Euteleostomi ANCESTRAL SPECIES 56 ENSGT00390000014907.B ENSGT00940000159146 ENSGT00950000182938.b.b.b.b.b.b ENSGT00940000154470.a ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 Sarcopterygii ANCESTRAL SPECIES 68 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 Tetrapoda ANCESTRAL SPECIES 2 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 Amniota ANCESTRAL SPECIES 4 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 Mammalia ANCESTRAL SPECIES 10 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00940000166139 Theria ANCESTRAL SPECIES 11 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT01030000234969 Eutheria ANCESTRAL SPECIES 20 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Boreoeutheria ANCESTRAL SPECIES 22 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Euarchontoglires ANCESTRAL SPECIES 22 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Euarchontoglires_A ANCESTRAL SPECIES 22 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Glires ANCESTRAL SPECIES 23 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Rodentia ANCESTRAL SPECIES 23 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Rodentia_B ANCESTRAL SPECIES 27 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Myomorpha ANCESTRAL SPECIES 35 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Muroidea ANCESTRAL SPECIES 13 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Upper Galilee mountains blind mole rat MODERN SPECIES 929 Tcf4 (ENSNGAG00000021553) #22 Ccdc68 (ENSNGAG00000021312) #23 Rab27b (ENSNGAG00000022159) #24 Dynap (ENSNGAG00000021909) #25 4930503L19Rik (ENSNGAG00000013773) #26 ENSNGAG00000019271 #27 Poli (ENSNGAG00000023223) #28 Mbd2 (ENSNGAG00000018354) #29 Muroidea_A ANCESTRAL SPECIES 18 ENSGT00390000018596.A.b ENSGT00940000159977 ENSGT00940000159566 ENSGT00950000182810.A.a.b ENSGT00390000003058.a ENSGT00390000000781 ENSGT00390000018415 ENSGT00940000154686 ENSGT00940000153393.A ENSGT00510000048187 ENSGT00390000000724.c.b ENSGT00940000156554 ENSGT00390000002368 ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Murinae ANCESTRAL SPECIES 17 ENSGT00390000018596.A.b ENSGT00940000159977 ENSGT00940000159566 ENSGT00950000182810.A.a.b ENSGT00390000003058.a ENSGT00390000000781 ENSGT00390000018415 ENSGT00940000154686 ENSGT00940000153393.A ENSGT00510000048187 ENSGT00390000000724.c.b ENSGT00940000156554 ENSGT00390000002368 ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Mus ANCESTRAL SPECIES 19 ENSGT00390000018596.A.b ENSGT00940000159977 ENSGT00940000159566 ENSGT00950000182810.A.a.b ENSGT00390000003058.a ENSGT00390000000781 ENSGT00390000018415 ENSGT00940000154686 ENSGT00940000153393.A ENSGT00510000048187 ENSGT00390000000724.c.b ENSGT00940000156554 ENSGT00390000002368 ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00860000135602 Mus_A ANCESTRAL SPECIES 19 ENSGT00390000018596.A.b ENSGT00940000159977 ENSGT00940000159566 ENSGT00950000182810.A.a.b ENSGT00390000003058.a ENSGT00390000000781 ENSGT00390000018415 ENSGT00940000154686 ENSGT00940000153393.A ENSGT00510000048187 ENSGT00390000000724.c.b ENSGT00940000156554 ENSGT00390000002368 ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00860000135602 Mus_B ANCESTRAL SPECIES 19 ENSGT00390000018596.A.b ENSGT00940000159977 ENSGT00940000159566 ENSGT00950000182810.A.a.b ENSGT00390000003058.a ENSGT00390000000781 ENSGT00390000018415 ENSGT00940000154686 ENSGT00940000153393.A ENSGT00510000048187 ENSGT00390000000724.c.b ENSGT00940000156554 ENSGT00390000002368 ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00860000135602 Mouse MODERN SPECIES 9 Cidea (ENSMUSG00000024526) Tubb6 (ENSMUSG00000001473) Afg3l2 (ENSMUSG00000024527) Prelid3a (ENSMUSG00000024530) Spire1 (ENSMUSG00000024533) Cep76 (ENSMUSG00000073542) Psmg2 (ENSMUSG00000024537) Ptpn2 (ENSMUSG00000024539) Seh1l (ENSMUSG00000079614) Cep192 (ENSMUSG00000024542) Ldlrad4 (ENSMUSG00000024544) Fam210a (ENSMUSG00000038121) Rnmt (ENSMUSG00000009535) Mc5r (ENSMUSG00000007480) Mc2r (ENSMUSG00000045569) Tcf4 (ENSMUSG00000053477) #22 Ccdc68 (ENSMUSG00000038903) #23 Rab27b (ENSMUSG00000024511) #24 Dynap (ENSMUSG00000024512) #25 4930503L19Rik (ENSMUSG00000044906) #26 Stard6 (ENSMUSG00000079608) #27 Poli (ENSMUSG00000038425) #28 Mbd2 (ENSMUSG00000024513) #29 Dcc (ENSMUSG00000060534) Mex3c (ENSMUSG00000037253) Smad4 (ENSMUSG00000024515) Elac1 (ENSMUSG00000036941) Me2 (ENSMUSG00000024556) Mro (ENSMUSG00000064036) Mapk4 (ENSMUSG00000024558) Ska1 (ENSMUSG00000036223) Mus_C ANCESTRAL SPECIES 16 ENSGT00940000159977 ENSGT00940000159566 ENSGT00950000182810.A.a.b ENSGT00390000003058.a ENSGT00390000000781 ENSGT00390000018415 ENSGT00940000154686 ENSGT00940000153393.A ENSGT00510000048187 ENSGT00390000000724.c.b ENSGT00940000156554 ENSGT00390000002368 ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00860000135959 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00860000135602 spretus MODERN SPECIES 9 Tubb6 (MGP_SPRETEiJ_G0023279) Afg3l2 (MGP_SPRETEiJ_G0023280) Spire1 (MGP_SPRETEiJ_G0023281) MGP_SPRETEiJ_G0023282 Cep76 (MGP_SPRETEiJ_G0023283) Psmg2 (MGP_SPRETEiJ_G0023284) Ptpn2 (MGP_SPRETEiJ_G0023285) Seh1l (MGP_SPRETEiJ_G0023286) Cep192 (MGP_SPRETEiJ_G0023287) Ldlrad4 (MGP_SPRETEiJ_G0023288) Fam210a (MGP_SPRETEiJ_G0023289) Rnmt (MGP_SPRETEiJ_G0023290) Mc5r (MGP_SPRETEiJ_G0023291) Mc2r (MGP_SPRETEiJ_G0023292) MGP_SPRETEiJ_G0023293 Tcf4 (MGP_SPRETEiJ_G0023294) #22 Ccdc68 (MGP_SPRETEiJ_G0023295) #23 Rab27b (MGP_SPRETEiJ_G0023296) #24 Dynap (MGP_SPRETEiJ_G0023297) #25 4930503L19Rik (MGP_SPRETEiJ_G0023298) #26 Stard6 (MGP_SPRETEiJ_G0023299) #27 Poli (MGP_SPRETEiJ_G0023300) #28 Mbd2 (MGP_SPRETEiJ_G0023301) #29 Dcc (MGP_SPRETEiJ_G0023302) Mex3c (MGP_SPRETEiJ_G0023303) Mbd1 (MGP_SPRETEiJ_G0023304) ##29 Smad4 (MGP_SPRETEiJ_G0023305) Elac1 (MGP_SPRETEiJ_G0023306) Me2 (MGP_SPRETEiJ_G0023307) Mro (MGP_SPRETEiJ_G0023308) Mapk4 (MGP_SPRETEiJ_G0023309) Steppe mouse MODERN SPECIES 2814 Tcf4 (ENSMSIG00000003748) #22 Ryukyu mouse MODERN SPECIES 9 Tubb6 (MGP_CAROLIEiJ_G0022367) MGP_CAROLIEiJ_G0022368 MGP_CAROLIEiJ_G0022369 MGP_CAROLIEiJ_G0022370 Cep76 (MGP_CAROLIEiJ_G0022371) Psmg2 (MGP_CAROLIEiJ_G0022372) Ptpn2 (MGP_CAROLIEiJ_G0022373) Seh1l (MGP_CAROLIEiJ_G0022374) Cep192 (MGP_CAROLIEiJ_G0022375) Ldlrad4 (MGP_CAROLIEiJ_G0022376) Fam210a (MGP_CAROLIEiJ_G0022377) Rnmt (MGP_CAROLIEiJ_G0022378) Mc5r (MGP_CAROLIEiJ_G0022379) Mc2r (MGP_CAROLIEiJ_G0022380) MGP_CAROLIEiJ_G0022381 Tcf4 (MGP_CAROLIEiJ_G0022382) #22 Ccdc68 (MGP_CAROLIEiJ_G0022383) #23 Rab27b (MGP_CAROLIEiJ_G0022384) #24 Dynap (MGP_CAROLIEiJ_G0022385) #25 4930503L19Rik (MGP_CAROLIEiJ_G0022386) #26 Stard6 (MGP_CAROLIEiJ_G0022387) #27 Poli (MGP_CAROLIEiJ_G0022388) #28 Mbd2 (MGP_CAROLIEiJ_G0022389) #29 Dcc (MGP_CAROLIEiJ_G0022390) Mex3c (MGP_CAROLIEiJ_G0022391) Smad4 (MGP_CAROLIEiJ_G0022392) Elac1 (MGP_CAROLIEiJ_G0022393) Me2 (MGP_CAROLIEiJ_G0022394) Mro (MGP_CAROLIEiJ_G0022395) Mapk4 (MGP_CAROLIEiJ_G0022396) MGP_CAROLIEiJ_G0022397 Shrew mouse MODERN SPECIES 6 Cidea (MGP_PahariEiJ_G0019095) Tubb6 (MGP_PahariEiJ_G0019096) Afg3l2 (MGP_PahariEiJ_G0019097) MGP_PahariEiJ_G0019098 Spire1 (MGP_PahariEiJ_G0019099) Cep76 (MGP_PahariEiJ_G0019100) Psmg2 (MGP_PahariEiJ_G0019101) Ptpn2 (MGP_PahariEiJ_G0019102) Seh1l (MGP_PahariEiJ_G0019103) Cep192 (MGP_PahariEiJ_G0019104) Ldlrad4 (MGP_PahariEiJ_G0019105) Fam210a (MGP_PahariEiJ_G0019106) Rnmt (MGP_PahariEiJ_G0019107) Mc5r (MGP_PahariEiJ_G0019108) Mc2r (MGP_PahariEiJ_G0019109) Tcf4 (MGP_PahariEiJ_G0019110) #22 Ccdc68 (MGP_PahariEiJ_G0019111) #23 Rab27b (MGP_PahariEiJ_G0019112) #24 Dynap (MGP_PahariEiJ_G0019113) #25 4930503L19Rik (MGP_PahariEiJ_G0019114) #26 Stard6 (MGP_PahariEiJ_G0019115) #27 Poli (MGP_PahariEiJ_G0019116) #28 Mbd2 (MGP_PahariEiJ_G0019117) #29 Dcc (MGP_PahariEiJ_G0019118) Mex3c (MGP_PahariEiJ_G0019119) Smad4 (MGP_PahariEiJ_G0019120) Elac1 (MGP_PahariEiJ_G0019121) Me2 (MGP_PahariEiJ_G0019122) MGP_PahariEiJ_G0019123 Mapk4 (MGP_PahariEiJ_G0019124) MGP_PahariEiJ_G0019125 Rat DUPLICATION Rat MODERN SPECIES 9 Cidea (ENSRNOG00000018505) Tubb6 (ENSRNOG00000018371) Afg3l2 (ENSRNOG00000017965) Prelid3a (ENSRNOG00000017954) Spire1 (ENSRNOG00000025324) Cep76 (ENSRNOG00000021918) Psmg2 (ENSRNOG00000017729) Ptpn2 (ENSRNOG00000017453) Cep192 (ENSRNOG00000042879) Ldlrad4 (ENSRNOG00000016879) AABR07032392.1 (ENSRNOG00000048704) Fam210a (ENSRNOG00000068859) Rnmt (ENSRNOG00000016698) Mc5r (ENSRNOG00000016685) Mc2r (ENSRNOG00000016681) Tcf4 (ENSRNOG00000012405) #22 Ccdc68 (ENSRNOG00000021381) #23 Rab27b (ENSRNOG00000012176) #24 Dynapl1 (ENSRNOG00000028712) #25 Dynap (ENSRNOG00000063474) LOC361346 (ENSRNOG00000028677) #26 Stard6 (ENSRNOG00000026324) #27 Poli (ENSRNOG00000012111) #28 Mbd2 (ENSRNOG00000011853) #29 AABR07032453.1 (ENSRNOG00000038592) ENSRNOG00000063041 Dcc (ENSRNOG00000033099) AABR07032457.1 (ENSRNOG00000015806) Mex3c (ENSRNOG00000015777) Smad4 (ENSRNOG00000051965) Elac1 (ENSRNOG00000000113) Rat MODERN SPECIES 4 Serpinb12 (ENSRNOG00000002602) Serpinb13 (ENSRNOG00000028194) Serpinb3a (ENSRNOG00000066913) Serpinb3 (ENSRNOG00000070387) Serpinb11 (ENSRNOG00000002583) Serpinb7 (ENSRNOG00000002555) Serpinb2 (ENSRNOG00000002460) Serpinb10 (ENSRNOG00000002417) Serpinb8 (ENSRNOG00000002396) RGD1560523 (ENSRNOG00000028513) LOC108348870 (ENSRNOG00000029410) ENSRNOG00000063241 Cdh7 (ENSRNOG00000032490) Cdh19 (ENSRNOG00000029841) LOC120096235 (ENSRNOG00000070646) ENSRNOG00000069109 #22 ENSRNOG00000070301 Tsn (ENSRNOG00000002319) Nifk (ENSRNOG00000025701) Clasp1 (ENSRNOG00000002376) Tfcp2l1 (ENSRNOG00000002414) Gli2 (ENSRNOG00000007261) ENSRNOG00000070618 Inhbb (ENSRNOG00000060237) Ralb (ENSRNOG00000002440) Tmem185b (ENSRNOG00000067956) Epb41l5 (ENSRNOG00000002538) Ptpn4 (ENSRNOG00000002625) Tmem177 (ENSRNOG00000025484) Cfap221 (ENSRNOG00000056781) Sctr (ENSRNOG00000049766) Cricetidae ANCESTRAL SPECIES 18 ENSGT00390000018596.A.b ENSGT00940000159977 ENSGT00940000159566 ENSGT00950000182810.A.a.b ENSGT00390000003058.a ENSGT00390000000781 ENSGT00390000018415 ENSGT00940000154686 ENSGT00940000153393.A ENSGT00510000048187 ENSGT00390000000724.c.b ENSGT00940000156554 ENSGT00390000002368 ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Cricetidae_B ANCESTRAL SPECIES 15 ENSGT00390000018596.A.b ENSGT00940000159977 ENSGT00940000159566 ENSGT00950000182810.A.a.b ENSGT00390000003058.a ENSGT00390000000781 ENSGT00390000018415 ENSGT00940000154686 ENSGT00940000153393.A ENSGT00510000048187 ENSGT00390000000724.c.b ENSGT00940000156554 ENSGT00390000002368 ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Northern American deer mouse MODERN SPECIES 10 Tubb6 (ENSPEMG00000011359) Afg3l2 (ENSPEMG00000010527) Prelid3a (ENSPEMG00000000793) Spire1 (ENSPEMG00000021319) ENSPEMG00000025287 Cep76 (ENSPEMG00000020747) Psmg2 (ENSPEMG00000015918) Ptpn2 (ENSPEMG00000020303) Seh1l (ENSPEMG00000003757) Cep192 (ENSPEMG00000022380) Ldlrad4 (ENSPEMG00000009004) Fam210a (ENSPEMG00000020500) Rnmt (ENSPEMG00000022773) Mc5r (ENSPEMG00000027856) Mc2r (ENSPEMG00000030436) Tcf4 (ENSPEMG00000013345) #22 Ccdc68 (ENSPEMG00000021062) #23 Rab27b (ENSPEMG00000028957) #24 Dynap (ENSPEMG00000020998) #25 4930503L19Rik (ENSPEMG00000011941) #26 ENSPEMG00000030755 Stard6 (ENSPEMG00000020516) #27 Poli (ENSPEMG00000016273) #28 Mbd2 (ENSPEMG00000020730) #29 Dcc (ENSPEMG00000020947) ENSPEMG00000003058 ENSPEMG00000022227 Smad4 (ENSPEMG00000013699) Elac1 (ENSPEMG00000002394) Me2 (ENSPEMG00000031101) Mro (ENSPEMG00000022802) Prairie vole MODERN SPECIES 5 Afg3l2 (ENSMOCG00000005672) Prelid3a (ENSMOCG00000013043) Spire1 (ENSMOCG00000008100) Cep76 (ENSMOCG00000000923) Psmg2 (ENSMOCG00000003853) Ptpn2 (ENSMOCG00000018246) ENSMOCG00000002453 ENSMOCG00000020585 Seh1l (ENSMOCG00000020838) Cep192 (ENSMOCG00000018904) Ldlrad4 (ENSMOCG00000016058) Fam210a (ENSMOCG00000020914) Rnmt (ENSMOCG00000011156) Mc5r (ENSMOCG00000014761) Mc2r (ENSMOCG00000002000) ENSMOCG00000016473 #22 Ccdc68 (ENSMOCG00000021806) #23 Rab27b (ENSMOCG00000017027) #24 Dynap (ENSMOCG00000013696) #25 ENSMOCG00000013893 #26 Stard6 (ENSMOCG00000022986) #27 Poli (ENSMOCG00000018932) #28 Mbd2 (ENSMOCG00000016997) #29 ENSMOCG00000002868 Dcc (ENSMOCG00000002873) Mex3c (ENSMOCG00000012424) Smad4 (ENSMOCG00000014880) Elac1 (ENSMOCG00000013625) ENSMOCG00000019370 Mro (ENSMOCG00000001134) Mapk4 (ENSMOCG00000017622) Cricetinae ANCESTRAL SPECIES 14 ENSGT00390000018596.A.b ENSGT00940000159977 ENSGT00940000159566 ENSGT00950000182810.A.a.b ENSGT00390000003058.a ENSGT00390000000781 ENSGT00390000018415 ENSGT00940000154686 ENSGT00940000153393.A ENSGT00510000048187 ENSGT00390000000724.c.b ENSGT00940000156554 ENSGT00390000002368 ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Golden Hamster MODERN SPECIES 665 Tubb6 (ENSMAUG00000000304) ENSMAUG00000017978 Prelid3a (ENSMAUG00000017262) Spire1 (ENSMAUG00000012928) Cep76 (ENSMAUG00000011313) Psmg2 (ENSMAUG00000008209) Ptpn2 (ENSMAUG00000012805) Seh1l (ENSMAUG00000015884) Cep192 (ENSMAUG00000001097) ENSMAUG00000017918 Ldlrad4 (ENSMAUG00000005521) Fam210a (ENSMAUG00000009871) Rnmt (ENSMAUG00000000955) Mc5r (ENSMAUG00000013259) Mc2r (ENSMAUG00000016719) Tcf4 (ENSMAUG00000015171) #22 Ccdc68 (ENSMAUG00000016227) #23 Rab27b (ENSMAUG00000012806) #24 Dynap (ENSMAUG00000000151) #25 4930503L19Rik (ENSMAUG00000000703) #26 ENSMAUG00000009525 #27 Poli (ENSMAUG00000012508) #28 Mbd2 (ENSMAUG00000013342) #29 ENSMAUG00000011525 Dcc (ENSMAUG00000009021) Mex3c (ENSMAUG00000016546) Smad4 (ENSMAUG00000009716) ENSMAUG00000008737 Mro (ENSMAUG00000012639) Chinese hamster chok1gshd MODERN SPECIES 153 Cidea (ENSCGRG00001024410) Tubb6 (ENSCGRG00001024011) Afg3l2 (ENSCGRG00001010234) Prelid3a (ENSCGRG00001018127) Spire1 (ENSCGRG00001010995) ENSCGRG00001023748 ENSCGRG00001018906 Ptpn2 (ENSCGRG00001017777) ENSCGRG00001002019 Cep192 (ENSCGRG00001007358) Ldlrad4 (ENSCGRG00001021830) Fam210a (ENSCGRG00001013093) Rnmt (ENSCGRG00001024115) Mc5r (ENSCGRG00001008528) Mc2r (ENSCGRG00001008067) Tcf4 (ENSCGRG00001010425) #22 Ccdc68 (ENSCGRG00001016970) #23 Rab27b (ENSCGRG00001006027) #24 Dynap (ENSCGRG00001023476) #25 4930503L19Rik (ENSCGRG00001010669) #26 Poli (ENSCGRG00001024509) #28 Mbd2 (ENSCGRG00001017384) #29 ENSCGRG00001004249 Dcc (ENSCGRG00001019199) Mex3c (ENSCGRG00001014162) Smad4 (ENSCGRG00001022246) Elac1 (ENSCGRG00001008766) Me2 (ENSCGRG00001023816) Mro (ENSCGRG00001020055) Mapk4 (ENSCGRG00001013070) Ska1 (ENSCGRG00001004278) Lesser Egyptian jerboa MODERN SPECIES 55 Grp (ENSJJAG00000022135) Sec11c (ENSJJAG00000019294) Oacyl (ENSJJAG00000016319) Zfp532 (ENSJJAG00000009613) Malt1 (ENSJJAG00000016390) Alpk2 (ENSJJAG00000013993) Nedd4l (ENSJJAG00000020973) Atp8b1 (ENSJJAG00000012498) Nars (ENSJJAG00000017350) Fech (ENSJJAG00000011444) Onecut2 (ENSJJAG00000017927) St8sia3 (ENSJJAG00000016099) ENSJJAG00000013165 ENSJJAG00000014521 Txnl1 (ENSJJAG00000016664) Tcf4 (ENSJJAG00000018021) #22 ENSJJAG00000011980 Ccdc68 (ENSJJAG00000020246) #23 Rab27b (ENSJJAG00000019754) #24 ENSJJAG00000020176 Dynap (ENSJJAG00000011504) #25 4930503L19Rik (ENSJJAG00000010721) #26 Stard6 (ENSJJAG00000023620) #27 Mbd2 (ENSJJAG00000024363) #29 Kangaroo rat MODERN SPECIES 362 Cplx4 (ENSDORG00000011953) Rax (ENSDORG00000011950) Sec11c (ENSDORG00000005523) ENSDORG00000025013 ENSDORG00000004740 Malt1 (ENSDORG00000016659) Alpk2 (ENSDORG00000023625) Nedd4l (ENSDORG00000016653) Atp8b1 (ENSDORG00000011543) Nars (ENSDORG00000011542) Fech (ENSDORG00000002794) Onecut2 (ENSDORG00000008672) St8sia3 (ENSDORG00000027411) Wdr7 (ENSDORG00000010463) Txnl1 (ENSDORG00000010462) Tcf4 (ENSDORG00000012697) #22 Ccdc68 (ENSDORG00000012696) #23 Rab27b (ENSDORG00000027027) #24 4930503L19Rik (ENSDORG00000015771) #26 ENSDORG00000023494 #27 Poli (ENSDORG00000015768) #28 Mbd2 (ENSDORG00000029792) #29 Dcc (ENSDORG00000001861) Mex3c (ENSDORG00000025473) Smad4 (ENSDORG00000009089) Elac1 (ENSDORG00000025215) ENSDORG00000024602 Me2 (ENSDORG00000010848) Mro (ENSDORG00000004230) ENSDORG00000028529 ENSDORG00000013704 Rodentia_A ANCESTRAL SPECIES 23 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Sciuridae ANCESTRAL SPECIES 31 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E.z.b ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Eurasian red squirrel MODERN SPECIES 4 SEC11C (ENSSVLG00005025599) ENSSVLG00005025583 ZNF532 (ENSSVLG00005025563) MALT1 (ENSSVLG00005025526) ALPK2 (ENSSVLG00005025494) NEDD4L (ENSSVLG00005025358) ATP8B1 (ENSSVLG00005025240) NARS1 (ENSSVLG00005025212) FECH (ENSSVLG00005025183) ONECUT2 (ENSSVLG00005025166) ENSSVLG00005025154 ST8SIA3 (ENSSVLG00005025139) WDR7 (ENSSVLG00005025038) TXNL1 (ENSSVLG00005024925) ENSSVLG00005024898 TCF4 (ENSSVLG00005024848) #22 CCDC68 (ENSSVLG00005024659) #23 RAB27B (ENSSVLG00005024625) #24 ENSSVLG00005024579 ENSSVLG00005024483 #26 STARD6 (ENSSVLG00005024449) #27 POLI (ENSSVLG00005024347) #28 MBD2 (ENSSVLG00005024263) #29 ENSSVLG00005024226 DCC (ENSSVLG00005023748) ENSSVLG00005023623 SMAD4 (ENSSVLG00005023577) ELAC1 (ENSSVLG00005023532) ENSSVLG00005022892 MRO (ENSSVLG00005022669) MAPK4 (ENSSVLG00005022625) Marmotini ANCESTRAL SPECIES 31 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E.z.b ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788.c #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Alpin marmot MODERN SPECIES 10 GRP (ENSMMMG00000003828) SEC11C (ENSMMMG00000003846) ENSMMMG00000003885 ZNF532 (ENSMMMG00000003901) MALT1 (ENSMMMG00000003964) ALPK2 (ENSMMMG00000004026) NEDD4L (ENSMMMG00000004074) ATP8B1 (ENSMMMG00000004400) ENSMMMG00000004446 FECH (ENSMMMG00000004463) ONECUT2 (ENSMMMG00000004476) ST8SIA3 (ENSMMMG00000004494) WDR7 (ENSMMMG00000004539) TXNL1 (ENSMMMG00000004568) ENSMMMG00000004624 TCF4 (ENSMMMG00000004681) #22 CCDC68 (ENSMMMG00000005084) #23 RAB27B (ENSMMMG00000005138) #24 ENSMMMG00000005165 #25 C18orf54 (ENSMMMG00000005170) #26 STARD6 (ENSMMMG00000005217) #27 POLI (ENSMMMG00000005242) #28 MBD2 (ENSMMMG00000005285) #29 ENSMMMG00000005475 DCC (ENSMMMG00000005526) MEX3C (ENSMMMG00000005613) SMAD4 (ENSMMMG00000005628) ELAC1 (ENSMMMG00000005660) ME2 (ENSMMMG00000005680) MRO (ENSMMMG00000005705) MAPK4 (ENSMMMG00000005718) Marmotini_b ANCESTRAL SPECIES 80 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E.z.b ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788.c #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Squirrel MODERN SPECIES 97 RAX (ENSSTOG00000013122) GRP (ENSSTOG00000013119) SEC11C (ENSSTOG00000030761) ENSSTOG00000024496 ZNF532 (ENSSTOG00000023882) MALT1 (ENSSTOG00000022780) ALPK2 (ENSSTOG00000025921) NEDD4L (ENSSTOG00000012833) ATP8B1 (ENSSTOG00000003397) NARS1 (ENSSTOG00000002118) FECH (ENSSTOG00000002138) ONECUT2 (ENSSTOG00000020775) ST8SIA3 (ENSSTOG00000012260) WDR7 (ENSSTOG00000012129) TXNL1 (ENSSTOG00000000075) TCF4 (ENSSTOG00000005134) #22 CCDC68 (ENSSTOG00000003417) #23 RAB27B (ENSSTOG00000003409) #24 ENSSTOG00000032190 C18orf54 (ENSSTOG00000010907) #26 STARD6 (ENSSTOG00000004409) #27 POLI (ENSSTOG00000004392) #28 MBD2 (ENSSTOG00000011253) #29 DCC (ENSSTOG00000003557) MEX3C (ENSSTOG00000022325) SMAD4 (ENSSTOG00000028580) ELAC1 (ENSSTOG00000010591) ME2 (ENSSTOG00000027218) MRO (ENSSTOG00000009940) MAPK4 (ENSSTOG00000022822) SKA1 (ENSSTOG00000003367) Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 437 TCF4 (ENSUPAG00010000299) #22 CCDC68 (ENSUPAG00010000366) #23 RAB27B (ENSUPAG00010000401) #24 C18orf54 (ENSUPAG00010000428) #26 ENSUPAG00010000547 #27 POLI (ENSUPAG00010000594) #28 MBD2 (ENSUPAG00010000630) #29 Arctic ground squirrel MODERN SPECIES 117 GRP (ENSUPAG00010012227) SEC11C (ENSUPAG00010012235) ENSUPAG00010012243 ZNF532 (ENSUPAG00010012264) MALT1 (ENSUPAG00010012381) ALPK2 (ENSUPAG00010012428) NEDD4L (ENSUPAG00010012447) ATP8B1 (ENSUPAG00010013136) NARS1 (ENSUPAG00010013179) FECH (ENSUPAG00010013194) ONECUT2 (ENSUPAG00010013216) ST8SIA3 (ENSUPAG00010013223) WDR7 (ENSUPAG00010013237) TXNL1 (ENSUPAG00010013287) ENSUPAG00010013334 ENSUPAG00010013337 #22 Hystricomorpha ANCESTRAL SPECIES 32 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Hystricomorpha_a ANCESTRAL SPECIES 26 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Hystricomorpha_b ANCESTRAL SPECIES 21 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Long-tailed chinchilla MODERN SPECIES 109 SEC11C (ENSCLAG00000009984) ENSCLAG00000008279 ZNF532 (ENSCLAG00000007304) MALT1 (ENSCLAG00000015362) ALPK2 (ENSCLAG00000007258) NEDD4L (ENSCLAG00000008387) ENSCLAG00000007106 ATP8B1 (ENSCLAG00000013541) ENSCLAG00000017930 NARS1 (ENSCLAG00000009270) FECH (ENSCLAG00000012523) ONECUT2 (ENSCLAG00000011237) ST8SIA3 (ENSCLAG00000013101) WDR7 (ENSCLAG00000014269) TXNL1 (ENSCLAG00000009681) TCF4 (ENSCLAG00000008071) #22 CCDC68 (ENSCLAG00000008020) #23 RAB27B (ENSCLAG00000007524) #24 ENSCLAG00000007044 #25 C18orf54 (ENSCLAG00000016460) #26 STARD6 (ENSCLAG00000015966) #27 POLI (ENSCLAG00000015942) #28 MBD2 (ENSCLAG00000010471) #29 ENSCLAG00000017775 DCC (ENSCLAG00000008360) ENSCLAG00000007427 MEX3C (ENSCLAG00000006969) SMAD4 (ENSCLAG00000009301) ELAC1 (ENSCLAG00000008334) ENSCLAG00000007635 MRO (ENSCLAG00000007658) Degu MODERN SPECIES 44 ENSODEG00000018477 ENSODEG00000020484 ENSODEG00000018478 ENSODEG00000018473 NEDD4L (ENSODEG00000018489) ENSODEG00000018397 ATP8B1 (ENSODEG00000018480) ENSODEG00000020521 ENSODEG00000018440 FECH (ENSODEG00000018475) ONECUT2 (ENSODEG00000018371) ST8SIA3 (ENSODEG00000018358) WDR7 (ENSODEG00000018485) TXNL1 (ENSODEG00000018479) TCF4 (ENSODEG00000018490) #22 CCDC68 (ENSODEG00000018403) #23 RAB27B (ENSODEG00000018439) #24 ENSODEG00000018409 C18orf54 (ENSODEG00000018408) #26 STARD6 (ENSODEG00000018474) #27 ENSODEG00000018399 MBD2 (ENSODEG00000018422) #29 ENSODEG00000018470 ENSODEG00000018471 DCC (ENSODEG00000018488) ENSODEG00000018425 MEX3C (ENSODEG00000018398) SMAD4 (ENSODEG00000018472) ELAC1 (ENSODEG00000018368) ME2 (ENSODEG00000018322) Guinea pig MODERN SPECIES 14 SEC11C (ENSCPOG00000011924) ENSCPOG00000024696 ZNF532 (ENSCPOG00000005888) MALT1 (ENSCPOG00000012493) ALPK2 (ENSCPOG00000039062) NEDD4L (ENSCPOG00000008618) ATP8B1 (ENSCPOG00000006375) ENSCPOG00000013227 ENSCPOG00000040580 FECH (ENSCPOG00000013224) ONECUT2 (ENSCPOG00000000055) ST8SIA3 (ENSCPOG00000021002) WDR7 (ENSCPOG00000008220) TXNL1 (ENSCPOG00000032075) ENSCPOG00000008145 TCF4 (ENSCPOG00000005267) #22 CCDC68 (ENSCPOG00000003569) #23 RAB27B (ENSCPOG00000034520) #24 STARD6 (ENSCPOG00000040582) #27 POLI (ENSCPOG00000037626) #28 MBD2 (ENSCPOG00000006832) #29 DCC (ENSCPOG00000002018) MEX3C (ENSCPOG00000009646) SMAD4 (ENSCPOG00000006470) ELAC1 (ENSCPOG00000012588) ME2 (ENSCPOG00000012583) MRO (ENSCPOG00000005618) MAPK4 (ENSCPOG00000010565) SKA1 (ENSCPOG00000013281) CXXC1 (ENSCPOG00000020250) MBD1 (ENSCPOG00000001671) ##29 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 9 ENSHGLG00000042743 ENSHGLG00000034479 ENSHGLG00000045349 NEDD4L (ENSHGLG00000001837) ENSHGLG00000001533 ATP8B1 (ENSHGLG00000003136) NARS1 (ENSHGLG00000003044) Fech (ENSHGLG00000034674) ST8SIA3 (ENSHGLG00000037037) ENSHGLG00000012747 WDR7 (ENSHGLG00000002483) TXNL1 (ENSHGLG00000001313) ENSHGLG00000032821 ENSHGLG00000000961 ENSHGLG00000043306 TCF4 (ENSHGLG00000012941) #22 ENSHGLG00000041819 ENSHGLG00000011116 #23 ENSHGLG00000037455 #24 ENSHGLG00000046518 ENSHGLG00000047458 Naked mole-rat female MODERN SPECIES 3 ENSHGLG00000035524 TMEM38B (ENSHGLG00000046627) TAL2 (ENSHGLG00000045987) FKTN (ENSHGLG00000018225) FSD1L (ENSHGLG00000009018) SLC44A1 (ENSHGLG00000005616) ABCA1 (ENSHGLG00000011444) ENSHGLG00000047217 ENSHGLG00000034042 OR13D1 (ENSHGLG00000020669) ENSHGLG00000004704 ENSHGLG00000049175 OR13C3 (ENSHGLG00000020079) OR13C4 (ENSHGLG00000047893) OR13F1 (ENSHGLG00000005682) ENSHGLG00000032079 #22 ENSHGLG00000049812 SMC2 (ENSHGLG00000007747) ENSHGLG00000049087 ENSHGLG00000012037 ENSHGLG00000041020 ENSHGLG00000008760 ENSHGLG00000032676 GRIN3A (ENSHGLG00000014346) RNF20 (ENSHGLG00000016128) PGAP4 (ENSHGLG00000008776) ALDOB (ENSHGLG00000010812) ZNF189 (ENSHGLG00000011643) MRPL50 (ENSHGLG00000004483) ENSHGLG00000042541 BAAT (ENSHGLG00000006846) Lagomorpha ANCESTRAL SPECIES 29 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Pika MODERN SPECIES 3731 TCF4 (ENSOPRG00000016862) #22 CCDC68 (ENSOPRG00000016855) #23 RAB27B (ENSOPRG00000016848) #24 Rabbit MODERN SPECIES 20 GRP (ENSOCUG00000009211) SEC11C (ENSOCUG00000009204) ENSOCUG00000023701 ZNF532 (ENSOCUG00000014396) MALT1 (ENSOCUG00000007831) ALPK2 (ENSOCUG00000012324) NEDD4L (ENSOCUG00000014471) ATP8B1 (ENSOCUG00000009625) NARS1 (ENSOCUG00000003025) FECH (ENSOCUG00000003020) ONECUT2 (ENSOCUG00000021525) ST8SIA3 (ENSOCUG00000011662) WDR7 (ENSOCUG00000002512) TXNL1 (ENSOCUG00000002505) ENSOCUG00000037878 TCF4 (ENSOCUG00000002669) #22 CCDC68 (ENSOCUG00000014516) #23 RAB27B (ENSOCUG00000022858) #24 ENSOCUG00000030546 #25 ENSOCUG00000033740 C18orf54 (ENSOCUG00000015283) #26 STARD6 (ENSOCUG00000029013) #27 ENSOCUG00000003746 #28 MBD2 (ENSOCUG00000021080) #29 ENSOCUG00000033920 DCC (ENSOCUG00000000384) ENSOCUG00000038228 MEX3C (ENSOCUG00000012549) SMAD4 (ENSOCUG00000003929) ELAC1 (ENSOCUG00000009509) ME2 (ENSOCUG00000012433) Tree shrew MODERN SPECIES 4909 TCF4 (ENSTBEG00000015498) #22 Primates ANCESTRAL SPECIES 24 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Haplorrhini ANCESTRAL SPECIES 25 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Tarsier MODERN SPECIES 3715 TCF4 (ENSTSYG00000009542) #22 CCDC68 (ENSTSYG00000010218) #23 RAB27B (ENSTSYG00000010217) #24 Simiiformes ANCESTRAL SPECIES 24 ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00530000064130.c.b ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00910000147117 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000154979.s.b ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Platyrrhini ANCESTRAL SPECIES 26 ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437.kc ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873.i ENSGT00530000064130.c.b.b ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00910000147117 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301.t ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000154430.e.a ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 714 TCF4 (ENSANAG00000031962) #22 CCDC68 (ENSANAG00000025839) #23 RAB27B (ENSANAG00000025096) #24 ENSANAG00000019712 DYNAP (ENSANAG00000027647) C18orf54 (ENSANAG00000027978) #26 STARD6 (ENSANAG00000025071) #27 POLI (ENSANAG00000024794) #28 MBD2 (ENSANAG00000030070) #29 DCC (ENSANAG00000025332) ENSANAG00000020330 MEX3C (ENSANAG00000031189) SMAD4 (ENSANAG00000025293) ELAC1 (ENSANAG00000035626) ME2 (ENSANAG00000024499) MRO (ENSANAG00000033105) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1058 ENSANAG00000023605 ENSANAG00000021794 ENSANAG00000021047 ENSANAG00000031115 #22 ENSANAG00000027267 Mas night monkey MODERN SPECIES 597 GRP (ENSANAG00000022741) SEC11C (ENSANAG00000030193) ENSANAG00000035761 MALT1 (ENSANAG00000036321) ALPK2 (ENSANAG00000026904) NEDD4L (ENSANAG00000023891) ENSANAG00000025061 ATP8B1 (ENSANAG00000036784) ENSANAG00000030611 FECH (ENSANAG00000036608) ONECUT2 (ENSANAG00000036922) ST8SIA3 (ENSANAG00000030744) WDR7 (ENSANAG00000016243) TXNL1 (ENSANAG00000032872) ENSANAG00000023252 ENSANAG00000037799 #22 Cebidae ANCESTRAL SPECIES 28 ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437.kc ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873.i ENSGT00530000064130.c.b.b ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00910000147117 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301.t ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000154430.e.a ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Cebidae_a ANCESTRAL SPECIES 23 ENSGT00390000004950.k.a ENSGT00390000015600.c.b ENSGT00940000154437.kc ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873.i ENSGT00530000064130.c.b.b ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00910000147117 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301.t ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000154430.e.a ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Capuchin MODERN SPECIES 236 WDR7 (ENSCCAG00000037647) ENSCCAG00000022499 ENSCCAG00000037008 TCF4 (ENSCCAG00000031227) #22 CCDC68 (ENSCCAG00000005458) #23 RAB27B (ENSCCAG00000027116) #24 Bolivian squirrel monkey MODERN SPECIES 58 ENSSBOG00000032685 SEC11C (ENSSBOG00000030769) ZNF532 (ENSSBOG00000033105) MALT1 (ENSSBOG00000035150) ALPK2 (ENSSBOG00000020381) NEDD4L (ENSSBOG00000034601) ENSSBOG00000003355 ATP8B1 (ENSSBOG00000032194) NARS1 (ENSSBOG00000020784) FECH (ENSSBOG00000021150) ENSSBOG00000029218 ONECUT2 (ENSSBOG00000031074) ST8SIA3 (ENSSBOG00000031460) WDR7 (ENSSBOG00000031603) TXNL1 (ENSSBOG00000028008) TCF4 (ENSSBOG00000021853) #22 CCDC68 (ENSSBOG00000036015) #23 RAB27B (ENSSBOG00000032536) #24 DYNAP (ENSSBOG00000032272) C18orf54 (ENSSBOG00000026155) #26 STARD6 (ENSSBOG00000020117) #27 ENSSBOG00000025779 POLI (ENSSBOG00000025500) #28 MBD2 (ENSSBOG00000011611) #29 DCC (ENSSBOG00000032419) ENSSBOG00000032319 ENSSBOG00000017363 ENSSBOG00000025727 MEX3C (ENSSBOG00000024094) SMAD4 (ENSSBOG00000029676) ELAC1 (ENSSBOG00000019881) Marmoset MODERN SPECIES 4 ZNF532 (ENSCJAG00000003543) ENSCJAG00000079527 ENSCJAG00000053059 ENSCJAG00000084842 MALT1 (ENSCJAG00000003580) ALPK2 (ENSCJAG00000003594) NEDD4L (ENSCJAG00000003597) ATP8B1 (ENSCJAG00000003813) NARS1 (ENSCJAG00000003837) FECH (ENSCJAG00000003873) ONECUT2 (ENSCJAG00000076587) ST8SIA3 (ENSCJAG00000003917) WDR7 (ENSCJAG00000003937) ENSCJAG00000034961 TXNL1 (ENSCJAG00000004012) TCF4 (ENSCJAG00000004038) #22 ENSCJAG00000086874 CCDC68 (ENSCJAG00000004164) #23 RAB27B (ENSCJAG00000004175) #24 DYNAP (ENSCJAG00000004179) ENSCJAG00000086244 C18orf54 (ENSCJAG00000001841) #26 ENSCJAG00000034626 ENSCJAG00000070038 POLI (ENSCJAG00000001851) #28 MBD2 (ENSCJAG00000040234) #29 DCC (ENSCJAG00000001868) ENSCJAG00000084840 MEX3C (ENSCJAG00000072158) SMAD4 (ENSCJAG00000001910) ELAC1 (ENSCJAG00000001925) Catarrhini ANCESTRAL SPECIES 23 ENSGT00940000154437.mc.b ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00910000147364 ENSGT00940000156873 ENSGT00530000064130.c.b ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00910000147117 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000154979.s.b ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b.o ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Cercopithecidae ANCESTRAL SPECIES 25 ENSGT00940000154437.mc.b ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00910000147364 ENSGT00530000064130.c.b ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00910000147117 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000154979.s.b ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b.o ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Cercopithecinae ANCESTRAL SPECIES 22 ENSGT00940000154437.mc.b ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00910000147364 ENSGT00530000064130.c.b ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00910000147117 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000154979.s.b.a ENSGT00940000155301 ENSGT00940000156170.e ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b.o ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Cercopithecinae_a ANCESTRAL SPECIES 21 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00910000147364 ENSGT00530000064130.c.b ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00910000147117 ENSGT00950000183103.d.a.b ENSGT00910000148258 ENSGT01030000234535.E ENSGT00940000154979.s.b.a ENSGT00940000155301 ENSGT00940000156170.e ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00950000183541 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b.o ENSGT00940000161642 ENSGT00940000159850 Macaca ANCESTRAL SPECIES 22 ENSGT00940000154437.mc.b ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00910000147364 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00910000147117 ENSGT00950000183103.d.a.b ENSGT00910000148258 ENSGT01030000234535.E ENSGT00940000154979.s.b.a ENSGT00940000155301 ENSGT00940000156170.e ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00950000183541 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b.o ENSGT00940000161642 ENSGT00940000159850 Macaca_a ANCESTRAL SPECIES 21 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437.mc.b ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170.e ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00950000183541 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b.o ENSGT00940000161642 ENSGT00940000159850 Crab-eating macaque MODERN SPECIES 9 ZNF532 (ENSMFAG00000026367) MALT1 (ENSMFAG00000042329) ALPK2 (ENSMFAG00000041202) NEDD4L (ENSMFAG00000032021) ENSMFAG00000051329 ATP8B1 (ENSMFAG00000036154) ENSMFAG00000063816 NARS1 (ENSMFAG00000032255) FECH (ENSMFAG00000016324) ONECUT2 (ENSMFAG00000032509) ST8SIA3 (ENSMFAG00000032690) ENSMFAG00000064841 WDR7 (ENSMFAG00000033483) TXNL1 (ENSMFAG00000042132) ENSMFAG00000059413 TCF4 (ENSMFAG00000036909) #22 CCDC68 (ENSMFAG00000032372) #23 ENSMFAG00000051025 RAB27B (ENSMFAG00000002806) #24 DYNAP (ENSMFAG00000034603) C18orf54 (ENSMFAG00000038588) #26 STARD6 (ENSMFAG00000046022) #27 ENSMFAG00000057960 POLI (ENSMFAG00000011788) #28 MBD2 (ENSMFAG00000030736) #29 ENSMFAG00000062197 ENSMFAG00000051166 ENSMFAG00000059397 ENSMFAG00000063986 DCC (ENSMFAG00000033415) ENSMFAG00000055405 Rhesus MODERN SPECIES 9 OACYL (ENSMMUG00000052275) ZNF532 (ENSMMUG00000001245) ENSMMUG00000065131 MALT1 (ENSMMUG00000014235) ALPK2 (ENSMMUG00000006635) NEDD4L (ENSMMUG00000006616) ATP8B1 (ENSMMUG00000019976) NARS1 (ENSMMUG00000019974) FECH (ENSMMUG00000022568) ONECUT2 (ENSMMUG00000023218) ST8SIA3 (ENSMMUG00000016110) WDR7 (ENSMMUG00000012916) TXNL1 (ENSMMUG00000012915) ENSMMUG00000060128 ENSMMUG00000064753 TCF4 (ENSMMUG00000012001) #22 CCDC68 (ENSMMUG00000021598) #23 RAB27B (ENSMMUG00000040524) #24 DYNAP (ENSMMUG00000013356) ENSMMUG00000056385 ENSMMUG00000061695 C18H18orf54 (ENSMMUG00000010914) #26 ENSMMUG00000059012 STARD6 (ENSMMUG00000010913) #27 POLI (ENSMMUG00000010911) #28 ENSMMUG00000050079 MBD2 (ENSMMUG00000003136) #29 ENSMMUG00000059274 DCC (ENSMMUG00000013999) ENSMMUG00000054260 ENSMMUG00000004431 Pig-tailed macaque MODERN SPECIES 542 ZNF532 (ENSMNEG00000038827) MALT1 (ENSMNEG00000040983) ALPK2 (ENSMNEG00000039171) NEDD4L (ENSMNEG00000034549) ENSMNEG00000038965 ATP8B1 (ENSMNEG00000033943) NARS1 (ENSMNEG00000043822) FECH (ENSMNEG00000042509) ENSMNEG00000027760 ONECUT2 (ENSMNEG00000038982) ENSMNEG00000028018 ST8SIA3 (ENSMNEG00000031703) BOD1L2 (ENSMNEG00000035128) WDR7 (ENSMNEG00000032126) TXNL1 (ENSMNEG00000028057) TCF4 (ENSMNEG00000042685) #22 CCDC68 (ENSMNEG00000028796) #23 ENSMNEG00000007868 RAB27B (ENSMNEG00000040318) #24 DYNAP (ENSMNEG00000042857) Cercopithecinae_b ANCESTRAL SPECIES 25 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00910000147364 ENSGT00530000064130.c.b ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00910000147117 ENSGT00950000183103.d.a.b ENSGT00910000148258 ENSGT01030000234535.E ENSGT00940000154979.s.b.a ENSGT00940000155301 ENSGT00940000156170.e ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00950000183541 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b.o ENSGT00940000161642 ENSGT00940000159850 Olive baboon MODERN SPECIES 10 ENSPANG00000041340 MALT1 (ENSPANG00000025283) ALPK2 (ENSPANG00000018740) NEDD4L (ENSPANG00000010022) ENSPANG00000045046 ATP8B1 (ENSPANG00000016334) NARS1 (ENSPANG00000019006) FECH (ENSPANG00000017679) ONECUT2 (ENSPANG00000031503) ST8SIA3 (ENSPANG00000006449) ENSPANG00000042168 ENSPANG00000042229 ENSPANG00000039328 WDR7 (ENSPANG00000006224) TXNL1 (ENSPANG00000005885) TCF4 (ENSPANG00000009840) #22 CCDC68 (ENSPANG00000007435) #23 RAB27B (ENSPANG00000003498) #24 DYNAP (ENSPANG00000017680) C18orf54 (ENSPANG00000007505) #26 STARD6 (ENSPANG00000032987) #27 POLI (ENSPANG00000006450) #28 ENSPANG00000051300 MBD2 (ENSPANG00000021858) #29 ENSPANG00000043603 ENSPANG00000045144 ENSPANG00000037100 DCC (ENSPANG00000006451) MEX3C (ENSPANG00000006226) SMAD4 (ENSPANG00000024703) ELAC1 (ENSPANG00000026392) Cercopithecinae_d ANCESTRAL SPECIES 97 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00910000147364 ENSGT00530000064130.c.b ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00910000147117 ENSGT00950000183103.d.a.b ENSGT00910000148258 ENSGT01030000234535.E ENSGT00940000154979.s.b.a ENSGT00940000155301 ENSGT00940000156170.e ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00950000183541 ENSGT00940000157449 #24 ENSGT00400000022381 Sooty mangabey MODERN SPECIES 151 MALT1 (ENSCATG00000040183) ALPK2 (ENSCATG00000034685) ENSCATG00000028323 NEDD4L (ENSCATG00000040788) ENSCATG00000030575 ATP8B1 (ENSCATG00000044304) NARS1 (ENSCATG00000032557) FECH (ENSCATG00000040798) ENSCATG00000017272 ONECUT2 (ENSCATG00000030281) ENSCATG00000002642 ST8SIA3 (ENSCATG00000038062) BOD1L2 (ENSCATG00000036280) WDR7 (ENSCATG00000038456) ENSCATG00000032462 TCF4 (ENSCATG00000042189) #22 CCDC68 (ENSCATG00000042998) #23 ENSCATG00000021200 RAB27B (ENSCATG00000033665) #24 DYNAP (ENSCATG00000033007) Drill MODERN SPECIES 292 SEC11C (ENSMLEG00000042418) ZNF532 (ENSMLEG00000027509) MALT1 (ENSMLEG00000042808) ALPK2 (ENSMLEG00000030763) NEDD4L (ENSMLEG00000042698) ENSMLEG00000038661 ATP8B1 (ENSMLEG00000031684) NARS1 (ENSMLEG00000015588) FECH (ENSMLEG00000033604) ENSMLEG00000003664 ONECUT2 (ENSMLEG00000034315) ENSMLEG00000007457 ST8SIA3 (ENSMLEG00000035680) WDR7 (ENSMLEG00000033750) ENSMLEG00000032223 TCF4 (ENSMLEG00000021318) #22 CCDC68 (ENSMLEG00000006027) #23 ENSMLEG00000036308 RAB27B (ENSMLEG00000031907) #24 DYNAP (ENSMLEG00000033167) Vervet Monkey MODERN SPECIES 9 SEC11C (ENSCSAG00000018166) ENSCSAG00000018165 ZNF532 (ENSCSAG00000018163) MALT1 (ENSCSAG00000018162) ALPK2 (ENSCSAG00000018160) NEDD4L (ENSCSAG00000018158) ATP8B1 (ENSCSAG00000018156) NARS1 (ENSCSAG00000018152) FECH (ENSCSAG00000018150) ONECUT2 (ENSCSAG00000018149) ENSCSAG00000018566 ST8SIA3 (ENSCSAG00000018147) BOD1L2 (ENSCSAG00000018567) WDR7 (ENSCSAG00000018146) TXNL1 (ENSCSAG00000018145) TCF4 (ENSCSAG00000018141) #22 CCDC68 (ENSCSAG00000018134) #23 RAB27B (ENSCSAG00000018126) #24 DYNAP (ENSCSAG00000018120) C18orf54 (ENSCSAG00000018117) #26 STARD6 (ENSCSAG00000018111) #27 POLI (ENSCSAG00000018108) #28 MBD2 (ENSCSAG00000018106) #29 DCC (ENSCSAG00000018101) MEX3C (ENSCSAG00000018097) SMAD4 (ENSCSAG00000018094) ENSCSAG00000018091 ELAC1 (ENSCSAG00000018090) ME2 (ENSCSAG00000018086) MRO (ENSCSAG00000018082) MAPK4 (ENSCSAG00000018078) Rhinopithecus ANCESTRAL SPECIES 753 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 Black snub-nosed monkey MODERN SPECIES 1505 ENSRBIG00000032406 TCF4 (ENSRBIG00000042342) #22 CCDC68 (ENSRBIG00000013806) #23 RAB27B (ENSRBIG00000038002) #24 Golden snub-nosed monkey MODERN SPECIES 686 TCF4 (ENSRROG00000038918) #22 ENSRROG00000030974 CCDC68 (ENSRROG00000040381) #23 RAB27B (ENSRROG00000037193) #24 DYNAP (ENSRROG00000030303) Hominoidea ANCESTRAL SPECIES 24 ENSGT00940000154437.mc.b ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00910000147364 ENSGT00940000156873 ENSGT00530000064130.c.b ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00910000147117 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000154979.s.b ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b.o ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Hominidae ANCESTRAL SPECIES 24 ENSGT00940000154437.mc.b ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00910000147364 ENSGT00530000064130.c.b ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00910000147117 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000154979.s.b ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b.o ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Homo/Pan/Gorilla group ANCESTRAL SPECIES 26 ENSGT00940000154437.mc.b ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00910000147364 ENSGT00530000064130.c.b ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00910000147117 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000154979.s.b ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b.o ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Gorilla MODERN SPECIES 9 SEC11C (ENSGGOG00000007358) ZNF532 (ENSGGOG00000026498) MALT1 (ENSGGOG00000023405) ALPK2 (ENSGGOG00000013746) ENSGGOG00000013730 ENSGGOG00000044141 ATP8B1 (ENSGGOG00000013553) NARS1 (ENSGGOG00000009419) FECH (ENSGGOG00000005554) ENSGGOG00000044119 ENSGGOG00000024651 ST8SIA3 (ENSGGOG00000042477) BOD1L2 (ENSGGOG00000026864) WDR7 (ENSGGOG00000002885) TXNL1 (ENSGGOG00000009301) TCF4 (ENSGGOG00000016297) #22 CCDC68 (ENSGGOG00000022410) #23 RAB27B (ENSGGOG00000015655) #24 DYNAP (ENSGGOG00000010826) ENSGGOG00000036639 C18orf54 (ENSGGOG00000001490) #26 ENSGGOG00000028549 #27 STARD6 (ENSGGOG00000007234) #27 POLI (ENSGGOG00000014321) #28 MBD2 (ENSGGOG00000013402) #29 DCC (ENSGGOG00000007343) ENSGGOG00000025730 ENSGGOG00000014875 ENSGGOG00000036220 SMAD4 (ENSGGOG00000013662) ELAC1 (ENSGGOG00000002624) Homo/Pan group ANCESTRAL SPECIES 25 ENSGT00940000164261.a ENSGT00390000015600.c.b ENSGT00940000154437.mc.b ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00910000147117 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000154979.s.b ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00510000046985.h.a ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b.o ENSGT00940000161642 ENSGT00940000159850 Pan ANCESTRAL SPECIES 24 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00910000147364 ENSGT00950000183105.B.a.b.a ENSGT00530000064130.c.b ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00910000147117 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000154979.s.b ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b.o ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Bonobo MODERN SPECIES 9 MALT1 (ENSPPAG00000037274) ENSPPAG00000026846 NEDD4L (ENSPPAG00000028088) ENSPPAG00000042494 ENSPPAG00000040741 ENSPPAG00000038238 ATP8B1 (ENSPPAG00000043256) NARS1 (ENSPPAG00000038949) FECH (ENSPPAG00000028098) ENSPPAG00000012630 ENSPPAG00000034611 ST8SIA3 (ENSPPAG00000025859) BOD1L2 (ENSPPAG00000041535) WDR7 (ENSPPAG00000042765) TXNL1 (ENSPPAG00000036223) ENSPPAG00000036151 #22 CCDC68 (ENSPPAG00000027404) #23 RAB27B (ENSPPAG00000038458) #24 ENSPPAG00000037542 C18orf54 (ENSPPAG00000015106) #26 STARD6 (ENSPPAG00000029738) #27 POLI (ENSPPAG00000033244) #28 ENSPPAG00000030303 #29 DCC (ENSPPAG00000036460) ENSPPAG00000038467 SMAD4 (ENSPPAG00000027913) ELAC1 (ENSPPAG00000036817) ME2 (ENSPPAG00000036244) MRO (ENSPPAG00000039840) MAPK4 (ENSPPAG00000009556) SKA1 (ENSPPAG00000035202) Chimpanzee MODERN SPECIES 9 ALPK2 (ENSPTRG00000010052) ENSPTRG00000049672 NEDD4L (ENSPTRG00000010051) ENSPTRG00000047571 ENSPTRG00000049698 ENSPTRG00000048604 ATP8B1 (ENSPTRG00000010048) NARS1 (ENSPTRG00000010047) FECH (ENSPTRG00000010045) ENSPTRG00000049370 ONECUT2 (ENSPTRG00000010044) ST8SIA3 (ENSPTRG00000049302) BOD1L2 (ENSPTRG00000041583) WDR7 (ENSPTRG00000010042) TXNL1 (ENSPTRG00000010041) TCF4 (ENSPTRG00000010040) #22 CCDC68 (ENSPTRG00000010039) #23 RAB27B (ENSPTRG00000010038) #24 DYNAP (ENSPTRG00000010037) ENSPTRG00000042762 C18H18orf54 (ENSPTRG00000010036) #26 STARD6 (ENSPTRG00000010035) #27 POLI (ENSPTRG00000010034) #28 MBD2 (ENSPTRG00000010033) #29 DCC (ENSPTRG00000010031) MEX3C (ENSPTRG00000010029) SMAD4 (ENSPTRG00000010028) ELAC1 (ENSPTRG00000010027) ME2 (ENSPTRG00000010026) MRO (ENSPTRG00000010025) MAPK4 (ENSPTRG00000010024) Human MODERN SPECIES 9 RAX (ENSG00000134438) GRP (ENSG00000134443) SEC11C (ENSG00000166562) ZNF532 (ENSG00000074657) MALT1 (ENSG00000172175) ALPK2 (ENSG00000198796) NEDD4L (ENSG00000049759) ATP8B1 (ENSG00000081923) NARS1 (ENSG00000134440) FECH (ENSG00000066926) ONECUT2 (ENSG00000119547) ST8SIA3 (ENSG00000177511) BOD1L2 (ENSG00000228075) WDR7 (ENSG00000091157) TXNL1 (ENSG00000091164) TCF4 (ENSG00000196628) #22 CCDC68 (ENSG00000166510) #23 RAB27B (ENSG00000041353) #24 DYNAP (ENSG00000178690) C18orf54 (ENSG00000166845) #26 STARD6 (ENSG00000174448) #27 POLI (ENSG00000101751) #28 MBD2 (ENSG00000134046) #29 DCC (ENSG00000187323) MEX3C (ENSG00000176624) SMAD4 (ENSG00000141646) ELAC1 (ENSG00000141642) ME2 (ENSG00000082212) MRO (ENSG00000134042) MAPK4 (ENSG00000141639) SKA1 (ENSG00000154839) Orangutan MODERN SPECIES 9 ENSPPYG00000009191 ENSPPYG00000009190 SEC11C (ENSPPYG00000009189) ZNF532 (ENSPPYG00000039792) MALT1 (ENSPPYG00000009188) ALPK2 (ENSPPYG00000009187) NEDD4L (ENSPPYG00000009186) ATP8B1 (ENSPPYG00000009183) NARS1 (ENSPPYG00000029482) FECH (ENSPPYG00000009182) ONECUT2 (ENSPPYG00000009181) ST8SIA3 (ENSPPYG00000009180) ENSPPYG00000039176 WDR7 (ENSPPYG00000009179) TXNL1 (ENSPPYG00000009178) TCF4 (ENSPPYG00000009175) #22 CCDC68 (ENSPPYG00000009174) #23 RAB27B (ENSPPYG00000009173) #24 DYNAP (ENSPPYG00000009172) ENSPPYG00000040268 C18orf54 (ENSPPYG00000009171) #26 STARD6 (ENSPPYG00000009170) #27 POLI (ENSPPYG00000009169) #28 MBD2 (ENSPPYG00000009168) #29 DCC (ENSPPYG00000009166) MEX3C (ENSPPYG00000038962) SMAD4 (ENSPPYG00000009165) ELAC1 (ENSPPYG00000029936) ME2 (ENSPPYG00000009163) MRO (ENSPPYG00000030050) ENSPPYG00000041514 Gibbon MODERN SPECIES 19 ENSNLEG00000032064 MALT1 (ENSNLEG00000008289) ALPK2 (ENSNLEG00000008284) ENSNLEG00000008123 ENSNLEG00000030394 ENSNLEG00000031673 ATP8B1 (ENSNLEG00000008100) NARS1 (ENSNLEG00000008082) FECH (ENSNLEG00000008062) ENSNLEG00000031671 ENSNLEG00000008061 ST8SIA3 (ENSNLEG00000030534) BOD1L2 (ENSNLEG00000027541) WDR7 (ENSNLEG00000008020) TXNL1 (ENSNLEG00000008009) TCF4 (ENSNLEG00000007981) #22 CCDC68 (ENSNLEG00000007972) #23 RAB27B (ENSNLEG00000007971) #24 DYNAP (ENSNLEG00000007968) STARD6 (ENSNLEG00000011931) #27 POLI (ENSNLEG00000011903) #28 ENSNLEG00000031955 #29 DCC (ENSNLEG00000011879) ENSNLEG00000029756 SMAD4 (ENSNLEG00000011859) ELAC1 (ENSNLEG00000011855) ME2 (ENSNLEG00000011833) ENSNLEG00000011826 MAPK4 (ENSNLEG00000011809) SKA1 (ENSNLEG00000011804) CXXC1 (ENSNLEG00000011746) Strepsirrhini ANCESTRAL SPECIES 22 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Lemuriformes ANCESTRAL SPECIES 25 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Mouse lemur MODERN SPECIES 10 RAX (ENSMICG00000001928) GRP (ENSMICG00000016066) SEC11C (ENSMICG00000016052) ZNF532 (ENSMICG00000016043) MALT1 (ENSMICG00000007719) ALPK2 (ENSMICG00000036841) NEDD4L (ENSMICG00000007688) ATP8B1 (ENSMICG00000003084) NARS1 (ENSMICG00000003077) FECH (ENSMICG00000003069) ONECUT2 (ENSMICG00000003067) ST8SIA3 (ENSMICG00000003063) WDR7 (ENSMICG00000017318) TXNL1 (ENSMICG00000034326) ENSMICG00000026597 TCF4 (ENSMICG00000012305) #22 CCDC68 (ENSMICG00000015449) #23 RAB27B (ENSMICG00000015440) #24 DYNAP (ENSMICG00000015413) ENSMICG00000046521 C18orf54 (ENSMICG00000029715) #26 STARD6 (ENSMICG00000012563) #27 POLI (ENSMICG00000008976) #28 MBD2 (ENSMICG00000008970) #29 DCC (ENSMICG00000003408) MEX3C (ENSMICG00000005815) SMAD4 (ENSMICG00000017525) ELAC1 (ENSMICG00000017524) ENSMICG00000017523 ENSMICG00000045071 MRO (ENSMICG00000008008) Lemuriformes_a ANCESTRAL SPECIES 62 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654.e Greater bamboo lemur MODERN SPECIES 565 RAX (ENSPSMG00000023601) GRP (ENSPSMG00000023605) SEC11C (ENSPSMG00000023622) ENSPSMG00000023628 ZNF532 (ENSPSMG00000023642) MALT1 (ENSPSMG00000023678) ALPK2 (ENSPSMG00000023693) NEDD4L (ENSPSMG00000023833) ATP8B1 (ENSPSMG00000023934) NARS1 (ENSPSMG00000023971) FECH (ENSPSMG00000023987) ONECUT2 (ENSPSMG00000023994) ST8SIA3 (ENSPSMG00000023998) WDR7 (ENSPSMG00000024066) TXNL1 (ENSPSMG00000024109) TCF4 (ENSPSMG00000024612) #22 CCDC68 (ENSPSMG00000024788) #23 RAB27B (ENSPSMG00000024792) #24 C18orf54 (ENSPSMG00000024803) #26 STARD6 (ENSPSMG00000024808) #27 POLI (ENSPSMG00000024832) #28 MBD2 (ENSPSMG00000024840) #29 Coquerels sifaka MODERN SPECIES 512 GRP (ENSPCOG00000002624) SEC11C (ENSPCOG00000026166) ZNF532 (ENSPCOG00000016129) MALT1 (ENSPCOG00000028272) ALPK2 (ENSPCOG00000025311) NEDD4L (ENSPCOG00000024823) ENSPCOG00000007600 ATP8B1 (ENSPCOG00000028677) NARS1 (ENSPCOG00000020832) FECH (ENSPCOG00000017751) ONECUT2 (ENSPCOG00000022214) ST8SIA3 (ENSPCOG00000016338) WDR7 (ENSPCOG00000024980) TXNL1 (ENSPCOG00000014144) ENSPCOG00000015466 TCF4 (ENSPCOG00000019229) #22 CCDC68 (ENSPCOG00000014000) #23 RAB27B (ENSPCOG00000011474) #24 DYNAP (ENSPCOG00000026854) C18orf54 (ENSPCOG00000020877) #26 STARD6 (ENSPCOG00000014244) #27 POLI (ENSPCOG00000022543) #28 MBD2 (ENSPCOG00000013359) #29 ENSPCOG00000026622 MEX3C (ENSPCOG00000027054) SMAD4 (ENSPCOG00000024716) ELAC1 (ENSPCOG00000026213) ME2 (ENSPCOG00000021599) MRO (ENSPCOG00000027267) MAPK4 (ENSPCOG00000023971) ENSPCOG00000014158 Bushbaby MODERN SPECIES 142 RAX (ENSOGAG00000002572) GRP (ENSOGAG00000006747) SEC11C (ENSOGAG00000002570) ENSOGAG00000030701 ZNF532 (ENSOGAG00000016596) MALT1 (ENSOGAG00000015629) ALPK2 (ENSOGAG00000015625) NEDD4L (ENSOGAG00000015613) ATP8B1 (ENSOGAG00000016309) NARS1 (ENSOGAG00000016302) FECH (ENSOGAG00000001511) ONECUT2 (ENSOGAG00000031961) ST8SIA3 (ENSOGAG00000003390) WDR7 (ENSOGAG00000003382) TXNL1 (ENSOGAG00000007641) TCF4 (ENSOGAG00000005735) #22 CCDC68 (ENSOGAG00000005732) #23 RAB27B (ENSOGAG00000005728) #24 ENSOGAG00000034295 DYNAP (ENSOGAG00000011686) C18orf54 (ENSOGAG00000008032) #26 STARD6 (ENSOGAG00000025351) #27 POLI (ENSOGAG00000008030) #28 MBD2 (ENSOGAG00000008028) #29 ENSOGAG00000028862 Laurasiatheria ANCESTRAL SPECIES 23 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000159129 #22 Hedgehog MODERN SPECIES 8116 TCF4 (ENSEEUG00000000134) #22 Common shrew MODERN SPECIES 6392 TCF4 (ENSSARG00000001666) #22 Laurasiatheria_a ANCESTRAL SPECIES 13 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Laurasiatheria_b ANCESTRAL SPECIES 13 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Laurasiatheria_c ANCESTRAL SPECIES 24 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Chiroptera ANCESTRAL SPECIES 26 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Megabat MODERN SPECIES 3032 TCF4 (ENSPVAG00000002074) #22 Microchiroptera ANCESTRAL SPECIES 26 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Microbat MODERN SPECIES 973 CPLX4 (ENSMLUG00000005818) GRP (ENSMLUG00000005811) ENSMLUG00000005808 ENSMLUG00000027321 ZNF532 (ENSMLUG00000000137) MALT1 (ENSMLUG00000009423) ALPK2 (ENSMLUG00000004977) NEDD4L (ENSMLUG00000004954) ATP8B1 (ENSMLUG00000004303) NARS1 (ENSMLUG00000004325) FECH (ENSMLUG00000005066) ONECUT2 (ENSMLUG00000005062) ST8SIA3 (ENSMLUG00000005059) WDR7 (ENSMLUG00000017226) TXNL1 (ENSMLUG00000017225) TCF4 (ENSMLUG00000012927) #22 CCDC68 (ENSMLUG00000013314) #23 RAB27B (ENSMLUG00000013310) #24 ENSMLUG00000025489 #25 DYNAP (ENSMLUG00000027783) Greater horseshoe bat MODERN SPECIES 10 ENSRFEG00010011941 GRP (ENSRFEG00010011906) SEC11C (ENSRFEG00010011824) ENSRFEG00010011608 ZNF532 (ENSRFEG00010011551) MALT1 (ENSRFEG00010010969) ALPK2 (ENSRFEG00010010738) NEDD4L (ENSRFEG00010020297) ATP8B1 (ENSRFEG00010020234) NARS1 (ENSRFEG00010020203) FECH (ENSRFEG00010020141) ONECUT2 (ENSRFEG00010020129) ST8SIA3 (ENSRFEG00010020110) WDR7 (ENSRFEG00010019915) TXNL1 (ENSRFEG00010019852) TCF4 (ENSRFEG00010018296) #22 CCDC68 (ENSRFEG00010018112) #23 RAB27B (ENSRFEG00010018080) #24 C18orf54 (ENSRFEG00010017994) #26 STARD6 (ENSRFEG00010017932) #27 POLI (ENSRFEG00010017875) #28 MBD2 (ENSRFEG00010017760) #29 DCC (ENSRFEG00010016811) MEX3C (ENSRFEG00010016751) SMAD4 (ENSRFEG00010016623) ELAC1 (ENSRFEG00010016582) ME2 (ENSRFEG00010016375) MRO (ENSRFEG00010016266) MAPK4 (ENSRFEG00010016193) SKA1 (ENSRFEG00010015982) CXXC1 (ENSRFEG00010015320) Equus ANCESTRAL SPECIES 36 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT01090000263349 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Horse MODERN SPECIES 29 SEC11C (ENSECAG00000017024) OACYL (ENSECAG00000016124) ZNF532 (ENSECAG00000014565) MALT1 (ENSECAG00000013691) ALPK2 (ENSECAG00000012921) ENSECAG00000045822 NEDD4L (ENSECAG00000000751) ATP8B1 (ENSECAG00000021015) ENSECAG00000060136 NARS1 (ENSECAG00000017066) FECH (ENSECAG00000012137) ONECUT2 (ENSECAG00000011345) ST8SIA3 (ENSECAG00000011119) WDR7 (ENSECAG00000007050) TXNL1 (ENSECAG00000021822) TCF4 (ENSECAG00000017265) #22 CCDC68 (ENSECAG00000015950) #23 RAB27B (ENSECAG00000013138) #24 ENSECAG00000037347 #25 DYNAP (ENSECAG00000039178) ENSECAG00000048982 C8H18orf54 (ENSECAG00000043788) #26 STARD6 (ENSECAG00000011476) #27 POLI (ENSECAG00000004436) #28 MBD2 (ENSECAG00000022368) #29 DCC (ENSECAG00000021760) ENSECAG00000055237 MEX3C (ENSECAG00000021727) SMAD4 (ENSECAG00000017857) ELAC1 (ENSECAG00000016230) ME2 (ENSECAG00000005517) Donkey MODERN SPECIES 27 GRP (ENSEASG00005037849) SEC11C (ENSEASG00005002703) ENSEASG00005002705 ZNF532 (ENSEASG00005002708) MALT1 (ENSEASG00005002711) ALPK2 (ENSEASG00005002721) NEDD4L (ENSEASG00005002732) ATP8B1 (ENSEASG00005002808) NARS1 (ENSEASG00005003393) FECH (ENSEASG00005003401) ONECUT2 (ENSEASG00005027472) ST8SIA3 (ENSEASG00005003406) WDR7 (ENSEASG00005003421) TXNL1 (ENSEASG00005003437) ENSEASG00005037138 TCF4 (ENSEASG00005003461) #22 CCDC68 (ENSEASG00005003465) #23 RAB27B (ENSEASG00005003468) #24 ENSEASG00005003475 C18orf54 (ENSEASG00005003480) #26 STARD6 (ENSEASG00005033368) #27 POLI (ENSEASG00005003488) #28 ENSEASG00005003504 #29 DCC (ENSEASG00005003571) MEX3C (ENSEASG00005032865) SMAD4 (ENSEASG00005003805) ELAC1 (ENSEASG00005003810) ME2 (ENSEASG00005003813) MRO (ENSEASG00005003818) MAPK4 (ENSEASG00005003821) SKA1 (ENSEASG00005033486) Carnivora ANCESTRAL SPECIES 13 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Caniformia ANCESTRAL SPECIES 9 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Canidae ANCESTRAL SPECIES 58 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT01030000234510.a.a.b Red fox MODERN SPECIES 25 SEC11C (ENSVVUG00000015956) ENSVVUG00000015926 ZNF532 (ENSVVUG00000015898) MALT1 (ENSVVUG00000015734) ALPK2 (ENSVVUG00000015696) NEDD4L (ENSVVUG00000015651) ENSVVUG00000015631 ATP8B1 (ENSVVUG00000015617) NARS (ENSVVUG00000014959) FECH (ENSVVUG00000014934) ONECUT2 (ENSVVUG00000014932) ST8SIA3 (ENSVVUG00000014931) ENSVVUG00000014923 WDR7 (ENSVVUG00000014912) TXNL1 (ENSVVUG00000014906) TCF4 (ENSVVUG00000014890) #22 CCDC68 (ENSVVUG00000014885) #23 RAB27B (ENSVVUG00000014878) #24 ENSVVUG00000014874 #25 ENSVVUG00000014866 CUNH18orf54 (ENSVVUG00000014859) CUNH18orf54 (ENSVVUG00000014854) #26 STARD6 (ENSVVUG00000014848) #27 POLI (ENSVVUG00000014845) #28 MBD2 (ENSVVUG00000014700) #29 ENSVVUG00000014674 DCC (ENSVVUG00000014667) ENSVVUG00000014654 MEX3C (ENSVVUG00000014636) SMAD4 (ENSVVUG00000014609) ELAC1 (ENSVVUG00000014595) Canis_lupus ANCESTRAL SPECIES ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT01100000263504.a.b.a.b.a.b.ib ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000153112.D.h.b ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT01030000234510.a.a.b Dog MODERN SPECIES GRP (ENSCAFG00845000570) SEC11C (ENSCAFG00845000586) OACYL (ENSCAFG00845000613) ZNF532 (ENSCAFG00845000673) MALT1 (ENSCAFG00845000742) ALPK2 (ENSCAFG00845000830) NEDD4L (ENSCAFG00845001211) ATP8B1 (ENSCAFG00845001746) NARS1 (ENSCAFG00845001801) FECH (ENSCAFG00845001850) ONECUT2 (ENSCAFG00845001888) ST8SIA3 (ENSCAFG00845001921) WDR7 (ENSCAFG00845002062) ENSCAFG00845002237 TXNL1 (ENSCAFG00845002269) TCF4 (ENSCAFG00845002403) #22 CCDC68 (ENSCAFG00845002566) #23 RAB27B (ENSCAFG00845002581) #24 ENSCAFG00845002605 #25 CUPIN1 (ENSCAFG00845002731) #26 STARD6 (ENSCAFG00845002868) #27 POLI (ENSCAFG00845002887) #28 MBD2 (ENSCAFG00845002942) #29 ENSCAFG00845002966 DCC (ENSCAFG00845003053) ENSCAFG00845003189 MEX3C (ENSCAFG00845003206) SMAD4 (ENSCAFG00845003229) SMAD4 (ENSCAFG00845003249) ME2 (ENSCAFG00845003293) MRO (ENSCAFG00845003352) Dingo DUPLICATION Dingo MODERN SPECIES 125 SEC11C (ENSCAFG00020020098) ENSCAFG00020020107 ZNF532 (ENSCAFG00020020115) MALT1 (ENSCAFG00020020119) ALPK2 (ENSCAFG00020020128) NEDD4L (ENSCAFG00020020172) ATP8B1 (ENSCAFG00020020470) NARS1 (ENSCAFG00020021055) FECH (ENSCAFG00020021062) ONECUT2 (ENSCAFG00020021090) ST8SIA3 (ENSCAFG00020021095) WDR7 (ENSCAFG00020021129) ENSCAFG00020021173 TXNL1 (ENSCAFG00020021181) ENSCAFG00020021197 #22 ENSCAFG00020021285 #22 CCDC68 (ENSCAFG00020021589) #23 RAB27B (ENSCAFG00020021594) #24 ENSCAFG00020021601 ENSCAFG00020021603 C18orf54 (ENSCAFG00020021611) #26 STARD6 (ENSCAFG00020021613) #27 ENSCAFG00020021615 POLI (ENSCAFG00020021618) #28 MBD2 (ENSCAFG00020021622) #29 DCC (ENSCAFG00020021641) ENSCAFG00020021658 MEX3C (ENSCAFG00020021673) SMAD4 (ENSCAFG00020021674) ELAC1 (ENSCAFG00020021678) ME2 (ENSCAFG00020021686) Dingo MODERN SPECIES 125 GRP (ENSCAFG00020020093) SEC11C (ENSCAFG00020020098) ENSCAFG00020020107 ZNF532 (ENSCAFG00020020115) MALT1 (ENSCAFG00020020119) ALPK2 (ENSCAFG00020020128) NEDD4L (ENSCAFG00020020172) ATP8B1 (ENSCAFG00020020470) NARS1 (ENSCAFG00020021055) FECH (ENSCAFG00020021062) ONECUT2 (ENSCAFG00020021090) ST8SIA3 (ENSCAFG00020021095) WDR7 (ENSCAFG00020021129) ENSCAFG00020021173 TXNL1 (ENSCAFG00020021181) ENSCAFG00020021197 #22 ENSCAFG00020021285 #22 CCDC68 (ENSCAFG00020021589) #23 RAB27B (ENSCAFG00020021594) #24 ENSCAFG00020021601 ENSCAFG00020021603 C18orf54 (ENSCAFG00020021611) #26 STARD6 (ENSCAFG00020021613) #27 ENSCAFG00020021615 POLI (ENSCAFG00020021618) #28 MBD2 (ENSCAFG00020021622) #29 DCC (ENSCAFG00020021641) ENSCAFG00020021658 MEX3C (ENSCAFG00020021673) SMAD4 (ENSCAFG00020021674) ELAC1 (ENSCAFG00020021678) Caniformia_b ANCESTRAL SPECIES 25 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Mustelinae ANCESTRAL SPECIES 5 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 American mink MODERN SPECIES 5 ENSNVIG00000016199 GRP (ENSNVIG00000016216) SEC11C (ENSNVIG00000016230) ENSNVIG00000016255 ZNF532 (ENSNVIG00000016267) MALT1 (ENSNVIG00000016308) ALPK2 (ENSNVIG00000016394) NEDD4L (ENSNVIG00000016446) ATP8B1 (ENSNVIG00000016769) NARS1 (ENSNVIG00000016848) FECH (ENSNVIG00000016865) ONECUT2 (ENSNVIG00000016896) ST8SIA3 (ENSNVIG00000016915) WDR7 (ENSNVIG00000016923) TXNL1 (ENSNVIG00000017117) TCF4 (ENSNVIG00000017179) #22 CCD68 (ENSNVIG00000018661) #23 RAB27B (ENSNVIG00000018715) #24 Ferret MODERN SPECIES 177 ENSMPUG00000016478 ZNF532 (ENSMPUG00000016477) ENSMPUG00000016476 MALT1 (ENSMPUG00000016475) ALPK2 (ENSMPUG00000016474) NEDD4L (ENSMPUG00000016473) ATP8B1 (ENSMPUG00000016472) ENSMPUG00000016471 NARS1 (ENSMPUG00000016470) FECH (ENSMPUG00000016469) ONECUT2 (ENSMPUG00000016468) ST8SIA3 (ENSMPUG00000016467) ENSMPUG00000016466 WDR7 (ENSMPUG00000016465) TXNL1 (ENSMPUG00000016461) TCF4 (ENSMPUG00000016460) #22 CCDC68 (ENSMPUG00000016459) #23 RAB27B (ENSMPUG00000016458) #24 ENSMPUG00000016457 #25 ENSMPUG00000016456 ENSMPUG00000016455 C18orf54 (ENSMPUG00000016454) #26 Ursidae ANCESTRAL SPECIES 23 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437.jc ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301.w.b ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Giant Panda MODERN SPECIES 5 ENSAMEG00000006625 GRP (ENSAMEG00000015271) SEC11C (ENSAMEG00000015255) ENSAMEG00000015250 ZNF532 (ENSAMEG00000015220) MALT1 (ENSAMEG00000031470) ALPK2 (ENSAMEG00000015212) NEDD4L (ENSAMEG00000015135) ATP8B1 (ENSAMEG00000014846) NARS1 (ENSAMEG00000014819) FECH (ENSAMEG00000014813) ONECUT2 (ENSAMEG00000025402) ST8SIA3 (ENSAMEG00000014804) WDR7 (ENSAMEG00000014743) TXNL1 (ENSAMEG00000014729) TCF4 (ENSAMEG00000017162) #22 CCDC68 (ENSAMEG00000017171) #23 RAB27B (ENSAMEG00000017177) #24 ENSAMEG00000031006 #25 ENSAMEG00000031262 ENSAMEG00000003344 C18orf54 (ENSAMEG00000017187) #26 STARD6 (ENSAMEG00000017188) #27 POLI (ENSAMEG00000017194) #28 MBD2 (ENSAMEG00000017208) #29 DCC (ENSAMEG00000017215) ENSAMEG00000002879 MEX3C (ENSAMEG00000002897) SMAD4 (ENSAMEG00000002899) ELAC1 (ENSAMEG00000002931) ME2 (ENSAMEG00000002933) Ursus ANCESTRAL SPECIES 25 ENSGT00940000155301.w.b ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 American black bear DUPLICATION American black bear MODERN SPECIES 2912 TCF4 (ENSUAMG00000022132) #22 American black bear MODERN SPECIES 1762 ENSUAMG00000011242 ENSUAMG00000011240 #22 Polar bear DUPLICATION Polar bear MODERN SPECIES 96 WDR7 (ENSUMAG00000003707) TXNL1 (ENSUMAG00000003547) ENSUMAG00000003543 ENSUMAG00000003531 #22 TCF4 (ENSUMAG00000003526) #22 CCDC68 (ENSUMAG00000003505) #23 RAB27B (ENSUMAG00000003499) #24 ENSUMAG00000003482 #25 C18orf54 (ENSUMAG00000003457) #26 STARD6 (ENSUMAG00000003451) #27 POLI (ENSUMAG00000003446) #28 MBD2 (ENSUMAG00000003257) #29 DCC (ENSUMAG00000003174) ENSUMAG00000003148 MEX3C (ENSUMAG00000003137) SMAD4 (ENSUMAG00000003120) ELAC1 (ENSUMAG00000003132) ME2 (ENSUMAG00000003096) MRO (ENSUMAG00000003055) MAPK4 (ENSUMAG00000003042) Polar bear MODERN SPECIES 96 WDR7 (ENSUMAG00000003707) TXNL1 (ENSUMAG00000003547) ENSUMAG00000003543 ENSUMAG00000003531 #22 TCF4 (ENSUMAG00000003526) #22 CCDC68 (ENSUMAG00000003505) #23 RAB27B (ENSUMAG00000003499) #24 ENSUMAG00000003482 #25 C18orf54 (ENSUMAG00000003457) #26 STARD6 (ENSUMAG00000003451) #27 POLI (ENSUMAG00000003446) #28 MBD2 (ENSUMAG00000003257) #29 DCC (ENSUMAG00000003174) ENSUMAG00000003148 MEX3C (ENSUMAG00000003137) SMAD4 (ENSUMAG00000003120) ELAC1 (ENSUMAG00000003132) ME2 (ENSUMAG00000003096) MRO (ENSUMAG00000003055) Felidae ANCESTRAL SPECIES 24 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT01090000260040.a.a.a ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Panthera ANCESTRAL SPECIES 24 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT01090000260040.a.a.a ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Panthera_a ANCESTRAL SPECIES 26 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 lion MODERN SPECIES 12 RAX (ENSPLOG00000008159) GRP (ENSPLOG00000008190) SEC11C (ENSPLOG00000008277) ENSPLOG00000008373 ZNF532 (ENSPLOG00000008455) MALT1 (ENSPLOG00000008545) ENSPLOG00000008759 ALPK2 (ENSPLOG00000008805) NEDD4L (ENSPLOG00000009056) ATP8B1 (ENSPLOG00000009656) NARS1 (ENSPLOG00000009844) ONECUT2 (ENSPLOG00000010100) ST8SIA3 (ENSPLOG00000010116) WDR7 (ENSPLOG00000010168) TXNL1 (ENSPLOG00000010244) TCF4 (ENSPLOG00000010490) #22 CCDC68 (ENSPLOG00000011056) #23 RAB27B (ENSPLOG00000011162) #24 DYNAP (ENSPLOG00000011216) C18orf54 (ENSPLOG00000011291) #26 STARD6 (ENSPLOG00000011360) #27 POLI (ENSPLOG00000011432) #28 MBD2 (ENSPLOG00000011506) #29 DCC (ENSPLOG00000011680) ENSPLOG00000012308 ENSPLOG00000012345 MEX3C (ENSPLOG00000012379) SMAD4 (ENSPLOG00000012428) ELAC1 (ENSPLOG00000012525) ME2 (ENSPLOG00000012643) MRO (ENSPLOG00000012819) leopard MODERN SPECIES 43 SEC11C (ENSPPRG00000009244) ENSPPRG00000007882 ZNF532 (ENSPPRG00000007290) MALT1 (ENSPPRG00000005471) ALPK2 (ENSPPRG00000003768) NEDD4L (ENSPPRG00000003178) ENSPPRG00000019716 ATP8B1 (ENSPPRG00000019108) NARS1 (ENSPPRG00000015312) FECH (ENSPPRG00000014934) ONECUT2 (ENSPPRG00000013061) ST8SIA3 (ENSPPRG00000012927) WDR7 (ENSPPRG00000011801) TXNL1 (ENSPPRG00000007810) ENSPPRG00000017776 TCF4 (ENSPPRG00000006150) #22 CCDC68 (ENSPPRG00000005242) #23 RAB27B (ENSPPRG00000004858) #24 C18orf54 (ENSPPRG00000004732) #26 STARD6 (ENSPPRG00000004011) #27 POLI (ENSPPRG00000003673) #28 MBD2 (ENSPPRG00000001698) #29 DCC (ENSPPRG00000000462) ENSPPRG00000015809 ENSPPRG00000013111 MEX3C (ENSPPRG00000012151) SMAD4 (ENSPPRG00000010397) ELAC1 (ENSPPRG00000009439) ME2 (ENSPPRG00000008913) MRO (ENSPPRG00000004466) MAPK4 (ENSPPRG00000003118) Tiger MODERN SPECIES 143 CPLX4 (ENSPTIG00000011458) ENSPTIG00000011835 SEC11C (ENSPTIG00000012346) ENSPTIG00000014327 ZNF532 (ENSPTIG00000016323) MALT1 (ENSPTIG00000017119) ALPK2 (ENSPTIG00000019056) NEDD4L (ENSPTIG00000007076) ATP8B1 (ENSPTIG00000021846) NARS1 (ENSPTIG00000006800) FECH (ENSPTIG00000007430) ST8SIA3 (ENSPTIG00000010085) WDR7 (ENSPTIG00000010990) TXNL1 (ENSPTIG00000017663) ENSPTIG00000001536 TCF4 (ENSPTIG00000019887) #22 CCDC68 (ENSPTIG00000004987) #23 RAB27B (ENSPTIG00000006492) #24 C18orf54 (ENSPTIG00000007461) #26 STARD6 (ENSPTIG00000008640) #27 POLI (ENSPTIG00000009520) #28 MBD2 (ENSPTIG00000011491) #29 DCC (ENSPTIG00000013104) ENSPTIG00000021315 MEX3C (ENSPTIG00000004865) SMAD4 (ENSPTIG00000005616) ELAC1 (ENSPTIG00000006619) ME2 (ENSPTIG00000007762) MRO (ENSPTIG00000013632) ENSPTIG00000015504 SKA1 (ENSPTIG00000015731) Cat MODERN SPECIES 243 CCBE1 (ENSFCAG00000041810) LMAN1 (ENSFCAG00000030102) RAX (ENSFCAG00000006503) ENSFCAG00000044914 OACYL (ENSFCAG00000024225) ZNF532 (ENSFCAG00000013988) MALT1 (ENSFCAG00000013987) ALPK2 (ENSFCAG00000002283) NEDD4L (ENSFCAG00000014898) ATP8B1 (ENSFCAG00000014301) NARS1 (ENSFCAG00000010822) ONECUT2 (ENSFCAG00000010819) ST8SIA3 (ENSFCAG00000041173) WDR7 (ENSFCAG00000011414) TXNL1 (ENSFCAG00000022537) TCF4 (ENSFCAG00000014682) #22 CCDC68 (ENSFCAG00000012086) #23 RAB27B (ENSFCAG00000022264) #24 ENSFCAG00000050208 #25 ENSFCAG00000048015 CD3H18orf54 (ENSFCAG00000009985) #26 STARD6 (ENSFCAG00000028138) #27 POLI (ENSFCAG00000039381) #28 MBD2 (ENSFCAG00000022047) #29 DCC (ENSFCAG00000012953) ENSFCAG00000022420 MEX3C (ENSFCAG00000027546) SMAD4 (ENSFCAG00000005257) ELAC1 (ENSFCAG00000039876) ME2 (ENSFCAG00000005659) MRO (ENSFCAG00000030720) Artiodactyla ANCESTRAL SPECIES 17 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Suina ANCESTRAL SPECIES 12 ENSGT00390000005300 ENSGT00390000008748.b ENSGT00940000157725 ENSGT00940000158086 ENSGT00530000063561 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 ENSGT00390000017828 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Pig MODERN SPECIES OAZ2 (ENSSSCG00000004550) RBPMS2 (ENSSSCG00000004549) PIF1 (ENSSSCG00000004548) PLEKHO2 (ENSSSCG00000004547) ENSSSCG00000037998 ANKDD1A (ENSSSCG00000004545) SPG21 (ENSSSCG00000004544) MTFMT (ENSSSCG00000004543) NARS1 (ENSSSCG00000004542) ENSSSCG00000033063 FECH (ENSSSCG00000004541) ONECUT2 (ENSSSCG00000004540) ST8SIA3 (ENSSSCG00000038971) WDR7 (ENSSSCG00000004538) TXNL1 (ENSSSCG00000004537) TCF4 (ENSSSCG00000004535) #22 CCDC68 (ENSSSCG00000004534) #23 RAB27B (ENSSSCG00000035243) #24 DYNAP (ENSSSCG00000042812) ENSSSCG00000038606 C18orf54 (ENSSSCG00000004531) #26 STARD6 (ENSSSCG00000004530) #27 POLI (ENSSSCG00000004529) #28 MBD2 (ENSSSCG00000004528) #29 ENSSSCG00000043320 DCC (ENSSSCG00000040836) ENSSSCG00000047971 MEX3C (ENSSSCG00000034427) SMAD4 (ENSSSCG00000004524) ELAC1 (ENSSSCG00000024479) ME2 (ENSSSCG00000004522) Chacoan peccary MODERN SPECIES 192 TRIP4 (ENSCWAG00000002078) ZNF609 (ENSCWAG00000002093) OAZ2 (ENSCWAG00000002125) ENSCWAG00000002157 PIF1 (ENSCWAG00000002168) PLEKHO2 (ENSCWAG00000002191) ANKDD1A (ENSCWAG00000002251) SPG21 (ENSCWAG00000002477) MTFMT (ENSCWAG00000002528) NARS1 (ENSCWAG00000002547) FECH (ENSCWAG00000002562) ONECUT2 (ENSCWAG00000002566) ST8SIA3 (ENSCWAG00000002575) WDR7 (ENSCWAG00000002598) TXNL1 (ENSCWAG00000002632) TCF4 (ENSCWAG00000002670) #22 CCDC68 (ENSCWAG00000002893) #23 RAB27B (ENSCWAG00000002919) #24 Artiodactyla_a ANCESTRAL SPECIES 17 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Artiodactyla_b ANCESTRAL SPECIES 10 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Cetacea ANCESTRAL SPECIES 11 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000166688.b ENSGT00960000190376.b ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Odontoceti ANCESTRAL SPECIES 10 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000166688.b ENSGT00960000190376.b ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Odontoceti_a ANCESTRAL SPECIES 9 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000166688.b ENSGT00960000190376.b ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Odontoceti_b ANCESTRAL SPECIES 10 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000166688.b ENSGT00960000190376.b ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Monodontidae ANCESTRAL SPECIES 8 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT01100000263514.B.l ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000166688.b ENSGT00960000190376.b ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Narwhal MODERN SPECIES 295 ENSMMNG00015005212 SEC11C (ENSMMNG00015005226) ZNF532 (ENSMMNG00015005250) MALT1 (ENSMMNG00015005277) ENSMMNG00015005332 ALPK2 (ENSMMNG00015005354) NEDD4L (ENSMMNG00015005476) ATP8B1 (ENSMMNG00015005801) NARS1 (ENSMMNG00015005856) FECH (ENSMMNG00015005882) ONECUT2 (ENSMMNG00015005900) ST8SIA3 (ENSMMNG00015005958) WDR7 (ENSMMNG00015005999) TXNL1 (ENSMMNG00015006084) ENSMMNG00015006103 TCF4 (ENSMMNG00015006368) #22 CCDC68 (ENSMMNG00015007197) #23 RAB27B (ENSMMNG00015007238) #24 C18orf54 (ENSMMNG00015007290) #26 STARD6 (ENSMMNG00015007313) #27 POLI (ENSMMNG00015007331) #28 MBD2 (ENSMMNG00015007380) #29 ENSMMNG00015000016 DCC (ENSMMNG00015000224) ENSMMNG00015000421 ENSMMNG00015000436 MEX3C (ENSMMNG00015000471) SMAD4 (ENSMMNG00015000527) ELAC1 (ENSMMNG00015000560) ME2 (ENSMMNG00015000602) MRO (ENSMMNG00015000680) Beluga whale MODERN SPECIES 25 GRP (ENSDLEG00000003843) SEC11C (ENSDLEG00000003860) ZNF532 (ENSDLEG00000003888) MALT1 (ENSDLEG00000003899) ENSDLEG00000003920 ALPK2 (ENSDLEG00000003924) NEDD4L (ENSDLEG00000003953) ATP8B1 (ENSDLEG00000003992) NARS (ENSDLEG00000004016) FECH (ENSDLEG00000004026) ONECUT2 (ENSDLEG00000004035) ST8SIA3 (ENSDLEG00000004038) WDR7 (ENSDLEG00000004055) TXNL1 (ENSDLEG00000004132) ENSDLEG00000004143 TCF4 (ENSDLEG00000004150) #22 CCDC68 (ENSDLEG00000004169) #23 RAB27B (ENSDLEG00000004179) #24 DYNAP (ENSDLEG00000004184) CUNH18orf54 (ENSDLEG00000004187) #26 STARD6 (ENSDLEG00000004192) #27 POLI (ENSDLEG00000004201) #28 MBD2 (ENSDLEG00000004210) #29 DCC (ENSDLEG00000004245) ENSDLEG00000004386 MEX3C (ENSDLEG00000004392) SMAD4 (ENSDLEG00000004395) ELAC1 (ENSDLEG00000004401) ME2 (ENSDLEG00000004409) MRO (ENSDLEG00000004425) MAPK4 (ENSDLEG00000004428) Vaquita MODERN SPECIES 5 LMAN1 (ENSPSNG00000020472) CPLX4 (ENSPSNG00000020549) RAX (ENSPSNG00000020592) GRP (ENSPSNG00000020621) SEC11C (ENSPSNG00000020707) ZNF532 (ENSPSNG00000020766) MALT1 (ENSPSNG00000020856) NEDD4L (ENSPSNG00000021237) ATP8B1 (ENSPSNG00000021625) NARS1 (ENSPSNG00000004542) FECH (ENSPSNG00000004601) ONECUT2 (ENSPSNG00000004637) ST8SIA3 (ENSPSNG00000004660) WDR7 (ENSPSNG00000004704) TXNL1 (ENSPSNG00000004744) TCF4 (ENSPSNG00000005296) #22 ENSPSNG00000006776 ENSPSNG00000006882 CCDC68 (ENSPSNG00000006910) #23 RAB27B (ENSPSNG00000006964) #24 C18orf54 (ENSPSNG00000007061) #26 STARD6 (ENSPSNG00000007129) #27 POLI (ENSPSNG00000007184) #28 MBD2 (ENSPSNG00000007268) #29 DCC (ENSPSNG00000007423) ENSPSNG00000007925 ENSPSNG00000007942 ENSPSNG00000007972 MEX3C (ENSPSNG00000007985) SMAD4 (ENSPSNG00000008007) ELAC1 (ENSPSNG00000008066) Dolphin MODERN SPECIES 2549 TCF4 (ENSTTRG00000011542) #22 Sperm whale MODERN SPECIES 10 RAX (ENSPCTG00005007481) GRP (ENSPCTG00005007446) SEC11C (ENSPCTG00005007419) ENSPCTG00005007364 MALT1 (ENSPCTG00005007179) NEDD4L (ENSPCTG00005006315) ENSPCTG00005006201 ATP8B1 (ENSPCTG00005006095) NARS1 (ENSPCTG00005005993) FECH (ENSPCTG00005005911) ONECUT2 (ENSPCTG00005005889) ST8SIA3 (ENSPCTG00005005861) WDR7 (ENSPCTG00005005758) TXNL1 (ENSPCTG00005005651) ENSPCTG00005005635 TCF4 (ENSPCTG00005004622) #22 CCDC68 (ENSPCTG00005004429) #23 RAB27B (ENSPCTG00005004412) #24 ENSPCTG00005004391 C19H18orf54 (ENSPCTG00005004368) #26 STARD6 (ENSPCTG00005015396) #27 POLI (ENSPCTG00005015301) #28 MBD2 (ENSPCTG00005015131) #29 DCC (ENSPCTG00005014061) ENSPCTG00005014007 ENSPCTG00005013989 ENSPCTG00005013928 ENSPCTG00005013881 MEX3C (ENSPCTG00005013828) SMAD4 (ENSPCTG00005013716) ELAC1 (ENSPCTG00005013645) Blue whale MODERN SPECIES 5 CPLX4 (ENSBMSG00010012103) RAX (ENSBMSG00010012086) GRP (ENSBMSG00010012076) SEC11C (ENSBMSG00010012060) ENSBMSG00010012043 ZNF532 (ENSBMSG00010012027) MALT1 (ENSBMSG00010012011) NEDD4L (ENSBMSG00010011414) ATP8B1 (ENSBMSG00010011152) NARS1 (ENSBMSG00010011098) FECH (ENSBMSG00010011071) ST8SIA3 (ENSBMSG00010011033) WDR7 (ENSBMSG00010011015) TXNL1 (ENSBMSG00010010991) ENSBMSG00010010977 TCF4 (ENSBMSG00010010256) #22 CCDC68 (ENSBMSG00010010114) #23 RAB27B (ENSBMSG00010010092) #24 ENSBMSG00010010086 C18orf54 (ENSBMSG00010010073) #26 STARD6 (ENSBMSG00010010059) #27 POLI (ENSBMSG00010010045) #28 MBD2 (ENSBMSG00010010022) #29 ENSBMSG00010010006 DCC (ENSBMSG00010009938) ENSBMSG00010009902 MEX3C (ENSBMSG00010009893) SMAD4 (ENSBMSG00010009874) ELAC1 (ENSBMSG00010009858) ME2 (ENSBMSG00010009846) MRO (ENSBMSG00010009824) Pecora ANCESTRAL SPECIES 26 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Percora_a ANCESTRAL SPECIES 28 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Bovidae ANCESTRAL SPECIES 28 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Caprinae ANCESTRAL SPECIES 25 ENSGT00390000015600.c.b.i ENSGT01030000234515.a.a.a.d ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642.b ENSGT00940000159850 Goat MODERN SPECIES 16 ENSCHIG00000006738 ENSCHIG00000019933 ENSCHIG00000014814 ZNF532 (ENSCHIG00000009576) MALT1 (ENSCHIG00000016706) ALPK2 (ENSCHIG00000024434) NEDD4L (ENSCHIG00000007155) ATP8B1 (ENSCHIG00000012416) NARS1 (ENSCHIG00000019297) FECH (ENSCHIG00000015939) ONECUT2 (ENSCHIG00000012085) ST8SIA3 (ENSCHIG00000020763) WDR7 (ENSCHIG00000002769) TXNL1 (ENSCHIG00000021510) ENSCHIG00000012821 TCF4 (ENSCHIG00000019406) #22 CCDC68 (ENSCHIG00000011317) #23 RAB27B (ENSCHIG00000016115) #24 ENSCHIG00000009672 #25 ENSCHIG00000015134 C18orf54 (ENSCHIG00000022200) #26 STARD6 (ENSCHIG00000015688) #27 POLI (ENSCHIG00000020002) #28 MBD2 (ENSCHIG00000011602) #29 ENSCHIG00000019871 DCC (ENSCHIG00000025162) MEX3C (ENSCHIG00000017962) SMAD4 (ENSCHIG00000019181) ELAC1 (ENSCHIG00000014278) ME2 (ENSCHIG00000001144) ENSCHIG00000016460 Rambouillet Sheep MODERN SPECIES 15 SEC11C (ENSOARG00020024983) ENSOARG00020024948 ZNF532 (ENSOARG00020024903) MALT1 (ENSOARG00020024815) ALPK2 (ENSOARG00020024773) NEDD4L (ENSOARG00020024094) ATP8B1 (ENSOARG00020024029) NARS1 (ENSOARG00020024002) FECH (ENSOARG00020023945) ONECUT2 (ENSOARG00020023929) ST8SIA3 (ENSOARG00020023917) WDR7 (ENSOARG00020023720) ENSOARG00020023680 TXNL1 (ENSOARG00020023636) ENSOARG00020023628 TCF4 (ENSOARG00020018136) #22 CCDC68 (ENSOARG00020017914) #23 RAB27B (ENSOARG00020017852) #24 ENSOARG00020017825 STARD6 (ENSOARG00020017708) #27 POLI (ENSOARG00020017236) #28 MBD2 (ENSOARG00020016893) #29 ENSOARG00020016832 DCC (ENSOARG00020016246) ENSOARG00020016162 MEX3C (ENSOARG00020016147) SMAD4 (ENSOARG00020016034) ELAC1 (ENSOARG00020015975) ME2 (ENSOARG00020015563) MRO (ENSOARG00020015446) MAPK4 (ENSOARG00020015369) Bovinae ANCESTRAL SPECIES 28 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00960000190719 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Bos ANCESTRAL SPECIES 29 ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000170462 ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00960000190719 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 Bos_a ANCESTRAL SPECIES 28 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000170462 ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00400000022381 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00970000193421.C.a ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b Domestic yak MODERN SPECIES 13 ZNF532 (ENSBGRG00000014854) MALT1 (ENSBGRG00000014428) ALPK2 (ENSBGRG00000014330) NEDD4L (ENSBGRG00000012253) ATP8B1 (ENSBGRG00000011855) NARS1 (ENSBGRG00000011626) FECH (ENSBGRG00000011304) ONECUT2 (ENSBGRG00000011131) ST8SIA3 (ENSBGRG00000011078) ENSBGRG00000011043 WDR7 (ENSBGRG00000010762) TXNL1 (ENSBGRG00000010589) ENSBGRG00000010575 ENSBGRG00000026057 ENSBGRG00000026050 TCF4 (ENSBGRG00000025535) #22 CCDC68 (ENSBGRG00000025432) #23 RAB27B (ENSBGRG00000025409) #24 ENSBGRG00000025400 #25 ENSBGRG00000025356 ENSBGRG00000025352 ENSBGRG00000025328 C18orf54 (ENSBGRG00000025272) #26 STARD6 (ENSBGRG00000025257) #27 POLI (ENSBGRG00000025249) #28 MBD2 (ENSBGRG00000025200) #29 DCC (ENSBGRG00000024683) ENSBGRG00000024631 MEX3C (ENSBGRG00000024594) SMAD4 (ENSBGRG00000024537) ELAC1 (ENSBGRG00000024517) Wild yak MODERN SPECIES 856 FECH (ENSBMUG00000023127) ONECUT2 (ENSBMUG00000022992) ST8SIA3 (ENSBMUG00000022982) WDR7 (ENSBMUG00000022932) TXNL1 (ENSBMUG00000022845) TCF4 (ENSBMUG00000022449) #22 Bos_b ANCESTRAL SPECIES 34 ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000170462 ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00900000143822 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00970000197079 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00960000190719 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b Cow MODERN SPECIES 16 RAX (ENSBTAG00000022826) GRP (ENSBTAG00000004796) SEC11C (ENSBTAG00000011954) OACYL (ENSBTAG00000022829) ZNF532 (ENSBTAG00000013588) MALT1 (ENSBTAG00000027916) ALPK2 (ENSBTAG00000014284) NEDD4L (ENSBTAG00000005412) ATP8B1 (ENSBTAG00000005738) NARS1 (ENSBTAG00000019271) FECH (ENSBTAG00000006393) ONECUT2 (ENSBTAG00000022819) ST8SIA3 (ENSBTAG00000007347) WDR7 (ENSBTAG00000004005) TXNL1 (ENSBTAG00000015731) TCF4 (ENSBTAG00000016462) #22 CCDC68 (ENSBTAG00000008158) #23 RAB27B (ENSBTAG00000002788) #24 ENSBTAG00000013871 #25 CUPIN1 (ENSBTAG00000048804) C24H18orf54 (ENSBTAG00000008169) #26 STARD6 (ENSBTAG00000008168) #27 POLI (ENSBTAG00000009129) #28 ENSBTAG00000049603 MBD2 (ENSBTAG00000037457) #29 DCC (ENSBTAG00000048378) ENSBTAG00000049503 MEX3C (ENSBTAG00000014886) SMAD4 (ENSBTAG00000006919) ELAC1 (ENSBTAG00000005683) ME2 (ENSBTAG00000016269) Hybrid Bos Indicus MODERN SPECIES 16 ENSBIXG00005022330 ENSBIXG00005022390 ZNF532 (ENSBIXG00005006162) MALT1 (ENSBIXG00005022754) ENSBIXG00005022790 ALPK2 (ENSBIXG00005007380) NEDD4L (ENSBIXG00005023150) ATP8B1 (ENSBIXG00005023321) NARS1 (ENSBIXG00005023373) FECH (ENSBIXG00005006900) ONECUT2 (ENSBIXG00005023442) ST8SIA3 (ENSBIXG00005023483) WDR7 (ENSBIXG00005006281) TXNL1 (ENSBIXG00005023757) ENSBIXG00005023809 TCF4 (ENSBIXG00005024466) #22 CCDC68 (ENSBIXG00005024584) #23 RAB27B (ENSBIXG00005024664) #24 C18orf54 (ENSBIXG00005024871) #26 STARD6 (ENSBIXG00005024888) #27 POLI (ENSBIXG00005024986) #28 ENSBIXG00005025038 ENSBIXG00005025041 MBD2 (ENSBIXG00005004276) #29 DCC (ENSBIXG00005004333) ENSBIXG00005025532 ENSBIXG00005025566 MEX3C (ENSBIXG00005025578) SMAD4 (ENSBIXG00005025648) ELAC1 (ENSBIXG00005025678) ME2 (ENSBIXG00005025823) American bison MODERN SPECIES 3263 ENSBBBG00000019990 SEC11C (ENSBBBG00000019988) ENSBBBG00000019963 ZNF532 (ENSBBBG00000019954) MALT1 (ENSBBBG00000019928) ALPK2 (ENSBBBG00000019837) NEDD4L (ENSBBBG00000019802) ATP8B1 (ENSBBBG00000005293) NARS1 (ENSBBBG00000019498) FECH (ENSBBBG00000005210) ONECUT2 (ENSBBBG00000019474) ST8SIA3 (ENSBBBG00000019465) WDR7 (ENSBBBG00000008661) TXNL1 (ENSBBBG00000019350) ENSBBBG00000005021 TCF4 (ENSBBBG00000019287) #22 CCDC68 (ENSBBBG00000004722) #23 RAB27B (ENSBBBG00000018758) #24 C18orf54 (ENSBBBG00000004674) #26 STARD6 (ENSBBBG00000018687) #27 POLI (ENSBBBG00000004646) #28 MBD2 (ENSBBBG00000018660) #29 DCC (ENSBBBG00000018654) ENSBBBG00000018605 Siberian musk deer MODERN SPECIES 144 ENSMMSG00000002882 ZNF532 (ENSMMSG00000002920) MALT1 (ENSMMSG00000002981) ALPK2 (ENSMMSG00000003102) ENSMMSG00000003286 ENSMMSG00000005077 ENSMMSG00000005093 ATP8B1 (ENSMMSG00000005113) NARS1 (ENSMMSG00000005213) ENSMMSG00000005331 ONECUT2 (ENSMMSG00000005376) ENSMMSG00000005402 ST8SIA3 (ENSMMSG00000005434) WDR7 (ENSMMSG00000005494) TXNL1 (ENSMMSG00000005607) TCF4 (ENSMMSG00000005751) #22 CCDC68 (ENSMMSG00000006394) #23 RAB27B (ENSMMSG00000006425) #24 ENSMMSG00000006452 #25 C18orf54 (ENSMMSG00000006467) #26 STARD6 (ENSMMSG00000006521) #27 POLI (ENSMMSG00000006558) #28 MBD2 (ENSMMSG00000006632) #29 Yarkand deer MODERN SPECIES 19 ZNF532 (ENSCHYG00000022867) MALT1 (ENSCHYG00000022978) ENSCHYG00000023381 ALPK2 (ENSCHYG00000023394) NEDD4L (ENSCHYG00000023607) ATP8B1 (ENSCHYG00000024325) NARS1 (ENSCHYG00000024390) FECH (ENSCHYG00000024418) ONECUT2 (ENSCHYG00000024475) ST8SIA3 (ENSCHYG00000024501) ENSCHYG00000024523 WDR7 (ENSCHYG00000024551) ENSCHYG00000024655 TXNL1 (ENSCHYG00000024776) ENSCHYG00000024892 TCF4 (ENSCHYG00000024974) #22 CCDC68 (ENSCHYG00000025233) #23 RAB27B (ENSCHYG00000025256) #24 ENSCHYG00000025287 #25 ENSCHYG00000025310 C18orf54 (ENSCHYG00000025339) #26 STARD6 (ENSCHYG00000025439) #27 POLI (ENSCHYG00000025478) #28 MBD2 (ENSCHYG00000025532) #29 DCC (ENSCHYG00000025701) ENSCHYG00000025951 ENSCHYG00000025960 ENSCHYG00000025969 ENSCHYG00000025984 ENSCHYG00000025987 MEX3C (ENSCHYG00000025999) Camelidae ANCESTRAL SPECIES 53 ENSGT00860000135405 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00400000022381 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 Alpaca MODERN SPECIES 483 TCF4 (ENSVPAG00000012308) #22 CCDC68 (ENSVPAG00000012306) #23 RAB27B (ENSVPAG00000012304) #24 ENSVPAG00000012302 C18orf54 (ENSVPAG00000012301) #26 STARD6 (ENSVPAG00000012300) #27 POLI (ENSVPAG00000012299) #28 ENSVPAG00000012298 #29 Arabian camel MODERN SPECIES 23 ENSCDRG00005019232 GRP (ENSCDRG00005019247) SEC11C (ENSCDRG00005019271) ENSCDRG00005019306 ZNF532 (ENSCDRG00005019327) MALT1 (ENSCDRG00005019352) ALPK2 (ENSCDRG00005019531) NEDD4L (ENSCDRG00005019612) ATP8B1 (ENSCDRG00005019962) NARS1 (ENSCDRG00005019984) FECH (ENSCDRG00005020023) ONECUT2 (ENSCDRG00005020043) ST8SIA3 (ENSCDRG00005020077) WDR7 (ENSCDRG00005020090) TXNL1 (ENSCDRG00005020164) TCF4 (ENSCDRG00005020285) #22 CCDC68 (ENSCDRG00005021671) #23 RAB27B (ENSCDRG00005021672) #24 ENSCDRG00005021674 C18orf54 (ENSCDRG00005021676) #26 STARD6 (ENSCDRG00005021679) #27 POLI (ENSCDRG00005021682) #28 MBD2 (ENSCDRG00005021689) #29 DCC (ENSCDRG00005021692) MEX3C (ENSCDRG00005008924) SMAD4 (ENSCDRG00005009019) ELAC1 (ENSCDRG00005009129) ME2 (ENSCDRG00005009190) MRO (ENSCDRG00005009438) MAPK4 (ENSCDRG00005009618) SKA1 (ENSCDRG00005009696) Atlantogenata ANCESTRAL SPECIES 22 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Afrotheria ANCESTRAL SPECIES 23 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Tenrec MODERN SPECIES 8042 TCF4 (ENSETEG00000001948) #22 Afrotheria_a ANCESTRAL SPECIES 22 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 Hyrax MODERN SPECIES 6782 TCF4 (ENSPCAG00000010177) #22 Elephant MODERN SPECIES 375 RAX (ENSLAFG00000017930) GRP (ENSLAFG00000008342) SEC11C (ENSLAFG00000008344) ENSLAFG00000029865 ZNF532 (ENSLAFG00000001170) MALT1 (ENSLAFG00000018379) ALPK2 (ENSLAFG00000007371) NEDD4L (ENSLAFG00000011109) ATP8B1 (ENSLAFG00000000562) NARS1 (ENSLAFG00000000559) FECH (ENSLAFG00000000056) ONECUT2 (ENSLAFG00000032649) ST8SIA3 (ENSLAFG00000017954) WDR7 (ENSLAFG00000015260) TXNL1 (ENSLAFG00000009689) TCF4 (ENSLAFG00000013449) #22 CCDC68 (ENSLAFG00000001222) #23 RAB27B (ENSLAFG00000001220) #24 ENSLAFG00000029901 #25 ENSLAFG00000028483 C18orf54 (ENSLAFG00000014151) #26 STARD6 (ENSLAFG00000014148) #27 POLI (ENSLAFG00000014138) #28 MBD2 (ENSLAFG00000014135) #29 DCC (ENSLAFG00000001980) MEX3C (ENSLAFG00000027818) SMAD4 (ENSLAFG00000012595) ELAC1 (ENSLAFG00000001538) ME2 (ENSLAFG00000001536) MRO (ENSLAFG00000013029) MAPK4 (ENSLAFG00000013022) Xenarthra ANCESTRAL SPECIES 588 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00730000111785 #25 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 Sloth MODERN SPECIES 7175 TCF4 (ENSCHOG00000000331) #22 Armadillo MODERN SPECIES 1675 CISD2 (ENSDNOG00000014054) MANBA (ENSDNOG00000044494) NFKB1 (ENSDNOG00000006855) ENSDNOG00000041391 TCF4 (ENSDNOG00000013859) #22 CCDC68 (ENSDNOG00000037381) #23 RAB27B (ENSDNOG00000001193) #24 ENSDNOG00000035752 #25 C18orf54 (ENSDNOG00000000394) #26 STARD6 (ENSDNOG00000000391) #27 POLI (ENSDNOG00000009775) #28 MBD2 (ENSDNOG00000033421) #29 ENSDNOG00000049066 Marsupialia ANCESTRAL SPECIES 1 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00940000166139 Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00950000182938.b.b.b.b.b.b ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00940000166139 Diprotodontia ANCESTRAL SPECIES 1 ENSGT00950000182938.b.b.b.b.b.b ENSGT00860000135405 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00940000166139 Diprotodontia_a ANCESTRAL SPECIES ENSGT00950000182938.b.b.b.b.b.b ENSGT00860000135405 ENSGT00940000154470.a ENSGT00390000015600.c.b.a ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000161642 ENSGT00940000159850 ENSGT00940000166139 koala MODERN SPECIES 3 ENSPCIG00000035684 ENSPCIG00000011018 ENSPCIG00000011020 ZNF532 (ENSPCIG00000011029) MALT1 (ENSPCIG00000011036) ENSPCIG00000011040 NEDD4L (ENSPCIG00000011048) ATP8B1 (ENSPCIG00000020189) NARS1 (ENSPCIG00000020193) FECH (ENSPCIG00000020204) ONECUT2 (ENSPCIG00000004727) ST8SIA3 (ENSPCIG00000013290) ENSPCIG00000020209 WDR7 (ENSPCIG00000020218) TXNL1 (ENSPCIG00000026902) TCF4 (ENSPCIG00000025249) #22 CCDC68 (ENSPCIG00000025247) #23 ENSPCIG00000025246 RAB27B (ENSPCIG00000025245) #24 ENSPCIG00000003646 C18orf54 (ENSPCIG00000003643) #26 STARD6 (ENSPCIG00000003633) #27 POLI (ENSPCIG00000003617) #28 MBD2 (ENSPCIG00000003608) #29 ENSPCIG00000028462 Common wonbat MODERN SPECIES 1028 SEC11C (ENSVURG00010004365) ZNF532 (ENSVURG00010004319) MALT1 (ENSVURG00010004098) ENSVURG00010004061 NEDD4L (ENSVURG00010003901) ENSVURG00010003773 ATP8B1 (ENSVURG00010003748) NARS1 (ENSVURG00010003689) FECH (ENSVURG00010003679) ONECUT2 (ENSVURG00010003616) ST8SIA3 (ENSVURG00010003611) WDR7 (ENSVURG00010003473) TXNL1 (ENSVURG00010003367) ENSVURG00010003325 ENSVURG00010003280 TCF4 (ENSVURG00010002348) #22 CCDC68 (ENSVURG00010002283) #23 RAB27B (ENSVURG00010002263) #24 ENSVURG00010002202 ENSVURG00010002151 #26 STARD6 (ENSVURG00010002017) #27 POLI (ENSVURG00010001983) #28 MBD2 (ENSVURG00010001720) #29 DCC (ENSVURG00010001452) MEX3C (ENSVURG00010001250) SMAD4 (ENSVURG00010001174) ELAC1 (ENSVURG00010001144) ME2 (ENSVURG00010001127) MRO (ENSVURG00010001023) MAPK4 (ENSVURG00010001000) ENSVURG00010000853 Wallaby MODERN SPECIES 9649 TCF4 (ENSMEUG00000003794) #22 Tasmanian devil MODERN SPECIES CPLX4 (ENSSHAG00000025319) RAX (ENSSHAG00000012595) ENSSHAG00000012832 SEC11C (ENSSHAG00000021865) ZNF532 (ENSSHAG00000014125) MALT1 (ENSSHAG00000015083) ENSSHAG00000015598 NEDD4L (ENSSHAG00000016231) ATP8B1 (ENSSHAG00000017716) NARS1 (ENSSHAG00000017850) FECH (ENSSHAG00000017884) ONECUT2 (ENSSHAG00000031060) ST8SIA3 (ENSSHAG00000029418) WDR7 (ENSSHAG00000002601) TXNL1 (ENSSHAG00000005730) TCF4 (ENSSHAG00000014955) #22 CCDC68 (ENSSHAG00000016955) #23 RAB27B (ENSSHAG00000017123) #24 ENSSHAG00000001686 #26 STARD6 (ENSSHAG00000029009) #27 POLI (ENSSHAG00000004343) #28 ENSSHAG00000029668 #29 DCC (ENSSHAG00000012360) ENSSHAG00000024378 MEX3C (ENSSHAG00000009408) SMAD4 (ENSSHAG00000010344) ELAC1 (ENSSHAG00000028282) ME2 (ENSSHAG00000014027) ENSSHAG00000008004 ENSSHAG00000013029 ENSSHAG00000010788 Opossum MODERN SPECIES 2 ENSMODG00000025618 ENSMODG00000020427 ENSMODG00000050501 ENSMODG00000020430 ZNF532 (ENSMODG00000020433) MALT1 (ENSMODG00000020434) ENSMODG00000020435 NEDD4L (ENSMODG00000020439) ATP8B1 (ENSMODG00000020443) NARS1 (ENSMODG00000020445) ENSMODG00000020447 ONECUT2 (ENSMODG00000020448) ST8SIA3 (ENSMODG00000020449) WDR7 (ENSMODG00000020452) TXNL1 (ENSMODG00000020454) TCF4 (ENSMODG00000020455) #22 ENSMODG00000024788 CCDC68 (ENSMODG00000020457) #23 RAB27B (ENSMODG00000050980) #24 ENSMODG00000021517 ENSMODG00000044526 ENSMODG00000024783 CHST9 (ENSMODG00000021515) AQP4 (ENSMODG00000021514) KCTD1 (ENSMODG00000021513) ENSMODG00000027618 TAF4B (ENSMODG00000021512) PSMA8 (ENSMODG00000021511) SS18 (ENSMODG00000021510) ZNF521 (ENSMODG00000021509) ENSMODG00000042471 Platypus MODERN SPECIES 14 ENSOANG00000003435 RAX (ENSOANG00000003437) ENSOANG00000031147 SEC11C (ENSOANG00000030035) ZNF532 (ENSOANG00000003439) MALT1 (ENSOANG00000003440) ENSOANG00000014107 NEDD4L (ENSOANG00000014105) ATP8B1 (ENSOANG00000001718) NARS1 (ENSOANG00000001717) FECH (ENSOANG00000001716) ONECUT2 (ENSOANG00000001715) ST8SIA3 (ENSOANG00000001713) WDR7 (ENSOANG00000001712) TXNL1 (ENSOANG00000001710) TCF4 (ENSOANG00000003082) #22 ENSOANG00000036676 ENSOANG00000031527 #23 RAB27B (ENSOANG00000051201) #24 ENSOANG00000044861 C3H18orf54 (ENSOANG00000001795) #26 STARD6 (ENSOANG00000041469) #27 POLI (ENSOANG00000001796) #28 MBD2 (ENSOANG00000001797) #29 DCC (ENSOANG00000008115) ENSOANG00000008116 SMAD4 (ENSOANG00000008117) ELAC1 (ENSOANG00000008118) ME2 (ENSOANG00000008119) ENSOANG00000008122 ENSOANG00000045887 Sauria ANCESTRAL SPECIES 5 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 Archelosauria ANCESTRAL SPECIES 7 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 Archosauria ANCESTRAL SPECIES 1 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 Australian saltwater crocodile MODERN SPECIES 29 CPLX4 (ENSCPRG00005013040) ENSCPRG00005013043 ENSCPRG00005013046 SEC11C (ENSCPRG00005013050) ENSCPRG00005013057 ZNF532 (ENSCPRG00005013067) MALT1 (ENSCPRG00005013074) NEDD4L (ENSCPRG00005013249) ATP8B1 (ENSCPRG00005014069) NARS1 (ENSCPRG00005014084) FECH (ENSCPRG00005014093) ONECUT2 (ENSCPRG00005014095) ST8SIA3 (ENSCPRG00005014098) WDR7 (ENSCPRG00005014111) TXNL1 (ENSCPRG00005014122) TCF4 (ENSCPRG00005014144) #22 CCDC68 (ENSCPRG00005014153) #23 RAB27B (ENSCPRG00005014155) #24 ELAC1 (ENSCPRG00005014160) ME2 (ENSCPRG00005014168) ENSCPRG00005014216 ENSCPRG00005014610 ENSCPRG00005014614 ACAA2 (ENSCPRG00005014619) LIPG (ENSCPRG00005014622) ENSCPRG00005014628 C18orf32 (ENSCPRG00005014637) DYM (ENSCPRG00005014651) SMAD7 (ENSCPRG00005014735) CTIF (ENSCPRG00005014748) ZBTB7C (ENSCPRG00005014760) Aves ANCESTRAL SPECIES 4 ENSGT00950000182938.b.b.b.b.b.b ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 African ostrich MODERN SPECIES 306 MALT1 (ENSSCUG00000001403) ALPK2 (ENSSCUG00000001413) NEDD4L (ENSSCUG00000001428) ATP8B1 (ENSSCUG00000001441) NARS1 (ENSSCUG00000001444) FECH (ENSSCUG00000001448) ST8SIA3 (ENSSCUG00000001452) ENSSCUG00000001456 ENSSCUG00000001460 TXNL1 (ENSSCUG00000001464) TCF4 (ENSSCUG00000001476) #22 CCDC68 (ENSSCUG00000001483) #23 RAB27B (ENSSCUG00000001487) #24 ENSSCUG00000001491 C18orf54 (ENSSCUG00000001496) #26 STARD6 (ENSSCUG00000001499) #27 POLI (ENSSCUG00000001500) #28 MBD2 (ENSSCUG00000001502) #29 DCC (ENSSCUG00000001506) MEX3C (ENSSCUG00000001508) SMAD4 (ENSSCUG00000001512) ELAC1 (ENSSCUG00000001521) ME2 (ENSSCUG00000001529) MAPK4 (ENSSCUG00000001532) ENSSCUG00000001533 ENSSCUG00000001536 Neognathae ANCESTRAL SPECIES 12 ENSGT00950000182938.b.b.b.b.b.b ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 Neognathae_b ANCESTRAL SPECIES 5 ENSGT00950000182938.b.b.b.b.b.b ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 Passeriformes ANCESTRAL SPECIES 55 ENSGT00950000182938.b.b.b.b.b.b ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 Passeriformes_d ANCESTRAL SPECIES 6 ENSGT00950000182938.b.b.b.b.b.b ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 Flycatcher MODERN SPECIES 274 NEDD4L (ENSFALG00000011721) ATP8B1 (ENSFALG00000011710) FECH (ENSFALG00000011690) ONECUT2 (ENSFALG00000027141) ST8SIA3 (ENSFALG00000011668) NARS1 (ENSFALG00000011698) WDR7 (ENSFALG00000011623) TXNL1 (ENSFALG00000011580) ENSFALG00000028187 #22 ENSFALG00000025791 Passeriformes_g ANCESTRAL SPECIES 64 ENSGT00950000182938.b.b.b.b.b.b ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 Medium ground finch MODERN SPECIES 287 SEC11C (ENSGFOG00000009214) ZNF532 (ENSGFOG00000009205) MALT1 (ENSGFOG00000009146) ENSGFOG00000009126 ENSGFOG00000009121 NEDD4L (ENSGFOG00000004215) ATP8B1 (ENSGFOG00000004122) NARS1 (ENSGFOG00000004107) FECH (ENSGFOG00000004071) ST8SIA3 (ENSGFOG00000004056) ENSGFOG00000004039 ENSGFOG00000004034 ENSGFOG00000004026 TXNL1 (ENSGFOG00000003998) ENSGFOG00000003976 ENSGFOG00000003956 #22 Passeroidea ANCESTRAL SPECIES 67 ENSGT00950000182938.b.b.b.b.b.b ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 Common canary MODERN SPECIES 149 ENSSCAG00000016607 ENSSCAG00000016604 #22 Zebra finch MODERN SPECIES 104 RAX (ENSTGUG00000017482) GRP (ENSTGUG00000023555) SEC11C (ENSTGUG00000019770) ZNF532 (ENSTGUG00000017487) MALT1 (ENSTGUG00000017488) ENSTGUG00000020786 NEDD4L (ENSTGUG00000017490) ATP8B1 (ENSTGUG00000017491) NARS1 (ENSTGUG00000017495) FECH (ENSTGUG00000025498) ONECUT2 (ENSTGUG00000029312) ST8SIA3 (ENSTGUG00000019606) WDR7 (ENSTGUG00000017505) TXNL1 (ENSTGUG00000017510) ENSTGUG00000020737 ENSTGUG00000027865 #22 ENSTGUG00000024994 ENSTGUG00000015973 ENSTGUG00000024134 ENSTGUG00000022392 ENSTGUG00000000383 ENSTGUG00000003740 ENSTGUG00000022476 CHSY3 (ENSTGUG00000000380) MINAR2 (ENSTGUG00000018154) ADAMTS19 (ENSTGUG00000000365) ISOC1 (ENSTGUG00000000362) SLC27A6 (ENSTGUG00000000343) SLC44A1 (ENSTGUG00000000337) ABCA1 (ENSTGUG00000000310) ENSTGUG00000025719 Neognathae_c ANCESTRAL SPECIES 2 ENSGT00950000182938.b.b.b.b.b.b ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 Golden eagle MODERN SPECIES 91 CPLX4 (ENSACCG00020010522) RAX (ENSACCG00020010514) GRP (ENSACCG00020010500) SEC11C (ENSACCG00020010494) ZNF532 (ENSACCG00020010482) MALT1 (ENSACCG00020010455) ALPK2 (ENSACCG00020010435) NEDD4L (ENSACCG00020010386) ATP8B1 (ENSACCG00020010228) NARS1 (ENSACCG00020010122) FECH (ENSACCG00020010089) ONECUT2 (ENSACCG00020010082) ST8SIA3 (ENSACCG00020010073) WDR7 (ENSACCG00020010051) TXNL1 (ENSACCG00020010009) TCF4 (ENSACCG00020009960) #22 RAB27B (ENSACCG00020009910) #24 ENSACCG00020009898 ENSACCG00020009877 #26 STARD6 (ENSACCG00020009847) #27 POLI (ENSACCG00020009836) #28 MBD2 (ENSACCG00020009819) #29 DCC (ENSACCG00020009773) ENSACCG00020009660 MEX3C (ENSACCG00020009646) SMAD4 (ENSACCG00020009624) ELAC1 (ENSACCG00020009599) ENSACCG00020009582 ME2 (ENSACCG00020009563) MAPK4 (ENSACCG00020009547) ENSACCG00020009534 Kakapo MODERN SPECIES 64 CPLX4 (ENSSHBG00005014721) RAX (ENSSHBG00005014711) GRP (ENSSHBG00005014702) SEC11C (ENSSHBG00005014696) ZNF532 (ENSSHBG00005014681) MALT1 (ENSSHBG00005014034) ENSSHBG00005013989 NEDD4L (ENSSHBG00005013951) ATP8B1 (ENSSHBG00005013864) NARS1 (ENSSHBG00005013837) FECH (ENSSHBG00005013828) ONECUT2 (ENSSHBG00005013820) ST8SIA3 (ENSSHBG00005013813) WDR7 (ENSSHBG00005013806) TXNL1 (ENSSHBG00005013793) TCF4 (ENSSHBG00005013770) #22 ENSSHBG00005013724 ENSSHBG00005013714 C18orf54 (ENSSHBG00005013687) #26 ENSSHBG00005013679 ENSSHBG00005013656 #24 CCDC68 (ENSSHBG00005013647) #23 Galloanserae DUPLICATION Galloanserae DUPLICATION Galloanserae ANCESTRAL SPECIES ENSGT00940000159129.o.a #22 Phasianidae ANCESTRAL SPECIES ENSGT00940000159129.o.a #22 Phasianidae_b ANCESTRAL SPECIES ENSGT00940000159129.o.a #22 Chicken MODERN SPECIES 130 ENSGALG00010013547 ENSGALG00010011577 ENSGALG00010011595 ENSGALG00010011584 ENSGALG00010011307 ENSGALG00010011555 ENSGALG00010013535 ENSGALG00010011527 ENSGALG00010011518 ENSGALG00010011510 ENSGALG00010011493 ENSGALG00010011467 ENSGALG00010011443 ENSGALG00010011442 UBAP2L2 (ENSGALG00010011436) ENSGALG00010011360 #22 ENSGALG00010012118 MBD2 (ENSGALG00010012112) ##29 ENSGALG00010012103 ENSGALG00010012091 ENSGALG00010012079 ENSGALG00010012076 ENSGALG00010012073 ENSGALG00010013871 ENSGALG00010013577 ENSGALG00010012056 ENSGALG00010012057 ENSGALG00010013889 ENSGALG00010012044 Galloanserae ANCESTRAL SPECIES ENSGT00940000159129.o.b #22 Phasianidae ANCESTRAL SPECIES ENSGT00940000159129.o.b #22 Phasianidae_b ANCESTRAL SPECIES ENSGT00940000159129.o.b #22 Chicken MODERN SPECIES 131 RAX (ENSGALG00010010409) GRP (ENSGALG00010010395) SEC11C (ENSGALG00010010382) ENSGALG00010010368 PCASP1 (ENSGALG00010010352) ALPK2 (ENSGALG00010010330) NEDD4L (ENSGALG00010010322) TXNL1 (ENSGALG00010010288) WDR7 (ENSGALG00010010252) ST8SIA3 (ENSGALG00010010548) ONECUT2 (ENSGALG00010011008) FECH (ENSGALG00010011003) NARS (ENSGALG00010010986) ATP8B1 (ENSGALG00010010975) ENSGALG00010010165 ENSGALG00010010124 #22 ENSGALG00010012283 MBD2 (ENSGALG00010012260) ##29 ENSGALG00010009370 ENSGALG00010011173 ENSGALG00010011148 ENSGALG00010011119 ENSGALG00010011107 Anatidae ANCESTRAL SPECIES 55 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129.p #22 ENSGT00940000159129.o.b #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT01030000234969 ENSGT00940000166139 Pink-footed goose MODERN SPECIES 124 CPLX4 (ENSABRG00000021441) RAX (ENSABRG00000021438) ENSABRG00000021433 SEC11C (ENSABRG00000021430) ZNF532 (ENSABRG00000021427) MALT1 (ENSABRG00000021417) ALPK2 (ENSABRG00000021413) NEDD4L (ENSABRG00000021385) ATP8B1 (ENSABRG00000021054) NARS1 (ENSABRG00000021002) FECH (ENSABRG00000020998) ONECUT2 (ENSABRG00000020995) ST8SIA3 (ENSABRG00000020992) WDR7 (ENSABRG00000020984) TXNL1 (ENSABRG00000020980) TCF4 (ENSABRG00000020955) #22 CCDC68 (ENSABRG00000020946) #23 RAB27B (ENSABRG00000020939) #24 ENSABRG00000020934 ENSABRG00000020928 #26 STARD6 (ENSABRG00000020923) #27 POLI (ENSABRG00000020917) #28 MBD2 (ENSABRG00000020912) #29 DCC (ENSABRG00000020894) MEX3C (ENSABRG00000020874) SMAD4 (ENSABRG00000020871) ELAC1 (ENSABRG00000020869) ME2 (ENSABRG00000020867) MAPK4 (ENSABRG00000020865) ENSABRG00000020863 ENSABRG00000020860 Galloanserae ANCESTRAL SPECIES 11 ENSGT00950000182938.b.b.b.b.b.b ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129.p #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 Phasianidae ANCESTRAL SPECIES 5 ENSGT00950000182938.b.b.b.b.b.b ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437.ad.b ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873.f ENSGT00940000156170.b ENSGT00940000155301 ENSGT01030000234535.E.a ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000158002 ENSGT00940000159129.p #22 ENSGT00950000183005.a.a ##29 ENSGT00940000157435 ENSGT00950000183134.c.b ENSGT00940000166139 Japanese quail MODERN SPECIES 699 GRP (ENSCJPG00005004907) SEC11C (ENSCJPG00005004904) ZNF532 (ENSCJPG00005004899) MALT1 (ENSCJPG00005004888) ALPK2 (ENSCJPG00005004887) NEDD4L (ENSCJPG00005004869) TXNL1 (ENSCJPG00005004863) WDR7 (ENSCJPG00005004845) ST8SIA3 (ENSCJPG00005004844) ENSCJPG00005004843 ONECUT2 (ENSCJPG00005004841) FECH (ENSCJPG00005004838) NARS1 (ENSCJPG00005004836) ATP8B1 (ENSCJPG00005004832) ENSCJPG00005004821 ENSCJPG00005004819 #22 Phasianidae_b ANCESTRAL SPECIES ENSGT00940000159129.p #22 Turkey DUPLICATION Turkey MODERN SPECIES 1299 SEC11C (ENSMGAG00000001165) ENSMGAG00000001162 MALT1 (ENSMGAG00000001082) ENSMGAG00000001342 ALPK2 (ENSMGAG00000018725) ENSMGAG00000021263 NEDD4L (ENSMGAG00000000935) ENSMGAG00000001140 ENSMGAG00000001102 ENSMGAG00000003266 ENSMGAG00000019892 ENSMGAG00000018982 ENSMGAG00000010041 NARS1 (ENSMGAG00000019288) ENSMGAG00000017737 ENSMGAG00000019594 #22 Turkey MODERN SPECIES 1109 ENSMGAG00000018142 ENSMGAG00000017938 #22 Anatidae ANCESTRAL SPECIES 55 ENSGT00950000182938.b.b.b.b.b.b ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129.p #22 ENSGT00940000159129.o.b #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT01030000234969 Duck DUPLICATION Duck MODERN SPECIES 4281 ENSAPLG00000001120 LMAN1 (ENSAPLG00000010808) CPLX4 (ENSAPLG00000010654) RAX (ENSAPLG00000001823) ENSAPLG00000022526 ZNF532 (ENSAPLG00000010349) MALT1 (ENSAPLG00000010083) ENSAPLG00000018933 NEDD4L (ENSAPLG00000008925) ENSAPLG00000020951 ATP8B1 (ENSAPLG00000002575) FECH (ENSAPLG00000015242) WDR7 (ENSAPLG00000014993) TXNL1 (ENSAPLG00000015099) ENSAPLG00000017851 #22 TCF4 (ENSAPLG00000011135) #22 CCDC68 (ENSAPLG00000010764) #23 RAB27B (ENSAPLG00000023455) #24 ENSAPLG00000030416 C18orf54 (ENSAPLG00000010526) #26 STARD6 (ENSAPLG00000021618) #27 POLI (ENSAPLG00000010510) #28 MBD2 (ENSAPLG00000010058) #29 DCC (ENSAPLG00000009368) MEX3C (ENSAPLG00000003916) SMAD4 (ENSAPLG00000003924) ELAC1 (ENSAPLG00000007218) ME2 (ENSAPLG00000004164) MAPK4 (ENSAPLG00000004651) ENSAPLG00000004736 ENSAPLG00000004971 Duck MODERN SPECIES 4281 CELF4 (ENSAPLG00000007830) ENSAPLG00000001120 LMAN1 (ENSAPLG00000010808) CPLX4 (ENSAPLG00000010654) RAX (ENSAPLG00000001823) ENSAPLG00000022526 ZNF532 (ENSAPLG00000010349) MALT1 (ENSAPLG00000010083) ENSAPLG00000018933 NEDD4L (ENSAPLG00000008925) ENSAPLG00000020951 ATP8B1 (ENSAPLG00000002575) FECH (ENSAPLG00000015242) WDR7 (ENSAPLG00000014993) TXNL1 (ENSAPLG00000015099) ENSAPLG00000017851 #22 TCF4 (ENSAPLG00000011135) #22 CCDC68 (ENSAPLG00000010764) #23 RAB27B (ENSAPLG00000023455) #24 ENSAPLG00000030416 C18orf54 (ENSAPLG00000010526) #26 STARD6 (ENSAPLG00000021618) #27 POLI (ENSAPLG00000010510) #28 MBD2 (ENSAPLG00000010058) #29 DCC (ENSAPLG00000009368) MEX3C (ENSAPLG00000003916) SMAD4 (ENSAPLG00000003924) ELAC1 (ENSAPLG00000007218) ME2 (ENSAPLG00000004164) MAPK4 (ENSAPLG00000004651) ENSAPLG00000004736 Cryptodira ANCESTRAL SPECIES 9 ENSGT00940000154470.a ENSGT00960000189477 ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 ENSGT01030000235140 Chinese turtle MODERN SPECIES 572 SEC11C (ENSPSIG00000008662) ENSPSIG00000008674 ZNF532 (ENSPSIG00000008888) MALT1 (ENSPSIG00000009449) ENSPSIG00000009894 ENSPSIG00000010023 NEDD4L (ENSPSIG00000010287) ATP8B1 (ENSPSIG00000011891) NARS1 (ENSPSIG00000012221) FECH (ENSPSIG00000012667) ONECUT2 (ENSPSIG00000013194) ST8SIA3 (ENSPSIG00000013198) WDR7 (ENSPSIG00000013375) ENSPSIG00000014425 TXNL1 (ENSPSIG00000014463) TCF4 (ENSPSIG00000014469) #22 CCDC68 (ENSPSIG00000014725) #23 RAB27B (ENSPSIG00000014730) #24 Testudinoidea ANCESTRAL SPECIES 7 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 ENSGT01030000235140 Emydidae ANCESTRAL SPECIES 7 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 ENSGT01030000235140 Three-toed box turtle MODERN SPECIES 29 RAX (ENSTMTG00000001147) GRP (ENSTMTG00000001133) ENSTMTG00000001107 ZNF532 (ENSTMTG00000000959) MALT1 (ENSTMTG00000000902) ALPK2 (ENSTMTG00000000872) NEDD4L (ENSTMTG00000000822) ATP8B1 (ENSTMTG00000000778) NARS1 (ENSTMTG00000000755) FECH (ENSTMTG00000000750) ONECUT2 (ENSTMTG00000000742) ST8SIA3 (ENSTMTG00000000736) ENSTMTG00000000724 ENSTMTG00000000713 TXNL1 (ENSTMTG00000000698) TCF4 (ENSTMTG00000000670) #22 CCDC68 (ENSTMTG00000000639) #23 RAB27B (ENSTMTG00000000618) #24 C18orf54 (ENSTMTG00000000605) #26 POLI (ENSTMTG00000000593) #28 MBD2 (ENSTMTG00000000580) #29 DCC (ENSTMTG00000000292) MEX3C (ENSTMTG00000000104) SMAD4 (ENSTMTG00000000068) ELAC1 (ENSTMTG00000000045) ME2 (ENSTMTG00000001747) MAPK4 (ENSTMTG00000001722) ENSTMTG00000001717 ENSTMTG00000001712 ENSTMTG00000001700 ENSTMTG00000001691 painted turtle MODERN SPECIES 15 ERMP1 (ENSCPBG00000025490) ENSCPBG00000025492 ENSCPBG00000025493 FRMD3 (ENSCPBG00000025494) IDNK (ENSCPBG00000025495) UBQLN1 (ENSCPBG00000025496) GKAP1 (ENSCPBG00000025497) KIF27 (ENSCPBG00000025498) ATP8B1 (ENSCPBG00000025509) NARS1 (ENSCPBG00000025555) FECH (ENSCPBG00000025557) ONECUT2 (ENSCPBG00000025558) ST8SIA3 (ENSCPBG00000025559) WDR7 (ENSCPBG00000025566) TXNL1 (ENSCPBG00000025577) TCF4 (ENSCPBG00000025587) #22 CCDC68 (ENSCPBG00000025595) #23 RAB27B (ENSCPBG00000025596) #24 ENSCPBG00000025600 C18orf54 (ENSCPBG00000025602) #26 POLI (ENSCPBG00000025603) #28 ENSCPBG00000025604 MBD2 (ENSCPBG00000025606) #29 DCC (ENSCPBG00000025608) MEX3C (ENSCPBG00000025611) SMAD4 (ENSCPBG00000025612) ELAC1 (ENSCPBG00000025613) ME2 (ENSCPBG00000025614) MAPK4 (ENSCPBG00000025615) ENSCPBG00000025618 ENSCPBG00000025620 Testudinidae ANCESTRAL SPECIES 30 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00940000157449 #24 ENSGT00390000008823 #26 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT01030000234969 ENSGT00940000166139 ENSGT00940000164634 ENSGT01030000235140 ENSGT00940000155402.a.b Goode s thornscrub tortoise MODERN SPECIES 20 GRP (ENSGEVG00005014426) SEC11C (ENSGEVG00005014458) ENSGEVG00005014492 ZNF532 (ENSGEVG00005014691) MALT1 (ENSGEVG00005014969) ENSGEVG00005015007 NEDD4L (ENSGEVG00005015391) ENSGEVG00005016959 ATP8B1 (ENSGEVG00005017024) NARS1 (ENSGEVG00005017281) FECH (ENSGEVG00005017318) ONECUT2 (ENSGEVG00005017340) ST8SIA3 (ENSGEVG00005017359) WDR7 (ENSGEVG00005017398) TXNL1 (ENSGEVG00005017445) TCF4 (ENSGEVG00005017791) #22 RAB27B (ENSGEVG00005019432) #24 C18orf54 (ENSGEVG00005019438) #26 POLI (ENSGEVG00005019445) #28 MBD2 (ENSGEVG00005019458) #29 ENSGEVG00005019471 DCC (ENSGEVG00005019491) MEX3C (ENSGEVG00005019557) SMAD4 (ENSGEVG00005019562) ELAC1 (ENSGEVG00005019575) ME2 (ENSGEVG00005019582) MAPK4 (ENSGEVG00005019610) ENSGEVG00005019617 ENSGEVG00005019631 ENSGEVG00005019638 MYO5B (ENSGEVG00005019665) Abingdon island giant tortoise MODERN SPECIES 693 ENSCABG00000021503 #22 ENSCABG00000021506 Lepidosauria ANCESTRAL SPECIES 1 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973.h ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 tuatara DUPLICATION tuatara MODERN SPECIES 855 ENSSPUG00000015969 ATP8B1 (ENSSPUG00000015939) NARS1 (ENSSPUG00000015915) FECH (ENSSPUG00000015893) ST8SIA3 (ENSSPUG00000015873) ENSSPUG00000015867 ENSSPUG00000015859 TXNL1 (ENSSPUG00000015852) ENSSPUG00000015843 #22 ENSSPUG00000015733 #22 tuatara MODERN SPECIES 855 ENSSPUG00000015969 ATP8B1 (ENSSPUG00000015939) NARS1 (ENSSPUG00000015915) FECH (ENSSPUG00000015893) ST8SIA3 (ENSSPUG00000015873) ENSSPUG00000015867 ENSSPUG00000015859 TXNL1 (ENSSPUG00000015852) ENSSPUG00000015843 #22 ENSSPUG00000015733 #22 Episquamata ANCESTRAL SPECIES 6 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973.h ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 Laterata ANCESTRAL SPECIES 8 ENSGT00940000162144 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973.h ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT00940000166139 ENSGT00940000164634 Common wall lizard MODERN SPECIES 2 SEC11C (ENSPMRG00000010988) ENSPMRG00000010975 ZNF532 (ENSPMRG00000010968) MALT1 (ENSPMRG00000010958) ALPK2 (ENSPMRG00000010939) ENSPMRG00000010931 NEDD4L (ENSPMRG00000010848) ENSPMRG00000010813 ENSPMRG00000010793 NARS1 (ENSPMRG00000010785) FECH (ENSPMRG00000010778) ONECUT2 (ENSPMRG00000010772) ST8SIA3 (ENSPMRG00000010766) WDR7 (ENSPMRG00000010716) TXNL1 (ENSPMRG00000010692) TCF4 (ENSPMRG00000010643) #22 CCDC68 (ENSPMRG00000010618) #23 RAB27B (ENSPMRG00000010608) #24 ENSPMRG00000010597 C18orf54 (ENSPMRG00000010588) #26 STARD6 (ENSPMRG00000010581) #27 POLI (ENSPMRG00000010577) #28 MBD2 (ENSPMRG00000010558) #29 ENSPMRG00000010553 DCC (ENSPMRG00000010220) MEX3C (ENSPMRG00000010170) SMAD4 (ENSPMRG00000010161) ELAC1 (ENSPMRG00000010152) ME2 (ENSPMRG00000010147) MAPK4 (ENSPMRG00000010141) ENSPMRG00000010136 Argentine black and white tegu MODERN SPECIES 34 ENSSMRG00000016441 GRP (ENSSMRG00000016442) SEC11C (ENSSMRG00000016444) ZNF532 (ENSSMRG00000016445) MALT1 (ENSSMRG00000016446) NEDD4L (ENSSMRG00000016457) ATP8B1 (ENSSMRG00000016466) NARS1 (ENSSMRG00000016468) FECH (ENSSMRG00000016469) ONECUT2 (ENSSMRG00000016470) ST8SIA3 (ENSSMRG00000016471) ENSSMRG00000016473 WDR7 (ENSSMRG00000016474) TXNL1 (ENSSMRG00000016477) ENSSMRG00000016478 TCF4 (ENSSMRG00000016480) #22 ENSSMRG00000016495 CCDC68 (ENSSMRG00000016500) #23 RAB27B (ENSSMRG00000016503) #24 C18orf54 (ENSSMRG00000016505) #26 STARD6 (ENSSMRG00000016506) #27 ENSSMRG00000016508 POLI (ENSSMRG00000016509) #28 MBD2 (ENSSMRG00000016511) #29 DCC (ENSSMRG00000016526) ENSSMRG00000016529 MEX3C (ENSSMRG00000016531) SMAD4 (ENSSMRG00000016533) ELAC1 (ENSSMRG00000016541) ME2 (ENSSMRG00000016542) MAPK4 (ENSSMRG00000016550) Toxicofera ANCESTRAL SPECIES 18 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973.h ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 ENSGT01030000234969 ENSGT00940000166139 Elapidae ANCESTRAL SPECIES 19 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000157449 #24 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973.h ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850.i ENSGT01030000234969 ENSGT00940000164634 ENSGT01030000235140 ENSGT00940000155402.a.b Indian cobra DUPLICATION Indian cobra MODERN SPECIES 1 ENSNNAG00000014834 SEC11C (ENSNNAG00000014844) ENSNNAG00000014870 ZNF532 (ENSNNAG00000014938) MALT1 (ENSNNAG00000015381) ENSNNAG00000015488 NEDD4L (ENSNNAG00000015704) ATP8B1 (ENSNNAG00000007463) NARS1 (ENSNNAG00000007667) FECH (ENSNNAG00000008818) ONECUT2 (ENSNNAG00000008882) ST8SIA3 (ENSNNAG00000008903) WDR7 (ENSNNAG00000009085) TXNL1 (ENSNNAG00000011691) ENSNNAG00000011735 #22 ENSNNAG00000011771 #22 RAB27B (ENSNNAG00000012352) #24 C18orf54 (ENSNNAG00000012379) #26 STARD6 (ENSNNAG00000012457) #27 POLI (ENSNNAG00000012495) #28 MBD2 (ENSNNAG00000012567) #29 DCC (ENSNNAG00000012608) ENSNNAG00000013210 MEX3C (ENSNNAG00000013225) SMAD4 (ENSNNAG00000013239) ELAC1 (ENSNNAG00000013355) ME2 (ENSNNAG00000013386) MAPK4 (ENSNNAG00000013604) ENSNNAG00000013618 ENSNNAG00000013628 ENSNNAG00000013638 Indian cobra MODERN SPECIES 1 ENSNNAG00000014804 ENSNNAG00000014834 SEC11C (ENSNNAG00000014844) ENSNNAG00000014870 ZNF532 (ENSNNAG00000014938) MALT1 (ENSNNAG00000015381) ENSNNAG00000015488 NEDD4L (ENSNNAG00000015704) ATP8B1 (ENSNNAG00000007463) NARS1 (ENSNNAG00000007667) FECH (ENSNNAG00000008818) ONECUT2 (ENSNNAG00000008882) ST8SIA3 (ENSNNAG00000008903) WDR7 (ENSNNAG00000009085) TXNL1 (ENSNNAG00000011691) ENSNNAG00000011735 #22 ENSNNAG00000011771 #22 RAB27B (ENSNNAG00000012352) #24 C18orf54 (ENSNNAG00000012379) #26 STARD6 (ENSNNAG00000012457) #27 POLI (ENSNNAG00000012495) #28 MBD2 (ENSNNAG00000012567) #29 DCC (ENSNNAG00000012608) ENSNNAG00000013210 MEX3C (ENSNNAG00000013225) SMAD4 (ENSNNAG00000013239) ELAC1 (ENSNNAG00000013355) ME2 (ENSNNAG00000013386) MAPK4 (ENSNNAG00000013604) ENSNNAG00000013618 ENSNNAG00000013628 Elapidae_a ANCESTRAL SPECIES 24 ENSGT00940000167708 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000157449 #24 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973.h ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850.i ENSGT01030000234969 ENSGT00940000164634 ENSGT01030000235140 ENSGT00940000155402.a.b Blue-lipped sea krait MODERN SPECIES 7643 TCF4 (ENSLLTG00000008692) #22 Acanthophiinae ANCESTRAL SPECIES 24 ENSGT00940000167708 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000157449 #24 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973.h ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850.i ENSGT01030000234969 ENSGT00940000164634 ENSGT01030000235140 ENSGT00940000155402.a.b Eastern brown snake MODERN SPECIES 2 CCBE1 (ENSPTXG00000017864) LMAN1 (ENSPTXG00000017862) CPLX4 (ENSPTXG00000017861) ENSPTXG00000017859 SEC11C (ENSPTXG00000017857) ZNF532 (ENSPTXG00000017855) MALT1 (ENSPTXG00000017849) NEDD4L (ENSPTXG00000017848) ATP8B1 (ENSPTXG00000017843) NARS1 (ENSPTXG00000017839) FECH (ENSPTXG00000017838) ST8SIA3 (ENSPTXG00000017837) WDR7 (ENSPTXG00000017836) TXNL1 (ENSPTXG00000017835) ENSPTXG00000017834 TCF4 (ENSPTXG00000017832) #22 RAB27B (ENSPTXG00000017831) #24 C18orf54 (ENSPTXG00000017830) #26 ENSPTXG00000017829 POLI (ENSPTXG00000017828) #28 MBD2 (ENSPTXG00000017827) #29 DCC (ENSPTXG00000017825) MEX3C (ENSPTXG00000017824) SMAD4 (ENSPTXG00000017823) ELAC1 (ENSPTXG00000017822) ME2 (ENSPTXG00000017821) MAPK4 (ENSPTXG00000017820) ENSPTXG00000017819 ENSPTXG00000017818 ENSPTXG00000017817 MYO5B (ENSPTXG00000006873) Mainland tiger snake MODERN SPECIES 15 CPLX4 (ENSNSUG00000014412) ENSNSUG00000014411 GRP (ENSNSUG00000014410) SEC11C (ENSNSUG00000014409) ZNF532 (ENSNSUG00000014297) MALT1 (ENSNSUG00000014296) ENSNSUG00000014295 NEDD4L (ENSNSUG00000013749) ATP8B1 (ENSNSUG00000013746) NARS1 (ENSNSUG00000013209) FECH (ENSNSUG00000013208) ONECUT2 (ENSNSUG00000013207) ST8SIA3 (ENSNSUG00000013206) WDR7 (ENSNSUG00000013204) TXNL1 (ENSNSUG00000013203) TCF4 (ENSNSUG00000013120) #22 RAB27B (ENSNSUG00000013116) #24 C18orf54 (ENSNSUG00000013115) #26 STARD6 (ENSNSUG00000013114) #27 POLI (ENSNSUG00000013113) #28 MBD2 (ENSNSUG00000013112) #29 ENSNSUG00000013111 DCC (ENSNSUG00000013107) MEX3C (ENSNSUG00000013103) SMAD4 (ENSNSUG00000013101) ELAC1 (ENSNSUG00000013099) ME2 (ENSNSUG00000013096) MAPK4 (ENSNSUG00000013095) ENSNSUG00000013094 ENSNSUG00000013093 ENSNSUG00000013092 Lizard MODERN SPECIES 827 MALT1 (ENSACAG00000010025) ALPK2 (ENSACAG00000010018) ENSACAG00000038643 ENSACAG00000038658 NEDD4L (ENSACAG00000009877) ATP8B1 (ENSACAG00000009654) NARS1 (ENSACAG00000009539) FECH (ENSACAG00000009424) ONECUT2 (ENSACAG00000009410) ST8SIA3 (ENSACAG00000009347) WDR7 (ENSACAG00000009169) TXNL1 (ENSACAG00000009121) ENSACAG00000028679 TCF4 (ENSACAG00000008863) #22 CCDC68 (ENSACAG00000008853) #23 RAB27B (ENSACAG00000008824) #24 ENSACAG00000043461 C18orf54 (ENSACAG00000008812) #26 STARD6 (ENSACAG00000008796) #27 POLI (ENSACAG00000008756) #28 MBD2 (ENSACAG00000008739) #29 Anura ANCESTRAL SPECIES 61 ENSGT00950000182938.b.b.b.b.b.b ENSGT00940000167708 ENSGT00940000154470.a ENSGT00390000015600.c.b ENSGT00530000063340 ENSGT00940000154437 ENSGT00390000018044.b.a ENSGT00940000156873 ENSGT00940000158002 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E ENSGT00940000155301 ENSGT00940000156170.h ENSGT00940000159129 #22 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b Frog MODERN SPECIES rax (ENSXETG00000021154) grp (ENSXETG00000021153) sec11c (ENSXETG00000027226) ENSXETG00000031358 znf532 (ENSXETG00000021148) malt1 (ENSXETG00000021146) nedd4l (ENSXETG00000021142) ENSXETG00000043350 atp8b1 (ENSXETG00000020878) nars1 (ENSXETG00000027170) fech (ENSXETG00000020888) onecut2 (ENSXETG00000036150) st8sia3 (ENSXETG00000042677) wdr7 (ENSXETG00000020898) txnl1 (ENSXETG00000020901) tcf4 (ENSXETG00000019086) #22 ccdc68 (ENSXETG00000015630) #23 rab27b (ENSXETG00000003366) #24 ENSXETG00000037162 XB5953480 [provisional] (ENSXETG00000039540) ENSXETG00000013698 #26 stard6 (ENSXETG00000013697) #27 poli (ENSXETG00000029947) #28 mbd2 (ENSXETG00000013688) #29 ENSXETG00000043434 ENSXETG00000047222 ENSXETG00000045471 dcc (ENSXETG00000030451) ENSXETG00000040910 ENSXETG00000047581 ENSXETG00000046887 Leishan spiny toad MODERN SPECIES MALT1 (ENSLLEG00000001605) ENSLLEG00000001730 ENSLLEG00000001746 NEDD4L (ENSLLEG00000001804) ENSLLEG00000001975 ATP8B1 (ENSLLEG00000002029) NARS1 (ENSLLEG00000002322) ENSLLEG00000002848 ENSLLEG00000002856 ENSLLEG00000002866 ST8SIA3 (ENSLLEG00000002873) ONECUT2 (ENSLLEG00000002890) FECH (ENSLLEG00000002914) TXNL1 (ENSLLEG00000002969) ENSLLEG00000002982 TCF4 (ENSLLEG00000003022) #22 ENSLLEG00000003146 #23 ENSLLEG00000003191 TRIM23 (ENSLLEG00000003247) PPWD1 (ENSLLEG00000003413) TRAPPC13 (ENSLLEG00000003508) SHLD3 (ENSLLEG00000003714) ENSLLEG00000003722 SGTB (ENSLLEG00000003730) NLN (ENSLLEG00000003745) ENSLLEG00000003769 ERBIN (ENSLLEG00000003789) SREK1 (ENSLLEG00000003835) ENSLLEG00000003847 ENSLLEG00000003859 ENSLLEG00000003865 Coelacanth MODERN SPECIES 438 TCF4 (ENSLACG00000003485) #22 ENSLACG00000003513 CCDC68 (ENSLACG00000012752) #23 RAB27B (ENSLACG00000013259) #24 ENSLACG00000015385 C18orf54 (ENSLACG00000015539) #26 POLI (ENSLACG00000015774) #28 MBD2 (ENSLACG00000016038) #29 Actinopterygii ANCESTRAL SPECIES 86 ENSGT00390000014907.B ENSGT00940000159146 ENSGT00950000182938.b.b.b.b.b.b ENSGT00940000166467 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000001566 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000160973 ENSGT00940000157435 ENSGT00730000111224 ENSGT00950000183134.c.b ENSGT00940000159850 Reedfish MODERN SPECIES 13 cplx4b (ENSECRG00000003038) rx3 (ENSECRG00000003062) GRP (ENSECRG00000003088) ZNF532 (ENSECRG00000003098) ENSECRG00000003118 MALT1 (ENSECRG00000003156) NEDD4L (ENSECRG00000003220) ATP8B1 (ENSECRG00000003310) WDR7 (ENSECRG00000003388) ENSECRG00000003584 st8sia3 (ENSECRG00000003676) ONECUT2 (ENSECRG00000003685) fech (ENSECRG00000003700) NARS1 (ENSECRG00000003734) txnl1 (ENSECRG00000003762) TCF4 (ENSECRG00000003811) #22 ENSECRG00000003876 RAB27B (ENSECRG00000003908) #24 wdr91 (ENSECRG00000003974) C18orf54 (ENSECRG00000004065) #26 STARD6 (ENSECRG00000004077) #27 poli (ENSECRG00000004087) #28 MBD2 (ENSECRG00000004098) #29 dcc (ENSECRG00000004113) MEX3C (ENSECRG00000004141) smad4a (ENSECRG00000004156) elac1 (ENSECRG00000004177) me2 (ENSECRG00000004188) MAPK4 (ENSECRG00000004206) MAPK4 (ENSECRG00000004217) ENSECRG00000004226 Neopterygii ANCESTRAL SPECIES 36 ENSGT00390000007731 ENSGT00390000013339 ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423 ENSGT00390000010767 ENSGT00940000158002 ENSGT00940000155301 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00950000183065.C #23 ENSGT00940000157449 #24 ENSGT00390000001566 ENSGT00390000003755 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00940000165922 ENSGT00940000159383 Spotted gar MODERN SPECIES 658 zgc:158260 (ENSLOCG00000003868) CCDC158 (ENSLOCG00000003834) SHROOM3 (ENSLOCG00000003809) ENSLOCG00000003796 ccni (ENSLOCG00000003779) ccng2 (ENSLOCG00000003764) ENSLOCG00000003731 ATP8B1 (ENSLOCG00000003720) ENSLOCG00000003704 WDR7 (ENSLOCG00000003671) st8sia3 (ENSLOCG00000003658) ONECUT2 (ENSLOCG00000003635) fech (ENSLOCG00000003614) NARS1 (ENSLOCG00000003598) txnl1 (ENSLOCG00000003581) TCF4 (ENSLOCG00000003538) #22 ENSLOCG00000003529 CCDC68 (ENSLOCG00000003517) #23 RAB27B (ENSLOCG00000003498) #24 wdr91 (ENSLOCG00000003472) ENSLOCG00000003458 C18orf54 (ENSLOCG00000003429) #26 STARD6 (ENSLOCG00000003412) #27 poli (ENSLOCG00000003386) #28 mbd2 (ENSLOCG00000003370) #29 dcc (ENSLOCG00000003319) TRABD2A (ENSLOCG00000003298) HOOK3 (ENSLOCG00000003264) rnf170 (ENSLOCG00000003248) june (ENSLOCG00000017968) THAP1 (ENSLOCG00000003237) Osteoglossocephalai ANCESTRAL SPECIES 11 ENSGT00940000153372.A.e.a.a ENSGT00390000007731 ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000158002 ENSGT00940000155301 ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449 #24 ENSGT00390000001566 ENSGT00390000008823 #26 ENSGT00940000161788 #27 ENSGT00940000159487 #28 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000007109 ENSGT00940000158840 Osteoglossiformes ANCESTRAL SPECIES 80 ENSGT01030000235124 ENSGT00940000153372.A.e.a.a ENSGT00940000175255 ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000158002 ENSGT00940000155301 ENSGT01030000234535.E.c ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E.c ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449 #24 ENSGT00390000001566 ENSGT00390000008823 #26 Asian bonytongue MODERN SPECIES 21 ENSSFOG00015032900 SCARB2 (ENSSFOG00015021550) ENSSFOG00015030807 SHROOM3 (ENSSFOG00015021515) ENSSFOG00015024699 ccni (ENSSFOG00015028430) ccng2 (ENSSFOG00015021488) ENSSFOG00015021459 ATP8B1 (ENSSFOG00015021364) WDR7 (ENSSFOG00015021222) ST8SIA3 (ENSSFOG00015031435) ONECUT2 (ENSSFOG00015033040) fech (ENSSFOG00015021142) NARS1 (ENSSFOG00015021120) txnl1 (ENSSFOG00015021107) TCF4 (ENSSFOG00015021047) #22 ENSSFOG00015021006 RAB27B (ENSSFOG00015020985) #24 wdr91 (ENSSFOG00015020923) zgc:152948 (ENSSFOG00015020877) #26 DCC (ENSSFOG00015020828) mbd2 (ENSSFOG00015020812) #29 UNC5C (ENSSFOG00015020763) ENSSFOG00015020711 pdlim5b (ENSSFOG00015020683) opn4xa (ENSSFOG00015020429) EGFLAM (ENSSFOG00015020623) GDNF (ENSSFOG00015020615) WDR70 (ENSSFOG00015020571) ENSSFOG00015020522 ENSSFOG00015020507 P. kingsleyae MODERN SPECIES 129 ENSPKIG00000014981 ENSPKIG00000015028 ENSPKIG00000015052 cox5ba (ENSPKIG00000015071) npy8ar (ENSPKIG00000015090) marchf5l (ENSPKIG00000015119) ENSPKIG00000015151 actr1b (ENSPKIG00000015184) kctd9b (ENSPKIG00000015238) FGFR1 (ENSPKIG00000015297) LGI3 (ENSPKIG00000015401) TCF4 (ENSPKIG00000015474) #22 RAB27B (ENSPKIG00000015589) #24 wdr91 (ENSPKIG00000015624) ENSPKIG00000015668 DEPDC1B (ENSPKIG00000015689) mbd2 (ENSPKIG00000015756) #29 ENSPKIG00000015812 MCC (ENSPKIG00000015886) YTHDC2 (ENSPKIG00000016010) FASTKD5 (ENSPKIG00000016079) LZTS3 (ENSPKIG00000016094) ENSPKIG00000016108 ENSPKIG00000016121 sprb (ENSPKIG00000016133) smyd1a (ENSPKIG00000016159) thnsl2 (ENSPKIG00000016221) Clupeocephala ANCESTRAL SPECIES 54 ENSGT00940000153372.A.e.a.a ENSGT00390000007731 ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000158002 ENSGT00940000155301 ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449 #24 ENSGT00390000001566 ENSGT00390000008823 #26 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00940000165922 ENSGT00940000159383 ENSGT00940000158840 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000172372 Euteleosteomorpha ANCESTRAL SPECIES 27 ENSGT00940000153372.A.e.a.a ENSGT00390000007731 ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000158002 ENSGT00940000155301 ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT00390000001566 ENSGT00390000008823 #26 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00940000165922 ENSGT00940000159383 ENSGT00940000158840 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000172372 Protacanthopterygii ANCESTRAL SPECIES 150 ENSGT01030000235124 ENSGT00940000153372.A.e.a.a ENSGT00390000007731 ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000158002 ENSGT00940000155301 ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT00390000001566 ENSGT00390000008823 #26 ENSGT00950000183005.a.b #29 ENSGT00940000158867 ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00940000165922 ENSGT00940000159383 ENSGT00940000158840 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000157979 Northern pike MODERN SPECIES 22 ENSELUG00000015857 SHROOM3 (ENSELUG00000001068) ENSELUG00000001347 ccni (ENSELUG00000015786) ccng2 (ENSELUG00000015768) ENSELUG00000015736 ATP8B1 (ENSELUG00000015686) WDR7 (ENSELUG00000015534) ENSELUG00000000565 st8sia3 (ENSELUG00000015395) ONECUT2 (ENSELUG00000015365) fech (ENSELUG00000015348) ENSELUG00000032637 NARS1 (ENSELUG00000015334) txnl1 (ENSELUG00000015259) TCF4 (ENSELUG00000015197) #22 ENSELUG00000015047 RAB27B (ENSELUG00000015022) #24 C18orf54 (ENSELUG00000014771) #26 wdr91 (ENSELUG00000014939) ENSELUG00000029650 dcc (ENSELUG00000014722) ENSELUG00000014663 ENSELUG00000031865 ENSELUG00000032088 ENSELUG00000014639 ENSELUG00000014602 TRABD2A (ENSELUG00000014592) HOOK3 (ENSELUG00000014549) rnf170 (ENSELUG00000027381) june (ENSELUG00000014455) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 804 ENSGT01030000234618.E.f.b ENSGT00940000156170.n ENSGT00940000159129.u.a #22 ENSGT00940000167600.d ENSGT00940000157449.a.a #24 ENSGT00390000001566.f ENSGT00390000008823 #26 ENSGT00950000183005.a.b.f #29 ENSGT00940000158867.d Salmoninae_a ANCESTRAL SPECIES 123 ENSGT01030000234618.E.f.b ENSGT00940000156170.n ENSGT00940000159129.u.a #22 ENSGT00940000167600.d ENSGT00940000157449.a.a #24 ENSGT00390000001566.f ENSGT00390000008823 #26 ENSGT00950000183005.a.b.f #29 ENSGT00940000158867.d ENSGT00940000165000.b.a ENSGT00940000158075.w.a ENSGT00390000017123.b.a.b ENSGT00940000165922.c ENSGT01050000244898.a.a.a.a.l ENSGT00940000158840.o.b ENSGT00390000007109 ENSGT00940000157979.n ENSGT00940000153212.v Oncorhynchus ANCESTRAL SPECIES 47 ENSGT00940000164588.f.b ENSGT00940000153372.A.e.a.b.b.a ENSGT01030000235124 ENSGT00940000153372.A.e.a.a.d ENSGT00390000007731.a ENSGT00940000157778.r ENSGT00940000157778.q.b ENSGT00950000183003.a.a.a.a.a.d ENSGT00940000154827.db ENSGT00940000156423.j.c ENSGT00390000010767 ENSGT00940000158002.j ENSGT01030000234618.E.f.a.b.a ENSGT00940000156170.m.b ENSGT00940000155047.bc ENSGT00940000159129.u.a #22 ENSGT00940000167600.d ENSGT00940000157449.a.a #24 ENSGT00390000001566.f ENSGT00390000008823 #26 ENSGT00940000158867.d ENSGT00940000165000.b.a ENSGT00940000158075.w.a ENSGT00390000017123.b.a.b ENSGT00940000165922.c ENSGT01050000244898.a.a.a.a.l.b ENSGT00940000161621.A.a.b.a ENSGT00940000158840.o.b ENSGT01000000221924 ENSGT00390000007109.o ENSGT00940000157979.n Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 3 galt (ENSOMYG00000005968) sigmar1 (ENSOMYG00000005828) katnal2 (ENSOMYG00000065578) hdhd2 (ENSOMYG00000005779) skor2 (ENSOMYG00000059761) ENSOMYG00000009895 ENSOMYG00000009881 ENSOMYG00000076084 ENSOMYG00000070940 #22 ENSOMYG00000056532 #22 ENSOMYG00000009943 ENSOMYG00000009995 ENSOMYG00000068004 ENSOMYG00000048046 ENSOMYG00000071656 ENSOMYG00000057588 ENSOMYG00000005485 ENSOMYG00000005513 ENSOMYG00000027190 ENSOMYG00000058625 ENSOMYG00000005610 ENSOMYG00000064993 ENSOMYG00000052622 ENSOMYG00000005702 Rainbow trout MODERN SPECIES 3 galt (ENSOMYG00000005968) sigmar1 (ENSOMYG00000005828) katnal2 (ENSOMYG00000065578) hdhd2 (ENSOMYG00000005779) skor2 (ENSOMYG00000059761) ENSOMYG00000009895 ENSOMYG00000009881 ENSOMYG00000076084 ENSOMYG00000070940 #22 ENSOMYG00000056532 #22 ENSOMYG00000009943 ENSOMYG00000009995 ENSOMYG00000068004 ENSOMYG00000048046 ENSOMYG00000071656 ENSOMYG00000057588 ENSOMYG00000005485 ENSOMYG00000005513 ENSOMYG00000027190 ENSOMYG00000058625 ENSOMYG00000005610 ENSOMYG00000064993 ENSOMYG00000052622 ENSOMYG00000005702 ENSOMYG00000063106 Oncorhynchus_a ANCESTRAL SPECIES 48 ENSGT01100000263568.b.b ENSGT00940000157583.l ENSGT00390000010355 ENSGT00940000164588.f.b ENSGT00940000153372.A.e.a.b.b.a ENSGT01030000235124 ENSGT00940000153372.A.e.a.a.d ENSGT00390000007731.a ENSGT00940000157778.r ENSGT00940000157778.q.b ENSGT00950000183003.a.a.a.a.a.d ENSGT00940000154827.db ENSGT00940000156423.j.c ENSGT00390000010767 ENSGT00940000158002.j ENSGT00940000159129.u.a #22 ENSGT00940000167600.d ENSGT00940000157449.a.a #24 ENSGT00390000001566.f ENSGT00390000008823 #26 ENSGT00940000165000.b.a ENSGT00940000158075.w.a ENSGT00940000165922.c ENSGT00940000161621.A.a.b.a ENSGT00940000158840.o.b ENSGT01000000221924 ENSGT00390000007109.o ENSGT00940000157979.n ENSGT00940000153212.v ENSGT00940000155803.n ENSGT00390000013355.z.b Coho salmon MODERN SPECIES 26 ENSOKIG00005005995 SHROOM3 (ENSOKIG00005005971) ENSOKIG00005005940 ccni (ENSOKIG00005005923) ccng2 (ENSOKIG00005005913) ENSOKIG00005005885 ATP8B1 (ENSOKIG00005003667) ENSOKIG00005003490 ENSOKIG00005003486 ST8SIA3 (ENSOKIG00005003484) ENSOKIG00005003477 ONECUT2 (ENSOKIG00005003474) txnl1 (ENSOKIG00005003448) NARS1 (ENSOKIG00005003126) ENSOKIG00005003052 TCF4 (ENSOKIG00005001724) #22 ENSOKIG00005001584 RAB27B (ENSOKIG00005001574) #24 wdr91 (ENSOKIG00005001545) ENSOKIG00005001530 #26 ENSOKIG00005001524 ENSOKIG00005001521 #29 ENSOKIG00005001517 dcc (ENSOKIG00005001452) ENSOKIG00005001412 trabd2a (ENSOKIG00005001404) HOOK3 (ENSOKIG00005001355) ENSOKIG00005001331 rnf170 (ENSOKIG00005001322) ENSOKIG00005001309 ENSOKIG00005001301 Salmo ANCESTRAL SPECIES 106 ENSGT00990000214267 ENSGT01030000234535.E.d.c.b ENSGT01030000234618.E.f.b ENSGT00940000156170.n ENSGT00940000159129.u.a #22 ENSGT00940000167600.d ENSGT00940000157449.a.a #24 ENSGT00390000001566.f ENSGT00390000008823 #26 ENSGT00950000183005.a.b.f #29 ENSGT00940000158867.d ENSGT00940000165000.b.a ENSGT01100000265301 ENSGT00940000158075.w.a ENSGT00390000017123.b.a.b ENSGT00390000017123.b.a.a.b ENSGT00940000165922.c ENSGT01050000244898.a.a.a.a.l.c ENSGT00940000158840.o.b ENSGT00390000007109 Atlantic salmon MODERN SPECIES 4 SHROOM3 (ENSSSAG00000065990) ENSSSAG00000082739 ENSSSAG00000065994 ccni (ENSSSAG00000065988) ccng2 (ENSSSAG00000082396) ENSSSAG00000066005 ENSSSAG00000066100 ENSSSAG00000111475 ENSSSAG00000120592 ENSSSAG00000069727 ST8SIA3 (ENSSSAG00000041294) ENSSSAG00000105740 ONECUT2 (ENSSSAG00000069743) NARS1 (ENSSSAG00000096197) txnl1 (ENSSSAG00000070982) TCF4 (ENSSSAG00000113835) #22 ENSSSAG00000116476 ENSSSAG00000071032 RAB27B (ENSSSAG00000046717) #24 wdr91 (ENSSSAG00000071071) ENSSSAG00000120444 cssa13h18orf54 (ENSSSAG00000071056) #26 ENSSSAG00000107541 #29 dcc (ENSSSAG00000095905) ENSSSAG00000085872 ENSSSAG00000108040 ENSSSAG00000071145 rnf170 (ENSSSAG00000114922) june (ENSSSAG00000072110) ENSSSAG00000087039 ENSSSAG00000072071 River trout MODERN SPECIES 6 ENSSTUG00000024742 ENSSTUG00000024738 st8sia3 (ENSSTUG00000024730) ONECUT2 (ENSSTUG00000024719) NARS1 (ENSSTUG00000022490) txnl1 (ENSSTUG00000022430) ENSSTUG00000022426 TCF4 (ENSSTUG00000022405) #22 ENSSTUG00000022369 RAB27B (ENSSTUG00000022328) #24 ENSSTUG00000022319 wdr91 (ENSSTUG00000022088) C18orf54 (ENSSTUG00000022070) #26 mbd2 (ENSSTUG00000022049) #29 ENSSTUG00000022043 ENSSTUG00000022031 dcc (ENSSTUG00000019806) ENSSTUG00000019711 trabd2a (ENSSTUG00000019691) HOOK3 (ENSSTUG00000019544) rnf170 (ENSSTUG00000019518) june (ENSSTUG00000019511) ENSSTUG00000019495 Huchen MODERN SPECIES 6230 ENSHHUG00000019400 #22 Salmoninae ANCESTRAL SPECIES 536 ENSGT00940000153372.A.e.a.a.d ENSGT00390000007731 ENSGT00940000157778.r ENSGT00940000157778.q.b ENSGT00950000183003.a.a.a.a.a.d ENSGT00940000154827.db ENSGT00940000156423.j.c ENSGT00390000010767 ENSGT00940000158002.j ENSGT00940000155301.c.a ENSGT01030000234535.E.d.c ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E.f.a.b.b ENSGT00940000156170.m ENSGT00940000159129.u.b #22 Huchen MODERN SPECIES 6360 ENSHHUG00000024147 #22 Salmoninae_a ANCESTRAL SPECIES 57 ENSGT00940000153372.A.e.a.a.d ENSGT00390000007731.a ENSGT00940000157778.r ENSGT00940000157778.q.b ENSGT00950000183003.a.a.a.a.a.d ENSGT00940000154827.db ENSGT00940000156423.j.c ENSGT00390000010767 ENSGT00940000158002.j ENSGT00940000155301.c.a ENSGT01030000234535.E.d.d.b ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E.f.a.b.b ENSGT00940000156170.m ENSGT00940000159129.u.b #22 ENSGT00940000167600.c ENSGT00940000157449.a.b #24 ENSGT00390000001566.e ENSGT00950000183005.a.b.e.b #29 ENSGT00940000158867.c ENSGT00940000165000.b.b ENSGT00940000158075.x ENSGT00940000162805 ENSGT00940000158075.w.b ENSGT00390000017123.b.a.a.a ENSGT00940000165922.d ENSGT00940000159383 ENSGT00940000172372.b ENSGT00940000157979.m.a.a ENSGT00390000014471 Oncorhynchus ANCESTRAL SPECIES 102 ENSGT00950000183103.d.a.b.o.b ENSGT00390000016258 ENSGT01030000234618.E.f.a.b.b ENSGT00940000156170.m.a ENSGT00940000159129.u.b #22 ENSGT00940000167600.c ENSGT00940000157449.a.b #24 ENSGT00390000001566.e ENSGT00950000183005.a.b.e.b #29 ENSGT00940000158867.c ENSGT00940000158075.w.b ENSGT00390000017123.b.a.a.b ENSGT01100000264204 ENSGT00940000165922.d ENSGT00940000159383 ENSGT01050000244898.a.a.a.a.l.a ENSGT00940000161278 ENSGT00940000157979.m.b ENSGT00390000014471 ENSGT00940000155803.m Rainbow trout MODERN SPECIES 26 ENSOMYG00000055588 ENSOMYG00000062297 ENSOMYG00000066330 ENSOMYG00000029533 ENSOMYG00000029568 ENSOMYG00000058987 ENSOMYG00000049447 ENSOMYG00000075323 ENSOMYG00000063453 ENSOMYG00000076884 ENSOMYG00000073768 ONECUT2 (ENSOMYG00000030633) ENSOMYG00000030623 NARS1 (ENSOMYG00000030143) TXNL1 (ENSOMYG00000029786) ENSOMYG00000071641 #22 ENSOMYG00000076144 ENSOMYG00000052915 RAB27B (ENSOMYG00000029687) #24 ENSOMYG00000029704 ENSOMYG00000059942 #29 ENSOMYG00000061158 ENSOMYG00000049648 ENSOMYG00000030645 ENSOMYG00000000176 ENSOMYG00000076990 ENSOMYG00000069759 ENSOMYG00000000285 CCNI (ENSOMYG00000068005) ccng2 (ENSOMYG00000000308) ENSOMYG00000000316 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000159129.u.b #22 Coho salmon MODERN SPECIES 15 ENSOKIG00005008372 ccni (ENSOKIG00005008393) ccng2 (ENSOKIG00005008437) ATP8B1 (ENSOKIG00005008687) WDR7 (ENSOKIG00005011315) st8sia3 (ENSOKIG00005011540) ENSOKIG00005011554 ENSOKIG00005011559 ENSOKIG00005011576 TXNL1 (ENSOKIG00005011591) NARS1 (ENSOKIG00005011759) fech (ENSOKIG00005013273) ENSOKIG00005013283 ONECUT2 (ENSOKIG00005013288) ENSOKIG00005013293 TCF4 (ENSOKIG00005013328) #22 ENSOKIG00005013657 ENSOKIG00005013661 RAB27B (ENSOKIG00005013676) #24 ENSOKIG00005013702 MBD2 (ENSOKIG00005013715) #29 dcc (ENSOKIG00005013812) ENSOKIG00005014714 ENSOKIG00005014723 ENSOKIG00005014735 ENSOKIG00005014747 ENSOKIG00005014751 ENSOKIG00005014755 trabd2a (ENSOKIG00005014760) ENSOKIG00005014767 ENSOKIG00005014769 Salmo ANCESTRAL SPECIES ENSGT00940000159129.u.b #22 Atlantic salmon MODERN SPECIES SHROOM3 (ENSSSAG00000006144) ENSSSAG00000006162 CCNI (ENSSSAG00000087000) ccng2 (ENSSSAG00000089498) ENSSSAG00000006482 WDR7 (ENSSSAG00000011155) st8sia3 (ENSSSAG00000106294) ONECUT2 (ENSSSAG00000041315) fech (ENSSSAG00000041337) NARS1 (ENSSSAG00000068430) NARS1 (ENSSSAG00000043851) TXNL1 (ENSSSAG00000043763) ENSSSAG00000120677 ENSSSAG00000118768 ENSSSAG00000084729 ENSSSAG00000071044 #22 ENSSSAG00000046635 ENSSSAG00000109035 ENSSSAG00000101383 RAB27B (ENSSSAG00000112970) #24 ENSSSAG00000046684 #29 ENSSSAG00000095626 dcc (ENSSSAG00000071128) ENSSSAG00000086596 ENSSSAG00000071141 HOOK3 (ENSSSAG00000116617) ENSSSAG00000089552 rnf170 (ENSSSAG00000047265) ENSSSAG00000099488 ENSSSAG00000048507 june (ENSSSAG00000109270) Salmoninae ANCESTRAL SPECIES ENSGT00940000159129.v #22 Huchen DUPLICATION Huchen MODERN SPECIES 7125 ENSHHUG00000013710 #22 Huchen MODERN SPECIES 8632 ENSHHUG00000010573 #22 Acanthomorphata ANCESTRAL SPECIES 209 ENSGT00950000182925.B ENSGT00940000168229 ENSGT00940000156081.j ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301 ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000158002 ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 Cod MODERN SPECIES 10 ENSGMOG00000030532 ENSGMOG00000026035 ENSGMOG00000013644 ENSGMOG00000013632 ENSGMOG00000028218 ENSGMOG00000033692 ENSGMOG00000014639 ENSGMOG00000035131 ENSGMOG00000035431 ENSGMOG00000031419 NARS1 (ENSGMOG00000012599) FECH (ENSGMOG00000012605) WDR7 (ENSGMOG00000014743) ENSGMOG00000013413 TXNL1 (ENSGMOG00000010549) TCF4 (ENSGMOG00000018104) #22 RAB27B (ENSGMOG00000018955) #24 ENSGMOG00000029060 ENSGMOG00000033531 ENSGMOG00000014217 vldlr (ENSGMOG00000000577) ENSGMOG00000022861 spp1 (ENSGMOG00000035275) ENSGMOG00000036712 ENSGMOG00000022637 ENSGMOG00000031931 ENSGMOG00000030843 ENSGMOG00000005609 ENSGMOG00000005545 ENSGMOG00000001918 ENSGMOG00000000288 #29 Euacanthomorphacea ANCESTRAL SPECIES 96 ENSGT00940000168229 ENSGT00940000156081.j ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301 ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000158002 ENSGT00940000156170 ENSGT01030000236433 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 Pinecone sodierfish MODERN SPECIES 3 ENSMMDG00005001984 rasgef1bb (ENSMMDG00005001807) antxr2b (ENSMMDG00005001782) paqr3b (ENSMMDG00005001777) slc26a1 (ENSMMDG00005001585) ENSMMDG00005001556 ENSMMDG00005001549 ENSMMDG00005001426 ENSMMDG00005001393 ENSMMDG00005001389 ENSMMDG00005001386 ENSMMDG00005001383 ENSMMDG00005001378 txnl1 (ENSMMDG00005001367) ENSMMDG00005001362 TCF4 (ENSMMDG00005001195) #22 RAB27B (ENSMMDG00005001161) #24 ENSMMDG00005001154 ENSMMDG00005001150 ENSMMDG00005001144 ENSMMDG00005022408 ENSMMDG00005022397 ENSMMDG00005022396 ENSMMDG00005022395 ATP8B1 (ENSMMDG00005019432) NARS1 (ENSMMDG00005016129) ENSMMDG00005016063 fech (ENSMMDG00005016038) ONECUT2 (ENSMMDG00005016035) WDR7 (ENSMMDG00005016013) ENSMMDG00005016007 Percomorphaceae ANCESTRAL SPECIES 77 ENSGT00950000182925.B.b ENSGT00940000168229 ENSGT00940000156081.j ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301 ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000158002 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT00390000000360 ENSGT00960000186749 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 Tiger tail seahorse MODERN SPECIES 431 ONECUT2 (ENSHCOG00000000079) st8sia3 (ENSHCOG00000002854) WDR7 (ENSHCOG00000002907) txnl1 (ENSHCOG00000002944) ATP8B1 (ENSHCOG00000002973) TCF4 (ENSHCOG00000002986) #22 Percomorphaceae_B ANCESTRAL SPECIES 16 ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.a ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.b ENSGT01090000260059.a.b.b.a.a.b.a.a ENSGT00390000000360 ENSGT00960000186749 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e Ovalentaria ANCESTRAL SPECIES 16 ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.a ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.b ENSGT01090000260059.a.b.b.a.a.b.a.a ENSGT00390000000360 ENSGT00960000186749 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460.j ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e Atherinomorphae ANCESTRAL SPECIES 28 ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.a ENSGT00940000155047.bc ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT00390000000360 ENSGT00960000186749 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460.j ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e ENSGT00940000153725.b.c ENSGT00940000156814 Oryzias ANCESTRAL SPECIES 46 ENSGT00940000168229 ENSGT00940000156081.j ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000158002 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT00390000000360 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460.j ENSGT00390000002216 ENSGT00400000024390 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e ENSGT00940000153725.b.c ENSGT00940000156814 ENSGT00940000156804.b ENSGT00940000165107.A Oryzias_b ANCESTRAL SPECIES 59 ENSGT00940000168229 ENSGT00940000156081.j ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000158002 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT00390000000360 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460.j ENSGT00390000002216 ENSGT00400000024390 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e Indian medaka MODERN SPECIES 6 ENSOMEG00000004028 ENSOMEG00000004016 ENSOMEG00000003997 ENSOMEG00000003987 ccni (ENSOMEG00000003977) ccng2 (ENSOMEG00000003968) ENSOMEG00000003952 WDR7 (ENSOMEG00000003933) ENSOMEG00000003905 st8sia3 (ENSOMEG00000003900) ONECUT2 (ENSOMEG00000003896) fech (ENSOMEG00000003885) NARS1 (ENSOMEG00000003858) txnl1 (ENSOMEG00000003815) ATP8B1 (ENSOMEG00000003776) TCF4 (ENSOMEG00000003657) #22 ENSOMEG00000003571 ENSOMEG00000003521 RAB27B (ENSOMEG00000003505) #24 Javanese ricefish MODERN SPECIES 3 ENSOJAG00000011654 ENSOJAG00000010417 ENSOJAG00000010247 ENSOJAG00000010211 ccni (ENSOJAG00000010181) ccng2 (ENSOJAG00000010165) ENSOJAG00000010150 WDR7 (ENSOJAG00000009870) st8sia3 (ENSOJAG00000009823) ONECUT2 (ENSOJAG00000009800) fech (ENSOJAG00000009490) NARS1 (ENSOJAG00000007972) txnl1 (ENSOJAG00000007808) ATP8B1 (ENSOJAG00000007471) ENSOJAG00000007424 TCF4 (ENSOJAG00000006033) #22 ENSOJAG00000005774 ENSOJAG00000005654 ENSOJAG00000005625 RAB27B (ENSOJAG00000005595) #24 BRCC3 (ENSOJAG00000005578) ENSOJAG00000005540 KCNV2 (ENSOJAG00000005505) vldlr (ENSOJAG00000005002) ENSOJAG00000004909 spp1 (ENSOJAG00000004882) htr1ab (ENSOJAG00000004851) ENSOJAG00000004819 niban2a (ENSOJAG00000003652) slc31a2 (ENSOJAG00000003422) ARRDC1 (ENSOJAG00000003335) Oryzias_a ANCESTRAL SPECIES 61 ENSGT00940000156804.b ENSGT00940000156814 ENSGT00940000153725.b.c ENSGT00950000182909.a.e ENSGT00940000154484.B.a.a ENSGT00400000024390 ENSGT00390000002216 ENSGT00940000155460.j ENSGT00940000157438.d ENSGT00390000015757 ENSGT00940000161555 ENSGT00390000000360 ENSGT00940000157449.a #24 ENSGT00940000156170 ENSGT00940000158002 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E.d ENSGT00940000155301.f ENSGT00390000010767 ENSGT00940000156423.j ENSGT00940000154827 ENSGT00950000183003.a.a.a.a.a ENSGT00940000157778 ENSGT00940000156081.j ENSGT00940000168229 ENSGT00950000182925.B.b ENSGT00390000013355 Japanese Medaka HdrR MODERN SPECIES 3 htr1ab (ENSORLG00000028928) ENSORLG00000025138 ENSORLG00000022075 spp1 (ENSORLG00000020900) ENSORLG00000026126 ENSORLG00000014884 ENSORLG00000027615 vldlr (ENSORLG00000014910) ENSORLG00000014918 pum3 (ENSORLG00000014935) ENSORLG00000014951 BRCC3 (ENSORLG00000014956) RAB27B (ENSORLG00000025521) #24 txnl1 (ENSORLG00000015007) ATP8B1 (ENSORLG00000015035) TCF4 (ENSORLG00000015062) #22 ENSORLG00000025564 ENSORLG00000022905 NARS1 (ENSORLG00000015078) ENSORLG00000028790 fech (ENSORLG00000015093) ONECUT2 (ENSORLG00000024727) st8sia3 (ENSORLG00000015106) WDR7 (ENSORLG00000015130) ENSORLG00000030123 ccng2 (ENSORLG00000015153) ccni (ENSORLG00000015175) ENSORLG00000024009 ENSORLG00000015200 ENSORLG00000025695 ENSORLG00000025471 Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 1311 c6 (ENSOSIG00000015854) rnf180b (ENSOSIG00000015839) htr1ab (ENSOSIG00000015838) spp1 (ENSOSIG00000015836) ENSOSIG00000015834 vldlr (ENSOSIG00000003097) KCNV2 (ENSOSIG00000002669) pum3 (ENSOSIG00000001270) ENSOSIG00000017764 BRCC3 (ENSOSIG00000017761) RAB27B (ENSOSIG00000017757) #24 txnl1 (ENSOSIG00000017754) ATP8B1 (ENSOSIG00000017624) ENSOSIG00000017581 ENSOSIG00000017578 #22 ENSOSIG00000017575 #22 NARS1 (ENSOSIG00000014862) fech (ENSOSIG00000014838) Chinese medaka MODERN SPECIES 1311 fech (ENSOSIG00000014838) NARS1 (ENSOSIG00000014862) ENSOSIG00000017575 #22 ENSOSIG00000017578 #22 ENSOSIG00000017581 ATP8B1 (ENSOSIG00000017624) txnl1 (ENSOSIG00000017754) RAB27B (ENSOSIG00000017757) #24 BRCC3 (ENSOSIG00000017761) ENSOSIG00000017764 pum3 (ENSOSIG00000001270) KCNV2 (ENSOSIG00000002669) vldlr (ENSOSIG00000003097) ENSOSIG00000015834 spp1 (ENSOSIG00000015836) htr1ab (ENSOSIG00000015838) rnf180b (ENSOSIG00000015839) c6 (ENSOSIG00000015854) c7b (ENSOSIG00000016465) Cyprinodontiformes ANCESTRAL SPECIES 27 ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.a ENSGT00940000155047.bc ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT00390000000360 ENSGT00960000186749 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460.j ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT01010000222287.B.b.b.b ENSGT00950000182909.a.e ENSGT00940000153725.b.c ENSGT00940000156814 Cyprinodontoidei ANCESTRAL SPECIES 33 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000012710.a.a ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00940000170723 ENSGT00950000183005.a.b #29 ENSGT00940000153832.j ENSGT00940000153832.k ENSGT00940000158867 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.a ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT00940000156170 ENSGT01090000260059.a.b.b.a.a.b.a.a ENSGT01090000259997.a.d.a.a.b.d ENSGT01030000234618.E ENSGT00950000182925.B.b ENSGT00940000168229 ENSGT00940000156081.j ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 Poeciliinae ANCESTRAL SPECIES 12 ENSGT00900000141021.b.a.d ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000012710.a.a ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00940000170723 ENSGT00950000183005.a.b #29 ENSGT00940000153832.j ENSGT00940000153832.k ENSGT00940000158867 ENSGT00940000158002 ENSGT00940000159129 #22 ENSGT00650000094751 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT00940000156170 ENSGT01090000259997.a.d.a.a.b.d ENSGT01030000234618.E ENSGT00950000182925.B.b ENSGT00940000168229 ENSGT00940000156081.j ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 Poecilia ANCESTRAL SPECIES 84 ENSGT00940000158867.f ENSGT00940000158002 ENSGT00940000159129 #22 ENSGT00650000094751 ENSGT00940000157449.a #24 ENSGT00940000156170 ENSGT01090000259997.a.d.a.a.b.d ENSGT01030000234618.E ENSGT00950000182925.B.b ENSGT00940000168229 ENSGT00940000156081.j ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f NAME_6 ANCESTRAL SPECIES 395 ENSGT00940000158867.f ENSGT00940000158002 ENSGT00940000159129 #22 ENSGT00650000094751 ENSGT00940000157449.a #24 ENSGT00940000156170 ENSGT01090000259997.a.d.a.a.b.d ENSGT01030000234618.E ENSGT00950000182925.B.b Amazon molly MODERN SPECIES 649 DCC (ENSPFOG00000009517) ATP8B1 (ENSPFOG00000009542) TCF4 (ENSPFOG00000009937) #22 ENSPFOG00000010235 ENSPFOG00000010240 ENSPFOG00000022527 RAB27B (ENSPFOG00000010261) #24 txnl1 (ENSPFOG00000010264) ENSPFOG00000010358 NARS1 (ENSPFOG00000010386) ENSPFOG00000010500 Sailfin molly MODERN SPECIES 722 TCF4 (ENSPLAG00000023358) #22 Guppy MODERN SPECIES 16 ENSPREG00000016495 TCF4 (ENSPREG00000016463) #22 Platyfish MODERN SPECIES 22 crata (ENSXMAG00000003884) ENSXMAG00000003899 june (ENSXMAG00000003906) ENSXMAG00000021919 ENSXMAG00000019552 wdr91 (ENSXMAG00000003909) ENSXMAG00000029906 ENSXMAG00000023636 mbd2 (ENSXMAG00000003932) #29 LYZ (ENSXMAG00000011983) LYZ (ENSXMAG00000024335) dcc (ENSXMAG00000003959) ATP8B1 (ENSXMAG00000002723) ENSXMAG00000021652 ENSXMAG00000022384 TCF4 (ENSXMAG00000003820) #22 ENSXMAG00000025687 ENSXMAG00000027761 RAB27B (ENSXMAG00000021119) #24 txnl1 (ENSXMAG00000011789) ENSXMAG00000029530 NARS1 (ENSXMAG00000011755) ENSXMAG00000024287 ENSXMAG00000023480 ENSXMAG00000030080 ENSXMAG00000023817 ENSXMAG00000017314 ENSXMAG00000024869 ENSXMAG00000025821 ENSXMAG00000027170 ENSXMAG00000023999 NAME_4 ANCESTRAL SPECIES 416 ENSGT00940000158867 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.a ENSGT00940000159129 #22 ENSGT00940000157449.a #24 ENSGT00940000156170 Mummichog MODERN SPECIES 2456 ENSFHEG00000011818 dcc (ENSFHEG00000011916) ATP8B1 (ENSFHEG00000012061) ENSFHEG00000012070 TCF4 (ENSFHEG00000012111) #22 RAB27B (ENSFHEG00000012126) #24 txnl1 (ENSFHEG00000012219) Sheepshead minnow MODERN SPECIES 1989 ENSCVAG00000002174 #22 Aplocheiloidei ANCESTRAL SPECIES 176 ENSGT00940000156081.j ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000158002 ENSGT00940000155047.bc ENSGT00940000159129 #22 Turquoise killifish MODERN SPECIES 1611 ENSNFUG00015000874 ENSNFUG00015000658 ALAD (ENSNFUG00015000418) ENSNFUG00015000322 ENSNFUG00015000307 ccni (ENSNFUG00015000295) CCNG2 (ENSNFUG00015000288) TAF1C (ENSNFUG00015000274) ST8SIA3 (ENSNFUG00015000227) ONECUT2 (ENSNFUG00015005014) fech (ENSNFUG00015005007) NARS (ENSNFUG00015004753) txnl1 (ENSNFUG00015004685) ATP8B1 (ENSNFUG00015004337) ENSNFUG00015004222 TCF4 (ENSNFUG00015004100) #22 KIAA0020 (ENSNFUG00015004047) KCNV2 (ENSNFUG00015004038) VLDLR (ENSNFUG00015003869) ENSNFUG00015003810 SH3BP2 (ENSNFUG00015003805) SPP1 (ENSNFUG00015003801) ENSNFUG00015003799 cab39l1 (ENSNFUG00015003797) ghrb (ENSNFUG00015003795) ENSNFUG00015003793 GADD45G (ENSNFUG00015003791) GADD45G (ENSNFUG00015003788) SPIN1 (ENSNFUG00015003784) DNAJC25 (ENSNFUG00015003783) tdgf1 (ENSNFUG00015003782) Mangrove rivulus DUPLICATION Mangrove rivulus MODERN SPECIES 919 ENSKMAG00000007987 #22 Mangrove rivulus MODERN SPECIES 186 EFNA5 (ENSKMAG00000007659) ENSKMAG00000007641 ENSKMAG00000007592 ENSKMAG00000007562 ccni (ENSKMAG00000007540) ccng2 (ENSKMAG00000007519) ENSKMAG00000007498 WDR7 (ENSKMAG00000007389) st8sia3 (ENSKMAG00000007344) ONECUT2 (ENSKMAG00000007330) fech (ENSKMAG00000007309) NARS1 (ENSKMAG00000007257) txnl1 (ENSKMAG00000007234) ATP8B1 (ENSKMAG00000007068) ENSKMAG00000007026 ENSKMAG00000007011 #22 Ovalentaria_B ANCESTRAL SPECIES 14 ENSGT00940000156081.j ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.b ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.b ENSGT01090000260059.a.b.b.a.a.b.a.a ENSGT00390000000360 ENSGT00960000186749 ENSGT00940000161555.b ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460.j ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e Pomacentridae DUPLICATION Pomacentridae ANCESTRAL SPECIES ENSGT00940000159129.`b #22 Bicolor damselfish MODERN SPECIES 2594 ENSSPAG00000005513 #22 Pomacentridae_A ANCESTRAL SPECIES ENSGT00940000159129.`b #22 Spiny chromis MODERN SPECIES 2725 ENSAPOG00000016797 #22 Pomacentridae ANCESTRAL SPECIES 120 ENSGT00940000155301.f ENSGT00390000010767 ENSGT00940000156423.j ENSGT00940000154827 ENSGT00950000183003.a.a.a.a.a ENSGT00940000157778 ENSGT00940000155212.bb ENSGT00940000156081.j ENSGT00940000168229 ENSGT00950000182925.B.b ENSGT00390000013355 ENSGT01090000259997.a.d.b.a.a.a.b.d ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.b.c.b ENSGT00940000159129.ab #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT00390000000360 ENSGT01090000259997.b.b ENSGT01090000259997.a.d.b.a.a.a.b.c.a.a ENSGT00940000154395.a.a.b.a ENSGT00960000186749 ENSGT00940000161555.b ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460.j ENSGT00390000002216 ENSGT00400000024390 Pomacentridae_A ANCESTRAL SPECIES 49 ENSGT00390000008221.a ENSGT00510000048276 ENSGT00950000182935.B.b.c.e ENSGT00870000136549 ENSGT01050000244893.c.a.b.j ENSGT00390000017030.b.b ENSGT00940000160265.g ENSGT00390000009571.a.b.b ENSGT00940000155205 ENSGT00940000165011.a ENSGT00940000164021.B.a ENSGT00940000157307.g.b ENSGT00940000155698.A ENSGT00940000157017.a.b.b ENSGT01090000259997.a.d.b.a.a.a.b.c.b.a.b ENSGT00940000159129.ab #22 ENSGT00940000167600 ENSGT00940000155025.B.i ENSGT00940000156054.c.b ENSGT00940000159737.c ENSGT00960000187848 ENSGT00940000159564 ENSGT00940000162978.a.a.a ENSGT01030000234638.b.a.a ENSGT00530000063646.b ENSGT00940000159327.u.b ENSGT00940000166436 ENSGT00900000141021.b.b.f ENSGT00940000156518.A ENSGT00390000002121 ENSGT00940000159016 Amphiprion ANCESTRAL SPECIES 169 ENSGT00390000004394.g.a.b.b ENSGT00950000183003.a.a.a.a.a ENSGT00940000157778 ENSGT00940000155212.bb ENSGT00940000156081.j ENSGT00940000168229 ENSGT00950000182925.B.b ENSGT00390000013355 ENSGT01090000259997.a.d.b.a.a.a.b.d ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.b.c.b.a.a ENSGT01100000263513.a.a.b.b.b.b.a.a.b.b.b.g.b ENSGT01090000259997.a.d.b.a.a.a.b.c.b.a.b.a ENSGT00940000159129.ab #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.a.b.c.a.b ENSGT00390000000360 ENSGT01090000259997.a.d.b.a.a.a.b.c.a.a.a ENSGT00940000161555.b ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460.j ENSGT00390000002216 ENSGT00970000193381.a.a.a.a.b.b.a.b.f.a.b ENSGT00400000024390 Clown anemonefish MODERN SPECIES 3617 tpt1 (ENSAOCG00000001645) kctd4 (ENSAOCG00000022719) gtf2f2b (ENSAOCG00000022745) TCF4 (ENSAOCG00000022850) #22 Orange clownfish MODERN SPECIES 7 htr1ab (ENSAPEG00000019766) ercc4 (ENSAPEG00000019783) ENSAPEG00000019823 ENSAPEG00000019851 ENSAPEG00000019870 ENSAPEG00000019880 dnajc25 (ENSAPEG00000019921) ENSAPEG00000019961 ENSAPEG00000020005 ENSAPEG00000020034 txnl1 (ENSAPEG00000020051) ATP8B1 (ENSAPEG00000020090) ENSAPEG00000020161 ENSAPEG00000020182 ENSAPEG00000020212 TCF4 (ENSAPEG00000020239) #22 ENSAPEG00000020312 RAB27B (ENSAPEG00000020356) #24 ENSAPEG00000020384 BRCC3 (ENSAPEG00000020392) ENSAPEG00000020413 ENSAPEG00000020447 pum3 (ENSAPEG00000020523) KCNV2 (ENSAPEG00000020572) vldlr (ENSAPEG00000020621) ENSAPEG00000020673 ENSAPEG00000020702 spp1 (ENSAPEG00000020704) ENSAPEG00000020717 ENSAPEG00000020730 ccni (ENSAPEG00000020784) Bicolor damselfish MODERN SPECIES 1954 TCF4 (ENSSPAG00000015186) #22 Cichlidae ANCESTRAL SPECIES 10 ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT01090000259997.a.d.b.a.a.a.b.a.b ENSGT00940000154395.a.a.b.b.h ENSGT01030000234592.A.b.b.b.b.b.b ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.b.b ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.b ENSGT01090000260059.a.b.b.a.a.b.a.a ENSGT00390000000360 ENSGT01090000259997.a.d.b.a.a.a.b.a.a.b ENSGT00960000186749 ENSGT00940000161555.b ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460.j ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT01090000259997.a.d.b.a.a.a.b.a.b ENSGT00940000154395.a.a.b.b.h ENSGT01030000234592.A.b.b.b.b.b.b.a ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.b.b.b.a ENSGT01090000259997.a.d.b.a.a.a.b.b.a ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000260059.a.b.b.a.a.b.a.a ENSGT00390000000360 ENSGT01090000259997.a.d.b.a.a.a.b.a.a.a.b.b ENSGT01090000259997.a.d.b.a.a.a.b.a.a.a.b.a ENSGT01090000259997.a.d.b.a.a.a.b.a.a.b ENSGT00960000186749 ENSGT00940000161555.b ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460.j ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT01090000259997.a.d.b.a.a.a.b.a.b ENSGT00940000154395.a.a.b.b.h ENSGT01030000234592.A.b.b.b.b.b.b.a ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.b.b.b.a ENSGT01090000259997.a.d.b.a.a.a.b.b.a ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000260059.a.b.b.a.a.b.a.a ENSGT00390000000360 ENSGT01090000259997.a.d.b.a.a.a.b.a.a.a.b.b ENSGT01090000259997.a.d.b.a.a.a.b.a.a.a.b.a.a ENSGT01090000259997.a.d.b.a.a.a.a ENSGT01090000259997.a.d.b.a.a.a.b.a.a.b ENSGT00960000186749 ENSGT00940000161555.b ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460.j ENSGT00390000002216 ENSGT00400000024390 Lyretail cichlid MODERN SPECIES 293 ccni (ENSNBRG00000003321) ccng2 (ENSNBRG00000003308) ENSNBRG00000003272 WDR7 (ENSNBRG00000003175) st8sia3 (ENSNBRG00000003139) ONECUT2 (ENSNBRG00000003104) fech (ENSNBRG00000003057) NARS1 (ENSNBRG00000002982) ENSNBRG00000002966 ENSNBRG00000002943 txnl1 (ENSNBRG00000002911) ATP8B1 (ENSNBRG00000002833) ENSNBRG00000002794 ENSNBRG00000002769 ENSNBRG00000002763 TCF4 (ENSNBRG00000002720) #22 RAB27B (ENSNBRG00000002702) #24 ENSNBRG00000002686 BRCC3 (ENSNBRG00000002676) ENSNBRG00000002603 ENSNBRG00000002573 ENSNBRG00000002558 ENSNBRG00000002540 ENSNBRG00000002523 ENSNBRG00000002511 vldlr (ENSNBRG00000001549) Haplochromini ANCESTRAL SPECIES ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d.b ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000154395.a.a.b.b.h ENSGT01090000259997.a.d.b.a.a.a.b.a.b.a ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.b.b.b.a ENSGT01090000259997.a.d.b.a.a.a.b.b.a ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000260059.a.b.b.a.a.b.a.a ENSGT00390000000360 ENSGT01090000259997.a.d.b.a.a.a.b.a.a.a.b.b ENSGT01090000259997.a.d.b.a.a.a.b.a.a.a.b.a.a ENSGT01090000259997.a.d.b.a.a.a.a ENSGT01090000259997.a.d.b.a.a.a.b.a.a.b ENSGT00960000186749 ENSGT00940000161555.b ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460.j ENSGT00390000002216 ENSGT00400000024390 Burton s mouthbrooder MODERN SPECIES 313 txnl1 (ENSHBUG00000013435) ATP8B1 (ENSHBUG00000013396) ENSHBUG00000013257 TCF4 (ENSHBUG00000013229) #22 ENSHBUG00000013099 RAB27B (ENSHBUG00000013082) #24 ENSHBUG00000013055 BRCC3 (ENSHBUG00000013033) ENSHBUG00000013017 ENSHBUG00000012980 ENSHBUG00000012970 ENSHBUG00000012957 ENSHBUG00000012942 pum3 (ENSHBUG00000012903) KCNV2 (ENSHBUG00000012762) vldlr (ENSHBUG00000012735) ENSHBUG00000012693 spp1 (ENSHBUG00000012682) ENSHBUG00000012647 Haplochromini_A ANCESTRAL SPECIES 12 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d.b ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000154395.a.a.b.b.h ENSGT01090000259997.a.d.b.a.a.a.b.a.b.a ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.b.b.b.a ENSGT01090000259997.a.d.b.a.a.a.b.b.a ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000260059.a.b.b.a.a.b.a.a ENSGT00390000000360 ENSGT01090000259997.a.d.b.a.a.a.b.a.a.a.b.b ENSGT01090000259997.a.d.b.a.a.a.b.a.a.a.b.a.a ENSGT01090000259997.a.d.b.a.a.a.a ENSGT01090000259997.a.d.b.a.a.a.b.a.a.b ENSGT00960000186749 ENSGT00940000161555.b ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460.j ENSGT00390000002216 ENSGT00400000024390 Haplochromini_B ANCESTRAL SPECIES 4 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d.b ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000154395.a.a.b.b.h ENSGT01090000259997.a.d.b.a.a.a.b.a.b.a ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.b.b.b.a ENSGT01090000259997.a.d.b.a.a.a.b.b.a ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000260059.a.b.b.a.a.b.a.a ENSGT00390000000360 ENSGT01090000259997.a.d.b.a.a.a.b.a.a.a.b.a.a ENSGT01030000234592.A.b.b.b.b.b.b.a ENSGT01090000259997.a.d.b.a.a.a.a ENSGT01090000259997.a.d.b.a.a.a.b.a.a.b ENSGT00960000186749 ENSGT00940000161555.b ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460.j ENSGT00390000002216 ENSGT00400000024390 Eastern happy MODERN SPECIES 19 ccni (ENSACLG00000002750) ccng2 (ENSACLG00000002699) ENSACLG00000002660 WDR7 (ENSACLG00000002530) st8sia3 (ENSACLG00000002249) ONECUT2 (ENSACLG00000002226) fech (ENSACLG00000002215) NARS1 (ENSACLG00000002165) ENSACLG00000002145 txnl1 (ENSACLG00000001888) ATP8B1 (ENSACLG00000001747) ENSACLG00000001732 ENSACLG00000001713 ENSACLG00000001701 ENSACLG00000001684 TCF4 (ENSACLG00000001501) #22 ENSACLG00000001261 RAB27B (ENSACLG00000001237) #24 ENSACLG00000001222 BRCC3 (ENSACLG00000001209) ENSACLG00000001200 ENSACLG00000001104 ENSACLG00000001093 ENSACLG00000001084 ENSACLG00000001068 ENSACLG00000001037 pum3 (ENSACLG00000001017) KCNV2 (ENSACLG00000000959) vldlr (ENSACLG00000000752) ENSACLG00000000714 ENSACLG00000000710 Zebra mbuna MODERN SPECIES 1110 ndor1 (ENSMZEG00005000971) ntmt1 (ENSMZEG00005001015) ier5l (ENSMZEG00005001033) ptpa (ENSMZEG00005001052) crata (ENSMZEG00005001100) ENSMZEG00005001143 june (ENSMZEG00005001171) THAP1 (ENSMZEG00005001180) wdr91 (ENSMZEG00005001192) ENSMZEG00005001285 ENSMZEG00005001314 #26 mbd2 (ENSMZEG00005001327) #29 ENSMZEG00005001330 ENSMZEG00005001335 ENSMZEG00005001376 TCF4 (ENSMZEG00005014060) #22 ENSMZEG00005014081 RAB27B (ENSMZEG00005014107) #24 ENSMZEG00005014124 BRCC3 (ENSMZEG00005014135) ENSMZEG00005014150 ENSMZEG00005014156 ENSMZEG00005014162 ENSMZEG00005014164 ENSMZEG00005014175 ENSMZEG00005014180 pum3 (ENSMZEG00005014205) ENSMZEG00005014234 KCNV2 (ENSMZEG00005014245) vldlr (ENSMZEG00005014267) ENSMZEG00005014316 P. nyererei MODERN SPECIES 311 ENSPNYG00000014979 ccni (ENSPNYG00000015007) ccng2 (ENSPNYG00000015048) ENSPNYG00000015080 WDR7 (ENSPNYG00000015126) ENSPNYG00000015227 st8sia3 (ENSPNYG00000015250) ONECUT2 (ENSPNYG00000015270) fech (ENSPNYG00000015294) NARS1 (ENSPNYG00000015321) ENSPNYG00000015360 ENSPNYG00000015377 txnl1 (ENSPNYG00000015392) ATP8B1 (ENSPNYG00000015427) ENSPNYG00000015477 TCF4 (ENSPNYG00000015605) #22 RAB27B (ENSPNYG00000015975) #24 ENSPNYG00000015999 BRCC3 (ENSPNYG00000016007) ENSPNYG00000016019 ENSPNYG00000016033 ENSPNYG00000016056 ENSPNYG00000016069 ENSPNYG00000016080 ENSPNYG00000016094 pum3 (ENSPNYG00000016124) KCNV2 (ENSPNYG00000016139) vldlr (ENSPNYG00000016175) ENSPNYG00000016220 spp1 (ENSPNYG00000016232) ENSPNYG00000016264 Nile tilapia MODERN SPECIES 19 ccng2 (ENSONIG00000012684) ENSONIG00000024316 WDR7 (ENSONIG00000012686) st8sia3 (ENSONIG00000012692) ONECUT2 (ENSONIG00000012694) fech (ENSONIG00000028424) NARS1 (ENSONIG00000012699) ENSONIG00000041810 ENSONIG00000042724 ENSONIG00000012710 ENSONIG00000032599 txnl1 (ENSONIG00000012713) ATP8B1 (ENSONIG00000012716) ENSONIG00000021051 ENSONIG00000008272 TCF4 (ENSONIG00000012720) #22 ENSONIG00000012723 RAB27B (ENSONIG00000012725) #24 ENSONIG00000031412 BRCC3 (ENSONIG00000021052) ENSONIG00000021053 ENSONIG00000021054 ENSONIG00000012728 ENSONIG00000043021 ENSONIG00000029621 ENSONIG00000033517 ENSONIG00000012730 pum3 (ENSONIG00000030356) KCNV2 (ENSONIG00000012740) vldlr (ENSONIG00000012744) ENSONIG00000012759 Midas cichlid MODERN SPECIES 993 ENSACIG00000018105 ENSACIG00000018115 TCF4 (ENSACIG00000018145) #22 RAB27B (ENSACIG00000018189) #24 ENSACIG00000018204 ENSACIG00000018228 ENSACIG00000018239 ENSACIG00000018254 ENSACIG00000018272 ENSACIG00000018285 ENSACIG00000018287 Percomorphaceae_C ANCESTRAL SPECIES 17 ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT01090000259997.a.d.b.a.a.b.a.a ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.a ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.b.b ENSGT00390000000360 ENSGT00960000186749 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e ENSGT00940000153725.b.c Percomorphaceae_D ANCESTRAL SPECIES 15 ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT01090000259997.a.d.b.a.a.b.a.a ENSGT00940000156170 ENSGT00940000158002 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.b.b ENSGT00390000000360 ENSGT00940000173558 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e ENSGT00940000153725.b.c Carangaria ANCESTRAL SPECIES 17 ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT01090000259997.a.d.b.a.a.b.a.a ENSGT00940000156170 ENSGT00940000158002 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.b.b ENSGT00390000000360 ENSGT00940000173558 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e ENSGT00940000153725.b.c Carangaria_A ANCESTRAL SPECIES 34 ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT01090000259997.a.d.b.a.a.b.a.a ENSGT00940000156170 ENSGT00940000158002 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.b.b ENSGT00390000000360 ENSGT01090000260059.a.b.b.a.a.b.a.a ENSGT01090000260029.a.a.b.a.a.b ENSGT01090000259997.a.d.b.a.a.b.a.b ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a Seriola ANCESTRAL SPECIES 33 ENSGT00940000161047 ENSGT01020000230360.c.b.a.b.a.b.c.a.b ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT01090000259997.a.d.b.a.a.b.a.a.f ENSGT01090000259997.a.d.b.a.a.b.a.a.e ENSGT00940000156170 ENSGT00940000158002 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.b.b ENSGT00390000000360 ENSGT01090000260059.a.b.b.a.a.b.a.a ENSGT01090000260029.a.a.b.a.a.b ENSGT01090000259997.a.d.b.a.a.b.a.b ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e Greater amberjack MODERN SPECIES 34 ENSSDUG00000000849 ENSSDUG00000000860 ENSSDUG00000000958 ccni (ENSSDUG00000000975) ccng2 (ENSSDUG00000000989) ENSSDUG00000001023 WDR7 (ENSSDUG00000001053) st8sia3 (ENSSDUG00000001195) ONECUT2 (ENSSDUG00000001221) fech (ENSSDUG00000001240) NARS1 (ENSSDUG00000001252) ENSSDUG00000001301 ENSSDUG00000001317 txnl1 (ENSSDUG00000001362) ATP8B1 (ENSSDUG00000001405) TCF4 (ENSSDUG00000001620) #22 ENSSDUG00000001662 RAB27B (ENSSDUG00000001700) #24 BRCC3 (ENSSDUG00000001742) ENSSDUG00000001771 ENSSDUG00000001781 ENSSDUG00000001796 ENSSDUG00000001801 ENSSDUG00000001805 ENSSDUG00000001812 ENSSDUG00000001830 pum3 (ENSSDUG00000001887) KCNV2 (ENSSDUG00000001917) vldlr (ENSSDUG00000001965) ENSSDUG00000002123 spp1 (ENSSDUG00000002143) Yellowtail amberjack MODERN SPECIES 2897 ccni (ENSSLDG00000022348) ccng2 (ENSSLDG00000022295) ENSSLDG00000022281 ENSSLDG00000022276 WDR7 (ENSSLDG00000022223) st8sia3 (ENSSLDG00000022203) ONECUT2 (ENSSLDG00000022196) fech (ENSSLDG00000022176) NARS1 (ENSSLDG00000022141) ENSSLDG00000022120 ENSSLDG00000022069 ENSSLDG00000022055 txnl1 (ENSSLDG00000022030) ATP8B1 (ENSSLDG00000021936) ENSSLDG00000021922 TCF4 (ENSSLDG00000021898) #22 Barramundi perch MODERN SPECIES 376 fech (ENSLCAG00010008168) NARS1 (ENSLCAG00010007583) ENSLCAG00010007429 ENSLCAG00010007423 ENSLCAG00010007420 txnl1 (ENSLCAG00010007399) ATP8B1 (ENSLCAG00010006599) ENSLCAG00010006375 ENSLCAG00010006369 TCF4 (ENSLCAG00010006347) #22 Pleuronectoidei ANCESTRAL SPECIES 7 ENSGT00950000182925.B.b ENSGT00940000156081.j ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000158002 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT00390000000360 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT01010000222287.B.b.b.b ENSGT00950000182909.a.e ENSGT00940000182054 ENSGT00940000153725.b.c ENSGT00940000156814 ENSGT00940000156804.b ENSGT00940000165107.A Tongue sole MODERN SPECIES 5 swi5 (ENSCSEG00000016304) FAM163B (ENSCSEG00000016299) ENSCSEG00000016291 dbh (ENSCSEG00000016280) sardh (ENSCSEG00000016253) CERCAM (ENSCSEG00000016210) urm1 (ENSCSEG00000016193) SH2D3C (ENSCSEG00000016165) STRBP (ENSCSEG00000016110) ONECUT2 (ENSCSEG00000016089) fech (ENSCSEG00000016077) NARS1 (ENSCSEG00000016023) txnl1 (ENSCSEG00000016010) ATP8B1 (ENSCSEG00000015934) ENSCSEG00000015883 TCF4 (ENSCSEG00000015821) #22 ENSCSEG00000015780 ENSCSEG00000015719 tjp2a (ENSCSEG00000015649) zfand5b (ENSCSEG00000015606) ENSCSEG00000015531 ENSCSEG00000015519 slc30a5 (ENSCSEG00000015496) MAMDC2 (ENSCSEG00000015482) ENSCSEG00000015462 ccnb1 (ENSCSEG00000015441) ENSCSEG00000015430 ENSCSEG00000015424 NPR1 (ENSCSEG00000015407) alad (ENSCSEG00000015390) tmem203 (ENSCSEG00000015388) Turbot MODERN SPECIES 7 ENSSMAG00000011990 ENSSMAG00000022983 ENSSMAG00000028070 ENSSMAG00000035477 ccni (ENSSMAG00000012130) ccng2 (ENSSMAG00000012134) ENSSMAG00000012159 WDR7 (ENSSMAG00000012218) st8sia3 (ENSSMAG00000012405) ONECUT2 (ENSSMAG00000023230) fech (ENSSMAG00000012428) NARS1 (ENSSMAG00000012447) ENSSMAG00000028872 ENSSMAG00000012529 ENSSMAG00000012936 ENSSMAG00000013139 #22 ENSSMAG00000025178 ENSSMAG00000013162 #24 ENSSMAG00000013224 pum3 (ENSSMAG00000013236) ENSSMAG00000013264 vldlr (ENSSMAG00000013317) ENSSMAG00000013364 spp1 (ENSSMAG00000013393) ENSSMAG00000013425 rnf180b (ENSSMAG00000013439) c6 (ENSSMAG00000013493) c7b (ENSSMAG00000013548) ghrb (ENSSMAG00000013583) ENSSMAG00000030390 gadd45gb.1 (ENSSMAG00000026637) Anabantaria ANCESTRAL SPECIES 12 ENSGT00940000156081.j ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT01090000259997.a.d.b.a.a.b.a.a ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.b.b ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT00390000000360 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e ENSGT00940000156814 ENSGT00940000156804.b ENSGT00940000165107.A Zig-zag eel MODERN SPECIES 3 ENSMAMG00000022798 ENSMAMG00000022803 ENSMAMG00000022805 ENSMAMG00000022807 ENSMAMG00000027025 ENSMAMG00000022813 ENSMAMG00000022817 ccni (ENSMAMG00000022820) WDR7 (ENSMAMG00000022823) st8sia3 (ENSMAMG00000022827) ONECUT2 (ENSMAMG00000022829) fech (ENSMAMG00000022832) NARS1 (ENSMAMG00000022834) ENSMAMG00000022840 ENSMAMG00000022842 ENSMAMG00000022848 #22 ENSMAMG00000022850 ENSMAMG00000022852 #24 ENSMAMG00000022853 ENSMAMG00000022857 pum3 (ENSMAMG00000022861) ENSMAMG00000022863 vldlr (ENSMAMG00000022867) ENSMAMG00000022870 spp1 (ENSMAMG00000022873) ENSMAMG00000027003 htr1ab (ENSMAMG00000022881) rnf180b (ENSMAMG00000022882) c6 (ENSMAMG00000000431) c7b (ENSMAMG00000000472) ghrb (ENSMAMG00000000577) Anabantoidei ANCESTRAL SPECIES 16 ENSGT00940000156081.j ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT01090000259997.a.d.b.a.a.b.a.a ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.b.b ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT00390000000360 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT01010000222287.B.b.b.b ENSGT00950000182909.a.e ENSGT00940000156814 ENSGT00940000156804.b ENSGT00940000165107.A ENSGT00390000010075 Siamese fighting fish MODERN SPECIES 3 ENSBSLG00000012486 WDR7 (ENSBSLG00000012085) st8sia3 (ENSBSLG00000011983) ONECUT2 (ENSBSLG00000011969) fech (ENSBSLG00000011718) NARS1 (ENSBSLG00000010411) ENSBSLG00000010389 txnl1 (ENSBSLG00000010378) ATP8B1 (ENSBSLG00000009318) ENSBSLG00000009247 ENSBSLG00000009240 ENSBSLG00000009233 ENSBSLG00000009220 ENSBSLG00000009217 ENSBSLG00000009210 TCF4 (ENSBSLG00000008105) #22 RAB27B (ENSBSLG00000008042) #24 BRCC3 (ENSBSLG00000008033) ENSBSLG00000008025 SCAI (ENSBSLG00000007810) dync2i2 (ENSBSLG00000007585) setb (ENSBSLG00000007574) ENSBSLG00000006801 zdhhc12b (ENSBSLG00000006393) uap1l1 (ENSBSLG00000006347) slc25a25b (ENSBSLG00000006008) naif1 (ENSBSLG00000005992) dpm2 (ENSBSLG00000005988) PIP5KL1 (ENSBSLG00000005983) SH3GLB2 (ENSBSLG00000005922) zer1 (ENSBSLG00000005752) Climbing perch MODERN SPECIES 13 ccni (ENSATEG00000006918) ccng2 (ENSATEG00000006915) ENSATEG00000006899 WDR7 (ENSATEG00000006769) st8sia3 (ENSATEG00000006732) ONECUT2 (ENSATEG00000006712) fech (ENSATEG00000006441) fech (ENSATEG00000006223) NARS1 (ENSATEG00000006362) ENSATEG00000006274 ENSATEG00000006128 ENSATEG00000029820 ENSATEG00000006077 ENSATEG00000029481 ENSATEG00000029634 ENSATEG00000005969 #22 ENSATEG00000005953 ENSATEG00000029751 #24 ENSATEG00000005889 ENSATEG00000005860 ENSATEG00000005869 ENSATEG00000027271 pum3 (ENSATEG00000005799) ENSATEG00000005748 vldlr (ENSATEG00000005643) ENSATEG00000005628 spp1 (ENSATEG00000005599) ENSATEG00000028501 htr1ab (ENSATEG00000005553) ENSATEG00000028660 c6 (ENSATEG00000005269) Eupercaria ANCESTRAL SPECIES 13 ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT01090000259997.a.d.b.a.a.b.a.a ENSGT00940000156170 ENSGT00940000158002 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.b.b ENSGT00390000000360 ENSGT00960000186749 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e ENSGT00940000153725.b.c Tetraodontidae ANCESTRAL SPECIES 76 ENSGT00390000013355 ENSGT00950000182925.B.b ENSGT00940000156081.j ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000158002 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT00390000000360 ENSGT00390000015757 ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT01010000222287.B.b.b.b ENSGT00950000182909.a.e Fugu MODERN SPECIES 18 ccni (ENSTRUG00000001062) ccng2 (ENSTRUG00000025388) ENSTRUG00000032032 ENSTRUG00000021624 WDR7 (ENSTRUG00000000758) ENSTRUG00000026093 ENSTRUG00000028041 siat 8C (ENSTRUG00000000705) ONECUT2 (ENSTRUG00000000677) fech (ENSTRUG00000031706) txnl1 (ENSTRUG00000026330) txnl1 (ENSTRUG00000029001) NARS1 (ENSTRUG00000026707) txnl1 (ENSTRUG00000029638) ATP8B1 (ENSTRUG00000000117) TCF4 (ENSTRUG00000002569) #22 ENSTRUG00000030649 RAB27B (ENSTRUG00000003528) #24 BRCC3 (ENSTRUG00000003833) pum3 (ENSTRUG00000004074) vldlr (ENSTRUG00000004731) ENSTRUG00000005580 spp1 (ENSTRUG00000005889) ENSTRUG00000029564 htr1a-B (ENSTRUG00000005939) ENSTRUG00000006045 wdr91 (ENSTRUG00000006084) THAP1 (ENSTRUG00000023030) crata (ENSTRUG00000030328) ptpa (ENSTRUG00000007171) ier5l (ENSTRUG00000007279) Tetraodon MODERN SPECIES 26 zgc:86811 (ENSTNIG00000010601) ube2l3b (ENSTNIG00000010600) ydjc (ENSTNIG00000010599) ENSTNIG00000010598 tncb (ENSTNIG00000010597) TRAF2 (ENSTNIG00000010596) RABL6 (ENSTNIG00000010595) imp4 (ENSTNIG00000010594) araf (ENSTNIG00000010593) zgc:64051 (ENSTNIG00000010592) CRB2 (ENSTNIG00000010591) lhx2b (ENSTNIG00000010590) ADGRD2 (ENSTNIG00000010589) nr5a1a (ENSTNIG00000010588) nr6a1a (ENSTNIG00000010587) TCF4 (ENSTNIG00000010330) #22 ENSTNIG00000010329 RAB27B (ENSTNIG00000010328) #24 BRCC3 (ENSTNIG00000010327) ENSTNIG00000010326 pum3 (ENSTNIG00000010325) KCNV2 (ENSTNIG00000010324) cables1 (ENSTNIG00000010323) vldlr (ENSTNIG00000010322) ENSTNIG00000007214 spp1 (ENSTNIG00000000575) ENSTNIG00000007213 lrsam1 (ENSTNIG00000007212) ndor1 (ENSTNIG00000007211) ntmt1 (ENSTNIG00000007210) ier5l (ENSTNIG00000007209) Eupecaria_A ANCESTRAL SPECIES 14 ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT01090000259997.a.d.b.a.a.b.a.a ENSGT00940000156170 ENSGT00940000158002 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.b.b ENSGT00390000000360 ENSGT00960000186749 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e ENSGT00940000153725.b.c Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 368 ENSLBEG00000012479 TCF4 (ENSLBEG00000012435) #22 ENSLBEG00000012393 RAB27B (ENSLBEG00000012368) #24 ENSLBEG00000012345 ENSLBEG00000012325 BRCC3 (ENSLBEG00000012307) ENSLBEG00000012289 ENSLBEG00000012253 pum3 (ENSLBEG00000012213) KCNV2 (ENSLBEG00000012181) vldlr (ENSLBEG00000012076) ENSLBEG00000011957 spp1 (ENSLBEG00000011909) Ballan wrasse MODERN SPECIES 2364 ENSLBEG00000001667 #22 Eupecaria_B ANCESTRAL SPECIES 14 ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT01090000259997.a.d.b.a.a.b.a.a ENSGT00940000156170 ENSGT00940000158002 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.b.b ENSGT00390000000360 ENSGT00960000186749 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e ENSGT00940000153725.b.c Eupecaria_C ANCESTRAL SPECIES 9 ENSGT00940000156081.j ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000158002 ENSGT01090000259997.a.d.b.a.a.a.a ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.b.b ENSGT00390000000360 ENSGT00960000186749 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e ENSGT00940000156814 Eupercaria_incertae_sedis ANCESTRAL SPECIES 6 ENSGT00940000168229 ENSGT00940000156081.j ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000158002 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.b.b ENSGT00390000000360 ENSGT00960000186749 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e ENSGT00940000156814 Large yellow croaker MODERN SPECIES 12 ENSLCRG00005017938 ENSLCRG00005017920 ccni (ENSLCRG00005017912) ccng2 (ENSLCRG00005017905) ENSLCRG00005017899 ENSLCRG00005017878 WDR7 (ENSLCRG00005017691) ENSLCRG00005017630 st8sia3 (ENSLCRG00005017624) ONECUT2 (ENSLCRG00005017616) fech (ENSLCRG00005017584) NARS1 (ENSLCRG00005017431) txnl1 (ENSLCRG00005017372) ATP8B1 (ENSLCRG00005016268) ENSLCRG00005016029 TCF4 (ENSLCRG00005015408) #22 ENSLCRG00005015297 ENSLCRG00005015277 RAB27B (ENSLCRG00005015238) #24 ENSLCRG00005015229 BRCC3 (ENSLCRG00005015226) ENSLCRG00005015217 ENSLCRG00005015210 European seabass MODERN SPECIES 9 ENSDLAG00005006167 ENSDLAG00005005739 ENSDLAG00005005639 ENSDLAG00005028544 ENSDLAG00005031415 ENSDLAG00005005343 WDR7 (ENSDLAG00005005249) ST8SIA3 (ENSDLAG00005005227) FECH (ENSDLAG00005032944) NARS1 (ENSDLAG00005003268) ENSDLAG00005003214 ENSDLAG00005033162 ENSDLAG00005003152 ENSDLAG00005002123 ENSDLAG00005029409 ENSDLAG00005025219 #22 ENSDLAG00005025205 ENSDLAG00005032109 #24 ENSDLAG00005034762 ENSDLAG00005025202 ENSDLAG00005034810 ENSDLAG00005025200 ENSDLAG00005025186 pum3 (ENSDLAG00005025152) ENSDLAG00005025140 vldlr (ENSDLAG00005024836) ENSDLAG00005031541 spp1 (ENSDLAG00005024800) ENSDLAG00005024799 htr1ab (ENSDLAG00005030486) c6 (ENSDLAG00005024775) Gilthead seabream MODERN SPECIES 3 ndor1 (ENSSAUG00010008605) ccni (ENSSAUG00010008613) ccng2 (ENSSAUG00010008615) ENSSAUG00010008620 WDR7 (ENSSAUG00010008641) st8sia3 (ENSSAUG00010008655) ONECUT2 (ENSSAUG00010008656) fech (ENSSAUG00010008663) NARS1 (ENSSAUG00010008963) ENSSAUG00010009276 txnl1 (ENSSAUG00010009280) ATP8B1 (ENSSAUG00010009328) ENSSAUG00010011918 ENSSAUG00010011919 ENSSAUG00010011921 TCF4 (ENSSAUG00010011934) #22 ENSSAUG00010011975 RAB27B (ENSSAUG00010011981) #24 ENSSAUG00010011984 BRCC3 (ENSSAUG00010011985) ENSSAUG00010011986 pum3 (ENSSAUG00010011989) KCNV2 (ENSSAUG00010011990) vldlr (ENSSAUG00010012061) ENSSAUG00010017673 spp1 (ENSSAUG00010017675) rnf180b (ENSSAUG00010017684) c6 (ENSSAUG00010017690) c7b (ENSSAUG00010017700) ghrb (ENSSAUG00010018083) ENSSAUG00010018164 Perciformes ANCESTRAL SPECIES 16 ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT01090000259997.a.d.b.a.a.b.a.a ENSGT00940000156170 ENSGT00940000158002 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.b.b ENSGT00390000000360 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e ENSGT00940000153725.b.c ENSGT00940000156814 Cottioidei ANCESTRAL SPECIES 31 ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT01090000259997.a.d.b.a.a.b.a.a ENSGT00940000156170 ENSGT00940000158002 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 Lumpfish MODERN SPECIES 3 ENSCLMG00005020695 ndor1 (ENSCLMG00005020688) lrsam1 (ENSCLMG00005020684) lmo4a (ENSCLMG00005020679) ccni (ENSCLMG00005020674) ccng2 (ENSCLMG00005020672) ENSCLMG00005020669 WDR7 (ENSCLMG00005018918) st8sia3 (ENSCLMG00005018909) ONECUT2 (ENSCLMG00005018908) fech (ENSCLMG00005018869) NARS1 (ENSCLMG00005018686) txnl1 (ENSCLMG00005018678) ATP8B1 (ENSCLMG00005018432) ENSCLMG00005018422 TCF4 (ENSCLMG00005018420) #22 ENSCLMG00005018417 ENSCLMG00005018415 ENSCLMG00005018414 rassf6 (ENSCLMG00005018413) MUSK (ENSCLMG00005018406) lpar1 (ENSCLMG00005018404) ENSCLMG00005018402 ENSCLMG00005018399 UNC13B (ENSCLMG00005010930) stoml2 (ENSCLMG00005010209) PIGO (ENSCLMG00005010182) PHF24 (ENSCLMG00005010176) prkab1a (ENSCLMG00005010175) PLA2G1B (ENSCLMG00005010130) ENSCLMG00005010128 Stickleback MODERN SPECIES 580 fech (ENSGACG00000000651) NARS1 (ENSGACG00000000648) ENSGACG00000000647 txnl1 (ENSGACG00000000637) ATP8B1 (ENSGACG00000000631) TCF4 (ENSGACG00000000628) #22 ENSGACG00000000626 ENSGACG00000000624 ENSGACG00000000622 ENSGACG00000000621 ENSGACG00000000620 Perciformes_a ANCESTRAL SPECIES 12 ENSGT00950000182925.B.b ENSGT00940000156081.j ENSGT00940000155212.bb ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000155301.f ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000158002 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449.a #24 ENSGT01090000259997.a.d.b.a.a.b.b ENSGT00390000000360 ENSGT00940000161555 ENSGT00390000015757 ENSGT00940000157438.d ENSGT00940000155460 ENSGT00390000002216 ENSGT00400000024390 ENSGT01050000245201 ENSGT00940000154484.B.a.a ENSGT00950000182909.a.e ENSGT00940000156814 ENSGT00940000156804.b Channel bull blenny MODERN SPECIES 3 AJM1 (ENSCGOG00000022564) MAPKAP1 (ENSCGOG00000022568) ENSCGOG00000022605 ccni (ENSCGOG00000022606) ccng2 (ENSCGOG00000022608) ENSCGOG00000022611 WDR7 (ENSCGOG00000022622) st8sia3 (ENSCGOG00000022661) ONECUT2 (ENSCGOG00000022666) fech (ENSCGOG00000022679) NARS1 (ENSCGOG00000022857) ENSCGOG00000023090 txnl1 (ENSCGOG00000023091) ENSCGOG00000023100 ATP8B1 (ENSCGOG00000023137) TCF4 (ENSCGOG00000023498) #22 ENSCGOG00000023569 ENSCGOG00000001269 RAB27B (ENSCGOG00000001289) #24 ENSCGOG00000001298 BRCC3 (ENSCGOG00000001307) ENSCGOG00000001312 pum3 (ENSCGOG00000001345) KCNV2 (ENSCGOG00000001500) vldlr (ENSCGOG00000001657) ENSCGOG00000005511 spp1 (ENSCGOG00000005525) htr1ab (ENSCGOG00000005533) rnf180b (ENSCGOG00000005535) c6 (ENSCGOG00000005558) c7b (ENSCGOG00000005682) Pike perch MODERN SPECIES 47 ENSSLUG00000011587 ccni (ENSSLUG00000011577) ccng2 (ENSSLUG00000011573) ENSSLUG00000011563 WDR7 (ENSSLUG00000011468) ENSSLUG00000011421 st8sia3 (ENSSLUG00000011417) ONECUT2 (ENSSLUG00000011416) fech (ENSSLUG00000010433) NARS1 (ENSSLUG00000008804) ENSSLUG00000008738 txnl1 (ENSSLUG00000008731) ATP8B1 (ENSSLUG00000007350) ENSSLUG00000007228 ENSSLUG00000007221 TCF4 (ENSSLUG00000007170) #22 RAB27B (ENSSLUG00000024939) #24 ENSSLUG00000024938 BRCC3 (ENSSLUG00000024937) ENSSLUG00000024935 ENSSLUG00000024934 ENSSLUG00000024930 ENSSLUG00000024927 pum3 (ENSSLUG00000024824) KCNV2 (ENSSLUG00000024782) vldlr (ENSSLUG00000023068) ENSSLUG00000022861 ENSSLUG00000022857 spp1 (ENSSLUG00000022852) ENSSLUG00000022848 htr1ab (ENSSLUG00000022843) Otomorpha ANCESTRAL SPECIES 17 ENSGT01030000235124 ENSGT00940000153372.A.e.a.a ENSGT00390000007731 ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000158002 ENSGT00940000155301.a ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449 #24 ENSGT00390000001566 ENSGT00390000008823 #26 Otophysi ANCESTRAL SPECIES 217 ENSGT00950000182870.a.a.a.b ENSGT00950000182971.C.pc.b ENSGT00950000182971.C.pc.a ENSGT00940000159594 ENSGT00950000182940.b.b.f ENSGT00940000155123.b.b ENSGT00940000155305.b.b ENSGT00940000161373 ENSGT00940000158581 ENSGT00940000155301.a ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449 #24 ENSGT00390000001566 ENSGT00390000009313.ib.b.b.a ENSGT00390000009313.ib.b.a ENSGT00390000008823 #26 ENSGT00940000153372.A.e.a.a ENSGT01030000235124 ENSGT00940000153372.A.e.a.b.b Cyprinoidei ANCESTRAL SPECIES 152 ENSGT00950000182971.C.pc.a ENSGT00940000159594 ENSGT00950000182940.b.b.f ENSGT00940000155123.b.b ENSGT00940000155305.b.b ENSGT00940000161373 ENSGT01090000260030.a.b.a.a.b.b.a.a.b ENSGT00940000158581 ENSGT00940000155301.a ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT01050000245095 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449 #24 ENSGT00390000001566 ENSGT00390000009313.ib.b.b.a ENSGT00390000009313.ib.b.a ENSGT00390000008823 #26 ENSGT00940000153372.A.e.a.a ENSGT01030000235124 ENSGT00940000153372.A.e.a.b.b Zebrafish MODERN SPECIES 13 plgrkt (ENSDARG00000100789) lhfpl2a (ENSDARG00000009653) ZNF462 (ENSDARG00000112909) rad23b (ENSDARG00000021550) klf4 (ENSDARG00000079922) nop14 (ENSDARG00000098859) ENSDARG00000068589 ENSDARG00000100549 oaz1b (ENSDARG00000104782) txnl1 (ENSDARG00000011921) NARS1 (ENSDARG00000061100) ENSDARG00000089844 ENSDARG00000102894 ENSDARG00000110653 ENSDARG00000113371 TCF4 (ENSDARG00000107408) #22 RAB27B (ENSDARG00000087762) #24 wdr91 (ENSDARG00000015153) vmo1b (ENSDARG00000045299) zgc:152948 (ENSDARG00000071487) #26 fech (ENSDARG00000003462) ONECUT2 (ENSDARG00000090387) st8sia3 (ENSDARG00000045301) WDR7 (ENSDARG00000100274) add1 (ENSDARG00000103962) ENSDARG00000099717 ENSDARG00000100324 si:rp71-1h20.5 (ENSDARG00000098176) ENSDARG00000100179 ENSDARG00000104798 zgc:163077 (ENSDARG00000101593) Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00940000159129.db #22 Goldfish MODERN SPECIES 2430 TCF4 (ENSCARG00000063776) #22 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 221 ENSGT01030000234618.E.k ENSGT00940000156170.k.a ENSGT00940000159129.eb.b #22 ENSGT00940000167600.a ENSGT00940000157449.c #24 ENSGT00390000001566.d ENSGT00390000009313.ib.b.b.a.a ENSGT00390000009313.ib.b.a.e.a.b.a ENSGT00940000158581.r ENSGT00940000155301.a.a.b ENSGT01030000234535.E.d.f ENSGT00950000183103.d.a.b.g ENSGT00390000016258.e.b ENSGT01030000234618.E.j.a ENSGT00940000156170.k.b ENSGT00940000159129.eb.a #22 ENSGT00940000167600.b ENSGT00940000157449.d #24 ENSGT00390000001566.c ENSGT00390000009313.ib.b.b.a.b ENSGT00390000009313.ib.b.a.f ENSGT00390000009313.ib.b.a.e.b.a.b ENSGT00390000008823 #26 ENSGT00940000153372.A.e.a.a.b ENSGT01030000235124.a.a ENSGT00940000153372.A.e.a.b.b.h ENSGT00390000002955.b ENSGT01090000260030.a.b.a.a.b.b.b.a.b ENSGT01050000244840.A.a.b.f.m.a.a.a Goldfish MODERN SPECIES 704 ENSCARG00000038636 ENSCARG00000038616 oaz1b (ENSCARG00000038582) ENSCARG00000038515 ENSCARG00000038493 add1 (ENSCARG00000038293) ENSCARG00000038262 st8sia3 (ENSCARG00000038215) ONECUT2 (ENSCARG00000038205) NARS1 (ENSCARG00000032584) txnl1 (ENSCARG00000032337) TCF4 (ENSCARG00000031853) #22 Cyprininae_a ANCESTRAL SPECIES 434 ENSGT00940000158581.r ENSGT00940000155301.a.a.b ENSGT01030000234535.E.d.f ENSGT00950000183103.d.a.b.g ENSGT00390000016258.e.b ENSGT01030000234618.E.j.a ENSGT00940000156170.k.b ENSGT00940000159129.eb.a #22 ENSGT00940000167600.b ENSGT00940000157449.d #24 ENSGT00390000001566.c ENSGT00390000009313.ib.b.b.a.b ENSGT00390000009313.ib.b.a.f ENSGT00390000008823.a #26 ENSGT00940000153372.A.e.a.a.a ENSGT01030000235124.a.b ENSGT00940000153372.A.e.a.b.b.g ENSGT00390000002955.a ENSGT00530000063839.w ENSGT00390000009313.ib.b.a.e.a.a.b Common carp reference MODERN SPECIES 38 ENSCCRG00000035607 RAD23B (ENSCCRG00000046888) ZNF462 (ENSCCRG00000064466) TMEM38B (ENSCCRG00000077001) ENSCCRG00000049201 ENSCCRG00000049214 ENSCCRG00000077644 ENSCCRG00000074907 add1 (ENSCCRG00000026049) WDR7 (ENSCCRG00000056871) ST8SIA3 (ENSCCRG00000060003) ONECUT2 (ENSCCRG00000067353) fech (ENSCCRG00000078900) NARS1 (ENSCCRG00000066367) TXNL1 (ENSCCRG00000021457) ENSCCRG00000053048 #22 ENSCCRG00000069791 RAB27B (ENSCCRG00000061167) #24 wdr91 (ENSCCRG00000013862) ENSCCRG00000080582 zgc:152948 (ENSCCRG00000074730) #26 ENSCCRG00000037244 ENSCCRG00000058598 ENSCCRG00000029124 ENSCCRG00000031929 ENSCCRG00000063052 ENSCCRG00000072598 ENSCCRG00000042588 ENSCCRG00000055098 hmgcrb (ENSCCRG00000029267) ENSCCRG00000054954 Golden-line barbel MODERN SPECIES 937 TCF4 (ENSSGRG00000048723) #22 ENSSGRG00000048715 #24 wdr91 (ENSSGRG00000048536) ENSSGRG00000048530 ENSSGRG00000048529 ENSSGRG00000048520 ENSSGRG00000048516 ENSSGRG00000048509 PAX1 (ENSSGRG00000048507) ENSSGRG00000048506 ENSSGRG00000048504 ENSSGRG00000048503 ENSSGRG00000048472 Cyprininae ANCESTRAL SPECIES 221 ENSGT00940000154461.tc.b.b.b ENSGT00950000182870.a.a.a.b.k.a ENSGT00950000182971.C.pc.a ENSGT00940000159594.d ENSGT00950000182940.b.b.f.g ENSGT00940000155123.b.b.a ENSGT00940000155305.b.b.a ENSGT00940000161373.ab ENSGT01090000260030.a.b.a.a.b.b.a.a.b ENSGT00940000155301.a.a.a ENSGT01030000234535.E.d.e.a ENSGT00950000183103.d.a.b.h ENSGT00390000016258.e.a ENSGT01030000234618.E.k ENSGT00940000156170.k.a ENSGT00940000159129.eb.b #22 ENSGT00940000167600.a ENSGT00940000157449.c #24 ENSGT00390000001566.d ENSGT00390000009313.ib.b.b.a.a ENSGT00390000009313.ib.b.a.e.a.b.a ENSGT00940000158581.r ENSGT00940000155301.a.a.b ENSGT01030000234535.E.d.f ENSGT00950000183103.d.a.b.g ENSGT00390000016258.e.b ENSGT01030000234618.E.j.a ENSGT00940000156170.k.b ENSGT00940000159129.eb.a #22 ENSGT00940000167600.b ENSGT00940000157449.d #24 Goldfish MODERN SPECIES 13 ENSCARG00000012461 ENSCARG00000012455 ENSCARG00000012447 ENSCARG00000012441 ENSCARG00000012434 add1 (ENSCARG00000012351) ENSCARG00000012334 ENSCARG00000012328 WDR7 (ENSCARG00000012136) st8sia3 (ENSCARG00000012092) ONECUT2 (ENSCARG00000012082) fech (ENSCARG00000012043) NARS1 (ENSCARG00000011101) txnl1 (ENSCARG00000011037) kcne4 (ENSCARG00000011028) TCF4 (ENSCARG00000010976) #22 ENSCARG00000010949 RAB27B (ENSCARG00000010942) #24 wdr91 (ENSCARG00000010876) vmo1b (ENSCARG00000010849) ENSCARG00000010838 ENSCARG00000010830 ENSCARG00000010824 ENSCARG00000010810 ENSCARG00000010787 ENSCARG00000010780 zgc:152948 (ENSCARG00000010771) #26 ENSCARG00000010572 ENSCARG00000010556 ENSCARG00000010531 RIC1 (ENSCARG00000009824) Cyprininae_a ANCESTRAL SPECIES 497 ENSGT01030000234535.E.d.e.a ENSGT00950000183103.d.a.b.h ENSGT00390000016258.e.a ENSGT01030000234618.E.k ENSGT00940000156170.k.a ENSGT00940000159129.eb.b #22 ENSGT00940000167600.a ENSGT00940000157449.c #24 ENSGT00390000001566.d ENSGT00390000009313.ib.b.b.a.a ENSGT00390000009313.ib.b.a.e.a.a.a ENSGT00390000009313.ib.b.a.e.a.b.a ENSGT00390000009313.ib.b.a.e.b.a.b ENSGT00390000008823.b #26 ENSGT00940000153372.A.e.a.a.b Common carp reference MODERN SPECIES 45 ENSCCRG00000053843 ENSCCRG00000028266 ENSCCRG00000054979 ENSCCRG00000053189 ENSCCRG00000069742 ENSCCRG00000071657 ENSCCRG00000063029 ENSCCRG00000066591 ENSCCRG00000013669 WDR7 (ENSCCRG00000032528) st8sia3 (ENSCCRG00000062633) ONECUT2 (ENSCCRG00000028698) fech (ENSCCRG00000019277) NARS1 (ENSCCRG00000019190) TXNL1 (ENSCCRG00000021434) ENSCCRG00000034571 #22 ENSCCRG00000056584 RAB27B (ENSCCRG00000003257) #24 wdr91 (ENSCCRG00000029465) ENSCCRG00000013868 ENSCCRG00000081327 ENSCCRG00000029481 ENSCCRG00000000461 ENSCCRG00000081602 ENSCCRG00000055425 ENSCCRG00000077443 ENSCCRG00000066445 zgc:152948 (ENSCCRG00000029498) #26 ENSCCRG00000029501 ENSCCRG00000061694 ENSCCRG00000028587 Golden-line barbel MODERN SPECIES 862 TCF4 (ENSSGRG00000035271) #22 RAB27B (ENSSGRG00000035236) #24 wdr91 (ENSSGRG00000035235) ENSSGRG00000035234 ENSSGRG00000035232 zgc:152948 (ENSSGRG00000035231) #26 ENSSGRG00000035230 ENSSGRG00000035228 ENSSGRG00000035227 ENSSGRG00000035226 Characiphysae ANCESTRAL SPECIES 156 ENSGT01030000234618.E.l ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449 #24 ENSGT00390000001566 ENSGT00390000009313.ib.b.b.a ENSGT00390000009313.ib.b.a ENSGT00390000008823 #26 ENSGT00940000153372.A.e.a.a ENSGT01030000235124 ENSGT00940000153372.A.e.a.b.b ENSGT00390000018741 ENSGT00390000002955 ENSGT00530000063839 ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b Channel catfish MODERN SPECIES 9 ENSIPUG00000007004 dnlz (ENSIPUG00000007022) Lrrc8a (ENSIPUG00000007037) phyhd1 (ENSIPUG00000007062) dolk (ENSIPUG00000007099) NUP188 (ENSIPUG00000007115) ENSIPUG00000007201 lhx5 (ENSIPUG00000007216) mzt2 (ENSIPUG00000007238) ENSIPUG00000007262 tnfrsfa (ENSIPUG00000007274) unc5da (ENSIPUG00000007298) Aqp3 (ENSIPUG00000007335) nars (ENSIPUG00000007374) txnl1 (ENSIPUG00000007474) tcf4 (ENSIPUG00000007620) #22 ENSIPUG00000007743 rab27b (ENSIPUG00000007787) #24 wdr91 (ENSIPUG00000007862) ENSIPUG00000007901 VMO1 (ENSIPUG00000007908) ENSIPUG00000007927 ENSIPUG00000007947 vmo1b (ENSIPUG00000007974) ENSIPUG00000008035 c18h18orf54 (ENSIPUG00000008059) #26 Scarb2 (ENSIPUG00000008102) ENSIPUG00000008139 ENSIPUG00000008153 C18orf32 (ENSIPUG00000008171) ric1 (ENSIPUG00000008210) Characiphysae_b ANCESTRAL SPECIES 158 ENSGT01030000234618.E.l ENSGT01030000234618.E.m ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449 #24 ENSGT00390000001566 ENSGT00390000009313.ib.b.a ENSGT00950000183007.b.e.b.a ENSGT00390000009313.ib.b.b.a ENSGT00390000008823 #26 ENSGT00940000153372.A.e.a.a ENSGT01030000235124 ENSGT00940000153372.A.e.a.b.b ENSGT00390000018741 ENSGT00390000002955 ENSGT00530000063839 ENSGT00390000009531 ENSGT00390000011483 Electric eel MODERN SPECIES 1209 TCF4 (ENSEEEG00000018249) #22 Characoidei ANCESTRAL SPECIES 394 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT00940000157449 #24 ENSGT00390000001566 ENSGT00390000009313.ib.b.a.c Red-bellied piranha MODERN SPECIES 1062 TCF4 (ENSPNAG00000011722) #22 Mexicana tetra MODERN SPECIES 5 ENSAMXG00000037107 ENSAMXG00000025173 zgc:110782 (ENSAMXG00000030905) ENSAMXG00000040749 slc8a4a (ENSAMXG00000007314) ppp1r14ba (ENSAMXG00000033599) fkbp2 (ENSAMXG00000007326) ENSAMXG00000038620 ENSAMXG00000007332 ENSAMXG00000042704 aqp3b (ENSAMXG00000001334) ENSAMXG00000032351 NARS1 (ENSAMXG00000009766) txnl1 (ENSAMXG00000037917) ENSAMXG00000038338 TCF4 (ENSAMXG00000009833) #22 ENSAMXG00000009861 RAB27B (ENSAMXG00000032740) #24 wdr91 (ENSAMXG00000009885) ENSAMXG00000044107 ENSAMXG00000043302 ENSAMXG00000032249 naga (ENSAMXG00000038549) ENSAMXG00000031358 ENSAMXG00000033538 vmo1b (ENSAMXG00000034013) irge4 (ENSAMXG00000025551) ENSAMXG00000037024 ENSAMXG00000034291 zgc:152948 (ENSAMXG00000009972) #26 ENSAMXG00000009983 Clupeiformes ANCESTRAL SPECIES 12 ENSGT01030000235124 ENSGT00940000153372.A.e.a.a ENSGT00390000007731 ENSGT00940000157778 ENSGT00950000183003.a.a.a.a.a ENSGT00940000154827 ENSGT00940000156423.j ENSGT00390000010767 ENSGT00940000158002 ENSGT00940000155301.a ENSGT01030000234535.E.d ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00940000156170 ENSGT00940000159129 #22 ENSGT00940000167600 ENSGT01020000230359.E ENSGT00940000157449 #24 ENSGT00390000001566 ENSGT00390000008823 #26 ENSGT00940000157321 ENSGT00940000156290.b ENSGT01070000253744.b.b.f ENSGT00940000154821.a.a ENSGT00940000154886.a.b ENSGT01050000244898.b.b.e.b ENSGT00940000155133.b ENSGT00940000153692.A ENSGT00950000183015.D ENSGT00390000018810 Denticle herring MODERN SPECIES 13 ENSDCDG00000035747 SCARB2 (ENSDCDG00000035746) ENSDCDG00000035743 SHROOM3 (ENSDCDG00000035740) ENSDCDG00000035739 ccni (ENSDCDG00000035737) ccng2 (ENSDCDG00000035736) ENSDCDG00000035734 ATP8B1 (ENSDCDG00000035667) WDR7 (ENSDCDG00000035626) st8sia3 (ENSDCDG00000035613) ONECUT2 (ENSDCDG00000035612) fech (ENSDCDG00000035606) NARS1 (ENSDCDG00000035568) txnl1 (ENSDCDG00000035540) TCF4 (ENSDCDG00000035529) #22 ENSDCDG00000035517 ENSDCDG00000035512 SLC10A6 (ENSDCDG00000035509) ENSDCDG00000035508 sdad1 (ENSDCDG00000035503) golga7 (ENSDCDG00000035497) ENSDCDG00000035492 sfrp1b (ENSDCDG00000035490) ENSDCDG00000035486 ENSDCDG00000035482 ppp3ccb (ENSDCDG00000035413) ENSDCDG00000035397 dmtn (ENSDCDG00000035396) pbdc1 (ENSDCDG00000035393) xpo7 (ENSDCDG00000035325) Atlantic herring MODERN SPECIES 3 ENSCHAG00000013789 oaz1b (ENSCHAG00000013807) ENSCHAG00000013951 ENSCHAG00000013995 ENSCHAG00000014013 ENSCHAG00000014023 ccng2 (ENSCHAG00000014054) ccni (ENSCHAG00000014086) ENSCHAG00000014356 SHROOM3 (ENSCHAG00000014395) ENSCHAG00000014530 SCARB2 (ENSCHAG00000014549) ENSCHAG00000014650 ENSCHAG00000014662 txnl1 (ENSCHAG00000014836) TCF4 (ENSCHAG00000014900) #22 ENSCHAG00000015409 acadl (ENSCHAG00000015439) MPC2 (ENSCHAG00000015960) RAB27B (ENSCHAG00000015976) #24 wdr91 (ENSCHAG00000016022) zgc:152948 (ENSCHAG00000016082) #26 dck (ENSCHAG00000016094) ENSCHAG00000016237 NPFFR2 (ENSCHAG00000018883) ENSCHAG00000019237 ENSCHAG00000019248 mob1bb (ENSCHAG00000019337) ptpn13 (ENSCHAG00000019401) mapk10 (ENSCHAG00000020156) ARHGAP24 (ENSCHAG00000021267)