Tetrapoda	ANCESTRAL SPECIES	17	ENSGT00940000160392	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000162108 #14	ENSGT00950000183145.B.a.b	ENSGT00950000183145.B.a.a	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702 #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Amniota	ANCESTRAL SPECIES	10	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000154525.b.a #13	ENSGT00940000163882	ENSGT00950000183145.E	ENSGT00950000183145.D	ENSGT00940000164475	ENSGT00950000183145.A.b.a	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Mammalia	ANCESTRAL SPECIES	14	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000154525.b.a #13	ENSGT00940000163882	ENSGT00950000183145.E	ENSGT00950000183145.D	ENSGT00950000183145.A.b.a	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00940000165188	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00940000168868	ENSGT00940000164222
Theria	ANCESTRAL SPECIES	26	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000154525.b.a #13	ENSGT00940000162108 #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00950000183145.D	ENSGT00950000183145.C	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00940000168868	ENSGT00940000164222
Eutheria	ANCESTRAL SPECIES	13	ENSGT00940000163005	ENSGT00940000154525.b.a #13	ENSGT00940000165716	ENSGT00940000162108 #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00950000183145.D	ENSGT00950000183145.C	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00940000162108.sb.a ##14	ENSGT00940000162108.tb #14	ENSGT01010000224541	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00950000183145.D	ENSGT00950000183145.C	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00940000165716	ENSGT00940000162108.sb.b ##14	ENSGT00940000162108.sb.a ##14	ENSGT00940000162108.tb #14	ENSGT01010000224541	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044 #12	ENSGT00940000154525.b.a #13	ENSGT00940000165716	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Glires	ANCESTRAL SPECIES	16	ENSGT00940000164044 #12	ENSGT00940000171163	ENSGT00940000154525.b.a #13	ENSGT00940000165716	ENSGT00940000162108.tb #14	ENSGT01010000224541	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Rodentia	ANCESTRAL SPECIES	16	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.a ##12	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00950000183145.E	ENSGT00390000005511	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Sciuridae	ANCESTRAL SPECIES	21	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00950000183145.E	ENSGT00390000005511	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Marmotini	ANCESTRAL SPECIES	16	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00940000156955 #16	ENSGT00940000155157.k #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00390000000403 #37	ENSGT00940000162008
Marmotini_b	ANCESTRAL SPECIES	27	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00940000156955 #16	ENSGT00940000155157.k #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00940000168868	ENSGT00940000164222	ENSGT00730000111063 #36
Squirrel	MODERN SPECIES	86	HMX3 (ENSSTOG00000003981) #7	ACADSB (ENSSTOG00000006965) #8	IKZF5 (ENSSTOG00000028669) #9	PSTK (ENSSTOG00000006955) #10	ENSSTOG00000033040 #11	ENSSTOG00000030864 #12	CUZD1 (ENSSTOG00000008183) #13	ENSSTOG00000026812 #14	ENSSTOG00000034031 #15	HTRA1 (ENSSTOG00000026475) #16	ENSSTOG00000010191 #17	BTBD16 (ENSSTOG00000015270) #18	ENSSTOG00000022252 #19	NSMCE4A (ENSSTOG00000011112) #20	ATE1 (ENSSTOG00000027779) #21	FGFR2 (ENSSTOG00000003979) #22	WDR11 (ENSSTOG00000006935) #23	PLPP4 (ENSSTOG00000006962) #24	SEC23IP (ENSSTOG00000005178) #25	MCMBP (ENSSTOG00000005145) #26	INPP5F (ENSSTOG00000005115) #27	ENSSTOG00000032848 #28	BAG3 (ENSSTOG00000023267) #29	TIAL1 (ENSSTOG00000025095) #30	RGS10 (ENSSTOG00000004925) #31	GRK5 (ENSSTOG00000002553) #32	PRDX3 (ENSSTOG00000002537) #33	SFXN4 (ENSSTOG00000032860) #34	DENND10 (ENSSTOG00000020685) #35	EIF3A (ENSSTOG00000002512) #36	CACUL1 (ENSSTOG00000007083) #37
Arctic ground squirrel	MODERN SPECIES	28	PSTK (ENSUPAG00010004819) #10	ENSUPAG00010004823 #11	ENSUPAG00010004845 ##12	CUZD1 (ENSUPAG00010004852) #13	ENSUPAG00010004857	ENSUPAG00010004894 #15	ENSUPAG00010004901	HTRA1 (ENSUPAG00010004911) #16	ENSUPAG00010004924 #17	ENSUPAG00010004971	BTBD16 (ENSUPAG00010004978) #18	TACC2 (ENSUPAG00010005112) #19	NSMCE4A (ENSUPAG00010006240) #20	ENSUPAG00010006255	ATE1 (ENSUPAG00010006266) #21	FGFR2 (ENSUPAG00010006384) #22	WDR11 (ENSUPAG00010006463) #23	PLPP4 (ENSUPAG00010006532) #24	ENSUPAG00010006552	SEC23IP (ENSUPAG00010006554) #25	MCMBP (ENSUPAG00010006578) #26	INPP5F (ENSUPAG00010006608) #27	BAG3 (ENSUPAG00010006628) #29	TIAL1 (ENSUPAG00010006642) #30	RGS10 (ENSUPAG00010006669) #31	GRK5 (ENSUPAG00010006723) #32	PRDX3 (ENSUPAG00010006779) #33	SFXN4 (ENSUPAG00010006790) #34	ENSUPAG00010006798	ENSUPAG00010006801	EIF3A (ENSUPAG00010006808) #36
Alpin marmot	MODERN SPECIES	53	IKZF5 (ENSMMMG00000002033) #9	PSTK (ENSMMMG00000002014) #10	CUZD1 (ENSMMMG00000001993) #13	ENSMMMG00000001979 #14	ENSMMMG00000001938 #14	C10orf120 (ENSMMMG00000001925)	ENSMMMG00000001790	ENSMMMG00000001770 #16	ENSMMMG00000001757	ENSMMMG00000001679 #17	BTBD16 (ENSMMMG00000001579) #18	ENSMMMG00000001553 #19	ENSMMMG00000001271 #19	NSMCE4A (ENSMMMG00000001206) #20	ATE1 (ENSMMMG00000001092) #21	FGFR2 (ENSMMMG00000000986) #22	WDR11 (ENSMMMG00000000912) #23	ENSMMMG00000000896	ENSMMMG00000000883	PLPP4 (ENSMMMG00000000832) #24	SEC23IP (ENSMMMG00000000778) #25	MCMBP (ENSMMMG00000000744) #26	INPP5F (ENSMMMG00000000681) #27	BAG3 (ENSMMMG00000000616) #29	TIAL1 (ENSMMMG00000000560) #30	RGS10 (ENSMMMG00000000551) #31	GRK5 (ENSMMMG00000000513) #32	PRDX3 (ENSMMMG00000000500) #33	SFXN4 (ENSMMMG00000000466) #34	DENND10 (ENSMMMG00000000410) #35	EIF3A (ENSMMMG00000000325) #36
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005001055 #11	CUZD1 (ENSSVLG00005001077) #13	ENSSVLG00005001120 #14	ENSSVLG00005001198	ENSSVLG00005001252	HTRA1 (ENSSVLG00005001280) #16	PLEKHA1 (ENSSVLG00005001323) #17	ENSSVLG00005001346	BTBD16 (ENSSVLG00005001375) #18	ENSSVLG00005001566 #19	ENSSVLG00005001901 #19	ENSSVLG00005001936 #20	ENSSVLG00005001969	ATE1 (ENSSVLG00005002012) #21	ENSSVLG00005002095	FGFR2 (ENSSVLG00005002254) #22	WDR11 (ENSSVLG00005002429) #23	PLPP4 (ENSSVLG00005002461) #24	SEC23IP (ENSSVLG00005002496) #25	MCMBP (ENSSVLG00005002533) #26	INPP5F (ENSSVLG00005002590) #27	BAG3 (ENSSVLG00005002726) #29	ENSSVLG00005002763 #30	RGS10 (ENSSVLG00005002843) #31	GRK5 (ENSSVLG00005002880) #32	PRDX3 (ENSSVLG00005002921) #33	SFXN4 (ENSSVLG00005002960) #34	DENND10 (ENSSVLG00005003022) #35	EIF3A (ENSSVLG00005003063) #36	NANOS1 (ENSSVLG00005003114)	CACUL1 (ENSSVLG00005003130) #37
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Naked mole-rat female	MODERN SPECIES	4	ENSHGLG00000014383	ENSHGLG00000041620 #14	ENSHGLG00000045576	ENSHGLG00000014651	HTRA1 (ENSHGLG00000011897) #16	ENSHGLG00000009809 #17	ENSHGLG00000043818	BTBD16 (ENSHGLG00000010643) #18	ENSHGLG00000014774 #19	ENSHGLG00000035516 #19	NSMCE4A (ENSHGLG00000013057) #20	ENSHGLG00000018201 #21	ENSHGLG00000045128	ENSHGLG00000006514	ENSHGLG00000032507	ENSHGLG00000011201 #22	WDR11 (ENSHGLG00000010871) #23	ENSHGLG00000044013 #12	PLPP4 (ENSHGLG00000012927) #24	ENSHGLG00000045415	SEC23IP (ENSHGLG00000013752) #25	ENSHGLG00000011466 #26	INPP5F (ENSHGLG00000009930) #27	ENSHGLG00000042038	BAG3 (ENSHGLG00000013505) #29	ENSHGLG00000012192	TIAL1 (ENSHGLG00000013775) #30	ENSHGLG00000034213	RGS10 (ENSHGLG00000037265) #31	GRK5 (ENSHGLG00000050923) #32	ENSHGLG00000038210 #32
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035.e.a #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Guinea pig	MODERN SPECIES	1	BUB3 (ENSCPOG00000011957)	HMX2 (ENSCPOG00000032283)	HMX3 (ENSCPOG00000011950) #7	ACADSB (ENSCPOG00000012372) #8	ENSCPOG00000037527 #9	PSTK (ENSCPOG00000030265) #10	C10orf88 (ENSCPOG00000006675) #11	CUZD1 (ENSCPOG00000003649) #13	ENSCPOG00000001267 #14	HTRA1 (ENSCPOG00000000632) #16	PLEKHA1 (ENSCPOG00000000631) #17	BTBD16 (ENSCPOG00000000630) #18	ENSCPOG00000000626 #19	NSMCE4A (ENSCPOG00000000625) #20	ATE1 (ENSCPOG00000025966) #21	FGFR2 (ENSCPOG00000008833) #22	WDR11 (ENSCPOG00000014291) #23	PLPP4 (ENSCPOG00000012587) #24	SEC23IP (ENSCPOG00000004752) #25	MCMBP (ENSCPOG00000009028) #26	INPP5F (ENSCPOG00000009019) #27	BAG3 (ENSCPOG00000007549) #29	ENSCPOG00000006074	RGS10 (ENSCPOG00000004325) #31	GRK5 (ENSCPOG00000007453) #32	PRDX3 (ENSCPOG00000039588) #33	DENND10 (ENSCPOG00000015190) #35	EIF3A (ENSCPOG00000015188) #36	NANOS1 (ENSCPOG00000038609)	CACUL1 (ENSCPOG00000010902) #37	PRLHR (ENSCPOG00000007186)
Hystricomorpha_b	ANCESTRAL SPECIES	14	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035.e.a #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37	ENSGT00940000162008
Degu	MODERN SPECIES	51	ENSODEG00000017599 #9	PSTK (ENSODEG00000017417) #10	C10orf88 (ENSODEG00000017572) #11	CUZD1 (ENSODEG00000017550) #13	ENSODEG00000017380 #14	ENSODEG00000017508	ENSODEG00000017538	HTRA1 (ENSODEG00000017523) #16	ENSODEG00000017854 #17	ENSODEG00000017646	BTBD16 (ENSODEG00000017181) #18	ENSODEG00000017758 #19	NSMCE4A (ENSODEG00000017586) #20	ATE1 (ENSODEG00000017714) #21	ENSODEG00000017613	FGFR2 (ENSODEG00000017727) #22	ENSODEG00000017521	ENSODEG00000017729	WDR11 (ENSODEG00000017999) #23	ENSODEG00000017528	PLPP4 (ENSODEG00000017787) #24	ENSODEG00000017622	ENSODEG00000017620	ENSODEG00000020513	ENSODEG00000017568 #25	ENSODEG00000017627 #25	MCMBP (ENSODEG00000017666) #26	INPP5F (ENSODEG00000017771) #27	BAG3 (ENSODEG00000017665) #29	ENSODEG00000020474	TIAL1 (ENSODEG00000017741) #30
Long-tailed chinchilla	DUPLICATION
Long-tailed chinchilla	MODERN SPECIES	32																ENSCLAG00000000905 #22
Long-tailed chinchilla	MODERN SPECIES	258																ENSCLAG00000000970 #22	WDR11 (ENSCLAG00000001575) #23	PLPP4 (ENSCLAG00000001292) #24	ENSCLAG00000004266	SEC23IP (ENSCLAG00000003871) #25	MCMBP (ENSCLAG00000003713) #26	INPP5F (ENSCLAG00000002847) #27	BAG3 (ENSCLAG00000001524) #29	TIAL1 (ENSCLAG00000001273) #30	RGS10 (ENSCLAG00000001093) #31	GRK5 (ENSCLAG00000001870) #32
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.a ##12	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602.g.a #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Kangaroo rat	MODERN SPECIES	377	Hmx2 (ENSDORG00000028020)	Hmx3 (ENSDORG00000002862) #7	Acadsb (ENSDORG00000001496) #8	Ikzf5 (ENSDORG00000030138) #9	Pstk (ENSDORG00000011804) #10	2310057M21Rik (ENSDORG00000028211) #11	Fam24a (ENSDORG00000010469) ##12	Cuzd1 (ENSDORG00000007077) #13	ENSDORG00000007072 #14	Htra1 (ENSDORG00000015731) #16	Plekha1 (ENSDORG00000024017) #17	Btbd16 (ENSDORG00000005110) #18	ENSDORG00000003881 #19	Nsmce4a (ENSDORG00000003880) #20	Ate1 (ENSDORG00000011669) #21	Fgfr2 (ENSDORG00000005639) #22	Wdr11 (ENSDORG00000003077) #23	Plpp4 (ENSDORG00000002515) #24	ENSDORG00000008015 #25	ENSDORG00000027445 #25	Mcmbp (ENSDORG00000008011) #26	Inpp5f (ENSDORG00000003458) #27	Bag3 (ENSDORG00000011527) #29	Tial1 (ENSDORG00000010683) #30	Rgs10 (ENSDORG00000003521) #31	Grk5 (ENSDORG00000008496) #32	Prdx3 (ENSDORG00000004623) #33	Sfxn4 (ENSDORG00000004492) #34	Dennd10 (ENSDORG00000026703) #35	Eif3a (ENSDORG00000003481) #36	Nanos1 (ENSDORG00000029226)
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.a ##12	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602.g.a #25	ENSGT00940000156602.g.b #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Lesser Egyptian jerboa	MODERN SPECIES	70	ENSJJAG00000017926 #8	Ikzf5 (ENSJJAG00000000850) #9	Pstk (ENSJJAG00000021183) #10	2310057M21Rik (ENSJJAG00000022848) #11	Fam24a (ENSJJAG00000011583) ##12	ENSJJAG00000018148 #12	Cuzd1 (ENSJJAG00000022053) #13	ENSJJAG00000011591 #14	4933402N03Rik (ENSJJAG00000001575)	Htra1 (ENSJJAG00000012131) #16	Plekha1 (ENSJJAG00000019344) #17	Btbd16 (ENSJJAG00000012283) #18	ENSJJAG00000015501 #19	Nsmce4a (ENSJJAG00000020152) #20	Ate1 (ENSJJAG00000013127) #21	Fgfr2 (ENSJJAG00000012859) #22	Wdr11 (ENSJJAG00000014160) #23	Plpp4 (ENSJJAG00000022845) #24	ENSJJAG00000014744 #25	ENSJJAG00000021258 #25	Mcmbp (ENSJJAG00000022939) #26	Inpp5f (ENSJJAG00000020126) #27	ENSJJAG00000016414	ENSJJAG00000010122	Bag3 (ENSJJAG00000013499) #29	ENSJJAG00000005398 #30	ENSJJAG00000015632	Rgs10 (ENSJJAG00000010554) #31	Grk5 (ENSJJAG00000022251) #32	Prdx3 (ENSJJAG00000023489) #33	Sfxn4 (ENSJJAG00000009478) #34
Muroidea	ANCESTRAL SPECIES	1	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.a ##12	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602.g.a #25	ENSGT00940000156602.g.b #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	556	Acadsb (ENSNGAG00000003415) #8	Ikzf5 (ENSNGAG00000014976) #9	Pstk (ENSNGAG00000018855) #10	2310057M21Rik (ENSNGAG00000020488) #11	ENSNGAG00000000938 #12	ENSNGAG00000001948 #12	Cuzd1 (ENSNGAG00000005205) #13	ENSNGAG00000009762 #14	4933402N03Rik (ENSNGAG00000013572)	Htra1 (ENSNGAG00000014707) #16	Plekha1 (ENSNGAG00000016064) #17	Btbd16 (ENSNGAG00000019177) #18	ENSNGAG00000012564 #19	Nsmce4a (ENSNGAG00000009717) #20	Ate1 (ENSNGAG00000011904) #21	Fgfr2 (ENSNGAG00000017837) #22	Wdr11 (ENSNGAG00000001781) #23	Plpp4 (ENSNGAG00000018055) #24	ENSNGAG00000022208 #25	ENSNGAG00000022868 #25	Mcmbp (ENSNGAG00000001050) #26	Inpp5f (ENSNGAG00000016489) #27	Bag3 (ENSNGAG00000018737) #29	Tial1 (ENSNGAG00000020427) #30	Rgs10 (ENSNGAG00000022036) #31	Grk5 (ENSNGAG00000022629) #32	Prdx3 (ENSNGAG00000006625) #33	Sfxn4 (ENSNGAG00000016136) #34	Dennd10 (ENSNGAG00000017203) #35	Eif3a (ENSNGAG00000019550) #36	Nanos1 (ENSNGAG00000023539)
Muroidea_A	ANCESTRAL SPECIES		ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.a ##12	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602.g.a #25	ENSGT00940000156602.g.b #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00390000003648	ENSGT00390000000050	ENSGT00940000160533	ENSGT00940000160447	ENSGT00390000009109	ENSGT01100000263552.h.b
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00390000017384 #11	ENSGT00940000164044.a ##12	ENSGT00940000171163	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602.g.a #25	ENSGT00940000156602.g.b #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00390000003648	ENSGT00390000000050	ENSGT00940000160533	ENSGT00940000160447	ENSGT00390000009109	ENSGT01100000263552.h.b
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000171163	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602.g.a #25	ENSGT00940000156602.g.b #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00390000000050	ENSGT00940000160533	ENSGT00940000160447	ENSGT00390000009109	ENSGT00940000153104.f	ENSGT00940000162257
Golden Hamster	MODERN SPECIES	617	Hmx2 (ENSMAUG00000006087)	Hmx3 (ENSMAUG00000004458) #7	Acadsb (ENSMAUG00000005091) #8	Ikzf5 (ENSMAUG00000004882) #9	Pstk (ENSMAUG00000004534) #10	2310057M21Rik (ENSMAUG00000006383) #11	Cuzd1 (ENSMAUG00000005301) #13	ENSMAUG00000009283 #14	4933402N03Rik (ENSMAUG00000004597)	Htra1 (ENSMAUG00000006347) #16	Plekha1 (ENSMAUG00000008559) #17	Btbd16 (ENSMAUG00000006732) #18	ENSMAUG00000005429 #19	Nsmce4a (ENSMAUG00000004938) #20	Ate1 (ENSMAUG00000007472) #21	Fgfr2 (ENSMAUG00000012248) #22	Wdr11 (ENSMAUG00000008685) #23	Plpp4 (ENSMAUG00000006636) #24	ENSMAUG00000006177 #25	ENSMAUG00000005483 #25	ENSMAUG00000010608 #26	Inpp5f (ENSMAUG00000010345) #27	Bag3 (ENSMAUG00000010387) #29	ENSMAUG00000008932 #30	Rgs10 (ENSMAUG00000011265) #31	Rusf1 (ENSMAUG00000007110)	Slc5a2 (ENSMAUG00000009034)	Tgfb1i1 (ENSMAUG00000005956)	Armc5 (ENSMAUG00000006134)	Cox6a2 (ENSMAUG00000008662)	Itgad (ENSMAUG00000010022)
Chinese hamster chok1gshd	MODERN SPECIES	401	Acadsb (ENSCGRG00001013507) #8	Ikzf5 (ENSCGRG00001000240) #9	Pstk (ENSCGRG00001019704) #10	2310057M21Rik (ENSCGRG00001022004) #11	ENSCGRG00001010191	ENSCGRG00001021611 #12	Cuzd1 (ENSCGRG00001016877) #13	ENSCGRG00001005841 #14	4933402N03Rik (ENSCGRG00001021980)	Htra1 (ENSCGRG00001020772) #16	Plekha1 (ENSCGRG00001014871) #17	Btbd16 (ENSCGRG00001003604) #18	ENSCGRG00001021443 #19	Nsmce4a (ENSCGRG00001024552) #20	Ate1 (ENSCGRG00001015040) #21	Fgfr2 (ENSCGRG00001015969) #22	Wdr11 (ENSCGRG00001014792) #23	Plpp4 (ENSCGRG00001022754) #24	Sec23ip (ENSCGRG00001017822) #25	Mcmbp (ENSCGRG00001008541) #26	Inpp5f (ENSCGRG00001018515) #27	Bag3 (ENSCGRG00001013021) #29	Tial1 (ENSCGRG00001012762) #30	Rgs10 (ENSCGRG00001023110) #31	Rusf1 (ENSCGRG00001021809)	Slc5a2 (ENSCGRG00001017676)	Tgfb1i1 (ENSCGRG00001013242)	Armc5 (ENSCGRG00001019321)	ENSCGRG00001002394	Cox6a2 (ENSCGRG00001006668)	Itgad (ENSCGRG00001019849)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.a ##12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602.g.b #25	ENSGT00940000156602.g.a #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00390000003648	ENSGT00390000000050	ENSGT00940000160533	ENSGT00940000160447	ENSGT00390000009109	ENSGT01100000263552.h.b
Prairie vole	MODERN SPECIES	16	Hmx3 (ENSMOCG00000017634) #7	Acadsb (ENSMOCG00000014741) #8	Ikzf5 (ENSMOCG00000012731) #9	Pstk (ENSMOCG00000020657) #10	2310057M21Rik (ENSMOCG00000017003) #11	Cuzd1 (ENSMOCG00000019620) #13	ENSMOCG00000015698	ENSMOCG00000002270 #14	4933402N03Rik (ENSMOCG00000021499)	Htra1 (ENSMOCG00000022155) #16	Plekha1 (ENSMOCG00000017137) #17	Btbd16 (ENSMOCG00000019789) #18	ENSMOCG00000005035 #19	Nsmce4a (ENSMOCG00000010931) #20	Ate1 (ENSMOCG00000006090) #21	Fgfr2 (ENSMOCG00000017948) #22	Wdr11 (ENSMOCG00000017742) #23	Plpp4 (ENSMOCG00000012214) #24	ENSMOCG00000011869 #25	ENSMOCG00000019551 #25	Mcmbp (ENSMOCG00000019379) #26	Inpp5f (ENSMOCG00000015647) #27	Bag3 (ENSMOCG00000018609) #29	Tial1 (ENSMOCG00000014244) #30	Rgs10 (ENSMOCG00000011142) #31	Rusf1 (ENSMOCG00000021936)	ENSMOCG00000021793	Tgfb1i1 (ENSMOCG00000019509)	Armc5 (ENSMOCG00000019608)	Cox6a2 (ENSMOCG00000021087)	Itgad (ENSMOCG00000019558)
Northern American deer mouse	MODERN SPECIES		2310057M21Rik (ENSPEMG00000020879) #11	Fam24a (ENSPEMG00000031419) ##12	Cuzd1 (ENSPEMG00000022588) #13	Cdcp3 (ENSPEMG00000020751) #14	4933402N03Rik (ENSPEMG00000021538)	ENSPEMG00000024600	ENSPEMG00000028257	Htra1 (ENSPEMG00000022401) #16	Plekha1 (ENSPEMG00000021169) #17	Btbd16 (ENSPEMG00000021258) #18	ENSPEMG00000030243 #19	ENSPEMG00000009363 #19	Nsmce4a (ENSPEMG00000021690) #20	ENSPEMG00000025302	Ate1 (ENSPEMG00000022740) #21	Fgfr2 (ENSPEMG00000014436) #22	Wdr11 (ENSPEMG00000022330) #23	Plpp4 (ENSPEMG00000022713) #24	ENSPEMG00000025267	Sec23ip (ENSPEMG00000022060) #25	Mcmbp (ENSPEMG00000021598) #26	Inpp5f (ENSPEMG00000023406) #27	Bag3 (ENSPEMG00000016897) #29	Tial1 (ENSPEMG00000014538) #30	Rgs10 (ENSPEMG00000022501) #31	ENSPEMG00000025167	Rusf1 (ENSPEMG00000022677)	Slc5a2 (ENSPEMG00000024257)	Tgfb1i1 (ENSPEMG00000022910)	Armc5 (ENSPEMG00000008687)	9130023H24Rik (ENSPEMG00000013683)
Murinae	ANCESTRAL SPECIES		ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.a ##12	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602.g.a #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00390000003648	ENSGT00390000000050	ENSGT00940000160533	ENSGT00940000160447	ENSGT00390000009109	ENSGT01100000263552.h.b	ENSGT00940000162257
Rat	MODERN SPECIES		C1h10orf88 (ENSRNOG00000020597) #11	Fam24b (ENSRNOG00000026419) #12	RGD1559891 (ENSRNOG00000026440)	Cuzd1 (ENSRNOG00000029945) #13	Dmbt1l1 (ENSRNOG00000022737) #14	C1h10orf120 (ENSRNOG00000022900)	LOC100911413 (ENSRNOG00000034038)	Dmbt1 (ENSRNOG00000020560)	Htra1 (ENSRNOG00000020533) #16	Plekha1 (ENSRNOG00000020497) #17	Btbd16 (ENSRNOG00000036675) #18	Tacc2 (ENSRNOG00000020457) #19	Nsmce4a (ENSRNOG00000020452) #20	RGD1563285 (ENSRNOG00000069173)	Ate1 (ENSRNOG00000024414) #21	Fgfr2 (ENSRNOG00000016374) #22	LOC102555739 (ENSRNOG00000020446)	Wdr11 (ENSRNOG00000020430) #23	ENSRNOG00000066085	Plpp4 (ENSRNOG00000020424) #24	Sec23ip (ENSRNOG00000020411) #25	Mcmbp (ENSRNOG00000020394) #26	Inpp5f (ENSRNOG00000020388) #27	Bag3 (ENSRNOG00000020298) #29	Rps2-ps13 (ENSRNOG00000069056)	Tial1 (ENSRNOG00000020271) #30	Rgs10 (ENSRNOG00000042592) #31	Ahsp (ENSRNOG00000020165)	Rusf1 (ENSRNOG00000020144)	Slc5a2 (ENSRNOG00000020039)	Tgfb1i1 (ENSRNOG00000019965)
Mus	ANCESTRAL SPECIES		ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.a ##12	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602.g.a #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00390000003648	ENSGT00390000000050	ENSGT00940000160533	ENSGT00940000160447	ENSGT00390000009109	ENSGT01100000263552.h.b	ENSGT00940000162257
Shrew mouse	MODERN SPECIES		Acadsb (MGP_PahariEiJ_G0013777) #8	Ikzf5 (MGP_PahariEiJ_G0013776) #9	Pstk (MGP_PahariEiJ_G0013775) #10	2310057M21Rik (MGP_PahariEiJ_G0013774) #11	Fam24a (MGP_PahariEiJ_G0013773) ##12	Fam24b (MGP_PahariEiJ_G0013772) #12	Cuzd1 (MGP_PahariEiJ_G0013771) #13	MGP_PahariEiJ_G0013770 #14	4933402N03Rik (MGP_PahariEiJ_G0013769)	Htra1 (MGP_PahariEiJ_G0013768) #16	Plekha1 (MGP_PahariEiJ_G0013767) #17	Btbd16 (MGP_PahariEiJ_G0013766) #18	Tacc2 (MGP_PahariEiJ_G0013765) #19	Nsmce4a (MGP_PahariEiJ_G0013764) #20	Ate1 (MGP_PahariEiJ_G0013763) #21	Fgfr2 (MGP_PahariEiJ_G0013762) #22	Wdr11 (MGP_PahariEiJ_G0013761) #23	MGP_PahariEiJ_G0013760 #24	Sec23ip (MGP_PahariEiJ_G0013759) #25	Mcmbp (MGP_PahariEiJ_G0013758) #26	Inpp5f (MGP_PahariEiJ_G0013757) #27	Bag3 (MGP_PahariEiJ_G0013756) #29	Tial1 (MGP_PahariEiJ_G0013755) #30	Rgs10 (MGP_PahariEiJ_G0013754) #31	Rusf1 (MGP_PahariEiJ_G0013753)	Slc5a2 (MGP_PahariEiJ_G0013752)	MGP_PahariEiJ_G0013751	MGP_PahariEiJ_G0013750	Armc5 (MGP_PahariEiJ_G0013749)	9130023H24Rik (MGP_PahariEiJ_G0013748)	Cox6a2 (MGP_PahariEiJ_G0013747)
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.a ##12	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602.g.a #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00390000003648	ENSGT00390000000050	ENSGT00940000160533	ENSGT00940000160447.c	ENSGT00940000160447.d	ENSGT00390000009109	ENSGT01100000263552.h.b
Ryukyu mouse	MODERN SPECIES	16	Acadsb (MGP_CAROLIEiJ_G0030570) #8	Ikzf5 (MGP_CAROLIEiJ_G0030569) #9	Pstk (MGP_CAROLIEiJ_G0030568) #10	2310057M21Rik (MGP_CAROLIEiJ_G0030567) #11	Fam24a (MGP_CAROLIEiJ_G0030566) ##12	Fam24b (MGP_CAROLIEiJ_G0030565) #12	Cuzd1 (MGP_CAROLIEiJ_G0030564) #13	MGP_CAROLIEiJ_G0030563 #14	4933402N03Rik (MGP_CAROLIEiJ_G0030562)	Htra1 (MGP_CAROLIEiJ_G0030561) #16	MGP_CAROLIEiJ_G0030560 #17	Btbd16 (MGP_CAROLIEiJ_G0030559) #18	Tacc2 (MGP_CAROLIEiJ_G0030558) #19	Nsmce4a (MGP_CAROLIEiJ_G0030557) #20	Ate1 (MGP_CAROLIEiJ_G0030556) #21	Fgfr2 (MGP_CAROLIEiJ_G0030555) #22	Wdr11 (MGP_CAROLIEiJ_G0030554) #23	Plpp4 (MGP_CAROLIEiJ_G0030553) #24	Sec23ip (MGP_CAROLIEiJ_G0030552) #25	Mcmbp (MGP_CAROLIEiJ_G0030551) #26	Inpp5f (MGP_CAROLIEiJ_G0030550) #27	Bag3 (MGP_CAROLIEiJ_G0030549) #29	Tial1 (MGP_CAROLIEiJ_G0030548) #30	Rgs10 (MGP_CAROLIEiJ_G0030547) #31	Rusf1 (MGP_CAROLIEiJ_G0030546)	Slc5a2 (MGP_CAROLIEiJ_G0030545)	MGP_CAROLIEiJ_G0030544	MGP_CAROLIEiJ_G0030543	Armc5 (MGP_CAROLIEiJ_G0030542)	9130023H24Rik (MGP_CAROLIEiJ_G0030541)	Cox6a2 (MGP_CAROLIEiJ_G0030540)
Mus_B	ANCESTRAL SPECIES		ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.a ##12	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602.g.a #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00390000003648	ENSGT00390000000050	ENSGT00940000160533	ENSGT00940000160447.c	ENSGT00940000160447.d	ENSGT00390000009109	ENSGT01100000263552.h.b
Mouse	MODERN SPECIES	16	Ikzf5 (ENSMUSG00000040167) #9	Pstk (ENSMUSG00000063179) #10	2310057M21Rik (ENSMUSG00000040177) #11	Fam24a (ENSMUSG00000030859) ##12	Fam24b (ENSMUSG00000030858) #12	Cuzd1 (ENSMUSG00000040205) #13	Cdcp3 (ENSMUSG00000006204) #14	4933402N03Rik (ENSMUSG00000013668)	Dmbt1 (ENSMUSG00000047517)	Htra1 (ENSMUSG00000006205) #16	Plekha1 (ENSMUSG00000040268) #17	Btbd16 (ENSMUSG00000040298) #18	Tacc2 (ENSMUSG00000030852) #19	Nsmce4a (ENSMUSG00000040331) #20	Ate1 (ENSMUSG00000030850) #21	Fgfr2 (ENSMUSG00000030849) #22	Wdr11 (ENSMUSG00000042055) #23	Plpp4 (ENSMUSG00000070366) #24	Sec23ip (ENSMUSG00000055319) #25	Mcmbp (ENSMUSG00000048170) #26	Inpp5f (ENSMUSG00000042105) #27	Bag3 (ENSMUSG00000030847) #29	Tial1 (ENSMUSG00000030846) #30	Rgs10 (ENSMUSG00000030844) #31	Rusf1 (ENSMUSG00000030780)	Slc5a2 (ENSMUSG00000030781)	Tgfb1i1 (ENSMUSG00000030782)	Armc5 (ENSMUSG00000042178)	9130023H24Rik (ENSMUSG00000062944)	Cox6a2 (ENSMUSG00000030785)	Itgad (ENSMUSG00000070369)
Mus_C	ANCESTRAL SPECIES	14	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000164044.a ##12	ENSGT00940000164044.b #12	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602.g.a #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00390000003648	ENSGT00390000000050	ENSGT00940000160533	ENSGT00940000160447.c	ENSGT00940000160447.d	ENSGT00390000009109	ENSGT01100000263552.h.b
Steppe mouse	MODERN SPECIES	3190									Htra1 (ENSMSIG00000009092) #16	ENSMSIG00000008942 #17	Btbd16 (ENSMSIG00000008853) #18	Tacc2 (ENSMSIG00000008632) #19	Nsmce4a (ENSMSIG00000008558) #20	ENSMSIG00000008533	Ate1 (ENSMSIG00000008300) #21	Fgfr2 (ENSMSIG00000007996) #22	Wdr11 (ENSMSIG00000007834) #23	ENSMSIG00000007803	Plpp4 (ENSMSIG00000007743) #24	ENSMSIG00000007730	Sec23ip (ENSMSIG00000007682) #25	Mcmbp (ENSMSIG00000007578) #26	ENSMSIG00000007565	Inpp5f (ENSMSIG00000007462) #27	ENSMSIG00000007441
spretus	MODERN SPECIES	16	Acadsb (MGP_SPRETEiJ_G0031684) #8	Ikzf5 (MGP_SPRETEiJ_G0031683) #9	Pstk (MGP_SPRETEiJ_G0031682) #10	2310057M21Rik (MGP_SPRETEiJ_G0031681) #11	Fam24a (MGP_SPRETEiJ_G0031680) ##12	Fam24b (MGP_SPRETEiJ_G0031679) #12	Cuzd1 (MGP_SPRETEiJ_G0031678) #13	MGP_SPRETEiJ_G0031677 #14	4933402N03Rik (MGP_SPRETEiJ_G0031676)	Htra1 (MGP_SPRETEiJ_G0031675) #16	Plekha1 (MGP_SPRETEiJ_G0031674) #17	Btbd16 (MGP_SPRETEiJ_G0031673) #18	Tacc2 (MGP_SPRETEiJ_G0031672) #19	Nsmce4a (MGP_SPRETEiJ_G0031671) #20	Ate1 (MGP_SPRETEiJ_G0031670) #21	Fgfr2 (MGP_SPRETEiJ_G0031669) #22	Wdr11 (MGP_SPRETEiJ_G0031668) #23	Plpp4 (MGP_SPRETEiJ_G0031667) #24	Sec23ip (MGP_SPRETEiJ_G0031666) #25	Mcmbp (MGP_SPRETEiJ_G0031665) #26	Inpp5f (MGP_SPRETEiJ_G0031664) #27	Bag3 (MGP_SPRETEiJ_G0031663) #29	Tial1 (MGP_SPRETEiJ_G0031662) #30	Rgs10 (MGP_SPRETEiJ_G0031661) #31	Rusf1 (MGP_SPRETEiJ_G0031660)	Slc5a2 (MGP_SPRETEiJ_G0031659)	MGP_SPRETEiJ_G0031658	MGP_SPRETEiJ_G0031657	Armc5 (MGP_SPRETEiJ_G0031656)	9130023H24Rik (MGP_SPRETEiJ_G0031655)	Cox6a2 (MGP_SPRETEiJ_G0031654)
Lagomorpha	ANCESTRAL SPECIES	17									ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00390000000403 #37	ENSGT00940000162008
Pika	MODERN SPECIES	2257															ATE1 (ENSOPRG00000002291) #21	FGFR2 (ENSOPRG00000002252) #22
Rabbit	MODERN SPECIES	9	ENSOCUG00000023927	ENSOCUG00000026878	ENSOCUG00000016735	ENSOCUG00000007271	CYP2E1 (ENSOCUG00000007724)	C10orf120 (ENSOCUG00000006564)	ENSOCUG00000032261	ENSOCUG00000013488	HTRA1 (ENSOCUG00000013478) #16	PLEKHA1 (ENSOCUG00000002100) #17	BTBD16 (ENSOCUG00000000825) #18	ENSOCUG00000000821 #19	ENSOCUG00000026111 #19	NSMCE4A (ENSOCUG00000000820) #20	ATE1 (ENSOCUG00000003373) #21	FGFR2 (ENSOCUG00000007069) #22	ENSOCUG00000001764	WDR11 (ENSOCUG00000013912) #23	ENSOCUG00000017933 #24	SEC23IP (ENSOCUG00000003141) #25	MCMBP (ENSOCUG00000002235) #26	INPP5F (ENSOCUG00000002226) #27	BAG3 (ENSOCUG00000011696) #29	TIAL1 (ENSOCUG00000003783) #30	RGS10 (ENSOCUG00000014618) #31	ENSOCUG00000035399 #32	ENSOCUG00000036390 #32	ENSOCUG00000017334 #33	SFXN4 (ENSOCUG00000005006) #34	DENND10 (ENSOCUG00000005001) #35	EIF3A (ENSOCUG00000004996) #36
Tree shrew	MODERN SPECIES	8022																FGFR2 (ENSTBEG00000014396) #22
Primates	ANCESTRAL SPECIES	16	ENSGT00940000154525.b.a #13	ENSGT00940000162108.sb.b ##14	ENSGT00940000162108.sb.a ##14	ENSGT00940000162108.tb #14	ENSGT01010000224541	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00940000154525.b.a #13	ENSGT00940000162108.sb.b ##14	ENSGT00940000162108.sb.a ##14	ENSGT00940000162108.tb #14	ENSGT01010000224541	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Bushbaby	MODERN SPECIES	136							ENSOGAG00000033009	HTRA1 (ENSOGAG00000010043) #16	ENSOGAG00000010036 #17	ENSOGAG00000026108	BTBD16 (ENSOGAG00000010035) #18	TACC2 (ENSOGAG00000010030) #19	NSMCE4A (ENSOGAG00000010026) #20	ENSOGAG00000031150	ATE1 (ENSOGAG00000010023) #21	FGFR2 (ENSOGAG00000012206) #22	WDR11 (ENSOGAG00000012465) #23	PLPP4 (ENSOGAG00000016998) #24	SEC23IP (ENSOGAG00000004948) #25	MCMBP (ENSOGAG00000009714) #26	INPP5F (ENSOGAG00000009706) #27	BAG3 (ENSOGAG00000011421) #29	ENSOGAG00000011419	TIAL1 (ENSOGAG00000011417) #30	RGS10 (ENSOGAG00000030571) #31	GRK5 (ENSOGAG00000002075) #32	ENSOGAG00000002074 #33	ENSOGAG00000027987	DENND10 (ENSOGAG00000002070) #35	EIF3A (ENSOGAG00000004580) #36	NANOS1 (ENSOGAG00000033947)
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00940000154525.b.a #13	ENSGT00940000162108.sb.b ##14	ENSGT00940000162108.sb.a ##14	ENSGT00940000162108.tb #14	ENSGT01010000224541	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Mouse lemur	MODERN SPECIES	6	IKZF5 (ENSMICG00000043450) #9	PSTK (ENSMICG00000005140) #10	ENSMICG00000015190 #11	ENSMICG00000008610	ENSMICG00000035025 #11	CUZD1 (ENSMICG00000044009) #13	C10orf120 (ENSMICG00000008567)	ENSMICG00000037150	ENSMICG00000037650	HTRA1 (ENSMICG00000009867) #16	PLEKHA1 (ENSMICG00000037532) #17	BTBD16 (ENSMICG00000009849) #18	TACC2 (ENSMICG00000009830) #19	NSMCE4A (ENSMICG00000042455) #20	ATE1 (ENSMICG00000009823) #21	FGFR2 (ENSMICG00000000424) #22	WDR11 (ENSMICG00000008892) #23	PLPP4 (ENSMICG00000008887) #24	ENSMICG00000037953	SEC23IP (ENSMICG00000007551) #25	MCMBP (ENSMICG00000007540) #26	INPP5F (ENSMICG00000007525) #27	BAG3 (ENSMICG00000027251) #29	TIAL1 (ENSMICG00000037857) #30	ENSMICG00000005524	GRK5 (ENSMICG00000007635) #32	PRDX3 (ENSMICG00000007627) #33	SFXN4 (ENSMICG00000007614) #34	DENND10 (ENSMICG00000026438) #35	EIF3A (ENSMICG00000007588) #36	CACUL1 (ENSMICG00000007500) #37
Lemuriformes_a	ANCESTRAL SPECIES	42	ENSGT00940000154525.b.a #13	ENSGT00940000162108.sb.b ##14	ENSGT00940000162108.sb.a ##14	ENSGT00940000162108.tb #14	ENSGT01010000224541	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Greater bamboo lemur	MODERN SPECIES	193	ENSPSMG00000008017 ##14	ENSPSMG00000008149 #14	ENSPSMG00000008209	C10orf120 (ENSPSMG00000008229)	SPADH (ENSPSMG00000008250)	ENSPSMG00000008256	ENSPSMG00000008270	HTRA1 (ENSPSMG00000008292) #16	PLEKHA1 (ENSPSMG00000008359) #17	BTBD16 (ENSPSMG00000008410) #18	ENSPSMG00000008723 #19	ENSPSMG00000008933 #19	NSMCE4A (ENSPSMG00000008948) #20	ENSPSMG00000008956	ATE1 (ENSPSMG00000009100) #21	FGFR2 (ENSPSMG00000009785) #22	WDR11 (ENSPSMG00000010687) #23	PLPP4 (ENSPSMG00000010705) #24	SEC23IP (ENSPSMG00000010732) #25	MCMBP (ENSPSMG00000010773) #26	INPP5F (ENSPSMG00000010892) #27	BAG3 (ENSPSMG00000010989) #29	TIAL1 (ENSPSMG00000011113) #30	ENSPSMG00000011218	GRK5 (ENSPSMG00000011313) #32	PRDX3 (ENSPSMG00000011358) #33	SFXN4 (ENSPSMG00000011378) #34	DENND10 (ENSPSMG00000011392) #35	EIF3A (ENSPSMG00000011410) #36	NANOS1 (ENSPSMG00000011420)
Coquerels sifaka	MODERN SPECIES	258	HMX3 (ENSPCOG00000004827) #7	ACADSB (ENSPCOG00000017961) #8	IKZF5 (ENSPCOG00000024918) #9	PSTK (ENSPCOG00000015070) #10	ENSPCOG00000018262 #11	ENSPCOG00000008575	CUZD1 (ENSPCOG00000026175) #13	C10orf120 (ENSPCOG00000020092)	ENSPCOG00000015298	HTRA1 (ENSPCOG00000021590) #16	PLEKHA1 (ENSPCOG00000027097) #17	BTBD16 (ENSPCOG00000020204) #18	ENSPCOG00000026897 #19	NSMCE4A (ENSPCOG00000011420) #20	ATE1 (ENSPCOG00000026224) #21	FGFR2 (ENSPCOG00000027873) #22	WDR11 (ENSPCOG00000019354) #23	PLPP4 (ENSPCOG00000025706) #24	MCMBP (ENSPCOG00000020444) #26	INPP5F (ENSPCOG00000015152) #27	BAG3 (ENSPCOG00000027192) #29	TIAL1 (ENSPCOG00000018990) #30	RGS10 (ENSPCOG00000020094) #31	GRK5 (ENSPCOG00000022845) #32	PRDX3 (ENSPCOG00000024919) #33	SFXN4 (ENSPCOG00000027384) #34	DENND10 (ENSPCOG00000000559) #35	EIF3A (ENSPCOG00000026400) #36	NANOS1 (ENSPCOG00000009467)	CACUL1 (ENSPCOG00000020700) #37	FAM204A (ENSPCOG00000022324)
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000163005	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Simiiformes	ANCESTRAL SPECIES	17	ENSGT00940000163005.c	ENSGT00390000017384.h #11	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00650000095054	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00440000033468.c.b	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000154259.k.a	ENSGT00940000159204 #29	ENSGT00500000044913.b	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00910000148293	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33	ENSGT01030000234641.a.b #34
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00940000163005.c	ENSGT00390000017384.h #11	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00650000095054	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00440000033468.c.b	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000154259.k.a	ENSGT00940000159204 #29	ENSGT00500000044913.b	ENSGT00940000160482 #30	ENSGT00910000147084	ENSGT00940000161426 #31	ENSGT00910000148293	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00390000017384.g #11	ENSGT00940000163005.c	ENSGT00390000017384.h #11	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00650000095054	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000154259.k.a	ENSGT00940000159204 #29	ENSGT00500000044913.b	ENSGT00940000160482 #30	ENSGT00910000147084	ENSGT00940000161426 #31	ENSGT00910000148293	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33	ENSGT01030000234641.a.b #34
Gibbon	MODERN SPECIES	18	PSTK (ENSNLEG00000029733) #10	C10orf88 (ENSNLEG00000017047) #11	FAM24A (ENSNLEG00000017045)	ENSNLEG00000017042 #11	FAM24B (ENSNLEG00000028659)	CUZD1 (ENSNLEG00000017027) #13	C10orf120 (ENSNLEG00000017025)	ENSNLEG00000017018	HTRA1 (ENSNLEG00000017001) #16	ARMS2 (ENSNLEG00000016999)	PLEKHA1 (ENSNLEG00000016991) #17	BTBD16 (ENSNLEG00000016981) #18	TACC2 (ENSNLEG00000016926) #19	NSMCE4A (ENSNLEG00000016919) #20	ATE1 (ENSNLEG00000016908) #21	FGFR2 (ENSNLEG00000016854) #22	WDR11 (ENSNLEG00000016815) #23	PLPP4 (ENSNLEG00000028427) #24	SEC23IP (ENSNLEG00000016780) #25	MCMBP (ENSNLEG00000016770) #26	INPP5F (ENSNLEG00000016753) #27	ENSNLEG00000029480	BAG3 (ENSNLEG00000016750) #29	TIAL1 (ENSNLEG00000016743) #30	RGS10 (ENSNLEG00000035071) #31	GRK5 (ENSNLEG00000016723) #32	PRDX3 (ENSNLEG00000035268) #33	SFXN4 (ENSNLEG00000016685) #34	DENND10 (ENSNLEG00000032443) #35	EIF3A (ENSNLEG00000016648) #36	CACUL1 (ENSNLEG00000033485) #37
Hominidae	ANCESTRAL SPECIES	13	ENSGT00390000017384.g #11	ENSGT00940000163005.c	ENSGT00390000017384.h #11	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00650000095054	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000154259.k.a	ENSGT00940000159204 #29	ENSGT00500000044913.b	ENSGT00940000160482 #30	ENSGT00910000147084	ENSGT00940000161426 #31	ENSGT00910000148293	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33	ENSGT01030000234641.a.b #34
Orangutan	MODERN SPECIES	1	PSTK (ENSPPYG00000002726) #10	C10orf88 (ENSPPYG00000002725) #11	FAM24A (ENSPPYG00000002724)	ENSPPYG00000037859 #11	ENSPPYG00000030182	CUZD1 (ENSPPYG00000002722) #13	C10orf120 (ENSPPYG00000002719)	SPADH (ENSPPYG00000002718)	ENSPPYG00000002717	HTRA1 (ENSPPYG00000002716) #16	PLEKHA1 (ENSPPYG00000002715) #17	BTBD16 (ENSPPYG00000002714) #18	TACC2 (ENSPPYG00000002713) #19	NSMCE4A (ENSPPYG00000002712) #20	ATE1 (ENSPPYG00000002711) #21	FGFR2 (ENSPPYG00000002710) #22	WDR11 (ENSPPYG00000029859) #23	PLPP4 (ENSPPYG00000002709) #24	ENSPPYG00000030022	SEC23IP (ENSPPYG00000002708) #25	MCMBP (ENSPPYG00000002707) #26	INPP5F (ENSPPYG00000002706) #27	ENSPPYG00000031900	BAG3 (ENSPPYG00000002705) #29	TIAL1 (ENSPPYG00000002703) #30	ENSPPYG00000037360	ENSPPYG00000002702 #31	ENSPPYG00000036653	GRK5 (ENSPPYG00000002701) #32	PRDX3 (ENSPPYG00000002700) #33	SFXN4 (ENSPPYG00000002699) #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00390000017384.g #11	ENSGT00940000163005.c	ENSGT00390000017384.h #11	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00650000095054	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000154259.k.a	ENSGT00940000159204 #29	ENSGT00500000044913.b	ENSGT00940000160482 #30	ENSGT00910000147084	ENSGT00940000161426 #31	ENSGT00910000148293	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33	ENSGT01030000234641.a.b #34
Gorilla	MODERN SPECIES	1	IKZF5 (ENSGGOG00000003823) #9	PSTK (ENSGGOG00000003866) #10	C10orf88 (ENSGGOG00000007191) #11	FAM24A (ENSGGOG00000007194)	ENSGGOG00000006191 #11	FAM24B (ENSGGOG00000007190)	CUZD1 (ENSGGOG00000007184) #13	C10orf120 (ENSGGOG00000026034)	HTRA1 (ENSGGOG00000004853) #16	ARMS2 (ENSGGOG00000037501)	PLEKHA1 (ENSGGOG00000005120) #17	BTBD16 (ENSGGOG00000004960) #18	TACC2 (ENSGGOG00000004946) #19	ENSGGOG00000010663 #20	ATE1 (ENSGGOG00000008233) #21	FGFR2 (ENSGGOG00000008336) #22	ENSGGOG00000024510	WDR11 (ENSGGOG00000003069) #23	ENSGGOG00000011322 #24	ENSGGOG00000025941	SEC23IP (ENSGGOG00000003921) #25	MCMBP (ENSGGOG00000006006) #26	INPP5F (ENSGGOG00000005991) #27	ENSGGOG00000022627	BAG3 (ENSGGOG00000011503) #29	ENSGGOG00000024741	TIAL1 (ENSGGOG00000001816) #30	ENSGGOG00000041190	RGS10 (ENSGGOG00000008414) #31	ENSGGOG00000042904	GRK5 (ENSGGOG00000011618) #32
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00390000017384.g #11	ENSGT00940000163005.c	ENSGT00390000017384.h #11	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00650000095054	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000154259.k.a	ENSGT00940000159204 #29	ENSGT00500000044913.b	ENSGT00940000160482 #30	ENSGT00910000147084	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35
Pan	ANCESTRAL SPECIES	16	ENSGT00390000017554 #10	ENSGT00390000017384.g #11	ENSGT00940000163005.c	ENSGT00390000017384.h #11	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00650000095054	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000154259.k.a	ENSGT00940000159204 #29	ENSGT00500000044913.b	ENSGT00940000160482 #30	ENSGT00910000147084	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35
Bonobo	MODERN SPECIES	1	PSTK (ENSPPAG00000030978) #10	C10orf88 (ENSPPAG00000040286) #11	FAM24A (ENSPPAG00000029503)	ENSPPAG00000026413 #11	FAM24B (ENSPPAG00000030186)	CUZD1 (ENSPPAG00000038806) #13	C10orf120 (ENSPPAG00000027128)	DMBT1 (ENSPPAG00000029246)	HTRA1 (ENSPPAG00000000055) #16	ARMS2 (ENSPPAG00000041770)	PLEKHA1 (ENSPPAG00000003709) #17	BTBD16 (ENSPPAG00000042790) #18	TACC2 (ENSPPAG00000038587) #19	ENSPPAG00000035638 #20	ATE1 (ENSPPAG00000039734) #21	FGFR2 (ENSPPAG00000034123) #22	WDR11 (ENSPPAG00000034753) #23	PLPP4 (ENSPPAG00000040406) #24	ENSPPAG00000035383	SEC23IP (ENSPPAG00000021343) #25	MCMBP (ENSPPAG00000041372) #26	INPP5F (ENSPPAG00000028448) #27	ENSPPAG00000030508	BAG3 (ENSPPAG00000042723) #29	ENSPPAG00000036209	TIAL1 (ENSPPAG00000043098) #30	RGS10 (ENSPPAG00000028477) #31	GRK5 (ENSPPAG00000028552) #32	PRDX3 (ENSPPAG00000029603) #33	SFXN4 (ENSPPAG00000035782) #34	DENND10 (ENSPPAG00000027869) #35
Chimpanzee	MODERN SPECIES	1	PSTK (ENSPTRG00000003018) #10	C10H10orf88 (ENSPTRG00000003017) #11	FAM24A (ENSPTRG00000029673)	ENSPTRG00000048474 #11	FAM24B (ENSPTRG00000034300)	CUZD1 (ENSPTRG00000003015) #13	C10H10orf120 (ENSPTRG00000003012)	DMBT1 (ENSPTRG00000022758)	HTRA1 (ENSPTRG00000003011) #16	ARMS2 (ENSPTRG00000051999)	PLEKHA1 (ENSPTRG00000003010) #17	BTBD16 (ENSPTRG00000003009) #18	TACC2 (ENSPTRG00000003008) #19	NSMCE4A (ENSPTRG00000003006) #20	ATE1 (ENSPTRG00000003005) #21	FGFR2 (ENSPTRG00000003003) #22	WDR11 (ENSPTRG00000003004) #23	PLPP4 (ENSPTRG00000029684) #24	ENSPTRG00000048120	SEC23IP (ENSPTRG00000003001) #25	MCMBP (ENSPTRG00000003000) #26	INPP5F (ENSPTRG00000022873) #27	ENSPTRG00000051748	BAG3 (ENSPTRG00000002998) #29	ENSPTRG00000040193	ENSPTRG00000046181	TIAL1 (ENSPTRG00000002996) #30	RGS10 (ENSPTRG00000002995) #31	GRK5 (ENSPTRG00000002993) #32	PRDX3 (ENSPTRG00000002992) #33	SFXN4 (ENSPTRG00000002990) #34
Human	MODERN SPECIES	1	PSTK (ENSG00000179988) #10	C10orf88 (ENSG00000119965) #11	FAM24A (ENSG00000203795)	FAM24B (ENSG00000213185)	CUZD1 (ENSG00000138161) #13	C10orf120 (ENSG00000183559)	SPADH (ENSG00000286135)	DMBT1 (ENSG00000187908)	HTRA1 (ENSG00000166033) #16	ARMS2 (ENSG00000254636)	PLEKHA1 (ENSG00000107679) #17	BTBD16 (ENSG00000138152) #18	TACC2 (ENSG00000138162) #19	NSMCE4A (ENSG00000107672) #20	ATE1 (ENSG00000107669) #21	FGFR2 (ENSG00000066468) #22	WDR11 (ENSG00000120008) #23	PLPP4 (ENSG00000203805) #24	SEC23IP (ENSG00000107651) #25	MCMBP (ENSG00000197771) #26	INPP5F (ENSG00000198825) #27	BAG3 (ENSG00000151929) #29	TIAL1 (ENSG00000151923) #30	RGS10 (ENSG00000148908) #31	GRK5 (ENSG00000198873) #32	PRDX3 (ENSG00000165672) #33	SFXN4 (ENSG00000183605) #34	DENND10 (ENSG00000119979) #35	EIF3A (ENSG00000107581) #36	NANOS1 (ENSG00000188613)	CACUL1 (ENSG00000151893) #37
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00390000017384.g #11	ENSGT00940000163005.c	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00650000095054	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000154259.k.a	ENSGT00940000159204 #29	ENSGT00500000044913.b	ENSGT00940000160482 #30	ENSGT00910000147084	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35
Rhinopithecus	ANCESTRAL SPECIES	34	ENSGT00390000017554 #10	ENSGT00910000148049	ENSGT00390000017384.g #11	ENSGT00940000163005.c	ENSGT00390000017384.h #11	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.a.a #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000154259.k.a	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00910000147084	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36
Black snub-nosed monkey	MODERN SPECIES	403								ENSRBIG00000044070	HTRA1 (ENSRBIG00000037080) #16	PLEKHA1 (ENSRBIG00000033706) #17	BTBD16 (ENSRBIG00000032916) #18	TACC2 (ENSRBIG00000029332) #19	NSMCE4A (ENSRBIG00000032411) #20	ATE1 (ENSRBIG00000039407) #21	ENSRBIG00000037682	FGFR2 (ENSRBIG00000028118) #22	WDR11 (ENSRBIG00000030219) #23	PLPP4 (ENSRBIG00000028012) #24	SEC23IP (ENSRBIG00000016638) #25	MCMBP (ENSRBIG00000043184) #26	INPP5F (ENSRBIG00000029982) #27	MALSU1 (ENSRBIG00000043513)	IGF2BP3 (ENSRBIG00000033008)	TRA2A (ENSRBIG00000036805)	ENSRBIG00000031561	ENSRBIG00000002128	ENSRBIG00000033573	ENSRBIG00000039238	CCDC126 (ENSRBIG00000033086)	STK31 (ENSRBIG00000029403)
Golden snub-nosed monkey	MODERN SPECIES	2224													NSMCE4A (ENSRROG00000035053) #20	ENSRROG00000037354 #21	ENSRROG00000045511	FGFR2 (ENSRROG00000032645) #22
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00390000017384.g #11	ENSGT00940000163005.c	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00650000095054	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000154259.k.a	ENSGT00940000159204 #29	ENSGT00500000044913.b	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36
Vervet Monkey	MODERN SPECIES	28	ACADSB (ENSCSAG00000004557) #8	IKZF5 (ENSCSAG00000004558) #9	PSTK (ENSCSAG00000004563) #10	C10orf88 (ENSCSAG00000004568) #11	FAM24A (ENSCSAG00000004571)	FAM24B (ENSCSAG00000004575)	CUZD1 (ENSCSAG00000004585) #13	C10orf120 (ENSCSAG00000004594)	ENSCSAG00000004600	HTRA1 (ENSCSAG00000004604) #16	PLEKHA1 (ENSCSAG00000004609) #17	BTBD16 (ENSCSAG00000004617) #18	TACC2 (ENSCSAG00000004625) #19	NSMCE4A (ENSCSAG00000004638) #20	ATE1 (ENSCSAG00000004660) #21	FGFR2 (ENSCSAG00000004685) #22	WDR11 (ENSCSAG00000004694) #23	PLPP4 (ENSCSAG00000004702) #24	SEC23IP (ENSCSAG00000004713) #25	MCMBP (ENSCSAG00000004719) #26	INPP5F (ENSCSAG00000004724) #27	BAG3 (ENSCSAG00000004728) #29	TIAL1 (ENSCSAG00000004734) #30	RGS10 (ENSCSAG00000004742) #31	GRK5 (ENSCSAG00000004748) #32	PRDX3 (ENSCSAG00000004753) #33	SFXN4 (ENSCSAG00000004756) #34	ENSCSAG00000004768 #35	EIF3A (ENSCSAG00000004777) #36	CACUL1 (ENSCSAG00000004782) #37	FAM204A (ENSCSAG00000004787)
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00390000017384.g #11	ENSGT00940000163005.c	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00650000095054	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000154259.k.a	ENSGT00940000159204 #29	ENSGT00500000044913.b	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36
Macaca	ANCESTRAL SPECIES	11	ENSGT00390000017384.g #11	ENSGT00940000163005.c	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00650000095054	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00500000044913.b	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Pig-tailed macaque	MODERN SPECIES	92	PSTK (ENSMNEG00000029291) #10	ENSMNEG00000032659	C10orf88 (ENSMNEG00000033455) #11	FAM24A (ENSMNEG00000039220)	FAM24B (ENSMNEG00000032458)	CUZD1 (ENSMNEG00000033847) #13	C10orf120 (ENSMNEG00000032555)	ENSMNEG00000035126	HTRA1 (ENSMNEG00000039398) #16	ARMS2 (ENSMNEG00000037085)	PLEKHA1 (ENSMNEG00000042304) #17	BTBD16 (ENSMNEG00000043402) #18	TACC2 (ENSMNEG00000035162) #19	NSMCE4A (ENSMNEG00000029721) #20	ATE1 (ENSMNEG00000039140) #21	FGFR2 (ENSMNEG00000040871) #22	WDR11 (ENSMNEG00000036981) #23
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00390000017384.g #11	ENSGT00940000163005.c	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.b.b.b.a.b.a.b.b.a	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000161627.a.a.a.b.b.b.a.a.a.a.c.a	ENSGT00390000012433.a.a.a.a.b	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36
Rhesus	MODERN SPECIES	19	PSTK (ENSMMUG00000017858) #10	C9H10orf88 (ENSMMUG00000008564) #11	FAM24A (ENSMMUG00000057705)	CUZD1 (ENSMMUG00000010458) #13	C9H10orf120 (ENSMMUG00000021140)	SPADH (ENSMMUG00000052634)	ENSMMUG00000021138	ENSMMUG00000065343	HTRA1 (ENSMMUG00000056637) #16	PLEKHA1 (ENSMMUG00000013040) #17	BTBD16 (ENSMMUG00000013038) #18	TACC2 (ENSMMUG00000013033) #19	NSMCE4A (ENSMMUG00000012044) #20	ATE1 (ENSMMUG00000021594) #21	ENSMMUG00000059094	FGFR2 (ENSMMUG00000009594) #22	WDR11 (ENSMMUG00000001118) #23	ENSMMUG00000064557	ENSMMUG00000064321	PLPP4 (ENSMMUG00000008724) #24	SEC23IP (ENSMMUG00000009561) #25	ENSMMUG00000065302	MCMBP (ENSMMUG00000009559) #26	INPP5F (ENSMMUG00000009558) #27	BAG3 (ENSMMUG00000000798) #29	ENSMMUG00000049613	ENSMMUG00000051594	TIAL1 (ENSMMUG00000001472) #30	ENSMMUG00000054942	RGS10 (ENSMMUG00000021610) #31	GRK5 (ENSMMUG00000004596) #32
Crab-eating macaque	MODERN SPECIES	19	FAM24A (ENSMFAG00000060945)	FAM24B (ENSMFAG00000061971)	CUZD1 (ENSMFAG00000033660) #13	ENSMFAG00000046495 #14	C10orf120 (ENSMFAG00000041530)	SPADH (ENSMFAG00000049536)	DMBT1 (ENSMFAG00000003903)	ENSMFAG00000062863	HTRA1 (ENSMFAG00000044439) #16	PLEKHA1 (ENSMFAG00000041484) #17	BTBD16 (ENSMFAG00000002237) #18	TACC2 (ENSMFAG00000037369) #19	NSMCE4A (ENSMFAG00000000251) #20	ATE1 (ENSMFAG00000043722) #21	ENSMFAG00000063455	FGFR2 (ENSMFAG00000045752) #22	ENSMFAG00000051354	WDR11 (ENSMFAG00000031615) #23	ENSMFAG00000065246	ENSMFAG00000062414	ENSMFAG00000037481 #24	SEC23IP (ENSMFAG00000042549) #25	MCMBP (ENSMFAG00000000064) #26	INPP5F (ENSMFAG00000042323) #27	BAG3 (ENSMFAG00000035851) #29	ENSMFAG00000050052	ENSMFAG00000063730	TIAL1 (ENSMFAG00000002789) #30	ENSMFAG00000049112	ENSMFAG00000047317	RGS10 (ENSMFAG00000035933) #31
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384.g #11	ENSGT00940000163005.c	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00650000095054	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000154259.k.a	ENSGT00940000159204 #29	ENSGT00940000173066	ENSGT00500000044913.b	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35
Olive baboon	MODERN SPECIES	2	IKZF5 (ENSPANG00000020471) #9	PSTK (ENSPANG00000020470) #10	C10orf88 (ENSPANG00000020468) #11	FAM24A (ENSPANG00000020495)	CUZD1 (ENSPANG00000020487) #13	C10orf120 (ENSPANG00000046689)	SPADH (ENSPANG00000044363)	ENSPANG00000037364	ENSPANG00000020483	HTRA1 (ENSPANG00000020482) #16	PLEKHA1 (ENSPANG00000020481) #17	BTBD16 (ENSPANG00000020479) #18	TACC2 (ENSPANG00000020477) #19	NSMCE4A (ENSPANG00000020473) #20	ATE1 (ENSPANG00000020496) #21	FGFR2 (ENSPANG00000020505) #22	ENSPANG00000044749	ENSPANG00000038420	WDR11 (ENSPANG00000020499) #23	PLPP4 (ENSPANG00000020515) #24	SEC23IP (ENSPANG00000020516) #25	MCMBP (ENSPANG00000020524) #26	INPP5F (ENSPANG00000020522) #27	BAG3 (ENSPANG00000020521) #29	TIAL1 (ENSPANG00000020518) #30	RGS10 (ENSPANG00000020561) #31	GRK5 (ENSPANG00000020570) #32	ENSPANG00000048950 #33	SFXN4 (ENSPANG00000020612) #34	DENND10 (ENSPANG00000020611) #35	EIF3A (ENSPANG00000020615) #36
Cercopithecinae_d	ANCESTRAL SPECIES	64	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384.g #11	ENSGT00940000163005.c	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00650000095054	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000154259.k.a	ENSGT00940000159204 #29	ENSGT00940000173066	ENSGT00500000044913.b	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35
Sooty mangabey	MODERN SPECIES	527	IKZF5 (ENSCATG00000035777) #9	PSTK (ENSCATG00000038639) #10	C10orf88 (ENSCATG00000038112) #11	FAM24A (ENSCATG00000037982)	FAM24B (ENSCATG00000043992)	ENSCATG00000036116	C10orf120 (ENSCATG00000033658)	DMBT1 (ENSCATG00000044187)	HTRA1 (ENSCATG00000038268) #16	ARMS2 (ENSCATG00000026311)	PLEKHA1 (ENSCATG00000005094) #17	BTBD16 (ENSCATG00000012464) #18	TACC2 (ENSCATG00000000364) #19	NSMCE4A (ENSCATG00000037970) #20	ATE1 (ENSCATG00000039070) #21	FGFR2 (ENSCATG00000037271) #22	WDR11 (ENSCATG00000043471) #23	PLPP4 (ENSCATG00000008532) #24	ENSCATG00000039059	SEC23IP (ENSCATG00000031879) #25	MCMBP (ENSCATG00000035237) #26	INPP5F (ENSCATG00000016832) #27	ENSCATG00000036096	BAG3 (ENSCATG00000043521) #29	ENSCATG00000042161	TIAL1 (ENSCATG00000043838) #30	RGS10 (ENSCATG00000032717) #31	GRK5 (ENSCATG00000025277) #32	PRDX3 (ENSCATG00000041288) #33	SFXN4 (ENSCATG00000038203) #34	DENND10 (ENSCATG00000044731) #35
Drill	MODERN SPECIES	1373									HTRA1 (ENSMLEG00000028778) #16	ARMS2 (ENSMLEG00000028887)	PLEKHA1 (ENSMLEG00000036811) #17	BTBD16 (ENSMLEG00000042190) #18	TACC2 (ENSMLEG00000044190) #19	NSMCE4A (ENSMLEG00000024885) #20	ATE1 (ENSMLEG00000029782) #21	FGFR2 (ENSMLEG00000027189) #22	WDR11 (ENSMLEG00000041010) #23	PLPP4 (ENSMLEG00000039049) #24	SEC23IP (ENSMLEG00000030208) #25	MCMBP (ENSMLEG00000037646) #26	INPP5F (ENSMLEG00000008038) #27	BAG3 (ENSMLEG00000040350) #29	ENSMLEG00000042707	ENSMLEG00000036021	TIAL1 (ENSMLEG00000034719) #30	RGS10 (ENSMLEG00000028058) #31	GRK5 (ENSMLEG00000015118) #32	PRDX3 (ENSMLEG00000038508) #33	SFXN4 (ENSMLEG00000044253) #34	DENND10 (ENSMLEG00000025579) #35	EIF3A (ENSMLEG00000032044) #36
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00940000163005.c	ENSGT00390000017384.h #11	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00650000095054	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000154259.k.a.a	ENSGT00940000159204 #29	ENSGT00500000044913.b	ENSGT00940000160482 #30	ENSGT00910000147084	ENSGT00910000148125	ENSGT00940000161426 #31	ENSGT00910000148293	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33
Mas night monkey	MODERN SPECIES	802	C10orf88 (ENSANAG00000020459) #11	FAM24A (ENSANAG00000014047)	ENSANAG00000018257 #11	FAM24B (ENSANAG00000020828)	CUZD1 (ENSANAG00000021440) #13	C10orf120 (ENSANAG00000027570)	ENSANAG00000030579	HTRA1 (ENSANAG00000023219) #16	ARMS2 (ENSANAG00000024354)	PLEKHA1 (ENSANAG00000026667) #17	BTBD16 (ENSANAG00000028604) #18	TACC2 (ENSANAG00000035884) #19	NSMCE4A (ENSANAG00000021849) #20	ATE1 (ENSANAG00000036713) #21	ENSANAG00000017137	FGFR2 (ENSANAG00000030066) #22	WDR11 (ENSANAG00000034731) #23	PLPP4 (ENSANAG00000013394) #24
Cebidae	ANCESTRAL SPECIES	17	ENSGT00390000017554 #10	ENSGT00390000017384.g #11	ENSGT00940000163005.c	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000154259.k.a.a	ENSGT00940000159204 #29	ENSGT00500000044913.b	ENSGT00940000160482 #30	ENSGT00910000147084	ENSGT00910000148125	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33	ENSGT01030000234641.a.b #34
Marmoset	MODERN SPECIES	3	PSTK (ENSCJAG00000001117) #10	C10orf88 (ENSCJAG00000001125) #11	FAM24A (ENSCJAG00000086502)	FAM24B (ENSCJAG00000077353)	CUZD1 (ENSCJAG00000001132) #13	ENSCJAG00000061021 #14	C10orf120 (ENSCJAG00000012735)	SPADH (ENSCJAG00000067245)	ENSCJAG00000001157	ENSCJAG00000082859	HTRA1 (ENSCJAG00000001226) #16	ENSCJAG00000001251 #17	BTBD16 (ENSCJAG00000001276) #18	TACC2 (ENSCJAG00000001289) #19	ATE1 (ENSCJAG00000001411) #21	FGFR2 (ENSCJAG00000001438) #22	ENSCJAG00000074755	ENSCJAG00000081690	WDR11 (ENSCJAG00000006430) #23	ENSCJAG00000071848	PLPP4 (ENSCJAG00000006402) #24	ENSCJAG00000013460	ENSCJAG00000087246	BAG3 (ENSCJAG00000020374) #29	ENSCJAG00000020378	INPP5F (ENSCJAG00000020379) #27	MCMBP (ENSCJAG00000020390) #26	SEC23IP (ENSCJAG00000019189) #25	ENSCJAG00000086412	ENSCJAG00000069509	ENSCJAG00000059975
Cebidae_a	ANCESTRAL SPECIES	13	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384.g #11	ENSGT00940000163005.c	ENSGT00940000163005.d	ENSGT00940000154525.b.a #13	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926.b #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00500000044913.b	ENSGT00940000160482 #30	ENSGT00910000147084	ENSGT00910000148125	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.r #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35
Bolivian squirrel monkey	MODERN SPECIES	47	ACADSB (ENSSBOG00000026062) #8	IKZF5 (ENSSBOG00000021900) #9	PSTK (ENSSBOG00000035695) #10	C10orf88 (ENSSBOG00000030071) #11	FAM24A (ENSSBOG00000031885)	FAM24B (ENSSBOG00000034235)	CUZD1 (ENSSBOG00000019778) #13	C10orf120 (ENSSBOG00000021674)	ENSSBOG00000033598	HTRA1 (ENSSBOG00000022966) #16	PLEKHA1 (ENSSBOG00000032388) #17	BTBD16 (ENSSBOG00000030401) #18	TACC2 (ENSSBOG00000034773) #19	NSMCE4A (ENSSBOG00000034475) #20	ATE1 (ENSSBOG00000033557) #21	FGFR2 (ENSSBOG00000016345) #22	WDR11 (ENSSBOG00000034391) #23	PLPP4 (ENSSBOG00000027942) #24	ENSSBOG00000028957	SEC23IP (ENSSBOG00000028088) #25	MCMBP (ENSSBOG00000029485) #26	INPP5F (ENSSBOG00000034456) #27	BAG3 (ENSSBOG00000033183) #29	TIAL1 (ENSSBOG00000028408) #30	ENSSBOG00000028139	RGS10 (ENSSBOG00000023795) #31	GRK5 (ENSSBOG00000025587) #32	ENSSBOG00000034959	PRDX3 (ENSSBOG00000033406) #33	SFXN4 (ENSSBOG00000036043) #34	DENND10 (ENSSBOG00000019475) #35
Capuchin	MODERN SPECIES	396											PLEKHA1 (ENSCCAG00000026152) #17	BTBD16 (ENSCCAG00000036281) #18	TACC2 (ENSCCAG00000028861) #19	NSMCE4A (ENSCCAG00000037714) #20	ATE1 (ENSCCAG00000028520) #21	FGFR2 (ENSCCAG00000028642) #22	WDR11 (ENSCCAG00000024726) #23	PLPP4 (ENSCCAG00000035818) #24	CYB5R2 (ENSCCAG00000036771)	PPFIBP2 (ENSCCAG00000036318)
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	2088																ENSTSYG00000010400 #22
Tarsier	MODERN SPECIES	5755																ENSTSYG00000035045 #22
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00940000162108.sb.b ##14	ENSGT00940000162108.sb.a ##14	ENSGT00940000162108.tb #14	ENSGT01010000224541	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00950000183145.D	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00940000162108.sb.b ##14	ENSGT00940000162108.sb.a ##14	ENSGT00940000162108.tb #14	ENSGT01010000224541	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00950000183145.D	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT00390000017384 #11	ENSGT00940000163005.b	ENSGT00940000154525.b.a #13	ENSGT00940000165716	ENSGT00940000162108.tb #14	ENSGT00940000163882	ENSGT00950000183145.E	ENSGT00390000005511	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00390000017384 #11	ENSGT00940000163005.b	ENSGT00940000154525.b.a #13	ENSGT00940000165716	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Chiroptera	DUPLICATION
Chiroptera	ANCESTRAL SPECIES																	ENSGT00940000155447.q #22
Microchiroptera	ANCESTRAL SPECIES																	ENSGT00940000155447.q #22
Microbat	MODERN SPECIES	516															ENSMLUG00000027977 #22	ENSMLUG00000026200 #22
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00940000163005.a	ENSGT00390000017384 #11	ENSGT00940000163005.b	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00940000163882	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447.r #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Megabat	MODERN SPECIES	7791																FGFR2 (ENSPVAG00000000720) #22
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00940000163882	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447.r #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Microbat	MODERN SPECIES	516																ENSMLUG00000027977 #22	ENSMLUG00000026200 #22
Greater horseshoe bat	MODERN SPECIES	7	IKZF5 (ENSRFEG00010009357) #9	PSTK (ENSRFEG00010009389) #10	ENSRFEG00010009483 #11	ENSRFEG00010009592 #11	CUZD1 (ENSRFEG00010009612) #13	ENSRFEG00010009653 #14	C10orf120 (ENSRFEG00010009794)	ENSRFEG00010009865	HTRA1 (ENSRFEG00010010004) #16	PLEKHA1 (ENSRFEG00010010055) #17	BTBD16 (ENSRFEG00010010148) #18	TACC2 (ENSRFEG00010010381) #19	NSMCE4A (ENSRFEG00010010935) #20	ENSRFEG00010010986	ATE1 (ENSRFEG00010011030) #21	FGFR2 (ENSRFEG00010011408) #22	WDR11 (ENSRFEG00010011888) #23	PLPP4 (ENSRFEG00010011968) #24	SEC23IP (ENSRFEG00010012086) #25	MCMBP (ENSRFEG00010012192) #26	INPP5F (ENSRFEG00010012275) #27	BAG3 (ENSRFEG00010012499) #29	TIAL1 (ENSRFEG00010012554) #30	RGS10 (ENSRFEG00010012645) #31	GRK5 (ENSRFEG00010012799) #32	PRDX3 (ENSRFEG00010012853) #33	SFXN4 (ENSRFEG00010012886) #34	DENND10 (ENSRFEG00010013102) #35	EIF3A (ENSRFEG00010013169) #36	NANOS1 (ENSRFEG00010013284)	CACUL1 (ENSRFEG00010013309) #37
Equus	ANCESTRAL SPECIES	9	ENSGT00940000163005.b.a	ENSGT00940000154525.b.a #13	ENSGT00940000165716	ENSGT00940000162108.tb #14	ENSGT00950000183145.E	ENSGT00390000005511	ENSGT00390000012112.f	ENSGT00390000012112.e	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Donkey	MODERN SPECIES	11	ENSEASG00005032296	ENSEASG00005013472 #14	ENSEASG00005037253	C10orf120 (ENSEASG00005033462)	ENSEASG00005024831	ENSEASG00005035091	ENSEASG00005034128	ENSEASG00005014371	ENSEASG00005014375 #16	PLEKHA1 (ENSEASG00005014376) #17	BTBD16 (ENSEASG00005037072) #18	TACC2 (ENSEASG00005014393) #19	NSMCE4A (ENSEASG00005014412) #20	ENSEASG00005014414	ATE1 (ENSEASG00005014421) #21	FGFR2 (ENSEASG00005014428) #22	WDR11 (ENSEASG00005014435) #23	PLPP4 (ENSEASG00005014441) #24	SEC23IP (ENSEASG00005014443) #25	MCMBP (ENSEASG00005014444) #26	ENSEASG00005038260	INPP5F (ENSEASG00005014445) #27	BAG3 (ENSEASG00005014448) #29	TIAL1 (ENSEASG00005014449) #30	RGS10 (ENSEASG00005038309) #31	GRK5 (ENSEASG00005014452) #32	ENSEASG00005036811	ENSEASG00005014455 #33	SFXN4 (ENSEASG00005014456) #34	DENND10 (ENSEASG00005014457) #35	EIF3A (ENSEASG00005014459) #36
Horse	MODERN SPECIES		CUZD1 (ENSECAG00000014944) #13	ENSECAG00000014886	ENSECAG00000019510 #14	ENSECAG00000009186	C1H10orf120 (ENSECAG00000002143)	ENSECAG00000046082	ENSECAG00000006313	ENSECAG00000060192	ENSECAG00000009596	HTRA1 (ENSECAG00000009990) #16	PLEKHA1 (ENSECAG00000014908) #17	TACC2 (ENSECAG00000018280) #19	BTBD16 (ENSECAG00000008814) #18	NSMCE4A (ENSECAG00000016651) #20	ATE1 (ENSECAG00000012383) #21	FGFR2 (ENSECAG00000013960) #22	WDR11 (ENSECAG00000019673) #23	PLPP4 (ENSECAG00000023526) #24	SEC23IP (ENSECAG00000000536) #25	MCMBP (ENSECAG00000015061) #26	INPP5F (ENSECAG00000014941) #27	ENSECAG00000032636	TIAL1 (ENSECAG00000009970) #30	RGS10 (ENSECAG00000023632) #31	GRK5 (ENSECAG00000023764) #32	ENSECAG00000035538	PRDX3 (ENSECAG00000017026) #33	SFXN4 (ENSECAG00000012309) #34	DENND10 (ENSECAG00000013713) #35	EIF3A (ENSECAG00000021880) #36	NANOS1 (ENSECAG00000003656)
Carnivora	ANCESTRAL SPECIES	16	ENSGT00940000163005.b	ENSGT00940000154525.b.a #13	ENSGT00940000162108.sb.b ##14	ENSGT00940000162108.tb #14	ENSGT01010000224541	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00950000183145.D	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Caniformia	ANCESTRAL SPECIES	13	ENSGT00940000163005.b	ENSGT00940000154525.b.a #13	ENSGT00940000162108.sb.b ##14	ENSGT00940000162108.tb #14	ENSGT01010000224541	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00950000183145.D	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Canidae	ANCESTRAL SPECIES	16	ENSGT00390000017384.hb.f #11	ENSGT00940000163005.b	ENSGT00940000154525.b.a #13	ENSGT00940000162108.sb.b ##14	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00950000183145.D	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000163657	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.n #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Canis_lupus	ANCESTRAL SPECIES	20	ENSGT00940000154525.b.a #13	ENSGT00940000162108.sb.b ##14	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00950000183145.E.lb	ENSGT00950000183145.B.a.b	ENSGT00950000183145.E.kb.a	ENSGT00950000183145.E.kb.b	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000163657.f	ENSGT00390000004380.e.a.a	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.n #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36
Dingo	MODERN SPECIES	165	ENSCAFG00020015189 ##14	ENSCAFG00020015187 #14	ENSCAFG00020015184 #14	C10orf120 (ENSCAFG00020015180)	ENSCAFG00020015171	ENSCAFG00020015167	ENSCAFG00020015160	ENSCAFG00020015148	HTRA1 (ENSCAFG00020015096) #16	PLEKHA1 (ENSCAFG00020015085) #17	BTBD16 (ENSCAFG00020015057) #18	TACC2 (ENSCAFG00020014827) #19	ENSCAFG00020014819 #20	ENSCAFG00020014813	ATE1 (ENSCAFG00020014791) #21	FGFR2 (ENSCAFG00020014779) #22	WDR11 (ENSCAFG00020014683) #23	PLPP4 (ENSCAFG00020014668) #24	ENSCAFG00020014666	ENSCAFG00020014663	SEC23IP (ENSCAFG00020014659) #25	MCMBP (ENSCAFG00020014655) #26	INPP5F (ENSCAFG00020013935) #27	BAG3 (ENSCAFG00020013893) #29	TIAL1 (ENSCAFG00020013891) #30	RGS10 (ENSCAFG00020013888) #31	GRK5 (ENSCAFG00020013877) #32	ENSCAFG00020013867 #33	SFXN4 (ENSCAFG00020013859) #34	DENND10 (ENSCAFG00020013848) #35	EIF3A (ENSCAFG00020013841) #36
Dog	MODERN SPECIES	20	ENSCAFG00845024159 #11	ENSCAFG00845024126	CUZD1 (ENSCAFG00845024055) #13	ENSCAFG00845023783 #14	C10orf120 (ENSCAFG00845023695)	ENSCAFG00845023643	ENSCAFG00845023612	ENSCAFG00845022418	HTRA1 (ENSCAFG00845022222) #16	PLEKHA1 (ENSCAFG00845022104) #17	BTBD16 (ENSCAFG00845021873) #18	TACC2 (ENSCAFG00845020783) #19	NSMCE4A (ENSCAFG00845020544) #20	ATE1OS (ENSCAFG00845020507)	ATE1 (ENSCAFG00845020272) #21	FGFR2 (ENSCAFG00845019372) #22	WDR11 (ENSCAFG00845018912) #23	PLPP4 (ENSCAFG00845018703) #24	ENSCAFG00845018618	ENSCAFG00845018569	SEC23IP (ENSCAFG00845018243) #25	MCMBP (ENSCAFG00845017945) #26	SEC23IP (ENSCAFG00845017286) #27	BAG3 (ENSCAFG00845016933) #29	TIAL1 (ENSCAFG00845016533) #30	RGS10 (ENSCAFG00845016371) #31	GRK5 (ENSCAFG00845016167) #32	PRDX3 (ENSCAFG00845016072) #33	SFXN4 (ENSCAFG00845015969) #34	DENND10 (ENSCAFG00845015834) #35	EIF3A (ENSCAFG00845015674) #36
Red fox	MODERN SPECIES							ENSVVUG00000011643	ENSVVUG00000011639	ENSVVUG00000011630	HTRA1 (ENSVVUG00000011603) #16	PLEKHA1 (ENSVVUG00000011580) #17	BTBD16 (ENSVVUG00000011562) #18	TACC2 (ENSVVUG00000011536) #19	NSMCE4A (ENSVVUG00000011499) #20	ENSVVUG00000011488	ATE1 (ENSVVUG00000011469) #21	FGFR2 (ENSVVUG00000011385) #22	WDR11 (ENSVVUG00000011299) #23	ENSVVUG00000011295	PLPP4 (ENSVVUG00000011275) #24	ENSVVUG00000011255	SEC23IP (ENSVVUG00000011215) #25	MCMBP (ENSVVUG00000011144) #26	INPP5F (ENSVVUG00000011092) #27	BAG3 (ENSVVUG00000011045) #29	TIAL1 (ENSVVUG00000011029) #30	RGS10 (ENSVVUG00000011012)	GRK5 (ENSVVUG00000010990) #32	ENSVVUG00000010962 #33	SFXN4 (ENSVVUG00000010952) #34	DENND10 (ENSVVUG00000010922) #35	EIF3A (ENSVVUG00000010853) #36
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00390000017554 #10	ENSGT00940000163005.a	ENSGT00390000017384.hb #11	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT01010000224541	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Ursidae	ANCESTRAL SPECIES	5	ENSGT00390000017554 #10	ENSGT00940000163005.a	ENSGT00390000017384.hb #11	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT01010000224541	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955.d #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00940000166528.a.a	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Giant Panda	MODERN SPECIES	16	HMX3 (ENSAMEG00000024653) #7	ACADSB (ENSAMEG00000004639) #8	ENSAMEG00000004665 #9	ENSAMEG00000004671 #10	ENSAMEG00000030562	ENSAMEG00000004685 #11	ENSAMEG00000004692	ENSAMEG00000008992	HTRA1 (ENSAMEG00000024939) #16	PLEKHA1 (ENSAMEG00000024104) #17	BTBD16 (ENSAMEG00000010849) #18	TACC2 (ENSAMEG00000010858) #19	NSMCE4A (ENSAMEG00000010897) #20	ENSAMEG00000010913	ATE1 (ENSAMEG00000010918) #21	FGFR2 (ENSAMEG00000010959) #22	WDR11 (ENSAMEG00000010302) #23	PLPP4 (ENSAMEG00000010299) #24	SEC23IP (ENSAMEG00000010251) #25	ENSAMEG00000001122	MCMBP (ENSAMEG00000010208) #26	INPP5F (ENSAMEG00000010186) #27	BAG3 (ENSAMEG00000010175) #29	TIAL1 (ENSAMEG00000010147) #30	RGS10 (ENSAMEG00000010141) #31	GRK5 (ENSAMEG00000010049) #32	PRDX3 (ENSAMEG00000010025) #33	ENSAMEG00000010019 #34	DENND10 (ENSAMEG00000009999) #35	EIF3A (ENSAMEG00000009961) #36	ENSAMEG00000025767
Ursus	ANCESTRAL SPECIES	7	ENSGT00390000017384.hb.a #11	ENSGT00390000017384.hb.b #11	ENSGT00940000154525.b.a #13	ENSGT00940000162108.sb.a ##14	ENSGT00940000162108.tb #14	ENSGT01010000224541	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955.d #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00940000166528.a.a	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00390000000403 #37
American black bear	MODERN SPECIES	5186																FGFR2 (ENSUAMG00000017700) #22
Polar bear	DUPLICATION
Polar bear	MODERN SPECIES	92	ENSUMAG00000005171 #11	CUZD1 (ENSUMAG00000005153) #13	ENSUMAG00000005147	ENSUMAG00000005031 #14	C10orf120 (ENSUMAG00000005005)	ENSUMAG00000004990	ENSUMAG00000004981	HTRA1 (ENSUMAG00000004978) #16	PLEKHA1 (ENSUMAG00000004973) #17	BTBD16 (ENSUMAG00000004944) #18	TACC2 (ENSUMAG00000004546) #19	NSMCE4A (ENSUMAG00000004478) #20	ENSUMAG00000004468	ATE1 (ENSUMAG00000004457) #21	ENSUMAG00000004366 #22	ENSUMAG00000004111 #22	WDR11 (ENSUMAG00000004075) #23	ENSUMAG00000004063	PLPP4 (ENSUMAG00000004036) #24	SEC23IP (ENSUMAG00000003896) #25	ENSUMAG00000003871	MCMBP (ENSUMAG00000003425) #26	INPP5F (ENSUMAG00000003243) #27	BAG3 (ENSUMAG00000003213) #29	TIAL1 (ENSUMAG00000003207) #30	RGS10 (ENSUMAG00000003205) #31	GRK5 (ENSUMAG00000003203) #32	PRDX3 (ENSUMAG00000003198) #33	SFXN4 (ENSUMAG00000003195) #34	DENND10 (ENSUMAG00000003193) #35	EIF3A (ENSUMAG00000003180) #36
Polar bear	MODERN SPECIES	92	ENSUMAG00000005180 #11	ENSUMAG00000005171 #11	CUZD1 (ENSUMAG00000005153) #13	ENSUMAG00000005147	ENSUMAG00000005031 #14	C10orf120 (ENSUMAG00000005005)	ENSUMAG00000004990	ENSUMAG00000004981	HTRA1 (ENSUMAG00000004978) #16	PLEKHA1 (ENSUMAG00000004973) #17	BTBD16 (ENSUMAG00000004944) #18	TACC2 (ENSUMAG00000004546) #19	NSMCE4A (ENSUMAG00000004478) #20	ENSUMAG00000004468	ATE1 (ENSUMAG00000004457) #21	ENSUMAG00000004366 #22	ENSUMAG00000004111 #22	WDR11 (ENSUMAG00000004075) #23	ENSUMAG00000004063	PLPP4 (ENSUMAG00000004036) #24	SEC23IP (ENSUMAG00000003896) #25	ENSUMAG00000003871	MCMBP (ENSUMAG00000003425) #26	INPP5F (ENSUMAG00000003243) #27	BAG3 (ENSUMAG00000003213) #29	TIAL1 (ENSUMAG00000003207) #30	RGS10 (ENSUMAG00000003205) #31	GRK5 (ENSUMAG00000003203) #32	PRDX3 (ENSUMAG00000003198) #33	SFXN4 (ENSUMAG00000003195) #34	DENND10 (ENSUMAG00000003193) #35
Mustelinae	ANCESTRAL SPECIES	40	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384.hb #11	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00940000163882	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00390000000403 #37	ENSGT00940000162008
Ferret	MODERN SPECIES	193	CUZD1 (ENSMPUG00000002814) #13	ENSMPUG00000002820 #14	ENSMPUG00000002877	C10orf120 (ENSMPUG00000002881)	ENSMPUG00000002887	ENSMPUG00000002892	HTRA1 (ENSMPUG00000002895) #16	PLEKHA1 (ENSMPUG00000002899) #17	BTBD16 (ENSMPUG00000002903) #18	ENSMPUG00000002944 #19	ENSMPUG00000002953 #19	NSMCE4A (ENSMPUG00000002960) #20	ATE1 (ENSMPUG00000002968) #21	ENSMPUG00000002979	ENSMPUG00000002985	FGFR2 (ENSMPUG00000002989) #22	ENSMPUG00000002994	WDR11 (ENSMPUG00000002997) #23	PLPP4 (ENSMPUG00000003005) #24	SEC23IP (ENSMPUG00000003023) #25	MCMBP (ENSMPUG00000003036) #26	INPP5F (ENSMPUG00000003046) #27	BAG3 (ENSMPUG00000003057) #29	TIAL1 (ENSMPUG00000003060) #30	RGS10 (ENSMPUG00000003064) #31	GRK5 (ENSMPUG00000003068) #32	PRDX3 (ENSMPUG00000003074) #33	SFXN4 (ENSMPUG00000003077) #34	DENND10 (ENSMPUG00000003085) #35	EIF3A (ENSMPUG00000003093) #36	CACUL1 (ENSMPUG00000003204) #37
American mink	MODERN SPECIES	35	HMX2 (ENSNVIG00000007861)	HMX3 (ENSNVIG00000007846) #7	ACADSB (ENSNVIG00000007815) #8	IKZF5 (ENSNVIG00000007802) #9	PSTK (ENSNVIG00000007798) #10	ENSNVIG00000007783 #11	CUZD1 (ENSNVIG00000007746) #13	C10orf120 (ENSNVIG00000007718)	ENSNVIG00000007221	HTRA1 (ENSNVIG00000007206) #16	PLEKHA1 (ENSNVIG00000007135) #17	BTBD16 (ENSNVIG00000007104) #18	TACC2 (ENSNVIG00000006963) #19	NSMCE4A (ENSNVIG00000006954) #20	ATE1 (ENSNVIG00000006880) #21	FGFR2 (ENSNVIG00000006193) #22	WDR11 (ENSNVIG00000006011) #23	ENSNVIG00000005981	PLPP4 (ENSNVIG00000005960) #24	SEC23IP (ENSNVIG00000005465) #25	MCMBP (ENSNVIG00000005366) #26	INPP5F (ENSNVIG00000005245) #27	BAG3 (ENSNVIG00000005182) #29	TIAL1 (ENSNVIG00000005133) #30	RGS10 (ENSNVIG00000005120) #31	GRK5 (ENSNVIG00000005095) #32	ENSNVIG00000005067 #33	SFXN4 (ENSNVIG00000005056) #34	DENND10 (ENSNVIG00000005028) #35	EIF3A (ENSNVIG00000004975) #36	CACUL1 (ENSNVIG00000004912) #37
Felidae	ANCESTRAL SPECIES	14	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384.ib #11	ENSGT00940000163005.b	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Cat	MODERN SPECIES	242	ENSFCAG00000030445 #11	ENSFCAG00000007571 #11	ENSFCAG00000041375	ENSFCAG00000029545 #13	C10orf120 (ENSFCAG00000035584)	ENSFCAG00000026044 #14	ENSFCAG00000003657	ENSFCAG00000047757	ENSFCAG00000048419	HTRA1 (ENSFCAG00000003656) #16	PLEKHA1 (ENSFCAG00000023664) #17	BTBD16 (ENSFCAG00000003652) #18	NSMCE4A (ENSFCAG00000003647) #20	TACC2 (ENSFCAG00000026479) #19	ATE1 (ENSFCAG00000027935) #21	FGFR2 (ENSFCAG00000003692) #22	WDR11 (ENSFCAG00000014314) #23	PLPP4 (ENSFCAG00000042026) #24	SEC23IP (ENSFCAG00000014908) #25	MCMBP (ENSFCAG00000014907) #26	INPP5F (ENSFCAG00000024040) #27	BAG3 (ENSFCAG00000023182) #29	TIAL1 (ENSFCAG00000031690) #30	RGS10 (ENSFCAG00000026725) #31	GRK5 (ENSFCAG00000010660) #32	PRDX3 (ENSFCAG00000010659) #33	SFXN4 (ENSFCAG00000010658) #34	DENND10 (ENSFCAG00000010657) #35	EIF3A (ENSFCAG00000010656) #36	ENSFCAG00000051869	CACUL1 (ENSFCAG00000044111) #37
Panthera	ANCESTRAL SPECIES	8	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384.ib #11	ENSGT00940000163005.b	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Tiger	DUPLICATION
Tiger	MODERN SPECIES	210				ENSPTIG00000007416	CUZD1 (ENSPTIG00000005962) #13	ENSPTIG00000003767 #14	C10orf120 (ENSPTIG00000021374)	ENSPTIG00000019475	ENSPTIG00000018456 #16	PLEKHA1 (ENSPTIG00000015102) #17	BTBD16 (ENSPTIG00000014571) #18	ENSPTIG00000022110 #19	NSMCE4A (ENSPTIG00000022082) #20	ATE1 (ENSPTIG00000021995) #21	ENSPTIG00000021238 #22	ENSPTIG00000007977 #22	WDR11 (ENSPTIG00000001166) #23	PLPP4 (ENSPTIG00000018990) #24	SEC23IP (ENSPTIG00000017676) #25	MCMBP (ENSPTIG00000014781) #26	INPP5F (ENSPTIG00000011407) #27	BAG3 (ENSPTIG00000009763) #29	TIAL1 (ENSPTIG00000007899) #30	RGS10 (ENSPTIG00000006086) #31	GRK5 (ENSPTIG00000021829) #32	PRDX3 (ENSPTIG00000021567) #33	SFXN4 (ENSPTIG00000020304) #34	DENND10 (ENSPTIG00000018111) #35	EIF3A (ENSPTIG00000013403) #36	CACUL1 (ENSPTIG00000012422) #37	PRLHR (ENSPTIG00000000631)
Tiger	MODERN SPECIES	210					ENSPTIG00000007416	CUZD1 (ENSPTIG00000005962) #13	ENSPTIG00000003767 #14	C10orf120 (ENSPTIG00000021374)	ENSPTIG00000019475	ENSPTIG00000018456 #16	PLEKHA1 (ENSPTIG00000015102) #17	BTBD16 (ENSPTIG00000014571) #18	ENSPTIG00000022110 #19	NSMCE4A (ENSPTIG00000022082) #20	ATE1 (ENSPTIG00000021995) #21	ENSPTIG00000021238 #22	ENSPTIG00000007977 #22	WDR11 (ENSPTIG00000001166) #23	PLPP4 (ENSPTIG00000018990) #24	SEC23IP (ENSPTIG00000017676) #25	MCMBP (ENSPTIG00000014781) #26	INPP5F (ENSPTIG00000011407) #27	BAG3 (ENSPTIG00000009763) #29	TIAL1 (ENSPTIG00000007899) #30	RGS10 (ENSPTIG00000006086) #31	GRK5 (ENSPTIG00000021829) #32	PRDX3 (ENSPTIG00000021567) #33	SFXN4 (ENSPTIG00000020304) #34	DENND10 (ENSPTIG00000018111) #35	EIF3A (ENSPTIG00000013403) #36	CACUL1 (ENSPTIG00000012422) #37
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384.ib.d #11	ENSGT00390000017384.ib.c #11	ENSGT00940000163005.b	ENSGT00940000154525.b.a #13	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
lion	MODERN SPECIES	11	IKZF5 (ENSPLOG00000016444) #9	PSTK (ENSPLOG00000016472) #10	ENSPLOG00000016528 #11	ENSPLOG00000016571 #11	ENSPLOG00000016623	CUZD1 (ENSPLOG00000016651) #13	ENSPLOG00000016884 #14	C10orf120 (ENSPLOG00000017895)	HTRA1 (ENSPLOG00000017957) #16	PLEKHA1 (ENSPLOG00000018098) #17	BTBD16 (ENSPLOG00000018372) #18	ENSPLOG00000018655 #19	ENSPLOG00000019457 #19	NSMCE4A (ENSPLOG00000019528) #20	ATE1 (ENSPLOG00000019598) #21	FGFR2 (ENSPLOG00000020164) #22	WDR11 (ENSPLOG00000021477) #23	PLPP4 (ENSPLOG00000021510) #24	SEC23IP (ENSPLOG00000021541) #25	MCMBP (ENSPLOG00000021644) #26	INPP5F (ENSPLOG00000021703) #27	BAG3 (ENSPLOG00000021815) #29	TIAL1 (ENSPLOG00000021852) #30	RGS10 (ENSPLOG00000021912) #31	GRK5 (ENSPLOG00000021943) #32	PRDX3 (ENSPLOG00000021953) #33	SFXN4 (ENSPLOG00000021975) #34	DENND10 (ENSPLOG00000022001) #35	EIF3A (ENSPLOG00000022036) #36	NANOS1 (ENSPLOG00000022092)	CACUL1 (ENSPLOG00000022099) #37
leopard	DUPLICATION
leopard	MODERN SPECIES	33									HTRA1 (ENSPPRG00000002826) #16	PLEKHA1 (ENSPPRG00000003604) #17	BTBD16 (ENSPPRG00000003961) #18	ENSPPRG00000007110 #19	NSMCE4A (ENSPPRG00000007618) #20	ATE1 (ENSPPRG00000009731) #21	ENSPPRG00000011499 #22	ENSPPRG00000017103 #22	WDR11 (ENSPPRG00000021913) #23	PLPP4 (ENSPPRG00000023280) #24	SEC23IP (ENSPPRG00000022653) #25	MCMBP (ENSPPRG00000001647) #26	INPP5F (ENSPPRG00000002675) #27	BAG3 (ENSPPRG00000002763) #29	TIAL1 (ENSPPRG00000003226) #30	RGS10 (ENSPPRG00000003836) #31	GRK5 (ENSPPRG00000005052) #32	PRDX3 (ENSPPRG00000005382) #33	SFXN4 (ENSPPRG00000005852) #34	DENND10 (ENSPPRG00000007455) #35	EIF3A (ENSPPRG00000008918) #36	NANOS1 (ENSPPRG00000021230)	CACUL1 (ENSPPRG00000009658) #37
leopard	MODERN SPECIES	33										HTRA1 (ENSPPRG00000002826) #16	PLEKHA1 (ENSPPRG00000003604) #17	BTBD16 (ENSPPRG00000003961) #18	ENSPPRG00000007110 #19	NSMCE4A (ENSPPRG00000007618) #20	ATE1 (ENSPPRG00000009731) #21	ENSPPRG00000011499 #22	ENSPPRG00000017103 #22	WDR11 (ENSPPRG00000021913) #23	PLPP4 (ENSPPRG00000023280) #24	SEC23IP (ENSPPRG00000022653) #25	MCMBP (ENSPPRG00000001647) #26	INPP5F (ENSPPRG00000002675) #27	BAG3 (ENSPPRG00000002763) #29	TIAL1 (ENSPPRG00000003226) #30	RGS10 (ENSPPRG00000003836) #31	GRK5 (ENSPPRG00000005052) #32	PRDX3 (ENSPPRG00000005382) #33	SFXN4 (ENSPPRG00000005852) #34	DENND10 (ENSPPRG00000007455) #35	EIF3A (ENSPPRG00000008918) #36	NANOS1 (ENSPPRG00000021230)
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00390000017384 #11	ENSGT00940000163005.a	ENSGT00940000163005.b	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112.d	ENSGT00390000012112.c	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Suina	ANCESTRAL SPECIES	6	ENSGT00940000163005.a	ENSGT00940000163005.b	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112.c.e.b	ENSGT00390000012112.c.e.a	ENSGT00390000012112.d	ENSGT00390000012112.c.f	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Pig	MODERN SPECIES	5	C14H10orf120 (ENSSSCG00000010717)	SPMI (ENSSSCG00000002977)	PSP-I (ENSSSCG00000002978)	PSP-II (ENSSSCG00000061335)	ENSSSCG00000021947	AWN (ENSSSCG00000002980)	ENSSSCG00000049231	ENSSSCG00000055799	HTRA1 (ENSSSCG00000010703) #16	PLEKHA1 (ENSSSCG00000010702) #17	BTBD16 (ENSSSCG00000010701) #18	TACC2 (ENSSSCG00000037530) #19	NSMCE4A (ENSSSCG00000010700) #20	ENSSSCG00000057767	ATE1 (ENSSSCG00000010699) #21	FGFR2 (ENSSSCG00000010698) #22	ENSSSCG00000041462	WDR11 (ENSSSCG00000010692) #23	PLPP4 (ENSSSCG00000010691) #24	SEC23IP (ENSSSCG00000010690) #25	ENSSSCG00000056743	MCMBP (ENSSSCG00000010688) #26	INPP5F (ENSSSCG00000010687) #27	BAG3 (ENSSSCG00000010686) #29	TIAL1 (ENSSSCG00000010685) #30	RGS10 (ENSSSCG00000039838) #31	GRK5 (ENSSSCG00000010683) #32	PRDX3 (ENSSSCG00000010682) #33	SFXN4 (ENSSSCG00000010681) #34	DENND10 (ENSSSCG00000010680) #35	EIF3A (ENSSSCG00000010679) #36
Chacoan peccary	MODERN SPECIES	955	PSTK (ENSCWAG00000018180) #10	C10orf88 (ENSCWAG00000018230) #11	ENSCWAG00000009087	ENSCWAG00000009129	C10orf120 (ENSCWAG00000009823)	ENSCWAG00000009916	ENSCWAG00000010277	ENSCWAG00000010366	ENSCWAG00000010416	HTRA1 (ENSCWAG00000010613) #16	PLEKHA1 (ENSCWAG00000010671) #17	BTBD16 (ENSCWAG00000010937) #18	ENSCWAG00000011139 #19	NSMCE4A (ENSCWAG00000013284) #20	ATE1 (ENSCWAG00000013413) #21	FGFR2 (ENSCWAG00000013844) #22	WDR11 (ENSCWAG00000017961) #23	ENSCWAG00000017992	PLPP4 (ENSCWAG00000018014) #24	SEC23IP (ENSCWAG00000018097) #25	MCMBP (ENSCWAG00000018167) #26	INPP5F (ENSCWAG00000018266) #27	BAG3 (ENSCWAG00000018369) #29	TIAL1 (ENSCWAG00000018390) #30	RGS10 (ENSCWAG00000018430) #31	GRK5 (ENSCWAG00000018519) #32	PRDX3 (ENSCWAG00000018552) #33	SFXN4 (ENSCWAG00000018584) #34	DENND10 (ENSCWAG00000018618) #35	EIF3A (ENSCWAG00000018666) #36	NANOS1 (ENSCWAG00000018760)
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00390000017384 #11	ENSGT00940000163005.a	ENSGT00940000163005.b	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112.d	ENSGT00390000012112.c	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000166688	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Camelidae	ANCESTRAL SPECIES	4	ENSGT00940000163005.a	ENSGT00390000017384 #11	ENSGT00940000163005.b	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112.d	ENSGT00390000012112.c	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000166688	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431.g #35	ENSGT00730000111063 #36	ENSGT00390000000403 #37
Alpaca	MODERN SPECIES	1457														NSMCE4A (ENSVPAG00000006534) #20	ATE1 (ENSVPAG00000006532) #21	FGFR2 (ENSVPAG00000006520) #22
Arabian camel	MODERN SPECIES	2	ENSCDRG00005007985	C10orf120 (ENSCDRG00005008312)	ENSCDRG00005008358	ENSCDRG00005008386	ENSCDRG00005008442	ENSCDRG00005008546	ENSCDRG00005008578	HTRA1 (ENSCDRG00005008605) #16	ENSCDRG00005008651	PLEKHA1 (ENSCDRG00005008676) #17	BTBD16 (ENSCDRG00005008822) #18	TACC2 (ENSCDRG00005009143) #19	NSMCE4A (ENSCDRG00005013236) #20	ENSCDRG00005013283	ATE1 (ENSCDRG00005013374) #21	FGFR2 (ENSCDRG00005014046) #22	ENSCDRG00005014853	WDR11 (ENSCDRG00005014918) #23	PLPP4 (ENSCDRG00005015079) #24	SEC23IP (ENSCDRG00005015175) #25	MCMBP (ENSCDRG00005015289) #26	INPP5F (ENSCDRG00005015415) #27	ENSCDRG00005015966	BAG3 (ENSCDRG00005016010) #29	TIAL1 (ENSCDRG00005016058) #30	RGS10 (ENSCDRG00005016243) #31	GRK5 (ENSCDRG00005016297) #32	PRDX3 (ENSCDRG00005016447) #33	SFXN4 (ENSCDRG00005016498) #34	DENND10 (ENSCDRG00005016616) #35	EIF3A (ENSCDRG00005016694) #36
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00390000017384 #11	ENSGT00940000163005.a	ENSGT00940000163005.b	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112.d	ENSGT00390000012112.c	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000166688	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Pecora	ANCESTRAL SPECIES	12	ENSGT00390000017384 #11	ENSGT00940000163005.a	ENSGT00940000163005.b	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112.d	ENSGT00390000012112.c	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000169826	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000166688	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36
Yarkand deer	MODERN SPECIES	6	ENSCHYG00000013211	ENSCHYG00000013157 #11	ENSCHYG00000013013 #11	ENSCHYG00000012970	ENSCHYG00000012814	C10orf120 (ENSCHYG00000012768)	ENSCHYG00000012694 #14	ENSCHYG00000012574	HTRA1 (ENSCHYG00000012466) #16	PLEKHA1 (ENSCHYG00000012229) #17	BTBD16 (ENSCHYG00000011865) #18	TACC2 (ENSCHYG00000010835) #19	NSMCE4A (ENSCHYG00000010654) #20	ENSCHYG00000010624	ATE1 (ENSCHYG00000010156) #21	FGFR2 (ENSCHYG00000008730) #22	WDR11 (ENSCHYG00000008551) #23	ENSCHYG00000008531	PLPP4 (ENSCHYG00000008482) #24	SEC23IP (ENSCHYG00000008365) #25	MCMBP (ENSCHYG00000008251) #26	ENSCHYG00000008228	INPP5F (ENSCHYG00000008007) #27	BAG3 (ENSCHYG00000007937) #29	TIAL1 (ENSCHYG00000007795) #30	RGS10 (ENSCHYG00000007690) #31	GRK5 (ENSCHYG00000007383) #32	PRDX3 (ENSCHYG00000007298) #33	SFXN4 (ENSCHYG00000007221) #34	DENND10 (ENSCHYG00000007162) #35	ENSCHYG00000007151
Percora_a	ANCESTRAL SPECIES	14	ENSGT00940000162108.sb.b ##14	ENSGT00940000162108.sb.a ##14	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112.d.a	ENSGT00390000012112.d.b	ENSGT00390000012112.c	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000169826	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Siberian musk deer	MODERN SPECIES	1161	ENSMMSG00000013281 #11	ENSMMSG00000013300	ENSMMSG00000013323 #11	ENSMMSG00000013335 ##14	ENSMMSG00000013363 #14	C10orf120 (ENSMMSG00000013433)	ENSMMSG00000013463	ENSMMSG00000013503	ENSMMSG00000013536	HTRA1 (ENSMMSG00000013570) #16	PLEKHA1 (ENSMMSG00000013631) #17	BTBD16 (ENSMMSG00000013754) #18	TACC2 (ENSMMSG00000013885) #19	NSMCE4A (ENSMMSG00000015672) #20	ATE1 (ENSMMSG00000015713) #21	FGFR2 (ENSMMSG00000016023) #22	WDR11 (ENSMMSG00000016506) #23	PLPP4 (ENSMMSG00000016645) #24	ENSMMSG00000016717	ENSMMSG00000016738	SEC23IP (ENSMMSG00000016779) #25	MCMBP (ENSMMSG00000016915) #26	INPP5F (ENSMMSG00000016998) #27	BAG3 (ENSMMSG00000017210) #29	ENSMMSG00000017248 #30	RGS10 (ENSMMSG00000017368) #31	GRK5 (ENSMMSG00000017460) #32	ENSMMSG00000017543	PRDX3 (ENSMMSG00000017559) #33	SFXN4 (ENSMMSG00000017594) #34	DENND10 (ENSMMSG00000017673) #35
Bovidae	ANCESTRAL SPECIES	24	ENSGT00940000162108.sb.b ##14	ENSGT00940000162108.sb.a ##14	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112.d.a	ENSGT00390000012112.d.b	ENSGT00390000012112.c	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000169826	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Caprinae	ANCESTRAL SPECIES	19	ENSGT00940000163005.a	ENSGT00390000017384.x #11	ENSGT00940000162108.sb.a ##14	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112.d.a	ENSGT00390000012112.d.b	ENSGT00390000012112.c	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068.o #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Goat	MODERN SPECIES	18	PSTK (ENSCHIG00000018657) #10	ENSCHIG00000021927 #11	ENSCHIG00000023064 #11	ENSCHIG00000010921 #14	C10orf120 (ENSCHIG00000016466)	ENSCHIG00000000456	ENSCHIG00000014539	ENSCHIG00000020915	ENSCHIG00000011076	HTRA1 (ENSCHIG00000015305) #16	PLEKHA1 (ENSCHIG00000005289) #17	BTBD16 (ENSCHIG00000021282) #18	TACC2 (ENSCHIG00000013177) #19	NSMCE4A (ENSCHIG00000015022) #20	ATE1 (ENSCHIG00000011980) #21	FGFR2 (ENSCHIG00000017963) #22	ENSCHIG00000003717 #23	PLPP4 (ENSCHIG00000013810) #24	ENSCHIG00000016797	SEC23IP (ENSCHIG00000014446) #25	MCMBP (ENSCHIG00000016174) #26	INPP5F (ENSCHIG00000013653) #27	BAG3 (ENSCHIG00000019195) #29	TIAL1 (ENSCHIG00000020810) #30	RGS10 (ENSCHIG00000011045) #31	GRK5 (ENSCHIG00000003897) #32	PRDX3 (ENSCHIG00000018632) #33	SFXN4 (ENSCHIG00000011807) #34	DENND10 (ENSCHIG00000020782) #35	EIF3A (ENSCHIG00000016597) #36	NANOS1 (ENSCHIG00000004298)
Rambouillet Sheep	MODERN SPECIES	14	ENSOARG00020022490	ENSOARG00020022472 ##14	ENSOARG00020022445 #14	C10orf120 (ENSOARG00020022395)	ENSOARG00020022345	ENSOARG00020022322	ENSOARG00020022296	ENSOARG00020022252	ENSOARG00020022216	HTRA1 (ENSOARG00020022118) #16	PLEKHA1 (ENSOARG00020021950) #17	BTBD16 (ENSOARG00020021862) #18	NSMCE4A (ENSOARG00020019481) #20	ATE1 (ENSOARG00020019169) #21	ENSOARG00020019110	FGFR2 (ENSOARG00020018761) #22	ENSOARG00020018691	WDR11 (ENSOARG00020018347) #23	PLPP4 (ENSOARG00020018154) #24	ENSOARG00020018072	ENSOARG00020018045	SEC23IP (ENSOARG00020017426) #25	MCMBP (ENSOARG00020017074) #26	INPP5F (ENSOARG00020014985) #27	BAG3 (ENSOARG00020014869) #29	TIAL1 (ENSOARG00020014734) #30	RGS10 (ENSOARG00020014603) #31	ENSOARG00020014577	GRK5 (ENSOARG00020014464) #32	PRDX3 (ENSOARG00020014412) #33	SFXN4 (ENSOARG00020014267) #34
Bovinae	ANCESTRAL SPECIES	22	ENSGT00940000162108.sb.b ##14	ENSGT00940000162108.sb.a ##14	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112.d.a	ENSGT00390000012112.d.b	ENSGT00390000012112.c	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000169826	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00960000193053	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36
American bison	MODERN SPECIES	3316	C10orf88 (ENSBBBG00000011048) #11	ENSBBBG00000011038	ENSBBBG00000011033	ENSBBBG00000010993 #14	C10orf120 (ENSBBBG00000001875)	ENSBBBG00000008726	ENSBBBG00000010708	ENSBBBG00000010694	ENSBBBG00000009041 #16	PLEKHA1 (ENSBBBG00000010672) #17	BTBD16 (ENSBBBG00000010631) #18	ENSBBBG00000010608 #19	NSMCE4A (ENSBBBG00000010442) #20	ENSBBBG00000010432	ATE1 (ENSBBBG00000010422) #21	FGFR2 (ENSBBBG00000010374) #22	WDR11 (ENSBBBG00000010323) #23	PLPP4 (ENSBBBG00000010305) #24	SEC23IP (ENSBBBG00000010295) #25	ENSBBBG00000010282	MCMBP (ENSBBBG00000010269) #26	INPP5F (ENSBBBG00000000062) #27	BAG3 (ENSBBBG00000010215) #29	TIAL1 (ENSBBBG00000010202) #30	RGS10 (ENSBBBG00000010192) #31	GRK5 (ENSBBBG00000010180) #32	PRDX3 (ENSBBBG00000007205) #33	SFXN4 (ENSBBBG00000010140) #34	DENND10 (ENSBBBG00000010129) #35	EIF3A (ENSBBBG00000010118) #36	CACUL1 (ENSBBBG00000010099) #37
Bos	ANCESTRAL SPECIES	23	ENSGT00940000163005.b	ENSGT00940000162108.sb.b ##14	ENSGT00940000162108.sb.a ##14	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112.d.a	ENSGT00390000012112.d.b	ENSGT00390000012112.c	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000169826	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.b.a.b.b	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36
Bos_b	ANCESTRAL SPECIES	23	ENSGT00940000163005.b	ENSGT00940000162108.sb.b ##14	ENSGT00940000162108.sb.a ##14	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112.d.a	ENSGT00390000012112.d.b	ENSGT00390000012112.c	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000169826	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.b.a.b.b	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36
Hybrid Bos Indicus	MODERN SPECIES	18	ENSBIXG00005003736	ENSBIXG00005007366 #14	C10orf120 (ENSBIXG00005021964)	ENSBIXG00005021940	ENSBIXG00005021867	ENSBIXG00005021850	ENSBIXG00005021776	ENSBIXG00005021747	ENSBIXG00005021652	HTRA1 (ENSBIXG00005021640) #16	PLEKHA1 (ENSBIXG00005021579) #17	BTBD16 (ENSBIXG00005003629) #18	TACC2 (ENSBIXG00005003615) #19	NSMCE4A (ENSBIXG00005021235) #20	ATE1 (ENSBIXG00005021194) #21	FGFR2 (ENSBIXG00005003546) #22	WDR11 (ENSBIXG00005003481) #23	PLPP4 (ENSBIXG00005020504) #24	SEC23IP (ENSBIXG00005003449) #25	MCMBP (ENSBIXG00005020337) #26	INPP5F (ENSBIXG00005020287) #27	BAG3 (ENSBIXG00005020191) #29	TIAL1 (ENSBIXG00005003333) #30	RGS10 (ENSBIXG00005020105) #31	GRK5 (ENSBIXG00005020062) #32	PRDX3 (ENSBIXG00005020003) #33	SFXN4 (ENSBIXG00005019982) #34	DENND10 (ENSBIXG00005019929) #35	EIF3A (ENSBIXG00005019889) #36	NANOS1 (ENSBIXG00005019834)	CACUL1 (ENSBIXG00005019793) #37
Cow	MODERN SPECIES	18	ENSBTAG00000055162 ##14	ENSBTAG00000039755 #14	C26H10orf120 (ENSBTAG00000010797)	SPADH1 (ENSBTAG00000010796)	SPADH2 (ENSBTAG00000008029)	ENSBTAG00000038684	ENSBTAG00000053545	ENSBTAG00000052092	ENSBTAG00000050618	HTRA1 (ENSBTAG00000008389) #16	PLEKHA1 (ENSBTAG00000004636) #17	BTBD16 (ENSBTAG00000008819) #18	TACC2 (ENSBTAG00000010786) #19	NSMCE4A (ENSBTAG00000019166) #20	ATE1 (ENSBTAG00000003178) #21	FGFR2 (ENSBTAG00000014064) #22	WDR11 (ENSBTAG00000021540) #23	ENSBTAG00000049781	PLPP4 (ENSBTAG00000032106) #24	SEC23IP (ENSBTAG00000007441) #25	ENSBTAG00000048455	MCMBP (ENSBTAG00000009877) #26	INPP5F (ENSBTAG00000021801) #27	BAG3 (ENSBTAG00000013641) #29	TIAL1 (ENSBTAG00000004080) #30	RGS10 (ENSBTAG00000002647) #31	GRK5 (ENSBTAG00000007981) #32	PRDX3 (ENSBTAG00000008731) #33	SFXN4 (ENSBTAG00000008730) #34	DENND10 (ENSBTAG00000008729) #35	EIF3A (ENSBTAG00000002528) #36
Bos_a	ANCESTRAL SPECIES	17	ENSGT00940000163005.a	ENSGT00390000017384.v #11	ENSGT00940000163005.b	ENSGT00940000162108.tb #14	ENSGT00390000005511	ENSGT00390000012112.d.a	ENSGT00390000012112.d.b	ENSGT00390000012112.c	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.b.a.b.b	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Wild yak	MODERN SPECIES	303																FGFR2 (ENSBMUG00000015331) #22	WDR11 (ENSBMUG00000015380) #23	PLPP4 (ENSBMUG00000015400) #24	ENSBMUG00000015410
Domestic yak	MODERN SPECIES	17	ENSBGRG00000025366	ENSBGRG00000025341 #11	ENSBGRG00000025332	ENSBGRG00000025242 #14	C10orf120 (ENSBGRG00000025213)	ENSBGRG00000025185	ENSBGRG00000025155	ENSBGRG00000025138	ENSBGRG00000025099	HTRA1 (ENSBGRG00000025045) #16	PLEKHA1 (ENSBGRG00000024986) #17	BTBD16 (ENSBGRG00000024940) #18	ENSBGRG00000024000 #19	NSMCE4A (ENSBGRG00000023734) #20	ATE1 (ENSBGRG00000023442) #21	FGFR2 (ENSBGRG00000023230) #22	WDR11 (ENSBGRG00000023025) #23	ENSBGRG00000022938 #24	SEC23IP (ENSBGRG00000022602) #25	ENSBGRG00000022579	MCMBP (ENSBGRG00000022255) #26	INPP5F (ENSBGRG00000021737) #27	BAG3 (ENSBGRG00000021665) #29	TIAL1 (ENSBGRG00000021417) #30	RGS10 (ENSBGRG00000021293) #31	GRK5 (ENSBGRG00000020547) #32	PRDX3 (ENSBGRG00000020425) #33	SFXN4 (ENSBGRG00000020303) #34	DENND10 (ENSBGRG00000020185) #35	EIF3A (ENSBGRG00000019771) #36	NANOS1 (ENSBGRG00000019738)
Cetacea	ANCESTRAL SPECIES	15	ENSGT00950000183001.a.a	ENSGT00950000183091.A.a	ENSGT00940000160392	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000166688.a	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Blue whale	MODERN SPECIES	7	IKZF5 (ENSBMSG00010014703) #9	PSTK (ENSBMSG00010014723) #10	ENSBMSG00010014749 #11	ENSBMSG00010014768	ENSBMSG00010014794 #11	ENSBMSG00010014809	ENSBMSG00010014827	ENSBMSG00010014864	C10orf120 (ENSBMSG00010015033)	HTRA1 (ENSBMSG00010015062) #16	PLEKHA1 (ENSBMSG00010015154) #17	BTBD16 (ENSBMSG00010015231) #18	ENSBMSG00010015526 #19	NSMCE4A (ENSBMSG00010017199) #20	ATE1 (ENSBMSG00010017265) #21	FGFR2 (ENSBMSG00010012623) #22	WDR11 (ENSBMSG00010012814) #23	PLPP4 (ENSBMSG00010012851) #24	SEC23IP (ENSBMSG00010012870) #25	MCMBP (ENSBMSG00010012893) #26	ENSBMSG00010012916	INPP5F (ENSBMSG00010012966) #27	ENSBMSG00010012993	BAG3 (ENSBMSG00010013012) #29	TIAL1 (ENSBMSG00010013032) #30	RGS10 (ENSBMSG00010013065) #31	GRK5 (ENSBMSG00010013213) #32	PRDX3 (ENSBMSG00010013313) #33	ENSBMSG00010013351 #34	DENND10 (ENSBMSG00010013398) #35	EIF3A (ENSBMSG00010013423) #36
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00390000005104.j.b	ENSGT00950000183091.A.a	ENSGT00940000160392	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000166688.a	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Sperm whale	MODERN SPECIES	12	ENSPCTG00005004662	BUB3 (ENSPCTG00005004599)	HMX2 (ENSPCTG00005004556)	HMX3 (ENSPCTG00005004538) #7	ACADSB (ENSPCTG00005004501) #8	IKZF5 (ENSPCTG00005004486) #9	PSTK (ENSPCTG00005004477) #10	ENSPCTG00005004457 #11	ENSPCTG00005022370 #11	C10orf120 (ENSPCTG00005022369)	ENSPCTG00005022368	ENSPCTG00005022367 #16	PLEKHA1 (ENSPCTG00005022364) #17	ENSPCTG00005022356 #20	ATE1 (ENSPCTG00005022336) #21	FGFR2 (ENSPCTG00005022152) #22	WDR11 (ENSPCTG00005022064) #23	ENSPCTG00005022049	PLPP4 (ENSPCTG00005022038) #24	ENSPCTG00005022034	ENSPCTG00005022029	SEC23IP (ENSPCTG00005022014) #25	MCMBP (ENSPCTG00005022006) #26	ENSPCTG00005022003	INPP5F (ENSPCTG00005021967) #27	ENSPCTG00005021949	ENSPCTG00005021946	NANOS1 (ENSPCTG00005021940)	EIF3A (ENSPCTG00005021919) #36	FAM45A (ENSPCTG00005021910) #35	TIAL1 (ENSPCTG00005021889) #30
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384.fb.a #11	ENSGT00940000163005.a	ENSGT00390000017384.fb.b #11	ENSGT00940000163005.b	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000166688.a	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Dolphin	MODERN SPECIES	1190															ATE1 (ENSTTRG00000002169) #21	FGFR2 (ENSTTRG00000002160) #22
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384.fb.a #11	ENSGT00940000163005.a	ENSGT00390000017384.fb.b #11	ENSGT00940000163005.b	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000166688.a	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.i #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00940000160392	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384.fb.a #11	ENSGT00390000017384.gb #11	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000166688.a	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.i #33	ENSGT01030000234641.a.b #34	ENSGT00390000014431 #35	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Narwhal	MODERN SPECIES	311	HMX2 (ENSMMNG00015021402)	HMX3 (ENSMMNG00015021392) #7	ACADSB (ENSMMNG00015021378) #8	IKZF5 (ENSMMNG00015021364) #9	PSTK (ENSMMNG00015021353) #10	ENSMMNG00015021338	ENSMMNG00015021326	C10orf120 (ENSMMNG00015021309)	ENSMMNG00015021290	HTRA1 (ENSMMNG00015021277) #16	PLEKHA1 (ENSMMNG00015021236) #17	BTBD16 (ENSMMNG00015021175) #18	ENSMMNG00015021035 #19	NSMCE4A (ENSMMNG00015020951) #20	ATE1 (ENSMMNG00015020901) #21	FGFR2 (ENSMMNG00015020685) #22	WDR11 (ENSMMNG00015020551) #23	PLPP4 (ENSMMNG00015020521) #24	SEC23IP (ENSMMNG00015020467) #25	ENSMMNG00015020452	MCMBP (ENSMMNG00015020433) #26	ENSMMNG00015020417	INPP5F (ENSMMNG00015020349) #27	BAG3 (ENSMMNG00015020314) #29	TIAL1 (ENSMMNG00015020292) #30	RGS10 (ENSMMNG00015020257) #31	GRK5 (ENSMMNG00015020199) #32	ENSMMNG00015020153 #33	SFXN4 (ENSMMNG00015020102) #34	DENND10 (ENSMMNG00015020070) #35	EIF3A (ENSMMNG00015019996) #36
Beluga whale	MODERN SPECIES	65	HMX2 (ENSDLEG00000019773)	HMX3 (ENSDLEG00000019778) #7	ACADSB (ENSDLEG00000019783) #8	IKZF5 (ENSDLEG00000019789) #9	PSTK (ENSDLEG00000019793) #10	ENSDLEG00000019795 #11	ENSDLEG00000019800 #11	CUNH10orf120 (ENSDLEG00000019804)	HTRA1 (ENSDLEG00000019813) #16	PLEKHA1 (ENSDLEG00000019819) #17	BTBD16 (ENSDLEG00000019832) #18	ENSDLEG00000019841 #19	ENSDLEG00000019858 #19	NSMCE4A (ENSDLEG00000007929) #20	ATE1 (ENSDLEG00000007967) #21	FGFR2 (ENSDLEG00000008001) #22	WDR11 (ENSDLEG00000008040) #23	PLPP4 (ENSDLEG00000008083) #24	SEC23IP (ENSDLEG00000008126) #25	MCMBP (ENSDLEG00000008221) #26	ENSDLEG00000008284	INPP5F (ENSDLEG00000008316) #27	ENSDLEG00000008409	BAG3 (ENSDLEG00000008440) #29	TIAL1 (ENSDLEG00000008473) #30	RGS10 (ENSDLEG00000008548) #31	GRK5 (ENSDLEG00000008572) #32	ENSDLEG00000008666 #33	SFXN4 (ENSDLEG00000008691) #34	DENND10 (ENSDLEG00000008728) #35	EIF3A (ENSDLEG00000008753) #36
Vaquita	MODERN SPECIES	7	PSTK (ENSPSNG00000022505) #10	ENSPSNG00000022499 #11	ENSPSNG00000022497	ENSPSNG00000022495 #11	ENSPSNG00000022493	C10orf120 (ENSPSNG00000022490)	ENSPSNG00000022486	ENSPSNG00000022481	HTRA1 (ENSPSNG00000022472) #16	PLEKHA1 (ENSPSNG00000022463) #17	BTBD16 (ENSPSNG00000022446) #18	ENSPSNG00000022440 #19	ENSPSNG00000022404 #19	NSMCE4A (ENSPSNG00000022375) #20	ATE1 (ENSPSNG00000022367) #21	FGFR2 (ENSPSNG00000022313) #22	WDR11 (ENSPSNG00000022247) #23	PLPP4 (ENSPSNG00000022236) #24	SEC23IP (ENSPSNG00000022208) #25	MCMBP (ENSPSNG00000022194) #26	ENSPSNG00000022181	INPP5F (ENSPSNG00000022147) #27	BAG3 (ENSPSNG00000022114) #29	TIAL1 (ENSPSNG00000022095) #30	RGS10 (ENSPSNG00000022064) #31	GRK5 (ENSPSNG00000022025) #32	ENSPSNG00000022004 #33	SFXN4 (ENSPSNG00000021957) #34	DENND10 (ENSPSNG00000021921) #35	EIF3A (ENSPSNG00000021873) #36	ENSPSNG00000021843
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000155447 #22
Hedgehog	MODERN SPECIES	5433																FGFR2 (ENSEEUG00000004024) #22
Common shrew	MODERN SPECIES	4089																ENSSARG00000003756 #22
Atlantogenata	ANCESTRAL SPECIES	118	ENSGT00390000017384 #11	ENSGT00940000163005	ENSGT00940000154525.b.a #13	ENSGT00940000165716	ENSGT00940000162108 #14	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31
Xenarthra	ANCESTRAL SPECIES	824																ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27
Armadillo	MODERN SPECIES	2514															ENSDNOG00000046728	FGFR2 (ENSDNOG00000016895) #22	WDR11 (ENSDNOG00000003071) #23	ENSDNOG00000032307	PLPP4 (ENSDNOG00000016994) #24	SEC23IP (ENSDNOG00000009173) #25	MCMBP (ENSDNOG00000015101) #26	INPP5F (ENSDNOG00000015072) #27
Sloth	MODERN SPECIES	5111																FGFR2 (ENSCHOG00000003406) #22
Afrotheria	ANCESTRAL SPECIES	194													ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31
Tenrec	MODERN SPECIES	4978																FGFR2 (ENSETEG00000011043) #22
Afrotheria_a	ANCESTRAL SPECIES	194													ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31
Elephant	MODERN SPECIES	58													NSMCE4A (ENSLAFG00000004214) #20	ENSLAFG00000027690	ATE1 (ENSLAFG00000016891) #21	FGFR2 (ENSLAFG00000009269) #22	WDR11 (ENSLAFG00000007892) #23	PLPP4 (ENSLAFG00000010841) #24	SEC23IP (ENSLAFG00000004892) #25	ENSLAFG00000010074 #26	INPP5F (ENSLAFG00000001684) #27	BAG3 (ENSLAFG00000030614) #29	TIAL1 (ENSLAFG00000003412) #30	ENSLAFG00000003411	GRK5 (ENSLAFG00000005949) #32
Hyrax	MODERN SPECIES	4833																FGFR2 (ENSPCAG00000011330) #22
Marsupialia	ANCESTRAL SPECIES		ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000154525.b.a #13	ENSGT00950000183145.D	ENSGT00940000162108 #14	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00940000165188	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000157351.j	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000168868	ENSGT00940000164222	ENSGT00730000111063 #36
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000154525.b.a #13	ENSGT00950000183145.D	ENSGT00940000162108 #14	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000157351.j	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000168868	ENSGT00940000164222	ENSGT00730000111063 #36
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000154525.b.a #13	ENSGT00950000183145.D	ENSGT00940000162108 #14	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000157351.j	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000168868	ENSGT00940000164222	ENSGT00730000111063 #36
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000154525.b.a #13	ENSGT00950000183145.D	ENSGT00940000162108 #14	ENSGT00390000005511	ENSGT00390000012112	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00390000016534.B	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000157351.j	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204.e #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000168868	ENSGT00940000164222	ENSGT00730000111063 #36
koala	MODERN SPECIES	30																FGFR2 (ENSPCIG00000004047) #22	WDR11 (ENSPCIG00000004026) #23	ENSPCIG00000019316	PLPP4 (ENSPCIG00000030825) #24	SEC23IP (ENSPCIG00000003012) #25	MCMBP (ENSPCIG00000003033) #26	INPP5F (ENSPCIG00000003062) #27	ENSPCIG00000003103 #29	TIAL1 (ENSPCIG00000003120) #30	RGS10 (ENSPCIG00000003153) #31	GRK5 (ENSPCIG00000003189) #32	PRDX3 (ENSPCIG00000028403) #33	ENSPCIG00000028409 #34	ENSPCIG00000035490	ENSPCIG00000028412	EIF3A (ENSPCIG00000028414) #36
Common wonbat	MODERN SPECIES	1067	IKZF5 (ENSVURG00010018688) #9	ENSVURG00010018686 #10	C10orf88 (ENSVURG00010018674) #11	CUZD1 (ENSVURG00010018665) #13	ENSVURG00010018659	ENSVURG00010018656	ENSVURG00010018628 #14	ENSVURG00010018555	HTRA1 (ENSVURG00010018270) #16	PLEKHA1 (ENSVURG00010018214) #17	ENSVURG00010018198	BTBD16 (ENSVURG00010018157) #18	ENSVURG00010017780 #19	ENSVURG00010017748 #20	ATE1 (ENSVURG00010017712) #21	FGFR2 (ENSVURG00010017618) #22	WDR11 (ENSVURG00010017552) #23	ENSVURG00010017529	PLPP4 (ENSVURG00010017515) #24	SEC23IP (ENSVURG00010017493) #25	MCMBP (ENSVURG00010017481) #26	INPP5F (ENSVURG00010017282) #27	ENSVURG00010017263 #29
Wallaby	MODERN SPECIES	6879																FGFR2 (ENSMEUG00000006530) #22
Tasmanian devil	MODERN SPECIES	1	C10orf88 (ENSSHAG00000024427) #11	ENSSHAG00000011736 #13	ENSSHAG00000028811 #13	ENSSHAG00000023839	ENSSHAG00000022182 #14	ENSSHAG00000007217	ENSSHAG00000007803	HTRA1 (ENSSHAG00000009284) #16	PLEKHA1 (ENSSHAG00000024626) #17	BTBD16 (ENSSHAG00000010960) #18	ENSSHAG00000011665 #19	ENSSHAG00000009993 #19	ENSSHAG00000012962 #20	ENSSHAG00000013127	ATE1 (ENSSHAG00000028389) #21	FGFR2 (ENSSHAG00000006217) #22	WDR11 (ENSSHAG00000012828) #23	ENSSHAG00000013721	PLPP4 (ENSSHAG00000022918) #24	SEC23IP (ENSSHAG00000010548) #25	MCMBP (ENSSHAG00000010768) #26	INPP5F (ENSSHAG00000010978) #27	BAG3 (ENSSHAG00000012049) #29	TIAL1 (ENSSHAG00000012508) #30	RGS10 (ENSSHAG00000024740) #31	GRK5 (ENSSHAG00000013446) #32	PRDX3 (ENSSHAG00000014541) #33	ENSSHAG00000014575 #34	ENSSHAG00000014680	EIF3A (ENSSHAG00000001347) #36	NANOS1 (ENSSHAG00000029338)
Opossum	MODERN SPECIES		CUZD1 (ENSMODG00000007863) #13	ENSMODG00000040843	ENSMODG00000007895	ENSMODG00000007900	ENSMODG00000008170	HTRA1 (ENSMODG00000008235) #16	PLEKHA1 (ENSMODG00000008263) #17	BTBD16 (ENSMODG00000008285) #18	ENSMODG00000038482 #19	ENSMODG00000008327 #19	ENSMODG00000008405	ATE1 (ENSMODG00000008434) #21	ENSMODG00000044877	ENSMODG00000036472	ENSMODG00000008447	FGFR2 (ENSMODG00000008525) #22	WDR11 (ENSMODG00000008627) #23	ENSMODG00000039409	ENSMODG00000008634	PLPP4 (ENSMODG00000008644) #24	ENSMODG00000038446	SEC23IP (ENSMODG00000008685) #25	MCMBP (ENSMODG00000008714) #26	INPP5F (ENSMODG00000008751) #27	BAG3 (ENSMODG00000008764) #29	ENSMODG00000008865	RGS10 (ENSMODG00000047360) #31	ENSMODG00000024855	GRK5 (ENSMODG00000009266) #32	ENSMODG00000009286 #33	ENSMODG00000009292
Platypus	MODERN SPECIES	7	ENSOANG00000045064	ENSOANG00000020984	ENSOANG00000047128 #14	CUZD1 (ENSOANG00000001997) #13	ENSOANG00000043341 #11	PSTK (ENSOANG00000001995) #10	IKZF5 (ENSOANG00000001994) #9	ACADSB (ENSOANG00000013324) #8	HMX3 (ENSOANG00000037629) #7	HMX2 (ENSOANG00000036447)	BUB3 (ENSOANG00000041516)	CPXM2 (ENSOANG00000038396)	ENSOANG00000030444 #19	ENSOANG00000002087 #20	ATE1 (ENSOANG00000047065) #21	FGFR2 (ENSOANG00000029096) #22	WDR11 (ENSOANG00000002737) #23	PLPP4 (ENSOANG00000036798) #24	SEC23IP (ENSOANG00000001533) #25	MCMBP (ENSOANG00000001532) #26	INPP5F (ENSOANG00000001530) #27	BAG3 (ENSOANG00000009317) #29	ENSOANG00000050160	RGS10 (ENSOANG00000012170) #31	GRK5 (ENSOANG00000004388) #32	PRDX3 (ENSOANG00000002979) #33	ENSOANG00000009547 #34	ENSOANG00000009548	EIF3A (ENSOANG00000007359) #36	CACUL1 (ENSOANG00000007361) #37	ENSOANG00000020103
Sauria	ANCESTRAL SPECIES	8	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000154525.b.a #13	ENSGT00940000164475.a.b.b	ENSGT00950000183145.A.b.a	ENSGT00940000163882	ENSGT00950000183145.E	ENSGT01030000235500	ENSGT00950000183145.C	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36
Archelosauria	ANCESTRAL SPECIES	10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000154525.b.a #13	ENSGT00940000164475.a.b.b	ENSGT00950000183145.A.b.a	ENSGT00940000163882	ENSGT00950000183145.E	ENSGT01030000235500	ENSGT00950000183145.C	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36
Archosauria	ANCESTRAL SPECIES	7	ENSGT00390000017384 #11	ENSGT00940000154525.b.a #13	ENSGT00940000164475.a.b.b	ENSGT00950000183145.A.b.a	ENSGT00940000163882	ENSGT00950000183145.C	ENSGT01030000235500	ENSGT00950000183145.E	ENSGT00950000183145.D	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36
Aves	ANCESTRAL SPECIES	6	ENSGT00390000017384 #11	ENSGT00940000154525.b.a #13	ENSGT00940000164475.a.b.b.a	ENSGT00950000183145.A.b.a	ENSGT00940000163882.e.a	ENSGT00950000183145.C	ENSGT01030000235500	ENSGT00950000183145.E	ENSGT00950000183145.D	ENSGT00940000163882.e.b	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36
Neognathae	ANCESTRAL SPECIES	7	ENSGT00390000017384 #11	ENSGT00940000163882.f	ENSGT00940000154525.b.a #13	ENSGT00950000183145.A.b.a	ENSGT00940000163882.e.a	ENSGT00950000183145.C	ENSGT01030000235500	ENSGT00950000183145.E	ENSGT00950000183145.D	ENSGT00940000163882.e.b	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000154525.b.a.d #13	ENSGT00940000163882.f	ENSGT00940000154525.b.a.c.b #13	ENSGT00950000183145.C.b	ENSGT00940000163882.e.a	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36
Anatidae	ANCESTRAL SPECIES	4	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000154525.b.a.d #13	ENSGT00950000183145.C.b	ENSGT00940000163882.f	ENSGT00940000154525.b.a.c.b #13	ENSGT00940000163882.e.a	ENSGT00950000183145.C.a	ENSGT00940000154525.b.a.c.a #13	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Pink-footed goose	MODERN SPECIES	11											HTRA1 (ENSABRG00000000302) #16	PLEKHA1 (ENSABRG00000000331) #17	TACC2 (ENSABRG00000000398) #19	NSMCE4A (ENSABRG00000000562) #20	ATE1 (ENSABRG00000000573) #21	FGFR2 (ENSABRG00000000608) #22	ENSABRG00000000638	WDR11 (ENSABRG00000000644) #23	PLPP4 (ENSABRG00000000668) #24	SEC23IP (ENSABRG00000000804) #25	MCMBP (ENSABRG00000000877) #26	INPP5F (ENSABRG00000000924) #27	BAG3 (ENSABRG00000000967) #29	TIAL1 (ENSABRG00000000984) #30	RGS10 (ENSABRG00000001042) #31	GRK5 (ENSABRG00000001057) #32	PRDX3 (ENSABRG00000001149) #33	SFXN4 (ENSABRG00000001170) #34	ENSABRG00000001251	EIF3A (ENSABRG00000001287) #36	NANOS1 (ENSABRG00000001345)
Duck	MODERN SPECIES	24	HMX3 (ENSAPLG00000025450) #7	ACADSB (ENSAPLG00000015129) #8	IKZF5 (ENSAPLG00000015301) #9	PSTK (ENSAPLG00000015335) #10	ENSAPLG00000015412	C10orf88 (ENSAPLG00000018529) #11	ENSAPLG00000002332	ENSAPLG00000022800 #13	ENSAPLG00000028379	ENSAPLG00000017490 #13	HTRA1 (ENSAPLG00000014182) #16	PLEKHA1 (ENSAPLG00000013754) #17	TACC2 (ENSAPLG00000013559) #19	NSMCE4A (ENSAPLG00000013184) #20	ATE1 (ENSAPLG00000012854) #21	FGFR2 (ENSAPLG00000011952) #22	WDR11 (ENSAPLG00000011124) #23	PLPP4 (ENSAPLG00000011003) #24	ENSAPLG00000018439 #25	ENSAPLG00000025076 #25	MCMBP (ENSAPLG00000009939) #26	ENSAPLG00000028455	ENSAPLG00000021679 #27	ENSAPLG00000021626 #27	ENSAPLG00000029441 #29	TIAL1 (ENSAPLG00000009088) #30	RGS10 (ENSAPLG00000009045) #31	ENSAPLG00000031123 ##32	ENSAPLG00000007885 ##32	PRDX3 (ENSAPLG00000021984) #33	SFXN4 (ENSAPLG00000007674) #34
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000154525.b.a.d #13	ENSGT00950000183145.A.b.a	ENSGT00940000163882.f	ENSGT00950000183145.C.b	ENSGT00940000163882.e.a	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Japanese quail	MODERN SPECIES	24	ACADSB (ENSCJPG00005020171) #8	IKZF5 (ENSCJPG00005020170) #9	PSTK (ENSCJPG00005020169) #10	ENSCJPG00005020168	C10orf88 (ENSCJPG00005020167) #11	ENSCJPG00005020166	ENSCJPG00005020164	ENSCJPG00005020163	ENSCJPG00005020162	ENSCJPG00005020161 #13	HTRA1 (ENSCJPG00005020160) #16	PLEKHA1 (ENSCJPG00005020159) #17	TACC2 (ENSCJPG00005020158) #19	NSMCE4A (ENSCJPG00005020157) #20	ATE1 (ENSCJPG00005020156) #21	FGFR2 (ENSCJPG00005020154) #22	WDR11 (ENSCJPG00005020153) #23	PLPP4 (ENSCJPG00005020152) #24	SEC23IP (ENSCJPG00005020147) #25	MCMBP (ENSCJPG00005020146) #26	INPP5F (ENSCJPG00005020145) #27	BAG3 (ENSCJPG00005020144) #29	ENSCJPG00005020143	RGS10 (ENSCJPG00005020142) #31	GRK5 (ENSCJPG00005020139) #32	PRDX3 (ENSCJPG00005020137) #33	SFXN4 (ENSCJPG00005020136) #34	ENSCJPG00005020135	EIF3A (ENSCJPG00005020132) #36	NANOS1 (ENSCJPG00005020131)	CACUL1 (ENSCJPG00005020128) #37
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000154525.b.a.d #13	ENSGT00950000183145.A.b.a	ENSGT00940000163882.e.a	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Turkey	MODERN SPECIES	28	ENSMGAG00000011305 #36	ENSMGAG00000011328 #34	ENSMGAG00000011324	ENSMGAG00000011337 #33	ENSMGAG00000011341 ##32	ENSMGAG00000011359 #31	ENSMGAG00000017692 ##32	ENSMGAG00000011368	BAG3 (ENSMGAG00000011390) #29	ENSMGAG00000011398 #26	ENSMGAG00000017041 #27	SEC23IP (ENSMGAG00000011411) #25	ENSMGAG00000011434 #24	ENSMGAG00000018783 #23	ENSMGAG00000022256 #23	ENSMGAG00000011456 #22	ENSMGAG00000011508	ENSMGAG00000011490 #21	ENSMGAG00000011516 #19	ENSMGAG00000011530 #17	ENSMGAG00000011551 #16	ENSMGAG00000011580 #11	ENSMGAG00000011568 #13	ENSMGAG00000022374	ENSMGAG00000011564	ENSMGAG00000011584	ENSMGAG00000011599 #9	ENSMGAG00000017710 #10	ACADSB (ENSMGAG00000011603) #8	HMX3 (ENSMGAG00000011613) #7	ENSMGAG00000011619
Chicken	MODERN SPECIES	35	ACADSB (ENSGALG00010001811) #8	PSTK (ENSGALG00010001798) #10	IKZF5 (ENSGALG00010001793) #9	ENSGALG00010001764	C10orf88 (ENSGALG00010001759) #11	CUZD1 (ENSGALG00010001755) #13	ENSGALG00010001743	ENSGALG00010003199	ENSGALG00010001726	ENSGALG00010001707	HTRA1 (ENSGALG00010001705) #16	PLEKHA1 (ENSGALG00010001702) #17	TACC2 (ENSGALG00010001465) #19	NSMCE4A (ENSGALG00010001432) #20	ATE1 (ENSGALG00010001426) #21	FGFR2 (ENSGALG00010001411) #22	WDR11 (ENSGALG00010001398) #23	PLPP4 (ENSGALG00010001287) #24	SEC23IP (ENSGALG00010002396) #25	MCMBP (ENSGALG00010002387) #26	INPP5F (ENSGALG00010002383) #27	BAG3 (ENSGALG00010002371) #29	TIAL1 (ENSGALG00010002361)	RGS10 (ENSGALG00010002277) #31	GRK5 (ENSGALG00010002251) #32	PRDX3 (ENSGALG00010002225) #33	SFXN4 (ENSGALG00010002202) #34	FAM45A (ENSGALG00010002196)	EIF3A (ENSGALG00010002150) #36	NANOS1 (ENSGALG00010002766)	CACUL1 (ENSGALG00010002146) #37
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000163882.f	ENSGT00940000154525.b.a #13	ENSGT00940000163882.e.a	ENSGT00950000183145.C	ENSGT01030000235500	ENSGT00950000183145.E	ENSGT00950000183145.D	ENSGT00940000163882.e.b	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000163882.f	ENSGT00940000154525.b.a #13	ENSGT00940000163882.e.a	ENSGT00950000183145.E	ENSGT01030000235500	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Golden eagle	MODERN SPECIES	2	ACADSB (ENSACCG00020006524) #8	IKZF5 (ENSACCG00020006532) #9	PSTK (ENSACCG00020006551) #10	ENSACCG00020006582	C10orf88 (ENSACCG00020006628) #11	ENSACCG00020006663	ENSACCG00020006746	ENSACCG00020006805 #13	ENSACCG00020006816	HTRA1 (ENSACCG00020006834) #16	ENSACCG00020006849	PLEKHA1 (ENSACCG00020006872) #17	ENSACCG00020006968	NSMCE4A (ENSACCG00020007065) #20	ATE1 (ENSACCG00020007114) #21	FGFR2 (ENSACCG00020007148) #22	WDR11 (ENSACCG00020007177) #23	PLPP4 (ENSACCG00020007199) #24	SEC23IP (ENSACCG00020007215) #25	MCMBP (ENSACCG00020007244) #26	INPP5F (ENSACCG00020007437) #27	BAG3 (ENSACCG00020007545) #29	TIAL1 (ENSACCG00020007557) #30	RGS10 (ENSACCG00020007575) #31	GRK5 (ENSACCG00020007658) #32	PRDX3 (ENSACCG00020007769) #33	SFXN4 (ENSACCG00020007778) #34	ENSACCG00020007799	EIF3A (ENSACCG00020007813) #36	NANOS1 (ENSACCG00020007832)	CACUL1 (ENSACCG00020007856) #37
Kakapo	MODERN SPECIES	22	HMX2 (ENSSHBG00005004253)	HMX3 (ENSSHBG00005004243) #7	ACADSB (ENSSHBG00005004229) #8	IKZF5 (ENSSHBG00005004221) #9	PSTK (ENSSHBG00005004212) #10	ENSSHBG00005004196	C10orf88 (ENSSHBG00005004187) #11	ENSSHBG00005004175	ENSSHBG00005004148	ENSSHBG00005004131	HTRA1 (ENSSHBG00005004092) #16	PLEKHA1 (ENSSHBG00005004075) #17	TACC2 (ENSSHBG00005003706) #19	NSMCE4A (ENSSHBG00005003627) #20	ATE1 (ENSSHBG00005003603) #21	FGFR2 (ENSSHBG00005003568) #22	WDR11 (ENSSHBG00005003553) #23	PLPP4 (ENSSHBG00005003537) #24	SEC23IP (ENSSHBG00005003520) #25	MCMBP (ENSSHBG00005003485) #26	INPP5F (ENSSHBG00005003229) #27	BAG3 (ENSSHBG00005003039) #29	ENSSHBG00005003028	ENSSHBG00005003012	RGS10 (ENSSHBG00005002990) #31	GRK5 (ENSSHBG00005002953) #32	PRDX3 (ENSSHBG00005002865) #33	SFXN4 (ENSSHBG00005002846) #34	ENSSHBG00005002832	EIF3A (ENSSHBG00005002799) #36	NANOS1 (ENSSHBG00005002776)
Passeriformes	ANCESTRAL SPECIES	10	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000163882.f	ENSGT00940000154525.b.a #13	ENSGT00950000183145.C	ENSGT01030000235500	ENSGT00950000183145.E	ENSGT00950000183145.D	ENSGT00940000163882.e.b	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Great tit	MODERN SPECIES	26	ACADSB (ENSPMJG00000005752) #8	PSTK (ENSPMJG00000005749) #10	IKZF5 (ENSPMJG00000005744) #9	ENSPMJG00000005740	C10orf88 (ENSPMJG00000005738) #11	ENSPMJG00000005734	ENSPMJG00000005732	ENSPMJG00000005731	ENSPMJG00000005730	ENSPMJG00000005727	HTRA1 (ENSPMJG00000005725) #16	PLEKHA1 (ENSPMJG00000005718) #17	TACC2 (ENSPMJG00000005700) #19	NSMCE4A (ENSPMJG00000005697) #20	ATE1 (ENSPMJG00000005695) #21	FGFR2 (ENSPMJG00000005686) #22	WDR11 (ENSPMJG00000005652) #23	PLPP4 (ENSPMJG00000005646) #24	SEC23IP (ENSPMJG00000005643) #25	MCMBP (ENSPMJG00000005642) #26	INPP5F (ENSPMJG00000005637) #27	BAG3 (ENSPMJG00000005635) #29	ENSPMJG00000005634	RGS10 (ENSPMJG00000005630) #31	GRK5 (ENSPMJG00000005626) #32	PRDX3 (ENSPMJG00000005590) #33	SFXN4 (ENSPMJG00000005585) #34	ENSPMJG00000005582	EIF3A (ENSPMJG00000005575) #36	NANOS1 (ENSPMJG00000005572)	CACUL1 (ENSPMJG00000005563) #37
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000163882.e.a	ENSGT00940000163882.f	ENSGT00940000154525.b.a #13	ENSGT00950000183145.C	ENSGT01030000235500	ENSGT00950000183145.E	ENSGT00950000183145.D	ENSGT00940000163882.e.b	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00940000160392	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000163882.f	ENSGT00940000154525.b.a #13	ENSGT00950000183145.D	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00950000183091.A.a	ENSGT00940000160392	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000163882.e.a	ENSGT00950000183145.D	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Common canary	MODERN SPECIES	7	ACADSB (ENSSCAG00000013578) #8	IKZF5 (ENSSCAG00000013584) #9	PSTK (ENSSCAG00000013588) #10	ENSSCAG00000013593	ENSSCAG00000013599 #11	ENSSCAG00000013608	ENSSCAG00000013633 #13	ENSSCAG00000013649	ENSSCAG00000013676	ENSSCAG00000013688	HTRA1 (ENSSCAG00000013709) #16	PLEKHA1 (ENSSCAG00000013721) #17	TACC2 (ENSSCAG00000013757) #19	NSMCE4A (ENSSCAG00000013790) #20	ATE1 (ENSSCAG00000013795) #21	FGFR2 (ENSSCAG00000013802) #22	ENSSCAG00000013814	WDR11 (ENSSCAG00000013823) #23	PLPP4 (ENSSCAG00000013843) #24	SEC23IP (ENSSCAG00000013890) #25	MCMBP (ENSSCAG00000014009) #26	INPP5F (ENSSCAG00000014059) #27	BAG3 (ENSSCAG00000014200) #29	TIAL1 (ENSSCAG00000014203) #30	RGS10 (ENSSCAG00000014206) #31	GRK5 (ENSSCAG00000014217) #32	PRDX3 (ENSSCAG00000014236) #33	SFXN4 (ENSSCAG00000014243) #34	ENSSCAG00000014253	EIF3A (ENSSCAG00000014260) #36	NANOS1 (ENSSCAG00000014280)
Zebra finch	MODERN SPECIES	28	BUB3 (ENSTGUG00000011382)	HMX2 (ENSTGUG00000011380)	HMX3 (ENSTGUG00000011379) #7	ACADSB (ENSTGUG00000011363) #8	IKZF5 (ENSTGUG00000023212) #9	PSTK (ENSTGUG00000011358) #10	ENSTGUG00000011344	ENSTGUG00000018513 #11	ENSTGUG00000019976	ENSTGUG00000011310	HTRA1 (ENSTGUG00000011319) #16	PLEKHA1 (ENSTGUG00000011311) #17	TACC2 (ENSTGUG00000011300) #19	NSMCE4A (ENSTGUG00000011287) #20	ATE1 (ENSTGUG00000011274) #21	FGFR2 (ENSTGUG00000011228) #22	WDR11 (ENSTGUG00000011203) #23	PLPP4 (ENSTGUG00000011201) #24	SEC23IP (ENSTGUG00000011192) #25	MCMBP (ENSTGUG00000011183) #26	INPP5F (ENSTGUG00000011167) #27	BAG3 (ENSTGUG00000011164) #29	ENSTGUG00000011148	RGS10 (ENSTGUG00000023661) #31	GRK5 (ENSTGUG00000011126) #32	ENSTGUG00000021412	SFXN4 (ENSTGUG00000011111) #34	ENSTGUG00000011107	EIF3A (ENSTGUG00000011093) #36	NANOS1 (ENSTGUG00000019075)	CACUL1 (ENSTGUG00000011089) #37
Medium ground finch	MODERN SPECIES	72	HMX2 (ENSGFOG00000013831)	ACADSB (ENSGFOG00000013830) #8	IKZF5 (ENSGFOG00000013829) #9	PSTK (ENSGFOG00000013828) #10	ENSGFOG00000013826	C10orf88 (ENSGFOG00000013824) #11	ENSGFOG00000013822	ENSGFOG00000013821	ENSGFOG00000013816 #14	ENSGFOG00000013807	HTRA1 (ENSGFOG00000013803) #16	PLEKHA1 (ENSGFOG00000013792) #17	TACC2 (ENSGFOG00000013784) #19	NSMCE4A (ENSGFOG00000013776) #20	ATE1 (ENSGFOG00000013766) #21	FGFR2 (ENSGFOG00000013752) #22
Flycatcher	MODERN SPECIES	25	HMX3 (ENSFALG00000026829) #7	ACADSB (ENSFALG00000024790) #8	IKZF5 (ENSFALG00000004728) #9	ENSFALG00000004871	C10orf88 (ENSFALG00000028462) #11	ENSFALG00000004913 #13	ENSFALG00000023413	ENSFALG00000004924	ENSFALG00000025833	ENSFALG00000002135	HTRA1 (ENSFALG00000028171) #16	PLEKHA1 (ENSFALG00000002147) #17	TACC2 (ENSFALG00000002148) #19	NSMCE4A (ENSFALG00000002150) #20	ATE1 (ENSFALG00000002151) #21	FGFR2 (ENSFALG00000002152) #22	WDR11 (ENSFALG00000002154) #23	ENSFALG00000024601	PLPP4 (ENSFALG00000026547) #24	SEC23IP (ENSFALG00000002159) #25	MCMBP (ENSFALG00000002162) #26	INPP5F (ENSFALG00000002164) #27	ENSFALG00000024667	BAG3 (ENSFALG00000002165) #29	ENSFALG00000002173	RGS10 (ENSFALG00000002181) #31	GRK5 (ENSFALG00000002184) #32	PRDX3 (ENSFALG00000024188) #33	ENSFALG00000002189 #34	DENND10 (ENSFALG00000002191) #35	EIF3A (ENSFALG00000002192) #36
African ostrich	MODERN SPECIES	701												HTRA1 (ENSSCUG00000015012) #16	PLEKHA1 (ENSSCUG00000015025) #17	NSMCE4A (ENSSCUG00000015044) #20	ATE1 (ENSSCUG00000015066) #21	FGFR2 (ENSSCUG00000015080) #22
Australian saltwater crocodile	MODERN SPECIES	68	CUZD1 (ENSCPRG00005009971) #13	ENSCPRG00005009997	ENSCPRG00005010013	ENSCPRG00005010015	ENSCPRG00005010017	ENSCPRG00005010020	ENSCPRG00005010028	ENSCPRG00005010058	HTRA1 (ENSCPRG00005010065) #16	PLEKHA1 (ENSCPRG00005010094) #17	BTBD16 (ENSCPRG00005010103) #18	ENSCPRG00005010107	TACC2 (ENSCPRG00005010117) #19	NSMCE4A (ENSCPRG00005010129) #20	ATE1 (ENSCPRG00005010141) #21	FGFR2 (ENSCPRG00005010191) #22	WDR11 (ENSCPRG00005010238) #23	PLPP4 (ENSCPRG00005010400) #24	ENSCPRG00005010403	SEC23IP (ENSCPRG00005010423) #25	MCMBP (ENSCPRG00005010437) #26	INPP5F (ENSCPRG00005010451) #27	BAG3 (ENSCPRG00005010481) #29	TIAL1 (ENSCPRG00005010488) #30	ENSCPRG00005010516	GRK5 (ENSCPRG00005010553) #32	PRDX3 (ENSCPRG00005010560) #33	ENSCPRG00005010572	EIF3A (ENSCPRG00005010591) #36	NANOS1 (ENSCPRG00005010610)	CACUL1 (ENSCPRG00005010620) #37
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00940000160392	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000163882	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000163882.d	ENSGT01030000235500.a	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.g #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Emydidae	ANCESTRAL SPECIES	6	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00950000183145.A.a	ENSGT00940000163882.d	ENSGT01030000235500.a	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b.g #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
painted turtle	MODERN SPECIES	846												BTBD16 (ENSCPBG00000003606) #18	TACC2 (ENSCPBG00000003441) #19	NSMCE4A (ENSCPBG00000003371) #20	ATE1 (ENSCPBG00000003324) #21	FGFR2 (ENSCPBG00000003205) #22	WDR11 (ENSCPBG00000003141) #23	PLPP4 (ENSCPBG00000003120) #24	SEC23IP (ENSCPBG00000003097) #25	MCMBP (ENSCPBG00000003053) #26	INPP5F (ENSCPBG00000002119) #27	AP1B1 (ENSCPBG00000001952)	ENSCPBG00000001923	NEFH (ENSCPBG00000001911)	THOC5 (ENSCPBG00000001867)	NIPSNAP1 (ENSCPBG00000001844)
Three-toed box turtle	MODERN SPECIES	39	HMX2 (ENSTMTG00000019363)	HMX3 (ENSTMTG00000019354) #7	ACADSB (ENSTMTG00000019334) #8	IKZF5 (ENSTMTG00000019326) #9	PSTK (ENSTMTG00000019320) #10	C10orf88 (ENSTMTG00000019303) #11	ENSTMTG00000019289	ENSTMTG00000019231	ENSTMTG00000019204	HTRA1 (ENSTMTG00000019179) #16	PLEKHA1 (ENSTMTG00000019123) #17	BTBD16 (ENSTMTG00000019086) #18	ENSTMTG00000019055 #19	NSMCE4A (ENSTMTG00000019033) #20	ATE1 (ENSTMTG00000018984) #21	FGFR2 (ENSTMTG00000018950) #22	WDR11 (ENSTMTG00000018901) #23	PLPP4 (ENSTMTG00000018885) #24	SEC23IP (ENSTMTG00000018842) #25	MCMBP (ENSTMTG00000018812) #26	INPP5F (ENSTMTG00000018304) #27	ENSTMTG00000018261 #29	ENSTMTG00000018249 #29	TIAL1 (ENSTMTG00000018217) #30	RGS10 (ENSTMTG00000018181) #31	GRK5 (ENSTMTG00000017948) ##32	PRDX3 (ENSTMTG00000017906) #33	SFXN4 (ENSTMTG00000017883) #34	ENSTMTG00000017839	EIF3A (ENSTMTG00000017793) #36	NANOS1 (ENSTMTG00000017785)
Testudinidae	ANCESTRAL SPECIES	9	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00950000183145.A.a.c	ENSGT00940000163882.d	ENSGT01030000235500.a	ENSGT00950000183145.E	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.a.a ##32	ENSGT00940000160702.a.b ##32	ENSGT00940000153430.a.b.g #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Goode s thornscrub tortoise	DUPLICATION
Goode s thornscrub tortoise	MODERN SPECIES	21	IKZF5 (ENSGEVG00005010148) #9	PSTK (ENSGEVG00005010124) #10	ENSGEVG00005009999	C10orf88 (ENSGEVG00005009973) #11	ENSGEVG00005009897	ENSGEVG00005009832	ENSGEVG00005009786	ENSGEVG00005009616	ENSGEVG00005009567	HTRA1 (ENSGEVG00005009396) #16	PLEKHA1 (ENSGEVG00005009217) #17	BTBD16 (ENSGEVG00005020101) #18	ENSGEVG00005020092 #19	NSMCE4A (ENSGEVG00005020083) #20	ATE1 (ENSGEVG00005020042) #21	ENSGEVG00005020017 #22	ENSGEVG00005020010 #22	ENSGEVG00005019994	WDR11 (ENSGEVG00005019974) #23	PLPP4 (ENSGEVG00005019965) #24	SEC23IP (ENSGEVG00005019936) #25	MCMBP (ENSGEVG00005019925) #26	INPP5F (ENSGEVG00005019898) #27	BAG3 (ENSGEVG00005019883) #29	TIAL1 (ENSGEVG00005019870) #30	RGS10 (ENSGEVG00005019839) #31	ENSGEVG00005019838 ##32	ENSGEVG00005019814 ##32	PRDX3 (ENSGEVG00005019794) #33	SFXN4 (ENSGEVG00005019784) #34	ENSGEVG00005019776
Goode s thornscrub tortoise	MODERN SPECIES	21	PSTK (ENSGEVG00005010124) #10	ENSGEVG00005009999	C10orf88 (ENSGEVG00005009973) #11	ENSGEVG00005009897	ENSGEVG00005009832	ENSGEVG00005009786	ENSGEVG00005009616	ENSGEVG00005009567	HTRA1 (ENSGEVG00005009396) #16	PLEKHA1 (ENSGEVG00005009217) #17	BTBD16 (ENSGEVG00005020101) #18	ENSGEVG00005020092 #19	NSMCE4A (ENSGEVG00005020083) #20	ATE1 (ENSGEVG00005020042) #21	ENSGEVG00005020017 #22	ENSGEVG00005020010 #22	ENSGEVG00005019994	WDR11 (ENSGEVG00005019974) #23	PLPP4 (ENSGEVG00005019965) #24	SEC23IP (ENSGEVG00005019936) #25	MCMBP (ENSGEVG00005019925) #26	INPP5F (ENSGEVG00005019898) #27	BAG3 (ENSGEVG00005019883) #29	TIAL1 (ENSGEVG00005019870) #30	RGS10 (ENSGEVG00005019839) #31	ENSGEVG00005019838 ##32	ENSGEVG00005019814 ##32	PRDX3 (ENSGEVG00005019794) #33	SFXN4 (ENSGEVG00005019784) #34	ENSGEVG00005019776	EIF3A (ENSGEVG00005019761) #36
Abingdon island giant tortoise	MODERN SPECIES	494									HTRA1 (ENSCABG00000012467) #16	PLEKHA1 (ENSCABG00000012477) #17	BTBD16 (ENSCABG00000012597) #18	ENSCABG00000012601	ENSCABG00000012605 #19	NSMCE4A (ENSCABG00000012609) #20	ATE1 (ENSCABG00000012611) #21	FGFR2 (ENSCABG00000012635) #22	ENSCABG00000013475 #23	ENSCABG00000013477 #23	PLPP4 (ENSCABG00000013478) #24	ENSCABG00000013479
Chinese turtle	MODERN SPECIES	154									ENSPSIG00000012134	ENSPSIG00000011540	HTRA1 (ENSPSIG00000010931) #16	PLEKHA1 (ENSPSIG00000010906) #17	TACC2 (ENSPSIG00000010319) #19	NSMCE4A (ENSPSIG00000010064) #20	ATE1 (ENSPSIG00000009429) #21	FGFR2 (ENSPSIG00000007758) #22	WDR11 (ENSPSIG00000007623) #23	PLPP4 (ENSPSIG00000007283) #24	ENSPSIG00000000417	MCMBP (ENSPSIG00000006179) #26	INPP5F (ENSPSIG00000016807) #27	SEC23IP (ENSPSIG00000016139) #25	BAG3 (ENSPSIG00000015275) #29	ENSPSIG00000013690	ENSPSIG00000013652	GRK5 (ENSPSIG00000008000) #32	PRDX3 (ENSPSIG00000007308) #33	SFXN4 (ENSPSIG00000006657) #34	DENND10 (ENSPSIG00000006426) #35	ENSPSIG00000000412	EIF3A (ENSPSIG00000006102) #36
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000163882	ENSGT00950000183145.E	ENSGT00950000183145.A.b.a	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00960000190376	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36
tuatara	DUPLICATION
tuatara	MODERN SPECIES	1695	HMX3 (ENSSPUG00000016381) #7	ACADSB (ENSSPUG00000016372) #8	IKZF5 (ENSSPUG00000016359) #9	PSTK (ENSSPUG00000016345) #10	ENSSPUG00000016310	C10orf88 (ENSSPUG00000016259) #11	ENSSPUG00000016067	HTRA1 (ENSSPUG00000015982) #16	PLEKHA1 (ENSSPUG00000015964) #17	ENSSPUG00000015948	BTBD16 (ENSSPUG00000015930) #18	ENSSPUG00000015863 #19	NSMCE4A (ENSSPUG00000015836) #20	ATE1 (ENSSPUG00000015827) #21	ENSSPUG00000015804 #22	ENSSPUG00000015788 #22	ENSSPUG00000015768 #23	ENSSPUG00000015757	ENSSPUG00000015750 #23
tuatara	MODERN SPECIES	1695	ENSSPUG00000016401	HMX3 (ENSSPUG00000016381) #7	ACADSB (ENSSPUG00000016372) #8	IKZF5 (ENSSPUG00000016359) #9	PSTK (ENSSPUG00000016345) #10	ENSSPUG00000016310	C10orf88 (ENSSPUG00000016259) #11	ENSSPUG00000016067	HTRA1 (ENSSPUG00000015982) #16	PLEKHA1 (ENSSPUG00000015964) #17	ENSSPUG00000015948	BTBD16 (ENSSPUG00000015930) #18	ENSSPUG00000015863 #19	NSMCE4A (ENSSPUG00000015836) #20	ATE1 (ENSSPUG00000015827) #21	ENSSPUG00000015804 #22	ENSSPUG00000015788 #22	ENSSPUG00000015768 #23	ENSSPUG00000015757	ENSSPUG00000015750 #23
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000163882	ENSGT00950000183145.E	ENSGT00950000183145.A.b.a	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Laterata	ANCESTRAL SPECIES		ENSGT00940000160392	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000154525.b.a #13	ENSGT00950000183145.C	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Common wall lizard	MODERN SPECIES	13	CUZD1 (ENSPMRG00000006167) #13	ENSPMRG00000006176	ENSPMRG00000006189	ENSPMRG00000006207	ENSPMRG00000006230	ENSPMRG00000006269	ENSPMRG00000006275	ENSPMRG00000006276	ENSPMRG00000006279	HTRA1 (ENSPMRG00000006287) #16	PLEKHA1 (ENSPMRG00000006289) #17	BTBD16 (ENSPMRG00000006301) #18	TACC2 (ENSPMRG00000006314) #19	ENSPMRG00000006364 #20	ATE1 (ENSPMRG00000006382) #21	FGFR2 (ENSPMRG00000006399) #22	WDR11 (ENSPMRG00000006420) #23	PLPP4 (ENSPMRG00000006469) #24	ENSPMRG00000006493	SEC23IP (ENSPMRG00000006499) #25	MCMBP (ENSPMRG00000006513) #26	INPP5F (ENSPMRG00000006527) #27	BAG3 (ENSPMRG00000006537) #29	ENSPMRG00000006541	RGS10 (ENSPMRG00000006569) #31	GRK5 (ENSPMRG00000006579) #32	PRDX3 (ENSPMRG00000006596) #33	ENSPMRG00000006605	EIF3A (ENSPMRG00000006618) #36	NANOS1 (ENSPMRG00000006637)	CACUL1 (ENSPMRG00000006643) #37
Argentine black and white tegu	MODERN SPECIES	65							ENSSMRG00000005559	ENSSMRG00000005555	ENSSMRG00000005553	HTRA1 (ENSSMRG00000005544) #16	PLEKHA1 (ENSSMRG00000005536) #17	BTBD16 (ENSSMRG00000005515) #18	TACC2 (ENSSMRG00000005489) #19	ENSSMRG00000005469	ATE1 (ENSSMRG00000005447) #21	FGFR2 (ENSSMRG00000005415) #22	WDR11 (ENSSMRG00000005374) #23	PLPP4 (ENSSMRG00000005367) #24	SEC23IP (ENSSMRG00000005344) #25	MCMBP (ENSSMRG00000004639) #26	INPP5F (ENSSMRG00000004622) #27	BAG3 (ENSSMRG00000004620) #29	TIAL1 (ENSSMRG00000004608) #30	ENSSMRG00000004590	GRK5 (ENSSMRG00000004549) #32	PRDX3 (ENSSMRG00000004533) #33	SFXN4 (ENSSMRG00000004528) #34	ENSSMRG00000004522	EIF3A (ENSSMRG00000003451) #36	NANOS1 (ENSSMRG00000003441)	CACUL1 (ENSSMRG00000003422) #37
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000163882	ENSGT00950000183145.E	ENSGT00950000183145.A.b.a	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000160482 #30	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Elapidae	ANCESTRAL SPECIES	4	ENSGT00940000158286 #7	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00940000166847	ENSGT00390000017384 #11	ENSGT00940000163882	ENSGT00950000183145.E	ENSGT00950000183145.A.b.a	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Indian cobra	MODERN SPECIES	3	ENSNNAG00000003842	C10orf88 (ENSNNAG00000003898) #11	ENSNNAG00000003929	ENSNNAG00000003976	ENSNNAG00000004497	ENSNNAG00000004527	ENSNNAG00000004649	ENSNNAG00000004671	ENSNNAG00000004693	HTRA1 (ENSNNAG00000004719) #16	PLEKHA1 (ENSNNAG00000004758) #17	BTBD16 (ENSNNAG00000004840) #18	TACC2 (ENSNNAG00000004956) #19	ENSNNAG00000005253	ATE1 (ENSNNAG00000005291) #21	FGFR2 (ENSNNAG00000005354) #22	WDR11 (ENSNNAG00000005498) #23	PLPP4 (ENSNNAG00000005540) #24	SEC23IP (ENSNNAG00000005588) #25	MCMBP (ENSNNAG00000005668) #26	INPP5F (ENSNNAG00000005737) #27	BAG3 (ENSNNAG00000005857) #29	ENSNNAG00000005871	RGS10 (ENSNNAG00000005939) #31	GRK5 (ENSNNAG00000005954) #32	PRDX3 (ENSNNAG00000006010) #33	ENSNNAG00000006052 #34	ENSNNAG00000006074	EIF3A (ENSNNAG00000006102) #36	NANOS1 (ENSNNAG00000006194)	CACUL1 (ENSNNAG00000006225) #37
Elapidae_a	ANCESTRAL SPECIES		ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000163882	ENSGT00950000183145.E	ENSGT01030000236508	ENSGT00940000154525.b.a #13	ENSGT00950000183145.A.b.a	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT01030000234641.a.b #34	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b	ENSGT00390000000403 #37
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00940000156525 #8	ENSGT00940000155035 #9	ENSGT00390000017554 #10	ENSGT00390000017384 #11	ENSGT00940000163882	ENSGT00950000183145.E	ENSGT01030000236508	ENSGT00940000154525.b.a #13	ENSGT00950000183145.A.b.a	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00940000161718 #18	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #24	ENSGT00940000156602 #25	ENSGT00390000017265 #26	ENSGT00940000155996 #27	ENSGT00940000159204 #29	ENSGT00940000154962.B	ENSGT00940000161426 #31	ENSGT00940000160702.b #32	ENSGT00940000153430.a.b #33	ENSGT00990000212952	ENSGT00940000168868	ENSGT00940000164222	ENSGT00730000111063 #36	ENSGT00950000183135.B.b
Mainland tiger snake	MODERN SPECIES		IKZF5 (ENSNSUG00000000891) #9	PSTK (ENSNSUG00000000895) #10	C10orf88 (ENSNSUG00000000899) #11	ENSNSUG00000000933	ENSNSUG00000000956	ENSNSUG00000000957	ENSNSUG00000000962 #13	ENSNSUG00000000967	HTRA1 (ENSNSUG00000000969) #16	PLEKHA1 (ENSNSUG00000000993) #17	BTBD16 (ENSNSUG00000000997) #18	ENSNSUG00000001027 #19	ENSNSUG00000001053	NSMCE4A (ENSNSUG00000001055) #20	ATE1 (ENSNSUG00000001059) #21	FGFR2 (ENSNSUG00000001069) #22	WDR11 (ENSNSUG00000001076) #23	ENSNSUG00000001085	PLPP4 (ENSNSUG00000001090) #24	ENSNSUG00000001093	SEC23IP (ENSNSUG00000001094) #25	MCMBP (ENSNSUG00000001099) #26	INPP5F (ENSNSUG00000001107) #27	BAG3 (ENSNSUG00000001865) #29	ENSNSUG00000001866	RGS10 (ENSNSUG00000001871) #31	GRK5 (ENSNSUG00000001907) #32	PRDX3 (ENSNSUG00000002052) #33	ENSNSUG00000002054	ENSNSUG00000002056	ENSNSUG00000002060
Eastern brown snake	MODERN SPECIES	25	IKZF5 (ENSPTXG00000011905) #9	PSTK (ENSPTXG00000011904) #10	ENSPTXG00000011903 #11	ENSPTXG00000011902	ENSPTXG00000011901	ENSPTXG00000011900	ENSPTXG00000011899	ENSPTXG00000011898	ENSPTXG00000011897	HTRA1 (ENSPTXG00000011896) #16	PLEKHA1 (ENSPTXG00000011895) #17	BTBD16 (ENSPTXG00000011894) #18	ENSPTXG00000011893 #19	NSMCE4A (ENSPTXG00000011892) #20	ATE1 (ENSPTXG00000011891) #21	FGFR2 (ENSPTXG00000011890) #22	WDR11 (ENSPTXG00000011888) #23	PLPP4 (ENSPTXG00000011887) #24	SEC23IP (ENSPTXG00000011814) #25	MCMBP (ENSPTXG00000011480) #26	INPP5F (ENSPTXG00000011471) #27	BAG3 (ENSPTXG00000011470) #29	ENSPTXG00000011468	RGS10 (ENSPTXG00000011466) #31	GRK5 (ENSPTXG00000011455) #32	PRDX3 (ENSPTXG00000011454) #33	ENSPTXG00000011452	ENSPTXG00000011451	EIF3A (ENSPTXG00000011448) #36	NANOS1 (ENSPTXG00000011447)	CACUL1 (ENSPTXG00000011446) #37
Blue-lipped sea krait	MODERN SPECIES	8984																FGFR2 (ENSLLTG00000013229) #22
Lizard	DUPLICATION
Lizard	MODERN SPECIES	1132		ENSACAG00000044689	ENSACAG00000036236	ENSACAG00000037885	ENSACAG00000038553	ENSACAG00000041102	ENSACAG00000006173	ENSACAG00000036258	ENSACAG00000038876	ENSACAG00000006319	ENSACAG00000039539	ENSACAG00000006391	ENSACAG00000028021	ENSACAG00000006467	ENSACAG00000006477	ENSACAG00000006492 #22	ENSACAG00000029516	ENSACAG00000024638	ENSACAG00000006498
Lizard	MODERN SPECIES	2	FANK1 (ENSACAG00000000847)	ADAM12 (ENSACAG00000000456)	ENSACAG00000038201	ENSACAG00000017425	ENSACAG00000045427	ENSACAG00000037899	HTRA1 (ENSACAG00000041971) #16	ENSACAG00000034636	PLEKHA1 (ENSACAG00000043979) #17	BTBD16 (ENSACAG00000029070) #18	ENSACAG00000018553	ENSACAG00000017293 #19	NSMCE4A (ENSACAG00000017278) #20	ATE1 (ENSACAG00000017242) #21	ENSACAG00000039358	FGFR2 (ENSACAG00000017206) #22	ENSACAG00000037188	ENSACAG00000035820	WDR11 (ENSACAG00000017159) #23	ENSACAG00000043757	ENSACAG00000044201	ENSACAG00000042985	PLPP4 (ENSACAG00000028997) #24	ENSACAG00000039703	SEC23IP (ENSACAG00000017131) #25	MCMBP (ENSACAG00000017098) #26	INPP5F (ENSACAG00000017047) #27	BAG3 (ENSACAG00000017032) #29	TIAL1 (ENSACAG00000016986) #30	RGS10 (ENSACAG00000034821) #31	ENSACAG00000037987
Anura	ANCESTRAL SPECIES	248								ENSGT00950000183145.A.b.a	ENSGT00940000163882.a.b	ENSGT00940000156955 #16	ENSGT00940000155157 #17	ENSGT00390000010398.A	ENSGT00940000157052 #19	ENSGT00390000011476 #20	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288.a #24
Frog	MODERN SPECIES	7	syce3 (ENSXETG00000040102)	styk1 (ENSXETG00000016240)	ENSXETG00000016241	gabarapl1 (ENSXETG00000016242)	ENSXETG00000034674	tas2r13 (ENSXETG00000015556)	t2r15 (ENSXETG00000035933)	dmbt1 (ENSXETG00000035743)	g6pc1.2 (ENSXETG00000015579)	htra1 (ENSXETG00000015580) #16	plekha1 (ENSXETG00000015586) #17	ENSXETG00000039419	tacc2 (ENSXETG00000015587) #19	XB5717875 [provisional:plac8] (ENSXETG00000015589) #20	ate1 (ENSXETG00000015591) #21	fgfr2 (ENSXETG00000015592) #22	wdr11 (ENSXETG00000015603) #23	plpp4 (ENSXETG00000009592) #24	oat (ENSXETG00000009576)	ENSXETG00000049094	chst15 (ENSXETG00000046777)	aplp1 (ENSXETG00000009571)	gpr26 (ENSXETG00000009569)	bub3 (ENSXETG00000009564)	hmx2 (ENSXETG00000027771)	hmx3 (ENSXETG00000009562) #7	acadsb (ENSXETG00000009561) #8	ENSXETG00000046532	ikzf5 (ENSXETG00000009559) #9	pstk (ENSXETG00000039097) #10	XB990656 [provisional:adam9] (ENSXETG00000031289)
Leishan spiny toad	MODERN SPECIES	9	HMX2 (ENSLLEG00000028332)	GBA2 (ENSLLEG00000028430)	HMX3 (ENSLLEG00000029455) #7	ACADSB (ENSLLEG00000029470) #8	IKZF5 (ENSLLEG00000029492) #9	PSTK (ENSLLEG00000029522) #10	ENSLLEG00000029534	ENSLLEG00000029566	ENSLLEG00000029588	HTRA1 (ENSLLEG00000029621) #16	TACC2 (ENSLLEG00000029844) #19	NSMCE4A (ENSLLEG00000030045) #20	ENSLLEG00000030064 #11	ATE1 (ENSLLEG00000030100) #21	ENSLLEG00000030118	FGFR2 (ENSLLEG00000030188) #22	ENSLLEG00000030468	ENSLLEG00000030474	WDR11 (ENSLLEG00000030484) #23	ENSLLEG00000030509 #24	ENSLLEG00000030520	TMEM52B (ENSLLEG00000030541)	ENSLLEG00000030548	ENSLLEG00000030564	STYK1 (ENSLLEG00000030581)	SYCE3 (ENSLLEG00000030602)	ENSLLEG00000030616	ENSLLEG00000030628	GSTK1 (ENSLLEG00000030638)	ENSLLEG00000030650	ENSLLEG00000030653