Chordata	ANCESTRAL SPECIES																	ENSGT00940000159952 #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000159952 #22
Gnathostomata	ANCESTRAL SPECIES	58															ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.a.a	ENSGT00950000183076.a.b.b.a.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667
Euteleostomi	ANCESTRAL SPECIES	1	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00940000174521	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Sarcopterygii	ANCESTRAL SPECIES	1	ENSGT00390000017443	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00940000174521	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305
Tetrapoda	ANCESTRAL SPECIES	2	ENSGT00390000017443	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305
Amniota	ANCESTRAL SPECIES	4	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Mammalia	ANCESTRAL SPECIES	10	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Theria	ANCESTRAL SPECIES	11	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Eutheria	ANCESTRAL SPECIES	6	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00940000170540	ENSGT01050000246247	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT01050000246247	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Glires	ANCESTRAL SPECIES	7	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Rodentia	ANCESTRAL SPECIES	7	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Hystricomorpha	ANCESTRAL SPECIES	31		ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305
Hystricomorpha_a	ANCESTRAL SPECIES	72		ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305
Hystricomorpha_b	ANCESTRAL SPECIES	95		ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305	ENSGT00940000162618
Degu	MODERN SPECIES	279	JMY (ENSODEG00000003622) #7	BHMT (ENSODEG00000003547) #8	BHMT2 (ENSODEG00000003503) #9	DMGDH (ENSODEG00000003394) #10	ARSB (ENSODEG00000003302) #11	ENSODEG00000003273 #12	LHFPL2 (ENSODEG00000003251) #13	SCAMP1 (ENSODEG00000001895) #14	ENSODEG00000001866 #15	ENSODEG00000001855 #16	AP3B1 (ENSODEG00000001757) #17	ENSODEG00000001711 #18	ENSODEG00000018773 #19	ENSODEG00000018710 #20	ENSODEG00000001698 #21	OTP (ENSODEG00000001674) #22
Long-tailed chinchilla	MODERN SPECIES	132	MTX3 (ENSCLAG00000011076)	CMYA5 (ENSCLAG00000009334)	TENT2 (ENSCLAG00000010023)	HOMER1 (ENSCLAG00000010571)	JMY (ENSCLAG00000009333) #7	BHMT (ENSCLAG00000010253) #8	BHMT2 (ENSCLAG00000013633) #9	DMGDH (ENSCLAG00000014854) #10	ARSB (ENSCLAG00000013316) #11	ENSCLAG00000009820	LHFPL2 (ENSCLAG00000010028) #13	SCAMP1 (ENSCLAG00000010430) #14	ENSCLAG00000017966	AP3B1 (ENSCLAG00000017374) #17	TBCA (ENSCLAG00000011463) #21	OTP (ENSCLAG00000011647) #22	WDR41 (ENSCLAG00000010095)	PDE8B (ENSCLAG00000011619)	AGGF1 (ENSCLAG00000012928)	CRHBP (ENSCLAG00000009942)	S100Z (ENSCLAG00000010354)	F2RL1 (ENSCLAG00000010304)	IQGAP2 (ENSCLAG00000011435)	F2RL2 (ENSCLAG00000012739)	SV2C (ENSCLAG00000013949)	POC5 (ENSCLAG00000009830)	ANKDD1B (ENSCLAG00000010494)	POLK (ENSCLAG00000011236)	CERT1 (ENSCLAG00000011527)	HMGCR (ENSCLAG00000010132)	ANKRD31 (ENSCLAG00000011065)
Guinea pig	MODERN SPECIES	83	PARP4 (ENSCPOG00000014672)	THBS4 (ENSCPOG00000004926)	MTX3 (ENSCPOG00000024084)	CMYA5 (ENSCPOG00000036038)	TENT2 (ENSCPOG00000005462)	HOMER1 (ENSCPOG00000007454)	JMY (ENSCPOG00000008290) #7	BHMT (ENSCPOG00000039971) #8	BHMT2 (ENSCPOG00000004265) #9	DMGDH (ENSCPOG00000001913) #10	ARSB (ENSCPOG00000040291) #11	LHFPL2 (ENSCPOG00000035182) #13	SCAMP1 (ENSCPOG00000038700) #14	AP3B1 (ENSCPOG00000000479) #17	TBCA (ENSCPOG00000035914) #21	OTP (ENSCPOG00000009888) #22	WDR41 (ENSCPOG00000001183)	PDE8B (ENSCPOG00000001181)	AGGF1 (ENSCPOG00000003545)
Naked mole-rat female	MODERN SPECIES	7	TENT2 (ENSHGLG00000008742)	HOMER1 (ENSHGLG00000001109)	JMY (ENSHGLG00000002781) #7	ENSHGLG00000045617	BHMT (ENSHGLG00000050585) #8	BHMT2 (ENSHGLG00000036952) #9	DMGDH (ENSHGLG00000000837) #10	ARSB (ENSHGLG00000000586) #11	ENSHGLG00000000380	ENSHGLG00000040355	ENSHGLG00000035099	SCAMP1 (ENSHGLG00000048514) #14	AP3B1 (ENSHGLG00000001480) #17	ENSHGLG00000019786	ENSHGLG00000000425 #21	OTP (ENSHGLG00000003908) #22	ENSHGLG00000017808	ENSHGLG00000038347	ENSHGLG00000041303	ENSHGLG00000002178	ENSHGLG00000038975	ZBED3 (ENSHGLG00000042521)	AGGF1 (ENSHGLG00000000455)	ENSHGLG00000001729	ENSHGLG00000001594	S100Z (ENSHGLG00000047331)	ENSHGLG00000044569	ENSHGLG00000000412	ENSHGLG00000001189	F2RL2 (ENSHGLG00000001444)	ENSHGLG00000001079
Sciuridae	ANCESTRAL SPECIES	18	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00940000163369	ENSGT00940000153352.A	ENSGT00940000161793	ENSGT00390000012762	ENSGT00940000155949	ENSGT00390000018319.a.b.a	ENSGT00940000155897	ENSGT00390000007246	ENSGT00390000009329.b	ENSGT00940000155498	ENSGT01100000263506.b.b
Marmotini	ANCESTRAL SPECIES	23	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00940000163369	ENSGT00940000153352.A	ENSGT00940000161793	ENSGT00390000012762	ENSGT00940000155949	ENSGT00390000018319.a.b.a	ENSGT00940000155897	ENSGT00390000007246	ENSGT00390000009329.b	ENSGT00940000155498	ENSGT01100000263506.b.b
Marmotini_b	ANCESTRAL SPECIES	92	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00940000163369	ENSGT00940000153352.A	ENSGT00940000161793	ENSGT00390000012762	ENSGT00940000155949	ENSGT00390000018319.a.b.a	ENSGT00940000155897	ENSGT00390000007246	ENSGT00390000009329.b	ENSGT00940000155498	ENSGT01100000263506.b.b
Arctic ground squirrel	MODERN SPECIES	118					HOMER1 (ENSUPAG00010013346)	JMY (ENSUPAG00010013443) #7	ENSUPAG00010013477	BHMT (ENSUPAG00010013490) #8	BHMT2 (ENSUPAG00010013504) #9	DMGDH (ENSUPAG00010013523) #10	ARSB (ENSUPAG00010013552) #11	LHFPL2 (ENSUPAG00010013572) #13	SCAMP1 (ENSUPAG00010013586) #14	AP3B1 (ENSUPAG00010013612) #17	TBCA (ENSUPAG00010013662) #21	OTP (ENSUPAG00010013666) #22	WDR41 (ENSUPAG00010013668)	PDE8B (ENSUPAG00010013724)	ZBED3 (ENSUPAG00010014432)	AGGF1 (ENSUPAG00010014439)	ENSUPAG00010014488	ENSUPAG00010014496	ENSUPAG00010014578	ENSUPAG00010014599	BDP1 (ENSUPAG00010014613)	MCCC2 (ENSUPAG00010014643)	CARTPT (ENSUPAG00010014708)	MAP1B (ENSUPAG00010014748)	MRPS27 (ENSUPAG00010014772)	PTCD2 (ENSUPAG00010014797)	ZNF366 (ENSUPAG00010014827)
Squirrel	MODERN SPECIES	149	ENSSTOG00000025704	SERINC5 (ENSSTOG00000009098)	THBS4 (ENSSTOG00000009080)	MTX3 (ENSSTOG00000023002)	TENT2 (ENSSTOG00000027293)	HOMER1 (ENSSTOG00000003164)	JMY (ENSSTOG00000021490) #7	BHMT (ENSSTOG00000005887) #8	BHMT2 (ENSSTOG00000005871) #9	DMGDH (ENSSTOG00000005837) #10	ARSB (ENSSTOG00000005818) #11	LHFPL2 (ENSSTOG00000004457) #13	SCAMP1 (ENSSTOG00000023531) #14	AP3B1 (ENSSTOG00000014099) #17	TBCA (ENSSTOG00000009840) #21	OTP (ENSSTOG00000007544) #22	WDR41 (ENSSTOG00000028633)	PDE8B (ENSSTOG00000001468)	ZBED3 (ENSSTOG00000003989)	AGGF1 (ENSSTOG00000021590)	ENSSTOG00000023234	ENSSTOG00000012288	ENSSTOG00000028701	ENSSTOG00000033438	MCCC2 (ENSSTOG00000009830)	CARTPT (ENSSTOG00000009852)	MAP1B (ENSSTOG00000002245)	MRPS27 (ENSSTOG00000006565)	PTCD2 (ENSSTOG00000006596)	ZNF366 (ENSSTOG00000029102)	ENSSTOG00000024390
Eurasian red squirrel	MODERN SPECIES	15	MTX3 (ENSSVLG00005012299)	CMYA5 (ENSSVLG00005012391)	TENT2 (ENSSVLG00005012556)	HOMER1 (ENSSVLG00005012639)	ENSSVLG00005013053	JMY (ENSSVLG00005013142) #7	BHMT (ENSSVLG00005013463) #8	ENSSVLG00005013529	BHMT2 (ENSSVLG00005013681) #9	DMGDH (ENSSVLG00005013801) #10	ARSB (ENSSVLG00005013953) #11	LHFPL2 (ENSSVLG00005014202) #13	SCAMP1 (ENSSVLG00005014260) #14	AP3B1 (ENSSVLG00005014385) #17	TBCA (ENSSVLG00005014739) #21	OTP (ENSSVLG00005014921) #22	WDR41 (ENSSVLG00005014989)	PDE8B (ENSSVLG00005004357)	ENSSVLG00005004554	ENSSVLG00005004578	ENSSVLG00005004600	AGGF1 (ENSSVLG00005004621)	NAIP (ENSSVLG00005004669)	ENSSVLG00005004790	ENSSVLG00005004899	ENSSVLG00005004921	MCCC2 (ENSSVLG00005004953)	ENSSVLG00005004973	CARTPT (ENSSVLG00005004989)	MAP1B (ENSSVLG00005005010)	MRPS27 (ENSSVLG00005005039)
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Myomorpha	ANCESTRAL SPECIES	5	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Muroidea	ANCESTRAL SPECIES	4	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Cricetidae	ANCESTRAL SPECIES	11	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Cricetinae	ANCESTRAL SPECIES	7	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Chinese hamster chok1gshd	MODERN SPECIES	1	Thbs4 (ENSCGRG00001016664)	Mtx3 (ENSCGRG00001011412)	ENSCGRG00001008349	Cmya5 (ENSCGRG00001003968)	Tent2 (ENSCGRG00001009951)	Homer1 (ENSCGRG00001013582)	Jmy (ENSCGRG00001018071) #7	ENSCGRG00001019116 #8	Bhmt2 (ENSCGRG00001007704) #9	Dmgdh (ENSCGRG00001014647) #10	Arsb (ENSCGRG00001015736) #11	Lhfpl2 (ENSCGRG00001003627) #13	Scamp1 (ENSCGRG00001004428) #14	Ap3b1 (ENSCGRG00001009397) #17	Tbca (ENSCGRG00001021971) #21	Otp (ENSCGRG00001022392) #22	ENSCGRG00001008932	Wdr41 (ENSCGRG00001008129)	Pde8b (ENSCGRG00001015606)	Zbed3 (ENSCGRG00001010271)	Aggf1 (ENSCGRG00001017039)	Crhbp (ENSCGRG00001008314)	S100z (ENSCGRG00001009971)	F2rl1 (ENSCGRG00001012796)	F2r (ENSCGRG00001016531)	Iqgap2 (ENSCGRG00001019858)	F2rl2 (ENSCGRG00001014616)	Sv2c (ENSCGRG00001015770)	Poc5 (ENSCGRG00001015817)	Ankdd1b (ENSCGRG00001016471)	ENSCGRG00001012277
Golden Hamster	MODERN SPECIES	620	Zfyve16 (ENSMAUG00000001716)	Serinc5 (ENSMAUG00000009651)	Thbs4 (ENSMAUG00000009316)	Mtx3 (ENSMAUG00000022165)	Tent2 (ENSMAUG00000012442)	Homer1 (ENSMAUG00000011151)	Jmy (ENSMAUG00000015175) #7	ENSMAUG00000004226 #8	Bhmt2 (ENSMAUG00000008057) #9	Dmgdh (ENSMAUG00000011337) #10	Arsb (ENSMAUG00000005115) #11	Lhfpl2 (ENSMAUG00000020241) #13	Scamp1 (ENSMAUG00000018961) #14	Ap3b1 (ENSMAUG00000001490) #17	Tbca (ENSMAUG00000018233) #21	Otp (ENSMAUG00000007760) #22	Wdr41 (ENSMAUG00000004461)	Pde8b (ENSMAUG00000015472)	Aggf1 (ENSMAUG00000012678)	Crhbp (ENSMAUG00000010702)	S100z (ENSMAUG00000001531)	F2rl1 (ENSMAUG00000012126)	F2r (ENSMAUG00000010556)	F2rl2 (ENSMAUG00000015710)	Iqgap2 (ENSMAUG00000022130)	Sv2c (ENSMAUG00000005414)	Poc5 (ENSMAUG00000003174)	Ankdd1b (ENSMAUG00000018964)	Polk (ENSMAUG00000016560)	Cert1 (ENSMAUG00000019472)	Hmgcr (ENSMAUG00000012278)
Cricetidae_B	ANCESTRAL SPECIES	40	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Prairie vole	MODERN SPECIES	6	Mtx3 (ENSMOCG00000017246)	Cmya5 (ENSMOCG00000020302)	Tent2 (ENSMOCG00000013416)	Homer1 (ENSMOCG00000003233)	Jmy (ENSMOCG00000000972) #7	ENSMOCG00000012797 #8	Bhmt2 (ENSMOCG00000018570) #9	Dmgdh (ENSMOCG00000004222) #10	Arsb (ENSMOCG00000000278) #11	Lhfpl2 (ENSMOCG00000001998) #13	Scamp1 (ENSMOCG00000001373) #14	Ap3b1 (ENSMOCG00000017264) #17	ENSMOCG00000005321	ENSMOCG00000006493	Tbca (ENSMOCG00000005814) #21	Otp (ENSMOCG00000019228) #22	ENSMOCG00000006214	Wdr41 (ENSMOCG00000006320)	Pde8b (ENSMOCG00000012277)	Zbed3 (ENSMOCG00000011692)	Aggf1 (ENSMOCG00000003377)	ENSMOCG00000001987	Crhbp (ENSMOCG00000021245)	S100z (ENSMOCG00000020194)	F2rl1 (ENSMOCG00000013582)	F2r (ENSMOCG00000012362)	F2rl2 (ENSMOCG00000008663)	Iqgap2 (ENSMOCG00000002734)	Sv2c (ENSMOCG00000021524)	Poc5 (ENSMOCG00000009038)	Ankdd1b (ENSMOCG00000003243)
Murinae	ANCESTRAL SPECIES	24	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Mus	ANCESTRAL SPECIES	22	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00900000143364	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Mus_A	ANCESTRAL SPECIES	14	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00900000143364	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Mus_B	ANCESTRAL SPECIES	13	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00900000143364	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Mus_C	ANCESTRAL SPECIES	10	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00900000143364	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.c	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Steppe mouse	MODERN SPECIES	3412	Cmya5 (ENSMSIG00000012218)	Tent2 (ENSMSIG00000012117)	Homer1 (ENSMSIG00000011873)	ENSMSIG00000011865	ENSMSIG00000011858	ENSMSIG00000011824	Jmy (ENSMSIG00000011806) #7	ENSMSIG00000011793	Bhmt2 (ENSMSIG00000011736) #9	Dmgdh (ENSMSIG00000011670) #10	Arsb (ENSMSIG00000011652) #11	Lhfpl2 (ENSMSIG00000011618) #13	Scamp1 (ENSMSIG00000011596) #14	Ap3b1 (ENSMSIG00000011521) #17	ENSMSIG00000011491 #21	Otp (ENSMSIG00000011481) #22	ENSMSIG00000011421	Pde8b (ENSMSIG00000011209)	ENSMSIG00000011178	Aggf1 (ENSMSIG00000011146)	Crhbp (ENSMSIG00000011120)	S100z (ENSMSIG00000011096)	F2rl1 (ENSMSIG00000011086)	F2r (ENSMSIG00000011072)	F2rl2 (ENSMSIG00000011060)	Iqgap2 (ENSMSIG00000011044)
spretus	MODERN SPECIES	4	Thbs4 (MGP_SPRETEiJ_G0019659)	Mtx3 (MGP_SPRETEiJ_G0019660)	Cmya5 (MGP_SPRETEiJ_G0019661)	Tent2 (MGP_SPRETEiJ_G0019662)	Homer1 (MGP_SPRETEiJ_G0019663)	Jmy (MGP_SPRETEiJ_G0019664) #7	MGP_SPRETEiJ_G0019665 #8	Bhmt2 (MGP_SPRETEiJ_G0019666) #9	Dmgdh (MGP_SPRETEiJ_G0019667) #10	Arsb (MGP_SPRETEiJ_G0019668) #11	Lhfpl2 (MGP_SPRETEiJ_G0019669) #13	Scamp1 (MGP_SPRETEiJ_G0019670) #14	MGP_SPRETEiJ_G0019671	Ap3b1 (MGP_SPRETEiJ_G0019672) #17	Tbca (MGP_SPRETEiJ_G0019673) #21	Otp (MGP_SPRETEiJ_G0019674) #22	MGP_SPRETEiJ_G0019675	Pde8b (MGP_SPRETEiJ_G0019676)	Zbed3 (MGP_SPRETEiJ_G0019677)	Aggf1 (MGP_SPRETEiJ_G0019678)	Crhbp (MGP_SPRETEiJ_G0019679)	S100z (MGP_SPRETEiJ_G0019680)	F2rl1 (MGP_SPRETEiJ_G0019681)	F2r (MGP_SPRETEiJ_G0019682)	Iqgap2 (MGP_SPRETEiJ_G0019683)	F2rl2 (MGP_SPRETEiJ_G0019684)	Sv2c (MGP_SPRETEiJ_G0019685)	Poc5 (MGP_SPRETEiJ_G0019686)	Ankdd1b (MGP_SPRETEiJ_G0019687)	Polk (MGP_SPRETEiJ_G0019688)	MGP_SPRETEiJ_G0019689
Mouse	MODERN SPECIES	4	Serinc5 (ENSMUSG00000021703)	Thbs4 (ENSMUSG00000021702)	Mtx3 (ENSMUSG00000021704)	Cmya5 (ENSMUSG00000047419)	Tent2 (ENSMUSG00000042167)	Homer1 (ENSMUSG00000007617)	Jmy (ENSMUSG00000021690) #7	Bhmt (ENSMUSG00000074768) #8	Bhmt2 (ENSMUSG00000042118) #9	Dmgdh (ENSMUSG00000042102) #10	Arsb (ENSMUSG00000042082) #11	Lhfpl2 (ENSMUSG00000045312) #13	Scamp1 (ENSMUSG00000021687) #14	Ap3b1 (ENSMUSG00000021686) #17	Tbca (ENSMUSG00000042043) #21	Otp (ENSMUSG00000021685) #22	Wdr41 (ENSMUSG00000042015)	Pde8b (ENSMUSG00000021684)	Zbed3 (ENSMUSG00000041995)	Aggf1 (ENSMUSG00000021681)	Crhbp (ENSMUSG00000021680)	S100z (ENSMUSG00000021679)	F2rl1 (ENSMUSG00000021678)	F2r (ENSMUSG00000048376)	Iqgap2 (ENSMUSG00000021676)	F2rl2 (ENSMUSG00000021675)	Sv2c (ENSMUSG00000051111)	Btf3l4b (ENSMUSG00000114133)	Poc5 (ENSMUSG00000021671)	Ankdd1b (ENSMUSG00000047117)	Polk (ENSMUSG00000021668)
Ryukyu mouse	MODERN SPECIES	4	MGP_CAROLIEiJ_G0018776	Tent2 (MGP_CAROLIEiJ_G0018777)	Homer1 (MGP_CAROLIEiJ_G0018778)	Jmy (MGP_CAROLIEiJ_G0018779) #7	MGP_CAROLIEiJ_G0018780 #8	Bhmt2 (MGP_CAROLIEiJ_G0018781) #9	Dmgdh (MGP_CAROLIEiJ_G0018782) #10	MGP_CAROLIEiJ_G0018783	Arsb (MGP_CAROLIEiJ_G0018784) #11	MGP_CAROLIEiJ_G0018785	Lhfpl2 (MGP_CAROLIEiJ_G0018786) #13	Scamp1 (MGP_CAROLIEiJ_G0018787) #14	MGP_CAROLIEiJ_G0018788	Ap3b1 (MGP_CAROLIEiJ_G0018789) #17	Tbca (MGP_CAROLIEiJ_G0018790) #21	Otp (MGP_CAROLIEiJ_G0018791) #22	MGP_CAROLIEiJ_G0018792	Pde8b (MGP_CAROLIEiJ_G0018793)	Zbed3 (MGP_CAROLIEiJ_G0018794)	Aggf1 (MGP_CAROLIEiJ_G0018795)	Crhbp (MGP_CAROLIEiJ_G0018796)	S100z (MGP_CAROLIEiJ_G0018797)	F2rl1 (MGP_CAROLIEiJ_G0018798)	F2r (MGP_CAROLIEiJ_G0018799)	Iqgap2 (MGP_CAROLIEiJ_G0018800)	F2rl2 (MGP_CAROLIEiJ_G0018801)	Sv2c (MGP_CAROLIEiJ_G0018802)	Poc5 (MGP_CAROLIEiJ_G0018803)	Ankdd1b (MGP_CAROLIEiJ_G0018804)	Polk (MGP_CAROLIEiJ_G0018805)	MGP_CAROLIEiJ_G0018806
Shrew mouse	MODERN SPECIES	2	Thbs4 (MGP_PahariEiJ_G0015853)	Mtx3 (MGP_PahariEiJ_G0015854)	Cmya5 (MGP_PahariEiJ_G0015855)	Tent2 (MGP_PahariEiJ_G0015856)	Homer1 (MGP_PahariEiJ_G0015857)	Jmy (MGP_PahariEiJ_G0015858) #7	MGP_PahariEiJ_G0015859 #8	MGP_PahariEiJ_G0015860 ##8	Dmgdh (MGP_PahariEiJ_G0015861) #10	Arsb (MGP_PahariEiJ_G0015862) #11	Lhfpl2 (MGP_PahariEiJ_G0015863) #13	Scamp1 (MGP_PahariEiJ_G0015864) #14	MGP_PahariEiJ_G0015865	Ap3b1 (MGP_PahariEiJ_G0015866) #17	Tbca (MGP_PahariEiJ_G0015867) #21	Otp (MGP_PahariEiJ_G0015868) #22	MGP_PahariEiJ_G0015869	Pde8b (MGP_PahariEiJ_G0015870)	Zbed3 (MGP_PahariEiJ_G0015871)	Aggf1 (MGP_PahariEiJ_G0015872)	Crhbp (MGP_PahariEiJ_G0015873)	S100z (MGP_PahariEiJ_G0015874)	F2rl1 (MGP_PahariEiJ_G0015875)	F2r (MGP_PahariEiJ_G0015876)	Iqgap2 (MGP_PahariEiJ_G0015877)	F2rl2 (MGP_PahariEiJ_G0015878)	Sv2c (MGP_PahariEiJ_G0015879)	Poc5 (MGP_PahariEiJ_G0015880)	Ankdd1b (MGP_PahariEiJ_G0015881)	Polk (MGP_PahariEiJ_G0015882)	MGP_PahariEiJ_G0015883
Rat	MODERN SPECIES	11	Cmya5 (ENSRNOG00000023803)	Tent2 (ENSRNOG00000012099)	Homer1 (ENSRNOG00000047014)	Jmy (ENSRNOG00000050343) #7	Bhmt (ENSRNOG00000011200) #8	AABR07007675.2 (ENSRNOG00000058886)	LOC103691423 (ENSRNOG00000029988)	Bhmt2 (ENSRNOG00000040120) #9	Dmgdh (ENSRNOG00000023588) #10	Arsb (ENSRNOG00000011150) #11	Lhfpl2 (ENSRNOG00000011032) #13	Scamp1 (ENSRNOG00000061582) #14	Ap3b1 (ENSRNOG00000010624) #17	ENSRNOG00000068970	Tbca (ENSRNOG00000048342) #21	Otp (ENSRNOG00000010560) #22	Wdr41 (ENSRNOG00000025462)	Pde8b (ENSRNOG00000010280)	ENSRNOG00000067662	LOC100912266 (ENSRNOG00000059441)	Zbed3 (ENSRNOG00000028941)	ENSRNOG00000063007	Aggf1 (ENSRNOG00000029304)	Crhbp (ENSRNOG00000017890)	S100z (ENSRNOG00000017998)	F2rl1 (ENSRNOG00000018003)	AABR07007730.1 (ENSRNOG00000018045)	F2r (ENSRNOG00000048043)	Iqgap2 (ENSRNOG00000025406)	F2rl2 (ENSRNOG00000018054)	Sv2c (ENSRNOG00000018094)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1748													ENSNGAG00000011149	Ap3b1 (ENSNGAG00000015487) #17	Tbca (ENSNGAG00000020367) #21	Otp (ENSNGAG00000016224) #22	ENSNGAG00000018792	Pde8b (ENSNGAG00000003750)	Zbed3 (ENSNGAG00000000806)	Aggf1 (ENSNGAG00000008354)	Crhbp (ENSNGAG00000013680)	S100z (ENSNGAG00000014093)	F2rl1 (ENSNGAG00000019243)	F2r (ENSNGAG00000001548)	Iqgap2 (ENSNGAG00000005917)	F2rl2 (ENSNGAG00000013049)	Sv2c (ENSNGAG00000014621)
Lesser Egyptian jerboa	MODERN SPECIES	45	Thbs4 (ENSJJAG00000014572)	Mtx3 (ENSJJAG00000022368)	Cmya5 (ENSJJAG00000020442)	Tent2 (ENSJJAG00000015469)	ENSJJAG00000012875	Homer1 (ENSJJAG00000014750)	Jmy (ENSJJAG00000015924) #7	ENSJJAG00000022436 #8	Bhmt2 (ENSJJAG00000011883) #9	Dmgdh (ENSJJAG00000011285) #10	Arsb (ENSJJAG00000011676) #11	Lhfpl2 (ENSJJAG00000016377) #13	Scamp1 (ENSJJAG00000015531) #14	Ap3b1 (ENSJJAG00000017048) #17	ENSJJAG00000010595 #21	Otp (ENSJJAG00000018309) #22	ENSJJAG00000014477	Pde8b (ENSJJAG00000023506)	Zbed3 (ENSJJAG00000018785)	Aggf1 (ENSJJAG00000012003)
Kangaroo rat	MODERN SPECIES	347	Zfyve16 (ENSDORG00000002451)	Serinc5 (ENSDORG00000005075)	Thbs4 (ENSDORG00000005073)	Mtx3 (ENSDORG00000028356)	Cmya5 (ENSDORG00000026339)	Tent2 (ENSDORG00000007850)	Homer1 (ENSDORG00000009374)	Jmy (ENSDORG00000005525) #7	ENSDORG00000025667 #8	Dmgdh (ENSDORG00000000991) #10	Arsb (ENSDORG00000009219) #11	Lhfpl2 (ENSDORG00000027446) #13	Scamp1 (ENSDORG00000011767) #14	Ap3b1 (ENSDORG00000009609) #17	Tbca (ENSDORG00000026937) #21	Otp (ENSDORG00000014140) #22	ENSDORG00000006071	Pde8b (ENSDORG00000006070)	Aggf1 (ENSDORG00000005780)	Trim23 (ENSDORG00000008476)	Trappc13 (ENSDORG00000008478)	Sgtb (ENSDORG00000008484)	Nln (ENSDORG00000008485)	Erbin (ENSDORG00000005290)	ENSDORG00000023160	ENSDORG00000023425	ENSDORG00000027648	Cd180 (ENSDORG00000002654)	Pik3r1 (ENSDORG00000024967)	Slc30a5 (ENSDORG00000003790)	ENSDORG00000005904
Primates	ANCESTRAL SPECIES	8	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT01050000246247	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710.e #21	ENSGT00390000009710.f #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667
Lemuriformes	ANCESTRAL SPECIES	37	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710.e #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Lemuriformes_a	ANCESTRAL SPECIES	43	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710.e #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT00950000183076.b	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305
Greater bamboo lemur	MODERN SPECIES	488	THBS4 (ENSPSMG00000022760)	MTX3 (ENSPSMG00000022719)	CMYA5 (ENSPSMG00000022711)	TENT2 (ENSPSMG00000022674)	HOMER1 (ENSPSMG00000022599)	JMY (ENSPSMG00000022524) #7	ENSPSMG00000022516	BHMT (ENSPSMG00000022496) #8	BHMT2 (ENSPSMG00000022458) #9	DMGDH (ENSPSMG00000022423) #10	ARSB (ENSPSMG00000022382) #11	LHFPL2 (ENSPSMG00000022352) #13	SCAMP1 (ENSPSMG00000022346) #14	AP3B1 (ENSPSMG00000022301) #17	TBCA (ENSPSMG00000022229) #21	OTP (ENSPSMG00000022216) #22	WDR41 (ENSPSMG00000022198)	PDE8B (ENSPSMG00000022043)	AGGF1 (ENSPSMG00000021774)	CRHBP (ENSPSMG00000021746)	S100Z (ENSPSMG00000021731)	F2RL1 (ENSPSMG00000021725)
Coquerels sifaka	MODERN SPECIES	999	THBS4 (ENSPCOG00000026127)	MTX3 (ENSPCOG00000024492)	CMYA5 (ENSPCOG00000025300)	TENT2 (ENSPCOG00000000920)	HOMER1 (ENSPCOG00000026991)	JMY (ENSPCOG00000019253) #7	BHMT (ENSPCOG00000000488) #8	BHMT2 (ENSPCOG00000027821) #9	DMGDH (ENSPCOG00000014759) #10	ARSB (ENSPCOG00000024261) #11	LHFPL2 (ENSPCOG00000006098) #13	SCAMP1 (ENSPCOG00000022266) #14	ENSPCOG00000004066 #17	ENSPCOG00000012906	TBCA (ENSPCOG00000005770) #21	OTP (ENSPCOG00000028773) #22	WDR41 (ENSPCOG00000019741)	PDE8B (ENSPCOG00000017117)	AGGF1 (ENSPCOG00000026723)	CRHBP (ENSPCOG00000026267)	S100Z (ENSPCOG00000005734)	F2RL1 (ENSPCOG00000015685)	IQGAP2 (ENSPCOG00000026521)	F2RL2 (ENSPCOG00000018657)	SV2C (ENSPCOG00000018991)	POC5 (ENSPCOG00000025218)	ANKDD1B (ENSPCOG00000020302)	POLK (ENSPCOG00000027526)	CERT1 (ENSPCOG00000016749)	HMGCR (ENSPCOG00000016696)	ANKRD31 (ENSPCOG00000017441)
Mouse lemur	MODERN SPECIES	3	SETD9 (ENSMICG00000000429)	MIER3 (ENSMICG00000032965)	ENSMICG00000014678	ACTBL2 (ENSMICG00000014700)	PLK2 (ENSMICG00000014702)	RAB3C (ENSMICG00000002783)	PDE4D (ENSMICG00000014743)	ENSMICG00000029043	ENSMICG00000031463	ENSMICG00000045425	DEPDC1B (ENSMICG00000013552)	ELOVL7 (ENSMICG00000042937)	ERCC8 (ENSMICG00000008906)	ENSMICG00000044997	ENSMICG00000016668 #21	OTP (ENSMICG00000030234) #22	WDR41 (ENSMICG00000016642)	PDE8B (ENSMICG00000016635)	AGGF1 (ENSMICG00000028679)	CRHBP (ENSMICG00000034984)	S100Z (ENSMICG00000026826)	F2RL1 (ENSMICG00000032411)	F2R (ENSMICG00000029417)	IQGAP2 (ENSMICG00000007353)	F2RL2 (ENSMICG00000036441)	SV2C (ENSMICG00000007347)	ENSMICG00000044813	ENSMICG00000006494	ANKDD1B (ENSMICG00000031448)	POLK (ENSMICG00000000006)	CERT1 (ENSMICG00000028951)
Bushbaby	MODERN SPECIES	132	THBS4 (ENSOGAG00000015172)	MTX3 (ENSOGAG00000012479)	CMYA5 (ENSOGAG00000012460)	TENT2 (ENSOGAG00000012456)	HOMER1 (ENSOGAG00000012453)	JMY (ENSOGAG00000002137) #7	BHMT (ENSOGAG00000006820) #8	BHMT2 (ENSOGAG00000008629) #9	DMGDH (ENSOGAG00000008622) #10	ARSB (ENSOGAG00000008620) #11	LHFPL2 (ENSOGAG00000024907) #13	SCAMP1 (ENSOGAG00000014059) #14	AP3B1 (ENSOGAG00000002145) #17	ENSOGAG00000026363	TBCA (ENSOGAG00000010198) #21	OTP (ENSOGAG00000010197) #22	WDR41 (ENSOGAG00000006937)	PDE8B (ENSOGAG00000006930)	ZBED3 (ENSOGAG00000033172)	AGGF1 (ENSOGAG00000003439)	CRHBP (ENSOGAG00000003437)	S100Z (ENSOGAG00000027239)	F2RL1 (ENSOGAG00000001151)	F2R (ENSOGAG00000013594)	F2RL2 (ENSOGAG00000030469)	IQGAP2 (ENSOGAG00000013579)	ENSOGAG00000012074	SV2C (ENSOGAG00000013571)	POC5 (ENSOGAG00000016674)	ANKDD1B (ENSOGAG00000007012)	POLK (ENSOGAG00000007007)
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT01050000246247	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT01050000246247	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00390000007084.c.a.d.d	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT01050000246247	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00900000143509	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00940000164545	ENSGT00940000165612
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00390000007084.c.a.d.d	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT01050000246247	ENSGT00390000009710.p.b #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00900000143509	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00940000164545	ENSGT00940000165612
Hominidae	ANCESTRAL SPECIES	7	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00390000007084.c.a.d.d	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT01050000246247	ENSGT00390000009710.p.b #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00940000164545	ENSGT00940000165612	ENSGT00390000004454
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00390000007084.c.a.d.d	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710.p.b #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00900000143509	ENSGT00940000154938.f.b	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00940000164545.a
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00390000007084.c.a.d.d	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710.p.b #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00900000143509	ENSGT00940000154938.f.b	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164545.a	ENSGT00940000165612
Pan	ANCESTRAL SPECIES	21	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00390000007084.c.a.d.d	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710.p.b #21	ENSGT00940000159952 #22	ENSGT00950000182878.b.a.c.a.a.b.i.b	ENSGT00390000017026	ENSGT00940000157817	ENSGT00900000143509	ENSGT00940000154938.f.b	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164545.a
Bonobo	MODERN SPECIES	18	THBS4 (ENSPPAG00000034900)	MTX3 (ENSPPAG00000041435)	CMYA5 (ENSPPAG00000036589)	TENT2 (ENSPPAG00000035817)	HOMER1 (ENSPPAG00000032101)	ENSPPAG00000017260	JMY (ENSPPAG00000037761) #7	BHMT (ENSPPAG00000035095) #8	DMGDH (ENSPPAG00000022080) #10	ARSB (ENSPPAG00000040516) #11	LHFPL2 (ENSPPAG00000036923) #13	SCAMP1 (ENSPPAG00000037862) #14	AP3B1 (ENSPPAG00000038854) #17	ENSPPAG00000044127	TBCA (ENSPPAG00000037014) #21	OTP (ENSPPAG00000042915) #22	WDR41 (ENSPPAG00000036126)	ENSPPAG00000035224	PDE8B (ENSPPAG00000037153)	ENSPPAG00000042326	ENSPPAG00000015926	AGGF1 (ENSPPAG00000035969)	CRHBP (ENSPPAG00000041280)	S100Z (ENSPPAG00000038063)	F2RL1 (ENSPPAG00000023823)	F2R (ENSPPAG00000034950)	IQGAP2 (ENSPPAG00000029477)	F2RL2 (ENSPPAG00000036549)	SV2C (ENSPPAG00000042256)	ENSPPAG00000038410	ENSPPAG00000035826
Chimpanzee	MODERN SPECIES	18	MTX3 (ENSPTRG00000051488)	ENSPTRG00000039087	CMYA5 (ENSPTRG00000023686)	TENT2 (ENSPTRG00000017028)	HOMER1 (ENSPTRG00000017026)	ENSPTRG00000048128	JMY (ENSPTRG00000017025) #7	ENSPTRG00000043319	BHMT2 (ENSPTRG00000017022) #8	DMGDH (ENSPTRG00000017020) #10	ARSB (ENSPTRG00000017019) #11	LHFPL2 (ENSPTRG00000045309) #13	SCAMP1 (ENSPTRG00000047664) #14	AP3B1 (ENSPTRG00000017015) #17	TBCA (ENSPTRG00000017013) #21	OTP (ENSPTRG00000017012) #22	ENSPTRG00000023613	WDR41 (ENSPTRG00000017011)	PDE8B (ENSPTRG00000017010)	ENSPTRG00000042930	ENSPTRG00000046179	ZBED3 (ENSPTRG00000050050)	AGGF1 (ENSPTRG00000017008)	CRHBP (ENSPTRG00000017007)	S100Z (ENSPTRG00000017006)	F2RL1 (ENSPTRG00000017005)	F2R (ENSPTRG00000017004)	IQGAP2 (ENSPTRG00000017002)	F2RL2 (ENSPTRG00000017003)	ENSPTRG00000046035	SV2C (ENSPTRG00000017000)
Human	MODERN SPECIES	17	SERINC5 (ENSG00000164300)	THBS4 (ENSG00000113296)	MTX3 (ENSG00000177034)	CMYA5 (ENSG00000164309)	TENT2 (ENSG00000164329)	HOMER1 (ENSG00000152413)	JMY (ENSG00000152409) #7	BHMT (ENSG00000145692) #8	BHMT2 (ENSG00000132840) #9	DMGDH (ENSG00000132837) #10	ARSB (ENSG00000113273) #11	LHFPL2 (ENSG00000145685) #13	SCAMP1 (ENSG00000085365) #14	AP3B1 (ENSG00000132842) #17	TBCA (ENSG00000171530) #21	OTP (ENSG00000171540) #22	WDR41 (ENSG00000164253)	PDE8B (ENSG00000113231)	ENSG00000284762	ZBED3 (ENSG00000132846)	AGGF1 (ENSG00000164252)	CRHBP (ENSG00000145708)	S100Z (ENSG00000171643)	F2RL1 (ENSG00000164251)	F2R (ENSG00000181104)	F2RL2 (ENSG00000164220)	IQGAP2 (ENSG00000145703)	SV2C (ENSG00000122012)	POC5 (ENSG00000152359)	ANKDD1B (ENSG00000189045)	POLK (ENSG00000122008)
Gorilla	MODERN SPECIES	8	MTX3 (ENSGGOG00000003916)	CMYA5 (ENSGGOG00000006288)	TENT2 (ENSGGOG00000023154)	HOMER1 (ENSGGOG00000000986)	ENSGGOG00000043244	JMY (ENSGGOG00000008560) #7	BHMT (ENSGGOG00000007558) #8	BHMT2 (ENSGGOG00000003210) #9	DMGDH (ENSGGOG00000003203) #10	ARSB (ENSGGOG00000010450) #11	LHFPL2 (ENSGGOG00000003771) #13	SCAMP1 (ENSGGOG00000015191) #14	AP3B1 (ENSGGOG00000001771) #17	ENSGGOG00000027597	ENSGGOG00000023547 #21	OTP (ENSGGOG00000015687) #22	ENSGGOG00000027406	WDR41 (ENSGGOG00000026798)	PDE8B (ENSGGOG00000005317)	ENSGGOG00000039702	ENSGGOG00000037102	ZBED3 (ENSGGOG00000002896)	AGGF1 (ENSGGOG00000010269)	CRHBP (ENSGGOG00000011139)	S100Z (ENSGGOG00000025895)	F2RL1 (ENSGGOG00000007078)	F2R (ENSGGOG00000010442)	IQGAP2 (ENSGGOG00000014696)	F2RL2 (ENSGGOG00000011789)	SV2C (ENSGGOG00000007723)	ENSGGOG00000039209
Orangutan	MODERN SPECIES	18	MTX3 (ENSPPYG00000015592)	CMYA5 (ENSPPYG00000015591)	TENT2 (ENSPPYG00000015590)	ENSPPYG00000011137	HOMER1 (ENSPPYG00000015589)	JMY (ENSPPYG00000015588) #7	BHMT (ENSPPYG00000015586) #8	BHMT2 (ENSPPYG00000015585) #9	DMGDH (ENSPPYG00000015584) #10	ARSB (ENSPPYG00000015583) #11	LHFPL2 (ENSPPYG00000015582) #13	SCAMP1 (ENSPPYG00000015581) #14	AP3B1 (ENSPPYG00000015580) #17	ENSPPYG00000040806	TBCA (ENSPPYG00000015579) #21	OTP (ENSPPYG00000015578) #22	WDR41 (ENSPPYG00000015577)	ENSPPYG00000030861	PDE8B (ENSPPYG00000015576)	ZBED3 (ENSPPYG00000015575)	AGGF1 (ENSPPYG00000015574)	CRHBP (ENSPPYG00000015573)	S100Z (ENSPPYG00000015572)	F2RL1 (ENSPPYG00000041489)	F2R (ENSPPYG00000015570)	F2RL2 (ENSPPYG00000015569)	IQGAP2 (ENSPPYG00000015568)	SV2C (ENSPPYG00000015566)	ENSPPYG00000015565	POC5 (ENSPPYG00000015564)	ANKDD1B (ENSPPYG00000015563)
Gibbon	MODERN SPECIES	11	ENSNLEG00000012915	CMYA5 (ENSNLEG00000012895)	TENT2 (ENSNLEG00000027224)	HOMER1 (ENSNLEG00000012860)	JMY (ENSNLEG00000012852) #7	BHMT (ENSNLEG00000012840) #8	BHMT2 (ENSNLEG00000012819) #9	DMGDH (ENSNLEG00000012801) #10	ARSB (ENSNLEG00000012786) #11	ENSNLEG00000018637	LHFPL2 (ENSNLEG00000035509) #13	SCAMP1 (ENSNLEG00000029924) #14	AP3B1 (ENSNLEG00000012740) #17	ENSNLEG00000012739	TBCA (ENSNLEG00000012734) #21	OTP (ENSNLEG00000012728) #22	WDR41 (ENSNLEG00000012712)	ENSNLEG00000028936	PDE8B (ENSNLEG00000012655)	AGGF1 (ENSNLEG00000026907)	CRHBP (ENSNLEG00000012627)	S100Z (ENSNLEG00000012623)	ENSNLEG00000031332	F2RL1 (ENSNLEG00000012622)	F2R (ENSNLEG00000012619)	F2RL2 (ENSNLEG00000012616)	IQGAP2 (ENSNLEG00000012573)	GDE1 (ENSNLEG00000012560)	CCP110 (ENSNLEG00000012522)	VPS35L (ENSNLEG00000012499)	KNOP1 (ENSNLEG00000012496)
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00940000159696	ENSGT00940000156640	ENSGT00390000007084.c.a.d.d	ENSGT00940000156354	ENSGT00390000006721.j	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT01050000246247	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00900000143509	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT01050000244840.A.a.a	ENSGT01050000246082	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00940000164545	ENSGT00940000165612	ENSGT00390000004454
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00940000159696	ENSGT00940000156640	ENSGT00390000007084.c.a.d.d	ENSGT00940000156354	ENSGT00390000006721.j	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT01050000246247	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00900000143509	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT01050000244840.A.a.a	ENSGT01050000246082	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00940000164545	ENSGT00940000165612	ENSGT00390000004454
Vervet Monkey	MODERN SPECIES	23	CMYA5 (ENSCSAG00000015197)	ENSCSAG00000015214	TENT2 (ENSCSAG00000015221)	ENSCSAG00000019419	HOMER1 (ENSCSAG00000015226)	JMY (ENSCSAG00000015236) #7	BHMT (ENSCSAG00000015241) #8	BHMT2 (ENSCSAG00000015246) #9	DMGDH (ENSCSAG00000015255) #10	ARSB (ENSCSAG00000015262) #11	LHFPL2 (ENSCSAG00000015267) #13	ENSCSAG00000019418	SCAMP1 (ENSCSAG00000015275) #14	AP3B1 (ENSCSAG00000015290) #17	ENSCSAG00000015299	OTP (ENSCSAG00000015302) #22	WDR41 (ENSCSAG00000015310)	PDE8B (ENSCSAG00000015317)	ZBED3 (ENSCSAG00000019417)	AGGF1 (ENSCSAG00000015324)	ENSCSAG00000015331	CRHBP (ENSCSAG00000015337)	F2RL1 (ENSCSAG00000015342)	F2R (ENSCSAG00000015345)	F2RL2 (ENSCSAG00000015353)	IQGAP2 (ENSCSAG00000015367)	SV2C (ENSCSAG00000015376)	POC5 (ENSCSAG00000015388)	POLK (ENSCSAG00000015397)	CERT1 (ENSCSAG00000015407)	HMGCR (ENSCSAG00000015420)
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00390000006721.j	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710.k.a #21	ENSGT01050000246247	ENSGT00390000009710.l #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00900000143509	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT01050000244840.A.a.a	ENSGT01050000246082	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00940000164545	ENSGT00940000165612
Macaca	ANCESTRAL SPECIES	7	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00390000006721.j	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710.k.a #21	ENSGT01050000246247	ENSGT00390000009710.l #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00900000143509	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT01050000244840.A.a.a	ENSGT01050000246082	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00730000110997.k.b.a	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00390000005569.x.a.b.b.a.a
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000161627.a.a.a.a.a.a.a.b	ENSGT00940000157603 #17	ENSGT00390000009710.k.a #21	ENSGT01050000246247	ENSGT00390000009710.l #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00900000143509	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT01050000245467.b.a.b	ENSGT00730000110997.k.b.a	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A
Crab-eating macaque	MODERN SPECIES	16	CMYA5 (ENSMFAG00000000649)	TENT2 (ENSMFAG00000039561)	HOMER1 (ENSMFAG00000001337)	ENSMFAG00000032864	JMY (ENSMFAG00000044839) #7	ENSMFAG00000047248	BHMT (ENSMFAG00000030260) #8	DMGDH (ENSMFAG00000024245) #10	ARSB (ENSMFAG00000038907) #11	LHFPL2 (ENSMFAG00000036894) #13	SCAMP1 (ENSMFAG00000037897) #14	ENSMFAG00000056484	AP3B1 (ENSMFAG00000040032) #17	ENSMFAG00000057074	TBCA (ENSMFAG00000034059) #21	OTP (ENSMFAG00000056050) #22	WDR41 (ENSMFAG00000002206)	ENSMFAG00000040282	PDE8B (ENSMFAG00000041903)	ENSMFAG00000063877	ZBED3 (ENSMFAG00000065084)	AGGF1 (ENSMFAG00000038062)	CRHBP (ENSMFAG00000041775)	F2RL1 (ENSMFAG00000037697)	F2R (ENSMFAG00000044734)	F2RL2 (ENSMFAG00000045908)	ENSMFAG00000059937	IQGAP2 (ENSMFAG00000032362)	ENSMFAG00000048479	ENSMFAG00000000588	SV2C (ENSMFAG00000036123)
Rhesus	MODERN SPECIES	16	CMYA5 (ENSMMUG00000020733)	TENT2 (ENSMMUG00000020731)	HOMER1 (ENSMMUG00000017057)	ENSMMUG00000054810	ENSMMUG00000060083	ENSMMUG00000029973	JMY (ENSMMUG00000046325) #7	BHMT2 (ENSMMUG00000006796) #8	DMGDH (ENSMMUG00000006795) #10	ARSB (ENSMMUG00000006792) #11	LHFPL2 (ENSMMUG00000016402) #13	SCAMP1 (ENSMMUG00000039925) #14	ENSMMUG00000057268	AP3B1 (ENSMMUG00000001360) #17	ENSMMUG00000053817 #21	OTP (ENSMMUG00000039760) #22	WDR41 (ENSMMUG00000021361)	ZBED3 (ENSMMUG00000021357)	AGGF1 (ENSMMUG00000021358)	CRHBP (ENSMMUG00000021354)	ENSMMUG00000050110	F2RL1 (ENSMMUG00000060389)	F2R (ENSMMUG00000039522)	F2RL2 (ENSMMUG00000022988)	IQGAP2 (ENSMMUG00000022982)	ENSMMUG00000049361	SV2C (ENSMMUG00000019887)	POC5 (ENSMMUG00000006146)	ANKDD1B (ENSMMUG00000061069)	POLK (ENSMMUG00000006144)	CERT1 (ENSMMUG00000006141)
Pig-tailed macaque	MODERN SPECIES	533	MTX3 (ENSMNEG00000008284)	CMYA5 (ENSMNEG00000037356)	TENT2 (ENSMNEG00000039295)	HOMER1 (ENSMNEG00000013996)	ENSMNEG00000037635	JMY (ENSMNEG00000043109) #7	BHMT2 (ENSMNEG00000036544) #9	DMGDH (ENSMNEG00000026178) #10	ARSB (ENSMNEG00000045377) #11	LHFPL2 (ENSMNEG00000031372) #13	SCAMP1 (ENSMNEG00000028211) #14	AP3B1 (ENSMNEG00000043246) #17	ENSMNEG00000041744	ENSMNEG00000004983	ENSMNEG00000044207 #21	OTP (ENSMNEG00000033198) #22	WDR41 (ENSMNEG00000020110)	PDE8B (ENSMNEG00000045435)	ENSMNEG00000042545	ENSMNEG00000036640	AGGF1 (ENSMNEG00000044235)	CRHBP (ENSMNEG00000039318)	F2RL1 (ENSMNEG00000038661)	F2R (ENSMNEG00000039945)	ENSMNEG00000036523	IQGAP2 (ENSMNEG00000039584)	F2RL2 (ENSMNEG00000028529)	SV2C (ENSMNEG00000043938)	ENSMNEG00000035234	ENSMNEG00000039274	ENSMNEG00000029783
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT01050000246247	ENSGT00390000009710.l #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT01050000244840.A.a.a	ENSGT01050000246082	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00940000164545	ENSGT00940000165612	ENSGT00390000004454
Olive baboon	MODERN SPECIES	15	THBS4 (ENSPANG00000001778)	MTX3 (ENSPANG00000017204)	CMYA5 (ENSPANG00000006609)	TENT2 (ENSPANG00000017932)	HOMER1 (ENSPANG00000029433)	ENSPANG00000042329	JMY (ENSPANG00000008952) #7	BHMT (ENSPANG00000010787) #8	DMGDH (ENSPANG00000016060) #10	ARSB (ENSPANG00000023320) #11	LHFPL2 (ENSPANG00000006610) #13	SCAMP1 (ENSPANG00000004375) #14	ENSPANG00000050549	AP3B1 (ENSPANG00000023495) #17	TBCA (ENSPANG00000021931) #21	OTP (ENSPANG00000009550) #22	WDR41 (ENSPANG00000011629)	PDE8B (ENSPANG00000025090)	ZBED3 (ENSPANG00000038596)	AGGF1 (ENSPANG00000026423)	CRHBP (ENSPANG00000010788)	F2RL1 (ENSPANG00000003861)	ENSPANG00000037268	F2R (ENSPANG00000013598)	F2RL2 (ENSPANG00000011810)	ENSPANG00000037698	IQGAP2 (ENSPANG00000004269)	ENSPANG00000018228	ENSPANG00000044335	SV2C (ENSPANG00000014041)	ENSPANG00000044389
Cercopithecinae_d	ANCESTRAL SPECIES	48	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT01050000246247	ENSGT00390000009710.l #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00900000143509	ENSGT00730000111121	ENSGT00390000001362	ENSGT01050000244840.A.a.a	ENSGT01050000246082	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00940000164545	ENSGT00940000165612	ENSGT00390000004454
Sooty mangabey	MODERN SPECIES	296	MTX3 (ENSCATG00000043566)	CMYA5 (ENSCATG00000030915)	TENT2 (ENSCATG00000038522)	HOMER1 (ENSCATG00000041074)	JMY (ENSCATG00000031558) #7	ENSCATG00000017079	BHMT (ENSCATG00000018459) #8	BHMT2 (ENSCATG00000041810) #9	DMGDH (ENSCATG00000043134) #10	ARSB (ENSCATG00000016836) #11	LHFPL2 (ENSCATG00000035958) #13	SCAMP1 (ENSCATG00000044496) #14	AP3B1 (ENSCATG00000038017) #17	ENSCATG00000017219	ENSCATG00000034024 #21	OTP (ENSCATG00000032638) #22	WDR41 (ENSCATG00000041825)	PDE8B (ENSCATG00000037786)	ENSCATG00000030461	AGGF1 (ENSCATG00000041518)	CRHBP (ENSCATG00000033058)	F2RL1 (ENSCATG00000032504)	F2R (ENSCATG00000004708)	ENSCATG00000044545	IQGAP2 (ENSCATG00000029179)	F2RL2 (ENSCATG00000035572)	SV2C (ENSCATG00000036443)	ENSCATG00000039111	ENSCATG00000004582	ENSCATG00000038048	ENSCATG00000033028
Drill	MODERN SPECIES	197													AP3B1 (ENSMLEG00000031960) #17	ENSMLEG00000025761	TBCA (ENSMLEG00000021010) #21	OTP (ENSMLEG00000035311) #22	WDR41 (ENSMLEG00000039709)	PDE8B (ENSMLEG00000040085)	ENSMLEG00000040040	AGGF1 (ENSMLEG00000031926)	CRHBP (ENSMLEG00000033854)	F2RL1 (ENSMLEG00000032188)	F2R (ENSMLEG00000034077)	ENSMLEG00000032992	ENSMLEG00000019477	IQGAP2 (ENSMLEG00000027862)	F2RL2 (ENSMLEG00000021660)	ENSMLEG00000040224	SV2C (ENSMLEG00000000294)	ENSMLEG00000040235	ENSMLEG00000039763
Rhinopithecus	ANCESTRAL SPECIES	682															ENSGT00940000170540	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00900000143509	ENSGT00940000157817
Golden snub-nosed monkey	MODERN SPECIES	3114												ENSRROG00000036497	ENSRROG00000032349	AP3B1 (ENSRROG00000033567) #17	ENSRROG00000040410 #21	OTP (ENSRROG00000020103) #22	WDR41 (ENSRROG00000001190)	ENSRROG00000040707	PDE8B (ENSRROG00000030744)
Black snub-nosed monkey	MODERN SPECIES	1233												SCAMP1 (ENSRBIG00000044414) #14	AP3B1 (ENSRBIG00000011326) #17	ENSRBIG00000028738	ENSRBIG00000032198	OTP (ENSRBIG00000039044) #22	WDR41 (ENSRBIG00000040810)	PDE8B (ENSRBIG00000021650)	ENSRBIG00000034419
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000156300.d.k.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710.i.b #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00940000174521	ENSGT00950000182940.b.b	ENSGT00390000015047.d.a	ENSGT00390000004454	ENSGT00940000154170.A
Cebidae	ANCESTRAL SPECIES	6	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000156300.d.k.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710.i.b #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00940000174521	ENSGT00950000182940.b.b	ENSGT00390000015047.d.a	ENSGT00390000004454	ENSGT00940000154170.A
Cebidae_a	ANCESTRAL SPECIES	3	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000156300.d.k.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710.i.b #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00900000143509	ENSGT00730000111121	ENSGT00390000001362	ENSGT00510000047029.z.e	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00940000174521	ENSGT00950000182940.b.b	ENSGT00390000015047.d.a	ENSGT00390000004454
Capuchin	MODERN SPECIES	50				JMY (ENSCCAG00000020292) #7	BHMT (ENSCCAG00000001311) #8	BHMT2 (ENSCCAG00000025343) #9	ENSCCAG00000025862	DMGDH (ENSCCAG00000029570) #10	ARSB (ENSCCAG00000026253) #11	LHFPL2 (ENSCCAG00000034151) #13	SCAMP1 (ENSCCAG00000020394) #14	ENSCCAG00000001996	AP3B1 (ENSCCAG00000024221) #17	ENSCCAG00000036687	TBCA (ENSCCAG00000034960) #21	OTP (ENSCCAG00000028580) #22	ENSCCAG00000033428	ENSCCAG00000024360	PDE8B (ENSCCAG00000035315)	AGGF1 (ENSCCAG00000023174)	CRHBP (ENSCCAG00000017626)	ENSCCAG00000027406	S100Z (ENSCCAG00000021575)	F2RL1 (ENSCCAG00000020451)	F2R (ENSCCAG00000035401)	F2RL2 (ENSCCAG00000023100)	IQGAP2 (ENSCCAG00000032875)	SV2C (ENSCCAG00000036246)	ENSCCAG00000030179	POC5 (ENSCCAG00000013495)	ANKDD1B (ENSCCAG00000020279)
Bolivian squirrel monkey	MODERN SPECIES	43	MTX3 (ENSSBOG00000030765)	CMYA5 (ENSSBOG00000035707)	TENT2 (ENSSBOG00000025595)	HOMER1 (ENSSBOG00000030696)	ENSSBOG00000022728	JMY (ENSSBOG00000001249) #7	BHMT (ENSSBOG00000030724) #8	DMGDH (ENSSBOG00000035140) #10	ENSSBOG00000011617	ARSB (ENSSBOG00000031483) #11	LHFPL2 (ENSSBOG00000033083) #13	SCAMP1 (ENSSBOG00000029488) #14	ENSSBOG00000034436	AP3B1 (ENSSBOG00000029511) #17	TBCA (ENSSBOG00000031001) #21	OTP (ENSSBOG00000035833) #22	ENSSBOG00000021924	WDR41 (ENSSBOG00000019142)	PDE8B (ENSSBOG00000020456)	ENSSBOG00000032840	AGGF1 (ENSSBOG00000019539)	CRHBP (ENSSBOG00000024077)	ENSSBOG00000013156	S100Z (ENSSBOG00000016013)	F2RL1 (ENSSBOG00000028683)	ENSSBOG00000027642	F2R (ENSSBOG00000033584)	IQGAP2 (ENSSBOG00000020078)	F2RL2 (ENSSBOG00000026294)	ENSSBOG00000032555	SV2C (ENSSBOG00000034394)
Marmoset	MODERN SPECIES	11	ENSCJAG00000079194	ENSCJAG00000084621	ENSCJAG00000080099	BHMT (ENSCJAG00000059013) #8	BHMT2 (ENSCJAG00000019766) #9	DMGDH (ENSCJAG00000019768) #10	ENSCJAG00000081984	LHFPL2 (ENSCJAG00000085814) #13	SCAMP1 (ENSCJAG00000019794) #14	AP3B1 (ENSCJAG00000019804) #17	ENSCJAG00000085539	ENSCJAG00000071117	ENSCJAG00000019848 #21	ENSCJAG00000072122	ENSCJAG00000085518	OTP (ENSCJAG00000071567) #22	WDR41 (ENSCJAG00000019853)	PDE8B (ENSCJAG00000019876)	ZBED3 (ENSCJAG00000019950)	AGGF1 (ENSCJAG00000019955)	ENSCJAG00000070903	CRHBP (ENSCJAG00000019970)	S100Z (ENSCJAG00000081437)	F2RL1 (ENSCJAG00000062182)	ENSCJAG00000084566	F2R (ENSCJAG00000086495)	IQGAP2 (ENSCJAG00000019985)	F2RL2 (ENSCJAG00000020029)	SV2C (ENSCJAG00000020031)	POC5 (ENSCJAG00000017148)	ENSCJAG00000071025
Mas night monkey	MODERN SPECIES	670	CMYA5 (ENSANAG00000027112)	TENT2 (ENSANAG00000023910)	HOMER1 (ENSANAG00000035206)	ENSANAG00000032876	JMY (ENSANAG00000022714) #7	ENSANAG00000019851	BHMT (ENSANAG00000023575) #8	DMGDH (ENSANAG00000019881) #10	ENSANAG00000019436	ARSB (ENSANAG00000028965) #11	LHFPL2 (ENSANAG00000021404) #13	SCAMP1 (ENSANAG00000023081) #14	ENSANAG00000036326	AP3B1 (ENSANAG00000035703) #17	ENSANAG00000035527 #21	OTP (ENSANAG00000029433) #22	WDR41 (ENSANAG00000004152)	PDE8B (ENSANAG00000031594)	AGGF1 (ENSANAG00000023021)	CRHBP (ENSANAG00000022343)	ENSANAG00000028007	S100Z (ENSANAG00000027821)	F2RL1 (ENSANAG00000021399)	F2R (ENSANAG00000020328)	F2RL2 (ENSANAG00000019493)	IQGAP2 (ENSANAG00000027336)	ENSANAG00000023009	SV2C (ENSANAG00000020779)	POC5 (ENSANAG00000033971)	POLK (ENSANAG00000033747)	CERT1 (ENSANAG00000035049)
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00940000170540	ENSGT01050000246247	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00940000170540	ENSGT01050000246247	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT01050000246247	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Suina	ANCESTRAL SPECIES	11	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT01050000246247	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026.f	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Chacoan peccary	MODERN SPECIES	204	SERINC5 (ENSCWAG00000012870)	THBS4 (ENSCWAG00000012471)	MTX3 (ENSCWAG00000012419)	CMYA5 (ENSCWAG00000011677)	TENT2 (ENSCWAG00000011540)	HOMER1 (ENSCWAG00000011069)	JMY (ENSCWAG00000010992) #7	BHMT (ENSCWAG00000010882) #8	BHMT2 (ENSCWAG00000010749) #9	DMGDH (ENSCWAG00000010632) #10	ARSB (ENSCWAG00000010599) #11	LHFPL2 (ENSCWAG00000010566) #13	SCAMP1 (ENSCWAG00000010485) #14	AP3B1 (ENSCWAG00000010356) #17	TBCA (ENSCWAG00000010250) #21	OTP (ENSCWAG00000010193) #22	WDR41 (ENSCWAG00000010043)	PDE8B (ENSCWAG00000008441)	ZBED3 (ENSCWAG00000008305)	AGGF1 (ENSCWAG00000008243)	CRHBP (ENSCWAG00000008117)	ENSCWAG00000008077	F2RL1 (ENSCWAG00000008039)	F2R (ENSCWAG00000008004)	F2RL2 (ENSCWAG00000007970)	IQGAP2 (ENSCWAG00000003644)	SV2C (ENSCWAG00000003605)	POC5 (ENSCWAG00000003563)	ANKDD1B (ENSCWAG00000003540)	POLK (ENSCWAG00000003477)	CERT1 (ENSCWAG00000003403)
Pig	MODERN SPECIES	10	CMYA5 (ENSSSCG00000026098)	TENT2 (ENSSSCG00000014114)	ENSSSCG00000043942	HOMER1 (ENSSSCG00000014113)	JMY (ENSSSCG00000014112) #7	BHMT (ENSSSCG00000014108) #8	ENSSSCG00000053764	BHMT2 (ENSSSCG00000054426) #9	DMGDH (ENSSSCG00000014110) #10	ARSB (ENSSSCG00000038535) #11	LHFPL2 (ENSSSCG00000028536) #13	SCAMP1 (ENSSSCG00000034795) #14	AP3B1 (ENSSSCG00000014101) #17	ENSSSCG00000034241	TBCA (ENSSSCG00000014100) #21	OTP (ENSSSCG00000014099) #22	ENSSSCG00000014098	ENSSSCG00000051837	ENSSSCG00000014096	PDE8B (ENSSSCG00000014097)	ENSSSCG00000050058	AGGF1 (ENSSSCG00000014094)	CRHBP (ENSSSCG00000014093)	S100Z (ENSSSCG00000014092)	F2RL1 (ENSSSCG00000014091)	F2R (ENSSSCG00000035355)	F2RL2 (ENSSSCG00000037582)	ENSSSCG00000045040	IQGAP2 (ENSSSCG00000014088)	SV2C (ENSSSCG00000034062)	POC5 (ENSSSCG00000014084)
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Camelidae	ANCESTRAL SPECIES	1	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Arabian camel	MODERN SPECIES	22	SERINC5 (ENSCDRG00005018540)	THBS4 (ENSCDRG00005018591)	MTX3 (ENSCDRG00005018661)	CMYA5 (ENSCDRG00005018749)	TENT2 (ENSCDRG00005018837)	HOMER1 (ENSCDRG00005018978)	JMY (ENSCDRG00005019085) #7	BHMT (ENSCDRG00005019118) #8	BHMT2 (ENSCDRG00005000037) #9	DMGDH (ENSCDRG00005000085) #10	ARSB (ENSCDRG00005000234) #11	LHFPL2 (ENSCDRG00005000275) #13	SCAMP1 (ENSCDRG00005000299) #14	AP3B1 (ENSCDRG00005000366) #17	TBCA (ENSCDRG00005000444) #21	OTP (ENSCDRG00005000470) #22	WDR41 (ENSCDRG00005000509)	PDE8B (ENSCDRG00005000565)	ZBED3 (ENSCDRG00005000608)	AGGF1 (ENSCDRG00005000618)	CRHBP (ENSCDRG00005000645)	ENSCDRG00005000661	S100Z (ENSCDRG00005000678)	F2RL1 (ENSCDRG00005000688)	F2R (ENSCDRG00005000707)	IQGAP2 (ENSCDRG00005000766)	F2RL2 (ENSCDRG00005001095)	SV2C (ENSCDRG00005001113)	POC5 (ENSCDRG00005001127)	ANKDD1B (ENSCDRG00005001160)	POLK (ENSCDRG00005001206)
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Cetacea	ANCESTRAL SPECIES	1	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Blue whale	MODERN SPECIES	14	THBS4 (ENSBMSG00010006679)	MTX3 (ENSBMSG00010006662)	CMYA5 (ENSBMSG00010006643)	ENSBMSG00010006619	HOMER1 (ENSBMSG00010006587)	JMY (ENSBMSG00010006531) #7	BHMT (ENSBMSG00010006489) #8	BHMT2 (ENSBMSG00010006453) #9	DMGDH (ENSBMSG00010006427) #10	ARSB (ENSBMSG00010006407) #11	LHFPL2 (ENSBMSG00010006395) #13	SCAMP1 (ENSBMSG00010006378) #14	AP3B1 (ENSBMSG00010006360) #17	ENSBMSG00010006352	ENSBMSG00010006335 #21	OTP (ENSBMSG00010006319) #22	WDR41 (ENSBMSG00010006297)	PDE8B (ENSBMSG00010005858)	ZBED3 (ENSBMSG00010005760)	AGGF1 (ENSBMSG00010005734)	CRHBP (ENSBMSG00010005714)	S100Z (ENSBMSG00010005711)	F2RL1 (ENSBMSG00010005699)	F2R (ENSBMSG00010005694)	F2RL2 (ENSBMSG00010005686)	IQGAP2 (ENSBMSG00010005591)	ENSBMSG00010005549	SV2C (ENSBMSG00010005531)	POC5 (ENSBMSG00010005501)	POLK (ENSBMSG00010005438)	CERT1 (ENSBMSG00010004912)
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00550000074840.y.a.c	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Sperm whale	MODERN SPECIES	19	SERINC5 (ENSPCTG00005004085)	THBS4 (ENSPCTG00005004054)	MTX3 (ENSPCTG00005004032)	CMYA5 (ENSPCTG00005004013)	ENSPCTG00005003995	TENT2 (ENSPCTG00005003973)	HOMER1 (ENSPCTG00005003925)	JMY (ENSPCTG00005003899) #7	BHMT (ENSPCTG00005003876) #8	DMGDH (ENSPCTG00005003853) #10	ARSB (ENSPCTG00005003811) #11	LHFPL2 (ENSPCTG00005003792) #13	SCAMP1 (ENSPCTG00005003758) #14	AP3B1 (ENSPCTG00005003664) #17	TBCA (ENSPCTG00005003597) #21	OTP (ENSPCTG00005003577) #22	WDR41 (ENSPCTG00005003516)	PDE8B (ENSPCTG00005002983)	ZBED3 (ENSPCTG00005002866)	AGGF1 (ENSPCTG00005002832)	S100Z (ENSPCTG00005002807)	F2RL1 (ENSPCTG00005002799)	F2R (ENSPCTG00005002792)	ENSPCTG00005002778	F2RL2 (ENSPCTG00005002767)	IQGAP2 (ENSPCTG00005002535)	SV2C (ENSPCTG00005002439)	POC5 (ENSPCTG00005002372)	POLK (ENSPCTG00005002299)	COL4A3BP (ENSPCTG00005002102)	HMGCR (ENSPCTG00005002015)
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00550000074840.y.a.c	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667
Dolphin	MODERN SPECIES	3847																OTP (ENSTTRG00000002622) #22
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00550000074840.y.a.c	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00940000154586.g.b	ENSGT00390000004454	ENSGT00940000154170.A
Vaquita	MODERN SPECIES	14	THBS4 (ENSPSNG00000003786)	MTX3 (ENSPSNG00000003883)	CMYA5 (ENSPSNG00000003900)	TENT2 (ENSPSNG00000004010)	ENSPSNG00000004038	HOMER1 (ENSPSNG00000004084)	JMY (ENSPSNG00000004120) #7	BHMT (ENSPSNG00000004175) #8	BHMT2 (ENSPSNG00000004227) #9	DMGDH (ENSPSNG00000004287) #10	ARSB (ENSPSNG00000004356) #11	LHFPL2 (ENSPSNG00000004403) #13	SCAMP1 (ENSPSNG00000004447) #14	AP3B1 (ENSPSNG00000004553) #17	TBCA (ENSPSNG00000004666) #21	OTP (ENSPSNG00000004725) #22	WDR41 (ENSPSNG00000004776)	PDE8B (ENSPSNG00000005114)	ZBED3 (ENSPSNG00000005710)	AGGF1 (ENSPSNG00000005724)	CRHBP (ENSPSNG00000005773)	S100Z (ENSPSNG00000005821)	F2RL1 (ENSPSNG00000005843)	F2R (ENSPSNG00000005065)	IQGAP2 (ENSPSNG00000005144)	F2RL2 (ENSPSNG00000005286)	SV2C (ENSPSNG00000005309)	ENSPSNG00000005362	POC5 (ENSPSNG00000005438)	POLK (ENSPSNG00000005609)	CERT1 (ENSPSNG00000005809)
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00550000074840.y.a.c	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00940000154586.g.b	ENSGT00390000004454	ENSGT00940000154170.A
Narwhal	MODERN SPECIES	298	THBS4 (ENSMMNG00015008670)	MTX3 (ENSMMNG00015008650)	CMYA5 (ENSMMNG00015008628)	ENSMMNG00015008614	TENT2 (ENSMMNG00015008599)	HOMER1 (ENSMMNG00015008534)	JMY (ENSMMNG00015008440) #7	BHMT (ENSMMNG00015008415) #8	BHMT2 (ENSMMNG00015008393) #9	DMGDH (ENSMMNG00015008374) #10	ARSB (ENSMMNG00015008346) #11	LHFPL2 (ENSMMNG00015008328) #13	SCAMP1 (ENSMMNG00015008303) #14	AP3B1 (ENSMMNG00015008260) #17	TBCA (ENSMMNG00015008230) #21	OTP (ENSMMNG00015008215) #22	WDR41 (ENSMMNG00015008176)	PDE8B (ENSMMNG00015008112)	ZBED3 (ENSMMNG00015008041)	AGGF1 (ENSMMNG00015008009)	CRHBP (ENSMMNG00015007977)	S100Z (ENSMMNG00015007958)	F2RL1 (ENSMMNG00015007943)	F2R (ENSMMNG00015007933)	F2RL2 (ENSMMNG00015007923)	IQGAP2 (ENSMMNG00015007731)	ENSMMNG00015007640	SV2C (ENSMMNG00015007600)	POC5 (ENSMMNG00015007540)	ANKDD1B (ENSMMNG00015007467)	POLK (ENSMMNG00015007374)
Beluga whale	MODERN SPECIES	71	THBS4 (ENSDLEG00000013983)	MTX3 (ENSDLEG00000014026)	CMYA5 (ENSDLEG00000014094)	PAPD4 (ENSDLEG00000014384)	ENSDLEG00000014436	HOMER1 (ENSDLEG00000014455)	JMY (ENSDLEG00000014574) #7	BHMT (ENSDLEG00000014599) #8	BHMT2 (ENSDLEG00000014617) #9	DMGDH (ENSDLEG00000014641) #10	ARSB (ENSDLEG00000014686) #11	LHFPL2 (ENSDLEG00000014699) #13	SCAMP1 (ENSDLEG00000014708) #14	AP3B1 (ENSDLEG00000014741) #17	TBCA (ENSDLEG00000014906) #21	OTP (ENSDLEG00000014945) #22	WDR41 (ENSDLEG00000014960)	PDE8B (ENSDLEG00000015062)	ZBED3 (ENSDLEG00000007936)	AGGF1 (ENSDLEG00000007958)	CRHBP (ENSDLEG00000007986)	S100Z (ENSDLEG00000008008)	F2RL1 (ENSDLEG00000008016)	F2R (ENSDLEG00000008028)	IQGAP2 (ENSDLEG00000008039)	F2RL2 (ENSDLEG00000008080)	ENSDLEG00000008092	SV2C (ENSDLEG00000008107)	ENSDLEG00000008154	POC5 (ENSDLEG00000008196)	POLK (ENSDLEG00000008261)
Pecora	ANCESTRAL SPECIES	6	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640.g	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Yarkand deer	MODERN SPECIES	3	HOMER1 (ENSCHYG00000008754)	JMY (ENSCHYG00000008534) #7	BHMT (ENSCHYG00000008466) #8	ENSCHYG00000008402	BHMT2 (ENSCHYG00000008358) #9	ENSCHYG00000008336	DMGDH (ENSCHYG00000007878) #10	ENSCHYG00000007782	LHFPL2 (ENSCHYG00000007744) #13	SCAMP1 (ENSCHYG00000007687) #14	AP3B1 (ENSCHYG00000007402) #17	ENSCHYG00000007356	ENSCHYG00000007344	ENSCHYG00000007338	TBCA (ENSCHYG00000007320) #21	OTP (ENSCHYG00000007305) #22	WDR41 (ENSCHYG00000007090)	ENSCHYG00000007028	ENSCHYG00000006962	ENSCHYG00000006952	ENSCHYG00000006937	ZBED3 (ENSCHYG00000006906)	AGGF1 (ENSCHYG00000006866)	CRHBP (ENSCHYG00000006799)	S100Z (ENSCHYG00000006771)	F2RL1 (ENSCHYG00000006741)	ENSCHYG00000006719	F2R (ENSCHYG00000006697)	F2RL2 (ENSCHYG00000006675)	IQGAP2 (ENSCHYG00000006385)	SV2C (ENSCHYG00000006307)
Percora_a	ANCESTRAL SPECIES	8	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640.g	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Siberian musk deer	MODERN SPECIES	69						JMY (ENSMMSG00000018183) #7	BHMT (ENSMMSG00000018085) #8	BHMT2 (ENSMMSG00000017965) #9	DMGDH (ENSMMSG00000017858) #10	ARSB (ENSMMSG00000017759) #11	LHFPL2 (ENSMMSG00000017736) #13	SCAMP1 (ENSMMSG00000017674) #14	AP3B1 (ENSMMSG00000017470) #17	ENSMMSG00000017442	ENSMMSG00000017301	OTP (ENSMMSG00000017274) #22	WDR41 (ENSMMSG00000017180)	PDE8B (ENSMMSG00000015917)	ZBED3 (ENSMMSG00000015777)	AGGF1 (ENSMMSG00000015751)	ENSMMSG00000015737	CRHBP (ENSMMSG00000015697)	S100Z (ENSMMSG00000015687)	F2RL1 (ENSMMSG00000015677)	F2R (ENSMMSG00000015666)	F2RL2 (ENSMMSG00000015650)	IQGAP2 (ENSMMSG00000015431)	SV2C (ENSMMSG00000015327)	POC5 (ENSMMSG00000015294)	POLK (ENSMMSG00000015182)	CERT1 (ENSMMSG00000014921)
Bovidae	ANCESTRAL SPECIES	7	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640.g	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Caprinae	ANCESTRAL SPECIES	30	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640.g	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305
Rambouillet Sheep	MODERN SPECIES	23	THBS4 (ENSOARG00020004359)	MTX3 (ENSOARG00020004194)	CMYA5 (ENSOARG00020003611)	TENT2 (ENSOARG00020003488)	HOMER1 (ENSOARG00020003237)	JMY (ENSOARG00020003148) #7	BHMT (ENSOARG00020003124) #8	DMGDH (ENSOARG00020003036) #10	ARSB (ENSOARG00020002992) #11	LHFPL2 (ENSOARG00020024639) #13	ENSOARG00020024626	SCAMP1 (ENSOARG00020024609) #14	ENSOARG00020024603	AP3B1 (ENSOARG00020024527) #17	TBCA (ENSOARG00020024464) #21	OTP (ENSOARG00020024451) #22	WDR41 (ENSOARG00020024404)	ENSOARG00020024389	PDE8B (ENSOARG00020023251)	ZBED3 (ENSOARG00020023150)	AGGF1 (ENSOARG00020023108)	CRHBP (ENSOARG00020023047)	S100Z (ENSOARG00020023021)	F2RL1 (ENSOARG00020023002)	F2R (ENSOARG00020022990)	F2RL2 (ENSOARG00020022973)	IQGAP2 (ENSOARG00020021962)	SV2C (ENSOARG00020021763)	POC5 (ENSOARG00020021712)	POLK (ENSOARG00020021498)	CERT1 (ENSOARG00020020967)
Goat	MODERN SPECIES	1	THBS4 (ENSCHIG00000024483)	MTX3 (ENSCHIG00000023759)	CMYA5 (ENSCHIG00000026691)	TENT2 (ENSCHIG00000019701)	HOMER1 (ENSCHIG00000025789)	JMY (ENSCHIG00000010675) #7	BHMT (ENSCHIG00000009078) #8	BHMT2 (ENSCHIG00000027021) #9	DMGDH (ENSCHIG00000021924) #10	ARSB (ENSCHIG00000001349) #11	LHFPL2 (ENSCHIG00000014180) #13	SCAMP1 (ENSCHIG00000025008) #14	ENSCHIG00000026947	AP3B1 (ENSCHIG00000018755) #17	TBCA (ENSCHIG00000021233) #21	OTP (ENSCHIG00000018904) #22	WDR41 (ENSCHIG00000023139)	PDE8B (ENSCHIG00000023152)	ZBED3 (ENSCHIG00000004171)	AGGF1 (ENSCHIG00000012662)	CRHBP (ENSCHIG00000024251)	S100Z (ENSCHIG00000018486)	F2RL1 (ENSCHIG00000026366)	F2R (ENSCHIG00000022474)	IQGAP2 (ENSCHIG00000020854)	F2RL2 (ENSCHIG00000002096)	SV2C (ENSCHIG00000016655)	POC5 (ENSCHIG00000009080)	ENSCHIG00000008486	POLK (ENSCHIG00000008105)	CERT1 (ENSCHIG00000021950)
Bovinae	ANCESTRAL SPECIES	33	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640.g	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000001830.j	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667
Bos	ANCESTRAL SPECIES	31	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640.g	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000001830.i.a.a.b	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000156667	ENSGT00940000155123.b
Bos_a	ANCESTRAL SPECIES	26	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640.g	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000001830.i.a.a.b	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305	ENSGT00940000162618
Wild yak	MODERN SPECIES	297													ENSBMUG00000010637	ENSBMUG00000010660	TBCA (ENSBMUG00000010673) #21	OTP (ENSBMUG00000010682) #22	WDR41 (ENSBMUG00000010747)	PDE8B (ENSBMUG00000011054)	AGGF1 (ENSBMUG00000011125)	S100Z (ENSBMUG00000011148)	F2RL1 (ENSBMUG00000011152)	F2R (ENSBMUG00000011164)	IQGAP2 (ENSBMUG00000011350)	F2RL2 (ENSBMUG00000011445)	ENSBMUG00000011462	SV2C (ENSBMUG00000011496)	POC5 (ENSBMUG00000011568)	POLK (ENSBMUG00000011634)	CERT1 (ENSBMUG00000011873)	HMGCR (ENSBMUG00000012171)	ANKRD31 (ENSBMUG00000012237)
Domestic yak	MODERN SPECIES	2	MTX3 (ENSBGRG00000005019)	CMYA5 (ENSBGRG00000005128)	TENT2 (ENSBGRG00000005235)	HOMER1 (ENSBGRG00000005430)	JMY (ENSBGRG00000005553) #7	BHMT (ENSBGRG00000005578) #8	ENSBGRG00000005598 #9	DMGDH (ENSBGRG00000005663) #10	ARSB (ENSBGRG00000005773) #11	ENSBGRG00000005848	LHFPL2 (ENSBGRG00000005875) #13	SCAMP1 (ENSBGRG00000005900) #14	AP3B1 (ENSBGRG00000006021) #17	ENSBGRG00000006222	TBCA (ENSBGRG00000006236) #21	OTP (ENSBGRG00000006298) #22	WDR41 (ENSBGRG00000006363)	PDE8B (ENSBGRG00000006555)	ZBED3 (ENSBGRG00000007380)	AGGF1 (ENSBGRG00000007412)	ENSBGRG00000007739	S100Z (ENSBGRG00000007761)	ENSBGRG00000007803	F2RL1 (ENSBGRG00000007822)	F2R (ENSBGRG00000007892)	IQGAP2 (ENSBGRG00000007931)	F2RL2 (ENSBGRG00000008567)	ENSBGRG00000008593	SV2C (ENSBGRG00000008621)	POC5 (ENSBGRG00000008737)	POLK (ENSBGRG00000009306)
Bos_b	ANCESTRAL SPECIES	28	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640.g	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000001830.i.a.a.b	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000156667	ENSGT00940000155123.b
Cow	MODERN SPECIES	1	THBS4 (ENSBTAG00000012866)	MTX3 (ENSBTAG00000013132)	CMYA5 (ENSBTAG00000006823)	TENT2 (ENSBTAG00000006751)	HOMER1 (ENSBTAG00000025853)	JMY (ENSBTAG00000025856) #7	BHMT (ENSBTAG00000002255) #8	BHMT2 (ENSBTAG00000038234) #9	DMGDH (ENSBTAG00000002110) #10	ARSB (ENSBTAG00000008341) #11	LHFPL2 (ENSBTAG00000007374) #13	SCAMP1 (ENSBTAG00000007371) #14	AP3B1 (ENSBTAG00000005016) #17	ENSBTAG00000052130	TBCA (ENSBTAG00000003263) #21	OTP (ENSBTAG00000009249) #22	WDR41 (ENSBTAG00000020212)	PDE8B (ENSBTAG00000020205)	ZBED3 (ENSBTAG00000052845)	AGGF1 (ENSBTAG00000034823)	CRHBP (ENSBTAG00000020202)	S100Z (ENSBTAG00000020201)	F2RL1 (ENSBTAG00000034848)	F2R (ENSBTAG00000020199)	F2RL2 (ENSBTAG00000000898)	IQGAP2 (ENSBTAG00000000897)	ENSBTAG00000052974	SV2C (ENSBTAG00000017507)	POC5 (ENSBTAG00000007114)	POLK (ENSBTAG00000004028)	CERT1 (ENSBTAG00000000081)
Hybrid Bos Indicus	MODERN SPECIES	1	MTX3 (ENSBIXG00005008721)	CMYA5 (ENSBIXG00005000285)	TENT2 (ENSBIXG00005008948)	HOMER1 (ENSBIXG00005009070)	JMY (ENSBIXG00005009181) #7	BHMT (ENSBIXG00005009216) #8	BHMT2 (ENSBIXG00005009277) #9	DMGDH (ENSBIXG00005009320) #10	ENSBIXG00005009344	ARSB (ENSBIXG00005009357) #11	SCAMP1 (ENSBIXG00005009438) #14	ENSBIXG00005009460	AP3B1 (ENSBIXG00005009658) #17	ENSBIXG00005009736	TBCA (ENSBIXG00005000599) #21	OTP (ENSBIXG00005009799) #22	WDR41 (ENSBIXG00005009893)	ENSBIXG00005000677	PDE8B (ENSBIXG00005010189)	ENSBIXG00005010267	AGGF1 (ENSBIXG00005010286)	CRHBP (ENSBIXG00005000840)	S100Z (ENSBIXG00005010347)	F2R (ENSBIXG00005000862)	F2RL2 (ENSBIXG00005010387)	IQGAP2 (ENSBIXG00005010623)	ENSBIXG00005007521	SV2C (ENSBIXG00005010694)	POC5 (ENSBIXG00005010780)	POLK (ENSBIXG00005011147)	CERT1 (ENSBIXG00005011247)
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Carnivora	ANCESTRAL SPECIES	8	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Caniformia	ANCESTRAL SPECIES	5	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305
Canidae	ANCESTRAL SPECIES	52	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000165518	ENSGT00390000004454	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305
Canis_lupus	ANCESTRAL SPECIES	9	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00390000015489.q.a.f.b.b	ENSGT00940000162210.m.b	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00490000043329.a.a.a.pb.b.a.a	ENSGT00950000182940.b.b	ENSGT00940000165518	ENSGT00390000004454	ENSGT00940000156667	ENSGT00940000155123.b
Dingo	MODERN SPECIES	138	CMYA5 (ENSCAFG00020026312)	TENT2 (ENSCAFG00020026305)	HOMER1 (ENSCAFG00020026292)	JMY (ENSCAFG00020026290) #7	BHMT (ENSCAFG00020026286) #8	BHMT2 (ENSCAFG00020026283) #9	DMGDH (ENSCAFG00020026278) #10	ARSB (ENSCAFG00020026275) #11	ENSCAFG00020026273	ENSCAFG00020026272	ENSCAFG00020026271	LHFPL2 (ENSCAFG00020026266) #13	SCAMP1 (ENSCAFG00020026258) #14	AP3B1 (ENSCAFG00020026199) #17	TBCA (ENSCAFG00020026187) #21	OTP (ENSCAFG00020026185) #22	WDR41 (ENSCAFG00020026182)	PDE8B (ENSCAFG00020026022)	ENSCAFG00020025990	AGGF1 (ENSCAFG00020025988)	CRHBP (ENSCAFG00020025980)	F2RL1 (ENSCAFG00020025974)	F2R (ENSCAFG00020025967)	F2RL2 (ENSCAFG00020025959)	ENSCAFG00020025957	IQGAP2 (ENSCAFG00020025766)	SV2C (ENSCAFG00020025712)	ENSCAFG00020025705	POC5 (ENSCAFG00020025700)	POLK (ENSCAFG00020025589)	CERT1 (ENSCAFG00020025372)
Dog	MODERN SPECIES	22	CMYA5 (ENSCAFG00845006378)	TENT2 (ENSCAFG00845006530)	HOMER1 (ENSCAFG00845006728)	JMY (ENSCAFG00845007064) #7	BHMT (ENSCAFG00845007347) #8	BHMT2 (ENSCAFG00845007477) #9	DMGDH (ENSCAFG00845007613) #10	ARSB (ENSCAFG00845007767) #11	ENSCAFG00845007889	ENSCAFG00845007955	ENSCAFG00845008040 #13	SCAMP1 (ENSCAFG00845008131) #14	ENSCAFG00845008191	AP3B1 (ENSCAFG00845008344) #17	TBCA (ENSCAFG00845008735) #21	OTP (ENSCAFG00845008819) #22	WDR41 (ENSCAFG00845008881)	PDE8B (ENSCAFG00845009245)	ZBED3 (ENSCAFG00845009893)	AGGF1 (ENSCAFG00845010001)	CRHBP (ENSCAFG00845010170)	F2RL1 (ENSCAFG00845010229)	F2R (ENSCAFG00845010276)	IQGAP2 (ENSCAFG00845010426)	F2RL2 (ENSCAFG00845010868)	ENSCAFG00845010892	SV2C (ENSCAFG00845010918)	ENSCAFG00845010968	POC5 (ENSCAFG00845011018)	POLK (ENSCAFG00845011326)	CERT1 (ENSCAFG00845011641)
Red fox	MODERN SPECIES	27	THBS4 (ENSVVUG00000024964)	MTX3 (ENSVVUG00000024969)	ENSVVUG00000024973	CMYA5 (ENSVVUG00000024975)	TENT2 (ENSVVUG00000024977)	HOMER1 (ENSVVUG00000024979)	JMY (ENSVVUG00000024988) #7	DMGDH (ENSVVUG00000025013) #10	BHMT2 (ENSVVUG00000025018) #9	BHMT (ENSVVUG00000025022) #8	ENSVVUG00000025030	LHFPL2 (ENSVVUG00000025039) #13	SCAMP1 (ENSVVUG00000025046) #14	AP3B1 (ENSVVUG00000025056) #17	ENSVVUG00000025093	OTP (ENSVVUG00000025094) #22	WDR41 (ENSVVUG00000025096)	PDE8B (ENSVVUG00000025106)	AGGF1 (ENSVVUG00000025114)	CRHBP (ENSVVUG00000025121)	F2RL1 (ENSVVUG00000025124)	F2R (ENSVVUG00000025128)	IQGAP2 (ENSVVUG00000025132)	F2RL2 (ENSVVUG00000025145)	ENSVVUG00000025148	SV2C (ENSVVUG00000025157)	ENSVVUG00000025163	ENSVVUG00000025164	POC5 (ENSVVUG00000025166)	POLK (ENSVVUG00000025177)	COL4A3BP (ENSVVUG00000025182)
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305
Mustelinae	ANCESTRAL SPECIES	38	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00940000153593.c.b	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305
Ferret	MODERN SPECIES	286	THBS4 (ENSMPUG00000004875)	MTX3 (ENSMPUG00000004895)	CMYA5 (ENSMPUG00000004971)	TENT2 (ENSMPUG00000004983)	HOMER1 (ENSMPUG00000004991)	JMY (ENSMPUG00000005003) #7	BHMT (ENSMPUG00000005014) #8	DMGDH (ENSMPUG00000005093) #10	ARSB (ENSMPUG00000005100) #11	LHFPL2 (ENSMPUG00000005146) #13	SCAMP1 (ENSMPUG00000005152) #14	AP3B1 (ENSMPUG00000005160) #17	ENSMPUG00000005174	ENSMPUG00000018799	ENSMPUG00000005179	OTP (ENSMPUG00000005191) #22	ENSMPUG00000018800	WDR41 (ENSMPUG00000005197)	PDE8B (ENSMPUG00000005262)	AGGF1 (ENSMPUG00000005518)	CRHBP (ENSMPUG00000005538)	F2RL1 (ENSMPUG00000005551)	F2R (ENSMPUG00000005558)	IQGAP2 (ENSMPUG00000005569)	F2RL2 (ENSMPUG00000005597)	SV2C (ENSMPUG00000005606)	POC5 (ENSMPUG00000005619)	ANKDD1B (ENSMPUG00000005630)	POLK (ENSMPUG00000005641)	CERT1 (ENSMPUG00000005653)	HMGCR (ENSMPUG00000005662)
American mink	MODERN SPECIES	112	THBS4 (ENSNVIG00000001935)	MTX3 (ENSNVIG00000002002)	CMYA5 (ENSNVIG00000002033)	TENT2 (ENSNVIG00000002064)	HOMER1 (ENSNVIG00000002206)	JMY (ENSNVIG00000002287) #7	ENSNVIG00000002323	BHMT (ENSNVIG00000002335) #8	DMGDH (ENSNVIG00000002369) #10	ARSB (ENSNVIG00000002402) #11	LHPL2 (ENSNVIG00000002454) #13	SCAMP1 (ENSNVIG00000002476) #14	AP3B1 (ENSNVIG00000002504) #17	ENSNVIG00000002585	TBCA (ENSNVIG00000002606) #21	OTP (ENSNVIG00000002637) #22	WDR41 (ENSNVIG00000002651)	ENSNVIG00000002723	ZBED3 (ENSNVIG00000002773)	AGGF1 (ENSNVIG00000002783)	CRHBP (ENSNVIG00000002829)	F2RL1 (ENSNVIG00000002854)	F2R (ENSNVIG00000002863)	IQGAP2 (ENSNVIG00000002874)	PAR3 (ENSNVIG00000003032)	SV2C (ENSNVIG00000003066)
Ursidae	ANCESTRAL SPECIES	16	ENSGT01030000234623.a.b.a	ENSGT00940000155227.h.b	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305	ENSGT00950000182967.a.a.a.a.a.a.d
Ursus	ANCESTRAL SPECIES	3	ENSGT00940000155227.h.b	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00940000170540	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00950000182901.a.a.b.a.b.b	ENSGT00940000156667	ENSGT00940000155123.b
American black bear	MODERN SPECIES	1482															TBCA (ENSUAMG00000019295) #21	OTP (ENSUAMG00000019294) #22	WDR41 (ENSUAMG00000019293)	ENSUAMG00000019292
Giant Panda	MODERN SPECIES	13	SERINC5 (ENSAMEG00000015721)	THBS4 (ENSAMEG00000015652)	MTX3 (ENSAMEG00000015643)	CMYA5 (ENSAMEG00000015633)	TENT2 (ENSAMEG00000015619)	HOMER1 (ENSAMEG00000015607)	JMY (ENSAMEG00000015594) #7	BHMT (ENSAMEG00000005696) #8	BHMT2 (ENSAMEG00000005719) #9	DMGDH (ENSAMEG00000005739) #10	ARSB (ENSAMEG00000005783) #11	LHFPL2 (ENSAMEG00000005794) #13	SCAMP1 (ENSAMEG00000005799) #14	AP3B1 (ENSAMEG00000005816) #17	TBCA (ENSAMEG00000027837) #21	OTP (ENSAMEG00000028076) #22	WDR41 (ENSAMEG00000005933)	ENSAMEG00000028764	PDE8B (ENSAMEG00000005971)	AGGF1 (ENSAMEG00000001833)	CRHBP (ENSAMEG00000001817)	F2RL1 (ENSAMEG00000001809)	F2R (ENSAMEG00000018602)	F2RL2 (ENSAMEG00000001805)	IQGAP2 (ENSAMEG00000001638)	SV2C (ENSAMEG00000000836)	POC5 (ENSAMEG00000000800)	ANKDD1B (ENSAMEG00000000782)	POLK (ENSAMEG00000000744)	CERT1 (ENSAMEG00000000701)	HMGCR (ENSAMEG00000000634)
Felidae	ANCESTRAL SPECIES	6	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000003115.j	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667
Panthera	ANCESTRAL SPECIES	6	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000003115.j	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667
Tiger	MODERN SPECIES	134	SERINC5 (ENSPTIG00000011391)	THBS4 (ENSPTIG00000012684)	ENSPTIG00000014075	CMYA5 (ENSPTIG00000014447)	TENT2 (ENSPTIG00000015267)	HOMER1 (ENSPTIG00000018119)	JMY (ENSPTIG00000019858) #7	BHMT (ENSPTIG00000020191) #8	BHMT2 (ENSPTIG00000020984) #9	DMGDH (ENSPTIG00000021430) #10	ARSB (ENSPTIG00000003156) #11	LHFPL2 (ENSPTIG00000006957) #13	SCAMP1 (ENSPTIG00000007335) #14	AP3B1 (ENSPTIG00000008485) #17	TBCA (ENSPTIG00000009506) #21	OTP (ENSPTIG00000011169) #22	WDR41 (ENSPTIG00000011923)	PDE8B (ENSPTIG00000014747)	AGGF1 (ENSPTIG00000021519)	CRHBP (ENSPTIG00000021691)	S100Z (ENSPTIG00000021832)	F2RL1 (ENSPTIG00000021859)	F2R (ENSPTIG00000021894)	IQGAP2 (ENSPTIG00000021975)	F2RL2 (ENSPTIG00000009666)	SV2C (ENSPTIG00000010098)	POC5 (ENSPTIG00000011856)	ANKDD1B (ENSPTIG00000013441)	POLK (ENSPTIG00000014864)	CERT1 (ENSPTIG00000016589)	HMGCR (ENSPTIG00000018612)
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00950000183010.a.a.a.b.b	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00390000009443.j	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000003115.j	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667
leopard	MODERN SPECIES	40	CMYA5 (ENSPPRG00000010137)	ENSPPRG00000018657	TENT2 (ENSPPRG00000008396)	HOMER1 (ENSPPRG00000006866)	JMY (ENSPPRG00000004743) #7	BHMT (ENSPPRG00000004028) #8	BHMT2 (ENSPPRG00000003496) #9	DMGDH (ENSPPRG00000002973) #10	ARSB (ENSPPRG00000002867) #11	ENSPPRG00000000967	LHFPL2 (ENSPPRG00000000681) #13	SCAMP1 (ENSPPRG00000000330) #14	ENSPPRG00000020501	AP3B1 (ENSPPRG00000019993) #17	TBCA (ENSPPRG00000018237) #21	OTP (ENSPPRG00000015334) #22	WDR41 (ENSPPRG00000015058)	PDE8B (ENSPPRG00000012726)	ZBED3 (ENSPPRG00000017742)	AGGF1 (ENSPPRG00000004438)	CRHBP (ENSPPRG00000002387)	S100Z (ENSPPRG00000002129)	F2RL1 (ENSPPRG00000001778)	F2R (ENSPPRG00000001748)	IQGAP2 (ENSPPRG00000001278)	F2RL2 (ENSPPRG00000024088)	SV2C (ENSPPRG00000024498)	ENSPPRG00000021813	POC5 (ENSPPRG00000017915)	ANKDD1B (ENSPPRG00000013528)	POLK (ENSPPRG00000012504)
lion	MODERN SPECIES		MTX3 (ENSPLOG00000000460)	CMYA5 (ENSPLOG00000000485)	ENSPLOG00000000504	TENT2 (ENSPLOG00000000530)	HOMER1 (ENSPLOG00000000572)	JMY (ENSPLOG00000000614) #7	BHMT (ENSPLOG00000000665) #8	BHMT2 (ENSPLOG00000000718) #9	DMGDH (ENSPLOG00000000773) #10	ARSB (ENSPLOG00000000803) #11	ENSPLOG00000000818	LHFPL2 (ENSPLOG00000000832) #13	SCAMP1 (ENSPLOG00000000849) #14	AP3B1 (ENSPLOG00000000902) #17	TBCA (ENSPLOG00000001046) #21	OTP (ENSPLOG00000001071) #22	WDR41 (ENSPLOG00000001110)	PDE8B (ENSPLOG00000001335)	ZBED3 (ENSPLOG00000001610)	AGGF1 (ENSPLOG00000001638)	CRHBP (ENSPLOG00000001686)	S100Z (ENSPLOG00000001701)	F2RL1 (ENSPLOG00000001714)	F2R (ENSPLOG00000001727)	IQGAP2 (ENSPLOG00000001777)	F2RL2 (ENSPLOG00000001850)	SV2C (ENSPLOG00000001869)	ENSPLOG00000001913	POC5 (ENSPLOG00000001946)	ANKDD1B (ENSPLOG00000002011)	POLK (ENSPLOG00000002076)
Cat	MODERN SPECIES		SPZ1 (ENSFCAG00000043127)	SERINC5 (ENSFCAG00000003881)	THBS4 (ENSFCAG00000003879)	MTX3 (ENSFCAG00000003877)	CMYA5 (ENSFCAG00000000223)	TENT2 (ENSFCAG00000027560)	HOMER1 (ENSFCAG00000015755)	JMY (ENSFCAG00000025959) #7	BHMT (ENSFCAG00000040239) #8	DMGDH (ENSFCAG00000011882) #10	ENSFCAG00000035649	ARSB (ENSFCAG00000033754) #11	SCAMP1 (ENSFCAG00000007805) #14	AP3B1 (ENSFCAG00000030762) #17	TBCA (ENSFCAG00000026107) #21	OTP (ENSFCAG00000032267) #22	WDR41 (ENSFCAG00000026146)	PDE8B (ENSFCAG00000005432)	ZBED3 (ENSFCAG00000044339)	AGGF1 (ENSFCAG00000018724)	CRHBP (ENSFCAG00000023090)	S100Z (ENSFCAG00000044986)	F2R (ENSFCAG00000003325)	F2RL2 (ENSFCAG00000040850)	IQGAP2 (ENSFCAG00000003323)	SV2C (ENSFCAG00000003321)	ENSFCAG00000048312	POC5 (ENSFCAG00000009661)	ANKDD1B (ENSFCAG00000009659)	POLK (ENSFCAG00000001614)	CERT1 (ENSFCAG00000031307)
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Chiroptera	ANCESTRAL SPECIES	1	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305
Greater horseshoe bat	MODERN SPECIES	25	MTX3 (ENSRFEG00010019245)	CMYA5 (ENSRFEG00010019210)	TENT2 (ENSRFEG00010019113)	HOMER1 (ENSRFEG00010018881)	JMY (ENSRFEG00010018821) #7	BHMT (ENSRFEG00010018771) #8	BHMT2 (ENSRFEG00010018710) #9	DMGDH (ENSRFEG00010018532) #10	ARSB (ENSRFEG00010018336) #11	LHFPL2 (ENSRFEG00010018294) #13	SCAMP1 (ENSRFEG00010018228) #14	ENSRFEG00010018181	ENSRFEG00010018153	AP3B1 (ENSRFEG00010018051) #17	TBCA (ENSRFEG00010017900) #21	OTP (ENSRFEG00010017860) #22	WDR41 (ENSRFEG00010017690)	PDE8B (ENSRFEG00010016179)	ZBED3 (ENSRFEG00010016086)	AGGF1 (ENSRFEG00010016035)	S100Z (ENSRFEG00010015950)	CRHBP (ENSRFEG00010015859)	F2RL1 (ENSRFEG00010015917)	F2R (ENSRFEG00010015825)	F2RL2 (ENSRFEG00010015786)	IQGAP2 (ENSRFEG00010014371)	SV2C (ENSRFEG00010014249)	POC5 (ENSRFEG00010014089)	ANKDD1B (ENSRFEG00010013842)	POLK (ENSRFEG00010013650)	CERT1 (ENSRFEG00010013140)
Microbat	MODERN SPECIES	937	THBS4 (ENSMLUG00000013206)	MTX3 (ENSMLUG00000013201)	ENSMLUG00000026872	CMYA5 (ENSMLUG00000011014)	TENT2 (ENSMLUG00000010990)	HOMER1 (ENSMLUG00000010972)	JMY (ENSMLUG00000000275) #7	BHMT (ENSMLUG00000009164) #8	BHMT2 (ENSMLUG00000009152) #9	DMGDH (ENSMLUG00000009128) #10	ARSB (ENSMLUG00000001949) #11	LHFPL2 (ENSMLUG00000006700) #13	SCAMP1 (ENSMLUG00000006679) #14	AP3B1 (ENSMLUG00000006637) #17	TBCA (ENSMLUG00000001087) #21	OTP (ENSMLUG00000028781) #22	WDR41 (ENSMLUG00000016814)	PDE8B (ENSMLUG00000016798)	AGGF1 (ENSMLUG00000016792)	CRHBP (ENSMLUG00000025557)	ENSMLUG00000006790	F2R (ENSMLUG00000029641)	IQGAP2 (ENSMLUG00000006695)	F2RL2 (ENSMLUG00000006767)	SV2C (ENSMLUG00000006658)	POC5 (ENSMLUG00000015701)	ANKDD1B (ENSMLUG00000015695)	POLK (ENSMLUG00000015681)	CERT1 (ENSMLUG00000004251)	HMGCR (ENSMLUG00000004238)	GCNT4 (ENSMLUG00000003938)
Megabat	MODERN SPECIES	2274												LHFPL2 (ENSPVAG00000011639) #13	SCAMP1 (ENSPVAG00000011637) #14	AP3B1 (ENSPVAG00000011634) #17	TBCA (ENSPVAG00000011633) #21	OTP (ENSPVAG00000011630) #22
Equus	ANCESTRAL SPECIES	6	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Horse	MODERN SPECIES	5	MTX3 (ENSECAG00000008541)	CMYA5 (ENSECAG00000034911)	TENT2 (ENSECAG00000012698)	HOMER1 (ENSECAG00000013350)	ENSECAG00000039002	JMY (ENSECAG00000014968) #7	ENSECAG00000052194	BHMT (ENSECAG00000015626) #8	DMGDH (ENSECAG00000019851) #10	BHMT2 (ENSECAG00000018440) #9	ARSB (ENSECAG00000020847) #11	LHFPL2 (ENSECAG00000021890) #13	SCAMP1 (ENSECAG00000021921) #14	AP3B1 (ENSECAG00000022849) #17	TBCA (ENSECAG00000009383) #21	OTP (ENSECAG00000009423) #22	WDR41 (ENSECAG00000009496)	PDE8B (ENSECAG00000012189)	ZBED3 (ENSECAG00000040464)	CRHBP (ENSECAG00000017949)	F2R (ENSECAG00000004055)	S100Z (ENSECAG00000000977)	F2RL1 (ENSECAG00000002867)	IQGAP2 (ENSECAG00000004274)	F2RL2 (ENSECAG00000010531)	SV2C (ENSECAG00000010569)	POC5 (ENSECAG00000013824)	ANKDD1B (ENSECAG00000014521)	POLK (ENSECAG00000014876)	CERT1 (ENSECAG00000017349)	HMGCR (ENSECAG00000021330)
Donkey	MODERN SPECIES	29	THBS4 (ENSEASG00005002059)	MTX3 (ENSEASG00005002019)	CMYA5 (ENSEASG00005037295)	TENT2 (ENSEASG00005001993)	HOMER1 (ENSEASG00005001988)	JMY (ENSEASG00005001982) #7	BHMT (ENSEASG00005001952) #8	BHMT2 (ENSEASG00005001941) #9	DMGDH (ENSEASG00005001920) #10	ARSB (ENSEASG00005001910) #11	LHFPL2 (ENSEASG00005001904) #13	SCAMP1 (ENSEASG00005001900) #14	AP3B1 (ENSEASG00005001889) #17	ENSEASG00005028729 #21	ENSEASG00005032921	OTP (ENSEASG00005001863) #22	WDR41 (ENSEASG00005001862)	PDE8B (ENSEASG00005001845)	ZBED3 (ENSEASG00005034455)	AGGF1 (ENSEASG00005001829)	CRHBP (ENSEASG00005001822)	S100Z (ENSEASG00005001816)	F2RL1 (ENSEASG00005001812)	F2R (ENSEASG00005037330)	IQGAP2 (ENSEASG00005000244)	F2RL2 (ENSEASG00005036850)	SV2C (ENSEASG00005018455)	POC5 (ENSEASG00005018452)	ANKDD1B (ENSEASG00005035528)	POLK (ENSEASG00005018442)	CERT1 (ENSEASG00005018435)
Atlantogenata	ANCESTRAL SPECIES		ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000159952 #22
Armadillo	MODERN SPECIES	2034																OTP (ENSDNOG00000042520) #22	ENSDNOG00000043348	WDR41 (ENSDNOG00000038131)	PDE8B (ENSDNOG00000004221)
Afrotheria	ANCESTRAL SPECIES	12	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Afrotheria_a	ANCESTRAL SPECIES	12	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000164103	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Elephant	MODERN SPECIES	526	MTX3 (ENSLAFG00000001716)	ENSLAFG00000013738	ENSLAFG00000029991	TENT2 (ENSLAFG00000009190)	HOMER1 (ENSLAFG00000020530)	ENSLAFG00000029613	JMY (ENSLAFG00000006216) #7	BHMT (ENSLAFG00000018074) #8	BHMT2 (ENSLAFG00000018070) #9	DMGDH (ENSLAFG00000018061) #10	ARSB (ENSLAFG00000018055) #11	LHFPL2 (ENSLAFG00000009378) #13	SCAMP1 (ENSLAFG00000009372) #14	AP3B1 (ENSLAFG00000010496) #17	TBCA (ENSLAFG00000005316) #21	OTP (ENSLAFG00000007704) #22	WDR41 (ENSLAFG00000005066)	PDE8B (ENSLAFG00000015612)	ZBED3 (ENSLAFG00000001192)	AGGF1 (ENSLAFG00000012029)	ENSLAFG00000027371	CRHBP (ENSLAFG00000013037)	S100Z (ENSLAFG00000013035)	F2RL1 (ENSLAFG00000001287)	F2R (ENSLAFG00000003741)	F2RL2 (ENSLAFG00000029045)	IQGAP2 (ENSLAFG00000000760)	SV2C (ENSLAFG00000003003)	POC5 (ENSLAFG00000014703)	ANKDD1B (ENSLAFG00000020937)	POLK (ENSLAFG00000013297)
Tenrec	MODERN SPECIES	16884																OTP (ENSETEG00000010175) #22
Marsupialia	ANCESTRAL SPECIES	1	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000163343	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Opossum	MODERN SPECIES	2	ENSMODG00000044289	TENT2 (ENSMODG00000019716)	HOMER1 (ENSMODG00000019719)	JMY (ENSMODG00000019723) #7	ENSMODG00000039958	BHMT (ENSMODG00000025328) #8	DMGDH (ENSMODG00000019727) #10	ARSB (ENSMODG00000019728) #11	ENSMODG00000044503	ENSMODG00000050358	LHFPL2 (ENSMODG00000019730) #13	SCAMP1 (ENSMODG00000019731) #14	AP3B1 (ENSMODG00000019733) #17	ENSMODG00000050949	ENSMODG00000050562 #21	OTP (ENSMODG00000019736) #22	WDR41 (ENSMODG00000019738)	PDE8B (ENSMODG00000019740)	ENSMODG00000044321	ENSMODG00000025309	AGGF1 (ENSMODG00000019743)	CRHBP (ENSMODG00000019745)	S100Z (ENSMODG00000019747)	ENSMODG00000013568	F2RL2 (ENSMODG00000036999)	F2R (ENSMODG00000013575)	ENSMODG00000038124	F2RL1 (ENSMODG00000013578)	PHAX (ENSMODG00000000986)	ALDH7A1 (ENSMODG00000001001)	GRAMD2B (ENSMODG00000001027)
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305
Tasmanian devil	MODERN SPECIES		THBS4 (ENSSHAG00000010181)	MTX3 (ENSSHAG00000010987)	ENSSHAG00000026281	ENSSHAG00000028352	TENT2 (ENSSHAG00000012861)	HOMER1 (ENSSHAG00000013501)	JMY (ENSSHAG00000014317) #7	BHMT (ENSSHAG00000014860) #8	BHMT2 (ENSSHAG00000014959) #9	DMGDH (ENSSHAG00000014992) #10	ARSB (ENSSHAG00000015401) #11	LHFPL2 (ENSSHAG00000028883) #13	SCAMP1 (ENSSHAG00000016943) #14	AP3B1 (ENSSHAG00000017224) #17	TBCA (ENSSHAG00000025953) #21	OTP (ENSSHAG00000018090) #22	WDR41 (ENSSHAG00000018180)	PDE8B (ENSSHAG00000018263)	AGGF1 (ENSSHAG00000004570)	CRHBP (ENSSHAG00000006864)	S100Z (ENSSHAG00000028739)	F2RL1 (ENSSHAG00000008088)	F2R (ENSSHAG00000009153)	IQGAP2 (ENSSHAG00000001152)	F2RL2 (ENSSHAG00000028606)	SV2C (ENSSHAG00000011331)	POC5 (ENSSHAG00000008712)	ANKDD1B (ENSSHAG00000028889)	POLK (ENSSHAG00000006899)	CERT1 (ENSSHAG00000004954)	HMGCR (ENSSHAG00000004177)
Diprotodontia	ANCESTRAL SPECIES	1	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000163343	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000179410	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.c.a #8	ENSGT00390000003122.c.b #9	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00940000163343	ENSGT00980000201383.C	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00390000004454	ENSGT00940000154170.A	ENSGT00940000156667
koala	MODERN SPECIES	73	MTX3 (ENSPCIG00000000698)	ENSPCIG00000000662	ENSPCIG00000000433	TENT2 (ENSPCIG00000000393)	HOMER1 (ENSPCIG00000011621)	JMY (ENSPCIG00000011631) #7	BHMT (ENSPCIG00000009033) #8	ENSPCIG00000032210 #9	DMGDH (ENSPCIG00000013849) #10	ARSB (ENSPCIG00000028419) #11	LHFPL2 (ENSPCIG00000024952) #13	SCAMP1 (ENSPCIG00000024949) #14	ENSPCIG00000031686 #17	ENSPCIG00000017497 #17	ENSPCIG00000014903 #21	OTP (ENSPCIG00000014906) #22	WDR41 (ENSPCIG00000002260)	PDE8B (ENSPCIG00000002178)	ENSPCIG00000002120	ENSPCIG00000002090	AGGF1 (ENSPCIG00000002077)	CRHBP (ENSPCIG00000032088)	S100Z (ENSPCIG00000036527)	F2RL1 (ENSPCIG00000002046)	F2R (ENSPCIG00000002013)	IQGAP2 (ENSPCIG00000028736)	F2RL2 (ENSPCIG00000029189)	SV2C (ENSPCIG00000027306)	ENSPCIG00000027308	ENSPCIG00000027312	POLK (ENSPCIG00000027316)
Common wonbat	MODERN SPECIES	1011	ENSVURG00010019348	ENSVURG00010019330	TENT2 (ENSVURG00010019292)	HOMER1 (ENSVURG00010019264)	JMY (ENSVURG00010019242) #7	ENSVURG00010019232	BHMT2 (ENSVURG00010019219) #9	DMGDH (ENSVURG00010019203) #10	ARSB (ENSVURG00010019193) #11	LHFPL2 (ENSVURG00010019186) #13	SCAMP1 (ENSVURG00010019174) #14	ENSVURG00010019164	AP3B1 (ENSVURG00010019144) #17	ENSVURG00010019136	ENSVURG00010019130	OTP (ENSVURG00010019123) #22	WDR41 (ENSVURG00010019111)	PDE8B (ENSVURG00010016850)	ENSVURG00010016681	ENSVURG00010016663	ENSVURG00010016651	ENSVURG00010016641	CRHBP (ENSVURG00010016624)	S100Z (ENSVURG00010016607)	F2RL1 (ENSVURG00010016599)	F2R (ENSVURG00010016592)	F2RL2 (ENSVURG00010016587)	IQGAP2 (ENSVURG00010016559)	SV2C (ENSVURG00010016524)	POC5 (ENSVURG00010016492)	ANKDD1B (ENSVURG00010016454)
Wallaby	MODERN SPECIES	8025																ENSMEUG00000009207 #22
Platypus	MODERN SPECIES		MRPS36 (ENSOANG00000046008)	SERINC5 (ENSOANG00000007885)	THBS4 (ENSOANG00000044275)	MTX3 (ENSOANG00000012639)	ENSOANG00000039864	TENT2 (ENSOANG00000007888)	HOMER1 (ENSOANG00000007891)	JMY (ENSOANG00000007892) #7	ENSOANG00000007895 #8	DMGDH (ENSOANG00000007898) #10	ARSB (ENSOANG00000007901) #11	LHFPL2 (ENSOANG00000037815) #13	SCAMP1 (ENSOANG00000045234) #14	AP3B1 (ENSOANG00000003100) #17	ENSOANG00000036619	OTP (ENSOANG00000039355) #22	WDR41 (ENSOANG00000003103)	PDE8B (ENSOANG00000003104)	ENSOANG00000015761	AGGF1 (ENSOANG00000015762)	CRHBP (ENSOANG00000031473)	S100Z (ENSOANG00000015763)	F2R (ENSOANG00000039957)	F2RL2 (ENSOANG00000015767)	IQGAP2 (ENSOANG00000015766)	SV2C (ENSOANG00000015768)	POC5 (ENSOANG00000015769)	ENSOANG00000040574	POLK (ENSOANG00000015770)	CERT1 (ENSOANG00000015771)	HMGCR (ENSOANG00000014109)
Sauria	ANCESTRAL SPECIES	5	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305
Episquamata	ANCESTRAL SPECIES	6	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b.j	ENSGT01050000244840.A.a.b.i	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00940000159238.b.d.a	ENSGT00390000010652.D.b	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b.j	ENSGT01050000244840.A.a.b.i	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Elapidae	ANCESTRAL SPECIES	7	ENSGT00940000159238.b.d.a	ENSGT00390000010652.D.b	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b.j	ENSGT01050000244840.A.a.b.i	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667.g	ENSGT00940000155123.b
Elapidae_a	ANCESTRAL SPECIES	9	ENSGT00390000010652.D.b	ENSGT01030000234623.a.b.a.d	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710.fb #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b.j	ENSGT01050000244840.A.a.b.i	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667.g	ENSGT00940000155123.b
Acanthophiinae	ANCESTRAL SPECIES	9	ENSGT00390000010652.D.b	ENSGT01030000234623.a.b.a.d	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710.fb #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b.j	ENSGT01050000244840.A.a.b.i	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667.g	ENSGT00940000155123.b
Mainland tiger snake	MODERN SPECIES	33	CDK7 (ENSNSUG00000007132)	SERINC5 (ENSNSUG00000007170)	ENSNSUG00000007206	MTX3 (ENSNSUG00000007207)	ENSNSUG00000007222	TENT2 (ENSNSUG00000007340)	HOMER1 (ENSNSUG00000007342)	JMY (ENSNSUG00000007346) #7	ENSNSUG00000007351 #8	DMGDH (ENSNSUG00000007356) #10	ARSB (ENSNSUG00000007357) #11	LHFPL2 (ENSNSUG00000007360) #13	SCAMP1 (ENSNSUG00000007366) #14	AP3B1 (ENSNSUG00000007370) #17	ENSNSUG00000007432 #21	OTP (ENSNSUG00000007466) #22	ENSNSUG00000007467	PDE8B (ENSNSUG00000007470)	AGGF1 (ENSNSUG00000008042)	CRHBP (ENSNSUG00000008150)	S100Z (ENSNSUG00000008153)	F2RL1 (ENSNSUG00000008164)	ENSNSUG00000008165	ENSNSUG00000008166	IQGAP2 (ENSNSUG00000008168)	F2RL2 (ENSNSUG00000010480)	SV2C (ENSNSUG00000010481)	ENSNSUG00000010508	ANKDD1B (ENSNSUG00000010511)	POLK (ENSNSUG00000010513)	CERT1 (ENSNSUG00000010520)
Eastern brown snake	MODERN SPECIES	2	CDK7 (ENSPTXG00000002404)	SERINC5 (ENSPTXG00000002407)	ENSPTXG00000002410	MTX3 (ENSPTXG00000002412)	ENSPTXG00000002415	TENT2 (ENSPTXG00000002511)	HOMER1 (ENSPTXG00000002526)	JMY (ENSPTXG00000002530) #7	ENSPTXG00000002535 #8	DMGDH (ENSPTXG00000002538) #10	ARSB (ENSPTXG00000002543) #11	LHFPL2 (ENSPTXG00000002546) #13	SCAMP1 (ENSPTXG00000002548) #14	AP3B1 (ENSPTXG00000002552) #17	TBCA (ENSPTXG00000002558) #21	OTP (ENSPTXG00000002560) #22	WDR41 (ENSPTXG00000002565)	PDE8B (ENSPTXG00000002569)	AGGF1 (ENSPTXG00000002575)	CRHBP (ENSPTXG00000002580)	S100Z (ENSPTXG00000002582)	F2RL1 (ENSPTXG00000002584)	ENSPTXG00000002586	ENSPTXG00000002587	IQGAP2 (ENSPTXG00000002592)	F2RL2 (ENSPTXG00000002598)	SV2C (ENSPTXG00000002599)	ENSPTXG00000002603	ANKDD1B (ENSPTXG00000002606)	POLK (ENSPTXG00000002608)	CERT1 (ENSPTXG00000002617)
Indian cobra	MODERN SPECIES	1	ENSNNAG00000005380	MTX3 (ENSNNAG00000005360)	ENSNNAG00000005324	TENT2 (ENSNNAG00000005259)	HOMER1 (ENSNNAG00000005204)	JMY (ENSNNAG00000005055) #7	ENSNNAG00000005034 #8	ENSNNAG00000005025 #10	DMGDH (ENSNNAG00000004972) #10	ENSNNAG00000004946 #11	ENSNNAG00000004894 #11	LHFPL2 (ENSNNAG00000004879) #13	SCAMP1 (ENSNNAG00000004867) #14	AP3B1 (ENSNNAG00000004770) #17	TBCA (ENSNNAG00000004751) #21	OTP (ENSNNAG00000004735) #22	WDR41 (ENSNNAG00000004669)	PDE8B (ENSNNAG00000004615)	ENSNNAG00000004588	AGGF1 (ENSNNAG00000003959)	CRHBP (ENSNNAG00000003821)	S100Z (ENSNNAG00000003790)	F2RL1 (ENSNNAG00000003782)	ENSNNAG00000003747	ENSNNAG00000003737	IQGAP2 (ENSNNAG00000006766)	F2RL2 (ENSNNAG00000006742)	ENSNNAG00000006718	ENSNNAG00000006703	SV2C (ENSNNAG00000006660)	ENSNNAG00000006634
Lizard	MODERN SPECIES	1	ENSACAG00000016545	MTX3 (ENSACAG00000016636)	ENSACAG00000040427	ENSACAG00000016641	TENT2 (ENSACAG00000016683)	HOMER1 (ENSACAG00000016736)	JMY (ENSACAG00000016753) #7	ENSACAG00000016768 #8	DMGDH (ENSACAG00000016799) #10	ARSB (ENSACAG00000016838) #11	ENSACAG00000040664	LHFPL2 (ENSACAG00000012574) #13	SCAMP1 (ENSACAG00000012476) #14	AP3B1 (ENSACAG00000007430) #17	tbca (ENSACAG00000035436) #21	OTP (ENSACAG00000030602) #22	WDR41 (ENSACAG00000007717)	PDE8B (ENSACAG00000007748)	AGGF1 (ENSACAG00000007847)	CRHBP (ENSACAG00000007916)	S100Z (ENSACAG00000036691)	F2RL1 (ENSACAG00000007980)	ENSACAG00000037420	ENSACAG00000037432	IQGAP2 (ENSACAG00000007992)	F2RL2 (ENSACAG00000008312)	ENSACAG00000041042	ENSACAG00000035710	ENSACAG00000043111	SV2C (ENSACAG00000008315)	ENSACAG00000008393
Laterata	ANCESTRAL SPECIES	8	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00940000170540	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b.j	ENSGT01050000244840.A.a.b.i	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Common wall lizard	MODERN SPECIES	2	TENT2 (ENSPMRG00000016386)	ENSPMRG00000016399	HOMER1 (ENSPMRG00000016406)	JMY (ENSPMRG00000016420) #7	ENSPMRG00000016449 #8	DMGDH (ENSPMRG00000016457) #10	ARSB (ENSPMRG00000016472) #11	LHFPL2 (ENSPMRG00000016477) #13	ENSPMRG00000016483	SCAMP1 (ENSPMRG00000016489) #14	ENSPMRG00000016558 #17	ENSPMRG00000016877 #17	ENSPMRG00000016887	TBCA (ENSPMRG00000016895) #21	ENSPMRG00000016902	OTP (ENSPMRG00000016904) #22	WDR41 (ENSPMRG00000016907)	PDE8B (ENSPMRG00000016915)	AGGF1 (ENSPMRG00000016929)	CRHBP (ENSPMRG00000016936)	S100Z (ENSPMRG00000016943)	F2RL1 (ENSPMRG00000016949)	ENSPMRG00000016958	ENSPMRG00000016964	ENSPMRG00000016969	ENSPMRG00000016973	ENSPMRG00000016977	IQGAP2 (ENSPMRG00000016986)	F2RL2 (ENSPMRG00000017024)	SV2C (ENSPMRG00000017039)	ENSPMRG00000017062
Argentine black and white tegu	MODERN SPECIES	10	SERINC5 (ENSSMRG00000001077)	ENSSMRG00000001089	MTX3 (ENSSMRG00000001104)	ENSSMRG00000001128	TENT2 (ENSSMRG00000002522)	HOMER1 (ENSSMRG00000002536)	JMY (ENSSMRG00000002543) #7	ENSSMRG00000002563 #8	DMGDH (ENSSMRG00000002569) #10	ARSB (ENSSMRG00000002586) #11	LHFPL2 (ENSSMRG00000002636) #13	SCAMP1 (ENSSMRG00000002646) #14	AP3B1 (ENSSMRG00000002658) #17	ENSSMRG00000002743	ENSSMRG00000002745	OTP (ENSSMRG00000002889) #22	WDR41 (ENSSMRG00000002897)	PDE8B (ENSSMRG00000002916)	AGGF1 (ENSSMRG00000002967)	CRHBP (ENSSMRG00000002991)	S100Z (ENSSMRG00000002998)	F2RL1 (ENSSMRG00000003003)	ENSSMRG00000003010	ENSSMRG00000003014	ENSSMRG00000003017	ENSSMRG00000003024	ENSSMRG00000003030	ENSSMRG00000003039	ENSSMRG00000003045	IQGAP2 (ENSSMRG00000003117)	F2RL2 (ENSSMRG00000003145)
tuatara	MODERN SPECIES	1540														AP3B1 (ENSSPUG00000015564) #17	TBCA (ENSSPUG00000015638) #21	OTP (ENSSPUG00000015641) #22	WDR41 (ENSSPUG00000015653)	PDE8B (ENSSPUG00000015771)	AGGF1 (ENSSPUG00000016142)	CRHBP (ENSSPUG00000016153)	S100Z (ENSSPUG00000016188)	F2RL1 (ENSSPUG00000016201)	ENSSPUG00000016204	ENSSPUG00000016211
Archelosauria	ANCESTRAL SPECIES	7	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Cryptodira	ANCESTRAL SPECIES	9	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.c	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00390000003312
Chinese turtle	MODERN SPECIES	769	CDK7 (ENSPSIG00000010079)	SERINC5 (ENSPSIG00000009368)	ENSPSIG00000009194	MTX3 (ENSPSIG00000009140)	TENT2 (ENSPSIG00000009075)	HOMER1 (ENSPSIG00000008043)	JMY (ENSPSIG00000007866) #7	ENSPSIG00000006482 #8	DMGDH (ENSPSIG00000006338) #10	ENSPSIG00000000958	ARSB (ENSPSIG00000006010) #11	LHFPL2 (ENSPSIG00000006003) #13	SCAMP1 (ENSPSIG00000005353) #14	AP3B1 (ENSPSIG00000015957) #17	TBCA (ENSPSIG00000015832) #21	OTP (ENSPSIG00000015830) #22	WDR41 (ENSPSIG00000015621)	PDE8B (ENSPSIG00000014953)	AGGF1 (ENSPSIG00000014397)	CRHBP (ENSPSIG00000013255)	S100Z (ENSPSIG00000013240)	F2RL1 (ENSPSIG00000000941)	F2R (ENSPSIG00000013235)	F2RL2 (ENSPSIG00000000934)	ENSPSIG00000012702
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.c	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00390000003312
Emydidae	ANCESTRAL SPECIES	7	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.c	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00990000214262	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
painted turtle	MODERN SPECIES	695														AP3B1 (ENSCPBG00000004265) #17	TBCA (ENSCPBG00000004229) #21	OTP (ENSCPBG00000004217) #22	WDR41 (ENSCPBG00000004211)	PDE8B (ENSCPBG00000001910)	AGGF1 (ENSCPBG00000001764)	CRHBP (ENSCPBG00000001749)	S100Z (ENSCPBG00000001741)	F2RL1 (ENSCPBG00000001729)	F2R (ENSCPBG00000001721)	ENSCPBG00000001716	F2RL2 (ENSCPBG00000001709)	ENSCPBG00000001231	SV2C (ENSCPBG00000001171)	ENSCPBG00000001139	ANKDD1B (ENSCPBG00000001071)	POLK (ENSCPBG00000001045)	CERT1 (ENSCPBG00000000976)
Three-toed box turtle	MODERN SPECIES	29	CDK7 (ENSTMTG00000019757)	SERINC5 (ENSTMTG00000019769)	ENSTMTG00000019786	MTX3 (ENSTMTG00000019808)	TENT2 (ENSTMTG00000019839)	ENSTMTG00000019855	HOMER1 (ENSTMTG00000019867)	JMY (ENSTMTG00000019893) #7	ENSTMTG00000019899 #8	DMGDH (ENSTMTG00000019910) #10	ARSB (ENSTMTG00000019924) #11	LHFPL2 (ENSTMTG00000019928) #13	SCAMP1 (ENSTMTG00000019932) #14	AP3B1 (ENSTMTG00000019939) #17	TBCA (ENSTMTG00000019947) #21	OTP (ENSTMTG00000019954) #22	WDR41 (ENSTMTG00000010122)	PDE8B (ENSTMTG00000010141)	AGGF1 (ENSTMTG00000010202)	CRHBP (ENSTMTG00000010221)	S100Z (ENSTMTG00000010247)	F2RL1 (ENSTMTG00000010266)	F2R (ENSTMTG00000010274)	IQGAP2 (ENSTMTG00000010288)	F2RL2 (ENSTMTG00000010445)	ENSTMTG00000010456	SV2C (ENSTMTG00000010477)	ENSTMTG00000010519	ENSTMTG00000010543	ANKDD1B (ENSTMTG00000010565)	POLK (ENSTMTG00000010623)
Testudinidae	ANCESTRAL SPECIES	15	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000156640	ENSGT00940000156354.d	ENSGT00940000156354.c	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00390000003312
Abingdon island giant tortoise	MODERN SPECIES	1718															TBCA (ENSCABG00000006490) #21	OTP (ENSCABG00000006489) #22	WDR41 (ENSCABG00000006484)	PDE8B (ENSCABG00000006444)	ENSCABG00000006443	PFN3 (ENSCABG00000006441)	MTARC2 (ENSCABG00000006432)	HLX (ENSCABG00000006423)	DUSP10 (ENSCABG00000006422)
Goode s thornscrub tortoise	MODERN SPECIES	20	CDK7 (ENSGEVG00005019457)	SERINC5 (ENSGEVG00005019431)	ENSGEVG00005019363	MTX3 (ENSGEVG00005019349)	TENT2 (ENSGEVG00005019320)	HOMER1 (ENSGEVG00005019288)	ENSGEVG00005019265	JMY (ENSGEVG00005019239) #7	ENSGEVG00005019199 #8	DMGDH (ENSGEVG00005017878) #10	ARSB (ENSGEVG00005017597) #11	LHFPL2 (ENSGEVG00005017571) #13	SCAMP1 (ENSGEVG00005017551) #14	AP3B1 (ENSGEVG00005017453) #17	TBCA (ENSGEVG00005017424) #21	OTP (ENSGEVG00005017397) #22	WDR41 (ENSGEVG00005017322)	PDE8B (ENSGEVG00005017191)	AGGF1 (ENSGEVG00005017135)	CRHBP (ENSGEVG00005017082)	S100Z (ENSGEVG00005017053)	F2RL1 (ENSGEVG00005017035)	F2R (ENSGEVG00005017019)	F2RL2 (ENSGEVG00005017004)	IQGAP2 (ENSGEVG00005004397)	ENSGEVG00005002861	SV2C (ENSGEVG00005002796)	ENSGEVG00005002779	ANKDD1B (ENSGEVG00005002744)	POLK (ENSGEVG00005002673)	CERT1 (ENSGEVG00005002596)
Archosauria	ANCESTRAL SPECIES	1	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00910000147370	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Australian saltwater crocodile	MODERN SPECIES	29	CENPH (ENSCPRG00005017297)	CDK7 (ENSCPRG00005017305)	SERINC5 (ENSCPRG00005017311)	ENSCPRG00005017314	MTX3 (ENSCPRG00005017318)	TENT2 (ENSCPRG00005017326)	HOMER1 (ENSCPRG00005017334)	JMY (ENSCPRG00005017344) #7	ENSCPRG00005017356 #8	DMGDH (ENSCPRG00005017362) #10	ARSB (ENSCPRG00005017367) #11	LHFPL2 (ENSCPRG00005017371) #13	SCAMP1 (ENSCPRG00005017372) #14	AP3B1 (ENSCPRG00005017376) #17	TBCA (ENSCPRG00005017393) #21	OTP (ENSCPRG00005017395) #22	WDR41 (ENSCPRG00005017397)	PDE8B (ENSCPRG00005017420)	AGGF1 (ENSCPRG00005017448)	CRHBP (ENSCPRG00005017451)	S100Z (ENSCPRG00005017455)	F2RL1 (ENSCPRG00005000107)	F2R (ENSCPRG00005000123)	IQGAP2 (ENSCPRG00005000163)	F2RL2 (ENSCPRG00005000293)	ENSCPRG00005000328	SV2C (ENSCPRG00005000334)	ENSCPRG00005000401	ENSCPRG00005000416	ENSCPRG00005000427	ANKDD1B (ENSCPRG00005000445)
Aves	ANCESTRAL SPECIES	4	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00390000003312
Neognathae	ANCESTRAL SPECIES	12	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00960000190052	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.a.a #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00390000003312
Galloanserae	ANCESTRAL SPECIES	11	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00960000190052	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.a.a #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00390000003312
Anatidae	ANCESTRAL SPECIES	20	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00960000190052	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.a.a #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00960000189505	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Pink-footed goose	MODERN SPECIES	279												LHFPL2 (ENSABRG00000001485) #13	ENSABRG00000001519 #14	AP3B1 (ENSABRG00000001598) #17	TBCA (ENSABRG00000001646) #21	OTP (ENSABRG00000001662) #22	WDR41 (ENSABRG00000001685)	PDE8B (ENSABRG00000001793)	ENSABRG00000002108
Duck	MODERN SPECIES	3160																ENSAPLG00000024835 #22
Phasianidae	ANCESTRAL SPECIES	5	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00960000190052	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.a.a #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT01070000257240	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Phasianidae_b	ANCESTRAL SPECIES	5	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.a.a #14	ENSGT00940000157603 #17	ENSGT00940000170540	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT01070000257240	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Chicken	MODERN SPECIES	131	THBS4 (ENSGALG00010010122)	MTX3 (ENSGALG00010011559)	ENSGALG00010012414	TENT2 (ENSGALG00010012439)	ENSGALG00010012453	ENSGALG00010012457	HOMER1 (ENSGALG00010012521)	JMY (ENSGALG00010012535) #7	ENSGALG00010012555 #8	DMGDH (ENSGALG00010012599) #10	ARSB (ENSGALG00010013306) #11	LHFPL2 (ENSGALG00010012614) #13	SCAMP1 (ENSGALG00010012667) #14	AP3B1 (ENSGALG00010012751) #17	TBCA (ENSGALG00010012795)	OTP (ENSGALG00010011364) #22	WDR41 (ENSGALG00010010254)	PDE8B (ENSGALG00010010275)	AGGF1 (ENSGALG00010010457)	CRHBP (ENSGALG00010011451)	S100Z (ENSGALG00010011454)	F2RL1 (ENSGALG00010010599)	IQGAP2 (ENSGALG00010010688)	F2RL2 (ENSGALG00010010783)	ENSGALG00010011395	SV2C (ENSGALG00010011403)	ENSGALG00010010951	ANKDD1B (ENSGALG00010010962)	POLK (ENSGALG00010010980)	CERT1 (ENSGALG00010010985)	MED18 (ENSGALG00010010990)
Japanese quail	MODERN SPECIES	699	SERINC5 (ENSCJPG00005008033)	ENSCJPG00005008032	MTX3 (ENSCJPG00005008011)	ENSCJPG00005008010	TENT2 (ENSCJPG00005008009)	ENSCJPG00005008008	HOMER1 (ENSCJPG00005008006)	JMY (ENSCJPG00005007986) #7	ENSCJPG00005007985 #8	DMGDH (ENSCJPG00005007984) #10	ARSB (ENSCJPG00005007983) #11	LHFPL2 (ENSCJPG00005007982) #13	SCAMP1 (ENSCJPG00005007980) #14	AP3B1 (ENSCJPG00005007978) #17	TBCA (ENSCJPG00005007972) #21	OTP (ENSCJPG00005007969) #22	WDR41 (ENSCJPG00005007966)	PDE8B (ENSCJPG00005007937)	AGGF1 (ENSCJPG00005007934)	CRHBP (ENSCJPG00005007931)	S100Z (ENSCJPG00005007930)	F2RL1 (ENSCJPG00005007928)	ENSCJPG00005007926	RPL37 (ENSCJPG00005007923)	PRKAA1 (ENSCJPG00005007921)	TTC33 (ENSCJPG00005007920)	PTGER4 (ENSCJPG00005007909)	ENSCJPG00005007873	ENSCJPG00005007870	FYB1 (ENSCJPG00005007860)	RICTOR (ENSCJPG00005007227)
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00960000190052	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.a.a #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b.l.a	ENSGT00390000003312
Neognathae_c	ANCESTRAL SPECIES	2	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00960000190052	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.b #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b.l.a	ENSGT00390000003312
Golden eagle	MODERN SPECIES	91	SERINC5 (ENSACCG00020012605)	ENSACCG00020012198	MTX3 (ENSACCG00020011422)	ENSACCG00020011386	TENT2 (ENSACCG00020011342)	ENSACCG00020011331	HOMER1 (ENSACCG00020011321)	JMY (ENSACCG00020011307) #7	ENSACCG00020011296 #8	DMGDH (ENSACCG00020011281) #10	ARSB (ENSACCG00020011260) #11	LHFPL2 (ENSACCG00020011242) #13	SCAMP1 (ENSACCG00020011232) #14	AP3B1 (ENSACCG00020011192) #17	TBCA (ENSACCG00020011162) #21	OTP (ENSACCG00020011154) #22	WDR41 (ENSACCG00020011137)	PDE8B (ENSACCG00020011101)	AGGF1 (ENSACCG00020011059)	CRHBP (ENSACCG00020011040)	S100Z (ENSACCG00020011028)	F2RL1 (ENSACCG00020011018)	F2R (ENSACCG00020011014)	F2RL2 (ENSACCG00020011007)	IQGAP2 (ENSACCG00020010944)	SV2C (ENSACCG00020010876)	ENSACCG00020010857	ANKDD1B (ENSACCG00020010842)	POLK (ENSACCG00020010794)	CERT1 (ENSACCG00020010683)	MED18 (ENSACCG00020010650)
Kakapo	MODERN SPECIES	19	ENSSHBG00005013810	MTX3 (ENSSHBG00005013284)	ENSSHBG00005013277	ENSSHBG00005012389	ENSSHBG00005012296	ENSSHBG00005012280	ENSSHBG00005012268	ENSSHBG00005012252 #7	ENSSHBG00005012228 #8	DMGDH (ENSSHBG00005012214) #10	ARSB (ENSSHBG00005012188) #11	LHFPL2 (ENSSHBG00005012173) #13	SCAMP1 (ENSSHBG00005012135) #14	AP3B1 (ENSSHBG00005011362) #17	TBCA (ENSSHBG00005011141) #21	OTP (ENSSHBG00005011114) #22	WDR41 (ENSSHBG00005011087)	PDE8B (ENSSHBG00005010892)	AGGF1 (ENSSHBG00005010807)	CRHBP (ENSSHBG00005010788)	S100Z (ENSSHBG00005010751)	F2RL1 (ENSSHBG00005010738)	F2R (ENSSHBG00005010723)	F2RL2 (ENSSHBG00005010691)	IQGAP2 (ENSSHBG00005010448)	SV2C (ENSSHBG00005010367)	ENSSHBG00005010286	ANKDD1B (ENSSHBG00005010251)	POLK (ENSSHBG00005010150)	ENSSHBG00005010064	MED18 (ENSSHBG00005000150)
Passeriformes	ANCESTRAL SPECIES	7	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.a.a #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b.l.a	ENSGT00390000003312
Passeriformes_d	ANCESTRAL SPECIES	6	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.a.a #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000170540	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b.l.a	ENSGT00390000003312
Passeriformes_g	ANCESTRAL SPECIES	7	ENSGT01030000234623.a.b.a	ENSGT00940000167074	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.a.a #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000170540	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.b	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b.l.a	ENSGT00390000003312
Passeroidea	ANCESTRAL SPECIES	23													ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000170540	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b.l.a	ENSGT00390000003312
Zebra finch	MODERN SPECIES	104	ARSB (ENSTGUG00000003818) #11	DMGDH (ENSTGUG00000003802) #10	ENSTGUG00000003783 #8	JMY (ENSTGUG00000003723) #7	HOMER1 (ENSTGUG00000003711)	TENT2 (ENSTGUG00000003674)	CMYA5 (ENSTGUG00000028894)	MTX3 (ENSTGUG00000003611)	ENSTGUG00000003565	SERINC5 (ENSTGUG00000003543)	ENSTGUG00000020535	GCNT1 (ENSTGUG00000003503)	TBCA (ENSTGUG00000003968)	RFK (ENSTGUG00000024019)	ENSTGUG00000020870	OTP (ENSTGUG00000024121) #22	WDR41 (ENSTGUG00000003972)	PDE8B (ENSTGUG00000003995)	AGGF1 (ENSTGUG00000004021)	CRHBP (ENSTGUG00000004054)	ENSTGUG00000004076	IQGAP2 (ENSTGUG00000004085)	F2RL2 (ENSTGUG00000004113)	SV2C (ENSTGUG00000004114)	ENSTGUG00000024790	POLK (ENSTGUG00000006177)	CERT1 (ENSTGUG00000006135)	MED18 (ENSTGUG00000006132)	HMGCR (ENSTGUG00000006083)	ENSTGUG00000006074	GCNT4 (ENSTGUG00000006072)
Great tit	MODERN SPECIES	642	CDK7 (ENSPMJG00000016127)	SERINC5 (ENSPMJG00000016128)	ENSPMJG00000016129	MTX3 (ENSPMJG00000016130)	ENSPMJG00000016131	TENT2 (ENSPMJG00000016132)	HOMER1 (ENSPMJG00000016133)	JMY (ENSPMJG00000016134) #7	ENSPMJG00000016135 #8	DMGDH (ENSPMJG00000016136) #10	ARSB (ENSPMJG00000016137) #11	LHFPL2 (ENSPMJG00000016138) #13	SCAMP1 (ENSPMJG00000016139) #14	AP3B1 (ENSPMJG00000016140) #17	TBCA (ENSPMJG00000016141) #21	OTP (ENSPMJG00000016142) #22	WDR41 (ENSPMJG00000016143)	AGGF1 (ENSPMJG00000016144)	PDE8B (ENSPMJG00000016145)	CRHBP (ENSPMJG00000016147)	S100Z (ENSPMJG00000016148)	F2RL1 (ENSPMJG00000016149)	F2R (ENSPMJG00000016150)	IQGAP2 (ENSPMJG00000016151)	F2RL2 (ENSPMJG00000016152)	SV2C (ENSPMJG00000016153)	ENSPMJG00000016154	POLK (ENSPMJG00000016155)	ENSPMJG00000016156	CERT1 (ENSPMJG00000016157)	MED18 (ENSPMJG00000016158)
Anura	ANCESTRAL SPECIES	9	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT01100000264050	ENSGT00730000111121	ENSGT00390000001362	ENSGT00940000161125	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT01050000244840.A.b.b	ENSGT00950000183076.b	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b
Frog	MODERN SPECIES		serinc5 (ENSXETG00000000484)	thbs4 (ENSXETG00000000500)	mtx3 (ENSXETG00000000510)	ENSXETG00000040327	tent2 (ENSXETG00000000518)	homer1 (ENSXETG00000000519)	jmy (ENSXETG00000000520) #7	ENSXETG00000046595	bhmt (ENSXETG00000000523) #8	dmgdh (ENSXETG00000000527) #10	arsb (ENSXETG00000045303) #11	lhfpl2 (ENSXETG00000044028) #13	scamp1 (ENSXETG00000000547) #14	ap3b1 (ENSXETG00000030391) #17	tbca (ENSXETG00000016574) #21	otp (ENSXETG00000035719) #22	wdr41 (ENSXETG00000017074)	pde8b (ENSXETG00000017075)	aggf1 (ENSXETG00000017077)	ENSXETG00000047318	s100z (ENSXETG00000017078)	crhbp (ENSXETG00000017080)	ENSXETG00000043113	f2rl1 (ENSXETG00000001420)	ENSXETG00000042651	f2r (ENSXETG00000003338)	f2rl2 (ENSXETG00000003340)	iqgap2 (ENSXETG00000003339)	sv2c (ENSXETG00000030792)	poc5 (ENSXETG00000003349)	ankdd1b (ENSXETG00000032144)
Leishan spiny toad	MODERN SPECIES		TENT2 (ENSLLEG00000013728)	HOMER1 (ENSLLEG00000013917)	JMY (ENSLLEG00000014168) #7	DMGDH (ENSLLEG00000014286) #10	ENSLLEG00000015178 #8	ENSLLEG00000016254	ARSB (ENSLLEG00000016283) #11	ENSLLEG00000016417	LHFPL2 (ENSLLEG00000016448) #13	ENSLLEG00000016488	SCAMP1 (ENSLLEG00000016533) #14	ENSLLEG00000016758	AP3B1 (ENSLLEG00000016817) #17	ENSLLEG00000017928	TBCA (ENSLLEG00000017966) #21	OTP (ENSLLEG00000018020) #22	WDR41 (ENSLLEG00000018088)	PDE8B (ENSLLEG00000018182)	ENSLLEG00000018804	ENSLLEG00000018821	ENSLLEG00000018871	AGGF1 (ENSLLEG00000018958)	CRHBP (ENSLLEG00000019109)	ENSLLEG00000019291	S100Z (ENSLLEG00000019309)	ENSLLEG00000019355	ENSLLEG00000019437	ENSLLEG00000019525	ENSLLEG00000019542	ENSLLEG00000019606	ENSLLEG00000019700
Coelacanth	MODERN SPECIES	354											ARSB (ENSLACG00000017542) #11	LHFPL2 (ENSLACG00000017142) #13	SCAMP1 (ENSLACG00000016971) #14	AP3B1 (ENSLACG00000016462) #17	TBCA (ENSLACG00000015660) #21	OTP (ENSLACG00000015564) #22	WDR41 (ENSLACG00000014972)	PDE8B (ENSLACG00000014400)	AGGF1 (ENSLACG00000012448)	CRHBP (ENSLACG00000011704)	S100Z (ENSLACG00000011069)	ENSLACG00000010563	ENSLACG00000022473	ENSLACG00000022384	F2R (ENSLACG00000009553)	F2RL2 (ENSLACG00000008066)	ENSLACG00000007149	SV2C (ENSLACG00000000841)
Actinopterygii	ANCESTRAL SPECIES	45	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b	ENSGT00940000174521	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667
Reedfish	MODERN SPECIES	15	ENSECRG00000006131	serinc5 (ENSECRG00000006119)	ENSECRG00000006108	thbs4b (ENSECRG00000005410)	mtx3 (ENSECRG00000005326)	tent2 (ENSECRG00000005304)	homer1b (ENSECRG00000005272)	JMY (ENSECRG00000005242) #7	bhmt (ENSECRG00000005095) #8	DMGDH (ENSECRG00000005056) #10	ARSB (ENSECRG00000005042) #11	lhfpl2a (ENSECRG00000005036) #13	scamp1 (ENSECRG00000005024) #14	AP3B1 (ENSECRG00000005004) #17	tbca (ENSECRG00000004988) #21	otpa (ENSECRG00000004985) #22	wdr41 (ENSECRG00000004971)	PDE8B (ENSECRG00000004936)	aggf1 (ENSECRG00000004908)	crhbp (ENSECRG00000004895)	s100z (ENSECRG00000004884)	ENSECRG00000004877	ch25hl2 (ENSECRG00000004872)	f2rl1.1 (ENSECRG00000004864)	f2r2.1 (ENSECRG00000004853)	F2RL2 (ENSECRG00000004843)	iqgap2 (ENSECRG00000016760)	sv2ca (ENSECRG00000016710)	ENSECRG00000016694	ENSECRG00000016683	ENSECRG00000016654
Neopterygii	ANCESTRAL SPECIES	26	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000155227	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122 #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952 #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b	ENSGT00940000174521	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A	ENSGT00940000156667
Spotted gar	MODERN SPECIES	658	cdk7 (ENSLOCG00000006117)	serinc5 (ENSLOCG00000006068)	thbs4b (ENSLOCG00000006036)	mtx3 (ENSLOCG00000006008)	cmya5 (ENSLOCG00000005987)	tent2 (ENSLOCG00000005954)	homer1b (ENSLOCG00000005916)	JMY (ENSLOCG00000005899) #7	bhmt (ENSLOCG00000005877) #8	DMGDH (ENSLOCG00000005858) #10	ARSB (ENSLOCG00000005844) #11	lhfpl2a (ENSLOCG00000005821) #13	scamp1 (ENSLOCG00000005808) #14	AP3B1 (ENSLOCG00000005786) #17	tbca (ENSLOCG00000005775) #21	otpa (ENSLOCG00000005761) #22	wdr41 (ENSLOCG00000005746)	PDE8B (ENSLOCG00000005705)	aggf1 (ENSLOCG00000005688)	crhbp (ENSLOCG00000005670)	s100z (ENSLOCG00000005654)	ENSLOCG00000005613	ch25hl2 (ENSLOCG00000017529)	F2RL1 (ENSLOCG00000005593)	F2RL1 (ENSLOCG00000005575)	F2R (ENSLOCG00000017528)	F2R (ENSLOCG00000017527)	F2R (ENSLOCG00000017526)	F2RL2 (ENSLOCG00000017525)	iqgap2 (ENSLOCG00000005540)	sv2ca (ENSLOCG00000005520)
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000159952.a.a #22
Clupeocephala	ANCESTRAL SPECIES	169	ENSGT01090000260661	ENSGT00940000162653	ENSGT00940000157902	ENSGT00390000018729.a.e	ENSGT00940000158784	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000155227.b	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d #7	ENSGT00390000003122.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT00940000161008.e
Otomorpha	ANCESTRAL SPECIES	33	ENSGT00390000003255	ENSGT00950000183112.b.a.b	ENSGT01090000260661	ENSGT00940000162653	ENSGT00940000157902	ENSGT00390000018729.a.e	ENSGT00940000158784	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000155227.b	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00990000203589.b.a ##13	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000155679.c	ENSGT00550000074949
Clupeiformes	ANCESTRAL SPECIES	12	ENSGT00390000002955	ENSGT00390000000375	ENSGT00940000154396.a	ENSGT00940000155640.b	ENSGT00940000159243	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00950000182772.B.a.a	ENSGT00940000155679.d	ENSGT00390000012355.A.a.a.b	ENSGT00940000154290.b	ENSGT00940000155771.c	ENSGT00730000110989.c.a	ENSGT00530000063672.b	ENSGT00550000074946	ENSGT00390000015164	ENSGT00940000158323.g	ENSGT00940000166967	ENSGT00390000010474	ENSGT00940000164321.d	ENSGT00730000111133.`b
Denticle herring	MODERN SPECIES	2	rgmb (ENSDCDG00000016577)	erap2 (ENSDCDG00000016630)	lnpep (ENSDCDG00000016984)	slc14a2 (ENSDCDG00000017377)	SETBP1 (ENSDCDG00000017976)	cdk7 (ENSDCDG00000018040)	serinc5 (ENSDCDG00000018088)	thbs4a (ENSDCDG00000018205)	mtx3 (ENSDCDG00000019311)	cmya5 (ENSDCDG00000019315)	tent2 (ENSDCDG00000019327)	homer1b (ENSDCDG00000019346)	ENSDCDG00000019400 #8	lhfpl2b (ENSDCDG00000019410) ##13	lonp2 (ENSDCDG00000019429)	otpb (ENSDCDG00000019521) #22	ENSDCDG00000019531	ckmt2b (ENSDCDG00000019545)	rasgrf2b (ENSDCDG00000019736)	msh3 (ENSDCDG00000022015)	MYORG (ENSDCDG00000022682)	mamdc2a (ENSDCDG00000022701)	ptar1 (ENSDCDG00000022744)	APBA1 (ENSDCDG00000022754)	ENTREP1 (ENSDCDG00000023329)	tjp2b (ENSDCDG00000023358)	fxn (ENSDCDG00000023387)	pip5k1bb (ENSDCDG00000023395)	unc45b (ENSDCDG00000023465)	kif2a (ENSDCDG00000026300)	mier3b (ENSDCDG00000027021)
Atlantic herring	MODERN SPECIES	23	epg5 (ENSCHAG00000020254)	lix1 (ENSCHAG00000021068)	riok2 (ENSCHAG00000021077)	ENSCHAG00000021186	ENSCHAG00000021202	slc14a2 (ENSCHAG00000021211)	SETBP1 (ENSCHAG00000021253)	mtx3 (ENSCHAG00000021271)	thbs4a (ENSCHAG00000021328)	serinc5 (ENSCHAG00000023325)	cdk7 (ENSCHAG00000023401)	homer1b (ENSCHAG00000023423)	ENSCHAG00000023447 #8	ENSCHAG00000023471 #8	lhfpl2a (ENSCHAG00000023502) #13	otpb (ENSCHAG00000023505) #22	crhbp (ENSCHAG00000023516)	ckmt2b (ENSCHAG00000023532)	rasgrf2b (ENSCHAG00000023839)	msh3 (ENSCHAG00000024088)	MYORG (ENSCHAG00000024376)	mamdc2a (ENSCHAG00000024383)	CFAP95 (ENSCHAG00000024428)	ptar1 (ENSCHAG00000024431)	APBA1 (ENSCHAG00000024443)	ENTREP1 (ENSCHAG00000024502)	ENSCHAG00000024618	fxn (ENSCHAG00000026075)	pip5k1bb (ENSCHAG00000026085)	unc45b (ENSCHAG00000026166)	ENSCHAG00000026539
Otophysi	ANCESTRAL SPECIES	24	ENSGT00940000161008.e	ENSGT00950000183112.b.a.b	ENSGT01090000260661	ENSGT00940000162653	ENSGT00940000157902	ENSGT00390000018729.a.e	ENSGT00940000158784	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000155227.b	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00990000203589.b.a ##13	ENSGT00940000159952.a.a #22	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT00390000014658	ENSGT00390000000560	ENSGT00940000160404	ENSGT00940000160570	ENSGT00940000153246.b	ENSGT00940000158049	ENSGT00510000048902.a.e	ENSGT00940000159721.g	ENSGT00940000154742.b	ENSGT00940000155305.a	ENSGT00940000155123.a	ENSGT00940000158982	ENSGT00390000018619
Characiphysae	ANCESTRAL SPECIES	14	ENSGT00940000161008.e	ENSGT00950000183112.b.a.b	ENSGT01090000260661	ENSGT00940000162653	ENSGT00940000157902	ENSGT00390000018729.a.e	ENSGT00940000158784	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000155227.b	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00990000203589.b.a ##13	ENSGT00940000159952.a.a #22	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT00390000014658	ENSGT00390000000560	ENSGT00940000160404	ENSGT00940000160570	ENSGT00940000153246.b	ENSGT00940000158049	ENSGT00510000048902.a.e	ENSGT00940000159721.g	ENSGT00940000154742.b	ENSGT00940000155305.a	ENSGT00940000155123.a	ENSGT00940000158982	ENSGT00390000018619
Channel catfish	MODERN SPECIES	14	RGMB (ENSIPUG00000019754)	erap2 (ENSIPUG00000019681)	LNPEP (ENSIPUG00000019658)	slc14a2 (ENSIPUG00000019611)	slc14a2 (ENSIPUG00000019539)	SETBP1 (ENSIPUG00000019523)	cdk7 (ENSIPUG00000019436)	ENSIPUG00000019423	serinc5 (ENSIPUG00000019413)	thbs4 (ENSIPUG00000019257)	mtx3 (ENSIPUG00000019217)	cmya5 (ENSIPUG00000019194)	papd4 (ENSIPUG00000019140)	HOMER1 (ENSIPUG00000019109)	lhfpl2 (ENSIPUG00000019095) ##13	otpb (ENSIPUG00000019087) #22	ENSIPUG00000019078	ckmt2b (ENSIPUG00000018972)	ENSIPUG00000018939	rasgrf2 (ENSIPUG00000018821)	msh3 (ENSIPUG00000018762)	ubac1 (ENSIPUG00000018730)	ENSIPUG00000018724	entr1 (ENSIPUG00000018714)	snapc4 (ENSIPUG00000018664)	CARD9 (ENSIPUG00000018621)	ccdc180 (ENSIPUG00000018567)	pomt1 (ENSIPUG00000018457)	ENSIPUG00000018447	ENSIPUG00000018419	gcnt4a (ENSIPUG00000018412)
Characiphysae_b	ANCESTRAL SPECIES	12	ENSGT00940000161008.e	ENSGT00950000183112.b.a.b	ENSGT01090000260661	ENSGT00940000162653	ENSGT00940000157902	ENSGT00390000018729.a.e	ENSGT00940000158784	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000155227.b	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00990000203589.b.a ##13	ENSGT00940000159952.a.a #22	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT00390000014658	ENSGT00390000000560	ENSGT00940000160404	ENSGT00940000160570	ENSGT00940000153246.b	ENSGT00940000158049	ENSGT00510000048902.a.e	ENSGT00940000159721.g	ENSGT00940000154742.b	ENSGT00940000155305.a	ENSGT00940000155123.a	ENSGT00940000158982	ENSGT00390000018619
Characoidei	ANCESTRAL SPECIES	10	ENSGT00940000161008.e	ENSGT00950000183112.b.a.b	ENSGT01090000260661	ENSGT00940000162653	ENSGT00940000157902	ENSGT00390000018729.a.e	ENSGT00940000158784	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000155227.b	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00990000203589.b.a ##13	ENSGT00940000159952.a.a #22	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT00390000014658	ENSGT00390000000560	ENSGT00940000160404	ENSGT00940000160570	ENSGT00940000153246.b	ENSGT00940000158049	ENSGT00510000048902.a.e	ENSGT00940000159721.g	ENSGT00940000154742.b	ENSGT00940000155305.a	ENSGT00940000155123.a	ENSGT00940000158982	ENSGT00390000018619
Mexicana tetra	MODERN SPECIES	26	ENSAMXG00000041008	ENSAMXG00000043723	rgmb (ENSAMXG00000008527)	erap2 (ENSAMXG00000008517)	lnpep (ENSAMXG00000008503)	slc14a2 (ENSAMXG00000008491)	SETBP1 (ENSAMXG00000008471)	cdk7 (ENSAMXG00000008454)	serinc5 (ENSAMXG00000008404)	thbs4a (ENSAMXG00000008326)	mtx3 (ENSAMXG00000036302)	cmya5 (ENSAMXG00000038906)	tent2 (ENSAMXG00000008240)	homer1b (ENSAMXG00000008210)	lhfpl2b (ENSAMXG00000038967) ##13	otpb (ENSAMXG00000032072) #22	ckmt2b (ENSAMXG00000008159)	rasgrf2b (ENSAMXG00000008134)	msh3 (ENSAMXG00000008122)	ubac1 (ENSAMXG00000008111)	entr1 (ENSAMXG00000035103)	snapc4 (ENSAMXG00000008074)	CARD9 (ENSAMXG00000008047)	ENSAMXG00000041161	pomt1 (ENSAMXG00000007997)	ENSAMXG00000031093	gcnt4a (ENSAMXG00000025868)	ENSAMXG00000030426	hmgcra (ENSAMXG00000007971)	cert1a (ENSAMXG00000007931)	arsk (ENSAMXG00000007903)
Red-bellied piranha	MODERN SPECIES	17	MYORG (ENSPNAG00000029430)	rgmb (ENSPNAG00000029414)	ENSPNAG00000029370	erap2 (ENSPNAG00000004748)	lnpep (ENSPNAG00000029341)	slc14a2 (ENSPNAG00000005698)	SETBP1 (ENSPNAG00000004549)	cdk7 (ENSPNAG00000029255)	serinc5 (ENSPNAG00000006628)	thbs4a (ENSPNAG00000004896)	mtx3 (ENSPNAG00000029051)	cmya5 (ENSPNAG00000006794)	tent2 (ENSPNAG00000006395)	homer1b (ENSPNAG00000028940)	lhfpl2b (ENSPNAG00000006173) ##13	otpb (ENSPNAG00000028823) #22	ckmt2b (ENSPNAG00000006567)	rasgrf2b (ENSPNAG00000004417)	msh3 (ENSPNAG00000006495)	ubac1 (ENSPNAG00000005048)	entr1 (ENSPNAG00000028516)	ENSPNAG00000028482	CARD9 (ENSPNAG00000028461)	ENSPNAG00000028384	pomt1 (ENSPNAG00000028333)	ENSPNAG00000028255	gcnt4a (ENSPNAG00000004329)	ankrd31 (ENSPNAG00000004792)	hmgcra (ENSPNAG00000028218)	cert1a (ENSPNAG00000028148)	arsk (ENSPNAG00000006490)
Electric eel	MODERN SPECIES	96	mamdc2a (ENSEEEG00000013017)	MYORG (ENSEEEG00000013021)	rgmb (ENSEEEG00000013024)	erap2 (ENSEEEG00000013049)	lnpep (ENSEEEG00000013293)	slc14a2 (ENSEEEG00000013327)	SETBP1 (ENSEEEG00000013351)	cdk7 (ENSEEEG00000013356)	serinc5 (ENSEEEG00000013377)	thbs4a (ENSEEEG00000013386)	mtx3 (ENSEEEG00000013390)	cmya5 (ENSEEEG00000013394)	tent2 (ENSEEEG00000013409)	homer1b (ENSEEEG00000013546)	lhfpl2b (ENSEEEG00000013547) ##13	otpb (ENSEEEG00000013548) #22	ckmt2b (ENSEEEG00000013556)	rasgrf2b (ENSEEEG00000013702)	msh3 (ENSEEEG00000013708)	ubac1 (ENSEEEG00000013719)	ENSEEEG00000013723	snapc4 (ENSEEEG00000013724)	CARD9 (ENSEEEG00000013725)	ENSEEEG00000013726	pomt1 (ENSEEEG00000013730)	ENSEEEG00000013734	fam169aa (ENSEEEG00000013736)	gcnt4a (ENSEEEG00000013737)	ankrd31 (ENSEEEG00000013738)	hmgcra (ENSEEEG00000013740)	cert1a (ENSEEEG00000013783)
Cyprinoidei	ANCESTRAL SPECIES	43	ENSGT00940000161008.e	ENSGT00950000183112.b.a.b	ENSGT01090000260661	ENSGT00940000162653	ENSGT00940000157902	ENSGT00390000018729.a.e	ENSGT00940000158784	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000155227.b	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00990000203589.b.a ##13	ENSGT00940000159952.a.a #22	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT00390000014658	ENSGT00390000000560	ENSGT00940000160404	ENSGT00940000160570	ENSGT00940000153246.b	ENSGT00940000158049	ENSGT00510000048902.a.e	ENSGT00940000159721.g	ENSGT00940000154742.b	ENSGT00940000155305.a	ENSGT00940000155123.a	ENSGT00940000158982	ENSGT00390000018619
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	516	ENSGT00940000156117.e.a.a	ENSGT00940000161008.e.d	ENSGT00950000183112.b.a.b.h	ENSGT00940000162653.c.a	ENSGT00940000157902.f	ENSGT00390000018729.a.e	ENSGT00940000158784.m	ENSGT00940000155179.p	ENSGT01030000234623.a.b.a.h	ENSGT00940000155227.b.a	ENSGT00950000182919.B.b.d	ENSGT00940000159696.a	ENSGT00940000156640.d	ENSGT00940000156354.o.a	ENSGT00990000203589.b.a.a ##13	ENSGT00940000159952.a.a.a #22	ENSGT00940000155679.c.n	ENSGT00550000074949.i	ENSGT00390000014658.i
Goldfish	MODERN SPECIES	44	ptar1 (ENSCARG00000024146)	mamdc2a (ENSCARG00000024018)	rgmb (ENSCARG00000024000)	erap2 (ENSCARG00000023837)	lnpep (ENSCARG00000022991)	slc14a2 (ENSCARG00000022903)	SETBP1 (ENSCARG00000022895)	cdk7 (ENSCARG00000022870)	serinc5 (ENSCARG00000022832)	thbs4a (ENSCARG00000020746)	mtx3 (ENSCARG00000020600)	tent2 (ENSCARG00000020578)	homer1b (ENSCARG00000020404)	lhfpl2b (ENSCARG00000020383) ##13	ENSCARG00000020375	otpb (ENSCARG00000020358) #22	rasgrf2b (ENSCARG00000020171)	ENSCARG00000020132	ubac1 (ENSCARG00000020087)	CARD9 (ENSCARG00000020060)	pomt1 (ENSCARG00000018150)	gcnt4a (ENSCARG00000018059)	ankrd31 (ENSCARG00000018048)	hmgcra (ENSCARG00000017999)	ENSCARG00000017983	ENSCARG00000017650	TECTA (ENSCARG00000017275)	TBCEL (ENSCARG00000017227)	ttf1.1 (ENSCARG00000017165)	gsnb (ENSCARG00000016069)	rab14 (ENSCARG00000015972)
Cyprininae_a	ANCESTRAL SPECIES	275	ENSGT00940000161008.e.d	ENSGT00950000183112.b.a.b.h	ENSGT00940000162653.d	ENSGT00940000162653.c.a	ENSGT00940000157902.f	ENSGT00390000018729.a.e	ENSGT00940000158784.m	ENSGT00940000155179.p	ENSGT01030000234623.a.b.a.h	ENSGT00940000155227.b.a	ENSGT00950000182919.B.b.d	ENSGT00940000159696.a	ENSGT00940000156640.d	ENSGT00940000156354.o.a	ENSGT00990000203589.b.a.a ##13	ENSGT00940000159952.a.a.a #22	ENSGT00940000155679.c.n	ENSGT00550000074949.i	ENSGT00390000014658.i	ENSGT00390000000560	ENSGT00940000160404.c.a	ENSGT00940000160570.m	ENSGT00940000158049.d	ENSGT00510000048902.a.e.b	ENSGT00940000159721.g.a	ENSGT00940000154742.b.d	ENSGT00940000155305.a.a	ENSGT00940000155123.a.b
Common carp reference	MODERN SPECIES	7	rgmb (ENSCCRG00000072341)	ENSCCRG00000030368	erap2 (ENSCCRG00000033643)	lnpep (ENSCCRG00000073000)	slc14a2 (ENSCCRG00000060498)	slc14a2 (ENSCCRG00000039720)	ENSCCRG00000075442	cdk7 (ENSCCRG00000075825)	serinc5 (ENSCCRG00000032306)	thbs4a (ENSCCRG00000032293)	mtx3 (ENSCCRG00000032287)	cmya5 (ENSCCRG00000035435)	tent2 (ENSCCRG00000035439)	homer1b (ENSCCRG00000035448)	lhfpl2b (ENSCCRG00000035451) ##13	otpb (ENSCCRG00000035453) #22	rasgrf2b (ENSCCRG00000035501)	msh3 (ENSCCRG00000068583)	ubac1 (ENSCCRG00000061415)	entr1 (ENSCCRG00000079868)	snapc4 (ENSCCRG00000031649)	CARD9 (ENSCCRG00000031628)	pomt1 (ENSCCRG00000053580)	fam169aa (ENSCCRG00000030438)	gcnt4a (ENSCCRG00000063024)	ankrd31 (ENSCCRG00000030426)	hmgcra (ENSCCRG00000031146)	cert1a (ENSCCRG00000031135)	SKIC3 (ENSCCRG00000029790)	FAM81B (ENSCCRG00000041802)	ENSCCRG00000059248
Golden-line barbel	MODERN SPECIES	534		mamdc2a (ENSSGRG00000022864)	MYORG (ENSSGRG00000022863)	rgmb (ENSSGRG00000022861)	erap2 (ENSSGRG00000022820)	lnpep (ENSSGRG00000022813)	slc14a2 (ENSSGRG00000022812)	SETBP1 (ENSSGRG00000022811)	cdk7 (ENSSGRG00000022810)	serinc5 (ENSSGRG00000022809)	thbs4a (ENSSGRG00000022728)	cmya5 (ENSSGRG00000022709)	tent2 (ENSSGRG00000022651)	homer1b (ENSSGRG00000022634)	lhfpl2b (ENSSGRG00000022631) ##13	otpb (ENSSGRG00000022628) #22	ckmt2b (ENSSGRG00000022627)	rasgrf2b (ENSSGRG00000022237)	ENSSGRG00000022227	ubac1 (ENSSGRG00000022090)	entr1 (ENSSGRG00000022087)	snapc4 (ENSSGRG00000022081)	CARD9 (ENSSGRG00000022079)	zgc:194398 (ENSSGRG00000022078)	pomt1 (ENSSGRG00000021981)	gcnt4a (ENSSGRG00000021970)	ENSSGRG00000021969	ankrd31 (ENSSGRG00000021964)	hmgcra (ENSSGRG00000020504)	cert1a (ENSSGRG00000019264)	arsk (ENSSGRG00000019223)
Cyprininae	ANCESTRAL SPECIES	21	ENSGT00940000156117.e.a.b	ENSGT00940000161008.e.c	ENSGT00950000183112.b.a.b.g	ENSGT01090000260661	ENSGT00940000162653.c.b	ENSGT00940000157902.e	ENSGT00940000158784.n	ENSGT00940000155179.o	ENSGT01030000234623.a.b.a.g	ENSGT00940000155227.b.b	ENSGT00950000182919.B.b.c	ENSGT00940000159696.b	ENSGT00940000156640.c	ENSGT00940000156354.o.b	ENSGT00990000203589.b.a.b ##13	ENSGT00940000159952.a.a.b #22	ENSGT00950000182772.B.a.a.v	ENSGT00940000155679.c.m	ENSGT00550000074949.j	ENSGT00390000014658.h	ENSGT00390000000560	ENSGT00940000160404.c	ENSGT00940000160570.m	ENSGT00940000158049.d	ENSGT00510000048902.a.e.b	ENSGT00940000159721.g.a	ENSGT00940000154742.b.d	ENSGT00940000155305.a.a	ENSGT00940000155123.a.b
Cyprininae_a	ANCESTRAL SPECIES		ENSGT00940000156117.e.a.b	ENSGT00940000161008.e.c	ENSGT00950000183112.b.a.b.g	ENSGT01090000260661	ENSGT00940000162653.c.b	ENSGT00940000157902.e	ENSGT00940000158784.n	ENSGT00940000155179.o	ENSGT01030000234623.a.b.a.g	ENSGT00940000155227.b.b	ENSGT00950000182919.B.b.c	ENSGT00940000159696.b	ENSGT00940000156640.c	ENSGT00940000156354.o.b	ENSGT00990000203589.b.a.b ##13	ENSGT00940000159952.a.a.b #22	ENSGT00950000182772.B.a.a.v	ENSGT00940000155679.c.m	ENSGT00550000074949.j	ENSGT00390000014658.h	ENSGT00940000160404.c.b	ENSGT00940000160570.n	ENSGT00940000153246.b	ENSGT00940000158049.c	ENSGT00510000048902.a.e.a	ENSGT00940000159721.g.b	ENSGT00940000154742.b.c	ENSGT00940000155305.a.b	ENSGT00940000155123.a.a	ENSGT00940000158982	ENSGT00390000018619.m
Golden-line barbel	MODERN SPECIES	92	APBA1 (ENSSGRG00000018306)	ptar1 (ENSSGRG00000018322)	mamdc2a (ENSSGRG00000018327)	rgmb (ENSSGRG00000018328)	ENSSGRG00000018329	lnpep (ENSSGRG00000018341)	SETBP1 (ENSSGRG00000018404)	cdk7 (ENSSGRG00000018413)	serinc5 (ENSSGRG00000018653)	thbs4a (ENSSGRG00000018768)	mtx3 (ENSSGRG00000018842)	cmya5 (ENSSGRG00000018900)	tent2 (ENSSGRG00000018905)	homer1b (ENSSGRG00000019147)	lhfpl2b (ENSSGRG00000019150) ##13	otpb (ENSSGRG00000019154) #22	ckmt2b (ENSSGRG00000019158)	rasgrf2b (ENSSGRG00000019303)	msh3 (ENSSGRG00000020282)	ubac1 (ENSSGRG00000020343)	entr1 (ENSSGRG00000020344)	snapc4 (ENSSGRG00000020349)	CARD9 (ENSSGRG00000020350)	pomt1 (ENSSGRG00000020354)	ENSSGRG00000020356	gcnt4a (ENSSGRG00000020358)	ankrd31 (ENSSGRG00000020359)	hmgcra (ENSSGRG00000020371)	cert1a (ENSSGRG00000020993)	ENSSGRG00000021191	nol6 (ENSSGRG00000021193)
Common carp reference	MODERN SPECIES	15	mamdc2a (ENSCCRG00000037651)	ENSCCRG00000076524	rgmb (ENSCCRG00000054301)	ENSCCRG00000055078	erap2 (ENSCCRG00000030374)	lnpep (ENSCCRG00000033617)	ENSCCRG00000043063	cdk7 (ENSCCRG00000032487)	serinc5 (ENSCCRG00000066854)	thbs4a (ENSCCRG00000033545)	cmya5 (ENSCCRG00000059932)	mtx3 (ENSCCRG00000057339)	tent2 (ENSCCRG00000023884)	homer1b (ENSCCRG00000067618)	lhfpl2b (ENSCCRG00000030356) ##13	otpb (ENSCCRG00000042303) #22	ckmt2b (ENSCCRG00000042333)	rasgrf2b (ENSCCRG00000081778)	msh3 (ENSCCRG00000065142)	ubac1 (ENSCCRG00000078928)	snapc4 (ENSCCRG00000080322)	ENSCCRG00000031341	ENSCCRG00000060125	pomt1 (ENSCCRG00000054610)	ENSCCRG00000057955	ENSCCRG00000057397	hmgcra (ENSCCRG00000023887)	cert1a (ENSCCRG00000023916)	arsk (ENSCCRG00000024209)	nol6 (ENSCCRG00000024304)	SKIC3 (ENSCCRG00000028424)
Goldfish	MODERN SPECIES	23	mamdc2a (ENSCARG00000029450)	MYORG (ENSCARG00000029438)	rgmb (ENSCARG00000029419)	erap2 (ENSCARG00000029055)	lnpep (ENSCARG00000028489)	SETBP1 (ENSCARG00000028429)	cdk7 (ENSCARG00000028255)	ENSCARG00000028239	serinc5 (ENSCARG00000028222)	thbs4a (ENSCARG00000025660)	mtx3 (ENSCARG00000025456)	cmya5 (ENSCARG00000025439)	tent2 (ENSCARG00000025362)	homer1b (ENSCARG00000025319)	lhfpl2b (ENSCARG00000025299) ##13	otpb (ENSCARG00000025268) #22	ckmt2b (ENSCARG00000025138)	rasgrf2b (ENSCARG00000022224)	msh3 (ENSCARG00000020872)	ubac1 (ENSCARG00000020791)	ENSCARG00000020782	snapc4 (ENSCARG00000020703)	CARD9 (ENSCARG00000020667)	ENSCARG00000020649	pomt1 (ENSCARG00000019822)	ENSCARG00000019786	gcnt4a (ENSCARG00000019782)	ENSCARG00000019773	hmgcra (ENSCARG00000019498)	ENSCARG00000019451	nppc (ENSCARG00000019445)
Zebrafish	MODERN SPECIES	20	mamdc2a (ENSDARG00000098345)	MYORG (ENSDARG00000104260)	rgmb (ENSDARG00000079323)	erap2 (ENSDARG00000098618)	lnpep (ENSDARG00000100394)	slc14a2 (ENSDARG00000051914)	SETBP1 (ENSDARG00000093799)	cdk7 (ENSDARG00000051916)	serinc5 (ENSDARG00000008153)	thbs4a (ENSDARG00000102777)	mtx3 (ENSDARG00000090195)	cmya5 (ENSDARG00000061379)	tent2 (ENSDARG00000099679)	homer1b (ENSDARG00000101759)	lhfpl2b (ENSDARG00000098153) ##13	otpb (ENSDARG00000058379) #22	ckmt2b (ENSDARG00000039929)	ENSDARG00000104979	rasgrf2b (ENSDARG00000002816)	msh3 (ENSDARG00000063276)	ubac1 (ENSDARG00000059722)	entr1 (ENSDARG00000095515)	snapc4 (ENSDARG00000067673)	CARD9 (ENSDARG00000067672)	ENSDARG00000032372	pomt1 (ENSDARG00000067670)	zgc:194398 (ENSDARG00000078250)	fam169aa (ENSDARG00000059719)	gcnt4a (ENSDARG00000035198)	ankrd31 (ENSDARG00000052731)	hmgcra (ENSDARG00000052734)
Euteleosteomorpha	ANCESTRAL SPECIES	137	ENSGT00950000183112.b.a.b	ENSGT00940000162653	ENSGT00940000157902	ENSGT00390000018729.a.e	ENSGT00940000158784	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000155227.b	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00510000046704.b.a.d #7	ENSGT00390000003122.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000159952.a.a #22	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT00940000161008.e
Acanthomorphata	ANCESTRAL SPECIES	13	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a	ENSGT00950000182953.C.c	ENSGT00940000158546
Euacanthomorphacea	ANCESTRAL SPECIES	14	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a
Percomorphaceae	ANCESTRAL SPECIES	2	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01100000263649	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01100000263649	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965
Atherinomorphae	ANCESTRAL SPECIES	1	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a	ENSGT00950000182953.C.c
Cyprinodontiformes	ANCESTRAL SPECIES	1	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00940000166311	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a
Aplocheiloidei	ANCESTRAL SPECIES	21	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01030000235339	ENSGT01100000263649	ENSGT00940000161008.e	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000166311	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a	ENSGT00950000182953.C.c
Mangrove rivulus	MODERN SPECIES	21	DMXL1 (ENSKMAG00000001136)	sema6a (ENSKMAG00000001369)	COMMD10 (ENSKMAG00000001440)	ENSKMAG00000001471	AP3S1 (ENSKMAG00000001484)	cdo1 (ENSKMAG00000001522)	ENSKMAG00000001540	lifra (ENSKMAG00000001550)	ENSKMAG00000001568	ENSKMAG00000001637	pdxp (ENSKMAG00000001683)	mrps36 (ENSKMAG00000001690)	ENSKMAG00000001742 #8	ENSKMAG00000001828 ##13	scamp1 (ENSKMAG00000001843) #14	otpb (ENSKMAG00000001897) #22	ENSKMAG00000001924	ckmt2a (ENSKMAG00000001939)	rasgrf2b (ENSKMAG00000002012)	msh3 (ENSKMAG00000002204)	ENSKMAG00000002564	ENSKMAG00000002587	ENSKMAG00000002595	ENSKMAG00000002604	MYORG (ENSKMAG00000002622)	dusp2 (ENSKMAG00000002651)	adra2b (ENSKMAG00000002655)	gpat2 (ENSKMAG00000002678)	fahd2a (ENSKMAG00000002803)	zgc:152830 (ENSKMAG00000002842)	pcna (ENSKMAG00000002907)
Turquoise killifish	MODERN SPECIES	1627	ENSNFUG00015012581	PRR16 (ENSNFUG00015012584)	hsd17b4 (ENSNFUG00015012592)	DMXL1 (ENSNFUG00015012627)	sema6a (ENSNFUG00015012748)	COMMD10 (ENSNFUG00015012814)	AP3S1 (ENSNFUG00015012824)	CDO1 (ENSNFUG00015012843)	ENSNFUG00015012851	LIFRA (ENSNFUG00015012860)	PDXP (ENSNFUG00015012917)	MRPS36 (ENSNFUG00015012923)	ENSNFUG00015012931 #8	ENSNFUG00015013122 ##13	Nfu_g_1_009407 (ENSNFUG00015013128) #14	otpb (ENSNFUG00015013153) #22	ENSNFUG00015013160	ckmt2a (ENSNFUG00015013170)	ENSNFUG00015013185	msh3 (ENSNFUG00015013228)	ENSNFUG00015014390	ENSNFUG00015014407	KIAA1161 (ENSNFUG00015014422)	DUSP2 (ENSNFUG00015014438)	ADRA2B (ENSNFUG00015014444)	gpat2 (ENSNFUG00015014453)	FAHD2A (ENSNFUG00015014502)	pcna (ENSNFUG00015014638)	KCNIP3 (ENSNFUG00015014663)	SLC23A2 (ENSNFUG00015014749)	ENSNFUG00015015066
Cyprinodontoidei	ANCESTRAL SPECIES	1	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00730000111210	ENSGT00390000004965	ENSGT00940000158782.d.a
NAME_4	ANCESTRAL SPECIES	24	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT00940000161008.e	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00730000111210	ENSGT00390000004965	ENSGT00940000158782.d.a	ENSGT00950000182953.C.c
Mummichog	MODERN SPECIES	2272	hsd17b4 (ENSFHEG00000020106)	DMXL1 (ENSFHEG00000020309)	sema6a (ENSFHEG00000020341)	sema6a (ENSFHEG00000020352)	COMMD10 (ENSFHEG00000020362)	AP3S1 (ENSFHEG00000020380)	cdo1 (ENSFHEG00000000590)	ENSFHEG00000020410	ENSFHEG00000000869	spef2 (ENSFHEG00000021227)	pdxp (ENSFHEG00000021262)	mrps36 (ENSFHEG00000021291)	ENSFHEG00000021297 #8	ENSFHEG00000021313 #8	ENSFHEG00000021333 ##13	otpb (ENSFHEG00000021353) #22	ENSFHEG00000021363	ckmt2a (ENSFHEG00000021390)	rasgrf2b (ENSFHEG00000021480)	msh3 (ENSFHEG00000021546)	ENSFHEG00000021566	ENSFHEG00000021578	MYORG (ENSFHEG00000021601)	dusp2 (ENSFHEG00000021610)	adra2b (ENSFHEG00000021618)	gpat2 (ENSFHEG00000021629)	FAHD2A (ENSFHEG00000021680)	zgc:152830 (ENSFHEG00000021752)	mns1 (ENSFHEG00000021777)	pcna (ENSFHEG00000021804)	KCNIP3 (ENSFHEG00000021813)
Sheepshead minnow	MODERN SPECIES	129	atp1a2a (ENSCVAG00000010938)	sdhc (ENSCVAG00000010974)	cadm3 (ENSCVAG00000010999)	kirrel1b (ENSCVAG00000011050)	ENSCVAG00000011064	cdo1 (ENSCVAG00000011082)	ENSCVAG00000011096	ENSCVAG00000011113	pdxp (ENSCVAG00000011119)	mrps36 (ENSCVAG00000011133)	ENSCVAG00000011172 #8	ENSCVAG00000000311 #8	ENSCVAG00000011934 ##13	scamp1 (ENSCVAG00000011999) #14	ENSCVAG00000012021	otpb (ENSCVAG00000012046) #22	ENSCVAG00000012082	ckmt2a (ENSCVAG00000012125)	rasgrf2b (ENSCVAG00000012271)
Poeciliinae	ANCESTRAL SPECIES	5	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565.h	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949.k	ENSGT01100000263860	ENSGT00550000074949.l	ENSGT01070000253853	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00940000166311	ENSGT00530000063255.C
Poecilia	ANCESTRAL SPECIES	3	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565.h	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949.k	ENSGT01100000263860.a.b.a	ENSGT01100000263860.a.a	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000166311	ENSGT00530000063255.C	ENSGT00730000111210	ENSGT00390000004965
NAME_6	ANCESTRAL SPECIES	82	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565.h	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949.k	ENSGT01100000263860.a.b.a
Amazon molly	MODERN SPECIES	340	hsd17b4 (ENSPFOG00000004195)	DMXL1 (ENSPFOG00000003104)	SEMA6A (ENSPFOG00000002874)	sema6a (ENSPFOG00000002593)	COMMD10 (ENSPFOG00000002561)	AP3S1 (ENSPFOG00000002499)	cdo1 (ENSPFOG00000002497)	ENSPFOG00000002245	ENSPFOG00000002120	ENSPFOG00000001952	pdxp (ENSPFOG00000001900)	mrps36 (ENSPFOG00000001860)	ENSPFOG00000001689 #8	ENSPFOG00000001608 ##13	scamp1 (ENSPFOG00000001460) #14	otpb (ENSPFOG00000001352) #22	ENSPFOG00000001274	ckmt2a (ENSPFOG00000001185)	rasgrf2b (ENSPFOG00000000906)	msh3 (ENSPFOG00000000563)
Sailfin molly	MODERN SPECIES	838									spef2 (ENSPLAG00000016505)	pdxp (ENSPLAG00000016539)	mrps36 (ENSPLAG00000016546)	ENSPLAG00000016568 #8	ENSPLAG00000016587 #8	ENSPLAG00000016593 ##13	scamp1 (ENSPLAG00000016646) #14	otpb (ENSPLAG00000016667) #22	ENSPLAG00000016690	ckmt2a (ENSPLAG00000016707)	rasgrf2b (ENSPLAG00000000620)
Platyfish	MODERN SPECIES	3	hsd17b4 (ENSXMAG00000016234)	DMXL1 (ENSXMAG00000016332)	sema6a (ENSXMAG00000021461)	COMMD10 (ENSXMAG00000016453)	AP3S1 (ENSXMAG00000016466)	cdo1 (ENSXMAG00000029910)	ENSXMAG00000016486	ENSXMAG00000016494	ENSXMAG00000016495	pdxp (ENSXMAG00000016546)	mrps36 (ENSXMAG00000016548)	ENSXMAG00000022438 #8	ENSXMAG00000016568 #8	ENSXMAG00000016575 ##13	scamp1 (ENSXMAG00000024922) #14	otpb (ENSXMAG00000016614) #22	ENSXMAG00000016619	ckmt2a (ENSXMAG00000016636)	rasgrf2b (ENSXMAG00000016680)	ENSXMAG00000022534	ENSXMAG00000025083	msh3 (ENSXMAG00000016720)	NTRK2 (ENSXMAG00000016744)	agtpbp1 (ENSXMAG00000016766)	naa35 (ENSXMAG00000016788)	ENSXMAG00000022545	GOLM1 (ENSXMAG00000016871)	lmbrd2a (ENSXMAG00000016875)	slc1a3a (ENSXMAG00000016896)	nipbla (ENSXMAG00000016926)	ndc80 (ENSXMAG00000017031)
Oryzias	ANCESTRAL SPECIES	7	ENSGT00910000144204.a	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT00940000161008.e	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a	ENSGT00950000182953.C.c	ENSGT00940000158546
Oryzias_b	ANCESTRAL SPECIES	6	ENSGT00910000144204.a	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT00940000161008.e	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000166311	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a	ENSGT00950000182953.C.c	ENSGT00940000158546
Javanese ricefish	MODERN SPECIES	23	prr16 (ENSOJAG00000015872)	hsd17b4 (ENSOJAG00000012252)	DMXL1 (ENSOJAG00000006307)	sema6a (ENSOJAG00000011490)	COMMD10 (ENSOJAG00000011442)	AP3S1 (ENSOJAG00000011328)	cdo1 (ENSOJAG00000011296)	ENSOJAG00000011230	lifra (ENSOJAG00000011198)	spef2 (ENSOJAG00000011132)	pdxp (ENSOJAG00000011099)	mrps36 (ENSOJAG00000011085)	ENSOJAG00000011001 #8	ENSOJAG00000010987 ##13	scamp1 (ENSOJAG00000010921) #14	otpb (ENSOJAG00000010884) #22	ENSOJAG00000010872	rasgrf2b (ENSOJAG00000010445)	msh3 (ENSOJAG00000008533)	ENSOJAG00000008360	MYORG (ENSOJAG00000008347)	dusp2 (ENSOJAG00000008331)	adra2b (ENSOJAG00000008321)	gpat2 (ENSOJAG00000008212)	fahd2a (ENSOJAG00000008162)	zgc:152830 (ENSOJAG00000008090)	pcna (ENSOJAG00000008050)	ENSOJAG00000007993	SLC23A2 (ENSOJAG00000007212)	rassf2a (ENSOJAG00000007073)	ENSOJAG00000007051
Indian medaka	MODERN SPECIES	11	prr16 (ENSOMEG00000019888)	hsd17b4 (ENSOMEG00000019866)	DMXL1 (ENSOMEG00000019793)	sema6a (ENSOMEG00000019695)	COMMD10 (ENSOMEG00000019553)	AP3S1 (ENSOMEG00000019507)	cdo1 (ENSOMEG00000019463)	ENSOMEG00000019434	lifra (ENSOMEG00000019414)	spef2 (ENSOMEG00000019266)	pdxp (ENSOMEG00000019075)	mrps36 (ENSOMEG00000019062)	ENSOMEG00000019041 #8	ENSOMEG00000018996 ##13	scamp1 (ENSOMEG00000018965) #14	otpb (ENSOMEG00000000708) #22	ENSOMEG00000018866	ckmt2a (ENSOMEG00000018857)	rasgrf2b (ENSOMEG00000000805)	msh3 (ENSOMEG00000018740)	ENSOMEG00000018681	ENSOMEG00000018671	MYORG (ENSOMEG00000018651)	dusp2 (ENSOMEG00000018612)	adra2b (ENSOMEG00000018593)	gpat2 (ENSOMEG00000018563)	fahd2a (ENSOMEG00000018473)	zgc:152830 (ENSOMEG00000018458)	pcna (ENSOMEG00000018421)	KCNIP3 (ENSOMEG00000018379)	SLC23A2 (ENSOMEG00000018332)
Oryzias_a	ANCESTRAL SPECIES	3	ENSGT00910000144204.a	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287.c	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT00940000161008.e	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a	ENSGT00950000182953.C.c	ENSGT00940000158546
Japanese Medaka HdrR	MODERN SPECIES	23	hsd17b4 (ENSORLG00000003551)	DMXL1 (ENSORLG00000003487)	sema6a (ENSORLG00000003447)	ENSORLG00000027333	COMMD10 (ENSORLG00000003421)	AP3S1 (ENSORLG00000003409)	cdo1 (ENSORLG00000003390)	ENSORLG00000003378	lifra (ENSORLG00000003358)	spef2 (ENSORLG00000003349)	mrps36 (ENSORLG00000028218)	pdxp (ENSORLG00000024748)	ENSORLG00000003310 #8	ENSORLG00000003278 ##13	SCAMP1 (ENSORLG00000003266) #14	otpb (ENSORLG00000025542) #22	ENSORLG00000003230	CKMT2 (ENSORLG00000003211)	rasgrf2b (ENSORLG00000003190)	msh3 (ENSORLG00000003076)	ENSORLG00000027894	ENSORLG00000027888	ENSORLG00000003060	ENSORLG00000027682	ENSORLG00000003057	dusp2 (ENSORLG00000003043)	adra2b (ENSORLG00000003027)	gpat2 (ENSORLG00000003003)	FAHD2A (ENSORLG00000002982)	zgc:152830 (ENSORLG00000002965)	pcna (ENSORLG00000002937)
Chinese medaka	MODERN SPECIES	1064	DMXL1 (ENSOSIG00000022351)	sema6a (ENSOSIG00000022449)	COMMD10 (ENSOSIG00000023086)	ENSOSIG00000023088	AP3S1 (ENSOSIG00000023091)	cdo1 (ENSOSIG00000023095)	ENSOSIG00000023099	ENSOSIG00000023102	lifra (ENSOSIG00000023111)	ENSOSIG00000023114	pdxp (ENSOSIG00000023115)	mrps36 (ENSOSIG00000023119)	ENSOSIG00000023128 #8	ENSOSIG00000023133 ##13	scamp1 (ENSOSIG00000023152) #14	otpb (ENSOSIG00000023187) #22	RASGRF2 (ENSOSIG00000023203)	msh3 (ENSOSIG00000023233)	MYORG (ENSOSIG00000023261)	dusp2 (ENSOSIG00000023264)	adra2b (ENSOSIG00000023268)
Ovalentaria_B	ANCESTRAL SPECIES	9	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01100000263927	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965
Pomacentridae	ANCESTRAL SPECIES		ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01100000263649	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00940000166311	ENSGT00530000063255.C
Pomacentridae_A	ANCESTRAL SPECIES	1	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01100000263649	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000166311	ENSGT00530000063255.C	ENSGT00390000004965
Amphiprion	ANCESTRAL SPECIES	20	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01100000263649	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000166311	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a
Clown anemonefish	MODERN SPECIES	3622	DMXL1 (ENSAOCG00000016550)	ENSAOCG00000016621	sema6a (ENSAOCG00000016717)	COMMD10 (ENSAOCG00000016777)	AP3S1 (ENSAOCG00000016832)	cdo1 (ENSAOCG00000016872)	ENSAOCG00000016895	lifra (ENSAOCG00000001168)	spef2 (ENSAOCG00000017034)	ENSAOCG00000001172	pdxp (ENSAOCG00000001175)	mrps36 (ENSAOCG00000017088)	ENSAOCG00000017128 #8	ENSAOCG00000017155 ##13	scamp1 (ENSAOCG00000017187) #14	otpb (ENSAOCG00000017211) #22	ENSAOCG00000017223	ENSAOCG00000017236	ckmt2a (ENSAOCG00000017273)	rasgrf2b (ENSAOCG00000001212)	msh3 (ENSAOCG00000017411)	ENSAOCG00000017432	MYORG (ENSAOCG00000017467)	ENSAOCG00000017484	dusp2 (ENSAOCG00000017497)	adra2b (ENSAOCG00000017504)	gpat2 (ENSAOCG00000017534)	fahd2a (ENSAOCG00000017570)	zgc:152830 (ENSAOCG00000002732)
Orange clownfish	MODERN SPECIES	19	COMMD10 (ENSAPEG00000019601)	AP3S1 (ENSAPEG00000019564)	cdo1 (ENSAPEG00000019532)	ENSAPEG00000019512	lifra (ENSAPEG00000019494)	spef2 (ENSAPEG00000019443)	ENSAPEG00000019432	pdxp (ENSAPEG00000019422)	mrps36 (ENSAPEG00000019416)	ENSAPEG00000019395 #8	ENSAPEG00000019219 #8	ENSAPEG00000018648 #8	ENSAPEG00000018591 ##13	scamp1 (ENSAPEG00000018554) #14	ENSAPEG00000018539	otpb (ENSAPEG00000018531) #22	ENSAPEG00000018513	ENSAPEG00000018504	ckmt2a (ENSAPEG00000018475)	rasgrf2b (ENSAPEG00000018407)	msh3 (ENSAPEG00000018385)	ENSAPEG00000018369	MYORG (ENSAPEG00000018350)	dusp2 (ENSAPEG00000018339)	adra2b (ENSAPEG00000018326)	gpat2 (ENSAPEG00000018168)	fahd2a (ENSAPEG00000018120)	zgc:152830 (ENSAPEG00000018050)	pcna (ENSAPEG00000018016)	KCNIP3 (ENSAPEG00000017984)	SLC23A2 (ENSAPEG00000017907)
Spiny chromis	MODERN SPECIES	129	sema6a (ENSAPOG00000003572)	ENSAPOG00000003473	COMMD10 (ENSAPOG00000003465)	AP3S1 (ENSAPOG00000003452)	cdo1 (ENSAPOG00000003408)	ENSAPOG00000003383	lifra (ENSAPOG00000003373)	spef2 (ENSAPOG00000003339)	ENSAPOG00000003256	pdxp (ENSAPOG00000003239)	mrps36 (ENSAPOG00000003231)	ENSAPOG00000003203 #8	ENSAPOG00000003169 #8	ENSAPOG00000003137 ##13	scamp1 (ENSAPOG00000003118) #14	otpb (ENSAPOG00000003078) #22	ENSAPOG00000003053	ENSAPOG00000003022	ckmt2a (ENSAPOG00000003007)	rasgrf2b (ENSAPOG00000002966)	msh3 (ENSAPOG00000002868)	ENSAPOG00000002848
Bicolor damselfish	MODERN SPECIES	2378																otpb (ENSSPAG00000021082) #22	ENSSPAG00000021109	ckmt2a (ENSSPAG00000021268)
Cichlidae	ANCESTRAL SPECIES	6	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01100000263927	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	11	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000162045	ENSGT00390000017443.lb	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853.e.b.a	ENSGT01070000253853.e.a	ENSGT01100000263649.c	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	8	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000162045	ENSGT00390000017443.lb	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853.e.b.b	ENSGT01070000253853.e.b.a	ENSGT01070000253853.e.a	ENSGT01100000263649.c	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571
Haplochromini	ANCESTRAL SPECIES	4	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000162045	ENSGT00390000017443.lb	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853.e.a.c	ENSGT01100000263649.c.b	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965
Burton s mouthbrooder	MODERN SPECIES	296	prr16 (ENSHBUG00000002839)	hsd17b4 (ENSHBUG00000002823)	DMXL1 (ENSHBUG00000002746)	sema6a (ENSHBUG00000002682)	COMMD10 (ENSHBUG00000002629)	AP3S1 (ENSHBUG00000002605)	cdo1 (ENSHBUG00000002592)	ENSHBUG00000002574	lifra (ENSHBUG00000002560)	spef2 (ENSHBUG00000002462)	pdxp (ENSHBUG00000002129)	mrps36 (ENSHBUG00000002117)	ENSHBUG00000002068 #8	ENSHBUG00000002051 ##13	scamp1 (ENSHBUG00000002039) #14	otpb (ENSHBUG00000002023) #22	ENSHBUG00000002020	ENSHBUG00000002007	ckmt2a (ENSHBUG00000001998)	rasgrf2b (ENSHBUG00000001955)	msh3 (ENSHBUG00000001900)	ENSHBUG00000001881	ENSHBUG00000001875	ENSHBUG00000001868	ENSHBUG00000001862	MYORG (ENSHBUG00000001852)	dusp2 (ENSHBUG00000001839)	adra2b (ENSHBUG00000001834)
Haplochromini_A	ANCESTRAL SPECIES	4	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000162045	ENSGT00390000017443.lb	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853.e.a.c	ENSGT01100000263649.c.b	ENSGT01100000263649.c.a	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C
P. nyererei	MODERN SPECIES	408	DMXL1 (ENSPNYG00000017313)	sema6a (ENSPNYG00000017551)	ENSPNYG00000017592	COMMD10 (ENSPNYG00000017618)	AP3S1 (ENSPNYG00000017651)	cdo1 (ENSPNYG00000017670)	ENSPNYG00000017685	lifra (ENSPNYG00000017699)	spef2 (ENSPNYG00000017718)	pdxp (ENSPNYG00000017790)	mrps36 (ENSPNYG00000017803)	ENSPNYG00000017818 #8	ENSPNYG00000017850 #8	ENSPNYG00000017864 ##13	scamp1 (ENSPNYG00000017880) #14	otpb (ENSPNYG00000017891) #22	ENSPNYG00000017906	ENSPNYG00000017962	ckmt2a (ENSPNYG00000017975)	rasgrf2b (ENSPNYG00000018007)	msh3 (ENSPNYG00000018144)	ENSPNYG00000018183	ENSPNYG00000018187
Haplochromini_B	ANCESTRAL SPECIES	2	ENSGT00910000144204.a	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000162045	ENSGT00390000017443.lb	ENSGT00390000003122.a.a.b.a #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853.e.b.b	ENSGT01070000253853.e.a.c	ENSGT01100000263649.c.b	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C
Zebra mbuna	MODERN SPECIES	1094	prr16 (ENSMZEG00005008534)	hsd17b4 (ENSMZEG00005008558)	DMXL1 (ENSMZEG00005008659)	sema6a (ENSMZEG00005008800)	COMMD10 (ENSMZEG00005008881)	AP3S1 (ENSMZEG00005008898)	cdo1 (ENSMZEG00005008922)	ENSMZEG00005008936	lifra (ENSMZEG00005008952)	ENSMZEG00005008970	pdxp (ENSMZEG00005008982)	mrps36 (ENSMZEG00005008995)	ENSMZEG00005009004 #8	ENSMZEG00005009044 ##13	scamp1 (ENSMZEG00005009067) #14	otpb (ENSMZEG00005009113) #22	ENSMZEG00005009127	ENSMZEG00005009140	ENSMZEG00005009151	ckmt2a (ENSMZEG00005009166)	rasgrf2b (ENSMZEG00005009197)	msh3 (ENSMZEG00005009271)	ENSMZEG00005009311	ENSMZEG00005009319	ENSMZEG00005009326	ENSMZEG00005009335	ENSMZEG00005009338	MYORG (ENSMZEG00005009348)	dusp2 (ENSMZEG00005009360)	adra2b (ENSMZEG00005009366)	gpat2 (ENSMZEG00005009379)
Eastern happy	MODERN SPECIES	3	prr16 (ENSACLG00000013331)	hsd17b4 (ENSACLG00000013301)	DMXL1 (ENSACLG00000013246)	sema6a (ENSACLG00000013097)	COMMD10 (ENSACLG00000013081)	AP3S1 (ENSACLG00000013077)	cdo1 (ENSACLG00000013072)	ENSACLG00000013069	lifra (ENSACLG00000012702)	ENSACLG00000012693	pdxp (ENSACLG00000012686)	mrps36 (ENSACLG00000012574)	ENSACLG00000012537 #8	ENSACLG00000012506 ##13	scamp1 (ENSACLG00000012450) #14	otpb (ENSACLG00000012425) #22	ENSACLG00000012415	ENSACLG00000012399	ckmt2a (ENSACLG00000012315)	rasgrf2b (ENSACLG00000012112)	msh3 (ENSACLG00000012067)	ENSACLG00000012061	ENSACLG00000012050	ENSACLG00000012012	ENSACLG00000011999	MYORG (ENSACLG00000011967)	ENSACLG00000011947	dusp2 (ENSACLG00000011943)	adra2b (ENSACLG00000011940)	gpat2 (ENSACLG00000011851)	FAHD2A (ENSACLG00000011686)
Lyretail cichlid	MODERN SPECIES	306	hsd17b4 (ENSNBRG00000016012)	DMXL1 (ENSNBRG00000016357)	SEMA6A (ENSNBRG00000016462)	sema6a (ENSNBRG00000016507)	COMMD10 (ENSNBRG00000016535)	AP3S1 (ENSNBRG00000016685)	cdo1 (ENSNBRG00000017002)	ENSNBRG00000017022	lifra (ENSNBRG00000017052)	spef2 (ENSNBRG00000017118)	pdxp (ENSNBRG00000017292)	mrps36 (ENSNBRG00000017305)	ENSNBRG00000017332 #8	ENSNBRG00000017355 ##13	scamp1 (ENSNBRG00000017376) #14	otpb (ENSNBRG00000017402) #22	ENSNBRG00000017423	ENSNBRG00000017483	ckmt2a (ENSNBRG00000017503)	rasgrf2b (ENSNBRG00000017537)	msh3 (ENSNBRG00000017564)	ENSNBRG00000017602	ENSNBRG00000017608	ENSNBRG00000017622	MYORG (ENSNBRG00000017637)	dusp2 (ENSNBRG00000017661)	adra2b (ENSNBRG00000017684)	gpat2 (ENSNBRG00000017707)	FAHD2A (ENSNBRG00000017825)	zgc:152830 (ENSNBRG00000017857)	pcna (ENSNBRG00000017935)
Nile tilapia	MODERN SPECIES	3	ENSONIG00000014518	ENSONIG00000014517	prr16 (ENSONIG00000014516)	hsd17b4 (ENSONIG00000014505)	DMXL1 (ENSONIG00000014493)	sema6a (ENSONIG00000014486)	COMMD10 (ENSONIG00000014485)	AP3S1 (ENSONIG00000014481)	cdo1 (ENSONIG00000014479)	CEP78 (ENSONIG00000014475)	lifra (ENSONIG00000014473)	spef2 (ENSONIG00000014471)	pdxp (ENSONIG00000037485)	mrps36 (ENSONIG00000014470)	ENSONIG00000014465 #8	LHFPL2 (ENSONIG00000031614) #22	scamp1 (ENSONIG00000014460) #14	ENSONIG00000014458	ckmt2a (ENSONIG00000014455)	rasgrf2b (ENSONIG00000014451)	msh3 (ENSONIG00000014449)	ENSONIG00000031633	ENSONIG00000034144	ENSONIG00000037845	ENSONIG00000038851	MYORG (ENSONIG00000014448)	dusp2 (ENSONIG00000035621)	adra2b (ENSONIG00000020433)	gpat2 (ENSONIG00000014440)	FAHD2A (ENSONIG00000037466)	zgc:152830 (ENSONIG00000014435)
Midas cichlid	MODERN SPECIES	299	prr16 (ENSACIG00000005043)	ENSACIG00000005062	DMXL1 (ENSACIG00000005116)	sema6a (ENSACIG00000005224)	COMMD10 (ENSACIG00000005259)	AP3S1 (ENSACIG00000005300)	cdo1 (ENSACIG00000005324)	CEP78 (ENSACIG00000005332)	ENSACIG00000005355	ENSACIG00000005389	pdxp (ENSACIG00000005411)	mrps36 (ENSACIG00000005431)	ENSACIG00000005471 #8	ENSACIG00000005496 ##13	scamp1 (ENSACIG00000005504) #14	otpb (ENSACIG00000005567) #22	ENSACIG00000005572	ckmt2a (ENSACIG00000005586)	rasgrf2b (ENSACIG00000005616)	msh3 (ENSACIG00000005690)	ENSACIG00000005775	ENSACIG00000005782	ENSACIG00000005791	ENSACIG00000005799	ENSACIG00000005809	ENSACIG00000005811	ENSACIG00000005823	ENSACIG00000005839	ENSACIG00000005849	MYORG (ENSACIG00000005859)	dusp2 (ENSACIG00000005880)
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000181535	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01100000263649	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a.jc	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000181535	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01060000249528	ENSGT01100000263649	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C
Anabantaria	ANCESTRAL SPECIES	4	ENSGT00910000144204.a	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a.jc	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01060000249528	ENSGT01100000263649	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C
Zig-zag eel	MODERN SPECIES	23	ENSMAMG00000016037	ENSMAMG00000015997	ENSMAMG00000015941	ENSMAMG00000015867	mapk1 (ENSMAMG00000015823)	ENSMAMG00000015800	ppil2 (ENSMAMG00000015787)	ENSMAMG00000015769	ENSMAMG00000015723	ENSMAMG00000015598	ENSMAMG00000028538	ENSMAMG00000015489	ENSMAMG00000015452 #8	ENSMAMG00000015438 ##13	ENSMAMG00000015385 #14	otpb (ENSMAMG00000015369) #22	ENSMAMG00000015356	ENSMAMG00000015338	CKMT2 (ENSMAMG00000015297)	ENSMAMG00000015244	MSH3 (ENSMAMG00000015232)	ENSMAMG00000025066	ENSMAMG00000025996	ENSMAMG00000028188	ENSMAMG00000015208	ENSMAMG00000015171	dusp2 (ENSMAMG00000015164)	adra2b (ENSMAMG00000015149)	gpat2 (ENSMAMG00000015107)	FAHD2A (ENSMAMG00000015071)	zgc:152830 (ENSMAMG00000015010)
Anabantoidei	ANCESTRAL SPECIES	4	ENSGT00910000144204.a	ENSGT00940000158343	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a.jc	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01060000249528	ENSGT01100000263649	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C
Siamese fighting fish	MODERN SPECIES	20	COMMD10 (ENSBSLG00000004760)	AP3S1 (ENSBSLG00000004838)	cdo1 (ENSBSLG00000004951)	ENSBSLG00000004983	lifra (ENSBSLG00000005055)	spef2 (ENSBSLG00000005442)	ENSBSLG00000006397	ENSBSLG00000006439	ENSBSLG00000006531	ENSBSLG00000006545	pdxp (ENSBSLG00000006571)	mrps36 (ENSBSLG00000006598)	ENSBSLG00000006641 #8	ENSBSLG00000006694 ##13	scamp1 (ENSBSLG00000006705) #14	otpb (ENSBSLG00000006744) #22	ENSBSLG00000006771	CKMT2 (ENSBSLG00000006824)	rasgrf2b (ENSBSLG00000006958)	msh3 (ENSBSLG00000007047)	ENSBSLG00000007563	ENSBSLG00000007762	ENSBSLG00000007786	ENSBSLG00000007821	ENSBSLG00000007835	ENSBSLG00000007849	MYORG (ENSBSLG00000007866)	ENSBSLG00000007882	dusp2 (ENSBSLG00000007906)	adra2b (ENSBSLG00000007914)	gpat2 (ENSBSLG00000007921)
Climbing perch	MODERN SPECIES	22	ENSATEG00000018697	ENSATEG00000018733	DMXL1 (ENSATEG00000018864)	ENSATEG00000019102	COMMD10 (ENSATEG00000019168)	ENSATEG00000019189	ENSATEG00000019206	ENSATEG00000019228	ENSATEG00000019255	ENSATEG00000019290	ENSATEG00000019341	ENSATEG00000019347	ENSATEG00000019354 #8	ENSATEG00000019377 ##13	ENSATEG00000019393 #14	otpb (ENSATEG00000019427) #22	ENSATEG00000019435	ENSATEG00000019446	CKMT2 (ENSATEG00000019453)	rasgrf2b (ENSATEG00000019495)	msh3 (ENSATEG00000019638)	ENSATEG00000030032	ENSATEG00000019709	ENSATEG00000019724	ENSATEG00000027410	dusp2 (ENSATEG00000026195)	adra2b (ENSATEG00000019770)	gpat2 (ENSATEG00000019786)	FAHD2A (ENSATEG00000019916)	zgc:152830 (ENSATEG00000019946)	ENSATEG00000019990
Carangaria	ANCESTRAL SPECIES	9	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a.jc	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000181535	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01090000260308	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965
Carangaria_A	ANCESTRAL SPECIES	6	ENSGT00390000001500	ENSGT00970000193421.C.a.ic.a	ENSGT00970000193421.C.a.jc	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000181535	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01090000260308.b.b	ENSGT00940000161008.e	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a
Seriola	ANCESTRAL SPECIES	72			ENSGT00390000017970.f.b	ENSGT01030000234564.a.a.b.b	ENSGT00940000153771.B	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000181535	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01060000249528	ENSGT01090000260308.b.b.a	ENSGT00940000161008.e	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a
Yellowtail amberjack	MODERN SPECIES	2450			gldc (ENSSLDG00000023553)	mboat4 (ENSSLDG00000023597)	coq2 (ENSSLDG00000023632)	lifra (ENSSLDG00000023643)	spef2 (ENSSLDG00000023671)	ENSSLDG00000023714	ENSSLDG00000023717	pdxp (ENSSLDG00000023727)	mrps36 (ENSSLDG00000023729)	ENSSLDG00000023738 #8	ENSSLDG00000023770 #8	ENSSLDG00000023851 ##13	scamp1 (ENSSLDG00000023857) #14	otpb (ENSSLDG00000023870) #22	ENSSLDG00000023879	ENSSLDG00000023884	ckmt2a (ENSSLDG00000023893)
Greater amberjack	MODERN SPECIES	215					ENSSDUG00000004326	mboat4 (ENSSDUG00000004299)	coq2 (ENSSDUG00000004275)	lifra (ENSSDUG00000004220)	spef2 (ENSSDUG00000004108)	pdxp (ENSSDUG00000004096)	mrps36 (ENSSDUG00000004088)	ENSSDUG00000004062 #8	ENSSDUG00000003662 #8	ENSSDUG00000003615 ##13	scamp1 (ENSSDUG00000003589) #14	otpb (ENSSDUG00000003569) #22	ENSSDUG00000003558	ENSSDUG00000003544	CKMT2 (ENSSDUG00000003516)	rasgrf2b (ENSSDUG00000003447)	ENSSDUG00000003435	ENSSDUG00000003426	ENSSDUG00000003421	msh3 (ENSSDUG00000003357)	MYORG (ENSSDUG00000003331)	dusp2 (ENSSDUG00000003321)	adra2b (ENSSDUG00000003296)	gpat2 (ENSSDUG00000003258)	FAHD2A (ENSSDUG00000003227)	zgc:152830 (ENSSDUG00000003162)	pcna (ENSSDUG00000003125)
Barramundi perch	MODERN SPECIES	9	DMXL1 (ENSLCAG00010004481)	sema6a (ENSLCAG00010004465)	COMMD10 (ENSLCAG00010004452)	AP3S1 (ENSLCAG00010004424)	cdo1 (ENSLCAG00010004401)	ENSLCAG00010004375	lifra (ENSLCAG00010004350)	spef2 (ENSLCAG00010004339)	ENSLCAG00010004333	pdxp (ENSLCAG00010004328)	ENSLCAG00010004323	ENSLCAG00010004279 #8	ENSLCAG00010004267 #8	ENSLCAG00010004265 ##13	scamp1 (ENSLCAG00010004260) #14	otpb (ENSLCAG00010004253) #22	ENSLCAG00010004250	ENSLCAG00010004249	CKMT2 (ENSLCAG00010004227)	RASGRF2 (ENSLCAG00010004176)	msh3 (ENSLCAG00010003952)	ENSLCAG00010003914	ENSLCAG00010003911	ENSLCAG00010003908	ENSLCAG00010003905	ENSLCAG00010003903	ENSLCAG00010003900	ENSLCAG00010003898	ENSLCAG00010003896	ENSLCAG00010003894	ENSLCAG00010003891
Pleuronectoidei	ANCESTRAL SPECIES	8	ENSGT00390000000096.a.f	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a.jc	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01090000260308	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a
Turbot	MODERN SPECIES	21	ENSSMAG00000004707	DMXL1 (ENSSMAG00000004792)	ENSSMAG00000004891	COMMD10 (ENSSMAG00000005004)	ENSSMAG00000005025	ENSSMAG00000005068	ENSSMAG00000005084	ENSSMAG00000005143	ENSSMAG00000005190	ENSSMAG00000005225	ENSSMAG00000025714	ENSSMAG00000005249	ENSSMAG00000005258 #8	ENSSMAG00000005329 ##13	ENSSMAG00000005357 #14	otpb (ENSSMAG00000005414) #22	ENSSMAG00000026806	ENSSMAG00000031758	CKMT2 (ENSSMAG00000005443)	rasgrf2b (ENSSMAG00000005481)	msh3 (ENSSMAG00000005517)	ENSSMAG00000030909	ENSSMAG00000005535	ENSSMAG00000005550	ENSSMAG00000032881	dusp2 (ENSSMAG00000005569)	adra2b (ENSSMAG00000005579)	gpat2 (ENSSMAG00000005588)	FAHD2A (ENSSMAG00000005662)	zgc:152830 (ENSSMAG00000005750)	ENSSMAG00000037578
Tongue sole	MODERN SPECIES	398	ENSCSEG00000018503	ENSCSEG00000018507	sema6a (ENSCSEG00000018522)	COMMD10 (ENSCSEG00000018586)	ENSCSEG00000018596	cdo1 (ENSCSEG00000018610)	ENSCSEG00000018625	lifra (ENSCSEG00000018636)	spef2 (ENSCSEG00000018648)	ENSCSEG00000018671	pdxp (ENSCSEG00000018679)	mrps36 (ENSCSEG00000018682)	ENSCSEG00000018700 #8	lhfpl2b (ENSCSEG00000018714) ##13	scamp1 (ENSCSEG00000018720) #14	otpb (ENSCSEG00000018724) #22	ENSCSEG00000018730	rasgrf2b (ENSCSEG00000018739)	msh3 (ENSCSEG00000018766)	MALT1 (ENSCSEG00000018777)	ENSCSEG00000018811	mrps30 (ENSCSEG00000018816)	hint2 (ENSCSEG00000018825)	ENSCSEG00000018853	ENSCSEG00000018882	PPEF2 (ENSCSEG00000018893)	scarb2a (ENSCSEG00000018922)	ENSCSEG00000018931	CCNG2 (ENSCSEG00000018957)	ST8SIA3 (ENSCSEG00000018966)	RAB27B (ENSCSEG00000018974)
Eupercaria	ANCESTRAL SPECIES	5	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000181535	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01030000235339	ENSGT01100000263649	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C
Tetraodontidae	ANCESTRAL SPECIES	12	ENSGT00940000161685.B	ENSGT00950000183166.a.b.j	ENSGT00550000074856.c.b	ENSGT00390000008325.a	ENSGT00950000182843.a.b	ENSGT00550000074798.a.b	ENSGT00940000158664	ENSGT00940000159978	ENSGT00940000175206	ENSGT00390000004228	ENSGT00940000155831.bb	ENSGT00940000155776.b	ENSGT00390000015164	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01030000235339.a	ENSGT01030000235339.b	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00390000015667
Fugu	MODERN SPECIES	13	CLTCL1 (ENSTRUG00000011979)	SLC25A1 (ENSTRUG00000012369)	ENSTRUG00000012468	snap29 (ENSTRUG00000012491)	serpind1 (ENSTRUG00000013053)	hic1l (ENSTRUG00000013139)	ENSTRUG00000013159	ENSTRUG00000013170	utp15 (ENSTRUG00000020924)	ENSTRUG00000013212	ENSTRUG00000013425	ykt6 (ENSTRUG00000013460)	lhfpl2b (ENSTRUG00000032912) ##13	scamp1 (ENSTRUG00000013513) #14	ENSTRUG00000030524	otpb (ENSTRUG00000013760) #22	ENSTRUG00000013774	rasgrf2b (ENSTRUG00000013821)	msh3 (ENSTRUG00000014036)	ENSTRUG00000029115	ENSTRUG00000030382	ENSTRUG00000030634	ENSTRUG00000027858	MYORG (ENSTRUG00000014103)	dusp2 (ENSTRUG00000024213)	adra2b (ENSTRUG00000020960)	gpat2 (ENSTRUG00000014215)	FAHD2A (ENSTRUG00000014231)	zgc:152830 (ENSTRUG00000014276)	pcna (ENSTRUG00000014304)	ENSTRUG00000014429
Tetraodon	MODERN SPECIES	3	ENSTNIG00000000988	CLTCL1 (ENSTNIG00000015394)	SLC25A1 (ENSTNIG00000015393)	ENSTNIG00000015392	snap29 (ENSTNIG00000015391)	pi4kab (ENSTNIG00000015389)	serpind1 (ENSTNIG00000015390)	hic1l (ENSTNIG00000001094)	ENSTNIG00000015388	utp15 (ENSTNIG00000015387)	ENSTNIG00000015386	ENSTNIG00000001808	ykt6 (ENSTNIG00000015385)	ENSTNIG00000015384 ##13	scamp1 (ENSTNIG00000015383) #14	otpb (ENSTNIG00000015382) #22	ENSTNIG00000015381	ckmt2a (ENSTNIG00000015380)	ENSTNIG00000015379	rasgrf2b (ENSTNIG00000015378)	msh3 (ENSTNIG00000015377)	ENSTNIG00000015376	ENSTNIG00000015375	MYORG (ENSTNIG00000015374)	ENSTNIG00000015373	dusp2 (ENSTNIG00000015372)	adra2b (ENSTNIG00000015371)	gpat2 (ENSTNIG00000000970)	FAHD2A (ENSTNIG00000015370)	zgc:152830 (ENSTNIG00000015369)	pcna (ENSTNIG00000015368)
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000181535	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01100000263649	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965
Ballan wrasse	MODERN SPECIES	282								lifra (ENSLBEG00000013610)	spef2 (ENSLBEG00000013670)	ENSLBEG00000013739	pdxp (ENSLBEG00000013764)	ENSLBEG00000013775	ENSLBEG00000013815 #8	ENSLBEG00000013893 ##13	scamp1 (ENSLBEG00000013925) #14	otpb (ENSLBEG00000013958) #22	ENSLBEG00000013984	ckmt2a (ENSLBEG00000014005)	rasgrf2b (ENSLBEG00000014136)	msh3 (ENSLBEG00000014307)	ENSLBEG00000014404	ENSLBEG00000014417	ENSLBEG00000014426	MYORG (ENSLBEG00000014445)	dusp2 (ENSLBEG00000014468)	adra2b (ENSLBEG00000014480)	gpat2 (ENSLBEG00000014519)	FAHD2A (ENSLBEG00000014603)	zgc:152830 (ENSLBEG00000014655)	pcna (ENSLBEG00000014768)	ENSLBEG00000014991
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000181535	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01100000263649	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965
Perciformes	ANCESTRAL SPECIES	6	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01030000235339	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01030000235339	ENSGT00940000161008.e	ENSGT00940000169964	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965
Channel bull blenny	MODERN SPECIES	23	DMXL1 (ENSCGOG00000001043)	sema6a (ENSCGOG00000001398)	COMMD10 (ENSCGOG00000002310)	AP3S1 (ENSCGOG00000002321)	cdo1 (ENSCGOG00000002420)	ENSCGOG00000002424	lifra (ENSCGOG00000002427)	spef2 (ENSCGOG00000002432)	ENSCGOG00000002446	pdxp (ENSCGOG00000002454)	mrps36 (ENSCGOG00000002452)	ENSCGOG00000002463 #8	ENSCGOG00000002535 #8	ENSCGOG00000002610 ##13	scamp1 (ENSCGOG00000002612) #14	otpb (ENSCGOG00000002852) #22	ENSCGOG00000002869	ENSCGOG00000002872	ckmt2a (ENSCGOG00000002876)	rasgrf2b (ENSCGOG00000002979)	msh3 (ENSCGOG00000004680)	ENSCGOG00000005690	MYORG (ENSCGOG00000005693)	MYORG (ENSCGOG00000005697)	dusp2 (ENSCGOG00000005706)	adra2b (ENSCGOG00000005707)	gpat2 (ENSCGOG00000005718)	FAHD2A (ENSCGOG00000005759)	zgc:152830 (ENSCGOG00000005784)	pcna (ENSCGOG00000005811)	KCNIP3 (ENSCGOG00000005862)
Pike perch	MODERN SPECIES	2	DMXL1 (ENSSLUG00000019890)	sema6a (ENSSLUG00000019700)	ENSSLUG00000019670	COMMD10 (ENSSLUG00000019665)	AP3S1 (ENSSLUG00000019651)	cdo1 (ENSSLUG00000019640)	ENSSLUG00000019635	ENSSLUG00000019629	spef2 (ENSSLUG00000019614)	ENSSLUG00000019605	pdxp (ENSSLUG00000019602)	mrps36 (ENSSLUG00000019599)	ENSSLUG00000019395 #8	ENSSLUG00000019381 ##13	scamp1 (ENSSLUG00000019364) #14	otpb (ENSSLUG00000019355) #22	ENSSLUG00000019349	ckmt2a (ENSSLUG00000019339)	ENSSLUG00000019334	rasgrf2b (ENSSLUG00000019220)	msh3 (ENSSLUG00000017157)	ENSSLUG00000017036	ENSSLUG00000017029	ENSSLUG00000017023	MYORG (ENSSLUG00000017002)	ENSSLUG00000016996	dusp2 (ENSSLUG00000016989)	adra2b (ENSSLUG00000016980)	gpat2 (ENSSLUG00000016968)	FAHD2A (ENSSLUG00000016946)	zgc:152830 (ENSSLUG00000016909)
Cottioidei	ANCESTRAL SPECIES	11	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.a #8	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01030000235339	ENSGT00940000161008.e	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a
Stickleback	MODERN SPECIES	12	DMXL1 (ENSGACG00000006220)	SEMA6A (ENSGACG00000006214)	sema6a (ENSGACG00000006212)	COMMD10 (ENSGACG00000006209)	AP3S1 (ENSGACG00000006172)	cdo1 (ENSGACG00000006149)	ENSGACG00000006143	ENSGACG00000006139	lifra (ENSGACG00000006134)	spef2 (ENSGACG00000006116)	ENSGACG00000006107	pdxp (ENSGACG00000006094)	ENSGACG00000006029 #8	lhfpl2b (ENSGACG00000006024) ##13	scamp1 (ENSGACG00000006008) #14	otpb (ENSGACG00000006004) #22	ENSGACG00000005997	ckmt2a (ENSGACG00000005959)	rasgrf2b (ENSGACG00000005945)	msh3 (ENSGACG00000005927)	ENSGACG00000005923	MYORG (ENSGACG00000005917)	dusp2 (ENSGACG00000005902)	ENSGACG00000005900	gpat2 (ENSGACG00000005887)	FAHD2A (ENSGACG00000005837)	zgc:152830 (ENSGACG00000005772)	pcna (ENSGACG00000005726)	KCNIP3 (ENSGACG00000005703)	SLC23A2 (ENSGACG00000005689)	rassf2a (ENSGACG00000005664)
Lumpfish	MODERN SPECIES	24	SEMA6A (ENSCLMG00005007820)	COMMD10 (ENSCLMG00005007817)	AP3S1 (ENSCLMG00005007810)	cdo1 (ENSCLMG00005007809)	ENSCLMG00005007808	ENSCLMG00005007807	ENSCLMG00005007805	ENSCLMG00005007804	ENSCLMG00005007801	pdxp (ENSCLMG00005007773)	mrps36 (ENSCLMG00005007770)	ENSCLMG00005007768 #8	ENSCLMG00005007748 #8	ENSCLMG00005007746 ##13	SCAMP1 (ENSCLMG00005007744) #14	otpb (ENSCLMG00005007743) #22	ENSCLMG00005007742	ENSCLMG00005007741	ckmt2a (ENSCLMG00005007740)	rasgrf2b (ENSCLMG00005007737)	msh3 (ENSCLMG00005004567)	ENSCLMG00005004307	ENSCLMG00005004295	MYORG (ENSCLMG00005004283)	dusp2 (ENSCLMG00005004273)	adra2b (ENSCLMG00005004258)	gpat2 (ENSCLMG00005004253)	FAHD2A (ENSCLMG00005017509)	zgc:152830 (ENSCLMG00005017504)	pcna (ENSCLMG00005017503)	ENSCLMG00005017502
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000181535	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01100000263927.a	ENSGT00940000161008.e	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a
Gilthead seabream	MODERN SPECIES	19	hsd17b4 (ENSSAUG00010007479)	DMXL1 (ENSSAUG00010007451)	sema6a (ENSSAUG00010005307)	COMMD10 (ENSSAUG00010005240)	AP3S1 (ENSSAUG00010005237)	cdo1 (ENSSAUG00010005231)	CEP78 (ENSSAUG00010005227)	ENSSAUG00010005225	spef2 (ENSSAUG00010005223)	ENSSAUG00010005220	pdxp (ENSSAUG00010005219)	mrps36 (ENSSAUG00010005217)	ENSSAUG00010005094 #8	ENSSAUG00010005078 ##13	scamp1 (ENSSAUG00010005069) #14	otpb (ENSSAUG00010005060) #22	ENSSAUG00010005057	ckmt2a (ENSSAUG00010005054)	rasgrf2b (ENSSAUG00010004967)	msh3 (ENSSAUG00010004740)	ENSSAUG00010004713	ENSSAUG00010004710	ENSSAUG00010004708	ENSSAUG00010004706	MYORG (ENSSAUG00010004704)	dusp2 (ENSSAUG00010004702)	adra2b (ENSSAUG00010004701)	gpat2 (ENSSAUG00010004696)	FAHD2A (ENSSAUG00010004692)	zgc:152830 (ENSSAUG00010004686)	PCNA (ENSSAUG00010004680)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	9	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00390000013287	ENSGT00940000165259.b	ENSGT00390000008160	ENSGT00940000181535	ENSGT00940000161263	ENSGT00940000162045	ENSGT00390000017443	ENSGT00390000003122.a.a.b.b #8	ENSGT00990000203589.b.a ##13	ENSGT00940000157310.h #14	ENSGT00940000159952.a.a #22	ENSGT00390000001362.a	ENSGT00940000177396	ENSGT00950000182772.B.a.a.h	ENSGT00940000155679.c	ENSGT00550000074949	ENSGT01070000253853	ENSGT01100000263927.a	ENSGT00940000161008.e	ENSGT00940000161605	ENSGT00940000161915.a	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00530000063255.C	ENSGT00390000004965	ENSGT00940000158782.d.a
European seabass	MODERN SPECIES	13	ENSDLAG00005020484	ENSDLAG00005020554	DMXL1 (ENSDLAG00005022646)	ENSDLAG00005023462	COMMD10 (ENSDLAG00005023741)	ENSDLAG00005033965	ENSDLAG00005030923	ENSDLAG00005023770	ENSDLAG00005023778	ENSDLAG00005023814	ENSDLAG00005033051	ENSDLAG00005023863	ENSDLAG00005023874 #8	ENSDLAG00005028977 ##13	ENSDLAG00005031263 #14	otpb (ENSDLAG00005024016) #22	ENSDLAG00005024019	CKMT2 (ENSDLAG00005024026)	rasgrf2b (ENSDLAG00005024104)	MSH3 (ENSDLAG00005024340)	ENSDLAG00005024511	ENSDLAG00005032572	ENSDLAG00005026851	ENSDLAG00005024521	ENSDLAG00005024525	dusp2 (ENSDLAG00005032250)	adra2b (ENSDLAG00005033177)	gpat2 (ENSDLAG00005024535)	FAHD2A (ENSDLAG00005024557)	zgc:152830 (ENSDLAG00005024558)	ENSDLAG00005024572
Large yellow croaker	MODERN SPECIES	2	agpat9l (ENSLCRG00005011020)	myl7 (ENSLCRG00005011094)	gck (ENSLCRG00005011103)	ykt6 (ENSLCRG00005011264)	ENSLCRG00005011267	ENSLCRG00005011268	ENSLCRG00005011269	utp15 (ENSLCRG00005011271)	ENSLCRG00005011280	ENSLCRG00005011282	PRADC1 (ENSLCRG00005011382)	ENSLCRG00005011386	ENSLCRG00005011410 #8	ENSLCRG00005011443 ##13	scamp1 (ENSLCRG00005011448) #14	otpb (ENSLCRG00005011453) #22	ENSLCRG00005011458	ENSLCRG00005011461	ckmt2a (ENSLCRG00005011463)	rasgrf2b (ENSLCRG00005011501)	msh3 (ENSLCRG00005013001)	ENSLCRG00005013297	ENSLCRG00005013300	MYORG (ENSLCRG00005013305)	dusp2 (ENSLCRG00005013307)	adra2b (ENSLCRG00005013308)	gpat2 (ENSLCRG00005013309)	FAHD2A (ENSLCRG00005013311)	zgc:152830 (ENSLCRG00005013314)	pcna (ENSLCRG00005013316)	KCNIP3 (ENSLCRG00005013318)
Tiger tail seahorse	MODERN SPECIES	67	hsd17b4 (ENSHCOG00000005227)	DMXL1 (ENSHCOG00000005176)	sema6a (ENSHCOG00000000134)	COMMD10 (ENSHCOG00000005012)	AP3S1 (ENSHCOG00000005009)	cdo1 (ENSHCOG00000005004)	ENSHCOG00000004988	ENSHCOG00000004970	ENSHCOG00000004955	ENSHCOG00000004911	pdxp (ENSHCOG00000004890)	mrps36 (ENSHCOG00000004884)	ENSHCOG00000004874 #8	lhfpl2b (ENSHCOG00000004860) ##13	scamp1 (ENSHCOG00000004850) #14	otpb (ENSHCOG00000004816) #22	ENSHCOG00000004796	rasgrf2b (ENSHCOG00000004705)	msh3 (ENSHCOG00000004638)	MYORG (ENSHCOG00000004570)	dusp2 (ENSHCOG00000004542)	adra2b (ENSHCOG00000004535)	gpat2 (ENSHCOG00000004528)	fahd2a (ENSHCOG00000004493)	zgc:152830 (ENSHCOG00000000122)	pcna (ENSHCOG00000004442)	KCNIP3 (ENSHCOG00000004421)	SLC23A2 (ENSHCOG00000004401)	rassf2a (ENSHCOG00000004376)	ENSHCOG00000004307	ptger4a (ENSHCOG00000004298)
Pinecone sodierfish	MODERN SPECIES	23	DMXL1 (ENSMMDG00005022129)	sema6a (ENSMMDG00005022151)	COMMD10 (ENSMMDG00005022267)	AP3S1 (ENSMMDG00005022269)	cdo1 (ENSMMDG00005022271)	CEP78 (ENSMMDG00005022273)	lifra (ENSMMDG00005022279)	spef2 (ENSMMDG00005022298)	ENSMMDG00005022301	pdxp (ENSMMDG00005022302)	mrps36 (ENSMMDG00005022303)	ENSMMDG00005022308 #8	ENSMMDG00005022334 #8	ENSMMDG00005022335 ##13	scamp1 (ENSMMDG00005001099) #14	otpb (ENSMMDG00005001102) #22	ENSMMDG00005001106	ENSMMDG00005001112	ckmt2a (ENSMMDG00005001115)	rasgrf2b (ENSMMDG00005001125)	ENSMMDG00005001137	msh3 (ENSMMDG00005001314)	ENSMMDG00005003661	MYORG (ENSMMDG00005003664)	dusp2 (ENSMMDG00005003670)	adra2b (ENSMMDG00005003672)	gpat2 (ENSMMDG00005003680)	FAHD2A (ENSMMDG00005003694)	zgc:152830 (ENSMMDG00005003702)	pcna (ENSMMDG00005003712)	KCNIP3 (ENSMMDG00005003716)
Cod	MODERN SPECIES	19	ENSGMOG00000007377	DMXL1 (ENSGMOG00000007336)	ENSGMOG00000007329	COMMD10 (ENSGMOG00000007318)	ENSGMOG00000007312	ENSGMOG00000007304	ENSGMOG00000036024	ENSGMOG00000007261	ENSGMOG00000007234	ENSGMOG00000007225	ENSGMOG00000007223	ENSGMOG00000007220	ENSGMOG00000007199 #8	ENSGMOG00000022714 ##13	ENSGMOG00000007187 #14	otpb (ENSGMOG00000025104) #22	ENSGMOG00000007175	CKMT2 (ENSGMOG00000007164)	ENSGMOG00000007143	MSH3 (ENSGMOG00000007132)	ENSGMOG00000033807	ENSGMOG00000000978	ENSGMOG00000022634	dusp2 (ENSGMOG00000000967)	adra2b (ENSGMOG00000000928)	gpat2 (ENSGMOG00000013847)	fahd2a (ENSGMOG00000013816)	zgc:152830 (ENSGMOG00000013768)	ENSGMOG00000013749	ENSGMOG00000013732	ENSGMOG00000013702
Protacanthopterygii	ANCESTRAL SPECIES	257													ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a #22
Salmoninae	ANCESTRAL SPECIES	200	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000155852	ENSGT00940000159786.b	ENSGT00940000155798	ENSGT00390000001485	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a #22	ENSGT00940000157089.B.j	ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k
Salmoninae_a	ANCESTRAL SPECIES	47	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000155852	ENSGT00940000159786.b	ENSGT00940000155798	ENSGT00390000001485	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a #22	ENSGT00940000177848.b	ENSGT00940000157089.B.j	ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k	ENSGT00940000154963.g.a.a	ENSGT00940000156825.i	ENSGT00940000164669.e	ENSGT00940000158565.r	ENSGT00940000153561.b.a.a.b.y.b.b	ENSGT00940000163916.p.b	ENSGT00950000182839.B.b.a.c	ENSGT00940000157462.C.c.a.i	ENSGT00940000157661.e.b.h	ENSGT00940000161238.l.c
Salmo	ANCESTRAL SPECIES	30	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000155852	ENSGT00940000159786.b	ENSGT00940000155798	ENSGT00390000001485	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a #22	ENSGT00940000177848.b	ENSGT00940000157089.B.j	ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k	ENSGT00940000154963.g.a.a	ENSGT00940000156825.i	ENSGT00940000164669.e	ENSGT00940000158565.r	ENSGT00940000153561.b.a.a.b.y.b.b	ENSGT00960000187709	ENSGT00950000182839.B.b.a.c	ENSGT00940000157462.C.c.a.i	ENSGT00940000157661.e.b.h	ENSGT00940000161238.l.c
Atlantic salmon	MODERN SPECIES	18	CEP120 (ENSSSAG00000065138)	PRDM6 (ENSSSAG00000065176)	PPIC (ENSSSAG00000065198)	snx2 (ENSSSAG00000065248)	sncaip (ENSSSAG00000065341)	ENSSSAG00000065346	ENSSSAG00000088671	ENSSSAG00000109713	ENSSSAG00000065358	cmya5 (ENSSSAG00000121490)	ENSSSAG00000090027	ENSSSAG00000120104	tent2 (ENSSSAG00000105442)	ENSSSAG00000091228	homer1 (ENSSSAG00000065561)	otpb (ENSSSAG00000065781) #22	ENSSSAG00000122028	ENSSSAG00000065784	ENSSSAG00000105171	ENSSSAG00000065807	ENSSSAG00000115174	ENSSSAG00000066206	ENSSSAG00000071775	slc6a5 (ENSSSAG00000072543)	prmt3 (ENSSSAG00000072690)	ENSSSAG00000098754	ENSSSAG00000072744	ENSSSAG00000104665	ENSSSAG00000088498	ENSSSAG00000073025	rassf7 (ENSSSAG00000073026)
River trout	MODERN SPECIES	21	nudt12 (ENSSTUG00000031985)	SLC12A2 (ENSSTUG00000020425)	ZNF608 (ENSSTUG00000019950)	CEP120 (ENSSTUG00000019828)	PRDM6 (ENSSTUG00000019801)	PPIC (ENSSTUG00000019755)	SNX2 (ENSSTUG00000019638)	sncaip (ENSSTUG00000019613)	ankrd34bb (ENSSTUG00000019564)	ENSSTUG00000019545	ENSSTUG00000019415	cmya5 (ENSSTUG00000019292)	tent2 (ENSSTUG00000019077)	homer1b (ENSSTUG00000019033)	ENSSTUG00000019023	otpb (ENSSTUG00000019011) #22	ENSSTUG00000018997	MAPK8IP1 (ENSSTUG00000018959)	lrp4 (ENSSTUG00000018050)	ENSSTUG00000017807	NELL1 (ENSSTUG00000016334)	slc6a5 (ENSSTUG00000015956)	prmt3 (ENSSTUG00000015845)	slc39a1 (ENSSTUG00000015833)	CTTN (ENSSTUG00000015533)	ENSSTUG00000015519	ENSSTUG00000015498	ENSSTUG00000015490	rassf7b (ENSSTUG00000015487)	BRSK2 (ENSSTUG00000014505)	ABTB2 (ENSSTUG00000014441)
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00550000074618.b	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000155852	ENSGT00940000155798	ENSGT00390000001485	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a #22	ENSGT00940000177848.b	ENSGT00940000157089.B.j	ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k	ENSGT00940000154963.g.a.a	ENSGT00940000156825.i	ENSGT00940000164669.e	ENSGT00940000158565.r	ENSGT00940000153561.b.a.a.b.y.b.b	ENSGT00940000163916.p.b	ENSGT00950000182839.B.b.a.c	ENSGT00940000157462.C.c.a.i	ENSGT00940000157661.e.b.h	ENSGT00940000161238.l.c
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00550000074618.b	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000155852	ENSGT00940000155798	ENSGT00390000001485	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a #22	ENSGT00940000177848.b	ENSGT00940000157089.B.j	ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k	ENSGT00940000154963.g.a.a	ENSGT00940000156825.i	ENSGT00940000164669.e	ENSGT00940000158565.r	ENSGT00940000153561.b.a.a.b.y.b.b	ENSGT00940000163916.p.b	ENSGT00950000182839.B.b.a.c	ENSGT00940000157462.C.c.a.i	ENSGT00940000157661.e.b.h	ENSGT00940000161238.l.c
Coho salmon	MODERN SPECIES	22	nudt12 (ENSOKIG00005008904)	ENSOKIG00005009467	ZNF608 (ENSOKIG00005019661)	CEP120 (ENSOKIG00005019683)	PRDM6 (ENSOKIG00005019721)	SNX2 (ENSOKIG00005019761)	sncaip (ENSOKIG00005019875)	ENSOKIG00005019886	ankrd34bb (ENSOKIG00005020096)	ENSOKIG00005020116	ENSOKIG00005020179	cmya5 (ENSOKIG00005020228)	tent2 (ENSOKIG00005020289)	homer1b (ENSOKIG00005020851)	ENSOKIG00005000007	otpb (ENSOKIG00005000029) #22	ENSOKIG00005000054	MAPK8IP1 (ENSOKIG00005000068)	lrp4 (ENSOKIG00005000443)	ENSOKIG00005000939	NELL1 (ENSOKIG00005001201)	slc6a5 (ENSOKIG00005001966)	prmt3 (ENSOKIG00005002480)	slc39a1 (ENSOKIG00005002802)	CTTN (ENSOKIG00005002872)	ENSOKIG00005003325	ENSOKIG00005003330	rassf7b (ENSOKIG00005003332)	BRSK2 (ENSOKIG00005003392)	ABTB2 (ENSOKIG00005003513)	ENSOKIG00005003542
Chinook salmon	MODERN SPECIES	28	nudt12 (ENSOTSG00005007928)	SLC12A2 (ENSOTSG00005007958)	ENSOTSG00005025970	ZNF608 (ENSOTSG00005025973)	CEP120 (ENSOTSG00005025977)	PRDM6 (ENSOTSG00005026012)	SNX2 (ENSOTSG00005026019)	sncaip (ENSOTSG00005026032)	ankrd34bb (ENSOTSG00005026039)	ENSOTSG00005026040	ENSOTSG00005026041	ENSOTSG00005026042	cmya5 (ENSOTSG00005026044)	tent2 (ENSOTSG00005026045)	homer1b (ENSOTSG00005026119)	otpb (ENSOTSG00005026123) #22	ENSOTSG00005026124	lrp4 (ENSOTSG00005026127)	ENSOTSG00005026254	NELL1 (ENSOTSG00005026432)	slc6a5 (ENSOTSG00005026444)	prmt3 (ENSOTSG00005026449)	slc39a1 (ENSOTSG00005026450)	CTTN (ENSOTSG00005026451)	ENSOTSG00005026454	ENSOTSG00005026458	ENSOTSG00005026462	rassf7b (ENSOTSG00005026464)	BRSK2 (ENSOTSG00005026467)	ABTB2 (ENSOTSG00005026599)	ENSOTSG00005026602
Rainbow trout	MODERN SPECIES	27	ENSOMYG00000042377	PRDM6 (ENSOMYG00000042436)	ENSOMYG00000042453	ENSOMYG00000042474	ENSOMYG00000029686	ENSOMYG00000001222	ENSOMYG00000001277	ENSOMYG00000001330	ENSOMYG00000001383	cmya5 (ENSOMYG00000059165)	tent2 (ENSOMYG00000001690)	ENSOMYG00000065004	homer1b (ENSOMYG00000001923)	ENSOMYG00000049056	ENSOMYG00000002004	otpb (ENSOMYG00000002018) #22	ENSOMYG00000002051	ENSOMYG00000002102	ENSOMYG00000002959	ENSOMYG00000073180	ENSOMYG00000065020	ENSOMYG00000004181	ENSOMYG00000005965	slc6a5 (ENSOMYG00000008086)	prmt3 (ENSOMYG00000008629)	ENSOMYG00000008738	ENSOMYG00000009421	ENSOMYG00000077344	ENSOMYG00000074580	ENSOMYG00000011052	rassf7b (ENSOMYG00000011058)
Huchen	MODERN SPECIES	28														tent2 (ENSHHUG00000034180)	homer1b (ENSHHUG00000034168)	otpb (ENSHHUG00000034160) #22	lemd1 (ENSHHUG00000034147)	MAPK8IP1 (ENSHHUG00000034135)	lrp4 (ENSHHUG00000033926)	ENSHHUG00000033913	ENSHHUG00000033824	ENSHHUG00000033813	ENSHHUG00000033785
Northern pike	MODERN SPECIES	12	ENSELUG00000029596	ENSELUG00000010027	ENSELUG00000001695	ENSELUG00000032286	ENSELUG00000026693	ENSELUG00000028436	ENSELUG00000029473	ENSELUG00000034030	ENSELUG00000029402	ENSELUG00000027224	cmya5 (ENSELUG00000001671)	homer1b (ENSELUG00000001669)	ENSELUG00000033578	ENSELUG00000031424	ENSELUG00000024272	otpb (ENSELUG00000024238) #22	msh3 (ENSELUG00000024211)	SURF4 (ENSELUG00000023867)	dnm1b (ENSELUG00000016137)	ENSELUG00000016245	ENSELUG00000001639	ENSELUG00000025114	pappab (ENSELUG00000012981)	ENSELUG00000012948	QSOX2 (ENSELUG00000020218)	ENSELUG00000020198	plpp7a (ENSELUG00000004335)	edf1 (ENSELUG00000027628)	ENSELUG00000004426	ENSELUG00000021057	snap29 (ENSELUG00000033429)
Osteoglossiformes	ANCESTRAL SPECIES	39																ENSGT00940000159952.a.a #22	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.b.g	ENSGT00950000183076.a.b.a	ENSGT00950000182940.b.b.g	ENSGT00940000154170.A	ENSGT00940000156667	ENSGT00940000155123.b	ENSGT00940000155305	ENSGT00940000159721.f	ENSGT00510000048902.a.g	ENSGT00390000018706	ENSGT00550000074890	ENSGT00390000008107.c.a	ENSGT00950000182983.B.a.b	ENSGT00940000155831
Asian bonytongue	MODERN SPECIES	8	erap2 (ENSSFOG00015005949)	ERAP2 (ENSSFOG00015005906)	lnpep (ENSSFOG00015005868)	ccdc65 (ENSSFOG00015005750)	slc14a2 (ENSSFOG00015005736)	SETBP1 (ENSSFOG00015005729)	cdk7 (ENSSFOG00015005692)	serinc5 (ENSSFOG00015005644)	thbs4a (ENSSFOG00015005554)	mtx3 (ENSSFOG00015005510)	cmya5 (ENSSFOG00015005457)	homer1b (ENSSFOG00015005422)	JMY (ENSSFOG00015005414) #7	LHFPL2 (ENSSFOG00015005391) #13	scamp1 (ENSSFOG00015005381) #14	otpb (ENSSFOG00015023483) #22	f2rl1.2 (ENSSFOG00015033232)	f2r (ENSSFOG00015023476)	iqgap2 (ENSSFOG00015023423)	sv2ca (ENSSFOG00015023367)	ANKDD1B (ENSSFOG00015023354)	POLK (ENSSFOG00015023341)	CERT1 (ENSSFOG00015023300)	ENSSFOG00015030013	GCNT4 (ENSSFOG00015023290)	ENSSFOG00015030378	ENC1 (ENSSFOG00015031976)	btf3 (ENSSFOG00015031532)	mrps27 (ENSSFOG00015023271)	MAP1B (ENSSFOG00015023262)	ptger4a (ENSSFOG00015027210)
P. kingsleyae	MODERN SPECIES	548																OTP (ENSPKIG00000011167) #22	f2rl1.2 (ENSPKIG00000011155)	f2r (ENSPKIG00000011142)	ENSPKIG00000011129	iqgap2 (ENSPKIG00000011077)	sv2ca (ENSPKIG00000011027)
Osteoglossocephalai	ANCESTRAL SPECIES	8	ENSGT00940000155179	ENSGT01030000234623.a.b.a	ENSGT00940000155227.b	ENSGT00950000182919.B.b	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354	ENSGT00510000046704.b.a #7	ENSGT00390000003122.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b	ENSGT00950000183076.a.b.a	ENSGT01050000244840.A.b.b	ENSGT00940000174521	ENSGT00950000182940.b.b	ENSGT00940000164571	ENSGT00940000154170.A
Osteoglossiformes	ANCESTRAL SPECIES	83	ENSGT00940000156090.a	ENSGT00390000018729.a.e.h	ENSGT00940000158784.v	ENSGT01030000234623.a.b.a.f	ENSGT00940000155227.a	ENSGT00940000156640	ENSGT00940000156354.m	ENSGT00510000046704.b.a.e #7	ENSGT00390000003122.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b.d #13	ENSGT00940000157310.j #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.h	ENSGT01050000244840.A.b.b	ENSGT00950000182940.b.b.h	ENSGT00940000164571
Asian bonytongue	MODERN SPECIES	21	hwa (ENSSFOG00015025358)	dnajb5 (ENSSFOG00015017075)	SETBP1 (ENSSFOG00015017063)	serinc5 (ENSSFOG00015017025)	thbs4b (ENSSFOG00015016974)	tent2 (ENSSFOG00015016954)	homer1b (ENSSFOG00015016907)	JMY (ENSSFOG00015016891) #7	bhmt (ENSSFOG00015016840) #8	DMGDH (ENSSFOG00015016787) #10	ARSB (ENSSFOG00015016765) #11	lhfpl2a (ENSSFOG00015031014) #13	SCAMP1 (ENSSFOG00015016716) #14	AP3B1 (ENSSFOG00015016624) #17	tbca (ENSSFOG00015030159) #21	otpa (ENSSFOG00015016563) #22	wdr41 (ENSSFOG00015016506)	PDE8B (ENSSFOG00015016473)	aggf1 (ENSSFOG00015016459)	crhbp (ENSSFOG00015016445)	s100z (ENSSFOG00015016441)	ENSSFOG00015016427	ch25hl2 (ENSSFOG00015028366)	f2rl1.1 (ENSSFOG00015016419)	F2R (ENSSFOG00015028768)	F2RL2 (ENSSFOG00015029501)	SV2C (ENSSFOG00015016383)	ENSSFOG00015016366	ENSSFOG00015016294	hmgcra (ENSSFOG00015016250)	GCNT4 (ENSSFOG00015016238)
P. kingsleyae	MODERN SPECIES	2	dnajb5 (ENSPKIG00000017272)	ENSPKIG00000017306	SETBP1 (ENSPKIG00000017335)	serinc5 (ENSPKIG00000017366)	thbs4b (ENSPKIG00000017424)	tent2 (ENSPKIG00000017504)	homer1b (ENSPKIG00000017568)	JMY (ENSPKIG00000017638) #7	bhmt (ENSPKIG00000017692) #8	DMGDH (ENSPKIG00000017764) #10	ARSB (ENSPKIG00000017800) #11	lhfpl2a (ENSPKIG00000017855) #13	SCAMP1 (ENSPKIG00000017903) #14	AP3B1 (ENSPKIG00000017939) #17	tbca (ENSPKIG00000018004) #21	otpa (ENSPKIG00000018024) #22	wdr41 (ENSPKIG00000018046)	PDE8B (ENSPKIG00000018112)	aggf1 (ENSPKIG00000018193)	crhbp (ENSPKIG00000018218)	s100z (ENSPKIG00000018247)	ENSPKIG00000018266	ch25hl2 (ENSPKIG00000018280)	f2rl1.2 (ENSPKIG00000018301)	f2rl1.1 (ENSPKIG00000018310)	f2rl1.1 (ENSPKIG00000018318)	f2rl1.2 (ENSPKIG00000018335)	F2R (ENSPKIG00000018365)	F2RL2 (ENSPKIG00000018396)	SV2C (ENSPKIG00000018429)	ENSPKIG00000018484
Clupeocephala	ANCESTRAL SPECIES	160						ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00510000048902.a.f
Euteleosteomorpha	ANCESTRAL SPECIES	53	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00510000048902.a.f
Acanthomorphata	ANCESTRAL SPECIES	15	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.b #22	ENSGT00940000170540	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Euacanthomorphacea	ANCESTRAL SPECIES	12	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Pinecone sodierfish	MODERN SPECIES	3	NUP188 (ENSMMDG00005006589)	ENSMMDG00005006552	ZNF703 (ENSMMDG00005006551)	C2orf42 (ENSMMDG00005006502)	DTWD2 (ENSMMDG00005006498)	HOMER1 (ENSMMDG00005006456)	JMY (ENSMMDG00005006450) #7	bhmt (ENSMMDG00005006407) #8	bhmt (ENSMMDG00005006373) #8	DMGDH (ENSMMDG00005006293) #10	ARSB (ENSMMDG00005006283) #11	lhfpl2a (ENSMMDG00005006275) #13	scamp1 (ENSMMDG00005006270) #14	AP3B1 (ENSMMDG00005005969) #17	tbca (ENSMMDG00005005944) #21	otpa (ENSMMDG00005005938) #22	wdr41 (ENSMMDG00005005908)	PDE8B (ENSMMDG00005005550)	crhbp (ENSMMDG00005005426)	s100z (ENSMMDG00005005417)	ch25hl2 (ENSMMDG00005005410)	f2rl1.2 (ENSMMDG00005005408)	f2rl1.1 (ENSMMDG00005005405)	f2r2.1 (ENSMMDG00005005400)	F2RL2 (ENSMMDG00005005395)	SV2C (ENSMMDG00005004990)	CERT1 (ENSMMDG00005004619)	hmgcrb (ENSMMDG00005004551)	GCNT4 (ENSMMDG00005004536)	lhx5 (ENSMMDG00005004528)	mzt2b (ENSMMDG00005004523)
Percomorphaceae	ANCESTRAL SPECIES	16	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Percomorphaceae_B	ANCESTRAL SPECIES	16	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000169994	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Percomorphaceae_C	ANCESTRAL SPECIES	17	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000169994	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Eupercaria	ANCESTRAL SPECIES	13	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000169994	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Tetraodontidae	ANCESTRAL SPECIES	19	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.a.g	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Tetraodon	MODERN SPECIES	19	srek1 (ENSTNIG00000013463)	ENSTNIG00000013464	ENSTNIG00000013465	TRAF2 (ENSTNIG00000013466)	ENSTNIG00000013467	ZNF703 (ENSTNIG00000013468)	C2orf42 (ENSTNIG00000013469)	tia1 (ENSTNIG00000013470)	DTWD2 (ENSTNIG00000013471)	ENSTNIG00000013472	JMY (ENSTNIG00000013473) #7	lhfpl2a (ENSTNIG00000013474) #13	scamp1 (ENSTNIG00000013475) #14	AP3B1 (ENSTNIG00000013476) #17	tbca (ENSTNIG00000000561) #21	otpa (ENSTNIG00000013477) #22	wdr41 (ENSTNIG00000013478)	PDE8B (ENSTNIG00000013479)	crhbp (ENSTNIG00000013480)	s100z (ENSTNIG00000013481)	ch25hl2 (ENSTNIG00000013482)	f2rl1.2 (ENSTNIG00000013483)	ENSTNIG00000000913	F2RL2 (ENSTNIG00000013484)	SV2C (ENSTNIG00000013485)	CERT1 (ENSTNIG00000013486)	hmgcrb (ENSTNIG00000013487)	GCNT4 (ENSTNIG00000013488)	lhx5 (ENSTNIG00000013489)	trim23 (ENSTNIG00000013490)	ppwd1 (ENSTNIG00000013491)
Fugu	MODERN SPECIES	18	TRAF2 (ENSTRUG00000006395)	ENSTRUG00000006122	C2orf42 (ENSTRUG00000025901)	tia1 (ENSTRUG00000005456)	DTWD2 (ENSTRUG00000005327)	HOMER1 (ENSTRUG00000004898)	JMY (ENSTRUG00000027651) #7	bhmt (ENSTRUG00000004203) #8	DMGDH (ENSTRUG00000003979) #10	ARSB (ENSTRUG00000003412) #11	ENSTRUG00000026160	lhfpl2a (ENSTRUG00000022518) #13	scamp1 (ENSTRUG00000018272) #14	AP3B1 (ENSTRUG00000018286) #17	tbca (ENSTRUG00000018312) #21	otpa (ENSTRUG00000018317) #22	wdr41 (ENSTRUG00000018319)	PDE8B (ENSTRUG00000018324)	crhbp (ENSTRUG00000018344)	s100z (ENSTRUG00000029087)	ch25hl2 (ENSTRUG00000018350)	f2rl1.2 (ENSTRUG00000025409)	f2rl1.1 (ENSTRUG00000018352)	SV2C (ENSTRUG00000018362)	F2RL2 (ENSTRUG00000027056)	CERT1 (ENSTRUG00000018369)	hmgcrb (ENSTRUG00000018375)	GCNT4 (ENSTRUG00000018386)	lhx5 (ENSTRUG00000018387)	mzt2b (ENSTRUG00000020389)	trim23 (ENSTRUG00000018393)
Eupecaria_A	ANCESTRAL SPECIES	14	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000169994	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Ballan wrasse	MODERN SPECIES	528												ENSLBEG00000026912 #17	AP3B1 (ENSLBEG00000026927) #17	tbca (ENSLBEG00000026946) #21	ENSLBEG00000026976	otpa (ENSLBEG00000027017) #22	wdr41 (ENSLBEG00000027031)	PDE8B (ENSLBEG00000027056)	crhbp (ENSLBEG00000027080)	s100z (ENSLBEG00000027087)	ch25hl2 (ENSLBEG00000027095)	f2rl1.2 (ENSLBEG00000027102)	f2rl1.1 (ENSLBEG00000027106)	F2R (ENSLBEG00000027117)	F2R (ENSLBEG00000027145)	F2RL2 (ENSLBEG00000027190)	SV2C (ENSLBEG00000027198)
Eupecaria_B	ANCESTRAL SPECIES	14	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000169994	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Perciformes	ANCESTRAL SPECIES	16	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000169994	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Cottioidei	ANCESTRAL SPECIES	33	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000169994	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.a.a.g	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328
Stickleback	MODERN SPECIES	13	TRAF2 (ENSGACG00000015808)	ENSGACG00000015806	ENSGACG00000015804	ZNF703 (ENSGACG00000015803)	C2orf42 (ENSGACG00000015801)	tia1 (ENSGACG00000015800)	DTWD2 (ENSGACG00000015793)	ENSGACG00000015792	HOMER1 (ENSGACG00000015784)	JMY (ENSGACG00000015780) #7	bhmt (ENSGACG00000015778) #8	DMGDH (ENSGACG00000015777) #10	ARSB (ENSGACG00000015775) #11	AP3B1 (ENSGACG00000015772) #17	tbca (ENSGACG00000015771) #21	otpa (ENSGACG00000015770) #22	wdr41 (ENSGACG00000015762)	PDE8B (ENSGACG00000015761)	crhbp (ENSGACG00000015759)	s100z (ENSGACG00000015758)	ch25hl2 (ENSGACG00000015757)	f2rl1.2 (ENSGACG00000015756)	ENSGACG00000015755	F2RL2 (ENSGACG00000015753)	SV2C (ENSGACG00000015751)	CERT1 (ENSGACG00000015744)	hmgcrb (ENSGACG00000015741)	GCNT4 (ENSGACG00000015737)	mzt2b (ENSGACG00000015736)	trim23 (ENSGACG00000015730)	ppwd1 (ENSGACG00000015717)
Lumpfish	MODERN SPECIES	3	TRAF2 (ENSCLMG00005010822)	ENSCLMG00005010821	ZNF703 (ENSCLMG00005010820)	C2orf42 (ENSCLMG00005010818)	tia1 (ENSCLMG00005010569)	ENSCLMG00005010565	HOMER1 (ENSCLMG00005010119)	JMY (ENSCLMG00005010111) #7	bhmt (ENSCLMG00005010092) #8	DMGDH (ENSCLMG00005010089) #10	ARSB (ENSCLMG00005010086) #11	lhfpl2a (ENSCLMG00005010085) #13	scamp1 (ENSCLMG00005010083) #14	AP3B1 (ENSCLMG00005004891) #17	tbca (ENSCLMG00005004813) #21	otpa (ENSCLMG00005004607) #22	wdr41 (ENSCLMG00005004503)	PDE8B (ENSCLMG00005004331)	crhbp (ENSCLMG00005004294)	s100z (ENSCLMG00005019510)	ch25hl2 (ENSCLMG00005019509)	f2rl1.2 (ENSCLMG00005019508)	f2rl1.1 (ENSCLMG00005019507)	f2r2.1 (ENSCLMG00005019506)	SV2C (ENSCLMG00005019494)	CERT1 (ENSCLMG00005018833)	hmgcrb (ENSCLMG00005018721)	GCNT4 (ENSCLMG00005018715)	lhx5 (ENSCLMG00005018712)	mzt2b (ENSCLMG00005018711)	trim23 (ENSCLMG00005018578)
Perciformes_a	ANCESTRAL SPECIES	12	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Pike perch	MODERN SPECIES	33	TRAF2 (ENSSLUG00000010998)	ENSSLUG00000011008	ZNF703 (ENSSLUG00000011019)	C2orf42 (ENSSLUG00000011023)	tia1 (ENSSLUG00000011052)	DTWD2 (ENSSLUG00000011320)	HOMER1 (ENSSLUG00000011333)	JMY (ENSSLUG00000011567) #7	bhmt (ENSSLUG00000011582) #8	DMGDH (ENSSLUG00000011623) #10	ARSB (ENSSLUG00000011744) #11	lhfpl2a (ENSSLUG00000011761) #13	scamp1 (ENSSLUG00000011766) #14	AP3B1 (ENSSLUG00000011801) #17	tbca (ENSSLUG00000011926) #21	otpa (ENSSLUG00000011935) #22	wdr41 (ENSSLUG00000011958)	PDE8B (ENSSLUG00000012130)	crhbp (ENSSLUG00000012137)	s100z (ENSSLUG00000012144)	ch25hl2 (ENSSLUG00000012148)	f2rl1.2 (ENSSLUG00000012151)	f2rl1.1 (ENSSLUG00000012154)	f2rl1.1 (ENSSLUG00000012156)	f2rl1.1 (ENSSLUG00000012162)	f2r2.1 (ENSSLUG00000012165)	F2RL2 (ENSSLUG00000012168)	SV2C (ENSSLUG00000012183)	CERT1 (ENSSLUG00000012625)	hmgcrb (ENSSLUG00000014926)	GCNT4 (ENSSLUG00000015667)
Channel bull blenny	MODERN SPECIES	3	ENSCGOG00000019775	ZNF703 (ENSCGOG00000019774)	C2orf42 (ENSCGOG00000019773)	tia1 (ENSCGOG00000019535)	DTWD2 (ENSCGOG00000019527)	HOMER1 (ENSCGOG00000019507)	ENSCGOG00000019503	JMY (ENSCGOG00000019494) #7	bhmt (ENSCGOG00000019370) #8	DMGDH (ENSCGOG00000018919) #10	ARSB (ENSCGOG00000018860) #11	lhfpl2a (ENSCGOG00000018856) #13	scamp1 (ENSCGOG00000018847) #14	AP3B1 (ENSCGOG00000018679) #17	tbca (ENSCGOG00000018671) #21	otpa (ENSCGOG00000018661) #22	wdr41 (ENSCGOG00000018568)	PDE8B (ENSCGOG00000017917)	crhbp (ENSCGOG00000017890)	s100z (ENSCGOG00000017887)	f2rl1.2 (ENSCGOG00000017882)	f2rl1.1 (ENSCGOG00000017880)	f2r2.1 (ENSCGOG00000017879)	ENSCGOG00000017878	SV2C (ENSCGOG00000017410)	CERT1 (ENSCGOG00000016569)	hmgcrb (ENSCGOG00000016256)	GCNT4 (ENSCGOG00000016250)	lhx5 (ENSCGOG00000016241)	mzt2b (ENSCGOG00000016240)	trim23 (ENSCGOG00000016037)
Eupecaria_C	ANCESTRAL SPECIES	9	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125.n	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Gilthead seabream	MODERN SPECIES	3	HOMER1 (ENSSAUG00010011189)	JMY (ENSSAUG00010011187) #7	ENSSAUG00010011186	ENSSAUG00010011184	ENSSAUG00010011182	ENSSAUG00010011179	ENSSAUG00010011175	bhmt (ENSSAUG00010011150) #8	DMGDH (ENSSAUG00010009189) #10	ARSB (ENSSAUG00010009148) #11	lhfpl2a (ENSSAUG00010009145) #13	scamp1 (ENSSAUG00010009142) #14	AP3B1 (ENSSAUG00010009064) #17	ENSSAUG00010009054	tbca (ENSSAUG00010009050) #21	otpa (ENSSAUG00010009047) #22	wdr41 (ENSSAUG00010008792)	ENSSAUG00010008789	ENSSAUG00010008788	crhbp (ENSSAUG00010008786)	s100z (ENSSAUG00010008785)	ch25hl2 (ENSSAUG00010008783)	PDE8B (ENSSAUG00010005798)	f2rl1.2 (ENSSAUG00010005746)	ENSSAUG00010005745	f2rl1.1 (ENSSAUG00010005743)	F2R (ENSSAUG00010005740)	F2R (ENSSAUG00010005737)	F2R (ENSSAUG00010005734)	F2R (ENSSAUG00010005733)	F2R (ENSSAUG00010005731)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	6	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125.n	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Large yellow croaker	MODERN SPECIES	4	ZNF703 (ENSLCRG00005013609)	ENSLCRG00005013608	C2orf42 (ENSLCRG00005013606)	tia1 (ENSLCRG00005013221)	DTWD2 (ENSLCRG00005013205)	ENSLCRG00005013202	HOMER1 (ENSLCRG00005013125)	JMY (ENSLCRG00005013114) #7	DMGDH (ENSLCRG00005011869) #10	bhmt (ENSLCRG00005011814) #8	ARSB (ENSLCRG00005011801) #11	lhfpl2a (ENSLCRG00005011798) #13	scamp1 (ENSLCRG00005011792) #14	AP3B1 (ENSLCRG00005010933) #17	tbca (ENSLCRG00005010923) #21	otpa (ENSLCRG00005010920) #22	wdr41 (ENSLCRG00005010827)	PDE8B (ENSLCRG00005010781)	crhbp (ENSLCRG00005010764)	ch25hl2 (ENSLCRG00005010760)	s100z (ENSLCRG00005010758)	f2rl1.2 (ENSLCRG00005010757)	f2rl1.1 (ENSLCRG00005010756)	f2r2.1 (ENSLCRG00005010755)	F2RL2 (ENSLCRG00005010753)	SV2C (ENSLCRG00005010695)	CERT1 (ENSLCRG00005008123)	hmgcrb (ENSLCRG00005007812)	GCNT4 (ENSLCRG00005007802)	lhx5 (ENSLCRG00005007797)	mzt2b (ENSLCRG00005007793)
European seabass	MODERN SPECIES	9	ENSDLAG00005001152	ENSDLAG00005000989	ENSDLAG00005000974	ENSDLAG00005032108	ENSDLAG00005030934	ENSDLAG00005000940	ENSDLAG00005030106	HOMER1 (ENSDLAG00005029240)	JMY (ENSDLAG00005000911) #7	bhmt (ENSDLAG00005000880) #8	DMGDH (ENSDLAG00005000598) #10	ARSB (ENSDLAG00005023776) #11	LHFPL2 (ENSDLAG00005023771) #13	SCAMP1 (ENSDLAG00005034904) #14	AP3B1 (ENSDLAG00005022652) #17	otpa (ENSDLAG00005022587) #22	wdr41 (ENSDLAG00005022564)	PDE8B (ENSDLAG00005022099)	crhbp (ENSDLAG00005022074)	s100z (ENSDLAG00005022069)	ch25hl2 (ENSDLAG00005022068)	f2rl1.2 (ENSDLAG00005022063)	f2r2.1 (ENSDLAG00005022061)	F2RL2 (ENSDLAG00005022059)	SV2C (ENSDLAG00005022048)	CERT1 (ENSDLAG00005021764)	hmgcrb (ENSDLAG00005021232)	GCNT4 (ENSDLAG00005027499)	ENSDLAG00005028991	mzt2b (ENSDLAG00005031291)	ENSDLAG00005013686
Percomorphaceae_D	ANCESTRAL SPECIES	15	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Carangaria	ANCESTRAL SPECIES	17	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Carangaria_A	ANCESTRAL SPECIES	18	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603.n #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Seriola	ANCESTRAL SPECIES	53	ENSGT00950000182815.a.a.b.g	ENSGT00940000157242.a.b	ENSGT00940000163584.a	ENSGT00940000158491.b	ENSGT00390000012762	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603.n #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Greater amberjack	MODERN SPECIES	261	aqp3b (ENSSDUG00000009949)	arid6 (ENSSDUG00000009934)	ENSSDUG00000009911	zgc:162472 (ENSSDUG00000009882)	DTWD2 (ENSSDUG00000009851)	HOMER1 (ENSSDUG00000009802)	JMY (ENSSDUG00000009752) #7	bhmt (ENSSDUG00000009720) #8	DMGDH (ENSSDUG00000009692) #10	ARSB (ENSSDUG00000009672) #11	ENSSDUG00000009661	lhfpl2a (ENSSDUG00000009655) #13	scamp1 (ENSSDUG00000009625) #14	AP3B1 (ENSSDUG00000009565) #17	tbca (ENSSDUG00000009548) #21	otpa (ENSSDUG00000009537) #22	wdr41 (ENSSDUG00000009515)
Yellowtail amberjack	MODERN SPECIES	3042	ankra2 (ENSSLDG00000014857)	btf3 (ENSSLDG00000014843)	foxd1 (ENSSLDG00000014830)	TMEM174 (ENSSLDG00000014821)	fcho2 (ENSSLDG00000014677)	TNPO1 (ENSSLDG00000014578)	HOMER1 (ENSSLDG00000014538)	JMY (ENSSLDG00000014512) #7	bhmt (ENSSLDG00000014491) #8	DMGDH (ENSSLDG00000014440) #10	ARSB (ENSSLDG00000014410) #11	lhfpl2a (ENSSLDG00000014391) #13	scamp1 (ENSSLDG00000014368) #14	AP3B1 (ENSSLDG00000014297) #17	tbca (ENSSLDG00000014269) #21	otpa (ENSSLDG00000014245) #22	wdr41 (ENSSLDG00000014187)	PDE8B (ENSSLDG00000014147)	crhbp (ENSSLDG00000014122)	s100z (ENSSLDG00000014112)	ch25hl2 (ENSSLDG00000014097)	f2rl1.2 (ENSSLDG00000014088)	f2rl1.1 (ENSSLDG00000014079)	f2r2.1 (ENSSLDG00000014072)	F2RL2 (ENSSLDG00000014063)	SV2C (ENSSLDG00000014039)	CERT1 (ENSSLDG00000013970)	hmgcrb (ENSSLDG00000013913)	GCNT4 (ENSSLDG00000013894)	lhx5 (ENSSLDG00000013882)	mzt2b (ENSSLDG00000013865)
Barramundi perch	MODERN SPECIES	552														AP3B1 (ENSLCAG00010010665) #17	tbca (ENSLCAG00010010721) #21	otpa (ENSLCAG00010010724) #22	ENSLCAG00010010726	PDE8B (ENSLCAG00010010752)	crhbp (ENSLCAG00010010809)	s100z (ENSLCAG00010010810)	ch25hl2 (ENSLCAG00010010813)
Pleuronectoidei	ANCESTRAL SPECIES	7	ENSGT00940000155831.cb	ENSGT00950000182983.B.a.b.e	ENSGT00390000008107.c.a	ENSGT00550000074890.f	ENSGT00390000018706	ENSGT00950000182888.a.a.a.e	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Tongue sole	MODERN SPECIES	5	gfm2 (ENSCSEG00000013115)	nsa2 (ENSCSEG00000013161)	tor1 (ENSCSEG00000013176)	HOMER1 (ENSCSEG00000013201)	JMY (ENSCSEG00000013221) #7	bhmt (ENSCSEG00000013233) #8	DMGDH (ENSCSEG00000013250) #10	ARSB (ENSCSEG00000013290) #11	ARSB (ENSCSEG00000013306) #11	ARSB (ENSCSEG00000013315) #11	ARSB (ENSCSEG00000013331) #11	lhfpl2a (ENSCSEG00000013349) #13	scamp1 (ENSCSEG00000013358) #14	AP3B1 (ENSCSEG00000013388) #17	tbca (ENSCSEG00000013428) #21	otpa (ENSCSEG00000013434) #22	wdr41 (ENSCSEG00000013442)	PDE8B (ENSCSEG00000013472)	crhbp (ENSCSEG00000013525)	ENSCSEG00000013544	dab2 (ENSCSEG00000013563)	ENSCSEG00000013623	ENSCSEG00000013677	aqp3b (ENSCSEG00000013694)	unc5da (ENSCSEG00000013713)	tnfrsfa (ENSCSEG00000013782)	trappc13 (ENSCSEG00000013793)	sgtb (ENSCSEG00000013826)	pik3r1 (ENSCSEG00000013846)	MAST4 (ENSCSEG00000013887)	ENSCSEG00000013895
Turbot	MODERN SPECIES	16	ENC1 (ENSSMAG00000011072)	hexb (ENSSMAG00000010849)	gfm2 (ENSSMAG00000010773)	NSA2 (ENSSMAG00000010754)	ENSSMAG00000010704	HOMER1 (ENSSMAG00000010667)	JMY (ENSSMAG00000010657) #7	bhmt (ENSSMAG00000010622) #8	DMGDH (ENSSMAG00000010584) #10	ARSB (ENSSMAG00000010569) #11	LHFPL2 (ENSSMAG00000010559) #13	ENSSMAG00000026772	SCAMP1 (ENSSMAG00000010527) #14	AP3B1 (ENSSMAG00000010503) #17	tbca (ENSSMAG00000010486) #21	otpa (ENSSMAG00000026303) #22	wdr41 (ENSSMAG00000010452)	PDE8B (ENSSMAG00000010435)	crhbp (ENSSMAG00000010424)	s100z (ENSSMAG00000024918)	ch25hl2 (ENSSMAG00000010398)	f2rl1.2 (ENSSMAG00000027655)	f2rl1.1 (ENSSMAG00000010383)	f2r2.1 (ENSSMAG00000030722)	F2RL2 (ENSSMAG00000024561)	SV2C (ENSSMAG00000010339)	ENSSMAG00000010255	GCNT4 (ENSSMAG00000010203)	hmgcrb (ENSSMAG00000010211)	ENSSMAG00000035108	mzt2b (ENSSMAG00000010171)
Anabantaria	ANCESTRAL SPECIES	12	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Zig-zag eel	MODERN SPECIES	3	ENSMAMG00000003521	ENSMAMG00000003553	ENSMAMG00000003619	ENSMAMG00000003651	ENSMAMG00000003680	ENSMAMG00000003747	HOMER1 (ENSMAMG00000024864)	JMY (ENSMAMG00000003843) #7	bhmt (ENSMAMG00000003856) #8	DMGDH (ENSMAMG00000003893) #10	ARSB (ENSMAMG00000003940) #11	LHFPL2 (ENSMAMG00000003982) #13	SCAMP1 (ENSMAMG00000004014) #14	AP3B1 (ENSMAMG00000004074) #17	tbca (ENSMAMG00000004128) #21	otpa (ENSMAMG00000004156) #22	wdr41 (ENSMAMG00000004169)	PDE8B (ENSMAMG00000004204)	crhbp (ENSMAMG00000004254)	s100z (ENSMAMG00000004265)	ch25hl2 (ENSMAMG00000004284)	f2rl1.2 (ENSMAMG00000004294)	f2rl1.1 (ENSMAMG00000004308)	f2r2.1 (ENSMAMG00000027882)	F2RL2 (ENSMAMG00000004316)	SV2C (ENSMAMG00000004324)	CERT1 (ENSMAMG00000004370)	ENSMAMG00000004461	GCNT4 (ENSMAMG00000004514)	ENSMAMG00000004519	mzt2b (ENSMAMG00000004537)
Anabantoidei	ANCESTRAL SPECIES	16	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Siamese fighting fish	MODERN SPECIES	3	ENSBSLG00000004343	ZNF703 (ENSBSLG00000004347)	ENSBSLG00000004349	C2orf42 (ENSBSLG00000004733)	tia1 (ENSBSLG00000004847)	DTWD2 (ENSBSLG00000005111)	HOMER1 (ENSBSLG00000005153)	ENSBSLG00000005349	JMY (ENSBSLG00000005382) #7	bhmt (ENSBSLG00000005481) #8	DMGDH (ENSBSLG00000005714) #10	lhfpl2a (ENSBSLG00000005975) #13	scamp1 (ENSBSLG00000006367) #14	AP3B1 (ENSBSLG00000006839) #17	tbca (ENSBSLG00000007725) #21	otpa (ENSBSLG00000007751) #22	wdr41 (ENSBSLG00000007776)	PDE8B (ENSBSLG00000007946)	crhbp (ENSBSLG00000008673)	s100z (ENSBSLG00000008710)	ch25hl2 (ENSBSLG00000008714)	f2rl1.2 (ENSBSLG00000008716)	f2rl1.1 (ENSBSLG00000008723)	f2r2.1 (ENSBSLG00000008727)	SV2C (ENSBSLG00000008749)	CERT1 (ENSBSLG00000008877)	hmgcrb (ENSBSLG00000009538)	GCNT4 (ENSBSLG00000009596)	GCNT4 (ENSBSLG00000009600)	GCNT4 (ENSBSLG00000009603)	ENSBSLG00000009637
Climbing perch	MODERN SPECIES	3	ENSATEG00000008962	ENSATEG00000008940	ENSATEG00000008934	ENSATEG00000008918	ENSATEG00000008865	ENSATEG00000008828	HOMER1 (ENSATEG00000008778)	JMY (ENSATEG00000008706) #7	bhmt (ENSATEG00000008673) #8	DMGDH (ENSATEG00000008607) #10	ARSB (ENSATEG00000008598) #11	LHFPL2 (ENSATEG00000008588) #13	SCAMP1 (ENSATEG00000008541) #14	AP3B1 (ENSATEG00000008505) #17	tbca (ENSATEG00000008490) #21	otpa (ENSATEG00000008473) #22	wdr41 (ENSATEG00000008464)	PDE8B (ENSATEG00000008314)	crhbp (ENSATEG00000008060)	s100z (ENSATEG00000008043)	ch25hl2 (ENSATEG00000008028)	f2rl1.2 (ENSATEG00000008020)	f2rl1.1 (ENSATEG00000026082)	f2r2.1 (ENSATEG00000029426)	F2RL2 (ENSATEG00000007994)	SV2C (ENSATEG00000007944)	CERT1 (ENSATEG00000007810)	ENSATEG00000007723	GCNT4 (ENSATEG00000007703)	GCNT4 (ENSATEG00000007693)	ENSATEG00000007676
Ovalentaria	ANCESTRAL SPECIES	16	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000169994	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Ovalentaria_B	ANCESTRAL SPECIES	14	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Pomacentridae	ANCESTRAL SPECIES	12	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Pomacentridae_A	ANCESTRAL SPECIES	10	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Amphiprion	ANCESTRAL SPECIES	5	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Clown anemonefish	MODERN SPECIES	1313								ENSAOCG00000022694	mta2 (ENSAOCG00000022686)	cth1 (ENSAOCG00000001644)	taf6l (ENSAOCG00000022645)	ENSAOCG00000022604	scamp1 (ENSAOCG00000022572) #14	AP3B1 (ENSAOCG00000001638) #17	tbca (ENSAOCG00000022489) #21	otpa (ENSAOCG00000001634) #22	wdr41 (ENSAOCG00000022458)	PDE8B (ENSAOCG00000022435)	crhbp (ENSAOCG00000022382)	s100z (ENSAOCG00000022366)	ch25hl2 (ENSAOCG00000022312)	f2rl1.2 (ENSAOCG00000022302)	f2rl1.1 (ENSAOCG00000022291)	f2r2.1 (ENSAOCG00000022288)	F2RL2 (ENSAOCG00000001624)
Orange clownfish	MODERN SPECIES	7	bhmt (ENSAPEG00000003429) #8	DMGDH (ENSAPEG00000003462) #10	ARSB (ENSAPEG00000003538) #11	ENSAPEG00000003544	ENSAPEG00000003561	lhfpl2a (ENSAPEG00000003590) #13	ENSAPEG00000003605	scamp1 (ENSAPEG00000003628) #14	ENSAPEG00000003682	scamp1 (ENSAPEG00000003704) #14	lhfpl2a (ENSAPEG00000003763) #13	scamp1 (ENSAPEG00000003780) #14	AP3B1 (ENSAPEG00000003852) #17	ENSAPEG00000003873	tbca (ENSAPEG00000003898) #21	otpa (ENSAPEG00000003913) #22	wdr41 (ENSAPEG00000003933)	PDE8B (ENSAPEG00000003990)	crhbp (ENSAPEG00000004114)	s100z (ENSAPEG00000004132)	ch25hl2 (ENSAPEG00000004200)	f2rl1.2 (ENSAPEG00000004215)	f2rl1.1 (ENSAPEG00000004237)	f2r2.1 (ENSAPEG00000004248)	F2RL2 (ENSAPEG00000004295)	SV2C (ENSAPEG00000004307)	ENSAPEG00000004345	ENSAPEG00000004369	ENSAPEG00000004380	ENSAPEG00000004414	ENSAPEG00000004446
Spiny chromis	MODERN SPECIES	896												lhfpl2a (ENSAPOG00000017614) #13	scamp1 (ENSAPOG00000017652) #14	AP3B1 (ENSAPOG00000017684) #17	tbca (ENSAPOG00000017698) #21	otpa (ENSAPOG00000017726) #22	wdr41 (ENSAPOG00000017816)
Bicolor damselfish	MODERN SPECIES	1423														AP3B1 (ENSSPAG00000018926) #17	tbca (ENSSPAG00000018954) #21	otpa (ENSSPAG00000018963) #22	wdr41 (ENSSPAG00000018971)	PDE8B (ENSSPAG00000018991)
Cichlidae	ANCESTRAL SPECIES	10	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f.c.b	ENSGT01050000244840.A.a.b.f.c.a.b	ENSGT01050000244840.A.a.b.f.c.a.a	ENSGT01050000244840.A.a.b.f.d	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f.c.b	ENSGT01050000244840.A.a.b.f.c.a.b	ENSGT01050000244840.A.a.b.f.c.a.a	ENSGT01050000244840.A.a.b.f.d	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b
Haplochromini	ANCESTRAL SPECIES		ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f.c.b	ENSGT01050000244840.A.a.b.f.c.a.b	ENSGT01050000244840.A.a.b.f.c.a.a	ENSGT01050000244840.A.a.b.f.d	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b
Burton s mouthbrooder	MODERN SPECIES	380	TRAF2 (ENSHBUG00000006780)	ENSHBUG00000006724	ZNF703 (ENSHBUG00000006709)	C2orf42 (ENSHBUG00000006694)	tia1 (ENSHBUG00000006676)	DTWD2 (ENSHBUG00000006635)	HOMER1 (ENSHBUG00000006589)	JMY (ENSHBUG00000006526) #7	bhmt (ENSHBUG00000006515) #8	DMGDH (ENSHBUG00000006495) #10	ARSB (ENSHBUG00000006398) #11	lhfpl2a (ENSHBUG00000006355) #13	scamp1 (ENSHBUG00000006341) #14	AP3B1 (ENSHBUG00000006320) #17	tbca (ENSHBUG00000006256) #21	otpa (ENSHBUG00000006237) #22	wdr41 (ENSHBUG00000006222)	PDE8B (ENSHBUG00000006197)	crhbp (ENSHBUG00000000153)	s100z (ENSHBUG00000006132)	ch25hl2 (ENSHBUG00000006126)	f2rl1.2 (ENSHBUG00000006100)	f2rl1.1 (ENSHBUG00000006111)	F2R (ENSHBUG00000006089)	ENSHBUG00000006042
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f.c.b	ENSGT01050000244840.A.a.b.f.c.a.b	ENSGT01050000244840.A.a.b.f.c.a.a	ENSGT01050000244840.A.a.b.f.d	ENSGT01050000244840.A.b.b.b.f	ENSGT01050000244840.A.b.b.b.e	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b
P. nyererei	MODERN SPECIES	297	TRAF2 (ENSPNYG00000006678)	ENSPNYG00000006652	ZNF703 (ENSPNYG00000006638)	C2orf42 (ENSPNYG00000006630)	tia1 (ENSPNYG00000006589)	DTWD2 (ENSPNYG00000006563)	HOMER1 (ENSPNYG00000006531)	JMY (ENSPNYG00000006512) #7	bhmt (ENSPNYG00000006436) #8	DMGDH (ENSPNYG00000006358) #10	ARSB (ENSPNYG00000006334) #11	lhfpl2a (ENSPNYG00000006322) #13	scamp1 (ENSPNYG00000006292) #14	AP3B1 (ENSPNYG00000006176) #17	tbca (ENSPNYG00000006104) #21	otpa (ENSPNYG00000006080) #22	wdr41 (ENSPNYG00000006061)	PDE8B (ENSPNYG00000005997)	crhbp (ENSPNYG00000005959)	s100z (ENSPNYG00000005915)	ch25hl2 (ENSPNYG00000005891)	f2rl1.2 (ENSPNYG00000005884)	f2rl1.1 (ENSPNYG00000005869)	F2R (ENSPNYG00000005859)	F2R (ENSPNYG00000005833)	F2R (ENSPNYG00000005812)	F2RL2 (ENSPNYG00000005804)	F2RL2 (ENSPNYG00000005774)	SV2C (ENSPNYG00000005738)	CERT1 (ENSPNYG00000005673)	hmgcrb (ENSPNYG00000005594)
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f.c.b	ENSGT01050000244840.A.a.b.f.c.a.b	ENSGT01050000244840.A.a.b.f.c.a.a	ENSGT01050000244840.A.a.b.f.d	ENSGT01050000244840.A.b.b.b.f	ENSGT01050000244840.A.b.b.b.e	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b
Eastern happy	MODERN SPECIES	19	ZNF703 (ENSACLG00000026525)	C2orf42 (ENSACLG00000026481)	tia1 (ENSACLG00000026467)	DTWD2 (ENSACLG00000026455)	HOMER1 (ENSACLG00000026430)	JMY (ENSACLG00000026423) #7	bhmt (ENSACLG00000026404) #8	DMGDH (ENSACLG00000026324) #10	ENSACLG00000026291	ENSACLG00000026286	ARSB (ENSACLG00000026268) #11	lhfpl2a (ENSACLG00000026258) #13	scamp1 (ENSACLG00000026234) #14	AP3B1 (ENSACLG00000026156) #17	tbca (ENSACLG00000026126) #21	otpa (ENSACLG00000026112) #22	wdr41 (ENSACLG00000026095)	PDE8B (ENSACLG00000026032)	crhbp (ENSACLG00000026018)	s100z (ENSACLG00000025995)	ch25hl2 (ENSACLG00000025988)	f2rl1.2 (ENSACLG00000025984)	f2rl1.1 (ENSACLG00000025981)	F2R (ENSACLG00000025972)	ENSACLG00000025957	F2R (ENSACLG00000025951)	F2R (ENSACLG00000025920)	F2R (ENSACLG00000025911)	F2RL2 (ENSACLG00000025905)	F2RL2 (ENSACLG00000025896)	SV2C (ENSACLG00000025881)
Zebra mbuna	MODERN SPECIES	1110	ENSMZEG00005005971	ZNF703 (ENSMZEG00005005987)	C2orf42 (ENSMZEG00005005998)	tia1 (ENSMZEG00005006018)	DTWD2 (ENSMZEG00005006042)	HOMER1 (ENSMZEG00005006061)	JMY (ENSMZEG00005006081) #7	bhmt (ENSMZEG00005006090) #8	DMGDH (ENSMZEG00005006121) #10	ENSMZEG00005006197	ARSB (ENSMZEG00005006208) #11	lhfpl2a (ENSMZEG00005006236) #13	scamp1 (ENSMZEG00005006251) #14	AP3B1 (ENSMZEG00005006264) #17	tbca (ENSMZEG00005006300) #21	otpa (ENSMZEG00005006314) #22	wdr41 (ENSMZEG00005006325)	PDE8B (ENSMZEG00005006348)	crhbp (ENSMZEG00005006393)	s100z (ENSMZEG00005006797)	ch25hl2 (ENSMZEG00005006834)	f2rl1.2 (ENSMZEG00005006848)	f2rl1.1 (ENSMZEG00005006863)	F2R (ENSMZEG00005006871)	F2R (ENSMZEG00005006884)	F2R (ENSMZEG00005006898)	F2R (ENSMZEG00005006911)	F2RL2 (ENSMZEG00005006917)	F2RL2 (ENSMZEG00005006925)	SV2C (ENSMZEG00005006941)	CERT1 (ENSMZEG00005007008)
Lyretail cichlid	MODERN SPECIES	419														AP3B1 (ENSNBRG00000000578) #17	tbca (ENSNBRG00000000529) #21	otpa (ENSNBRG00000000509) #22	wdr41 (ENSNBRG00000000420)	PDE8B (ENSNBRG00000020198)	crhbp (ENSNBRG00000020174)	s100z (ENSNBRG00000020136)	ch25hl2 (ENSNBRG00000020125)	f2rl1.2 (ENSNBRG00000020123)	f2rl1.1 (ENSNBRG00000020117)	F2R (ENSNBRG00000020103)	F2RL2 (ENSNBRG00000020084)	F2R (ENSNBRG00000020074)	SV2C (ENSNBRG00000020050)	CERT1 (ENSNBRG00000020026)	hmgcrb (ENSNBRG00000020016)	GCNT4 (ENSNBRG00000020005)	lhx5 (ENSNBRG00000019994)
Nile tilapia	MODERN SPECIES	19	ENSONIG00000011047	ZNF703 (ENSONIG00000011046)	C2orf42 (ENSONIG00000040415)	tia1 (ENSONIG00000007364)	DTWD2 (ENSONIG00000007368)	HOMER1 (ENSONIG00000007371)	JMY (ENSONIG00000040021) #7	bhmt (ENSONIG00000007379) #8	DMGDH (ENSONIG00000007381) #10	slc1a1 (ENSONIG00000007386)	ARSB (ENSONIG00000015486) #11	lhfpl2 (ENSONIG00000040189) #13	scamp1 (ENSONIG00000015481) #14	AP3B1 (ENSONIG00000015468) #17	tbca (ENSONIG00000038998) #21	otpa (ENSONIG00000015466) #22	wdr41 (ENSONIG00000015465)	PDE8B (ENSONIG00000015454)	crhbp (ENSONIG00000015451)	s100z (ENSONIG00000035896)	ch25hl2 (ENSONIG00000021002)	f2rl1.2 (ENSONIG00000015447)	f2rl1.1 (ENSONIG00000015446)	F2R (ENSONIG00000015441)	F2R (ENSONIG00000015444)	F2R (ENSONIG00000015442)	F2R (ENSONIG00000042992)	F2RL2 (ENSONIG00000028117)	cmklr1 (ENSONIG00000042385)	cmklr1 (ENSONIG00000035231)	SV2C (ENSONIG00000015437)
Midas cichlid	MODERN SPECIES	991	ENSACIG00000016283	ZNF703 (ENSACIG00000016321)	C2orf42 (ENSACIG00000016327)	tia1 (ENSACIG00000016352)	DTWD2 (ENSACIG00000016379)	HOMER1 (ENSACIG00000016398)	ENSACIG00000016416 #7	bhmt (ENSACIG00000016426) #8	DMGDH (ENSACIG00000016447) #10	ARSB (ENSACIG00000016480) #11	lhfpl2a (ENSACIG00000016531) #13	scamp1 (ENSACIG00000016545) #14	ENSACIG00000016574 #17	AP3B1 (ENSACIG00000016606) #17	ENSACIG00000016630	otpa (ENSACIG00000016644) #22	wdr41 (ENSACIG00000016654)	PDE8B (ENSACIG00000016694)	crhbp (ENSACIG00000016747)	s100z (ENSACIG00000016874)	ch25hl2 (ENSACIG00000016920)	f2rl1.2 (ENSACIG00000016930)	f2rl1.1 (ENSACIG00000016939)
Atherinomorphae	ANCESTRAL SPECIES	17	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000169994	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Oryzias	ANCESTRAL SPECIES	9	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Oryzias_b	ANCESTRAL SPECIES	4	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b.e	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Javanese ricefish	MODERN SPECIES	3	ZNF703 (ENSOJAG00000020091)	C2orf42 (ENSOJAG00000020094)	ENSOJAG00000020099	tia1 (ENSOJAG00000020121)	DTWD2 (ENSOJAG00000020140)	HOMER1 (ENSOJAG00000020158)	JMY (ENSOJAG00000020221) #7	bhmt (ENSOJAG00000020234) #8	DMGDH (ENSOJAG00000020352) #10	ARSB (ENSOJAG00000020969) #11	lhfpl2a (ENSOJAG00000020996) #13	ENSOJAG00000021004	scamp1 (ENSOJAG00000021017) #14	AP3B1 (ENSOJAG00000021042) #17	tbca (ENSOJAG00000021072) #21	otpa (ENSOJAG00000005941) #22	wdr41 (ENSOJAG00000005989)	PDE8B (ENSOJAG00000006231)	crhbp (ENSOJAG00000006339)	s100z (ENSOJAG00000006352)	ch25hl2 (ENSOJAG00000006368)	f2rl1.2 (ENSOJAG00000006457)	f2rl1.1 (ENSOJAG00000006526)	f2r2.1 (ENSOJAG00000006533)	F2RL2 (ENSOJAG00000006540)	SV2C (ENSOJAG00000006583)	CERT1 (ENSOJAG00000007089)	hmgcrb (ENSOJAG00000007200)	GCNT4 (ENSOJAG00000007303)	lhx5 (ENSOJAG00000007311)	mzt2b (ENSOJAG00000007325)
Indian medaka	MODERN SPECIES	30	ENSOMEG00000016346	ZNF703 (ENSOMEG00000016358)	ENSOMEG00000016365	C2orf42 (ENSOMEG00000016397)	tia1 (ENSOMEG00000016484)	DTWD2 (ENSOMEG00000016510)	HOMER1 (ENSOMEG00000016545)	JMY (ENSOMEG00000016581) #7	ENSOMEG00000016612 #10	ARSB (ENSOMEG00000016709) #11	bhmt (ENSOMEG00000016763) #8	lhfpl2a (ENSOMEG00000016802) #13	scamp1 (ENSOMEG00000016923) #14	AP3B1 (ENSOMEG00000017029) #17	ENSOMEG00000017042	otpa (ENSOMEG00000017048) #22	wdr41 (ENSOMEG00000017120)	PDE8B (ENSOMEG00000017299)	crhbp (ENSOMEG00000017356)	s100z (ENSOMEG00000017389)	ch25hl2 (ENSOMEG00000017408)	f2rl1.2 (ENSOMEG00000017412)	f2rl1.1 (ENSOMEG00000017425)	f2r2.1 (ENSOMEG00000017436)	F2RL2 (ENSOMEG00000017449)	SV2C (ENSOMEG00000000862)	CERT1 (ENSOMEG00000017675)	GCNT4 (ENSOMEG00000017718)	hmgcrb (ENSOMEG00000017841)	lhx5 (ENSOMEG00000017880)	mzt2b (ENSOMEG00000017910)
Oryzias_a	ANCESTRAL SPECIES	12	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Japanese Medaka HdrR	MODERN SPECIES	3	ZNF703 (ENSORLG00000026585)	ENSORLG00000024111	C2orf42 (ENSORLG00000002545)	ENSORLG00000002529	DTWD2 (ENSORLG00000002490)	HOMER1 (ENSORLG00000002474)	JMY (ENSORLG00000002448) #7	bhmt (ENSORLG00000002431) #8	DMGDH (ENSORLG00000002405) #10	ENSORLG00000025896	ARSB (ENSORLG00000002398) #11	lhfpl2a (ENSORLG00000002386) #13	scamp1 (ENSORLG00000002381) #14	AP3B1 (ENSORLG00000002365) #17	tbca (ENSORLG00000022186) #21	otpa (ENSORLG00000022528) #22	wdr41 (ENSORLG00000002299)	PDE8B (ENSORLG00000002273)	crhbp (ENSORLG00000002228)	s100z (ENSORLG00000030634)	ch25hl2 (ENSORLG00000002205)	f2rl1.2 (ENSORLG00000002198)	f2rl1.1 (ENSORLG00000022298)	f2r2.1 (ENSORLG00000023591)	F2RL2 (ENSORLG00000029096)	SV2C (ENSORLG00000002175)	CERT1 (ENSORLG00000002149)	hmgcrb (ENSORLG00000002060)	GCNT4 (ENSORLG00000002049)	lhx5 (ENSORLG00000002044)	mzt2b (ENSORLG00000002030)
Chinese medaka	MODERN SPECIES	753	TRAF2 (ENSOSIG00000017726)	ENSOSIG00000017734	ZNF703 (ENSOSIG00000017738)	C2orf42 (ENSOSIG00000017741)	tia1 (ENSOSIG00000017744)	DTWD2 (ENSOSIG00000017832)	HOMER1 (ENSOSIG00000017839)	JMY (ENSOSIG00000017853) #7	bhmt (ENSOSIG00000017866) #8	DMGDH (ENSOSIG00000017872) #10	ARSB (ENSOSIG00000017895) #11	lhfpl2a (ENSOSIG00000017898) #13	scamp1 (ENSOSIG00000017901) #14	AP3B1 (ENSOSIG00000017913) #17	tbca (ENSOSIG00000017957) #21	otpa (ENSOSIG00000017960) #22	crhbp (ENSOSIG00000017963)	SV2C (ENSOSIG00000017982)	F2RL2 (ENSOSIG00000018032)	f2r2.1 (ENSOSIG00000018033)	f2rl1.1 (ENSOSIG00000018034)	f2rl1.2 (ENSOSIG00000018038)	ch25hl2 (ENSOSIG00000018039)	s100z (ENSOSIG00000018041)
Cyprinodontiformes	ANCESTRAL SPECIES	16	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000169994	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Cyprinodontoidei	ANCESTRAL SPECIES	16	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000169994	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
NAME_4	ANCESTRAL SPECIES		ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Sheepshead minnow	MODERN SPECIES	557					ENSCVAG00000013609	DTWD2 (ENSCVAG00000013571)	HOMER1 (ENSCVAG00000013537)	JMY (ENSCVAG00000013485) #7	bhmt (ENSCVAG00000013479) #8	DMGDH (ENSCVAG00000013445) #10	ARSB (ENSCVAG00000013354) #11	lhfpl2a (ENSCVAG00000013322) #13	scamp1 (ENSCVAG00000013299) #14	AP3B1 (ENSCVAG00000013268) #17	tbca (ENSCVAG00000013249) #21	otpa (ENSCVAG00000013245) #22	wdr41 (ENSCVAG00000013223)	PDE8B (ENSCVAG00000013188)	crhbp (ENSCVAG00000013075)
Mummichog	MODERN SPECIES	2267															tbca (ENSFHEG00000005810) #21	otpa (ENSFHEG00000000677) #22	wdr41 (ENSFHEG00000005844)	PDE8B (ENSFHEG00000005895)	crhbp (ENSFHEG00000005908)	s100z (ENSFHEG00000005920)	ch25hl2 (ENSFHEG00000005932)	f2rl1.2 (ENSFHEG00000005941)	f2rl1.1 (ENSFHEG00000005947)	f2r2.1 (ENSFHEG00000000158)	F2RL2 (ENSFHEG00000005955)	SV2C (ENSFHEG00000005978)	CERT1 (ENSFHEG00000006058)	hmgcrb (ENSFHEG00000006120)	GCNT4 (ENSFHEG00000006132)	ENSFHEG00000006150	lhx5 (ENSFHEG00000006182)
Poeciliinae	ANCESTRAL SPECIES	12	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000169994	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Poecilia	ANCESTRAL SPECIES	12	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000169994	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
NAME_6	ANCESTRAL SPECIES	13	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000169994	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b.c	ENSGT00940000159721.h.a	ENSGT00390000015280	ENSGT00940000168653.b
Sailfin molly	MODERN SPECIES	502											ARSB (ENSPLAG00000012289) #11	lhfpl2a (ENSPLAG00000012161) #13	scamp1 (ENSPLAG00000012134) #14	AP3B1 (ENSPLAG00000012095) #17	tbca (ENSPLAG00000012073) #21	otpa (ENSPLAG00000012052) #22	wdr41 (ENSPLAG00000012032)	PDE8B (ENSPLAG00000012008)	crhbp (ENSPLAG00000011943)	s100z (ENSPLAG00000011835)	ch25hl2 (ENSPLAG00000011801)	f2rl1.2 (ENSPLAG00000011780)	f2rl1.1 (ENSPLAG00000011776)	f2r2.1 (ENSPLAG00000011774)	F2RL2 (ENSPLAG00000011769)	SV2C (ENSPLAG00000011754)
Guppy	MODERN SPECIES	442	TRAF2 (ENSPREG00000019329)	ENSPREG00000019310	ZNF703 (ENSPREG00000019285)	C2orf42 (ENSPREG00000019264)	tia1 (ENSPREG00000019232)	DTWD2 (ENSPREG00000019213)	HOMER1 (ENSPREG00000019187)	JMY (ENSPREG00000019156) #7	bhmt (ENSPREG00000019126) #8	DMGDH (ENSPREG00000019090) #10	ARSB (ENSPREG00000019046) #11	lhfpl2a (ENSPREG00000019023) #13	scamp1 (ENSPREG00000018981) #14	AP3B1 (ENSPREG00000018892) #17	ENSPREG00000018858	otpa (ENSPREG00000018848) #22	wdr41 (ENSPREG00000018815)	PDE8B (ENSPREG00000018782)	crhbp (ENSPREG00000018766)	s100z (ENSPREG00000018742)	ch25hl2 (ENSPREG00000018722)	ENSPREG00000018708	f2rl1.2 (ENSPREG00000018699)	f2rl1.1 (ENSPREG00000018692)	f2r2.1 (ENSPREG00000018683)	F2RL2 (ENSPREG00000018676)	SV2C (ENSPREG00000018654)	CERT1 (ENSPREG00000018596)	hmgcrb (ENSPREG00000018525)	GCNT4 (ENSPREG00000018502)	lhx5 (ENSPREG00000018491)
Platyfish	MODERN SPECIES	22	TRAF2 (ENSXMAG00000025264)	ENSXMAG00000029258	ZNF703 (ENSXMAG00000018678)	C2orf42 (ENSXMAG00000018679)	tia1 (ENSXMAG00000018689)	DTWD2 (ENSXMAG00000018696)	HOMER1 (ENSXMAG00000018702)	JMY (ENSXMAG00000018710) #7	bhmt (ENSXMAG00000024462) #8	DMGDH (ENSXMAG00000018724) #10	ARSB (ENSXMAG00000018745) #11	lhfpl2a (ENSXMAG00000018753) #13	scamp1 (ENSXMAG00000028164) #14	AP3B1 (ENSXMAG00000018805) #17	tbca (ENSXMAG00000024381) #21	otpa (ENSXMAG00000029861) #22	wdr41 (ENSXMAG00000018834)	PDE8B (ENSXMAG00000018842)	crhbp (ENSXMAG00000018907)	s100z (ENSXMAG00000018916)	ch25hl2 (ENSXMAG00000019422)	f2rl1.2 (ENSXMAG00000022315)	f2rl1.1 (ENSXMAG00000018920)	f2r2.1 (ENSXMAG00000018922)	F2RL2 (ENSXMAG00000018925)	SV2C (ENSXMAG00000018926)	CERT1 (ENSXMAG00000018963)	hmgcrb (ENSXMAG00000018982)	ENSXMAG00000029435	GCNT4 (ENSXMAG00000023542)	lhx5 (ENSXMAG00000025364)
Aplocheiloidei	ANCESTRAL SPECIES	5	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00940000166328	ENSGT00390000014845
Mangrove rivulus	MODERN SPECIES	424													AP3B1 (ENSKMAG00000009834) #17	ENSKMAG00000009816	tbca (ENSKMAG00000009790) #21	otpa (ENSKMAG00000009760) #22	ENSKMAG00000009744
Turquoise killifish	MODERN SPECIES	1611	ZNF703 (ENSNFUG00015005392)	ENSNFUG00015005388	ENSNFUG00015005385	C2orf42 (ENSNFUG00015005377)	TIA1 (ENSNFUG00015005301)	DTWD2 (ENSNFUG00015005273)	HOMER1 (ENSNFUG00015005124)	JMY (ENSNFUG00015005078) #7	bhmt (ENSNFUG00015005047) #8	DMGDH (ENSNFUG00015004648) #10	ARSB (ENSNFUG00015004599) #11	LHFPL2A (ENSNFUG00015004591) #13	Nfu_g_1_006313 (ENSNFUG00015004582) #14	AP3B1 (ENSNFUG00015004371) #17	tbca (ENSNFUG00015004274) #21	OTPB (ENSNFUG00015004263) #22	WDR41 (ENSNFUG00015004234)	PDE8B (ENSNFUG00015003954)	CRHBP (ENSNFUG00015003890)	S100Z (ENSNFUG00015010858)	ch25hl2 (ENSNFUG00015010842)	F2RL1.2 (ENSNFUG00015010834)	f2rl1.1 (ENSNFUG00015010828)	Nfu_g_1_006533 (ENSNFUG00015010823)	F2RL2 (ENSNFUG00015010814)	SV2C (ENSNFUG00015010761)	COL4A3BP (ENSNFUG00015009754)	HMGCRB (ENSNFUG00015009514)	GCNT4 (ENSNFUG00015009486)	lhx5 (ENSNFUG00015009471)	mzt2b (ENSNFUG00015009462)
Cod	MODERN SPECIES	17	ENSGMOG00000008430	ENSGMOG00000032551	ENSGMOG00000033908	ENSGMOG00000024352	ENSGMOG00000027352	ENSGMOG00000008423	ENSGMOG00000028315	HOMER1 (ENSGMOG00000008419)	JMY (ENSGMOG00000034971) #7	bhmt (ENSGMOG00000008411) #8	DMGDH (ENSGMOG00000008408) #10	ARSB (ENSGMOG00000008406) #11	LHFPL2 (ENSGMOG00000025040) #13	AP3B1 (ENSGMOG00000008400) #17	tbca (ENSGMOG00000008399) #21	otpa (ENSGMOG00000033256) #22	wdr41 (ENSGMOG00000008396)	PDE8B (ENSGMOG00000008392)	crhbp (ENSGMOG00000001248)	s100z (ENSGMOG00000022360)	ch25hl2 (ENSGMOG00000019768)	f2rl1.2 (ENSGMOG00000034124)	f2rl1.1 (ENSGMOG00000031845)	f2rl1.1 (ENSGMOG00000027511)	f2rl1.1 (ENSGMOG00000001234)	f2rl1.1 (ENSGMOG00000025867)	f2r2.1 (ENSGMOG00000027262)	SV2C (ENSGMOG00000023463)	ENSGMOG00000025813	ENSGMOG00000014970	ENSGMOG00000014912
Protacanthopterygii	ANCESTRAL SPECIES	26	ENSGT00940000155068.a.a	ENSGT00940000156168.B	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b.a.a	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b.j	ENSGT01050000244840.A.a.a.h.b.i	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000154399
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	47	ENSGT00940000164699.u	ENSGT00940000155068.a.a.b	ENSGT00940000156168.B.y	ENSGT00390000014618.b.c.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b.a.a	ENSGT00390000006867	ENSGT00940000156354.p.a	ENSGT00510000046704.b.a.c.h #7	ENSGT00390000003122.a.a.a.f #8	ENSGT00940000158176.a #10	ENSGT00990000203589.b.b.h #13	ENSGT00940000157310.g.a #14	ENSGT00940000157603.fb.a #17	ENSGT00390000009710.a #21	ENSGT00940000159952.a.b.a #22	ENSGT00390000017026	ENSGT00940000157817.f	ENSGT00730000111121.c	ENSGT00390000001362.b.h	ENSGT00940000161125.c	ENSGT00940000163793.A.a.g	ENSGT01050000244840.A.a.a.h.b.i	ENSGT01050000244840.A.a.a.h.a.f.b	ENSGT01050000244840.A.a.a.h.a.f.a	ENSGT01050000244840.A.a.b.f.j	ENSGT01050000244840.A.b.b.b.d	ENSGT00950000182940.b.b.f.e	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00940000155123.b.b.c	ENSGT00940000155305.b.b
Salmoninae_a	ANCESTRAL SPECIES	7	ENSGT00940000164699.u	ENSGT00940000155068.a.a.b	ENSGT00940000156168.B.y	ENSGT00390000014618.b.c.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b.a.a	ENSGT00390000006867	ENSGT00940000156354.p.a	ENSGT00510000046704.b.a.c.h #7	ENSGT00390000003122.a.a.a.f #8	ENSGT00940000158176.a #10	ENSGT00990000203589.b.b.h #13	ENSGT00940000157310.g.a #14	ENSGT00940000157603.fb.a #17	ENSGT00390000009710.b #21	ENSGT00940000159952.a.b.a #22	ENSGT00390000017026	ENSGT00940000157817.f	ENSGT00730000111121.c	ENSGT00390000001362.b.h	ENSGT00940000161125.c	ENSGT00940000163793.A.a.g	ENSGT01050000244840.A.a.a.h.b.i	ENSGT01050000244840.A.a.a.h.a.f.b	ENSGT01050000244840.A.a.a.h.a.f.a	ENSGT01050000244840.A.a.b.f.j	ENSGT01050000244840.A.b.b.b.d	ENSGT00950000182940.b.b.f.e	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00940000155123.b.b.c	ENSGT00940000155305.b.b
Salmo	ANCESTRAL SPECIES		ENSGT00940000155068.a.a.b	ENSGT00940000156168.B.y	ENSGT00390000014618.b.c.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b.a.a	ENSGT00390000006867	ENSGT00940000156354.p.a	ENSGT00510000046704.b.a.c.h #7	ENSGT00390000003122.a.a.a.f #8	ENSGT00940000158176.a #10	ENSGT01100000263538.A.a.a.b.b.m	ENSGT00990000203589.b.b.h #13	ENSGT00940000157310.g.a #14	ENSGT00940000157603.fb.a #17	ENSGT00940000170540	ENSGT00940000159952.a.b.a #22	ENSGT00390000017026	ENSGT00940000157817.f	ENSGT00730000111121.c	ENSGT00390000001362.b.h	ENSGT00940000161125.c	ENSGT00940000163793.A.a.g	ENSGT01050000244840.A.a.a.h.a.f.b	ENSGT01050000244840.A.a.a.h.a.f.a	ENSGT01050000244840.A.a.b.f.j	ENSGT01050000244840.A.b.b.b.d	ENSGT00950000182940.b.b.f.e	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00940000155123.b.b.c	ENSGT00940000155305.b.b	ENSGT00940000154399.c
Atlantic salmon	MODERN SPECIES		ENSSSAG00000099817	ENSSSAG00000075494	ENSSSAG00000042615	ENSSSAG00000042603	ENSSSAG00000035493	dtwd2 (ENSSSAG00000080299)	HOMER1 (ENSSSAG00000076069)	JMY (ENSSSAG00000080283) #7	bhmt (ENSSSAG00000080258) #8	DMGDH (ENSSSAG00000080134) #10	ENSSSAG00000108005	LHFPL2 (ENSSSAG00000115220) #13	scamp1 (ENSSSAG00000080106) #14	ap3b1 (ENSSSAG00000078995) #17	tbca (ENSSSAG00000078918)	otp (ENSSSAG00000078916) #22	wdr41 (ENSSSAG00000078906)	PDE8B (ENSSSAG00000077426)	aggf1 (ENSSSAG00000078440)	crhbp (ENSSSAG00000078436)	s100z (ENSSSAG00000120666)	ch25hl2 (ENSSSAG00000078425)	f2rl1.1 (ENSSSAG00000084722)	f2rl1.1 (ENSSSAG00000078417)	f2rl1.1 (ENSSSAG00000078421)	F2R (ENSSSAG00000077489)	F2RL2 (ENSSSAG00000098455)	ENSSSAG00000078409	ENSSSAG00000078315	ENSSSAG00000082186	hmdh (ENSSSAG00000077677)
River trout	MODERN SPECIES	356															tbca (ENSSTUG00000029187) #21	otpa (ENSSTUG00000029174) #22	wdr41 (ENSSTUG00000029118)	PDE8B (ENSSTUG00000028970)
Oncorhynchus	ANCESTRAL SPECIES	19	ENSGT00940000157038.a.b.db	ENSGT00940000164699.u	ENSGT00940000156168.B.y	ENSGT00390000014618.b.c.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b.a.a	ENSGT00390000006867	ENSGT00940000156354.p.a.a	ENSGT00510000046704.b.a.c.h #7	ENSGT00390000003122.a.a.a.f #8	ENSGT00940000158176.a #10	ENSGT00990000203589.b.b.h #13	ENSGT00940000157310.g.a #14	ENSGT00940000157603.fb.a #17	ENSGT00390000009710.a.b #21	ENSGT00940000159952.a.b.a #22	ENSGT00390000017026	ENSGT00940000157817.f	ENSGT00730000111121.c	ENSGT00390000001362.b.h	ENSGT00940000161125.c	ENSGT00940000163793.A.a.g	ENSGT01050000244840.A.a.a.h.b.i	ENSGT01050000244840.A.a.a.h.a.f.b	ENSGT01050000244840.A.a.a.h.a.f.a	ENSGT01050000244840.A.a.b.f.j	ENSGT01050000244840.A.b.b.b.d	ENSGT00950000182940.b.b.f.e	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00940000155123.b.b.c	ENSGT00940000155305.b.b
Rainbow trout	MODERN SPECIES	26	ENSOMYG00000000874	ENSOMYG00000000895	ENSOMYG00000000955	ENSOMYG00000000993	HOMER1 (ENSOMYG00000001003)	JMY (ENSOMYG00000001010) #7	bhmt (ENSOMYG00000001033) #8	DMGDH (ENSOMYG00000001494) #10	ENSOMYG00000001788	LHFPL2 (ENSOMYG00000001799) #13	ENSOMYG00000074845	SCAMP1 (ENSOMYG00000001807) #14	AP3B1 (ENSOMYG00000002708) #17	ENSOMYG00000070555	tbca (ENSOMYG00000032310) #21	otpa (ENSOMYG00000003096) #22	wdr41 (ENSOMYG00000003184)	PDE8B (ENSOMYG00000003268)	aggf1 (ENSOMYG00000003353)	crhbp (ENSOMYG00000003389)	s100z (ENSOMYG00000003438)	ch25hl2 (ENSOMYG00000003453)	f2rl1.1 (ENSOMYG00000003516)	f2rl1.1 (ENSOMYG00000076572)	F2R (ENSOMYG00000068290)	ENSOMYG00000054402	SV2C (ENSOMYG00000003632)	ENSOMYG00000049365	ENSOMYG00000067030	ENSOMYG00000003693	ENSOMYG00000004355
Oncorhynchus_a	ANCESTRAL SPECIES	12	ENSGT00940000157038.a.b.db	ENSGT00940000164699.u	ENSGT00940000156168.B.y	ENSGT00390000014618.b.c.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b.a.a	ENSGT00390000006867	ENSGT00940000156354.p.a.a	ENSGT00510000046704.b.a.c.h #7	ENSGT00390000003122.a.a.a.f #8	ENSGT00940000158176.a #10	ENSGT00990000203589.b.b.h #13	ENSGT00940000157310.g.a #14	ENSGT00940000157603.gb #17	ENSGT00390000009710.a.b #21	ENSGT00940000159952.a.b.a #22	ENSGT00390000017026	ENSGT00940000157817.f	ENSGT00730000111121.c	ENSGT00390000001362.b.h	ENSGT00940000161125.c	ENSGT00940000163793.A.a.g	ENSGT01050000244840.A.a.a.h.b.i	ENSGT01050000244840.A.a.a.h.a.f.b	ENSGT01050000244840.A.a.a.h.a.f.a	ENSGT01050000244840.A.a.b.f.j	ENSGT01050000244840.A.b.b.b.d	ENSGT00950000182940.b.b.f.e	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.a	ENSGT00940000155123.b.b.c	ENSGT00940000155305.b.b
Coho salmon	MODERN SPECIES	15	ENSOKIG00005028690	GFRA2 (ENSOKIG00005028683)	ZNF703 (ENSOKIG00005028641)	C2orf42 (ENSOKIG00005028631)	tia1 (ENSOKIG00005027835)	DTWD2 (ENSOKIG00005027772)	HOMER1 (ENSOKIG00005027685)	JMY (ENSOKIG00005027562) #7	bhmt (ENSOKIG00005027395) #8	DMGDH (ENSOKIG00005026761) #10	ENSOKIG00005026697	lhfpl2a (ENSOKIG00005026687) #13	SCAMP1 (ENSOKIG00005026634) #14	AP3B1 (ENSOKIG00005019349) #17	tbca (ENSOKIG00005018976) #21	otpa (ENSOKIG00005018943) #22	wdr41 (ENSOKIG00005018890)	PDE8B (ENSOKIG00005018615)	aggf1 (ENSOKIG00005018578)	crhbp (ENSOKIG00005018561)	s100z (ENSOKIG00005018551)	ch25hl2 (ENSOKIG00005018528)	f2rl1.2 (ENSOKIG00005018486)	f2rl1.1 (ENSOKIG00005018474)	f2rl1.1 (ENSOKIG00005018471)	F2R (ENSOKIG00005018463)	F2RL2 (ENSOKIG00005018438)	ENSOKIG00005018429	SV2C (ENSOKIG00005018365)	ENSOKIG00005018354	CERT1 (ENSOKIG00005018187)
Chinook salmon	MODERN SPECIES	12	NUP188 (ENSOTSG00005024399)	cdk5rap2 (ENSOTSG00005024766)	ZNF703 (ENSOTSG00005024776)	lhfpl2a (ENSOTSG00005024779) #13	scamp1 (ENSOTSG00005024781) #14	AP3B1 (ENSOTSG00005024796) #17	C2orf42 (ENSOTSG00005032435)	tia1 (ENSOTSG00005032437)	DTWD2 (ENSOTSG00005032660)	HOMER1 (ENSOTSG00005032662)	JMY (ENSOTSG00005032667) #7	bhmt (ENSOTSG00005032687) #8	DMGDH (ENSOTSG00005033116) #10	ENSOTSG00005035353	tbca (ENSOTSG00005035356) #21	otpa (ENSOTSG00005035378) #22	wdr41 (ENSOTSG00005035379)	PDE8B (ENSOTSG00005035380)	aggf1 (ENSOTSG00005035381)	crhbp (ENSOTSG00005035382)	s100z (ENSOTSG00005035384)	ch25hl2 (ENSOTSG00005035385)	f2rl1.2 (ENSOTSG00005035386)	f2rl1.1 (ENSOTSG00005035387)	f2rl1.1 (ENSOTSG00005035388)	F2R (ENSOTSG00005035389)	F2RL2 (ENSOTSG00005035390)	SV2C (ENSOTSG00005035394)	ENSOTSG00005035858	CERT1 (ENSOTSG00005035862)	hmgcrb (ENSOTSG00005036211)
Huchen	MODERN SPECIES	356				C2orf42 (ENSHHUG00000003486)	tia1 (ENSHHUG00000003497)	DTWD2 (ENSHHUG00000003670)	ENSHHUG00000003673	HOMER1 (ENSHHUG00000003679)	JMY (ENSHHUG00000003684) #7	DMGDH (ENSHHUG00000003757) #10	bhmt (ENSHHUG00000003824) #8	lhfpl2a (ENSHHUG00000003940) #13	scamp1 (ENSHHUG00000003948) #14	AP3B1 (ENSHHUG00000003988) #17	tbca (ENSHHUG00000004085) #21	otpa (ENSHHUG00000004114) #22	wdr41 (ENSHHUG00000004143)	PDE8B (ENSHHUG00000004183)	aggf1 (ENSHHUG00000004753)	crhbp (ENSHHUG00000004761)	s100z (ENSHHUG00000004773)	ch25hl2 (ENSHHUG00000004780)	f2rl1.2 (ENSHHUG00000004795)	f2rl1.1 (ENSHHUG00000004873)	f2rl1.1 (ENSHHUG00000004874)	F2R (ENSHHUG00000004876)	F2RL2 (ENSHHUG00000004882)	ENSHHUG00000004886
Salmoninae	ANCESTRAL SPECIES	194	ENSGT00940000164699.v	ENSGT00940000155847	ENSGT00940000155068.a.a.a	ENSGT00940000156168.B.z	ENSGT00390000014618.b.c.d	ENSGT00940000154962.A.a.b.a.b	ENSGT00940000156354.p.b	ENSGT00510000046704.b.a.c.g #7	ENSGT00390000003122.a.a.a.e #8	ENSGT00940000158176.b #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b.g #13	ENSGT00940000157310.g.b #14	ENSGT00940000157603.fb.b #17	ENSGT00390000009710.b #21	ENSGT00940000159952.a.b.b #22	ENSGT00940000157817.e	ENSGT00730000111121.d	ENSGT00390000001362.b.g
Huchen	MODERN SPECIES	169	GFRA2 (ENSHHUG00000022854)	ZNF703 (ENSHHUG00000022869)	ENSHHUG00000022873	tia1 (ENSHHUG00000022881)	HOMER1 (ENSHHUG00000023043)	JMY (ENSHHUG00000023068) #7	bhmt (ENSHHUG00000023086) #8	DMGDH (ENSHHUG00000023107) #10	ARSB (ENSHHUG00000023127) #11	lhfpl2a (ENSHHUG00000023133) #13	ENSHHUG00000023136	scamp1 (ENSHHUG00000023139) #14	ENSHHUG00000023166	AP3B1 (ENSHHUG00000023172) #17	tbca (ENSHHUG00000023555) #21	otpa (ENSHHUG00000023571) #22	PDE8B (ENSHHUG00000023579)	aggf1 (ENSHHUG00000023731)	crhbp (ENSHHUG00000023760)
Salmoninae_a	ANCESTRAL SPECIES	12	ENSGT00940000155847	ENSGT00940000155068.a.a.a	ENSGT00940000156168.B.z	ENSGT00390000014618.b.c.d	ENSGT00940000154962.A.a.b.a.b	ENSGT00940000156354.p.b	ENSGT00510000046704.b.a.c.g #7	ENSGT00390000003122.a.a.a.e #8	ENSGT00940000158176.b #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b.g #13	ENSGT00990000204064.a.a.b	ENSGT00940000157310.g.b #14	ENSGT00940000157603.fb.b #17	ENSGT00390000009710.a #21	ENSGT00940000159952.a.b.b #22	ENSGT00940000157817.e	ENSGT00730000111121.d	ENSGT00390000001362.b.g	ENSGT00940000161125.d	ENSGT00940000163793.A.a.h	ENSGT01050000244840.A.a.a.h.b.j	ENSGT01050000244840.A.a.a.h.a.e	ENSGT01050000244840.A.a.b.f.i	ENSGT01050000244840.A.b.b.b.c	ENSGT00950000182940.b.b.f.f	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000183116.a.a.b	ENSGT00940000155123.b.b.d	ENSGT00940000154399.d	ENSGT00940000155147.j
Oncorhynchus	ANCESTRAL SPECIES	18	ENSGT00940000155068.a.a.a	ENSGT00940000156168.B.z	ENSGT00390000014618.b.c.d	ENSGT00940000154962.A.a.b.a.b	ENSGT00940000156354.p.b	ENSGT00510000046704.b.a.c.g #7	ENSGT00390000003122.a.a.a.e #8	ENSGT00940000158176.b #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b.g #13	ENSGT00990000204064.a.a.b	ENSGT00940000157310.g.b #14	ENSGT00940000157603.fb.b #17	ENSGT00390000009710.b #21	ENSGT00390000009710.a.a #21	ENSGT00940000159952.a.b.b #22	ENSGT00940000157817.e	ENSGT00730000111121.d	ENSGT00390000001362.b.g	ENSGT00940000161125.d	ENSGT00940000163793.A.a.h	ENSGT01050000244840.A.a.a.h.b.j	ENSGT01050000244840.A.a.b.f.i	ENSGT01050000244840.A.b.b.b.c	ENSGT00950000182940.b.b.f.f	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000183116.a.a.b	ENSGT00940000155123.b.b.d	ENSGT00940000154399.d	ENSGT00940000155147.j	ENSGT00390000008457.d.a
Rainbow trout	MODERN SPECIES	364	ENSOMYG00000030239	ENSOMYG00000075983	ENSOMYG00000049919	HOMER1 (ENSOMYG00000030318)	JMY (ENSOMYG00000030347) #7	bhmt (ENSOMYG00000030375) #8	ENSOMYG00000069246	DMGDH (ENSOMYG00000030429) #10	ARSB (ENSOMYG00000030463) #11	LHFPL2 (ENSOMYG00000030501) #13	ENSOMYG00000030518	SCAMP1 (ENSOMYG00000023337) #14	AP3B1 (ENSOMYG00000030926) #17	ENSOMYG00000060792	tbca (ENSOMYG00000050741) #21	otpa (ENSOMYG00000032321) #22	PDE8B (ENSOMYG00000032379)	aggf1 (ENSOMYG00000032485)	crf-bp (ENSOMYG00000071371)	s100z (ENSOMYG00000032501)	ch25hl2 (ENSOMYG00000032508)	f2rl1.2 (ENSOMYG00000032514)	F2R (ENSOMYG00000003544)	ENSOMYG00000062425	F2RL2 (ENSOMYG00000032523)	SV2C (ENSOMYG00000060958)	ENSOMYG00000032540	ENSOMYG00000056356	ENSOMYG00000032608	atp6v1g1 (ENSOMYG00000032720)	slc31a1 (ENSOMYG00000032732)
Oncorhynchus_a	ANCESTRAL SPECIES	47	ENSGT00940000164699.v	ENSGT00940000155847	ENSGT00940000155068.a.a.a	ENSGT00940000156168.B.z	ENSGT00390000014618.b.c.d	ENSGT00940000154962.A.a.b.a.b	ENSGT00940000156354.p.b	ENSGT00510000046704.b.a.c.g #7	ENSGT00390000003122.a.a.a.e #8	ENSGT00940000158270 #11	ENSGT00990000203589.b.b.g #13	ENSGT00990000204064.a.a.b	ENSGT00940000157310.g.b #14	ENSGT00940000157603.fb.b #17	ENSGT00390000009710.b #21	ENSGT00940000159952.a.b.b #22	ENSGT00940000157817.e	ENSGT00730000111121.d	ENSGT00390000001362.b.g	ENSGT00940000161125.d	ENSGT00940000163793.A.a.h	ENSGT01050000244840.A.a.a.h.b.j	ENSGT01050000244840.A.a.b.f.i	ENSGT01050000244840.A.b.b.b.c	ENSGT00950000182940.b.b.f.f	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00940000155123.b.b.d	ENSGT00940000154399.d	ENSGT00940000155147.j	ENSGT00390000008457.d.a	ENSGT00940000156006.n.a
Coho salmon	MODERN SPECIES	21	ATP6V1B2 (ENSOKIG00005041039)	GFRA2 (ENSOKIG00005040990)	ZNF703 (ENSOKIG00005040977)	ENSOKIG00005040965	ENSOKIG00005039711	HOMER1 (ENSOKIG00005039439)	JMY (ENSOKIG00005039343) #7	bhmt (ENSOKIG00005039211) #8	ARSB (ENSOKIG00005038211) #11	ENSOKIG00005049671	LHFPL2 (ENSOKIG00005049668) #13	ENSOKIG00005049665	scamp1 (ENSOKIG00005049660) #14	AP3B1 (ENSOKIG00005049495) #17	tbca (ENSOKIG00005049413) #21	otpa (ENSOKIG00005049408) #22	ENSOKIG00005049404	PDE8B (ENSOKIG00005049318)	aggf1 (ENSOKIG00005049268)	crhbp (ENSOKIG00005049260)	s100z (ENSOKIG00005049257)	ch25hl2 (ENSOKIG00005049253)	f2rl1.2 (ENSOKIG00005049249)	F2R (ENSOKIG00005049246)	F2RL2 (ENSOKIG00005049244)	SV2C (ENSOKIG00005049163)	ENSOKIG00005049142	CERT1 (ENSOKIG00005048556)	atp6v1g1 (ENSOKIG00005048457)	slc31a1 (ENSOKIG00005048447)	cdc26 (ENSOKIG00005048436)
Chinook salmon	MODERN SPECIES	26	dusp11 (ENSOTSG00005013179)	ENSOTSG00005013042	GFRA2 (ENSOTSG00005013034)	ZNF703 (ENSOTSG00005013033)	ENSOTSG00005013031	ENSOTSG00005012183	HOMER1 (ENSOTSG00005012085)	JMY (ENSOTSG00005012074) #7	bhmt (ENSOTSG00005011972) #8	ARSB (ENSOTSG00005011970) #11	lhfpl2a (ENSOTSG00005011968) #13	ENSOTSG00005011967	scamp1 (ENSOTSG00005011965) #14	AP3B1 (ENSOTSG00005011705) #17	tbca (ENSOTSG00005011704) #21	otpa (ENSOTSG00005011703) #22	PDE8B (ENSOTSG00005011643)	aggf1 (ENSOTSG00005011635)	crhbp (ENSOTSG00005011633)	ch25hl2 (ENSOTSG00005011632)	f2rl1.2 (ENSOTSG00005011631)	F2R (ENSOTSG00005011630)	F2RL2 (ENSOTSG00005011629)	SV2C (ENSOTSG00005011627)	ENSOTSG00005011626	CERT1 (ENSOTSG00005011406)	atp6v1g1 (ENSOTSG00005011405)	slc31a1 (ENSOTSG00005011404)	cdc26 (ENSOTSG00005011403)	prpf4 (ENSOTSG00005011262)	rnf224 (ENSOTSG00005011260)
Salmo	ANCESTRAL SPECIES	1	ENSGT00940000155068.a.a.a	ENSGT00940000156168.B.z	ENSGT00390000014618.b.c.d	ENSGT00940000154962.A.a.b.a.b	ENSGT00940000156354.p.b	ENSGT00510000046704.b.a.c.g #7	ENSGT00390000003122.a.a.a.e #8	ENSGT00940000158176.b #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b.g #13	ENSGT00990000204064.a.a.b	ENSGT00940000157310.g.b #14	ENSGT00940000157603.fb.b #17	ENSGT00390000009710.a #21	ENSGT00390000009710.b #21	ENSGT00940000159952.a.b.b #22	ENSGT00940000157817.e	ENSGT00730000111121.d	ENSGT00390000001362.b.g	ENSGT00940000161125.d	ENSGT00940000163793.A.a.h	ENSGT01050000244840.A.a.a.h.b.j	ENSGT01050000244840.A.a.a.h.a.e	ENSGT01050000244840.A.a.b.f.i	ENSGT01050000244840.A.b.b.b.c	ENSGT00950000182940.b.b.f.f	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.a.b	ENSGT00950000183116.a.a.b	ENSGT00940000155123.b.b.d	ENSGT00940000154399.d	ENSGT00940000155147.j
River trout	MODERN SPECIES	3	ENSSTUG00000006244	dusp11 (ENSSTUG00000006269)	ENSSTUG00000006301	GFRA2 (ENSSTUG00000006440)	ZNF703 (ENSSTUG00000006469)	tia1 (ENSSTUG00000006490)	HOMER1 (ENSSTUG00000006894)	JMY (ENSSTUG00000006925) #7	bhmt (ENSSTUG00000006978) #8	ARSB (ENSSTUG00000007026) #11	lhfpl2a (ENSSTUG00000007040) #13	scamp1 (ENSSTUG00000007065) #14	ENSSTUG00000007106	AP3B1 (ENSSTUG00000007196) #17	tbca (ENSSTUG00000010231) #21	otpa (ENSSTUG00000010242) #22	ENSSTUG00000010259	PDE8B (ENSSTUG00000010269)	aggf1 (ENSSTUG00000010412)	crhbp (ENSSTUG00000010464)	s100z (ENSSTUG00000010478)	ch25hl2 (ENSSTUG00000010489)	f2rl1.2 (ENSSTUG00000010495)	f2rl1.1 (ENSSTUG00000010502)	F2R (ENSSTUG00000010507)	F2RL2 (ENSSTUG00000010510)	SV2C (ENSSTUG00000010522)	ENSSTUG00000010636	ENSSTUG00000010643	CERT1 (ENSSTUG00000010713)	atp6v1g1 (ENSSTUG00000012790)
Atlantic salmon	MODERN SPECIES	2	ENSSSAG00000112628	ENSSSAG00000075527	HOMER1 (ENSSSAG00000087394)	ENSSSAG00000089866	JMY (ENSSSAG00000076160) #7	ENSSSAG00000106565	bhmt (ENSSSAG00000076167) #8	DMGDH (ENSSSAG00000076180) #10	arsb (ENSSSAG00000076193) #11	LHFPL2 (ENSSSAG00000076195) #13	SCAMP1 (ENSSSAG00000076200) #14	ENSSSAG00000099787	AP3B1 (ENSSSAG00000076252) #17	ENSSSAG00000091845	tbca (ENSSSAG00000077412) #21	otpa (ENSSSAG00000100514) #22	ENSSSAG00000089049	PDE8B (ENSSSAG00000078477)	aggf1 (ENSSSAG00000077434)	crhbp (ENSSSAG00000077468)	s100z (ENSSSAG00000112998)	ch25hl2 (ENSSSAG00000113693)	par2 (ENSSSAG00000077482)	F2R (ENSSSAG00000089851)	F2RL2 (ENSSSAG00000077494)	SV2C (ENSSSAG00000077524)	ENSSSAG00000078276	ENSSSAG00000101380	ENSSSAG00000078152	VATG1 (ENSSSAG00000078764)	slc31a1 (ENSSSAG00000097858)
Northern pike	MODERN SPECIES	13	ATP6V1B2 (ENSELUG00000006287)	GFRA2 (ENSELUG00000006312)	ZNF703 (ENSELUG00000006331)	C2orf42 (ENSELUG00000006346)	tia1 (ENSELUG00000006377)	DTWD2 (ENSELUG00000006394)	HOMER1 (ENSELUG00000006436)	JMY (ENSELUG00000006465) #7	DMGDH (ENSELUG00000006530) #10	bhmt (ENSELUG00000006487) #8	ARSB (ENSELUG00000006567) #11	lhfpl2a (ENSELUG00000006588) #13	scamp1 (ENSELUG00000006644) #14	AP3B1 (ENSELUG00000006692) #17	tbca (ENSELUG00000006728) #21	otpa (ENSELUG00000006749) #22	wdr41 (ENSELUG00000006803)	PDE8B (ENSELUG00000006875)	aggf1 (ENSELUG00000000226)	crhbp (ENSELUG00000006962)	s100z (ENSELUG00000006972)	ch25hl2 (ENSELUG00000006977)	f2rl1.2 (ENSELUG00000006989)	f2rl1.1 (ENSELUG00000006993)	f2r2.1 (ENSELUG00000007082)	f2rl1.1 (ENSELUG00000007001)	F2RL2 (ENSELUG00000007103)	SV2C (ENSELUG00000007129)	CERT1 (ENSELUG00000007230)	hmgcrb (ENSELUG00000007320)	atp6v1g1 (ENSELUG00000034652)
Otomorpha	ANCESTRAL SPECIES	17	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000154396.a	ENSGT00940000155640.b	ENSGT00940000159243	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310 #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00510000048902.a.f
Clupeiformes	ANCESTRAL SPECIES	129																ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h	ENSGT00510000048902.a.f	ENSGT00940000166328
Denticle herring	MODERN SPECIES	13	ENSDCDG00000017819	plgrkt (ENSDCDG00000017824)	rln1 (ENSDCDG00000017828)	jak2a (ENSDCDG00000017853)	stard4 (ENSDCDG00000018062)	DTWD2 (ENSDCDG00000018065)	HOMER1 (ENSDCDG00000018077)	JMY (ENSDCDG00000018277) #7	bhmt (ENSDCDG00000018312) #8	DMGDH (ENSDCDG00000018398) #10	ARSB (ENSDCDG00000020316) #11	lhfpl2a (ENSDCDG00000020317) #13	scamp1 (ENSDCDG00000020319) #14	AP3B1 (ENSDCDG00000020440) #17	tbca (ENSDCDG00000027202) #21	otpa (ENSDCDG00000027203) #22	wdr41 (ENSDCDG00000027205)	PDE8B (ENSDCDG00000027214)	ENSDCDG00000027275	aggf1 (ENSDCDG00000027278)	crhbp (ENSDCDG00000027281)	s100z (ENSDCDG00000027282)	ch25hl2 (ENSDCDG00000027283)	f2rl1.2 (ENSDCDG00000027284)	f2rl1.2 (ENSDCDG00000027286)	f2rl1.1 (ENSDCDG00000027287)	F2RL2 (ENSDCDG00000027288)	SV2C (ENSDCDG00000027291)	CERT1 (ENSDCDG00000027303)	hmgcrb (ENSDCDG00000027394)	GCNT4 (ENSDCDG00000028927)
Otophysi	ANCESTRAL SPECIES	248						ENSGT00950000183047.d.e	ENSGT00940000159211.C.jb.b	ENSGT00940000156959.A.c.a	ENSGT00390000014118	ENSGT00390000017382	ENSGT00390000006452.b.a	ENSGT00390000008726.h.a	ENSGT00940000160015	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00950000183101.a.b.b.a.b
Cyprinoidei	ANCESTRAL SPECIES	36	ENSGT00940000159607	ENSGT00390000000529	ENSGT01050000244898.b.b.e.b	ENSGT00940000157321	ENSGT00940000156290.b	ENSGT00390000016526	ENSGT00940000155373	ENSGT00940000156959.A.c.a	ENSGT00390000014118	ENSGT00390000017382	ENSGT00390000006452.b.a	ENSGT00390000008726.h.a	ENSGT00940000160015	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817.c	ENSGT00730000111121	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT00940000157194.d	ENSGT00940000157936	ENSGT00940000153391.c.b.a.j.a	ENSGT01060000248575.C	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	447															ENSGT00940000170540	ENSGT00940000159952.a.b.c #22	ENSGT00390000017026.h	ENSGT00940000157817.c.a.b	ENSGT00390000001362.b.a	ENSGT00940000161125	ENSGT00940000163793.A.a.d	ENSGT01050000244840.A.a.a.h.b.c	ENSGT01050000244840.A.a.a.h.a.r	ENSGT01050000244840.A.a.b.f.m.b.a.a.b	ENSGT01050000244840.A.a.b.f.m.b.a.a.a	ENSGT01050000244840.A.a.b.f.n.b	ENSGT00940000157194.d.a	ENSGT00940000157936.o.b	ENSGT00940000153391.c.b.a.j.b.b	ENSGT00940000157419.v	ENSGT00940000159990.e
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	608								ppp1r26 (ENSCARG00000025030)	mrps2 (ENSCARG00000025033)	dipk1b (ENSCARG00000025046)	agpat2 (ENSCARG00000025063)	egfl7 (ENSCARG00000025111)	AP3B1 (ENSCARG00000025301) #17	ENSCARG00000026285	tbca (ENSCARG00000026292) #21	otpa (ENSCARG00000026300) #22	wdr41 (ENSCARG00000026315)	PDE8B (ENSCARG00000026408)
Goldfish	MODERN SPECIES	995																otpa (ENSCARG00000024676) #22	wdr41 (ENSCARG00000024632)
Cyprininae_a	ANCESTRAL SPECIES	81	ENSGT01050000244898.b.b.e.b.a	ENSGT00940000157321.a.b	ENSGT00940000156290.b.e	ENSGT00390000016526.j	ENSGT00940000155373.p	ENSGT00950000183047.d.e.c	ENSGT00940000159211.C.jb.b.f	ENSGT00940000156959.A.c.a.a	ENSGT00390000014118.j	ENSGT00390000017382.l	ENSGT00390000006452.b.a.h	ENSGT00390000008726.h.a.a	ENSGT00940000160015.g	ENSGT00940000157603.mb #17	ENSGT00940000170540	ENSGT00940000159952.a.b.c #22	ENSGT00390000017026.h	ENSGT00940000157817.c.a.b	ENSGT00940000157817.c.b	ENSGT00730000111121	ENSGT00390000001362.b.a	ENSGT00940000161125	ENSGT01050000244840.A.a.b.f.m.a.b.b	ENSGT00940000163793.A.a.d	ENSGT01050000244840.A.a.a.h.b.c	ENSGT01050000244840.A.a.a.h.a.r	ENSGT01050000244840.A.a.b.f.m.a.b.a	ENSGT01050000244840.A.a.b.f.m.b.a.a.b	ENSGT01050000244840.A.a.b.f.m.b.a.a.a	ENSGT01050000244840.A.a.b.f.n.b	ENSGT00940000157194.d.a
Common carp reference	MODERN SPECIES	38	mob1bb (ENSCCRG00000070102)	dck (ENSCCRG00000010449)	ENSCCRG00000074815	fpgs (ENSCCRG00000039826)	cdk9 (ENSCCRG00000076439)	ENSCCRG00000045641	ENSCCRG00000008076	ENSCCRG00000080133	olfm1b (ENSCCRG00000027210)	ppp1r26 (ENSCCRG00000077967)	dipk1b (ENSCCRG00000061312)	agpat2 (ENSCCRG00000065975)	egfl7 (ENSCCRG00000007399)	AP3B1 (ENSCCRG00000072213) #17	tbca (ENSCCRG00000071108) #21	otpa (ENSCCRG00000031449) #22	wdr41 (ENSCCRG00000080357)	PDE8B (ENSCCRG00000052016)	crhbp (ENSCCRG00000029542)	aggf1 (ENSCCRG00000036413)	ch25hl2 (ENSCCRG00000059117)	S100Z (ENSCCRG00000058180)	f2rl1.1 (ENSCCRG00000081208)	ENSCCRG00000055039	F2R (ENSCCRG00000037167)	F2R (ENSCCRG00000077171)	F2R (ENSCCRG00000059546)	ENSCCRG00000074926	nr6a1b (ENSCCRG00000041881)	nr5a1b (ENSCCRG00000016558)	NEK6 (ENSCCRG00000046205)
Golden-line barbel	MODERN SPECIES	60	mob1bb (ENSSGRG00000008026)	dck (ENSSGRG00000008025)	SLC4A4 (ENSSGRG00000008024)	fpgs (ENSSGRG00000007569)	ENSSGRG00000007545	FNBP1 (ENSSGRG00000001756)	ENSSGRG00000001643	olfm1b (ENSSGRG00000001512)	ppp1r26 (ENSSGRG00000001508)	mrps2 (ENSSGRG00000001507)	dipk1b (ENSSGRG00000001503)	agpat2 (ENSSGRG00000001488)	egfl7 (ENSSGRG00000001475)	AP3B1 (ENSSGRG00000000515) #17	ENSSGRG00000000466	otpa (ENSSGRG00000000460) #22	wdr41 (ENSSGRG00000000371)	PDE8B (ENSSGRG00000000287)	aggf1 (ENSSGRG00000000196)	crhbp (ENSSGRG00000000115)	s100z (ENSSGRG00000051775)	ch25hl2 (ENSSGRG00000051774)	f2rl1.2 (ENSSGRG00000051773)	f2rl1.1 (ENSSGRG00000051772)	F2R (ENSSGRG00000051770)	F2R (ENSSGRG00000051769)	F2R (ENSSGRG00000051768)	OLFML2A (ENSSGRG00000051767)	nr6a1b (ENSSGRG00000051757)	nr5a1b (ENSSGRG00000051754)	psmb7 (ENSSGRG00000051638)
Cyprininae	ANCESTRAL SPECIES	344	ENSGT00940000156290.b.f	ENSGT00390000016526.i	ENSGT00940000155373.o	ENSGT00940000163304.j.a.a.g.a.b.a.b.b.b.a.a	ENSGT00950000183047.d.e.d	ENSGT00390000003044	ENSGT00940000159211.C.jb.b.e	ENSGT00940000156959.A.c.a.b	ENSGT00390000014118.i	ENSGT00390000017382.k	ENSGT00390000006452.b.a.g	ENSGT00390000008726.h.a.b	ENSGT00940000160015.h	ENSGT00940000157603.lb #17	ENSGT00390000009710.d #21	ENSGT00940000159952.a.b.d #22	ENSGT00390000017026.g	ENSGT00940000157817.c.a.a	ENSGT00730000111121	ENSGT00940000157817.c.b	ENSGT00390000001362.b.b
Goldfish	MODERN SPECIES	13	SV2C (ENSCARG00000034442)	SEMA4D (ENSCARG00000033779)	zgc:86839 (ENSCARG00000033698)	SHC3 (ENSCARG00000033256)	S1PR3 (ENSCARG00000033245)	ENSCARG00000033235	hnrnpabb (ENSCARG00000033221)	ZBTB7C (ENSCARG00000033216)	ppp1r26 (ENSCARG00000033208)	mrps2 (ENSCARG00000033188)	dipk1b (ENSCARG00000033171)	agpat2 (ENSCARG00000033142)	egfl7 (ENSCARG00000033120)	AP3B1 (ENSCARG00000026044) #17	tbca (ENSCARG00000025781) #21	otpa (ENSCARG00000025755) #22	wdr41 (ENSCARG00000025745)	PDE8B (ENSCARG00000021983)	aggf1 (ENSCARG00000021820)	crhbp (ENSCARG00000021809)	s100z (ENSCARG00000021799)	ch25hl2 (ENSCARG00000021788)	rpl28 (ENSCARG00000021683)	ENSCARG00000021674	ENSCARG00000021530	pdcl (ENSCARG00000021486)	ENSCARG00000021475	ENSCARG00000021470	ENSCARG00000021464	ENSCARG00000021458	ENSCARG00000021454
Cyprininae_a	ANCESTRAL SPECIES	201	ENSGT00940000156290.b.f	ENSGT00390000016526.i	ENSGT00940000155373.o	ENSGT00940000163304.j.a.a.g.a.b.a.b.b.b.a.a	ENSGT00950000183047.d.e.d	ENSGT00390000003044	ENSGT00940000159211.C.jb.b.e	ENSGT00940000156959.A.c.a.b	ENSGT00390000014118.i	ENSGT00390000017382.k	ENSGT00390000006452.b.a.g	ENSGT00390000008726.h.a.b	ENSGT00940000160015.h	ENSGT00940000157603.lb #17	ENSGT00390000009710.d #21	ENSGT00940000159952.a.b.d #22	ENSGT00390000017026.g	ENSGT00940000157817.c.a.a	ENSGT00390000001362.b.b	ENSGT00940000163793.A.a.c	ENSGT01050000244840.A.a.a.h.b.d	ENSGT01050000244840.A.a.a.h.a.q	ENSGT01050000244840.A.a.b.f.m.b.b	ENSGT01050000244840.A.a.b.f.m.a.a.b	ENSGT01050000244840.A.a.b.f.n.a.a	ENSGT00940000157194.d.b	ENSGT00940000157936.o.a	ENSGT00940000153391.c.b.a.j.b.a	ENSGT00940000157419.u	ENSGT00940000159990.e	ENSGT00940000158821.r.a
Golden-line barbel	MODERN SPECIES	69	REXO4 (ENSSGRG00000033608)	CACFD1 (ENSSGRG00000033606)	mob1bb (ENSSGRG00000033582)	SLC4A4 (ENSSGRG00000033085)	fpgs (ENSSGRG00000033055)	cdk9 (ENSSGRG00000033028)	FNBP1 (ENSSGRG00000033022)	ENSSGRG00000033019	olfm1b (ENSSGRG00000033010)	mrps2 (ENSSGRG00000033007)	dipk1b (ENSSGRG00000033004)	agpat2 (ENSSGRG00000033002)	egfl7 (ENSSGRG00000032997)	AP3B1 (ENSSGRG00000031667) #17	tbca (ENSSGRG00000031651) #21	otpa (ENSSGRG00000031650) #22	wdr41 (ENSSGRG00000031551)	PDE8B (ENSSGRG00000031487)	ENSSGRG00000031486	crhbp (ENSSGRG00000031485)	ENSSGRG00000031484	ch25hl2 (ENSSGRG00000031483)	f2rl1.2 (ENSSGRG00000031482)	f2rl1.1 (ENSSGRG00000031481)	ENSSGRG00000031480	F2R (ENSSGRG00000031479)	F2R (ENSSGRG00000031478)	F2R (ENSSGRG00000031477)	F2R (ENSSGRG00000031476)	ENSSGRG00000031475	OLFML2A (ENSSGRG00000031473)
Common carp reference	MODERN SPECIES	45	dck (ENSCCRG00000079507)	ENSCCRG00000048099	fpgs (ENSCCRG00000047897)	cdk9 (ENSCCRG00000068084)	ENSCCRG00000022824	ENSCCRG00000076877	ENSCCRG00000073805	ENSCCRG00000046852	olfm1b (ENSCCRG00000060118)	ppp1r26 (ENSCCRG00000014473)	dipk1b (ENSCCRG00000056748)	agpat2 (ENSCCRG00000014492)	egfl7 (ENSCCRG00000014498)	AP3B1 (ENSCCRG00000023767) #17	tbca (ENSCCRG00000031464) #21	otpa (ENSCCRG00000031496) #22	wdr41 (ENSCCRG00000031425)	PDE8B (ENSCCRG00000031050)	crhbp (ENSCCRG00000029549)	f2rl1.2 (ENSCCRG00000046917)	ch25hl2 (ENSCCRG00000046882)	ch25hl2 (ENSCCRG00000057335)	f2rl1.1 (ENSCCRG00000046913)	ENSCCRG00000066924	ENSCCRG00000046911	ENSCCRG00000043469	ENSCCRG00000016518	ENSCCRG00000050743	nr6a1b (ENSCCRG00000051533)	nr5a1b (ENSCCRG00000025089)	psmb7 (ENSCCRG00000046505)
Zebrafish	MODERN SPECIES	13	FNBP1 (ENSDARG00000101028)	ENSDARG00000091271	COL5A1 (ENSDARG00000012593)	olfm1b (ENSDARG00000014053)	ENSDARG00000092842	ENSDARG00000093602	ppp1r26 (ENSDARG00000102891)	mrps2 (ENSDARG00000103198)	zgc:113019 (ENSDARG00000099743)	dipk1b (ENSDARG00000117093)	agpat2 (ENSDARG00000101139)	egfl7 (ENSDARG00000100657)	ENSDARG00000110056 #17	AP3B1 (ENSDARG00000100082) #17	tbca (ENSDARG00000016754) #21	otpa (ENSDARG00000014201) #22	wdr41 (ENSDARG00000009851)	PDE8B (ENSDARG00000063706)	aggf1 (ENSDARG00000060109)	crhbp (ENSDARG00000024831)	s100z (ENSDARG00000038729)	ch25hl2 (ENSDARG00000038728)	ENSDARG00000114567	f2rl1.2 (ENSDARG00000077540)	f2rl1.1 (ENSDARG00000068856)	F2R (ENSDARG00000086262)	f2r2.1 (ENSDARG00000077638)	F2R (ENSDARG00000086236)	F2R (ENSDARG00000090041)	F2R (ENSDARG00000087469)	F2R (ENSDARG00000059507)
Characiphysae	ANCESTRAL SPECIES	68	ENSGT01050000244898.b.b.e.b	ENSGT00940000157321	ENSGT00940000156290.b	ENSGT00390000016526	ENSGT00940000155373	ENSGT00950000183047.d.e	ENSGT00940000159211.C.jb.b	ENSGT00940000156959.A.c.a	ENSGT00390000014118	ENSGT00390000017382	ENSGT00390000006452.b.a	ENSGT00390000008726.h.a	ENSGT00940000160015	ENSGT00940000157603.hb #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00940000155152.e
Channel catfish	MODERN SPECIES	9	ENSIPUG00000021116	FPGS (ENSIPUG00000021134)	ENSIPUG00000021157	ENSIPUG00000021195	ENSIPUG00000021199	FNBP1 (ENSIPUG00000021216)	CDK9 (ENSIPUG00000021301)	cdk9 (ENSIPUG00000021318)	olfm1b (ENSIPUG00000021337)	ppp1r26 (ENSIPUG00000021349)	fam69b (ENSIPUG00000021354)	agpat2 (ENSIPUG00000021366)	EGFL7 (ENSIPUG00000021382)	ap3b1 (ENSIPUG00000021394) #17	tbca (ENSIPUG00000021474) #21	otpa (ENSIPUG00000021492) #22	s100z (ENSIPUG00000021500)	ch25hl2 (ENSIPUG00000021505)	ENSIPUG00000021507	f2rl1 (ENSIPUG00000021530)	psmb7 (ENSIPUG00000021532)	aggf1 (ENSIPUG00000021569)	wdr41 (ENSIPUG00000021613)	nr5a1b (ENSIPUG00000021672)	uqcr10 (ENSIPUG00000022177)	rpl35 (ENSIPUG00000022186)	wdr38 (ENSIPUG00000022200)	F2RL2 (ENSIPUG00000022237)	ENSIPUG00000022239	CCNG2 (ENSIPUG00000022244)	ccni (ENSIPUG00000022251)
Characiphysae_b	ANCESTRAL SPECIES	73	ENSGT01050000244898.b.b.e.b	ENSGT00940000157321	ENSGT00940000156290.b	ENSGT00390000016526	ENSGT00940000155373	ENSGT00950000183047.d.e	ENSGT00940000159211.C.jb.b	ENSGT00940000156959.A.c.a	ENSGT00390000014118	ENSGT00390000017382	ENSGT00390000006452.b.a	ENSGT00390000008726.h.a	ENSGT00940000160015	ENSGT00940000157603.hb #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00940000155152.e
Electric eel	MODERN SPECIES	330												zeb2b (ENSEEEG00000024618)	AP3B1 (ENSEEEG00000024617) #17	ENSEEEG00000024616	tbca (ENSEEEG00000024615) #21	otpa (ENSEEEG00000024614) #22	wdr41 (ENSEEEG00000024613)	PDE8B (ENSEEEG00000024611)	aggf1 (ENSEEEG00000024610)	crhbp (ENSEEEG00000024609)	s100z (ENSEEEG00000024607)	ch25hl2 (ENSEEEG00000024606)
Characoidei	ANCESTRAL SPECIES	67	ENSGT00940000157321	ENSGT00940000156290.b	ENSGT00390000016526	ENSGT00940000155373	ENSGT00950000183047.d.e	ENSGT00940000159211.C.jb.b	ENSGT00940000156959.A.c.a	ENSGT00950000183007.b.e.b.a.d	ENSGT00390000014118	ENSGT00390000017382	ENSGT00390000006452.b.a	ENSGT00390000008726.h.a	ENSGT00940000160015	ENSGT00940000157603.hb #17	ENSGT00390000009710 #21	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00730000111121	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00940000155152.e
Mexicana tetra	MODERN SPECIES	5	banf1 (ENSAMXG00000042870)	slc3a2b (ENSAMXG00000007338)	calm3b (ENSAMXG00000033287)	ENSAMXG00000031416	ENSAMXG00000030315	ENSAMXG00000034188	ENSAMXG00000037986	ENSAMXG00000029280	dipk1b (ENSAMXG00000030250)	agpat2 (ENSAMXG00000030286)	egfl7 (ENSAMXG00000037257)	ENSAMXG00000033430	ENSAMXG00000039059 #17	AP3B1 (ENSAMXG00000041586) #17	tbca (ENSAMXG00000038893) #21	otpa (ENSAMXG00000005573) #22	wdr41 (ENSAMXG00000019497)	PDE8B (ENSAMXG00000019516)	aggf1 (ENSAMXG00000042451)	crhbp (ENSAMXG00000019578)	s100z (ENSAMXG00000036740)	ch25hl2 (ENSAMXG00000024958)	f2rl1.2 (ENSAMXG00000041505)	f2rl1.1 (ENSAMXG00000041729)	f2rl1.1 (ENSAMXG00000035707)	f2rl1.1 (ENSAMXG00000019610)	f2rl1.1 (ENSAMXG00000029935)	f2rl1.1 (ENSAMXG00000029451)	f2rl1.1 (ENSAMXG00000032386)	f2rl1.1 (ENSAMXG00000033732)	f2rl1.1 (ENSAMXG00000038686)
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000159952.b #22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000159952.b #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000159952.b #22
Acanthomorphata	ANCESTRAL SPECIES	15	ENSGT00940000156621.e.b	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000006867	ENSGT00940000156354.p	ENSGT00510000046704.b.a.c #7	ENSGT00390000003122.a.a.a #8	ENSGT00940000158176 #10	ENSGT00940000158270 #11	ENSGT00990000203589.b.b #13	ENSGT00940000157310.g #14	ENSGT00940000157603 #17	ENSGT00390000009710 #21	ENSGT00940000159952.b #22	ENSGT00940000170540	ENSGT00940000159952.a.b #22	ENSGT00390000017026	ENSGT00940000157817	ENSGT00390000001362.b	ENSGT00940000161125	ENSGT00940000163793.A.a	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT01050000244840.A.b.b.b	ENSGT00950000182940.b.b.f	ENSGT00940000155123.b.b	ENSGT00940000155305.b.b	ENSGT00940000159721.h
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000159952.b #22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000159952.b #22
Tiger tail seahorse	MODERN SPECIES	485	pitpnb (ENSHCOG00000004846)	pitpnb (ENSHCOG00000004815)	ENSHCOG00000004806	ENSHCOG00000004799	ENSHCOG00000004786	ENSHCOG00000004776	ptpn11a (ENSHCOG00000004751)	tmed2 (ENSHCOG00000004728)	ENSHCOG00000004716	ddx55 (ENSHCOG00000004710)	eif2b1 (ENSHCOG00000004679)	ENSHCOG00000004660 #17	uqcr10 (ENSHCOG00000004645)	AP3B1 (ENSHCOG00000004632) #17	tbca (ENSHCOG00000004612) #21	OTP (ENSHCOG00000004603) #22	wdr41 (ENSHCOG00000004591)
Elephant shark	MODERN SPECIES	1625															tbca (ENSCMIG00000001877) #21	otpa (ENSCMIG00000001871) #22	wdr41 (ENSCMIG00000001693)	ENSCMIG00000001540	ENSCMIG00000001456	aggf1 (ENSCMIG00000001406)	crhbp (ENSCMIG00000001390)	s100z (ENSCMIG00000001333)	ch25hl2 (ENSCMIG00000001313)	ENSCMIG00000001311	f2rl1.1 (ENSCMIG00000001302)	ENSCMIG00000001298	F2R (ENSCMIG00000001296)	F2RL2 (ENSCMIG00000001290)	ENSCMIG00000000914	sv2ca (ENSCMIG00000000779)	ENSCMIG00000000756
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000159952 #22
Hagfish	DUPLICATION
Hagfish	MODERN SPECIES	198													GNA11 (ENSEBUG00000010345)	ENSEBUG00000012777	ENSEBUG00000001274	otpa (ENSEBUG00000011126) #22	ENSEBUG00000006477 #22	ENSEBUG00000006955	SMG5 (ENSEBUG00000003739)	ENSEBUG00000005214	ENSEBUG00000009406	ENSEBUG00000007055	psmb1 (ENSEBUG00000003225)	ENSEBUG00000007016	ENSEBUG00000005313	ENSEBUG00000014212	ETF1 (ENSEBUG00000012821)	ENSEBUG00000001368	ENSEBUG00000010949
Hagfish	MODERN SPECIES	198												GNA11 (ENSEBUG00000010345)	ENSEBUG00000012777	ENSEBUG00000001274	otpa (ENSEBUG00000011126) #22	ENSEBUG00000006477 #22	ENSEBUG00000006955	SMG5 (ENSEBUG00000003739)	ENSEBUG00000005214	ENSEBUG00000009406	ENSEBUG00000007055	psmb1 (ENSEBUG00000003225)	ENSEBUG00000007016	ENSEBUG00000005313	ENSEBUG00000014212	ETF1 (ENSEBUG00000012821)	ENSEBUG00000001368	ENSEBUG00000010949
Ciona	ANCESTRAL SPECIES																	ENSGT00940000159952 #22
Ciona intestinalis	MODERN SPECIES	5	ENSCING00000004092	ap4 (ENSCING00000014406)	ENSCING00000004088	ENSCING00000004086	ENSCING00000004081	ENSCING00000004080	ENSCING00000014407	hmg1/2 (ENSCING00000004075)	ENSCING00000020105	ENSCING00000004069	ENSCING00000004059	ENSCING00000004111	ci-arm37 (ENSCING00000004109)	ENSCING00000010237	ENSCING00000023758	ENSCING00000004120 #22	ENSCING00000004154	ENSCING00000021489	ENSCING00000020295	ENSCING00000014397	ENSCING00000014398	ENSCING00000014399	ENSCING00000018572	ENSCING00000023483	ENSCING00000024736	ENSCING00000022616	ENSCING00000021123	ENSCING00000004168	ENSCING00000020094	ENSCING00000004162	ENSCING00000004159