Mammalia	ANCESTRAL SPECIES	9	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000164059	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Theria	ANCESTRAL SPECIES	8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000164059	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Eutheria	ANCESTRAL SPECIES	3	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Glires	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Lesser Egyptian jerboa	MODERN SPECIES	62	Nup160 (ENSJJAG00000020091) #7	Fnbp4 (ENSJJAG00000009203) #8	Agbl2 (ENSJJAG00000022894) #9	Mtch2 (ENSJJAG00000011880) #10	C1qtnf4 (ENSJJAG00000023278) #11	Ndufs3 (ENSJJAG00000023557) #12	Kbtbd4 (ENSJJAG00000020543) #13	Celf1 (ENSJJAG00000020280) #14	Rapsn (ENSJJAG00000020297) #15	Psmc3 (ENSJJAG00000021354) #16	Slc39a13 (ENSJJAG00000007370) #17	Spi1 (ENSJJAG00000019221) #18	Mybpc3 (ENSJJAG00000018706) #19	Madd (ENSJJAG00000015606) #20	Nr1h3 (ENSJJAG00000020697) #21	Acp2 (ENSJJAG00000019515) #22	Ddb2 (ENSJJAG00000016552) #23	Pacsin3 (ENSJJAG00000023252) #24	Arfgap2 (ENSJJAG00000003129) #25	Cstpp1 (ENSJJAG00000008330) #26	Lrp4 (ENSJJAG00000014851) #27	Ckap5 (ENSJJAG00000023265) #28	F2 (ENSJJAG00000005619) #29	Zfp408 (ENSJJAG00000015381) #30	Arhgap1 (ENSJJAG00000022610) #31	Atg13 (ENSJJAG00000024173) #32	ENSJJAG00000015195 #33	ENSJJAG00000016975 #34	Ambra1 (ENSJJAG00000004138) #35	Chrm4 (ENSJJAG00000010466) #36	Mdk (ENSJJAG00000023305) #37
Muroidea	ANCESTRAL SPECIES	2	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Cricetidae_B	ANCESTRAL SPECIES	34	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Northern American deer mouse	MODERN SPECIES	17	Nup160 (ENSPEMG00000018101) #7	Fnbp4 (ENSPEMG00000016688) #8	Agbl2 (ENSPEMG00000001437) #9	Mtch2 (ENSPEMG00000010063) #10	C1qtnf4 (ENSPEMG00000024602) #11	Ndufs3 (ENSPEMG00000007248) #12	Kbtbd4 (ENSPEMG00000001992) #13	Ptpmt1 (ENSPEMG00000030250)	Celf1 (ENSPEMG00000015644) #14	Rapsn (ENSPEMG00000016952) #15	Slc39a13 (ENSPEMG00000016290) #17	Spi1 (ENSPEMG00000009647) #18	Mybpc3 (ENSPEMG00000009479) #19	Madd (ENSPEMG00000001264) #20	Nr1h3 (ENSPEMG00000018824) #21	Acp2 (ENSPEMG00000011860) #22	Ddb2 (ENSPEMG00000012899) #23	Pacsin3 (ENSPEMG00000018424) #24	Arfgap2 (ENSPEMG00000009220) #25	Cstpp1 (ENSPEMG00000018931) #26	Lrp4 (ENSPEMG00000015598) #27	Ckap5 (ENSPEMG00000007231) #28	F2 (ENSPEMG00000018118) #29	Zfp408 (ENSPEMG00000016757) #30	Arhgap1 (ENSPEMG00000011370) #31	Atg13 (ENSPEMG00000017021) #32	Harbi1 (ENSPEMG00000013606)	ENSPEMG00000025318	Ambra1 (ENSPEMG00000005111) #35	Chrm4 (ENSPEMG00000028345) #36	Mdk (ENSPEMG00000014123) #37
Prairie vole	MODERN SPECIES	81	Agbl2 (ENSMOCG00000015547) #9	Mtch2 (ENSMOCG00000001577) #10	C1qtnf4 (ENSMOCG00000013500) #11	Ndufs3 (ENSMOCG00000009375) #12	Kbtbd4 (ENSMOCG00000021780) #13	Ptpmt1 (ENSMOCG00000018913)	Celf1 (ENSMOCG00000012633) #14	Rapsn (ENSMOCG00000012267) #15	Psmc3 (ENSMOCG00000001464) #16	ENSMOCG00000006097 #17	ENSMOCG00000008195 #17	Spi1 (ENSMOCG00000006114) #18	Mybpc3 (ENSMOCG00000008344) #19	Madd (ENSMOCG00000003278) #20	Nr1h3 (ENSMOCG00000010671) #21	Acp2 (ENSMOCG00000002882) #22	Ddb2 (ENSMOCG00000021291) #23	Pacsin3 (ENSMOCG00000022577) #24	Arfgap2 (ENSMOCG00000016700) #25	Cstpp1 (ENSMOCG00000006672) #26	Lrp4 (ENSMOCG00000005823) #27	Ckap5 (ENSMOCG00000022214) #28	F2 (ENSMOCG00000019585) #29	Arhgap1 (ENSMOCG00000008533) #31	Atg13 (ENSMOCG00000018209) #32	ENSMOCG00000007253	Ambra1 (ENSMOCG00000018792) #35	Chrm4 (ENSMOCG00000016103) #36	Mdk (ENSMOCG00000014474) #37	Dgkz (ENSMOCG00000000694)	Creb3l1 (ENSMOCG00000012802)
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Chinese hamster chok1gshd	MODERN SPECIES	188	Fnbp4 (ENSCGRG00001022832) #8	Agbl2 (ENSCGRG00001000549) #9	Mtch2 (ENSCGRG00001024807) #10	C1qtnf4 (ENSCGRG00001007540) #11	Ndufs3 (ENSCGRG00001024136) #12	Kbtbd4 (ENSCGRG00001023919) #13	Ptpmt1 (ENSCGRG00001012152)	Celf1 (ENSCGRG00001011274) #14	Rapsn (ENSCGRG00001009650) #15	Psmc3 (ENSCGRG00001005657) #16	Slc39a13 (ENSCGRG00001003447) #17	Spi1 (ENSCGRG00001009684) #18	Mybpc3 (ENSCGRG00001006702) #19	Madd (ENSCGRG00001024681) #20	Nr1h3 (ENSCGRG00001022656) #21	Acp2 (ENSCGRG00001022138) #22	Ddb2 (ENSCGRG00001012939) #23	Pacsin3 (ENSCGRG00001011840) #24	Arfgap2 (ENSCGRG00001010700) #25	Cstpp1 (ENSCGRG00001020042) #26	Lrp4 (ENSCGRG00001018783) #27	Ckap5 (ENSCGRG00001013368) #28	F2 (ENSCGRG00001023426) #29	Zfp408 (ENSCGRG00001023588) #30	Arhgap1 (ENSCGRG00001023260) #31	ENSCGRG00001022859	Atg13 (ENSCGRG00001022112) #32	Harbi1 (ENSCGRG00001021313)	Ambra1 (ENSCGRG00001020313) #35	Chrm4 (ENSCGRG00001012019) #36	Mdk (ENSCGRG00001022566) #37
Golden Hamster	MODERN SPECIES	618	Nup160 (ENSMAUG00000009877) #7	Agbl2 (ENSMAUG00000013242) #9	Mtch2 (ENSMAUG00000009619) #10	C1qtnf4 (ENSMAUG00000009128) #11	Ndufs3 (ENSMAUG00000010036) #12	Kbtbd4 (ENSMAUG00000009694) #13	Ptpmt1 (ENSMAUG00000010436)	Celf1 (ENSMAUG00000009468) #14	Rapsn (ENSMAUG00000008690) #15	Psmc3 (ENSMAUG00000007346) #16	ENSMAUG00000009110 #17	Spi1 (ENSMAUG00000008854) #18	Mybpc3 (ENSMAUG00000008229) #19	Madd (ENSMAUG00000009156) #20	Nr1h3 (ENSMAUG00000008657) #21	Acp2 (ENSMAUG00000007767) #22	Ddb2 (ENSMAUG00000010179) #23	Pacsin3 (ENSMAUG00000009572) #24	Arfgap2 (ENSMAUG00000009218) #25	ENSMAUG00000008870	ENSMAUG00000008742	Cstpp1 (ENSMAUG00000008635) #26	Lrp4 (ENSMAUG00000016435) #27	Ckap5 (ENSMAUG00000012944) #28	F2 (ENSMAUG00000009414) #29	Arhgap1 (ENSMAUG00000012048) #31	Atg13 (ENSMAUG00000011052) #32	Harbi1 (ENSMAUG00000012193)	Ambra1 (ENSMAUG00000008821) #35	Chrm4 (ENSMAUG00000007510) #36	Mdk (ENSMAUG00000006759) #37
Murinae	ANCESTRAL SPECIES	1	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Mus	ANCESTRAL SPECIES	1	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Mus_A	ANCESTRAL SPECIES		ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.g #37
Mus_B	ANCESTRAL SPECIES	1	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.g #37
Mus_C	ANCESTRAL SPECIES		ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00960000189374	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.g #37
spretus	MODERN SPECIES	11	Nup160 (MGP_SPRETEiJ_G0024852) #7	Fnbp4 (MGP_SPRETEiJ_G0024853) #8	Agbl2 (MGP_SPRETEiJ_G0024854) #9	Mtch2 (MGP_SPRETEiJ_G0024855) #10	C1qtnf4 (MGP_SPRETEiJ_G0024856) #11	Ndufs3 (MGP_SPRETEiJ_G0024857) #12	Kbtbd4 (MGP_SPRETEiJ_G0024858) #13	Celf1 (MGP_SPRETEiJ_G0024859) #14	Rapsn (MGP_SPRETEiJ_G0024860) #15	Psmc3 (MGP_SPRETEiJ_G0024861) #16	Slc39a13 (MGP_SPRETEiJ_G0024862) #17	Spi1 (MGP_SPRETEiJ_G0024863) #18	Mybpc3 (MGP_SPRETEiJ_G0024864) #19	Madd (MGP_SPRETEiJ_G0024865) #20	Nr1h3 (MGP_SPRETEiJ_G0024866) #21	Acp2 (MGP_SPRETEiJ_G0024867) #22	Ddb2 (MGP_SPRETEiJ_G0024868) #23	Pacsin3 (MGP_SPRETEiJ_G0024869) #24	Arfgap2 (MGP_SPRETEiJ_G0024870) #25	Cstpp1 (MGP_SPRETEiJ_G0024871) #26	Lrp4 (MGP_SPRETEiJ_G0024872) #27	Ckap5 (MGP_SPRETEiJ_G0024873) #28	F2 (MGP_SPRETEiJ_G0024874) #29	Zfp408 (MGP_SPRETEiJ_G0024875) #30	Arhgap1 (MGP_SPRETEiJ_G0024876) #31	Atg13 (MGP_SPRETEiJ_G0024877) #32	Harbi1 (MGP_SPRETEiJ_G0024878)	Ambra1 (MGP_SPRETEiJ_G0024879) #35	Chrm4 (MGP_SPRETEiJ_G0024880) #36	Mdk (MGP_SPRETEiJ_G0024881) #37	Dgkz (MGP_SPRETEiJ_G0024882)
Steppe mouse	MODERN SPECIES	36	Agbl2 (ENSMSIG00000027703) #9	ENSMSIG00000027642 #10	C1qtnf4 (ENSMSIG00000027637) #11	Ndufs3 (ENSMSIG00000027630) #12	Kbtbd4 (ENSMSIG00000027623) #13	ENSMSIG00000027615	Celf1 (ENSMSIG00000027572) #14	ENSMSIG00000027554	Rapsn (ENSMSIG00000027530) #15	Psmc3 (ENSMSIG00000027459) #16	Slc39a13 (ENSMSIG00000027429) #17	Spi1 (ENSMSIG00000027421) #18	Mybpc3 (ENSMSIG00000027308) #19	Madd (ENSMSIG00000021063) #20	Nr1h3 (ENSMSIG00000020950) #21	Acp2 (ENSMSIG00000020936) #22	Ddb2 (ENSMSIG00000020921) #23	Pacsin3 (ENSMSIG00000020892) #24	Arfgap2 (ENSMSIG00000020760) #25	ENSMSIG00000020727 #26	ENSMSIG00000020721	Lrp4 (ENSMSIG00000020667) #27	ENSMSIG00000020658	Ckap5 (ENSMSIG00000020211) #28	F2 (ENSMSIG00000020083) #29	Zfp408 (ENSMSIG00000020068) #30	Arhgap1 (ENSMSIG00000020000) #31	Atg13 (ENSMSIG00000019915) #32	Harbi1 (ENSMSIG00000019911)	Ambra1 (ENSMSIG00000019820) #35	Chrm4 (ENSMSIG00000019816) #36
Mouse	MODERN SPECIES	11	Fnbp4 (ENSMUSG00000008200) #8	Agbl2 (ENSMUSG00000040812) #9	Mtch2 (ENSMUSG00000027282) #10	C1qtnf4 (ENSMUSG00000040794) #11	Ndufs3 (ENSMUSG00000005510) #12	Kbtbd4 (ENSMUSG00000005505) #13	Ptpmt1 (ENSMUSG00000063235)	Celf1 (ENSMUSG00000005506) #14	Rapsn (ENSMUSG00000002104) #15	Psmc3 (ENSMUSG00000002102) #16	Slc39a13 (ENSMUSG00000002105) #17	Spi1 (ENSMUSG00000002111) #18	Mybpc3 (ENSMUSG00000002100) #19	Madd (ENSMUSG00000040687) #20	Nr1h3 (ENSMUSG00000002108) #21	Acp2 (ENSMUSG00000002103) #22	Ddb2 (ENSMUSG00000002109) #23	Pacsin3 (ENSMUSG00000027257) #24	Arfgap2 (ENSMUSG00000027255) #25	Cstpp1 (ENSMUSG00000040591) #26	Lrp4 (ENSMUSG00000027253) #27	Ckap5 (ENSMUSG00000040549) #28	F2 (ENSMUSG00000027249) #29	Zfp408 (ENSMUSG00000075040) #30	Arhgap1 (ENSMUSG00000027247) #31	Atg13 (ENSMUSG00000027244) #32	Harbi1 (ENSMUSG00000027243)	Ambra1 (ENSMUSG00000040506) #35	Chrm4 (ENSMUSG00000040495) #36	Mdk (ENSMUSG00000027239) #37	Dgkz (ENSMUSG00000040479)
Ryukyu mouse	MODERN SPECIES	11	Nup160 (MGP_CAROLIEiJ_G0023941) #7	Fnbp4 (MGP_CAROLIEiJ_G0023942) #8	Agbl2 (MGP_CAROLIEiJ_G0023943) #9	Mtch2 (MGP_CAROLIEiJ_G0023944) #10	Madd (MGP_CAROLIEiJ_G0023945) #20	C1qtnf4 (MGP_CAROLIEiJ_G0023946) #11	Ndufs3 (MGP_CAROLIEiJ_G0023947) #12	Kbtbd4 (MGP_CAROLIEiJ_G0023948) #13	Celf1 (MGP_CAROLIEiJ_G0023949) #14	Rapsn (MGP_CAROLIEiJ_G0023950) #15	Psmc3 (MGP_CAROLIEiJ_G0023951) #16	Slc39a13 (MGP_CAROLIEiJ_G0023952) #17	Spi1 (MGP_CAROLIEiJ_G0023953) #18	Mybpc3 (MGP_CAROLIEiJ_G0023954) #19	Nr1h3 (MGP_CAROLIEiJ_G0023955) #21	Acp2 (MGP_CAROLIEiJ_G0023956) #22	Ddb2 (MGP_CAROLIEiJ_G0023957) #23	Pacsin3 (MGP_CAROLIEiJ_G0023958) #24	Arfgap2 (MGP_CAROLIEiJ_G0023959) #25	Cstpp1 (MGP_CAROLIEiJ_G0023960) #26	MGP_CAROLIEiJ_G0023961	Lrp4 (MGP_CAROLIEiJ_G0023962) #27	Ckap5 (MGP_CAROLIEiJ_G0023963) #28	F2 (MGP_CAROLIEiJ_G0023964) #29	Zfp408 (MGP_CAROLIEiJ_G0023965) #30	Arhgap1 (MGP_CAROLIEiJ_G0023966) #31	Atg13 (MGP_CAROLIEiJ_G0023967) #32	Harbi1 (MGP_CAROLIEiJ_G0023968)	Ambra1 (MGP_CAROLIEiJ_G0023969) #35	Chrm4 (MGP_CAROLIEiJ_G0023970) #36	Mdk (MGP_CAROLIEiJ_G0023971) #37
Shrew mouse	MODERN SPECIES	16	Nup160 (MGP_PahariEiJ_G0025378) #7	Fnbp4 (MGP_PahariEiJ_G0025379) #8	Agbl2 (MGP_PahariEiJ_G0025380) #9	Mtch2 (MGP_PahariEiJ_G0025381) #10	C1qtnf4 (MGP_PahariEiJ_G0025382) #11	Ndufs3 (MGP_PahariEiJ_G0025383) #12	Kbtbd4 (MGP_PahariEiJ_G0025384) #13	Celf1 (MGP_PahariEiJ_G0025385) #14	Rapsn (MGP_PahariEiJ_G0025386) #15	Psmc3 (MGP_PahariEiJ_G0025387) #16	Slc39a13 (MGP_PahariEiJ_G0025388) #17	Spi1 (MGP_PahariEiJ_G0025389) #18	Mybpc3 (MGP_PahariEiJ_G0025390) #19	Madd (MGP_PahariEiJ_G0025391) #20	Nr1h3 (MGP_PahariEiJ_G0025392) #21	Acp2 (MGP_PahariEiJ_G0025393) #22	Ddb2 (MGP_PahariEiJ_G0025394) #23	Pacsin3 (MGP_PahariEiJ_G0025395) #24	Arfgap2 (MGP_PahariEiJ_G0025396) #25	Cstpp1 (MGP_PahariEiJ_G0025397) #26	MGP_PahariEiJ_G0025398	Lrp4 (MGP_PahariEiJ_G0025399) #27	Ckap5 (MGP_PahariEiJ_G0025400) #28	F2 (MGP_PahariEiJ_G0025401) #29	Zfp408 (MGP_PahariEiJ_G0025402) #30	Arhgap1 (MGP_PahariEiJ_G0025403) #31	Atg13 (MGP_PahariEiJ_G0025404) #32	Harbi1 (MGP_PahariEiJ_G0025405)	Ambra1 (MGP_PahariEiJ_G0025406) #35	Chrm4 (MGP_PahariEiJ_G0025407) #36	Mdk (MGP_PahariEiJ_G0025408) #37
Rat	MODERN SPECIES	13	Fnbp4 (ENSRNOG00000007241) #8	Agbl2 (ENSRNOG00000008467) #9	Mtch2 (ENSRNOG00000058658) #10	C1qtnf4 (ENSRNOG00000069579) #11	Ndufs3 (ENSRNOG00000009155) #12	Kbtbd4 (ENSRNOG00000009397) #13	Ptpmt1 (ENSRNOG00000009723)	Celf1 (ENSRNOG00000010379) #14	Rapsn (ENSRNOG00000011208) #15	Psmc3 (ENSRNOG00000011414) #16	Slc39a13 (ENSRNOG00000011981) #17	Spi1 (ENSRNOG00000012172) #18	Mybpc3 (ENSRNOG00000012307) #19	Madd (ENSRNOG00000012568) #20	Nr1h3 (ENSRNOG00000013172) #21	Acp2 (ENSRNOG00000013594) #22	Ddb2 (ENSRNOG00000014071) #23	Pacsin3 (ENSRNOG00000014204) #24	Arfgap2 (ENSRNOG00000014429) #25	Cstpp1 (ENSRNOG00000014798) #26	Lrp4 (ENSRNOG00000015285) #27	Ckap5 (ENSRNOG00000016067) #28	F2 (ENSRNOG00000016325) #29	ENSRNOG00000070459 #30	Arhgap1 (ENSRNOG00000016610) #31	Atg13 (ENSRNOG00000016984) #32	Ambra1 (ENSRNOG00000017422) #35	Chrm4 (ENSRNOG00000017556) #36	Mdk (ENSRNOG00000017560) #37	Dgkz (ENSRNOG00000017737)	Creb3l1 (ENSRNOG00000005413)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1238	Agbl2 (ENSNGAG00000000234) #9	Mtch2 (ENSNGAG00000003094) #10	C1qtnf4 (ENSNGAG00000009680) #11	Ndufs3 (ENSNGAG00000012046) #12	Kbtbd4 (ENSNGAG00000000276) #13	Ptpmt1 (ENSNGAG00000017776)	ENSNGAG00000018260	Celf1 (ENSNGAG00000017390) #14	Rapsn (ENSNGAG00000007295) #15	Psmc3 (ENSNGAG00000017843) #16	Slc39a13 (ENSNGAG00000017536) #17	Spi1 (ENSNGAG00000010713) #18	Mybpc3 (ENSNGAG00000000260) #19	Madd (ENSNGAG00000017768) #20	Nr1h3 (ENSNGAG00000015402) #21	Acp2 (ENSNGAG00000007455) #22	Ddb2 (ENSNGAG00000017336) #23	Pacsin3 (ENSNGAG00000014205) #24	Arfgap2 (ENSNGAG00000009124) #25	Cstpp1 (ENSNGAG00000000171) #26	Lrp4 (ENSNGAG00000020436) #27	Ckap5 (ENSNGAG00000001579) #28	F2 (ENSNGAG00000010351) #29	Zfp408 (ENSNGAG00000000309) #30	Arhgap1 (ENSNGAG00000013969) #31	Atg13 (ENSNGAG00000015785) #32	ENSNGAG00000012504 #33
Kangaroo rat	MODERN SPECIES	444	Nup160 (ENSDORG00000004246) #7	Fnbp4 (ENSDORG00000004245) #8	Agbl2 (ENSDORG00000025903) #9	Mtch2 (ENSDORG00000001511) #10	C1qtnf4 (ENSDORG00000015597) #11	Kbtbd4 (ENSDORG00000015593) #13	Ptpmt1 (ENSDORG00000015591)	Celf1 (ENSDORG00000013721) #14	Rapsn (ENSDORG00000000757) #15	Psmc3 (ENSDORG00000000756) #16	Slc39a13 (ENSDORG00000000753) #17	Spi1 (ENSDORG00000007758) #18	Mybpc3 (ENSDORG00000007751) #19	Madd (ENSDORG00000007749) #20	Nr1h3 (ENSDORG00000007747) #21	Acp2 (ENSDORG00000007743) #22	Ddb2 (ENSDORG00000007741) #23	ENSDORG00000013060 #24	Arfgap2 (ENSDORG00000013057) #25	Cstpp1 (ENSDORG00000013052) #26	Lrp4 (ENSDORG00000001785) #27	Ckap5 (ENSDORG00000011373) #28	F2 (ENSDORG00000029579) #29	Zfp408 (ENSDORG00000000387) #30	Arhgap1 (ENSDORG00000000385) #31	Atg13 (ENSDORG00000000382) #32	ENSDORG00000028941	Ambra1 (ENSDORG00000008382) #35	Chrm4 (ENSDORG00000024984) #36	Mdk (ENSDORG00000029447) #37	Dgkz (ENSDORG00000008377)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Marmotini	ANCESTRAL SPECIES	22	ENSGT00940000160201 #9	ENSGT00390000000020.b.e #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Marmotini_b	ANCESTRAL SPECIES	23	ENSGT00940000160201 #9	ENSGT00390000000020.b.e #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Arctic ground squirrel	MODERN SPECIES	208	MTCH2 (ENSUPAG00010014096) #10	C1QTNF4 (ENSUPAG00010014090) #11	FAM180B (ENSUPAG00010014076)	NDUFS3 (ENSUPAG00010014067) #12	KBTBD4 (ENSUPAG00010014056) #13	ENSUPAG00010014045	CELF1 (ENSUPAG00010013973) #14	RAPSN (ENSUPAG00010013926) #15	PSMC3 (ENSUPAG00010013908) #16	SLC39A13 (ENSUPAG00010013855) #17	SPI1 (ENSUPAG00010013850) #18	ENSUPAG00010013841	MYBPC3 (ENSUPAG00010013812) #19	MADD (ENSUPAG00010011229) #20	NR1H3 (ENSUPAG00010011188) #21	ACP2 (ENSUPAG00010011162) #22	DDB2 (ENSUPAG00010011149) #23	PACSIN3 (ENSUPAG00010011141) #24	ARFGAP2 (ENSUPAG00010011117) #25	CSTPP1 (ENSUPAG00010011093) #26	LRP4 (ENSUPAG00010011049) #27	CKAP5 (ENSUPAG00010010730) #28	F2 (ENSUPAG00010010714) #29	ZNF408 (ENSUPAG00010010704) #30	ARHGAP1 (ENSUPAG00010010696) #31	ATG13 (ENSUPAG00010010621) #32	HARBI1 (ENSUPAG00010010611)	AMBRA1 (ENSUPAG00010010430) #35	CHRM4 (ENSUPAG00010010417) #36	MDK (ENSUPAG00010010379) #37	DGKZ (ENSUPAG00010010211)
Squirrel	MODERN SPECIES	162	AGBL2 (ENSSTOG00000003491) #9	ENSSTOG00000028441 #10	C1QTNF4 (ENSSTOG00000024273) #11	FAM180B (ENSSTOG00000000628)	NDUFS3 (ENSSTOG00000000622) #12	KBTBD4 (ENSSTOG00000020864) #13	PTPMT1 (ENSSTOG00000019770)	CELF1 (ENSSTOG00000000613) #14	RAPSN (ENSSTOG00000011047) #15	PSMC3 (ENSSTOG00000011038) #16	SLC39A13 (ENSSTOG00000027722) #17	SPI1 (ENSSTOG00000022735) #18	MYBPC3 (ENSSTOG00000026473) #19	MADD (ENSSTOG00000007626) #20	NR1H3 (ENSSTOG00000007611) #21	ACP2 (ENSSTOG00000007586) #22	DDB2 (ENSSTOG00000007571) #23	PACSIN3 (ENSSTOG00000007547) #24	ARFGAP2 (ENSSTOG00000007524) #25	CSTPP1 (ENSSTOG00000007512) #26	LRP4 (ENSSTOG00000005236) #27	CKAP5 (ENSSTOG00000005158) #28	F2 (ENSSTOG00000005130) #29	ZNF408 (ENSSTOG00000005114) #30	ARHGAP1 (ENSSTOG00000026557) #31	ATG13 (ENSSTOG00000005077) #32	HARBI1 (ENSSTOG00000005072)	AMBRA1 (ENSSTOG00000019411) #35	CHRM4 (ENSSTOG00000022455) #36	MDK (ENSSTOG00000027636) #37	DGKZ (ENSSTOG00000012704)
Alpin marmot	MODERN SPECIES	3	ENSMMMG00000015743	ENSMMMG00000015697 #9	ENSMMMG00000015683 #10	FAM180B (ENSMMMG00000015675)	NDUFS3 (ENSMMMG00000015667) #12	KBTBD4 (ENSMMMG00000015654) #13	ENSMMMG00000015652	CELF1 (ENSMMMG00000015346) #14	RAPSN (ENSMMMG00000015294) #15	PSMC3 (ENSMMMG00000015270) #16	SLC39A13 (ENSMMMG00000015224) #17	SPI1 (ENSMMMG00000015212) #18	MYBPC3 (ENSMMMG00000015189) #19	MADD (ENSMMMG00000014606) #20	NR1H3 (ENSMMMG00000014541) #21	ACP2 (ENSMMMG00000014527) #22	DDB2 (ENSMMMG00000014518) #23	PACSIN3 (ENSMMMG00000014498) #24	ARFGAP2 (ENSMMMG00000014424) #25	CSTPP1 (ENSMMMG00000014382) #26	LRP4 (ENSMMMG00000014335) #27	CKAP5 (ENSMMMG00000013993) #28	F2 (ENSMMMG00000013961) #29	ZNF408 (ENSMMMG00000013944) #30	ARHGAP1 (ENSMMMG00000013934) #31	ATG13 (ENSMMMG00000013875) #32	HARBI1 (ENSMMMG00000013860)	AMBRA1 (ENSMMMG00000013284) #35	CHRM4 (ENSMMMG00000013278) #36	MDK (ENSMMMG00000013259) #37	DGKZ (ENSMMMG00000013155)
Eurasian red squirrel	MODERN SPECIES	2	FAM180B (ENSSVLG00005009289)	NDUFS3 (ENSSVLG00005009316) #12	KBTBD4 (ENSSVLG00005009359) #13	PTPMT1 (ENSSVLG00005009417)	CELF1 (ENSSVLG00005009492) #14	RAPSN (ENSSVLG00005009920) #15	ENSSVLG00005009993 #16	ENSSVLG00005010167 #17	ENSSVLG00005010225 #16	ENSSVLG00005010302 #17	SPI1 (ENSSVLG00005010597) #18	MYBPC3 (ENSSVLG00005010729) #19	MADD (ENSSVLG00005011762) #20	ENSSVLG00005012055	NR1H3 (ENSSVLG00005012159) #21	ACP2 (ENSSVLG00005012397) #22	DDB2 (ENSSVLG00005012634) #23	PACSIN3 (ENSSVLG00005013010) #24	ARFGAP2 (ENSSVLG00005013354) #25	CSTPP1 (ENSSVLG00005013495) #26	LRP4 (ENSSVLG00005013702) #27	CKAP5 (ENSSVLG00005013939) #28	F2 (ENSSVLG00005014116) #29	ARHGAP1 (ENSSVLG00005014685) #31	ENSSVLG00005014869 #32	HARBI1 (ENSSVLG00005015510)	AMBRA1 (ENSSVLG00005015569) #35	CHRM4 (ENSSVLG00005015740) #36	MDK (ENSSVLG00005015782) #37	DGKZ (ENSSVLG00005015887)	ENSSVLG00005015926
Hystricomorpha	ANCESTRAL SPECIES	16	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152	ENSGT00860000136066
Hystricomorpha_a	ANCESTRAL SPECIES	12	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152	ENSGT00860000136066
Guinea pig	MODERN SPECIES	72	FNBP4 (ENSCPOG00000000320) #8	AGBL2 (ENSCPOG00000003935) #9	MTCH2 (ENSCPOG00000006293) #10	C1QTNF4 (ENSCPOG00000023948) #11	NDUFS3 (ENSCPOG00000006141) #12	KBTBD4 (ENSCPOG00000019448) #13	PTPMT1 (ENSCPOG00000031147)	CELF1 (ENSCPOG00000036381) #14	RAPSN (ENSCPOG00000015456) #15	PSMC3 (ENSCPOG00000008176) #16	SLC39A13 (ENSCPOG00000008169) #17	SPI1 (ENSCPOG00000022138) #18	MYBPC3 (ENSCPOG00000013368) #19	MADD (ENSCPOG00000013364) #20	NR1H3 (ENSCPOG00000013362) #21	ACP2 (ENSCPOG00000013359) #22	DDB2 (ENSCPOG00000013358) #23	PACSIN3 (ENSCPOG00000013356) #24	ARFGAP2 (ENSCPOG00000013352) #25	CSTPP1 (ENSCPOG00000020334) #26	LRP4 (ENSCPOG00000007072) #27	CKAP5 (ENSCPOG00000007054) #28	F2 (ENSCPOG00000026682) #29	ARHGAP1 (ENSCPOG00000013046) #31	ATG13 (ENSCPOG00000013042) #32	HARBI1 (ENSCPOG00000037304)	AMBRA1 (ENSCPOG00000007341) #35	CHRM4 (ENSCPOG00000020788) #36	MDK (ENSCPOG00000007340) #37	DGKZ (ENSCPOG00000009636)	CREB3L1 (ENSCPOG00000010073)
Hystricomorpha_b	ANCESTRAL SPECIES	10	ENSGT00390000000972 #7	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152	ENSGT00860000136066
Long-tailed chinchilla	MODERN SPECIES	129	PTPRJ (ENSCLAG00000015568)	NUP160 (ENSCLAG00000015457) #7	FNBP4 (ENSCLAG00000014534) #8	MTCH2 (ENSCLAG00000012026) #10	C1QTNF4 (ENSCLAG00000015186) #11	NDUFS3 (ENSCLAG00000014873) #12	KBTBD4 (ENSCLAG00000016255) #13	CELF1 (ENSCLAG00000011791) #14	RAPSN (ENSCLAG00000015497) #15	PSMC3 (ENSCLAG00000013916) #16	SLC39A13 (ENSCLAG00000014480) #17	SPI1 (ENSCLAG00000017201) #18	MYBPC3 (ENSCLAG00000015418) #19	MADD (ENSCLAG00000012503) #20	NR1H3 (ENSCLAG00000013563) #21	ACP2 (ENSCLAG00000014608) #22	DDB2 (ENSCLAG00000016473) #23	ENSCLAG00000012709 #24	ARFGAP2 (ENSCLAG00000016467) #25	CSTPP1 (ENSCLAG00000014110) #26	LRP4 (ENSCLAG00000016159) #27	CKAP5 (ENSCLAG00000015801) #28	F2 (ENSCLAG00000015618) #29	ARHGAP1 (ENSCLAG00000013542) #31	ATG13 (ENSCLAG00000015328) #32	HARBI1 (ENSCLAG00000013578)	AMBRA1 (ENSCLAG00000015156) #35	CHRM4 (ENSCLAG00000013251) #36	MDK (ENSCLAG00000014462) #37	DGKZ (ENSCLAG00000016057)	ENSCLAG00000014194
Degu	MODERN SPECIES	59	PTPRJ (ENSODEG00000016025)	NUP160 (ENSODEG00000015381) #7	FNBP4 (ENSODEG00000016574) #8	AGBL2 (ENSODEG00000016111) #9	MTCH2 (ENSODEG00000015416) #10	NDUFS3 (ENSODEG00000015948) #12	KBTBD4 (ENSODEG00000015830) #13	CELF1 (ENSODEG00000015204) #14	RAPSN (ENSODEG00000015194) #15	ENSODEG00000016550 #16	SLC39A13 (ENSODEG00000015895) #17	SPI1 (ENSODEG00000015369) #18	MYBPC3 (ENSODEG00000016030) #19	MADD (ENSODEG00000017645) #20	NR1H3 (ENSODEG00000016180) #21	ACP2 (ENSODEG00000015528) #22	ENSODEG00000015965 #24	ENSODEG00000016456 #25	CSTPP1 (ENSODEG00000016656) #26	LRP4 (ENSODEG00000015720) #27	CKAP5 (ENSODEG00000016409) #28	F2 (ENSODEG00000016157) #29	ARHGAP1 (ENSODEG00000016156) #31	ATG13 (ENSODEG00000017294) #32	ENSODEG00000016339	AMBRA1 (ENSODEG00000016633) #35	CHRM4 (ENSODEG00000020352) #36	MDK (ENSODEG00000015931) #37	DGKZ (ENSODEG00000016309)	ENSODEG00000016420	ENSODEG00000016039
Naked mole-rat female	MODERN SPECIES	14	ENSHGLG00000039374	ENSHGLG00000008506	ENSHGLG00000043784	MTCH2 (ENSHGLG00000017536) #10	FAM180B (ENSHGLG00000038229)	NDUFS3 (ENSHGLG00000018368) #12	KBTBD4 (ENSHGLG00000047234) #13	ENSHGLG00000037048	ENSHGLG00000006909 #14	RAPSN (ENSHGLG00000008521) #15	PSMC3 (ENSHGLG00000005713) #16	SLC39A13 (ENSHGLG00000041087) #17	ENSHGLG00000011456 #18	ENSHGLG00000044290 #19	NR1H3 (ENSHGLG00000014541) #21	ENSHGLG00000036516 #22	DDB2 (ENSHGLG00000018689) #23	ENSHGLG00000040462 #25	CSTPP1 (ENSHGLG00000018725) #26	ARHGAP1 (ENSHGLG00000017685) #31	ENSHGLG00000013428 #32	ENSHGLG00000018447	AMBRA1 (ENSHGLG00000017564) #35	ENSHGLG00000034290	ENSHGLG00000042531	ENSHGLG00000032476	CREB3L1 (ENSHGLG00000048284)	ENSHGLG00000033741	ENSHGLG00000037709	ENSHGLG00000050302	ENSHGLG00000032419
Lagomorpha	ANCESTRAL SPECIES	4	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000164059	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00940000156152	ENSGT00940000159848
Rabbit	MODERN SPECIES		FNBP4 (ENSOCUG00000017534) #8	AGBL2 (ENSOCUG00000017524) #9	MTCH2 (ENSOCUG00000006368) #10	C1QTNF4 (ENSOCUG00000006365) #11	FAM180B (ENSOCUG00000006361)	NDUFS3 (ENSOCUG00000006359) #12	KBTBD4 (ENSOCUG00000006353) #13	PTPMT1 (ENSOCUG00000021229)	CELF1 (ENSOCUG00000001311) #14	RAPSN (ENSOCUG00000008892) #15	PSMC3 (ENSOCUG00000026980) #16	SLC39A13 (ENSOCUG00000005557) #17	MYBPC3 (ENSOCUG00000002112) #19	MADD (ENSOCUG00000002099) #20	NR1H3 (ENSOCUG00000002095) #21	ACP2 (ENSOCUG00000013342) #22	DDB2 (ENSOCUG00000002076) #23	PACSIN3 (ENSOCUG00000027715) #24	ENSOCUG00000002073 #25	CSTPP1 (ENSOCUG00000002066) #26	LRP4 (ENSOCUG00000002052) #27	CKAP5 (ENSOCUG00000016200) #28	ZNF408 (ENSOCUG00000010953) #30	ARHGAP1 (ENSOCUG00000016160) #31	ATG13 (ENSOCUG00000016144) #32	HARBI1 (ENSOCUG00000016137)	AMBRA1 (ENSOCUG00000016117) #35	CHRM4 (ENSOCUG00000021064) #36	ENSOCUG00000024752	CREB3L1 (ENSOCUG00000004418)	PHF21A (ENSOCUG00000001675)
Pika	MODERN SPECIES	3586													MYBPC3 (ENSOPRG00000009569) #19	MADD (ENSOPRG00000009509) #20	NR1H3 (ENSOPRG00000009497) #21	ACP2 (ENSOPRG00000009485) #22	DDB2 (ENSOPRG00000009468) #23	PACSIN3 (ENSOPRG00000009451) #24	ARFGAP2 (ENSOPRG00000009432) #25	CSTPP1 (ENSOPRG00000009417) #26	LRP4 (ENSOPRG00000009347) #27	CKAP5 (ENSOPRG00000009287) #28	ENSOPRG00000009249	ZNF408 (ENSOPRG00000009225) #30	ARHGAP1 (ENSOPRG00000009201) #31	ATG13 (ENSOPRG00000009172) #32
Tree shrew	MODERN SPECIES	1561												ENSTBEG00000001919 #18	MYBPC3 (ENSTBEG00000000966) #19	MADD (ENSTBEG00000000554) #20	NR1H3 (ENSTBEG00000000492) #21	ACP2 (ENSTBEG00000000444) #22	DDB2 (ENSTBEG00000000275) #23
Primates	ANCESTRAL SPECIES		ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.b #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.b #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.b #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.b #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	20	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.b #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.b #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Pan	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.b #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00390000003248.a.b.a.b	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Bonobo	MODERN SPECIES	2	AGBL2 (ENSPPAG00000006927) #9	MTCH2 (ENSPPAG00000042054) #10	ENSPPAG00000041168 #11	FAM180B (ENSPPAG00000030975)	NDUFS3 (ENSPPAG00000031162) #12	KBTBD4 (ENSPPAG00000031866) #13	PTPMT1 (ENSPPAG00000040774)	CELF1 (ENSPPAG00000033870) #14	RAPSN (ENSPPAG00000042512) #15	PSMC3 (ENSPPAG00000042401) #16	SLC39A13 (ENSPPAG00000042717) #17	SPI1 (ENSPPAG00000036814) #18	MYBPC3 (ENSPPAG00000030985) #19	MADD (ENSPPAG00000043339) #20	NR1H3 (ENSPPAG00000039033) #21	ACP2 (ENSPPAG00000042373) #22	DDB2 (ENSPPAG00000000958) #23	ENSPPAG00000021284	PACSIN3 (ENSPPAG00000040614) #24	ARFGAP2 (ENSPPAG00000030940) #25	CSTPP1 (ENSPPAG00000040870) #26	LRP4 (ENSPPAG00000043379) #27	CKAP5 (ENSPPAG00000030676) #28	F2 (ENSPPAG00000041509) #29	ZNF408 (ENSPPAG00000034993) #30	ARHGAP1 (ENSPPAG00000027953) #31	ATG13 (ENSPPAG00000042268) #32	HARBI1 (ENSPPAG00000035636)	AMBRA1 (ENSPPAG00000034195) #35	CHRM4 (ENSPPAG00000025475) #36	MDK (ENSPPAG00000023561) #37
Chimpanzee	MODERN SPECIES	2	FNBP4 (ENSPTRG00000003575) #8	AGBL2 (ENSPTRG00000003574) #9	MTCH2 (ENSPTRG00000003573) #10	FAM180B (ENSPTRG00000023838)	NDUFS3 (ENSPTRG00000003571) #12	KBTBD4 (ENSPTRG00000003570) #13	PTPMT1 (ENSPTRG00000033944)	CELF1 (ENSPTRG00000052299) #14	RAPSN (ENSPTRG00000003567) #15	PSMC3 (ENSPTRG00000003565) #16	SLC39A13 (ENSPTRG00000003564) #17	SPI1 (ENSPTRG00000003563) #18	MYBPC3 (ENSPTRG00000003562) #19	MADD (ENSPTRG00000003561) #20	NR1H3 (ENSPTRG00000003560) #21	ACP2 (ENSPTRG00000003559) #22	DDB2 (ENSPTRG00000003558) #23	ENSPTRG00000045675	PACSIN3 (ENSPTRG00000003557) #24	ARFGAP2 (ENSPTRG00000003556) #25	CSTPP1 (ENSPTRG00000003555) #26	LRP4 (ENSPTRG00000003554) #27	CKAP5 (ENSPTRG00000003553) #28	F2 (ENSPTRG00000003552) #29	ZNF408 (ENSPTRG00000003551) #30	ARHGAP1 (ENSPTRG00000003550) #31	ATG13 (ENSPTRG00000003549) #32	HARBI1 (ENSPTRG00000003548)	ENSPTRG00000043648	AMBRA1 (ENSPTRG00000003546) #35	CHRM4 (ENSPTRG00000038696) #36
Human	MODERN SPECIES	2	AGBL2 (ENSG00000165923) #9	MTCH2 (ENSG00000109919) #10	C1QTNF4 (ENSG00000172247) #11	FAM180B (ENSG00000196666)	KBTBD4 (ENSG00000123444) #13	PTPMT1 (ENSG00000110536)	NDUFS3 (ENSG00000213619) #12	CELF1 (ENSG00000149187) #14	RAPSN (ENSG00000165917) #15	PSMC3 (ENSG00000165916) #16	SLC39A13 (ENSG00000165915) #17	SPI1 (ENSG00000066336) #18	MYBPC3 (ENSG00000134571) #19	MADD (ENSG00000110514) #20	NR1H3 (ENSG00000025434) #21	ACP2 (ENSG00000134575) #22	DDB2 (ENSG00000134574) #23	PACSIN3 (ENSG00000165912) #24	ARFGAP2 (ENSG00000149182) #25	CSTPP1 (ENSG00000149179) #26	LRP4 (ENSG00000134569) #27	CKAP5 (ENSG00000175216) #28	F2 (ENSG00000180210) #29	ZNF408 (ENSG00000175213) #30	ARHGAP1 (ENSG00000175220) #31	ATG13 (ENSG00000175224) #32	HARBI1 (ENSG00000180423)	AMBRA1 (ENSG00000110497) #35	CHRM4 (ENSG00000180720) #36	MDK (ENSG00000110492) #37	DGKZ (ENSG00000149091)
Gorilla	MODERN SPECIES	2	FNBP4 (ENSGGOG00000014374) #8	AGBL2 (ENSGGOG00000014354) #9	MTCH2 (ENSGGOG00000008281) #10	FAM180B (ENSGGOG00000014401)	NDUFS3 (ENSGGOG00000014393) #12	KBTBD4 (ENSGGOG00000013959) #13	PTPMT1 (ENSGGOG00000013954)	CELF1 (ENSGGOG00000004106) #14	RAPSN (ENSGGOG00000007325) #15	PSMC3 (ENSGGOG00000016530) #16	SLC39A13 (ENSGGOG00000016524) #17	SPI1 (ENSGGOG00000006485) #18	MYBPC3 (ENSGGOG00000006471) #19	MADD (ENSGGOG00000008588) #20	NR1H3 (ENSGGOG00000008583) #21	ACP2 (ENSGGOG00000008576) #22	DDB2 (ENSGGOG00000008569) #23	PACSIN3 (ENSGGOG00000008566) #24	ARFGAP2 (ENSGGOG00000008555) #25	CSTPP1 (ENSGGOG00000008547) #26	LRP4 (ENSGGOG00000001024) #27	CKAP5 (ENSGGOG00000006980) #28	F2 (ENSGGOG00000006967) #29	ZNF408 (ENSGGOG00000010152) #30	ARHGAP1 (ENSGGOG00000005697) #31	ATG13 (ENSGGOG00000005689) #32	HARBI1 (ENSGGOG00000004410)	AMBRA1 (ENSGGOG00000011880) #35	CHRM4 (ENSGGOG00000026871) #36	MDK (ENSGGOG00000011872) #37	DGKZ (ENSGGOG00000011849)
Orangutan	MODERN SPECIES	2	AGBL2 (ENSPPYG00000003295) #9	MTCH2 (ENSPPYG00000003296) #10	ENSPPYG00000038525 #11	FAM180B (ENSPPYG00000040243)	NDUFS3 (ENSPPYG00000003299) #12	KBTBD4 (ENSPPYG00000003300) #13	PTPMT1 (ENSPPYG00000003301)	CELF1 (ENSPPYG00000003302) #14	RAPSN (ENSPPYG00000003303) #15	PSMC3 (ENSPPYG00000003304) #16	SLC39A13 (ENSPPYG00000003305) #17	SPI1 (ENSPPYG00000003306) #18	MYBPC3 (ENSPPYG00000003307) #19	MADD (ENSPPYG00000003308) #20	NR1H3 (ENSPPYG00000003309) #21	ACP2 (ENSPPYG00000003310) #22	DDB2 (ENSPPYG00000003311) #23	PACSIN3 (ENSPPYG00000003312) #24	ARFGAP2 (ENSPPYG00000003313) #25	CSTPP1 (ENSPPYG00000003314) #26	LRP4 (ENSPPYG00000003315) #27	CKAP5 (ENSPPYG00000003316) #28	F2 (ENSPPYG00000003317) #29	ZNF408 (ENSPPYG00000003318) #30	ARHGAP1 (ENSPPYG00000003319) #31	ATG13 (ENSPPYG00000003320) #32	HARBI1 (ENSPPYG00000003321)	AMBRA1 (ENSPPYG00000003322) #35	CHRM4 (ENSPPYG00000029365) #36	ENSPPYG00000038515 #37	DGKZ (ENSPPYG00000003323)
Gibbon	MODERN SPECIES	5	AGBL2 (ENSNLEG00000014711) #9	MTCH2 (ENSNLEG00000034575) #10	ENSNLEG00000014694	NDUFS3 (ENSNLEG00000028559) #12	KBTBD4 (ENSNLEG00000014672) #13	PTPMT1 (ENSNLEG00000033815)	ENSNLEG00000033020	CELF1 (ENSNLEG00000014638) #14	RAPSN (ENSNLEG00000014627) #15	PSMC3 (ENSNLEG00000014572) #16	ENSNLEG00000014565 #17	SPI1 (ENSNLEG00000014555) #18	ENSNLEG00000014525 #19	MADD (ENSNLEG00000014491) #20	NR1H3 (ENSNLEG00000014458) #21	ACP2 (ENSNLEG00000014425) #22	DDB2 (ENSNLEG00000014385) #23	PACSIN3 (ENSNLEG00000014344) #24	ARFGAP2 (ENSNLEG00000014290) #25	CSTPP1 (ENSNLEG00000014283) #26	LRP4 (ENSNLEG00000014206) #27	CKAP5 (ENSNLEG00000014160) #28	F2 (ENSNLEG00000014150) #29	ZNF408 (ENSNLEG00000014132) #30	ARHGAP1 (ENSNLEG00000014095) #31	ATG13 (ENSNLEG00000014030) #32	HARBI1 (ENSNLEG00000014025)	ENSNLEG00000030310	AMBRA1 (ENSNLEG00000014020) #35	ENSNLEG00000014019	DGKZ (ENSNLEG00000014014)
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.b.a #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.l #37
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.b.a #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.l #37
Vervet Monkey	MODERN SPECIES		FNBP4 (ENSCSAG00000005833) #8	AGBL2 (ENSCSAG00000005812) #9	C1QTNF4 (ENSCSAG00000019208) #11	FAM180B (ENSCSAG00000005805)	NDUFS3 (ENSCSAG00000005802) #12	KBTBD4 (ENSCSAG00000005797) #13	PTPMT1 (ENSCSAG00000005789)	CELF1 (ENSCSAG00000005786) #14	RAPSN (ENSCSAG00000005780) #15	PSMC3 (ENSCSAG00000005779) #16	SLC39A13 (ENSCSAG00000005760) #17	SPI1 (ENSCSAG00000005757) #18	MYBPC3 (ENSCSAG00000005746) #19	MADD (ENSCSAG00000005705) #20	NR1H3 (ENSCSAG00000005699) #21	ACP2 (ENSCSAG00000005697) #22	DDB2 (ENSCSAG00000005694) #23	PACSIN3 (ENSCSAG00000005693) #24	ARFGAP2 (ENSCSAG00000005691) #25	CSTPP1 (ENSCSAG00000005689) #26	ENSCSAG00000019209	LRP4 (ENSCSAG00000005688) #27	CKAP5 (ENSCSAG00000005686) #28	F2 (ENSCSAG00000005684) #29	ZNF408 (ENSCSAG00000005681) #30	ARHGAP1 (ENSCSAG00000005680) #31	ATG13 (ENSCSAG00000005678) #32	HARBI1 (ENSCSAG00000005676)	AMBRA1 (ENSCSAG00000005675) #35	CHRM4 (ENSCSAG00000019210) #36	ENSCSAG00000005668 #37
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.b.a #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.l #37
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.b.a #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.l #37	ENSGT00940000156152
Pig-tailed macaque	MODERN SPECIES	485	FNBP4 (ENSMNEG00000039382) #8	AGBL2 (ENSMNEG00000028554) #9	MTCH2 (ENSMNEG00000020815) #10	FAM180B (ENSMNEG00000033276)	NDUFS3 (ENSMNEG00000030290) #12	KBTBD4 (ENSMNEG00000036394) #13	PTPMT1 (ENSMNEG00000034588)	CELF1 (ENSMNEG00000022558) #14	RAPSN (ENSMNEG00000029367) #15	ENSMNEG00000044564 #16	SLC39A13 (ENSMNEG00000040430) #17	SPI1 (ENSMNEG00000027877) #18	MYBPC3 (ENSMNEG00000029406) #19	MADD (ENSMNEG00000030300) #20	NR1H3 (ENSMNEG00000032200) #21	ACP2 (ENSMNEG00000031619) #22	DDB2 (ENSMNEG00000029423) #23	PACSIN3 (ENSMNEG00000041496) #24	ARFGAP2 (ENSMNEG00000042175) #25	CSTPP1 (ENSMNEG00000043208) #26	LRP4 (ENSMNEG00000039196) #27	CKAP5 (ENSMNEG00000045449) #28	F2 (ENSMNEG00000040864) #29	ZNF408 (ENSMNEG00000040215) #30	ARHGAP1 (ENSMNEG00000044079) #31	ATG13 (ENSMNEG00000028546) #32	HARBI1 (ENSMNEG00000039470)	AMBRA1 (ENSMNEG00000041218) #35	CHRM4 (ENSMNEG00000019466) #36	MDK (ENSMNEG00000006686) #37	DGKZ (ENSMNEG00000042881)
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.b.a #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.l #37	ENSGT00940000156152
Rhesus	DUPLICATION
Rhesus	MODERN SPECIES	5	MTCH2 (ENSMMUG00000043682) #10	C1QTNF4 (ENSMMUG00000004294) #11	FAM180B (ENSMMUG00000053860)	NDUFS3 (ENSMMUG00000045281) #12	PTPMT1 (ENSMMUG00000004286)	KBTBD4 (ENSMMUG00000004289) #13	CELF1 (ENSMMUG00000011657) #14	ENSMMUG00000064417	RAPSN (ENSMMUG00000009498) #15	PSMC3 (ENSMMUG00000015611) #16	SLC39A13 (ENSMMUG00000015607) #17	SPI1 (ENSMMUG00000015606) #18	MYBPC3 (ENSMMUG00000015604) #19	MADD (ENSMMUG00000015602) #20	NR1H3 (ENSMMUG00000015598) #21	ACP2 (ENSMMUG00000015597) #22	PACSIN3 (ENSMMUG00000006359) #24	ARFGAP2 (ENSMMUG00000006357) #25	CSTPP1 (ENSMMUG00000006355) #26	LRP4 (ENSMMUG00000013100) #27	CKAP5 (ENSMMUG00000003631) #28	F2 (ENSMMUG00000019674) #29	ZNF408 (ENSMMUG00000063711) #30	ARHGAP1 (ENSMMUG00000007831) #31	ATG13 (ENSMMUG00000019672) #32	HARBI1 (ENSMMUG00000059160)	AMBRA1 (ENSMMUG00000011526) #35	CHRM4 (ENSMMUG00000039412) #36	MDK (ENSMMUG00000038138) #37	DGKZ (ENSMMUG00000021446)	CREB3L1 (ENSMMUG00000018571)
Rhesus	MODERN SPECIES	54																ENSMMUG00000049949 #22
Crab-eating macaque	MODERN SPECIES	5	AGBL2 (ENSMFAG00000043435) #9	MTCH2 (ENSMFAG00000036915) #10	ENSMFAG00000049478	FAM180B (ENSMFAG00000043005)	NDUFS3 (ENSMFAG00000031067) #12	PTPMT1 (ENSMFAG00000042995)	KBTBD4 (ENSMFAG00000032928) #13	CELF1 (ENSMFAG00000003505) #14	RAPSN (ENSMFAG00000037957) #15	PSMC3 (ENSMFAG00000003854) #16	SLC39A13 (ENSMFAG00000003412) #17	ENSMFAG00000050805	MYBPC3 (ENSMFAG00000041621) #19	MADD (ENSMFAG00000039619) #20	NR1H3 (ENSMFAG00000002014) #21	ACP2 (ENSMFAG00000000393) #22	DDB2 (ENSMFAG00000031723) #23	ENSMFAG00000057633	PACSIN3 (ENSMFAG00000039377) #24	ARFGAP2 (ENSMFAG00000030043) #25	CSTPP1 (ENSMFAG00000038437) #26	LRP4 (ENSMFAG00000003482) #27	CKAP5 (ENSMFAG00000001378) #28	F2 (ENSMFAG00000031977) #29	ZNF408 (ENSMFAG00000036575) #30	ARHGAP1 (ENSMFAG00000036912) #31	ATG13 (ENSMFAG00000038288) #32	HARBI1 (ENSMFAG00000002487)	ENSMFAG00000002000 #35	CHRM4 (ENSMFAG00000021204) #36	MDK (ENSMFAG00000000818) #37
Cercopithecinae_b	ANCESTRAL SPECIES	27	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.b.a #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718.m #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.l #37
Olive baboon	MODERN SPECIES	3	MDK (ENSPANG00000020889) #37	AMBRA1 (ENSPANG00000017260) #35	CKAP5 (ENSPANG00000013230) #28	F2 (ENSPANG00000016657) #29	ZNF408 (ENSPANG00000032617) #30	ARHGAP1 (ENSPANG00000012059) #31	ATG13 (ENSPANG00000006613) #32	HARBI1 (ENSPANG00000023007)	ENSPANG00000023598 #27	ENSPANG00000030649	CSTPP1 (ENSPANG00000001891) #26	ARFGAP2 (ENSPANG00000016976) #25	PACSIN3 (ENSPANG00000007979) #24	ENSPANG00000018411 #20	NR1H3 (ENSPANG00000016658) #21	ACP2 (ENSPANG00000001892) #22	DDB2 (ENSPANG00000006542) #23	MYBPC3 (ENSPANG00000016552) #19	SPI1 (ENSPANG00000004468) #18	SLC39A13 (ENSPANG00000013478) #17	PSMC3 (ENSPANG00000017381) #16	RAPSN (ENSPANG00000004124) #15	CELF1 (ENSPANG00000021676) #14	ENSPANG00000007187	KBTBD4 (ENSPANG00000017205) #13	NDUFS3 (ENSPANG00000001634) #12	FAM180B (ENSPANG00000000112)	ENSPANG00000000111 #11	MTCH2 (ENSPANG00000001893) #10	AGBL2 (ENSPANG00000005171) #9	FNBP4 (ENSPANG00000006036) #8
Cercopithecinae_d	ANCESTRAL SPECIES	61	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.b.a #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718.m #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00910000147892	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36
Sooty mangabey	MODERN SPECIES	193	FNBP4 (ENSCATG00000038551) #8	AGBL2 (ENSCATG00000036090) #9	MTCH2 (ENSCATG00000004816) #10	FAM180B (ENSCATG00000042552)	NDUFS3 (ENSCATG00000029573) #12	KBTBD4 (ENSCATG00000032867) #13	PTPMT1 (ENSCATG00000033306)	CELF1 (ENSCATG00000040143) #14	RAPSN (ENSCATG00000043406) #15	ENSCATG00000020806 #16	SLC39A13 (ENSCATG00000042480) #17	SPI1 (ENSCATG00000041395) #18	MYBPC3 (ENSCATG00000033529) #19	MADD (ENSCATG00000019656) #20	NR1H3 (ENSCATG00000031838) #21	ACP2 (ENSCATG00000039992) #22	DDB2 (ENSCATG00000037043) #23	PACSIN3 (ENSCATG00000044836) #24	ARFGAP2 (ENSCATG00000032091) #25	CSTPP1 (ENSCATG00000034976) #26	LRP4 (ENSCATG00000034844) #27	CKAP5 (ENSCATG00000037509) #28	F2 (ENSCATG00000038182) #29	ZNF408 (ENSCATG00000035814) #30	ENSCATG00000034262	ARHGAP1 (ENSCATG00000043789) #31	ATG13 (ENSCATG00000038547) #32	HARBI1 (ENSCATG00000043376)	AMBRA1 (ENSCATG00000037285) #35	CHRM4 (ENSCATG00000003262) #36	MDK (ENSCATG00000042264) #37
Drill	MODERN SPECIES	1384	AGBL2 (ENSMLEG00000032331) #9	MTCH2 (ENSMLEG00000005996) #10	ENSMLEG00000010056 #11	FAM180B (ENSMLEG00000030769)	NDUFS3 (ENSMLEG00000042396) #12	KBTBD4 (ENSMLEG00000028879) #13	PTPMT1 (ENSMLEG00000020293)	CELF1 (ENSMLEG00000040834) #14	RAPSN (ENSMLEG00000037859) #15	ENSMLEG00000033056 #16	SLC39A13 (ENSMLEG00000043749) #17	SPI1 (ENSMLEG00000004290) #18	MYBPC3 (ENSMLEG00000028682) #19	MADD (ENSMLEG00000032767) #20	NR1H3 (ENSMLEG00000044270) #21	ACP2 (ENSMLEG00000042774) #22	DDB2 (ENSMLEG00000032535) #23	PACSIN3 (ENSMLEG00000043145) #24	ARFGAP2 (ENSMLEG00000043821) #25	ENSMLEG00000028689	CSTPP1 (ENSMLEG00000040490) #26	LRP4 (ENSMLEG00000043395) #27	CKAP5 (ENSMLEG00000034738) #28	F2 (ENSMLEG00000043758) #29	ZNF408 (ENSMLEG00000044029) #30	ENSMLEG00000042128	ARHGAP1 (ENSMLEG00000031958) #31	ATG13 (ENSMLEG00000027900) #32	HARBI1 (ENSMLEG00000026358)	ENSMLEG00000027431	AMBRA1 (ENSMLEG00000040418) #35
Rhinopithecus	ANCESTRAL SPECIES	64	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.b.a #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223.b #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.l #37	ENSGT00940000156152
Black snub-nosed monkey	MODERN SPECIES	2256													MYBPC3 (ENSRBIG00000040693) #19	MADD (ENSRBIG00000041171) #20	NR1H3 (ENSRBIG00000002426) #21	ACP2 (ENSRBIG00000003979) #22	DDB2 (ENSRBIG00000036127) #23	PACSIN3 (ENSRBIG00000027822) #24	ARFGAP2 (ENSRBIG00000041344) #25	CSTPP1 (ENSRBIG00000040070) #26	ENSRBIG00000043694	LRP4 (ENSRBIG00000024580) #27	CKAP5 (ENSRBIG00000044614) #28	F2 (ENSRBIG00000033898) #29	ZNF408 (ENSRBIG00000010662) #30	ARHGAP1 (ENSRBIG00000029818) #31	ENSRBIG00000044190	ATG13 (ENSRBIG00000044753) #32	HARBI1 (ENSRBIG00000010258)	ENSRBIG00000031731 #35	RUBCNL (ENSRBIG00000034790)
Golden snub-nosed monkey	MODERN SPECIES	1568	AGBL2 (ENSRROG00000038333) #9	MTCH2 (ENSRROG00000044709) #10	ENSRROG00000045763 #11	FAM180B (ENSRROG00000041406)	NDUFS3 (ENSRROG00000031411) #12	KBTBD4 (ENSRROG00000043819) #13	PTPMT1 (ENSRROG00000030092)	CELF1 (ENSRROG00000032588) #14	RAPSN (ENSRROG00000040174) #15	ENSRROG00000041915 #16	SLC39A13 (ENSRROG00000038485) #17	SPI1 (ENSRROG00000045565) #18	MYBPC3 (ENSRROG00000043489) #19	MADD (ENSRROG00000041291) #20	NR1H3 (ENSRROG00000045605) #21	ACP2 (ENSRROG00000028745) #22	DDB2 (ENSRROG00000045383) #23	PACSIN3 (ENSRROG00000041480) #24	ARFGAP2 (ENSRROG00000030954) #25	CSTPP1 (ENSRROG00000045631) #26	LRP4 (ENSRROG00000039736) #27	CKAP5 (ENSRROG00000039765) #28	F2 (ENSRROG00000038131) #29	ZNF408 (ENSRROG00000033904) #30	ARHGAP1 (ENSRROG00000037876) #31	ATG13 (ENSRROG00000031087) #32	HARBI1 (ENSRROG00000031237)	AMBRA1 (ENSRROG00000034630) #35	CHRM4 (ENSRROG00000024047) #36	ENSRROG00000040007 #37	DGKZ (ENSRROG00000044186)
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.a #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568.s #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.n.b #37	ENSGT00940000156152
Cebidae	ANCESTRAL SPECIES		ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.a #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568.s #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.n.b #37	ENSGT00940000156152
Marmoset	MODERN SPECIES	2	FNBP4 (ENSCJAG00000020254) #8	AGBL2 (ENSCJAG00000020239) #9	MTCH2 (ENSCJAG00000020213) #10	ENSCJAG00000039852 #11	FAM180B (ENSCJAG00000043701)	NDUFS3 (ENSCJAG00000020194) #12	KBTBD4 (ENSCJAG00000020173) #13	PTPMT1 (ENSCJAG00000020163)	CELF1 (ENSCJAG00000020133) #14	RAPSN (ENSCJAG00000020129) #15	ENSCJAG00000020108 #16	SPI1 (ENSCJAG00000020100) #18	MYBPC3 (ENSCJAG00000020066) #19	MADD (ENSCJAG00000020045) #20	NR1H3 (ENSCJAG00000020019) #21	ACP2 (ENSCJAG00000020008) #22	SLC39A13 (ENSCJAG00000020101) #17	DDB2 (ENSCJAG00000020000) #23	PACSIN3 (ENSCJAG00000019993) #24	ENSCJAG00000019965 #25	CSTPP1 (ENSCJAG00000019962) #26	LRP4 (ENSCJAG00000019944) #27	CKAP5 (ENSCJAG00000019878) #28	F2 (ENSCJAG00000019864) #29	ZNF408 (ENSCJAG00000019859) #30	ARHGAP1 (ENSCJAG00000019849) #31	ATG13 (ENSCJAG00000019823) #32	HARBI1 (ENSCJAG00000046232)	AMBRA1 (ENSCJAG00000002155) #35	CHRM4 (ENSCJAG00000011861) #36	ENSCJAG00000011852 #37
Cebidae_a	ANCESTRAL SPECIES	10	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.s.a #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568.s.a #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.n.b #37	ENSGT00940000156152
Bolivian squirrel monkey	MODERN SPECIES	42	AGBL2 (ENSSBOG00000023063) #9	MTCH2 (ENSSBOG00000027552) #10	C1QTNF4 (ENSSBOG00000033834) #11	FAM180B (ENSSBOG00000029352)	ENSSBOG00000001386 #12	KBTBD4 (ENSSBOG00000030700) #13	ENSSBOG00000025269	CELF1 (ENSSBOG00000021912) #14	RAPSN (ENSSBOG00000022262) #15	ENSSBOG00000006227 #16	SLC39A13 (ENSSBOG00000010603) #17	SPI1 (ENSSBOG00000022091) #18	MYBPC3 (ENSSBOG00000030340) #19	MADD (ENSSBOG00000021915) #20	NR1H3 (ENSSBOG00000027982) #21	ACP2 (ENSSBOG00000033600) #22	DDB2 (ENSSBOG00000030867) #23	PACSIN3 (ENSSBOG00000033696) #24	ENSSBOG00000031368 #25	CSTPP1 (ENSSBOG00000033686) #26	LRP4 (ENSSBOG00000032261) #27	ENSSBOG00000032726	ENSSBOG00000028063	CKAP5 (ENSSBOG00000031735) #28	F2 (ENSSBOG00000020779) #29	ZNF408 (ENSSBOG00000033023) #30	ARHGAP1 (ENSSBOG00000032970) #31	ATG13 (ENSSBOG00000009657) #32	HARBI1 (ENSSBOG00000025915)	AMBRA1 (ENSSBOG00000021917) #35	CHRM4 (ENSSBOG00000015294) #36
Capuchin	MODERN SPECIES	58		AGBL2 (ENSCCAG00000026390) #9	MTCH2 (ENSCCAG00000035226) #10	FAM180B (ENSCCAG00000028252)	NDUFS3 (ENSCCAG00000031365) #12	KBTBD4 (ENSCCAG00000020004) #13	PTPMT1 (ENSCCAG00000034346)	CELF1 (ENSCCAG00000033487) #14	RAPSN (ENSCCAG00000022014) #15	PSMC3 (ENSCCAG00000025080) #16	SLC39A13 (ENSCCAG00000034535) #17	SPI1 (ENSCCAG00000022473) #18	MYBPC3 (ENSCCAG00000036859) #19	MADD (ENSCCAG00000036617) #20	NR1H3 (ENSCCAG00000024854) #21	ACP2 (ENSCCAG00000022333) #22	DDB2 (ENSCCAG00000031012) #23	PACSIN3 (ENSCCAG00000031265) #24	ENSCCAG00000036464 #25	C11orf49 (ENSCCAG00000028967) #26	LRP4 (ENSCCAG00000034888) #27	ENSCCAG00000033202	CKAP5 (ENSCCAG00000029859) #28	PGAM4 (ENSCCAG00000037081)	F2 (ENSCCAG00000028699) #29	ZNF408 (ENSCCAG00000029472) #30	ARHGAP1 (ENSCCAG00000005865) #31	ATG13 (ENSCCAG00000033415) #32	HARBI1 (ENSCCAG00000033538)	AMBRA1 (ENSCCAG00000036631) #35	CHRM4 (ENSCCAG00000016622) #36
Mas night monkey	MODERN SPECIES	349	FNBP4 (ENSANAG00000027721) #8	AGBL2 (ENSANAG00000033268) #9	MTCH2 (ENSANAG00000022984) #10	FAM180B (ENSANAG00000021375)	NDUFS3 (ENSANAG00000030907) #12	KBTBD4 (ENSANAG00000029505) #13	ENSANAG00000033117	CELF1 (ENSANAG00000031770) #14	RAPSN (ENSANAG00000022248) #15	ENSANAG00000037076 #16	SLC39A13 (ENSANAG00000027448) #17	SPI1 (ENSANAG00000029485) #18	MYBPC3 (ENSANAG00000023289) #19	MADD (ENSANAG00000024603) #20	NR1H3 (ENSANAG00000037990) #21	ACP2 (ENSANAG00000032696) #22	DDB2 (ENSANAG00000036510) #23	PACSIN3 (ENSANAG00000030038) #24	ARFGAP2 (ENSANAG00000031850) #25	ENSANAG00000026796	CSTPP1 (ENSANAG00000037882) #26	LRP4 (ENSANAG00000038492) #27	ENSANAG00000038320	CKAP5 (ENSANAG00000031236) #28	F2 (ENSANAG00000036904) #29	ZNF408 (ENSANAG00000036294) #30	ARHGAP1 (ENSANAG00000038289) #31	ATG13 (ENSANAG00000036615) #32	HARBI1 (ENSANAG00000038532)	AMBRA1 (ENSANAG00000037577) #35	CHRM4 (ENSANAG00000007361) #36
Tarsier	MODERN SPECIES	4544														MADD (ENSTSYG00000001550) #20	NR1H3 (ENSTSYG00000001532) #21	ACP2 (ENSTSYG00000001510) #22	DDB2 (ENSTSYG00000001500) #23	PACSIN3 (ENSTSYG00000025849) #24	ARFGAP2 (ENSTSYG00000014155) #25	CUNH11orf49 (ENSTSYG00000014153) #26	ENSTSYG00000033400
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Lemuriformes	ANCESTRAL SPECIES	16	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Mouse lemur	MODERN SPECIES	27	ENSMICG00000005314	MTCH2 (ENSMICG00000027810) #10	FAM180B (ENSMICG00000001091)	NDUFS3 (ENSMICG00000045989) #12	KBTBD4 (ENSMICG00000001087) #13	PTPMT1 (ENSMICG00000028273)	CELF1 (ENSMICG00000045113) #14	ENSMICG00000043341	RAPSN (ENSMICG00000007148) #15	PSMC3 (ENSMICG00000007138) #16	SLC39A13 (ENSMICG00000007125) #17	SPI1 (ENSMICG00000007120) #18	MYBPC3 (ENSMICG00000007096) #19	MADD (ENSMICG00000007074) #20	NR1H3 (ENSMICG00000007066) #21	ACP2 (ENSMICG00000007053) #22	DDB2 (ENSMICG00000007047) #23	PACSIN3 (ENSMICG00000007038) #24	ENSMICG00000007019 #25	CSTPP1 (ENSMICG00000007010) #26	LRP4 (ENSMICG00000006982) #27	CKAP5 (ENSMICG00000006951) #28	F2 (ENSMICG00000006934) #29	ZNF408 (ENSMICG00000045320) #30	ARHGAP1 (ENSMICG00000006918) #31	ATG13 (ENSMICG00000006905) #32	HARBI1 (ENSMICG00000029266)	AMBRA1 (ENSMICG00000006891) #35	CHRM4 (ENSMICG00000042428) #36	MDK (ENSMICG00000006889) #37	DGKZ (ENSMICG00000006865)
Lemuriformes_a	ANCESTRAL SPECIES	75	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Greater bamboo lemur	MODERN SPECIES	1076	AGBL2 (ENSPSMG00000019802) #9	ENSPSMG00000019812	ENSPSMG00000019906 #10	FAM180B (ENSPSMG00000019935)	NDUFS3 (ENSPSMG00000019959) #12	KBTBD4 (ENSPSMG00000019995) #13	PTPMT1 (ENSPSMG00000020020)	CELF1 (ENSPSMG00000020100) #14	RAPSN (ENSPSMG00000020171) #15	PSMC3 (ENSPSMG00000020244) #16	SLC39A13 (ENSPSMG00000020336) #17	SPI1 (ENSPSMG00000020380) #18	MYBPC3 (ENSPSMG00000020533) #19	MADD (ENSPSMG00000021740) #20	NR1H3 (ENSPSMG00000022646) #21	ACP2 (ENSPSMG00000022714) #22	DDB2 (ENSPSMG00000022768) #23	PACSIN3 (ENSPSMG00000022785) #24	ARFGAP2 (ENSPSMG00000022927) #25	CSTPP1 (ENSPSMG00000022997) #26
Coquerels sifaka	MODERN SPECIES	328	FNBP4 (ENSPCOG00000016107) #8	AGBL2 (ENSPCOG00000020344) #9	MTCH2 (ENSPCOG00000018416) #10	FAM180B (ENSPCOG00000014736)	NDUFS3 (ENSPCOG00000012926) #12	KBTBD4 (ENSPCOG00000017241) #13	PTPMT1 (ENSPCOG00000026725)	CELF1 (ENSPCOG00000021865) #14	RAPSN (ENSPCOG00000019055) #15	PSMC3 (ENSPCOG00000020878) #16	SLC39A13 (ENSPCOG00000020868) #17	SPI1 (ENSPCOG00000026208) #18	MYBPC3 (ENSPCOG00000018047) #19	MADD (ENSPCOG00000013832) #20	NR1H3 (ENSPCOG00000023831) #21	ACP2 (ENSPCOG00000027729) #22	DDB2 (ENSPCOG00000022207) #23	PACSIN3 (ENSPCOG00000020469) #24	ARFGAP2 (ENSPCOG00000028490) #25	CSTPP1 (ENSPCOG00000013763) #26	LRP4 (ENSPCOG00000028608) #27	CKAP5 (ENSPCOG00000017517) #28	F2 (ENSPCOG00000018345) #29	ZNF408 (ENSPCOG00000028698) #30	ARHGAP1 (ENSPCOG00000020308) #31	ATG13 (ENSPCOG00000023763) #32	HARBI1 (ENSPCOG00000027989)	AMBRA1 (ENSPCOG00000028231) #35	CHRM4 (ENSPCOG00000013773) #36	MDK (ENSPCOG00000017622) #37	DGKZ (ENSPCOG00000026865)
Bushbaby	MODERN SPECIES	116	MTCH2 (ENSOGAG00000011607) #10	C1QTNF4 (ENSOGAG00000025902) #11	FAM180B (ENSOGAG00000032394)	NDUFS3 (ENSOGAG00000011606) #12	ENSOGAG00000030764	KBTBD4 (ENSOGAG00000028799) #13	PTPMT1 (ENSOGAG00000031935)	CELF1 (ENSOGAG00000011600) #14	RAPSN (ENSOGAG00000027783) #15	ENSOGAG00000015289 #16	SLC39A13 (ENSOGAG00000012440) #17	SPI1 (ENSOGAG00000012435) #18	MYBPC3 (ENSOGAG00000012425) #19	MADD (ENSOGAG00000012414) #20	NR1H3 (ENSOGAG00000012410) #21	ACP2 (ENSOGAG00000025562) #22	DDB2 (ENSOGAG00000012408) #23	PACSIN3 (ENSOGAG00000012403) #24	ARFGAP2 (ENSOGAG00000012399) #25	ENSOGAG00000026518	CSTPP1 (ENSOGAG00000012396) #26	LRP4 (ENSOGAG00000011979) #27	CKAP5 (ENSOGAG00000004560) #28	F2 (ENSOGAG00000004555) #29	ZNF408 (ENSOGAG00000034080) #30	ARHGAP1 (ENSOGAG00000014288) #31	ATG13 (ENSOGAG00000004547) #32	HARBI1 (ENSOGAG00000004554)	ENSOGAG00000033750	AMBRA1 (ENSOGAG00000002355) #35	CHRM4 (ENSOGAG00000033812) #36
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Eulipotyphla	ANCESTRAL SPECIES	133													ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23
Hedgehog	MODERN SPECIES	8779																ENSEEUG00000000750 #22
Common shrew	MODERN SPECIES	2331													ENSSARG00000002570 #19	ENSSARG00000002437 #20	NR1H3 (ENSSARG00000002403) #21	ACP2 (ENSSARG00000002360) #22	DDB2 (ENSSARG00000002337) #23
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Suina	ANCESTRAL SPECIES	34	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Pig	MODERN SPECIES	10	FNBP4 (ENSSSCG00000030610) #8	AGBL2 (ENSSSCG00000040838) #9	ENSSSCG00000013232 #10	C1QTNF4 (ENSSSCG00000013231) #11	FAM180B (ENSSSCG00000013230)	NDUFS3 (ENSSSCG00000032081) #12	KBTBD4 (ENSSSCG00000013227) #13	PTPMT1 (ENSSSCG00000013226)	CELF1 (ENSSSCG00000013233) #14	PSMC3 (ENSSSCG00000013239) #16	SLC39A13 (ENSSSCG00000013238) #17	SPI1 (ENSSSCG00000013237) #18	MYBPC3 (ENSSSCG00000013236) #19	MADD (ENSSSCG00000013235) #20	NR1H3 (ENSSSCG00000013241) #21	ACP2 (ENSSSCG00000013242) #22	DDB2 (ENSSSCG00000013243) #23	PACSIN3 (ENSSSCG00000013244) #24	ARFGAP2 (ENSSSCG00000013245) #25	CSTPP1 (ENSSSCG00000013246) #26	LRP4 (ENSSSCG00000013248) #27	CKAP5 (ENSSSCG00000013249) #28	ENSSSCG00000048195	F2 (ENSSSCG00000013252) #29	ZNF408 (ENSSSCG00000023097) #30	ARHGAP1 (ENSSSCG00000013256) #31	ATG13 (ENSSSCG00000013257) #32	HARBI1 (ENSSSCG00000013258)	AMBRA1 (ENSSSCG00000013262) #35	CHRM4 (ENSSSCG00000013261) #36	MDK (ENSSSCG00000013260) #37
Chacoan peccary	MODERN SPECIES	919	MTCH2 (ENSCWAG00000011837) #10	ENSCWAG00000011908 #11	FAM180B (ENSCWAG00000011934)	NDUFS3 (ENSCWAG00000011975) #12	KBTBD4 (ENSCWAG00000012134) #13	PTPMT1 (ENSCWAG00000012300)	CELF1 (ENSCWAG00000012400) #14	RAPSN (ENSCWAG00000012571) #15	PSMC3 (ENSCWAG00000012918) #16	SLC39A13 (ENSCWAG00000013013) #17	ENSCWAG00000013126	SPI1 (ENSCWAG00000013165) #18	MYBPC3 (ENSCWAG00000013297) #19	MADD (ENSCWAG00000014593) #20	NR1H3 (ENSCWAG00000020217) #21	ACP2 (ENSCWAG00000020271) #22	DDB2 (ENSCWAG00000020312) #23	PACSIN3 (ENSCWAG00000020363) #24	ARFGAP2 (ENSCWAG00000020384) #25	CSTPP1 (ENSCWAG00000020423) #26	ENSCWAG00000020438	LRP4 (ENSCWAG00000020453) #27	CKAP5 (ENSCWAG00000020545) #28	F2 (ENSCWAG00000020586) #29	ZNF408 (ENSCWAG00000020629) #30	ARHGAP1 (ENSCWAG00000020638) #31	ATG13 (ENSCWAG00000020671) #32	HARBI1 (ENSCWAG00000020778)	AMBRA1 (ENSCWAG00000020799) #35	CHRM4 (ENSCWAG00000020869) #36	MDK (ENSCWAG00000020882) #37
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Camelidae	ANCESTRAL SPECIES	25	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Alpaca	MODERN SPECIES	3542														ENSVPAG00000011844 #20	NR1H3 (ENSVPAG00000011840) #21	ENSVPAG00000011836 #22	DDB2 (ENSVPAG00000011835) #23	PACSIN3 (ENSVPAG00000011833) #24	ARFGAP2 (ENSVPAG00000011832) #25	ENSVPAG00000011831 #26	LRP4 (ENSVPAG00000011829) #27	CKAP5 (ENSVPAG00000011827) #28	ZNF408 (ENSVPAG00000011825) #30	ATG13 (ENSVPAG00000011823) #32	HARBI1 (ENSVPAG00000011821)	AMBRA1 (ENSVPAG00000011817) #35
Arabian camel	MODERN SPECIES	1	AGBL2 (ENSCDRG00005001568) #9	MTCH2 (ENSCDRG00005001631) #10	ENSCDRG00005001659 #11	FAM180B (ENSCDRG00005001672)	NDUFS3 (ENSCDRG00005001699) #12	KBTBD4 (ENSCDRG00005001788) #13	PTPMT1 (ENSCDRG00005001832)	CELF1 (ENSCDRG00005001849) #14	RAPSN (ENSCDRG00005001888) #15	PSMC3 (ENSCDRG00005001939) #16	SLC39A13 (ENSCDRG00005001964) #17	SPI1 (ENSCDRG00005001988) #18	MYBPC3 (ENSCDRG00005002015) #19	MADD (ENSCDRG00005002594) #20	NR1H3 (ENSCDRG00005006795) #21	ACP2 (ENSCDRG00005006623) #22	DDB2 (ENSCDRG00005007029) #23	PACSIN3 (ENSCDRG00005007398) #24	ARFGAP2 (ENSCDRG00005007474) #25	CSTPP1 (ENSCDRG00005008190) #26	ENSCDRG00005008443	LRP4 (ENSCDRG00005008476) #27	CKAP5 (ENSCDRG00005008832) #28	F2 (ENSCDRG00005009091) #29	ZNF408 (ENSCDRG00005009244) #30	ARHGAP1 (ENSCDRG00005009320) #31	ATG13 (ENSCDRG00005009422) #32	HARBI1 (ENSCDRG00005009768)	AMBRA1 (ENSCDRG00005009861) #35	CHRM4 (ENSCDRG00005010302) #36	MDK (ENSCDRG00005010345) #37
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Dolphin	MODERN SPECIES	2041		MTCH2 (ENSTTRG00000014169) #10	C1QTNF4 (ENSTTRG00000014168) #11	FAM180B (ENSTTRG00000014167)	NDUFS3 (ENSTTRG00000014164) #12	KBTBD4 (ENSTTRG00000014159) #13	ENSTTRG00000014158	CELF1 (ENSTTRG00000014157) #14	RAPSN (ENSTTRG00000014156) #15	PSMC3 (ENSTTRG00000014155) #16	SLC39A13 (ENSTTRG00000014154) #17	SPI1 (ENSTTRG00000014153) #18	MYBPC3 (ENSTTRG00000014152) #19	MADD (ENSTTRG00000014150) #20	NR1H3 (ENSTTRG00000014149) #21	ACP2 (ENSTTRG00000014147) #22	DDB2 (ENSTTRG00000014146) #23	PACSIN3 (ENSTTRG00000014143) #24	ARFGAP2 (ENSTTRG00000014137) #25	CSTPP1 (ENSTTRG00000014133) #26	LRP4 (ENSTTRG00000014129) #27	CKAP5 (ENSTTRG00000014121) #28
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Vaquita	MODERN SPECIES	19	AGBL2 (ENSPSNG00000012052) #9	MTCH2 (ENSPSNG00000011989) #10	ENSPSNG00000011949 #11	FAM180B (ENSPSNG00000011919)	NDUFS3 (ENSPSNG00000011780) #12	KBTBD4 (ENSPSNG00000011651) #13	PTPMT1 (ENSPSNG00000011591)	CELF1 (ENSPSNG00000011349) #14	RAPSN (ENSPSNG00000010989) #15	PSMC3 (ENSPSNG00000010889) #16	SLC39A13 (ENSPSNG00000010822) #17	SPI1 (ENSPSNG00000010691) #18	MYBPC3 (ENSPSNG00000009622) #19	MADD (ENSPSNG00000007281) #20	NR1H3 (ENSPSNG00000006534) #21	ACP2 (ENSPSNG00000006273) #22	DDB2 (ENSPSNG00000006057) #23	PACSIN3 (ENSPSNG00000006003) #24	ENSPSNG00000005975 #25	CSTPP1 (ENSPSNG00000005920) #26	LRP4 (ENSPSNG00000005781) #27	CKAP5 (ENSPSNG00000005667) #28	F2 (ENSPSNG00000005610) #29	ZNF408 (ENSPSNG00000005582) #30	ARHGAP1 (ENSPSNG00000005549) #31	ATG13 (ENSPSNG00000005490) #32	HARBI1 (ENSPSNG00000005453)	AMBRA1 (ENSPSNG00000005291) #35	CHRM4 (ENSPSNG00000005202) #36	MDK (ENSPSNG00000005164) #37	DGKZ (ENSPSNG00000004933)
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Beluga whale	MODERN SPECIES	7	ENSDLEG00000003961 #9	MTCH2 (ENSDLEG00000003979) #10	ENSDLEG00000004045 #11	FAM180B (ENSDLEG00000000116)	NDUFS3 (ENSDLEG00000000150) #12	KBTBD4 (ENSDLEG00000000205) #13	PTPMT1 (ENSDLEG00000000244)	CELF1 (ENSDLEG00000000264) #14	RAPSN (ENSDLEG00000000322) #15	PSMC3 (ENSDLEG00000000360) #16	SLC39A13 (ENSDLEG00000000405) #17	SPI1 (ENSDLEG00000000443) #18	MYBPC3 (ENSDLEG00000000811) #19	MADD (ENSDLEG00000003539) #20	NR1H3 (ENSDLEG00000013403) #21	ACP2 (ENSDLEG00000013563) #22	DDB2 (ENSDLEG00000014125) #23	PACSIN3 (ENSDLEG00000014213) #24	ARFGAP2 (ENSDLEG00000014461) #25	CSTPP1 (ENSDLEG00000016182) #26	LRP4 (ENSDLEG00000016355) #27	CKAP5 (ENSDLEG00000018239) #28	F2 (ENSDLEG00000018821) #29	ZNF408 (ENSDLEG00000018910) #30	ARHGAP1 (ENSDLEG00000018942) #31	ATG13 (ENSDLEG00000019150) #32	HARBI1 (ENSDLEG00000019555)	AMBRA1 (ENSDLEG00000019560) #35	CHRM4 (ENSDLEG00000019579) #36	MDK (ENSDLEG00000019582) #37	DGKZ (ENSDLEG00000019589)
Narwhal	MODERN SPECIES	314	AGBL2 (ENSMMNG00015021887) #9	MTCH2 (ENSMMNG00015021874) #10	ENSMMNG00015021868 #11	FAM180B (ENSMMNG00015021863)	NDUFS3 (ENSMMNG00015021859) #12	KBTBD4 (ENSMMNG00015021852) #13	PTPMT1 (ENSMMNG00015021844)	CELF1 (ENSMMNG00015021830) #14	RAPSN (ENSMMNG00015021818) #15	PSMC3 (ENSMMNG00015021802) #16	SLC39A13 (ENSMMNG00015021773) #17	SPI1 (ENSMMNG00015021760) #18	MYBPC3 (ENSMMNG00015021686) #19	MADD (ENSMMNG00015021102) #20	NR1H3 (ENSMMNG00015020682) #21	ACP2 (ENSMMNG00015020547) #22	DDB2 (ENSMMNG00015020426) #23	PACSIN3 (ENSMMNG00015020360) #24	ARFGAP2 (ENSMMNG00015020303) #25	CSTPP1 (ENSMMNG00015020243) #26	LRP4 (ENSMMNG00015020152) #27	CKAP5 (ENSMMNG00015019798) #28	F2 (ENSMMNG00015019642) #29	ZNF408 (ENSMMNG00015019610) #30	ARHGAP1 (ENSMMNG00015019583) #31	ATG13 (ENSMMNG00015019491) #32	HARBI1 (ENSMMNG00015019436)	AMBRA1 (ENSMMNG00015019294) #35	CHRM4 (ENSMMNG00015019208) #36	MDK (ENSMMNG00015019173) #37	DGKZ (ENSMMNG00015018868)
Sperm whale	MODERN SPECIES	199																ACP2 (ENSPCTG00005021825) #22	DDB2 (ENSPCTG00005021776) #23	PACSIN3 (ENSPCTG00005021733) #24	ARFGAP2 (ENSPCTG00005021635) #25	CUNH11orf49 (ENSPCTG00005021607) #26
Blue whale	MODERN SPECIES	19	AGBL2 (ENSBMSG00010022008) #9	MTCH2 (ENSBMSG00010022003) #10	ENSBMSG00010022000 #11	FAM180B (ENSBMSG00010021998)	NDUFS3 (ENSBMSG00010021996) #12	KBTBD4 (ENSBMSG00010021993) #13	PTPMT1 (ENSBMSG00010021990)	CELF1 (ENSBMSG00010021983) #14	RAPSN (ENSBMSG00010021975) #15	PSMC3 (ENSBMSG00010021968) #16	SLC39A13 (ENSBMSG00010021960) #17	SPI1 (ENSBMSG00010021953) #18	MYBPC3 (ENSBMSG00010021914) #19	MADD (ENSBMSG00010018497) #20	NR1H3 (ENSBMSG00010018229) #21	ACP2 (ENSBMSG00010018103) #22	DDB2 (ENSBMSG00010017897) #23	PACSIN3 (ENSBMSG00010017852) #24	ARFGAP2 (ENSBMSG00010017710) #25	CSTPP1 (ENSBMSG00010017644) #26	LRP4 (ENSBMSG00010017494) #27	CKAP5 (ENSBMSG00010017392) #28	F2 (ENSBMSG00010017325) #29	ZNF408 (ENSBMSG00010017299) #30	ENSBMSG00010017280	ARHGAP1 (ENSBMSG00010017220) #31	ATG13 (ENSBMSG00010017110) #32	HARBI1 (ENSBMSG00010017065)	AMBRA1 (ENSBMSG00010015727) #35	CHRM4 (ENSBMSG00010015622) #36	MDK (ENSBMSG00010015583) #37
Pecora	ANCESTRAL SPECIES	7	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Percora_a	ANCESTRAL SPECIES	6	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Bovidae	ANCESTRAL SPECIES	6	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Caprinae	ANCESTRAL SPECIES	6	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Rambouillet Sheep	MODERN SPECIES	6	AGBL2 (ENSOARG00020014911) #9	MTCH2 (ENSOARG00020014843) #10	ENSOARG00020014813 #11	FAM180B (ENSOARG00020014767)	NDUFS3 (ENSOARG00020014698) #12	ENSOARG00020014554 #13	ENSOARG00020014495	CELF1 (ENSOARG00020014203) #14	RAPSN (ENSOARG00020013803) #15	PSMC3 (ENSOARG00020013548) #16	SLC39A13 (ENSOARG00020013213) #17	SPI1 (ENSOARG00020013137) #18	MYBPC3 (ENSOARG00020012776) #19	MADD (ENSOARG00020011512) #20	NR1H3 (ENSOARG00020011361) #21	ACP2 (ENSOARG00020010726) #22	DDB2 (ENSOARG00020010497) #23	PACSIN3 (ENSOARG00020010393) #24	ARFGAP2 (ENSOARG00020010021) #25	CSTPP1 (ENSOARG00020023714) #26	LRP4 (ENSOARG00020023551) #27	CKAP5 (ENSOARG00020023388) #28	F2 (ENSOARG00020023298) #29	ZNF408 (ENSOARG00020023273) #30	ARHGAP1 (ENSOARG00020023238) #31	ATG13 (ENSOARG00020023093) #32	HARBI1 (ENSOARG00020023065)	AMBRA1 (ENSOARG00020022829) #35	CHRM4 (ENSOARG00020022796) #36	MDK (ENSOARG00020022725) #37	DGKZ (ENSOARG00020021820)
Goat	MODERN SPECIES	6	AGBL2 (ENSCHIG00000022131) #9	MTCH2 (ENSCHIG00000012614) #10	C1QTNF4 (ENSCHIG00000003743) #11	FAM180B (ENSCHIG00000011395)	NDUFS3 (ENSCHIG00000017760) #12	KBTBD4 (ENSCHIG00000016297) #13	PTPMT1 (ENSCHIG00000015788)	CELF1 (ENSCHIG00000024582) #14	RAPSN (ENSCHIG00000015950) #15	PSMC3 (ENSCHIG00000010249) #16	SLC39A13 (ENSCHIG00000018746) #17	SPI1 (ENSCHIG00000019747) #18	MYBPC3 (ENSCHIG00000021976) #19	MADD (ENSCHIG00000003140) #20	NR1H3 (ENSCHIG00000013751) #21	ACP2 (ENSCHIG00000017023) #22	DDB2 (ENSCHIG00000021645) #23	PACSIN3 (ENSCHIG00000007034) #24	ARFGAP2 (ENSCHIG00000003758) #25	CSTPP1 (ENSCHIG00000013768) #26	LRP4 (ENSCHIG00000024661) #27	CKAP5 (ENSCHIG00000018334) #28	ENSCHIG00000009743	F2 (ENSCHIG00000024270) #29	ZNF408 (ENSCHIG00000025346) #30	ARHGAP1 (ENSCHIG00000022137) #31	ATG13 (ENSCHIG00000014614) #32	HARBI1 (ENSCHIG00000014327)	AMBRA1 (ENSCHIG00000016854) #35	CHRM4 (ENSCHIG00000006372) #36	MDK (ENSCHIG00000020969) #37
Bovinae	ANCESTRAL SPECIES	26	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.d.a #37	ENSGT00940000156152
Bos	ANCESTRAL SPECIES	25	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.d.a #37	ENSGT00940000156152
Bos_b	ANCESTRAL SPECIES	12	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.d.a #37	ENSGT00940000156152
Hybrid Bos Indicus	MODERN SPECIES	6	FNBP4 (ENSBIXG00005020572) #8	AGBL2 (ENSBIXG00005020494) #9	MTCH2 (ENSBIXG00005003456) #10	ENSBIXG00005020389 #11	FAM180B (ENSBIXG00005020374)	KBTBD4 (ENSBIXG00005020354) #13	PTPMT1 (ENSBIXG00005007208)	CELF1 (ENSBIXG00005020290) #14	RAPSN (ENSBIXG00005003352) #15	PSMC3 (ENSBIXG00005020171) #16	SLC39A13 (ENSBIXG00005003304) #17	SPI1 (ENSBIXG00005020034) #18	MYBPC3 (ENSBIXG00005002636) #19	MADD (ENSBIXG00005003241) #20	NR1H3 (ENSBIXG00005019630) #21	ACP2 (ENSBIXG00005019552) #22	DDB2 (ENSBIXG00005019438) #23	PACSIN3 (ENSBIXG00005019375) #24	ARFGAP2 (ENSBIXG00005019318) #25	CSTPP1 (ENSBIXG00005019202) #26	LRP4 (ENSBIXG00005019152) #27	CKAP5 (ENSBIXG00005018988) #28	F2 (ENSBIXG00005018882) #29	ZNF408 (ENSBIXG00005018816) #30	ARHGAP1 (ENSBIXG00005003058) #31	ATG13 (ENSBIXG00005003045) #32	HARBI1 (ENSBIXG00005018637)	AMBRA1 (ENSBIXG00005007656) #35	CHRM4 (ENSBIXG00005018467) #36	ENSBIXG00005018454 #37	DGKZ (ENSBIXG00005018295)
Cow	MODERN SPECIES	6	FNBP4 (ENSBTAG00000020911) #8	AGBL2 (ENSBTAG00000051215) #9	MTCH2 (ENSBTAG00000018742) #10	FAM180B (ENSBTAG00000055123)	NDUFS3 (ENSBTAG00000018483) #12	KBTBD4 (ENSBTAG00000018482) #13	PTPMT1 (ENSBTAG00000018479)	CELF1 (ENSBTAG00000002520) #14	RAPSN (ENSBTAG00000021745) #15	PSMC3 (ENSBTAG00000021744) #16	SLC39A13 (ENSBTAG00000019436) #17	SPI1 (ENSBTAG00000021709) #18	MYBPC3 (ENSBTAG00000021707) #19	MADD (ENSBTAG00000021700) #20	NR1H3 (ENSBTAG00000010681) #21	ACP2 (ENSBTAG00000021002) #22	DDB2 (ENSBTAG00000020999) #23	PACSIN3 (ENSBTAG00000009576) #24	ARFGAP2 (ENSBTAG00000009574) #25	CSTPP1 (ENSBTAG00000009573) #26	LRP4 (ENSBTAG00000008429) #27	CKAP5 (ENSBTAG00000004448) #28	F2 (ENSBTAG00000007148) #29	ZNF408 (ENSBTAG00000027557) #30	ARHGAP1 (ENSBTAG00000016501) #31	ATG13 (ENSBTAG00000017325) #32	HARBI1 (ENSBTAG00000004639)	AMBRA1 (ENSBTAG00000004282) #35	CHRM4 (ENSBTAG00000033699) #36	MDK (ENSBTAG00000007740) #37	DGKZ (ENSBTAG00000013636)
Bos_a	ANCESTRAL SPECIES	36	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00940000155097.e.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.d.a #37
Domestic yak	MODERN SPECIES	4	AGBL2 (ENSBGRG00000019908) #9	MTCH2 (ENSBGRG00000019732) #10	ENSBGRG00000019699 #11	FAM180B (ENSBGRG00000019645)	NDUFS3 (ENSBGRG00000019602) #12	KBTBD4 (ENSBGRG00000019526) #13	ENSBGRG00000019424	CELF1 (ENSBGRG00000019052) #14	RAPSN (ENSBGRG00000018674) #15	PSMC3 (ENSBGRG00000018446) #16	SLC39A13 (ENSBGRG00000018326) #17	SPI1 (ENSBGRG00000018200) #18	MYBPC3 (ENSBGRG00000017872) #19	MADD (ENSBGRG00000017261) #20	NR1H3 (ENSBGRG00000016958) #21	ACP2 (ENSBGRG00000016478) #22	DDB2 (ENSBGRG00000016037) #23	PACSIN3 (ENSBGRG00000015878) #24	ARFGAP2 (ENSBGRG00000015155) #25	CSTPP1 (ENSBGRG00000014751) #26	LRP4 (ENSBGRG00000014275) #27	CKAP5 (ENSBGRG00000013953) #28	F2 (ENSBGRG00000013793) #29	ZNF408 (ENSBGRG00000013630) #30	ARHGAP1 (ENSBGRG00000013511) #31	ATG13 (ENSBGRG00000013263) #32	HARBI1 (ENSBGRG00000013222)	TAF9 (ENSBGRG00000013181)	AMBRA1 (ENSBGRG00000012979) #35	CHRM4 (ENSBGRG00000012936) #36	ENSBGRG00000012888 #37
Wild yak	MODERN SPECIES	1047				ENSBMUG00000024672	NDUFS3 (ENSBMUG00000024660) #12	KBTBD4 (ENSBMUG00000024643) #13	ENSBMUG00000024626	CELF1 (ENSBMUG00000024594) #14	RAPSN (ENSBMUG00000024536) #15	PSMC3 (ENSBMUG00000024510) #16	SLC39A13 (ENSBMUG00000024475) #17	SPI1 (ENSBMUG00000024426) #18	MADD (ENSBMUG00000024292) #20	MYBPC3 (ENSBMUG00000023919) #19	NR1H3 (ENSBMUG00000023834) #21	ACP2 (ENSBMUG00000023770) #22	DDB2 (ENSBMUG00000023687) #23	PACSIN3 (ENSBMUG00000023616) #24	ARFGAP2 (ENSBMUG00000023585) #25	CSTPP1 (ENSBMUG00000023500) #26	LRP4 (ENSBMUG00000023473) #27	CKAP5 (ENSBMUG00000023430) #28	F2 (ENSBMUG00000023372) #29	ZNF408 (ENSBMUG00000023350) #30	ARHGAP1 (ENSBMUG00000023337) #31	ATG13 (ENSBMUG00000023285) #32	HARBI1 (ENSBMUG00000023163)	ENSBMUG00000023155	AMBRA1 (ENSBMUG00000023114) #35	CHRM4 (ENSBMUG00000022974) #36	ENSBMUG00000022959 #37
American bison	MODERN SPECIES	3100	FNBP4 (ENSBBBG00000012233) #8	AGBL2 (ENSBBBG00000012259) #9	MTCH2 (ENSBBBG00000002309) #10	FAM180B (ENSBBBG00000002312)	NDUFS3 (ENSBBBG00000012284) #12	KBTBD4 (ENSBBBG00000012295) #13	PTPMT1 (ENSBBBG00000001931)	CELF1 (ENSBBBG00000012337) #14	RAPSN (ENSBBBG00000002335) #15	PSMC3 (ENSBBBG00000002347) #16	SLC39A13 (ENSBBBG00000002358) #17	ENSBBBG00000012398	MYBPC3 (ENSBBBG00000012763) #19	MADD (ENSBBBG00000013202) #20	NR1H3 (ENSBBBG00000013293) #21	ACP2 (ENSBBBG00000001605) #22	DDB2 (ENSBBBG00000007213) #23	PACSIN3 (ENSBBBG00000013420) #24	ARFGAP2 (ENSBBBG00000013487) #25	CSTPP1 (ENSBBBG00000013522) #26	LRP4 (ENSBBBG00000007215) #27	CKAP5 (ENSBBBG00000002889) #28	F2 (ENSBBBG00000002915) #29	ZNF408 (ENSBBBG00000013728) #30	ARHGAP1 (ENSBBBG00000013736) #31	ATG13 (ENSBBBG00000002985) #32	HARBI1 (ENSBBBG00000013882)	AMBRA1 (ENSBBBG00000014063) #35	CHRM4 (ENSBBBG00000014075) #36	ENSBBBG00000014102 #37	ENSBBBG00000003163
Siberian musk deer	MODERN SPECIES	118	MTCH2 (ENSMMSG00000002552) #10	ENSMMSG00000002578 #11	FAM180B (ENSMMSG00000002588)	NDUFS3 (ENSMMSG00000002602) #12	KBTBD4 (ENSMMSG00000002638) #13	PTPMT1 (ENSMMSG00000002650)	CELF1 (ENSMMSG00000005936) #14	ENSMMSG00000006034	RAPSN (ENSMMSG00000006063) #15	PSMC3 (ENSMMSG00000006116) #16	SLC39A13 (ENSMMSG00000006163) #17	SPI1 (ENSMMSG00000006220) #18	MYBPC3 (ENSMMSG00000006254) #19	MADD (ENSMMSG00000006433) #20	NR1H3 (ENSMMSG00000006800) #21	ACP2 (ENSMMSG00000006877) #22	DDB2 (ENSMMSG00000007023) #23	ENSMMSG00000007128	PACSIN3 (ENSMMSG00000007142) #24	ARFGAP2 (ENSMMSG00000007196) #25	CSTPP1 (ENSMMSG00000007479) #26	LRP4 (ENSMMSG00000007545) #27	CKAP5 (ENSMMSG00000007823) #28	F2 (ENSMMSG00000008000) #29	ZNF408 (ENSMMSG00000008033) #30	ARHGAP1 (ENSMMSG00000008062) #31	ATG13 (ENSMMSG00000008155) #32	HARBI1 (ENSMMSG00000008321)	AMBRA1 (ENSMMSG00000008353) #35	CHRM4 (ENSMMSG00000008482) #36	MDK (ENSMMSG00000008497) #37
Yarkand deer	MODERN SPECIES		AGBL2 (ENSCHYG00000003509) #9	MTCH2 (ENSCHYG00000003437) #10	ENSCHYG00000003424 #11	FAM180B (ENSCHYG00000003417)	NDUFS3 (ENSCHYG00000003399) #12	KBTBD4 (ENSCHYG00000003377) #13	PTPMT1 (ENSCHYG00000003361)	ENSCHYG00000003356	CELF1 (ENSCHYG00000003333) #14	RAPSN (ENSCHYG00000003218) #15	PSMC3 (ENSCHYG00000003185) #16	SLC39A13 (ENSCHYG00000003145) #17	SPI1 (ENSCHYG00000003123) #18	MADD (ENSCHYG00000002609) #20	NR1H3 (ENSCHYG00000002538) #21	ACP2 (ENSCHYG00000002437) #22	DDB2 (ENSCHYG00000002377) #23	PACSIN3 (ENSCHYG00000002328) #24	ARFGAP2 (ENSCHYG00000002254) #25	CSTPP1 (ENSCHYG00000002208) #26	LRP4 (ENSCHYG00000002074) #27	CKAP5 (ENSCHYG00000001967) #28	F2 (ENSCHYG00000001885) #29	ZNF408 (ENSCHYG00000001850) #30	ARHGAP1 (ENSCHYG00000001791) #31	ATG13 (ENSCHYG00000001705) #32	HARBI1 (ENSCHYG00000001684)	AMBRA1 (ENSCHYG00000001540) #35	CHRM4 (ENSCHYG00000001502) #36	MDK (ENSCHYG00000001474) #37	DGKZ (ENSCHYG00000001154)
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Carnivora	ANCESTRAL SPECIES	7	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Caniformia	ANCESTRAL SPECIES	25	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Ursidae	ANCESTRAL SPECIES	2	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Ursus	ANCESTRAL SPECIES	85	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00910000148141	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
American black bear	MODERN SPECIES	4876															NR1H3 (ENSUAMG00000002590) #21	ACP2 (ENSUAMG00000002864) #22	DDB2 (ENSUAMG00000003455) #23	PACSIN3 (ENSUAMG00000003457) #24	ARFGAP2 (ENSUAMG00000003461) #25	CSTPP1 (ENSUAMG00000003474) #26
Polar bear	MODERN SPECIES	229	FNBP4 (ENSUMAG00000009092) #8	AGBL2 (ENSUMAG00000009098) #9	MTCH2 (ENSUMAG00000009168) #10	FAM180B (ENSUMAG00000009202)	NDUFS3 (ENSUMAG00000009205) #12	KBTBD4 (ENSUMAG00000009210) #13	PTPMT1 (ENSUMAG00000009215)	CELF1 (ENSUMAG00000009218) #14	RAPSN (ENSUMAG00000009220) #15	PSMC3 (ENSUMAG00000009232) #16	SLC39A13 (ENSUMAG00000009241) #17	SPI1 (ENSUMAG00000009255) #18	MYBPC3 (ENSUMAG00000009303) #19	MADD (ENSUMAG00000009893) #20	NR1H3 (ENSUMAG00000014293) #21	ACP2 (ENSUMAG00000014297) #22	DDB2 (ENSUMAG00000014299) #23	PACSIN3 (ENSUMAG00000014303) #24	ARFGAP2 (ENSUMAG00000014307) #25	CSTPP1 (ENSUMAG00000014321) #26	LRP4 (ENSUMAG00000014330) #27	CKAP5 (ENSUMAG00000014345) #28	F2 (ENSUMAG00000014382) #29	ZNF408 (ENSUMAG00000014405) #30	ARHGAP1 (ENSUMAG00000014408) #31	ATG13 (ENSUMAG00000014415) #32	HARBI1 (ENSUMAG00000014427)	AMBRA1 (ENSUMAG00000014438) #35	MDK (ENSUMAG00000014474) #37	DGKZ (ENSUMAG00000014597)	CREB3L1 (ENSUMAG00000015322)
Giant Panda	MODERN SPECIES	7	AGBL2 (ENSAMEG00000007763) #9	MTCH2 (ENSAMEG00000007696) #10	ENSAMEG00000007688 #11	FAM180B (ENSAMEG00000007683)	NDUFS3 (ENSAMEG00000007649) #12	KBTBD4 (ENSAMEG00000007634) #13	PTPMT1 (ENSAMEG00000007624)	CELF1 (ENSAMEG00000007596) #14	RAPSN (ENSAMEG00000007575) #15	PSMC3 (ENSAMEG00000007538) #16	SLC39A13 (ENSAMEG00000007505) #17	SPI1 (ENSAMEG00000030284) #18	MYBPC3 (ENSAMEG00000007362) #19	MADD (ENSAMEG00000007321) #20	NR1H3 (ENSAMEG00000007298) #21	ACP2 (ENSAMEG00000007273) #22	DDB2 (ENSAMEG00000007255) #23	PACSIN3 (ENSAMEG00000007225) #24	ARFGAP2 (ENSAMEG00000007175) #25	CSTPP1 (ENSAMEG00000007146) #26	LRP4 (ENSAMEG00000007069) #27	CKAP5 (ENSAMEG00000006979) #28	F2 (ENSAMEG00000006910) #29	ZNF408 (ENSAMEG00000006904) #30	ARHGAP1 (ENSAMEG00000006844) #31	ATG13 (ENSAMEG00000006798) #32	HARBI1 (ENSAMEG00000006795)	ENSAMEG00000023608	AMBRA1 (ENSAMEG00000006762) #35	CHRM4 (ENSAMEG00000020060) #36	MDK (ENSAMEG00000006752) #37
Mustelinae	ANCESTRAL SPECIES	74	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
American mink	MODERN SPECIES	45	AGBL2 (ENSNVIG00000009947) #9	MTCH2 (ENSNVIG00000010063) #10	C1QTNF4 (ENSNVIG00000010108) #11	FAM180B (ENSNVIG00000010117)	NDUFS3 (ENSNVIG00000010127) #12	KBTB4 (ENSNVIG00000010139) #13	PTPMT1 (ENSNVIG00000010173)	CELF1 (ENSNVIG00000010227) #14	RAPSN (ENSNVIG00000010353) #15	PSMC3 (ENSNVIG00000010384) #16	SLC39A13 (ENSNVIG00000010448) #17	SPI1 (ENSNVIG00000010511) #18	MYBPC3 (ENSNVIG00000010535) #19	MADD (ENSNVIG00000010799) #20	NR1H3 (ENSNVIG00000011492) #21	ACP2 (ENSNVIG00000011563) #22	DDB2 (ENSNVIG00000011648) #23	PACSIN3 (ENSNVIG00000011680) #24	ARFGAP2 (ENSNVIG00000011708) #25	CK049 (ENSNVIG00000011836) #26	LRP4 (ENSNVIG00000011939) #27	CKAP5 (ENSNVIG00000012011) #28	F2 (ENSNVIG00000012216) #29	ZNF408 (ENSNVIG00000012294) #30	ATG13 (ENSNVIG00000012327) #32	HARB1 (ENSNVIG00000012442)	AMBRA1 (ENSNVIG00000012478) #35	CHRM4 (ENSNVIG00000012697) #36	ENSNVIG00000012699 #37	DGKZ (ENSNVIG00000012726)	CREB3L1 (ENSNVIG00000012921)
Ferret	MODERN SPECIES	255	AGBL2 (ENSMPUG00000003840) #9	MTCH2 (ENSMPUG00000003852) #10	C1QTNF4 (ENSMPUG00000003861) #11	FAM180B (ENSMPUG00000003869)	NDUFS3 (ENSMPUG00000003880) #12	KBTBD4 (ENSMPUG00000003932) #13	PTPMT1 (ENSMPUG00000003938)	CELF1 (ENSMPUG00000003960) #14	RAPSN (ENSMPUG00000003974) #15	SLC39A13 (ENSMPUG00000003979) #17	PSMC3 (ENSMPUG00000003992) #16	SPI1 (ENSMPUG00000004125) #18	MYBPC3 (ENSMPUG00000004128) #19	MADD (ENSMPUG00000004775) #20	NR1H3 (ENSMPUG00000004787) #21	ACP2 (ENSMPUG00000004871) #22	DDB2 (ENSMPUG00000004880) #23	PACSIN3 (ENSMPUG00000004892) #24	ARFGAP2 (ENSMPUG00000005012) #25	CSTPP1 (ENSMPUG00000005029) #26	LRP4 (ENSMPUG00000005034) #27	CKAP5 (ENSMPUG00000005279) #28	F2 (ENSMPUG00000005310) #29	ZNF408 (ENSMPUG00000005490) #30	ARHGAP1 (ENSMPUG00000005499) #31	ATG13 (ENSMPUG00000005512) #32	HARBI1 (ENSMPUG00000005540)	AMBRA1 (ENSMPUG00000005552) #35	CHRM4 (ENSMPUG00000018440) #36	MDK (ENSMPUG00000005575) #37	DGKZ (ENSMPUG00000005616)
Canidae	ANCESTRAL SPECIES	13	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480.h #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.e.a #37	ENSGT00940000156152
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480.h #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.u #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b.e.a #37	ENSGT00940000156152
Dingo	MODERN SPECIES	69	AGBL2 (ENSCAFG00020025573) #9	MTCH2 (ENSCAFG00020025567) #10	C1QTNF4 (ENSCAFG00020025565) #11	FAM180B (ENSCAFG00020025564)	ENSCAFG00020025563 #12	KBTBD4 (ENSCAFG00020025561) #13	PTPMT1 (ENSCAFG00020025558)	CELF1 (ENSCAFG00020025487) #14	RAPSN (ENSCAFG00020025481) #15	ENSCAFG00020025479 #16	SLC39A13 (ENSCAFG00020025475) #17	SPI1 (ENSCAFG00020025473) #18	MYBPC3 (ENSCAFG00020025458) #19	MADD (ENSCAFG00020022385) #20	NR1H3 (ENSCAFG00020022209) #21	ACP2 (ENSCAFG00020022205) #22	DDB2 (ENSCAFG00020022201) #23	PACSIN3 (ENSCAFG00020022195) #24	ARFGAP2 (ENSCAFG00020022191) #25	CSTPP1 (ENSCAFG00020022185) #26	LRP4 (ENSCAFG00020022152) #27	CKAP5 (ENSCAFG00020019305) #28	F2 (ENSCAFG00020019158) #29	ZNF408 (ENSCAFG00020019155) #30	ARHGAP1 (ENSCAFG00020019150) #31	ATG13 (ENSCAFG00020019142) #32	HARBI1 (ENSCAFG00020019139)	AMBRA1 (ENSCAFG00020019116) #35	CHRM4 (ENSCAFG00020019111) #36	ENSCAFG00020019107 #37	DGKZ (ENSCAFG00020019055)
Dog	MODERN SPECIES	9	AGBL2 (ENSCAFG00845019987) #9	ENSCAFG00845020290 #10	ENSCAFG00845020371 #11	FAM180B (ENSCAFG00845020398)	ENSCAFG00845020432 #12	KBTBD4 (ENSCAFG00845020495) #13	PTPMT1 (ENSCAFG00845020551)	CELF1 (ENSCAFG00845020631) #14	RAPSN (ENSCAFG00845020952) #15	ENSCAFG00845021252 #16	SLC39A13 (ENSCAFG00845021469) #17	SPI1 (ENSCAFG00845021614) #18	MYBPC3 (ENSCAFG00845021902) #19	MADD (ENSCAFG00845023101) #20	NR1H3 (ENSCAFG00845024090) #21	ACP2 (ENSCAFG00845024517) #22	DDB2 (ENSCAFG00845024798) #23	PACSIN3 (ENSCAFG00845025012) #24	ARFGAP2 (ENSCAFG00845025262) #25	CSTPP1 (ENSCAFG00845025843) #26	LRP4 (ENSCAFG00845026118) #27	CKAP5 (ENSCAFG00845026513) #28	F2 (ENSCAFG00845026955) #29	ZNF408 (ENSCAFG00845027019) #30	ARHGAP1 (ENSCAFG00845027069) #31	ATG13 (ENSCAFG00845027292) #32	HARBI1 (ENSCAFG00845027517)	AMBRA1 (ENSCAFG00845027652) #35	ENSCAFG00845028115	CHRM4 (ENSCAFG00845028143) #36	ENSCAFG00845028187 #37
Red fox	MODERN SPECIES	49	FNBP4 (ENSVVUG00000023114) #8	AGBL2 (ENSVVUG00000023154) #9	MTCH2 (ENSVVUG00000023181) #10	KBTBD4 (ENSVVUG00000023426) #13	ENSVVUG00000023430	NDUFS3 (ENSVVUG00000023433) #12	PTPMT1 (ENSVVUG00000023435)	CELF1 (ENSVVUG00000023439) #14	RAPSN (ENSVVUG00000023449) #15	PSMC3 (ENSVVUG00000023452) #16	SLC39A13 (ENSVVUG00000023457) #17	SPI1 (ENSVVUG00000023463) #18	MYBPC3 (ENSVVUG00000023562) #19	MADD (ENSVVUG00000025425) #20	NR1H3 (ENSVVUG00000026170) #21	ACP2 (ENSVVUG00000026189) #22	DDB2 (ENSVVUG00000026319) #23	PACSIN3 (ENSVVUG00000026352) #24	ARFGAP2 (ENSVVUG00000026397) #25	CSTPP1 (ENSVVUG00000026503) #26	LRP4 (ENSVVUG00000026554) #27	CKAP5 (ENSVVUG00000026762) #28	F2 (ENSVVUG00000026767) #29	ZNF408 (ENSVVUG00000026805) #30	ARHGAP1 (ENSVVUG00000026807) #31	ATG13 (ENSVVUG00000026821) #32	HARBI1 (ENSVVUG00000026967)	AMBRA1 (ENSVVUG00000026969) #35	CHRM4 (ENSVVUG00000026978) #36	MDK (ENSVVUG00000026979) #37	DGKZ (ENSVVUG00000026981)
Felidae	ANCESTRAL SPECIES		ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00500000045038.m.a.a	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Panthera	ANCESTRAL SPECIES	13	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00500000045038.m.a.a	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
Panthera_a	ANCESTRAL SPECIES	20	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00500000045038.m.a.a	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37
leopard	MODERN SPECIES	58	AGBL2 (ENSPPRG00000024671) #9	MTCH2 (ENSPPRG00000024284) #10	ENSPPRG00000024156 #11	FAM180B (ENSPPRG00000024070)	NDUFS3 (ENSPPRG00000023580) #12	KBTBD4 (ENSPPRG00000022635) #13	PTPMT1 (ENSPPRG00000000430)	CELF1 (ENSPPRG00000002376) #14	RAPSN (ENSPPRG00000004770) #15	PSMC3 (ENSPPRG00000006737) #16	SLC39A13 (ENSPPRG00000009592) #17	SPI1 (ENSPPRG00000010085) #18	MYBPC3 (ENSPPRG00000024064) #19	MADD (ENSPPRG00000000412) #20	NR1H3 (ENSPPRG00000002008) #21	ACP2 (ENSPPRG00000004019) #22	DDB2 (ENSPPRG00000005739) #23	PACSIN3 (ENSPPRG00000005994) #24	ARFGAP2 (ENSPPRG00000007483) #25	CSTPP1 (ENSPPRG00000008841) #26	LRP4 (ENSPPRG00000009649) #27	CKAP5 (ENSPPRG00000014495) #28	F2 (ENSPPRG00000015996) #29	ENSPPRG00000021564	ZNF408 (ENSPPRG00000016866) #30	ARHGAP1 (ENSPPRG00000017517) #31	ATG13 (ENSPPRG00000024435) #32	HARBI1 (ENSPPRG00000024315)	AMBRA1 (ENSPPRG00000000398) #35	CHRM4 (ENSPPRG00000021661) #36	MDK (ENSPPRG00000001591) #37
lion	MODERN SPECIES	10	AGBL2 (ENSPLOG00000007789) #9	MTCH2 (ENSPLOG00000007733) #10	ENSPLOG00000007716 #11	FAM180B (ENSPLOG00000007697)	NDUFS3 (ENSPLOG00000007679) #12	KBTBD4 (ENSPLOG00000007653) #13	ENSPLOG00000007621	CELF1 (ENSPLOG00000007570) #14	RAPSN (ENSPLOG00000007427) #15	PSMC3 (ENSPLOG00000007292) #16	SLC39A13 (ENSPLOG00000007161) #17	SPI1 (ENSPLOG00000007099) #18	MYBPC3 (ENSPLOG00000006845) #19	MADD (ENSPLOG00000006666) #20	NR1H3 (ENSPLOG00000006535) #21	ACP2 (ENSPLOG00000006391) #22	DDB2 (ENSPLOG00000006264) #23	PACSIN3 (ENSPLOG00000006189) #24	ARFGAP2 (ENSPLOG00000006001) #25	CSTPP1 (ENSPLOG00000005860) #26	LRP4 (ENSPLOG00000005745) #27	CKAP5 (ENSPLOG00000005671) #28	F2 (ENSPLOG00000005576) #29	ENSPLOG00000005532	ZNF408 (ENSPLOG00000005509) #30	ARHGAP1 (ENSPLOG00000005477) #31	ATG13 (ENSPLOG00000005426) #32	HARBI1 (ENSPLOG00000005373)	ENSPLOG00000005359	AMBRA1 (ENSPLOG00000005299) #35	CHRM4 (ENSPLOG00000005269) #36
Tiger	MODERN SPECIES	168	FNBP4 (ENSPTIG00000008430) #8	AGBL2 (ENSPTIG00000007694) #9	MTCH2 (ENSPTIG00000007190) #10	FAM180B (ENSPTIG00000007108)	NDUFS3 (ENSPTIG00000006928) #12	KBTBD4 (ENSPTIG00000006244) #13	PTPMT1 (ENSPTIG00000005838)	CELF1 (ENSPTIG00000003974) #14	RAPSN (ENSPTIG00000000869) #15	PSMC3 (ENSPTIG00000021263) #16	SLC39A13 (ENSPTIG00000021132) #17	SPI1 (ENSPTIG00000020982) #18	MYBPC3 (ENSPTIG00000020596) #19	MADD (ENSPTIG00000018995) #20	NR1H3 (ENSPTIG00000018538) #21	ACP2 (ENSPTIG00000018036) #22	DDB2 (ENSPTIG00000017739) #23	PACSIN3 (ENSPTIG00000017528) #24	ARFGAP2 (ENSPTIG00000017136) #25	CSTPP1 (ENSPTIG00000016931) #26	LRP4 (ENSPTIG00000016819) #27	CKAP5 (ENSPTIG00000015717) #28	F2 (ENSPTIG00000015545) #29	ZNF408 (ENSPTIG00000015467) #30	ARHGAP1 (ENSPTIG00000014598) #31	ATG13 (ENSPTIG00000014275) #32	HARBI1 (ENSPTIG00000014054)	AMBRA1 (ENSPTIG00000013363) #35	CHRM4 (ENSPTIG00000009949) #36	MDK (ENSPTIG00000012940) #37	DGKZ (ENSPTIG00000012708)
Cat	MODERN SPECIES	241	AGBL2 (ENSFCAG00000013803) #9	MTCH2 (ENSFCAG00000022906) #10	C1QTNF4 (ENSFCAG00000035523) #11	FAM180B (ENSFCAG00000009508)	NDUFS3 (ENSFCAG00000040734) #12	KBTBD4 (ENSFCAG00000009499) #13	ENSFCAG00000042609	CELF1 (ENSFCAG00000002535) #14	RAPSN (ENSFCAG00000002534) #15	PSMC3 (ENSFCAG00000002533) #16	SLC39A13 (ENSFCAG00000002532) #17	SPI1 (ENSFCAG00000002531) #18	MYBPC3 (ENSFCAG00000002530) #19	MADD (ENSFCAG00000002529) #20	NR1H3 (ENSFCAG00000002528) #21	ACP2 (ENSFCAG00000002527) #22	DDB2 (ENSFCAG00000025016) #23	PACSIN3 (ENSFCAG00000012631) #24	ARFGAP2 (ENSFCAG00000002525) #25	CSTPP1 (ENSFCAG00000002524) #26	LRP4 (ENSFCAG00000002523) #27	CKAP5 (ENSFCAG00000013640) #28	F2 (ENSFCAG00000029088) #29	ENSFCAG00000041074	ZNF408 (ENSFCAG00000029105) #30	ARHGAP1 (ENSFCAG00000013638) #31	ATG13 (ENSFCAG00000013637) #32	HARBI1 (ENSFCAG00000029910)	AMBRA1 (ENSFCAG00000013635) #35	CHRM4 (ENSFCAG00000024780) #36	MDK (ENSFCAG00000023547) #37
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Chiroptera	ANCESTRAL SPECIES	5	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065.f	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Microchiroptera	ANCESTRAL SPECIES	31	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065.f	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Greater horseshoe bat	MODERN SPECIES	2	ENSRFEG00010011881	MTCH2 (ENSRFEG00010011915) #10	ENSRFEG00010011954 #11	FAM180B (ENSRFEG00010011984)	NDUFS3 (ENSRFEG00010012038) #12	KBTBD4 (ENSRFEG00010012114) #13	PTPMT1 (ENSRFEG00010012248)	CELF1 (ENSRFEG00010012300) #14	RAPSN (ENSRFEG00010012492) #15	PSMC3 (ENSRFEG00010012635) #16	SLC39A13 (ENSRFEG00010012772) #17	SPI1 (ENSRFEG00010012946) #18	MYBPC3 (ENSRFEG00010013106) #19	MADD (ENSRFEG00010014628) #20	NR1H3 (ENSRFEG00010015025) #21	ACP2 (ENSRFEG00010015250) #22	DDB2 (ENSRFEG00010015496) #23	PACSIN3 (ENSRFEG00010000575) #24	ARFGAP2 (ENSRFEG00010000701) #25	CSTPP1 (ENSRFEG00010000992) #26	LRP4 (ENSRFEG00010001046) #27	CKAP5 (ENSRFEG00010001142) #28	F2 (ENSRFEG00010001400) #29	ZNF408 (ENSRFEG00010001453) #30	ARHGAP1 (ENSRFEG00010001486) #31	ATG13 (ENSRFEG00010001557) #32	HARBI1 (ENSRFEG00010001682)	AMBRA1 (ENSRFEG00010001788) #35	CHRM4 (ENSRFEG00010001975) #36	MDK (ENSRFEG00010001996) #37	DGKZ (ENSRFEG00010002446)
Microbat	MODERN SPECIES	1034	PTPRJ (ENSMLUG00000013225)	NUP160 (ENSMLUG00000014062) #7	FNBP4 (ENSMLUG00000011388) #8	MTCH2 (ENSMLUG00000016431) #10	FAM180B (ENSMLUG00000016658)	NDUFS3 (ENSMLUG00000016649) #12	KBTBD4 (ENSMLUG00000006745) #13	ENSMLUG00000024269	CELF1 (ENSMLUG00000016631) #14	ENSMLUG00000016626 #15	PSMC3 (ENSMLUG00000016615) #16	SLC39A13 (ENSMLUG00000016608) #17	MYBPC3 (ENSMLUG00000017650) #19	MADD (ENSMLUG00000017647) #20	NR1H3 (ENSMLUG00000017646) #21	ACP2 (ENSMLUG00000017644) #22	DDB2 (ENSMLUG00000017642) #23	PACSIN3 (ENSMLUG00000017640) #24	ARFGAP2 (ENSMLUG00000017637) #25	CSTPP1 (ENSMLUG00000017636) #26	LRP4 (ENSMLUG00000017635) #27	CKAP5 (ENSMLUG00000017633) #28	F2 (ENSMLUG00000017631) #29	ZNF408 (ENSMLUG00000017629) #30	ARHGAP1 (ENSMLUG00000017628) #31	ATG13 (ENSMLUG00000017626) #32	HARBI1 (ENSMLUG00000011485)	AMBRA1 (ENSMLUG00000009880) #35	CHRM4 (ENSMLUG00000025622) #36	MDK (ENSMLUG00000022787) #37	DGKZ (ENSMLUG00000009836)
Megabat	MODERN SPECIES	646			MTCH2 (ENSPVAG00000007348) #10	FAM180B (ENSPVAG00000007346)	NDUFS3 (ENSPVAG00000007344) #12	KBTBD4 (ENSPVAG00000007342) #13	PTPMT1 (ENSPVAG00000007341)	CELF1 (ENSPVAG00000007340) #14	RAPSN (ENSPVAG00000007339) #15	PSMC3 (ENSPVAG00000007338) #16	SLC39A13 (ENSPVAG00000007337) #17	SPI1 (ENSPVAG00000007336) #18	MYBPC3 (ENSPVAG00000007332) #19	MADD (ENSPVAG00000007324) #20	NR1H3 (ENSPVAG00000007321) #21	ACP2 (ENSPVAG00000007314) #22	DDB2 (ENSPVAG00000007310) #23
Equus	ANCESTRAL SPECIES	56	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000158775 #13	ENSGT00940000154479.a	ENSGT00390000017480.e #12	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Horse	MODERN SPECIES	3	NUP160 (ENSECAG00000021826) #7	FNBP4 (ENSECAG00000020072) #8	AGBL2 (ENSECAG00000018720) #9	MTCH2 (ENSECAG00000014198) #10	NDUFS3 (ENSECAG00000013454) #12	KBTBD4 (ENSECAG00000013258) #13	PTPMT1 (ENSECAG00000012816)	CELF1 (ENSECAG00000007741) #14	RAPSN (ENSECAG00000003289) #15	PSMC3 (ENSECAG00000024786) #16	SLC39A13 (ENSECAG00000024590) #17	SPI1 (ENSECAG00000024457) #18	MYBPC3 (ENSECAG00000024318) #19	MADD (ENSECAG00000016022) #20	NR1H3 (ENSECAG00000015726) #21	ACP2 (ENSECAG00000013128) #22	DDB2 (ENSECAG00000008711) #23	PACSIN3 (ENSECAG00000025103) #24	ARFGAP2 (ENSECAG00000024744) #25	ENSECAG00000051919	CSTPP1 (ENSECAG00000024739) #26	LRP4 (ENSECAG00000023663) #27	CKAP5 (ENSECAG00000015563) #28	F2 (ENSECAG00000011321) #29	ZNF408 (ENSECAG00000010878) #30	ARHGAP1 (ENSECAG00000009844) #31	ATG13 (ENSECAG00000024606) #32	HARBI1 (ENSECAG00000024452)	AMBRA1 (ENSECAG00000023789) #35	CHRM4 (ENSECAG00000023751) #36	ENSECAG00000029071 #37
Donkey	MODERN SPECIES	8	FNBP4 (ENSEASG00005010995) #8	AGBL2 (ENSEASG00005010911) #9	MTCH2 (ENSEASG00005010837) #10	FAM180B (ENSEASG00005035695)	ENSEASG00005010834 #12	KBTBD4 (ENSEASG00005031390) #13	PTPMT1 (ENSEASG00005037371)	CELF1 (ENSEASG00005010831) #14	RAPSN (ENSEASG00005010830) #15	PSMC3 (ENSEASG00005010810) #16	SLC39A13 (ENSEASG00005010790) #17	SPI1 (ENSEASG00005010780) #18	MYBPC3 (ENSEASG00005010750) #19	MADD (ENSEASG00005002251) #20	NR1H3 (ENSEASG00005001479) #21	ACP2 (ENSEASG00005001161) #22	DDB2 (ENSEASG00005001051) #23	PACSIN3 (ENSEASG00005000908) #24	ARFGAP2 (ENSEASG00005000180) #25	CSTPP1 (ENSEASG00005017823) #26	LRP4 (ENSEASG00005017791) #27	CKAP5 (ENSEASG00005015601) #28	F2 (ENSEASG00005015463) #29	ZNF408 (ENSEASG00005015461) #30	ARHGAP1 (ENSEASG00005015450) #31	ATG13 (ENSEASG00005015246) #32	HARBI1 (ENSEASG00005015208)	AMBRA1 (ENSEASG00005015004) #35	CHRM4 (ENSEASG00005029426) #36	MDK (ENSEASG00005029065) #37	DGKZ (ENSEASG00005014964)
Atlantogenata	ANCESTRAL SPECIES	13	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Afrotheria	ANCESTRAL SPECIES	16	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Afrotheria_a	ANCESTRAL SPECIES	17	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Elephant	MODERN SPECIES	209	FNBP4 (ENSLAFG00000015244) #8	AGBL2 (ENSLAFG00000015233) #9	MTCH2 (ENSLAFG00000017949) #10	C1QTNF4 (ENSLAFG00000017947) #11	NDUFS3 (ENSLAFG00000017939) #12	KBTBD4 (ENSLAFG00000017937) #13	PTPMT1 (ENSLAFG00000020874)	CELF1 (ENSLAFG00000003484) #14	RAPSN (ENSLAFG00000016010) #15	PSMC3 (ENSLAFG00000032142) #16	SLC39A13 (ENSLAFG00000015999) #17	SPI1 (ENSLAFG00000004062) #18	MYBPC3 (ENSLAFG00000031033) #19	MADD (ENSLAFG00000009270) #20	NR1H3 (ENSLAFG00000009267) #21	ACP2 (ENSLAFG00000025658) #22	DDB2 (ENSLAFG00000009262) #23	PACSIN3 (ENSLAFG00000016193) #24	ARFGAP2 (ENSLAFG00000013742) #25	CSTPP1 (ENSLAFG00000013736) #26	LRP4 (ENSLAFG00000013726) #27	CKAP5 (ENSLAFG00000010386) #28	F2 (ENSLAFG00000010383) #29	ZNF408 (ENSLAFG00000027848) #30	ARHGAP1 (ENSLAFG00000015141) #31	ATG13 (ENSLAFG00000015138) #32	HARBI1 (ENSLAFG00000032359)	ENSLAFG00000015123 #35	ENSLAFG00000030479 #35	CHRM4 (ENSLAFG00000026552) #36	MDK (ENSLAFG00000015119) #37
Hyrax	MODERN SPECIES	3657												SPI1 (ENSPCAG00000016572) #18	MYBPC3 (ENSPCAG00000016433) #19	MADD (ENSPCAG00000016258) #20	NR1H3 (ENSPCAG00000016194) #21	ACP2 (ENSPCAG00000016140) #22	DDB2 (ENSPCAG00000016073) #23	PACSIN3 (ENSPCAG00000015992) #24	ARFGAP2 (ENSPCAG00000015888) #25	CSTPP1 (ENSPCAG00000015812) #26
Tenrec	MODERN SPECIES	5841												ENSETEG00000000432 #18	MYBPC3 (ENSETEG00000000425) #19	MADD (ENSETEG00000000419) #20	NR1H3 (ENSETEG00000000415) #21	ACP2 (ENSETEG00000000413) #22	DDB2 (ENSETEG00000000408) #23
Xenarthra	ANCESTRAL SPECIES	19	ENSGT00390000003450 #8	ENSGT00940000160201 #9	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000154234.b #29	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152	ENSGT00940000159848
Armadillo	MODERN SPECIES	1506	FNBP4 (ENSDNOG00000013302) #8	AGBL2 (ENSDNOG00000013277) #9	C1QTNF4 (ENSDNOG00000041468) #11	FAM180B (ENSDNOG00000009566)	NDUFS3 (ENSDNOG00000009548) #12	KBTBD4 (ENSDNOG00000009543) #13	ENSDNOG00000025849	CELF1 (ENSDNOG00000009523) #14	RAPSN (ENSDNOG00000040969) #15	PSMC3 (ENSDNOG00000033470) #16	SLC39A13 (ENSDNOG00000018463) #17	SPI1 (ENSDNOG00000041462) #18	MYBPC3 (ENSDNOG00000042129) #19	MADD (ENSDNOG00000011229) #20	NR1H3 (ENSDNOG00000011206) #21	ACP2 (ENSDNOG00000044310) #22	PACSIN3 (ENSDNOG00000030783) #24	ENSDNOG00000019820 #25	ENSDNOG00000038982	CSTPP1 (ENSDNOG00000019818) #26	LRP4 (ENSDNOG00000019816) #27	CKAP5 (ENSDNOG00000012007) #28	F2 (ENSDNOG00000012528) #29	ZNF408 (ENSDNOG00000047669) #30	ARHGAP1 (ENSDNOG00000017314) #31	ATG13 (ENSDNOG00000002084) #32	HARBI1 (ENSDNOG00000002083)	ENSDNOG00000049497	AMBRA1 (ENSDNOG00000049694) #35	CHRM4 (ENSDNOG00000043079) #36	ENSDNOG00000037925 #37
Marsupialia	ANCESTRAL SPECIES	7	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.w.a #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000164059	ENSGT00930000151062 #30	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.w.a #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000164059	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152	ENSGT00940000159848
Diprotodontia	ANCESTRAL SPECIES	46	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.w.a #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000164059	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152	ENSGT00940000159848
Diprotodontia_a	ANCESTRAL SPECIES	46	ENSGT00940000160201 #9	ENSGT00390000000020.b #10	ENSGT00940000161832.a #11	ENSGT00940000154479.a	ENSGT00390000017480 #12	ENSGT00940000158775 #13	ENSGT00390000014065	ENSGT00940000158970 #14	ENSGT00390000016785 #15	ENSGT01020000230346.E.w.a #16	ENSGT00940000157349 #17	ENSGT00940000159754 #18	ENSGT00940000157698.b #19	ENSGT00940000156718 #20	ENSGT00940000159068 #21	ENSGT00940000158446 #22	ENSGT00510000047881 #23	ENSGT00950000182973.b.a #24	ENSGT00940000155568 #25	ENSGT00390000012935 #26	ENSGT00940000158287 #27	ENSGT00390000014757 #28	ENSGT00940000164059	ENSGT00940000160630 #31	ENSGT00390000007055 #32	ENSGT00940000154348.c.b.a	ENSGT00390000016223 #35	ENSGT00940000160394.a #36	ENSGT00390000007640.b #37	ENSGT00940000156152	ENSGT00940000159848
koala	MODERN SPECIES	139	AGBL2 (ENSPCIG00000016171) #9	MTCH2 (ENSPCIG00000016519) #10	ENSPCIG00000016521 #11	ENSPCIG00000037012	NDUFS3 (ENSPCIG00000016526) #12	KBTBD4 (ENSPCIG00000016600) #13	ENSPCIG00000016602	CELF1 (ENSPCIG00000022947) #14	RAPSN (ENSPCIG00000022952) #15	PSMC3 (ENSPCIG00000007254) #16	SLC39A13 (ENSPCIG00000007257) #17	SPI1 (ENSPCIG00000007258) #18	MYBPC3 (ENSPCIG00000007264) #19	MADD (ENSPCIG00000007278) #20	NR1H3 (ENSPCIG00000007281) #21	ACP2 (ENSPCIG00000007284) #22	DDB2 (ENSPCIG00000007289) #23	PACSIN3 (ENSPCIG00000007325) #24	ARFGAP2 (ENSPCIG00000007326) #25	CSTPP1 (ENSPCIG00000007328) #26	LRP4 (ENSPCIG00000007330) #27	CKAP5 (ENSPCIG00000007436) #28	ENSPCIG00000020069	ARHGAP1 (ENSPCIG00000020071) #31	ATG13 (ENSPCIG00000020075) #32	HARBI1 (ENSPCIG00000020090)	AMBRA1 (ENSPCIG00000020093) #35	CHRM4 (ENSPCIG00000020098) #36	MDK (ENSPCIG00000020100) #37	DGKZ (ENSPCIG00000020101)	CREB3L1 (ENSPCIG00000020114)
Common wonbat	MODERN SPECIES	1058	AGBL2 (ENSVURG00010009724) #9	MTCH2 (ENSVURG00010009735) #10	ENSVURG00010009744 #11	ENSVURG00010009751	NDUFS3 (ENSVURG00010009759) #12	KBTBD4 (ENSVURG00010009776) #13	ENSVURG00010009789	CELF1 (ENSVURG00010009795) #14	RAPSN (ENSVURG00010009821) #15	ENSVURG00010009856 #16	SLC39A13 (ENSVURG00010009882) #17	SPI1 (ENSVURG00010009914) #18	MYBPC3 (ENSVURG00010009939) #19	MADD (ENSVURG00010010013) #20	NR1H3 (ENSVURG00010010094) #21	ACP2 (ENSVURG00010010120) #22	DDB2 (ENSVURG00010010162) #23	PACSIN3 (ENSVURG00010010192) #24	ARFGAP2 (ENSVURG00010010235) #25	CSTPP1 (ENSVURG00010010291) #26	LRP4 (ENSVURG00010010304) #27	CKAP5 (ENSVURG00010010351) #28	ARHGAP1 (ENSVURG00010010440) #31	ATG13 (ENSVURG00010010461) #32	HARBI1 (ENSVURG00010010503)	AMBRA1 (ENSVURG00010010523) #35	CHRM4 (ENSVURG00010010600) #36	MDK (ENSVURG00010010613) #37	DGKZ (ENSVURG00010010658)	CREB3L1 (ENSVURG00010010813)	PHF21A (ENSVURG00010010860)
Wallaby	MODERN SPECIES	7273																ACP2 (ENSMEUG00000009144) #22	ENSMEUG00000009131 #23	ENSMEUG00000009113 #24
Tasmanian devil	MODERN SPECIES	5	AGBL2 (ENSSHAG00000027609) #9	MTCH2 (ENSSHAG00000017622) #10	C1QTNF4 (ENSSHAG00000030434) #11	ENSSHAG00000026627	NDUFS3 (ENSSHAG00000025275) #12	KBTBD4 (ENSSHAG00000021528) #13	ENSSHAG00000024403	CELF1 (ENSSHAG00000017438) #14	RAPSN (ENSSHAG00000017408) #15	PSMC3 (ENSSHAG00000017393) #16	SLC39A13 (ENSSHAG00000017377) #17	SPI1 (ENSSHAG00000017291) #18	MYBPC3 (ENSSHAG00000017252) #19	NR1H3 (ENSSHAG00000017152) #21	MADD (ENSSHAG00000017189) #20	ACP2 (ENSSHAG00000017126) #22	DDB2 (ENSSHAG00000017108) #23	PACSIN3 (ENSSHAG00000017065) #24	ENSSHAG00000023512 #25	CSTPP1 (ENSSHAG00000032264) #26	LRP4 (ENSSHAG00000016580) #27	CKAP5 (ENSSHAG00000016386) #28	ENSSHAG00000016366	ARHGAP1 (ENSSHAG00000016324) #31	HARBI1 (ENSSHAG00000016218)	ATG13 (ENSSHAG00000016284) #32	AMBRA1 (ENSSHAG00000015742) #35	ENSSHAG00000030675 #36	DGKZ (ENSSHAG00000026033)	CREB3L1 (ENSSHAG00000015230)	PHF21A (ENSSHAG00000014057)
Opossum	MODERN SPECIES	4	FNBP4 (ENSMODG00000019921) #8	AGBL2 (ENSMODG00000019920) #9	MTCH2 (ENSMODG00000019919) #10	ENSMODG00000024428	ENSMODG00000019916 #12	KBTBD4 (ENSMODG00000019915) #13	ENSMODG00000019914	CELF1 (ENSMODG00000019913) #14	RAPSN (ENSMODG00000041760) #15	ENSMODG00000019911 #16	SLC39A13 (ENSMODG00000019910) #17	SPI1 (ENSMODG00000019909) #18	MYBPC3 (ENSMODG00000019908) #19	MADD (ENSMODG00000019907) #20	NR1H3 (ENSMODG00000019906) #21	ACP2 (ENSMODG00000019905) #22	ENSMODG00000019904 #23	PACSIN3 (ENSMODG00000019903) #24	ARFGAP2 (ENSMODG00000019901) #25	CSTPP1 (ENSMODG00000019899) #26	ENSMODG00000019900	LRP4 (ENSMODG00000019898) #27	CKAP5 (ENSMODG00000019897) #28	ENSMODG00000019896	ZNF408 (ENSMODG00000019895) #30	ARHGAP1 (ENSMODG00000019894) #31	ATG13 (ENSMODG00000019893) #32	HARBI1 (ENSMODG00000019892)	AMBRA1 (ENSMODG00000019891) #35	CHRM4 (ENSMODG00000019889) #36	CREB3L1 (ENSMODG00000019888)
Platypus	MODERN SPECIES	14	FNBP4 (ENSOANG00000007909) #8	AGBL2 (ENSOANG00000007906) #9	MTCH2 (ENSOANG00000007903) #10	ENSOANG00000007902 #11	NDUFS3 (ENSOANG00000007900) #12	KBTBD4 (ENSOANG00000007899) #13	ENSOANG00000050504	CELF1 (ENSOANG00000007896) #14	RAPSN (ENSOANG00000007894) #15	PSMC3 (ENSOANG00000040187) #16	SLC39A13 (ENSOANG00000007890) #17	SPI1 (ENSOANG00000050063) #18	MYBPC3 (ENSOANG00000007889) #19	MADD (ENSOANG00000007884) #20	NR1H3 (ENSOANG00000006250) #21	ACP2 (ENSOANG00000048933) #22	DDB2 (ENSOANG00000006247) #23	PACSIN3 (ENSOANG00000004082) #24	ARFGAP2 (ENSOANG00000004083) #25	CSTPP1 (ENSOANG00000031094) #26	LRP4 (ENSOANG00000001954) #27	CKAP5 (ENSOANG00000002765) #28	ENSOANG00000002767	ARHGAP1 (ENSOANG00000002770) #31	ATG13 (ENSOANG00000006550) #32	HARBI1 (ENSOANG00000004814)	AMBRA1 (ENSOANG00000014521) #35	CHRM4 (ENSOANG00000045540) #36	MDK (ENSOANG00000037361) #37	DGKZ (ENSOANG00000003635)	CREB3L1 (ENSOANG00000005356)