (ENSOMEG00000018715) #26	ENSOMEG00000000777 #28	hoxa1a (ENSOMEG00000018694) #29	snx10a (ENSOMEG00000018674) #30	cbx3a (ENSOMEG00000018650) #31	nfe2l3 (ENSOMEG00000018610) #32	ENSOMEG00000018577	ENSOMEG00000018555 #34	FKBP14 (ENSOMEG00000018518) #35	ENSOMEG00000018495 #36	ENSOMEG00000018478 #37
Javanese ricefish	MODERN SPECIES	2	col8a2 (ENSOJAG00000003180)	trappc3 (ENSOJAG00000003187) #7	smap2 (ENSOJAG00000003200) #9	rims3 (ENSOJAG00000003209) #10	nup42 (ENSOJAG00000003218) #11	ENSOJAG00000003225 #12	osbpl3a (ENSOJAG00000003244) #13	TRIL (ENSOJAG00000003583) #14	ENSOJAG00000003593 #15	jazf1a (ENSOJAG00000003619) #16	tax1bp1a (ENSOJAG00000003658) #17	hibadha (ENSOJAG00000003690) #18	evx1 (ENSOJAG00000003773) #19	hoxa13a (ENSOJAG00000003786) #20	hoxa11a (ENSOJAG00000003810) #21	hoxa10b (ENSOJAG00000003838) #22	ENSOJAG00000003848 #23	HOXA7 (ENSOJAG00000003886) #24	hoxa5a (ENSOJAG00000003979) #25	HOXA4 (ENSOJAG00000004001) #26	hoxa3a (ENSOJAG00000004029) #27	ENSOJAG00000004052 #28	hoxa1a (ENSOJAG00000004073) #29	snx10a (ENSOJAG00000004089) #30	cbx3a (ENSOJAG00000004172) #31	nfe2l3 (ENSOJAG00000004247) #32	ENSOJAG00000004264	ENSOJAG00000004275 #34	FKBP14 (ENSOJAG00000004301) #35	ENSOJAG00000004313 #37	oxnad1 (ENSOJAG00000004338)
Oryzias_a	ANCESTRAL SPECIES	30	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Japanese Medaka HdrR	MODERN SPECIES	2	trappc3 (ENSORLG00000030170) #7	smap2 (ENSORLG00000028329) #9	rims3 (ENSORLG00000005207) #10	nup42 (ENSORLG00000027168) #11	ENSORLG00000005186 #12	osbpl3a (ENSORLG00000005177) #13	TRIL (ENSORLG00000005131) #14	ENSORLG00000005125 #15	jazf1a (ENSORLG00000005107) #16	ENSORLG00000023632	tax1bp1a (ENSORLG00000005098) #17	hibadha (ENSORLG00000005067) #18	evx1 (ENSORLG00000005050) #19	hoxa13a (ENSORLG00000005043) #20	hoxa11a (ENSORLG00000005037) #21	ENSORLG00000005034 #22	hoxa9a (ENSORLG00000027463) #23	HOXA7 (ENSORLG00000023188) #24	hoxa5a (ENSORLG00000026145) #25	HOXA4 (ENSORLG00000005025) #26	hoxa3a (ENSORLG00000027867) #27	ENSORLG00000004987 #28	hoxa1a (ENSORLG00000004981) #29	snx10a (ENSORLG00000026166) #30	cbx3a (ENSORLG00000029462) #31	nfe2l3 (ENSORLG00000004962) #32	ENSORLG00000025295	ENSORLG00000004944 #34	FKBP14 (ENSORLG00000004912) #35	ENSORLG00000025388 #36	ENSORLG00000004907 #37
Chinese medaka	MODERN SPECIES	1110	col8a2 (ENSOSIG00000008704)	trappc3 (ENSOSIG00000008706) #7	smap2 (ENSOSIG00000008708) #9	ENSOSIG00000008709 #9	rims3 (ENSOSIG00000008710) #10	nup42 (ENSOSIG00000008711) #11	osbpl3a (ENSOSIG00000008712) #13	TRIL (ENSOSIG00000010071) #14	ENSOSIG00000010072 #15	jazf1a (ENSOSIG00000010073) #16	tax1bp1a (ENSOSIG00000010075) #17	hibadha (ENSOSIG00000010076) #18	evx1 (ENSOSIG00000010128) #19	hoxa13a (ENSOSIG00000010129) #20	hoxa11a (ENSOSIG00000010131) #21	hoxa10b (ENSOSIG00000010133) #22	ENSOSIG00000010135 #23	HOXA7 (ENSOSIG00000010138) #24	hoxa5a (ENSOSIG00000010140) #25	HOXA4 (ENSOSIG00000010142) #26	hoxa3a (ENSOSIG00000010145) #27	hoxa1a (ENSOSIG00000010147) #29	snx10a (ENSOSIG00000010148) #30	cbx3a (ENSOSIG00000010157) #31	nfe2l3 (ENSOSIG00000010197) #32	ENSOSIG00000010198 #33	FKBP14 (ENSOSIG00000010199) #35	ENSOSIG00000010200 #36	ENSOSIG00000010214	oxnad1 (ENSOSIG00000010218)	ENSOSIG00000010221
Percomorphaceae_C	ANCESTRAL SPECIES	15	ENSGT00960000186902	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Percomorphaceae_D	ANCESTRAL SPECIES	14	ENSGT00960000186902	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Anabantaria	ANCESTRAL SPECIES	16	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Zig-zag eel	MODERN SPECIES	2	ENSMAMG00000027164	trappc3 (ENSMAMG00000025439) #7	ENSMAMG00000007594 #9	ENSMAMG00000007605 #10	ENSMAMG00000007625 #11	ENSMAMG00000007640 #12	ENSMAMG00000007664 #13	TRIL (ENSMAMG00000007728) #14	ENSMAMG00000007742 #15	JAZF1 (ENSMAMG00000027007) #16	tax1bp1a (ENSMAMG00000007765) #17	hibadha (ENSMAMG00000007830) #18	evx1 (ENSMAMG00000007854) #19	ENSMAMG00000007871 #20	hoxa11a (ENSMAMG00000007883) #21	ENSMAMG00000007887 #22	ENSMAMG00000007899 #23	ENSMAMG00000025324	HOXA7 (ENSMAMG00000027947) #24	hoxa5a (ENSMAMG00000025732) #25	HOXA4 (ENSMAMG00000007955) #26	hoxa3a (ENSMAMG00000007941) #27	ENSMAMG00000007958 #28	HOXA1 (ENSMAMG00000007973) #29	snx10a (ENSMAMG00000007992) #30	CBX3 (ENSMAMG00000008011) #31	nfe2l3 (ENSMAMG00000008016) #32	ENSMAMG00000008025 #33	ENSMAMG00000008039 #34	ENSMAMG00000027344 #35	ENSMAMG00000008087 #36
Anabantoidei	ANCESTRAL SPECIES	19	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Siamese fighting fish	MODERN SPECIES	2	angpt2b (ENSBSLG00000007679)	ADGRB2 (ENSBSLG00000007960)	ENSBSLG00000009376	ptp4a2b (ENSBSLG00000009712)	ENSBSLG00000009795	trappc3 (ENSBSLG00000009810) #7	smap2 (ENSBSLG00000009858) #9	rims3 (ENSBSLG00000009887) #10	nup42 (ENSBSLG00000009916) #11	ENSBSLG00000009937 #12	osbpl3a (ENSBSLG00000009971) #13	TRIL (ENSBSLG00000010166) #14	jazf1a (ENSBSLG00000010180) #16	tax1bp1a (ENSBSLG00000010674) #17	hibadha (ENSBSLG00000010856) #18	ENSBSLG00000011586 #22	evx1 (ENSBSLG00000011641) #19	hoxa13a (ENSBSLG00000011697) #20	hoxa11a (ENSBSLG00000011737) #21	HOXA7 (ENSBSLG00000011758) #24	hoxa5a (ENSBSLG00000011797) #25	HOXA4 (ENSBSLG00000011815) #26	hoxa3a (ENSBSLG00000011839) #27	ENSBSLG00000011861 #28	hoxa1a (ENSBSLG00000011877) #29	snx10a (ENSBSLG00000011898) #30	cbx3a (ENSBSLG00000011919) #31	nfe2l3 (ENSBSLG00000012036) #32	ENSBSLG00000012060	ENSBSLG00000012090 #34	FKBP14 (ENSBSLG00000012125) #35
Climbing perch	MODERN SPECIES	2	ENSATEG00000025493	trappc3 (ENSATEG00000026325) #7	ENSATEG00000029594 #8	ENSATEG00000002280 #10	ENSATEG00000002228 #11	ENSATEG00000002213 #12	ENSATEG00000002124 #13	TRIL (ENSATEG00000029886) #14	ENSATEG00000002087 #15	JAZF1 (ENSATEG00000002071) #16	tax1bp1a (ENSATEG00000002002) #17	hibadha (ENSATEG00000001998) #18	evx1 (ENSATEG00000001945) #19	ENSATEG00000026862 #20	hoxa11a (ENSATEG00000001926) #21	ENSATEG00000001918 #22	ENSATEG00000001859 #23	hoxa5a (ENSATEG00000001828) #25	HOXA4 (ENSATEG00000028592) #26	HOXA3 (ENSATEG00000001808) #27	ENSATEG00000001763 #28	HOXA1 (ENSATEG00000001717) #29	snx10a (ENSATEG00000001661) #30	CBX3 (ENSATEG00000001629) #31	nfe2l3 (ENSATEG00000001620) #32	ENSATEG00000001574	ENSATEG00000001525 #34	ENSATEG00000001514 #35	ENSATEG00000001464 #36	ENSATEG00000001434 #37	oxnad1 (ENSATEG00000001424)
Carangaria	ANCESTRAL SPECIES	14	ENSGT00960000186902	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT01030000234992 #33	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Carangaria_A	ANCESTRAL SPECIES	16	ENSGT00960000186902	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab.b #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Seriola	ANCESTRAL SPECIES	12	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab.b #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Yellowtail amberjack	MODERN SPECIES	3204	col8a2 (ENSSLDG00000006572)	trappc3 (ENSSLDG00000006549) #7	smap2 (ENSSLDG00000006519) #9	rims3 (ENSSLDG00000006487) #10	nup42 (ENSSLDG00000006438) #11	ENSSLDG00000006408 #12	osbpl3a (ENSSLDG00000006313) #13	ENSSLDG00000006275	ENSSLDG00000006258 #15	jazf1a (ENSSLDG00000006230) #16	tax1bp1a (ENSSLDG00000006207) #17	hibadha (ENSSLDG00000006181) #18	evx1 (ENSSLDG00000006166) #19	hoxa13a (ENSSLDG00000006148) #20	hoxa11a (ENSSLDG00000006095) #21	hoxa10b (ENSSLDG00000006083) #22	ENSSLDG00000006063 #23	HOXA7 (ENSSLDG00000006049) #24	hoxa5a (ENSSLDG00000006039) #25	HOXA4 (ENSSLDG00000006027) #26	hoxa3a (ENSSLDG00000006013) #27	ENSSLDG00000005939 #28	hoxa1a (ENSSLDG00000005844) #29	snx10a (ENSSLDG00000005732) #30	cbx3a (ENSSLDG00000005680) #31	nfe2l3 (ENSSLDG00000005672) #32	ENSSLDG00000005659	ENSSLDG00000005643	COLQ (ENSSLDG00000005618) #34	FKBP14 (ENSSLDG00000005590) #35	ENSSLDG00000005567 #36
Greater amberjack	MODERN SPECIES	48	ptp4a2b (ENSSDUG00000004204)	col8a2 (ENSSDUG00000004214)	trappc3 (ENSSDUG00000004221) #7	smap2 (ENSSDUG00000004248) #9	rims3 (ENSSDUG00000004261) #10	nup42 (ENSSDUG00000004296) #11	ENSSDUG00000004322 #12	osbpl3a (ENSSDUG00000004357) #13	TRIL (ENSSDUG00000004429) #14	ENSSDUG00000004437 #15	jazf1a (ENSSDUG00000004450) #16	tax1bp1a (ENSSDUG00000004489) #17	hibadha (ENSSDUG00000004564) #18	evx1 (ENSSDUG00000004583) #19	hoxa13a (ENSSDUG00000004612) #20	hoxa10b (ENSSDUG00000004658) #22	hoxa11a (ENSSDUG00000004669) #21	ENSSDUG00000004714 #23	HOXA7 (ENSSDUG00000004723) #24	hoxa5a (ENSSDUG00000004737) #25	HOXA4 (ENSSDUG00000004757) #26	hoxa3a (ENSSDUG00000004765) #27	ENSSDUG00000004775 #28	hoxa1a (ENSSDUG00000004791) #29	snx10a (ENSSDUG00000004833) #30	cbx3a (ENSSDUG00000005004) #31	nfe2l3 (ENSSDUG00000005020) #32	ENSSDUG00000005032	ENSSDUG00000005049	ENSSDUG00000005062 #34	FKBP14 (ENSSDUG00000005096) #35
Barramundi perch	MODERN SPECIES	3	trappc3 (ENSLCAG00010016343) #7	smap2 (ENSLCAG00010016361) #9	rims3 (ENSLCAG00010016368) #10	nup42 (ENSLCAG00010016376) #11	ENSLCAG00010016392 #12	osbpl3a (ENSLCAG00010016439) #13	TRIL (ENSLCAG00010016586) #14	ENSLCAG00010016589 #15	jazf1a (ENSLCAG00010016593) #16	tax1bp1a (ENSLCAG00010016597) #17	ENSLCAG00010016602 #17	hibadha (ENSLCAG00010016611) #18	evx1 (ENSLCAG00010016651) #19	hoxa13a (ENSLCAG00010016654) #20	hoxa11a (ENSLCAG00010016655) #21	hoxa10b (ENSLCAG00010016658) #22	ENSLCAG00010016661 #23	HOXA7 (ENSLCAG00010016662) #24	hoxa5a (ENSLCAG00010016664) #25	HOXA4 (ENSLCAG00010016671) #26	hoxa3a (ENSLCAG00010016667) #27	ENSLCAG00010016673 #28	hoxa1a (ENSLCAG00010016677) #29	snx10a (ENSLCAG00010016683) #30	cbx3a (ENSLCAG00010016686) #31	nfe2l3 (ENSLCAG00010016699) #32	ENSLCAG00010016700	ENSLCAG00010016702	COLQ (ENSLCAG00010016703) #34	FKBP14 (ENSLCAG00010016709) #35	ENSLCAG00010016711 #36
Pleuronectoidei	ANCESTRAL SPECIES	15	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT01030000234992 #33	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Tongue sole	MODERN SPECIES	9	col8a2 (ENSCSEG00000014092)	trappc3 (ENSCSEG00000014099) #7	smap2 (ENSCSEG00000014107) #9	rims3 (ENSCSEG00000014116) #10	nup42 (ENSCSEG00000014125) #11	ENSCSEG00000014132 #12	osbpl3a (ENSCSEG00000014147) #13	TRIL (ENSCSEG00000014180) #14	ENSCSEG00000014203 #15	jazf1a (ENSCSEG00000014225) #16	tax1bp1a (ENSCSEG00000014240) #17	hibadha (ENSCSEG00000014257) #18	evx1 (ENSCSEG00000014267) #19	hoxa13a (ENSCSEG00000014281) #20	hoxa11a (ENSCSEG00000014288) #21	hoxa10b (ENSCSEG00000014301) #22	ENSCSEG00000014310 #23	HOXA7 (ENSCSEG00000014312) #24	hoxa5a (ENSCSEG00000014317) #25	HOXA4 (ENSCSEG00000014321) #26	hoxa3a (ENSCSEG00000014335) #27	ENSCSEG00000014339 #28	hoxa1a (ENSCSEG00000014346) #29	snx10a (ENSCSEG00000014353) #30	nfe2l3 (ENSCSEG00000014383) #32	ENSCSEG00000014403 #33	ENSCSEG00000014427	ENSCSEG00000014447 #34	FKBP14 (ENSCSEG00000014491) #35	ENSCSEG00000014506 #36	ENSCSEG00000014515 #37
Turbot	MODERN SPECIES	14	col28a1a (ENSSMAG00000017548)	c1galt1a (ENSSMAG00000017803)	sdhaf3 (ENSSMAG00000015796)	tac1 (ENSSMAG00000015770)	asns (ENSSMAG00000015700)	ENSSMAG00000015650 #12	ENSSMAG00000015524 #13	TRIL (ENSSMAG00000015515) #14	ENSSMAG00000015493 #15	jazf1a (ENSSMAG00000015469) #16	tax1bp1a (ENSSMAG00000015345) #17	hibadha (ENSSMAG00000015307) #18	ENSSMAG00000034628	hoxa13a (ENSSMAG00000015259) #20	hoxa11a (ENSSMAG00000015215) #21	ENSSMAG00000015206 #22	ENSSMAG00000015202 #23	HOXA7 (ENSSMAG00000015198) #24	hoxa5a (ENSSMAG00000015188) #25	HOXA4 (ENSSMAG00000021678) #26	HOXA3 (ENSSMAG00000015176) #27	ENSSMAG00000015164 #28	HOXA1 (ENSSMAG00000015134) #29	ENSSMAG00000015127	snx10a (ENSSMAG00000014876) #30	CBX3 (ENSSMAG00000014860) #31	nfe2l3 (ENSSMAG00000014852) #32	ENSSMAG00000014833 #33	ENSSMAG00000014822	ENSSMAG00000014800 #34	ENSSMAG00000014788 #35
Eupercaria	ANCESTRAL SPECIES	11	ENSGT00960000186902	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Tetraodontidae	ANCESTRAL SPECIES	20	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000156906.j.b	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37	ENSGT00390000004280
Fugu	MODERN SPECIES	3	ZNF385D (ENSTRUG00000018125)	smap2 (ENSTRUG00000018144) #9	rims3 (ENSTRUG00000018155) #10	nup42 (ENSTRUG00000023049) #11	ENSTRUG00000020598 #12	osbpl3a (ENSTRUG00000018171) #13	ENSTRUG00000018191	ENSTRUG00000027270 #15	ENSTRUG00000031997 #15	Jazf1a (ENSTRUG00000028050) #16	tax1bp1a (ENSTRUG00000027936) #17	hibadha (ENSTRUG00000023488) #18	Evx1 (ENSTRUG00000020143) #19	hoxa13a (ENSTRUG00000016010) #20	hoxa11a (ENSTRUG00000020015) #21	hoxa10b (ENSTRUG00000015981) #22	ENSTRUG00000015974 #23	hoxa5a (ENSTRUG00000018252) #25	hoxa3a (ENSTRUG00000022811) #27	HOXA4 (ENSTRUG00000023173) #26	ENSTRUG00000015941 #28	hoxa1a (ENSTRUG00000015937) #29	snx10a (ENSTRUG00000015910) #30	cbx3a (ENSTRUG00000015895) #31	nfe2l3 (ENSTRUG00000015857) #32	rfrp (ENSTRUG00000015852)	ENSTRUG00000024909	ENSTRUG00000015831 #34	FKBP14 (ENSTRUG00000021578) #35	ENSTRUG00000015805 #36	ENSTRUG00000020614 #37
Tetraodon	MODERN SPECIES	15	ENSTNIG00000009198	ZNF385D (ENSTNIG00000009199)	smap2 (ENSTNIG00000009200) #9	rims3 (ENSTNIG00000009201) #10	nup42 (ENSTNIG00000001691) #11	ENSTNIG00000000830 #12	osbpl3a (ENSTNIG00000009202) #13	ENSTNIG00000000262	ENSTNIG00000009203 #15	jazf1a (ENSTNIG00000009204) #16	tax1bp1a (ENSTNIG00000009205) #17	hibadha (ENSTNIG00000009206) #18	evx1 (ENSTNIG00000000875) #19	hoxa13a (ENSTNIG00000009207) #20	hoxa11a (ENSTNIG00000001767) #21	hoxa10b (ENSTNIG00000001766) #22	ENSTNIG00000001582 #23	hoxa5a (ENSTNIG00000001756) #25	HOXA4 (ENSTNIG00000001755) #26	hoxa3a (ENSTNIG00000001754) #27	ENSTNIG00000001753 #28	hoxa1a (ENSTNIG00000000977) #29	snx10a (ENSTNIG00000009208) #30	cbx3a (ENSTNIG00000001200) #31	nfe2l3 (ENSTNIG00000009209) #32	ENSTNIG00000009210 #34	FKBP14 (ENSTNIG00000009211) #35	oxnad1 (ENSTNIG00000009212)	ENSTNIG00000009213	dazl (ENSTNIG00000001115)	trappc3 (ENSTNIG00000009214) #7
Eupecaria_A	ANCESTRAL SPECIES	12	ENSGT00960000186902	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Ballan wrasse	MODERN SPECIES	172	col8a2 (ENSLBEG00000002403)	trappc3 (ENSLBEG00000002379) #7	ENSLBEG00000002371 #8	rims3 (ENSLBEG00000002336) #10	nup42 (ENSLBEG00000002319) #11	ENSLBEG00000002291 #12	osbpl3a (ENSLBEG00000002210) #13	TRIL (ENSLBEG00000002179) #14	ENSLBEG00000002154 #15	jazf1a (ENSLBEG00000002120) #16	tax1bp1a (ENSLBEG00000002045) #17	hibadha (ENSLBEG00000002000) #18	evx1 (ENSLBEG00000001985) #19	hoxa13a (ENSLBEG00000001862) #20	hoxa11a (ENSLBEG00000001844) #21	hoxa10b (ENSLBEG00000001831) #22	ENSLBEG00000001814 #23	HOXA7 (ENSLBEG00000001798) #24	hoxa5a (ENSLBEG00000001723) #25	HOXA4 (ENSLBEG00000001673) #26	hoxa3a (ENSLBEG00000001651) #27	ENSLBEG00000001637 #28	hoxa1a (ENSLBEG00000001584) #29
Eupecaria_B	ANCESTRAL SPECIES	12	ENSGT00960000186902	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Eupecaria_C	ANCESTRAL SPECIES	13	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	10	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Large yellow croaker	MODERN SPECIES	484	col8a2 (ENSLCRG00005008388)	trappc3 (ENSLCRG00005008389) #7	ENSLCRG00005008394 #8	rims3 (ENSLCRG00005008396) #10	nup42 (ENSLCRG00005008398) #11	ENSLCRG00005008401 #12	osbpl3a (ENSLCRG00005008414) #13	TRIL (ENSLCRG00005008796) #14	ENSLCRG00005008798 #15	jazf1a (ENSLCRG00005008799) #16	tax1bp1a (ENSLCRG00005008801) #17	hibadha (ENSLCRG00005008807) #18	evx1 (ENSLCRG00005008873) #19	hoxa13a (ENSLCRG00005008874) #20	hoxa11a (ENSLCRG00005008876) #21	ENSLCRG00005008877 #22	ENSLCRG00005008882 #23	HOXA7 (ENSLCRG00005008884) #24	hoxa5a (ENSLCRG00005008888) #25	HOXA4 (ENSLCRG00005008891) #26	hoxa3a (ENSLCRG00005008893) #27	ENSLCRG00005008895 #28	hoxa1a (ENSLCRG00005008896) #29	snx10a (ENSLCRG00005008897) #30	cbx3a (ENSLCRG00005008899) #31	nfe2l3 (ENSLCRG00005008904) #32	ENSLCRG00005008906	ENSLCRG00005008907	COLQ (ENSLCRG00005008908) #34	FKBP14 (ENSLCRG00005008910) #35	ENSLCRG00005008912 #36
European seabass	MODERN SPECIES	22	ENSDLAG00005019445	trappc3 (ENSDLAG00005019448) #7	ENSDLAG00005019451 #9	ENSDLAG00005033407 #10	ENSDLAG00005019459 #11	ENSDLAG00005019463 #12	ENSDLAG00005019468 #13	TRIL (ENSDLAG00005033461) #14	ENSDLAG00005019707 #15	jazf1a (ENSDLAG00005032768) #16	tax1bp1a (ENSDLAG00005019739) #17	hibadha (ENSDLAG00005019778) #18	evx1 (ENSDLAG00005032633) #19	hoxa13a (ENSDLAG00005019876) #20	hoxa11a (ENSDLAG00005019880) #21	ENSDLAG00005019887 #22	ENSDLAG00005033816 #23	HOXA7 (ENSDLAG00005032717) #24	HOXA4 (ENSDLAG00005027508) #26	hoxa3a (ENSDLAG00005026758) #27	hoxa1a (ENSDLAG00005019926) #29	SNX10 (ENSDLAG00005019932) #30	NFE2L3 (ENSDLAG00005028211) #32	ENSDLAG00005019969	ENSDLAG00005002300 #34	ENSDLAG00005030672 #35	ENSDLAG00005002367 #36	ENSDLAG00005002604 #37	oxnad1 (ENSDLAG00005002662)	ENSDLAG00005002699	dazl (ENSDLAG00005002759)
Gilthead seabream	MODERN SPECIES	17	col8a2 (ENSSAUG00010023183)	trappc3 (ENSSAUG00010023182) #7	smap2 (ENSSAUG00010023179) #9	rims3 (ENSSAUG00010023178) #10	nup42 (ENSSAUG00010023177) #11	ENSSAUG00010023175 #12	osbpl3a (ENSSAUG00010023135) #13	TRIL (ENSSAUG00010023131) #14	ENSSAUG00010023129 #15	jazf1a (ENSSAUG00010023128) #16	tax1bp1a (ENSSAUG00010023127) #17	hibadha (ENSSAUG00010023125) #18	evx1 (ENSSAUG00010023124) #19	hoxa13a (ENSSAUG00010023123) #20	hoxa11a (ENSSAUG00010023122) #21	hoxa10b (ENSSAUG00010023121) #22	ENSSAUG00010023119 #23	HOXA7 (ENSSAUG00010023118) #24	hoxa5a (ENSSAUG00010023117) #25	HOXA4 (ENSSAUG00010023116) #26	hoxa3a (ENSSAUG00010023115) #27	ENSSAUG00010023114 #28	hoxa1a (ENSSAUG00010023113) #29	snx10a (ENSSAUG00010023111) #30	cbx3a (ENSSAUG00010023110) #31	nfe2l3 (ENSSAUG00010023109) #32	ENSSAUG00010023108 #33	ENSSAUG00010023107	ENSSAUG00010023106 #34	FKBP14 (ENSSAUG00010023105) #35	ENSSAUG00010023104 #36
Perciformes	ANCESTRAL SPECIES	11	ENSGT00960000186902	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT01030000234992 #33	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Perciformes_a	ANCESTRAL SPECIES	14	ENSGT00960000186902	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT01030000234992 #33	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Pike perch	MODERN SPECIES	41	ENSSLUG00000009603	trappc3 (ENSSLUG00000009611) #7	smap2 (ENSSLUG00000009617) #9	rims3 (ENSSLUG00000009621) #10	ENSSLUG00000009628 #11	ENSSLUG00000009633 #12	osbpl3a (ENSSLUG00000009717) #13	TRIL (ENSSLUG00000010971) #14	ENSSLUG00000010975 #15	jazf1a (ENSSLUG00000010981) #16	tax1bp1a (ENSSLUG00000011017) #17	hibadha (ENSSLUG00000011037) #18	evx1 (ENSSLUG00000011184) #19	hoxa13a (ENSSLUG00000011191) #20	hoxa11a (ENSSLUG00000011196) #21	ENSSLUG00000011201 #22	ENSSLUG00000011207 #23	HOXA7 (ENSSLUG00000011211) #24	hoxa5a (ENSSLUG00000011216) #25	HOXA4 (ENSSLUG00000011218) #26	hoxa3a (ENSSLUG00000011219) #27	ENSSLUG00000011223 #28	hoxa1a (ENSSLUG00000011224) #29	snx10a (ENSSLUG00000011232) #30	cbx3a (ENSSLUG00000011259) #31	nfe2l3 (ENSSLUG00000011266) #32	ENSSLUG00000011269 #33	ENSSLUG00000011273	COLQ (ENSSLUG00000011276) #34	FKBP14 (ENSSLUG00000011283) #35	ENSSLUG00000011287 #36
Channel bull blenny	MODERN SPECIES	2	trappc3 (ENSCGOG00000001270) #7	ENSCGOG00000001310 #9	ENSCGOG00000001313	rims3 (ENSCGOG00000001316) #10	ENSCGOG00000001319 #11	ENSCGOG00000001326 #12	osbpl3a (ENSCGOG00000001403) #13	TRIL (ENSCGOG00000002306) #14	ENSCGOG00000002307 #15	jazf1a (ENSCGOG00000002320) #16	tax1bp1a (ENSCGOG00000002329) #17	hibadha (ENSCGOG00000002339) #18	evx1 (ENSCGOG00000002366) #19	hoxa13a (ENSCGOG00000002368) #20	hoxa11a (ENSCGOG00000002371) #21	hoxa10b (ENSCGOG00000002380) #22	ENSCGOG00000002392 #23	HOXA7 (ENSCGOG00000002396) #24	hoxa5a (ENSCGOG00000002402) #25	HOXA4 (ENSCGOG00000002403) #26	hoxa3a (ENSCGOG00000002407) #27	ENSCGOG00000002408 #28	hoxa1a (ENSCGOG00000002411) #29	snx10a (ENSCGOG00000002413) #30	cbx3a (ENSCGOG00000002431) #31	nfe2l3 (ENSCGOG00000002472) #32	ENSCGOG00000002473 #33	ENSCGOG00000002478	COLQ (ENSCGOG00000002481) #34	FKBP14 (ENSCGOG00000002494) #35	ENSCGOG00000002489 #36
Cottioidei	ANCESTRAL SPECIES	16	ENSGT00940000154317.a.a	ENSGT00390000003880.b.a #7	ENSGT00940000158387 #9	ENSGT00940000159332 #10	ENSGT00390000000118 #11	ENSGT00940000155880.f #12	ENSGT00940000155957.b #13	ENSGT00940000161975 #14	ENSGT00940000155261.b #15	ENSGT00390000003635.g #16	ENSGT00950000183025.b.a.ab #17	ENSGT00940000165581 #18	ENSGT00940000159854 #19	ENSGT00940000164071.b.b #20	ENSGT00940000158311.a #21	ENSGT00940000163268.d.a #22	ENSGT00940000166648 #23	ENSGT00940000161013 #24	ENSGT00940000159894 #25	ENSGT00940000158988.a.a #26	ENSGT00940000159522 #27	ENSGT00940000155029.c.a.f #28	ENSGT00940000157315 #29	ENSGT00940000156007.k #30	ENSGT00940000153305 #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271	ENSGT00940000157248.c.b #34	ENSGT00940000157858.j #35	ENSGT00940000160267 #36	ENSGT00760000119737 #37
Stickleback	MODERN SPECIES	9	col8a2 (ENSGACG00000007251)	trappc3 (ENSGACG00000007236) #7	smap2 (ENSGACG00000007231) #9	rims3 (ENSGACG00000007223) #10	nup42 (ENSGACG00000007219) #11	ENSGACG00000007216 #12	osbpl3a (ENSGACG00000007208) #13	TRIL (ENSGACG00000007203) #14	ENSGACG00000007196 #15	jazf1a (ENSGACG00000007192) #16	tax1bp1a (ENSGACG00000007180) #17	hibadha (ENSGACG00000007155) #18	evx1 (ENSGACG00000007148) #19	hoxa13a (ENSGACG00000007134) #20	hoxa11a (ENSGACG00000007132) #21	hoxa10b (ENSGACG00000007128) #22	ENSGACG00000007123 #23	HOXA7 (ENSGACG00000007112) #24	hoxa5a (ENSGACG00000007108) #25	HOXA4 (ENSGACG00000007100) #26	hoxa3a (ENSGACG00000007094) #27	ENSGACG00000007090 #28	hoxa1a (ENSGACG00000007085) #29	snx10a (ENSGACG00000007074) #30	cbx3a (ENSGACG00000007069) #31	nfe2l3 (ENSGACG00000007066) #32	cycsb (ENSGACG00000007058)	ENSGACG00000007049 #34	FKBP14 (ENSGACG00000007031) #35	ENSGACG00000007025 #36	ENSGACG00000007024 #37
Lumpfish	MODERN SPECIES	2	col8a2 (ENSCLMG00005020362)	trappc3 (ENSCLMG00005020361) #7	smap2 (ENSCLMG00005020360) #9	rims3 (ENSCLMG00005020359) #10	nup42 (ENSCLMG00005020358) #11	ENSCLMG00005020357 #12	osbpl3a (ENSCLMG00005020227) #13	TRIL (ENSCLMG00005020211) #14	ENSCLMG00005020208 #15	jazf1a (ENSCLMG00005020199) #16	tax1bp1a (ENSCLMG00005020195) #17	hibadha (ENSCLMG00005020131) #18	evx1 (ENSCLMG00005020130) #19	hoxa13a (ENSCLMG00005020129) #20	hoxa11a (ENSCLMG00005020127) #21	ENSCLMG00005020123 #22	ENSCLMG00005020119 #23	hoxa5a (ENSCLMG00005020117) #25	HOXA4 (ENSCLMG00005020116) #26	hoxa3a (ENSCLMG00005020115) #27	ENSCLMG00005020113 #28	hoxa1a (ENSCLMG00005020112) #29	snx10a (ENSCLMG00005020105) #30	cbx3a (ENSCLMG00005020104) #31	nfe2l3 (ENSCLMG00005020103) #32	ENSCLMG00005020102	ENSCLMG00005020101	ENSCLMG00005020100 #34	FKBP14 (ENSCLMG00005020097) #35	ENSCLMG00005020096 #36	ENSCLMG00005020092 #37