Mus	ANCESTRAL SPECIES		ENSGT00940000155035	ENSGT00390000017554	ENSGT00390000017384	ENSGT00940000164044.a	ENSGT00940000164044.b	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #15	ENSGT00940000155157 #16	ENSGT00940000161718 #17	ENSGT00940000157052 #18	ENSGT00390000011476 #19	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #25	ENSGT00940000156602.g.a #27	ENSGT00390000017265 #28	ENSGT00940000155996 #30	ENSGT00940000159204	ENSGT00940000160482	ENSGT00940000161426	ENSGT00390000003648	ENSGT00390000000050	ENSGT00940000160533	ENSGT00940000160447	ENSGT00390000009109	ENSGT01100000263552.h.b	ENSGT00940000162257
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000155035	ENSGT00390000017554	ENSGT00390000017384	ENSGT00940000164044.a	ENSGT00940000164044.b	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #15	ENSGT00940000155157 #16	ENSGT00940000161718 #17	ENSGT00940000157052 #18	ENSGT00390000011476 #19	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #25	ENSGT00940000156602.g.a #27	ENSGT00390000017265 #28	ENSGT00940000155996 #30	ENSGT00940000159204	ENSGT00940000160482	ENSGT00940000161426	ENSGT00390000003648	ENSGT00390000000050	ENSGT00940000160533	ENSGT00940000160447.c	ENSGT00940000160447.d	ENSGT00390000009109	ENSGT01100000263552.h.b
Mus_B	ANCESTRAL SPECIES		ENSGT00940000155035	ENSGT00390000017554	ENSGT00390000017384	ENSGT00940000164044.a	ENSGT00940000164044.b	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00950000183145.E	ENSGT00940000156955 #15	ENSGT00940000155157 #16	ENSGT00940000161718 #17	ENSGT00940000157052 #18	ENSGT00390000011476 #19	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #25	ENSGT00940000156602.g.a #27	ENSGT00390000017265 #28	ENSGT00940000155996 #30	ENSGT00940000159204	ENSGT00940000160482	ENSGT00940000161426	ENSGT00390000003648	ENSGT00390000000050	ENSGT00940000160533	ENSGT00940000160447.c	ENSGT00940000160447.d	ENSGT00390000009109	ENSGT01100000263552.h.b
Mus_C	ANCESTRAL SPECIES	14	ENSGT00940000156525	ENSGT00940000155035	ENSGT00390000017554	ENSGT00390000017384	ENSGT00940000164044.a	ENSGT00940000164044.b	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00940000156955 #15	ENSGT00940000155157 #16	ENSGT00940000161718 #17	ENSGT00940000157052 #18	ENSGT00390000011476 #19	ENSGT00500000044926 #21	ENSGT00940000155447 #22	ENSGT00390000004068 #23	ENSGT00940000158288 #25	ENSGT00940000156602.g.a #27	ENSGT00390000017265 #28	ENSGT00940000155996 #30	ENSGT00940000159204	ENSGT00940000160482	ENSGT00940000161426	ENSGT00390000003648	ENSGT00390000000050	ENSGT00940000160533	ENSGT00940000160447.c	ENSGT00940000160447.d	ENSGT00390000009109	ENSGT01100000263552.h.b
Steppe mouse	MODERN SPECIES	3190									Htra1 (ENSMSIG00000009092) #15	ENSMSIG00000008942 #16	Btbd16 (ENSMSIG00000008853) #17	Tacc2 (ENSMSIG00000008632) #18	Nsmce4a (ENSMSIG00000008558) #19	ENSMSIG00000008533 #20	Ate1 (ENSMSIG00000008300) #21	Fgfr2 (ENSMSIG00000007996) #22	Wdr11 (ENSMSIG00000007834) #23	ENSMSIG00000007803 #24	Plpp4 (ENSMSIG00000007743) #25	ENSMSIG00000007730 #26	Sec23ip (ENSMSIG00000007682) #27	Mcmbp (ENSMSIG00000007578) #28	ENSMSIG00000007565 #29	Inpp5f (ENSMSIG00000007462) #30	ENSMSIG00000007441 #31
spretus	MODERN SPECIES	16	Acadsb (MGP_SPRETEiJ_G0031684)	Ikzf5 (MGP_SPRETEiJ_G0031683)	Pstk (MGP_SPRETEiJ_G0031682)	2310057M21Rik (MGP_SPRETEiJ_G0031681)	Fam24a (MGP_SPRETEiJ_G0031680)	Fam24b (MGP_SPRETEiJ_G0031679)	Cuzd1 (MGP_SPRETEiJ_G0031678)	MGP_SPRETEiJ_G0031677	4933402N03Rik (MGP_SPRETEiJ_G0031676)	Htra1 (MGP_SPRETEiJ_G0031675) #15	Plekha1 (MGP_SPRETEiJ_G0031674) #16	Btbd16 (MGP_SPRETEiJ_G0031673) #17	Tacc2 (MGP_SPRETEiJ_G0031672) #18	Nsmce4a (MGP_SPRETEiJ_G0031671) #19	Ate1 (MGP_SPRETEiJ_G0031670) #21	Fgfr2 (MGP_SPRETEiJ_G0031669) #22	Wdr11 (MGP_SPRETEiJ_G0031668) #23	Plpp4 (MGP_SPRETEiJ_G0031667) #25	Sec23ip (MGP_SPRETEiJ_G0031666) #27	Mcmbp (MGP_SPRETEiJ_G0031665) #28	Inpp5f (MGP_SPRETEiJ_G0031664) #30	Bag3 (MGP_SPRETEiJ_G0031663)	Tial1 (MGP_SPRETEiJ_G0031662)	Rgs10 (MGP_SPRETEiJ_G0031661)	Rusf1 (MGP_SPRETEiJ_G0031660)	Slc5a2 (MGP_SPRETEiJ_G0031659)	MGP_SPRETEiJ_G0031658	MGP_SPRETEiJ_G0031657	Armc5 (MGP_SPRETEiJ_G0031656)	9130023H24Rik (MGP_SPRETEiJ_G0031655)	Cox6a2 (MGP_SPRETEiJ_G0031654)
Mouse	MODERN SPECIES	16	Ikzf5 (ENSMUSG00000040167)	Pstk (ENSMUSG00000063179)	2310057M21Rik (ENSMUSG00000040177)	Fam24a (ENSMUSG00000030859)	Fam24b (ENSMUSG00000030858)	Cuzd1 (ENSMUSG00000040205)	Cdcp3 (ENSMUSG00000006204)	4933402N03Rik (ENSMUSG00000013668)	Dmbt1 (ENSMUSG00000047517)	Htra1 (ENSMUSG00000006205) #15	Plekha1 (ENSMUSG00000040268) #16	Btbd16 (ENSMUSG00000040298) #17	Tacc2 (ENSMUSG00000030852) #18	Nsmce4a (ENSMUSG00000040331) #19	Ate1 (ENSMUSG00000030850) #21	Fgfr2 (ENSMUSG00000030849) #22	Wdr11 (ENSMUSG00000042055) #23	Plpp4 (ENSMUSG00000070366) #25	Sec23ip (ENSMUSG00000055319) #27	Mcmbp (ENSMUSG00000048170) #28	Inpp5f (ENSMUSG00000042105) #30	Bag3 (ENSMUSG00000030847)	Tial1 (ENSMUSG00000030846)	Rgs10 (ENSMUSG00000030844)	Rusf1 (ENSMUSG00000030780)	Slc5a2 (ENSMUSG00000030781)	Tgfb1i1 (ENSMUSG00000030782)	Armc5 (ENSMUSG00000042178)	9130023H24Rik (ENSMUSG00000062944)	Cox6a2 (ENSMUSG00000030785)	Itgad (ENSMUSG00000070369)
Ryukyu mouse	MODERN SPECIES	16	Acadsb (MGP_CAROLIEiJ_G0030570)	Ikzf5 (MGP_CAROLIEiJ_G0030569)	Pstk (MGP_CAROLIEiJ_G0030568)	2310057M21Rik (MGP_CAROLIEiJ_G0030567)	Fam24a (MGP_CAROLIEiJ_G0030566)	Fam24b (MGP_CAROLIEiJ_G0030565)	Cuzd1 (MGP_CAROLIEiJ_G0030564)	MGP_CAROLIEiJ_G0030563	4933402N03Rik (MGP_CAROLIEiJ_G0030562)	Htra1 (MGP_CAROLIEiJ_G0030561) #15	MGP_CAROLIEiJ_G0030560 #16	Btbd16 (MGP_CAROLIEiJ_G0030559) #17	Tacc2 (MGP_CAROLIEiJ_G0030558) #18	Nsmce4a (MGP_CAROLIEiJ_G0030557) #19	Ate1 (MGP_CAROLIEiJ_G0030556) #21	Fgfr2 (MGP_CAROLIEiJ_G0030555) #22	Wdr11 (MGP_CAROLIEiJ_G0030554) #23	Plpp4 (MGP_CAROLIEiJ_G0030553) #25	Sec23ip (MGP_CAROLIEiJ_G0030552) #27	Mcmbp (MGP_CAROLIEiJ_G0030551) #28	Inpp5f (MGP_CAROLIEiJ_G0030550) #30	Bag3 (MGP_CAROLIEiJ_G0030549)	Tial1 (MGP_CAROLIEiJ_G0030548)	Rgs10 (MGP_CAROLIEiJ_G0030547)	Rusf1 (MGP_CAROLIEiJ_G0030546)	Slc5a2 (MGP_CAROLIEiJ_G0030545)	MGP_CAROLIEiJ_G0030544	MGP_CAROLIEiJ_G0030543	Armc5 (MGP_CAROLIEiJ_G0030542)	9130023H24Rik (MGP_CAROLIEiJ_G0030541)	Cox6a2 (MGP_CAROLIEiJ_G0030540)
Shrew mouse	MODERN SPECIES		Acadsb (MGP_PahariEiJ_G0013777)	Ikzf5 (MGP_PahariEiJ_G0013776)	Pstk (MGP_PahariEiJ_G0013775)	2310057M21Rik (MGP_PahariEiJ_G0013774)	Fam24a (MGP_PahariEiJ_G0013773)	Fam24b (MGP_PahariEiJ_G0013772)	Cuzd1 (MGP_PahariEiJ_G0013771)	MGP_PahariEiJ_G0013770	4933402N03Rik (MGP_PahariEiJ_G0013769)	Htra1 (MGP_PahariEiJ_G0013768) #15	Plekha1 (MGP_PahariEiJ_G0013767) #16	Btbd16 (MGP_PahariEiJ_G0013766) #17	Tacc2 (MGP_PahariEiJ_G0013765) #18	Nsmce4a (MGP_PahariEiJ_G0013764) #19	Ate1 (MGP_PahariEiJ_G0013763) #21	Fgfr2 (MGP_PahariEiJ_G0013762) #22	Wdr11 (MGP_PahariEiJ_G0013761) #23	MGP_PahariEiJ_G0013760 #25	Sec23ip (MGP_PahariEiJ_G0013759) #27	Mcmbp (MGP_PahariEiJ_G0013758) #28	Inpp5f (MGP_PahariEiJ_G0013757) #30	Bag3 (MGP_PahariEiJ_G0013756)	Tial1 (MGP_PahariEiJ_G0013755)	Rgs10 (MGP_PahariEiJ_G0013754)	Rusf1 (MGP_PahariEiJ_G0013753)	Slc5a2 (MGP_PahariEiJ_G0013752)	MGP_PahariEiJ_G0013751	MGP_PahariEiJ_G0013750	Armc5 (MGP_PahariEiJ_G0013749)	9130023H24Rik (MGP_PahariEiJ_G0013748)	Cox6a2 (MGP_PahariEiJ_G0013747)