Eutheria	ANCESTRAL SPECIES	3	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552 #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.v.a ##33	ENSGT00530000063866 #32	ENSGT00390000013802.v.b #33	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.b
Primates	ANCESTRAL SPECIES		ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.v.b #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a	ENSGT00950000182841.b.a.a.b.b
Haplorrhini	ANCESTRAL SPECIES		ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.v.a ##33	ENSGT00390000013802.v.b #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a
Simiiformes	ANCESTRAL SPECIES		ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x #27	ENSGT00940000154902.bb.b ##28	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.v.a ##33	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.b.c #33	ENSGT00530000063866.c.a #34	ENSGT00390000013802.v.b.d #35
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00940000153052.c.a.a #31	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.b.c #33	ENSGT00390000013802.v.a ##33	ENSGT00530000063866.c.a #34
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615.o.a #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.v.a ##33	ENSGT00940000153052.c.a.a.a #31	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.b.c #33	ENSGT00530000063866.c.a #34
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615.o.a #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.v.a ##33	ENSGT00940000153052.c.a.a.a #31	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.b.c #33	ENSGT00530000063866.c.a #34
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615.o.a #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00940000153052.c.a.a.a #31	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.b.c #33	ENSGT00390000013802.v.a ##33	ENSGT00530000063866.c.a #34
Cercopithecinae_b	ANCESTRAL SPECIES	16	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615.o.a #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x #27	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00940000153052.c.a.a.a #31	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.b.c #33	ENSGT00390000013802.v.a ##33	ENSGT00530000063866.c.a #34	ENSGT00390000013802.v.b.d #35
Cercopithecinae_d	ANCESTRAL SPECIES	6	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615.o.a #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00940000153052.c.a.a.a #31	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.b.c #33	ENSGT00530000063866.c.a #34	ENSGT00390000013802.v.b.d #35	ENSGT00530000063866.d #36
Drill	MODERN SPECIES	1111	NXF1 (ENSMLEG00000026574) #7	TMEM179B (ENSMLEG00000039000) #8	TAF6L (ENSMLEG00000032444) #9	POLR2G (ENSMLEG00000032928) #10	ZBTB3 (ENSMLEG00000042521) #11	TTC9C (ENSMLEG00000036250) #12	HNRNPUL2 (ENSMLEG00000033906) #13	GNG3 (ENSMLEG00000039091) #14	BSCL2 (ENSMLEG00000037535) #15	LRRN4CL (ENSMLEG00000006668) #16	UBXN1 (ENSMLEG00000027508) #17	UQCC3 (ENSMLEG00000042115) #18	CSKMT (ENSMLEG00000029829) #19	ENSMLEG00000024134 #20	INTS5 (ENSMLEG00000036338) #21	GANAB (ENSMLEG00000035204) #22	B3GAT3 (ENSMLEG00000032645) #23	ROM1 (ENSMLEG00000005548) #24	EML3 (ENSMLEG00000031847) #25	TUT1 (ENSMLEG00000040498) #26	EEF1G (ENSMLEG00000023252) #27	ENSMLEG00000027464 #28	SCGB1A1 (ENSMLEG00000043598) #29	ASRGL1 (ENSMLEG00000043526) #30	ENSMLEG00000039578 #31	SCGB1D4 (ENSMLEG00000033831) #32	ENSMLEG00000029127 #33	SCGB1D2 (ENSMLEG00000035930) #34	SCGB2A1 (ENSMLEG00000035453) #35	SCGB1D1 (ENSMLEG00000042430) #36	INCENP (ENSMLEG00000043817) #37
Sooty mangabey	MODERN SPECIES	518	TMEM223 (ENSCATG00000034294)	TMEM179B (ENSCATG00000036661) #8	TAF6L (ENSCATG00000031925) #9	POLR2G (ENSCATG00000034443) #10	ZBTB3 (ENSCATG00000034435) #11	TTC9C (ENSCATG00000035217) #12	HNRNPUL2 (ENSCATG00000034588) #13	BSCL2 (ENSCATG00000037983) #15	GNG3 (ENSCATG00000038843) #14	LRRN4CL (ENSCATG00000003551) #16	UBXN1 (ENSCATG00000036706) #17	UQCC3 (ENSCATG00000015726) #18	LBHD1 (ENSCATG00000037717)	CSKMT (ENSCATG00000035188) #19	INTS5 (ENSCATG00000032127) #21	GANAB (ENSCATG00000037474) #22	B3GAT3 (ENSCATG00000043834) #23	ROM1 (ENSCATG00000043968) #24	EML3 (ENSCATG00000043181) #25	MTA2 (ENSCATG00000037060)	TUT1 (ENSCATG00000036770) #26	EEF1G (ENSCATG00000038495) #27	AHNAK (ENSCATG00000038864) ##28	SCGB1A1 (ENSCATG00000038223) #29	ASRGL1 (ENSCATG00000038215) #30	ENSCATG00000036822 #31	SCGB1D4 (ENSCATG00000037621) #32	ENSCATG00000043571 #33	SCGB1D2 (ENSCATG00000037575) #34	SCGB2A1 (ENSCATG00000043661) #35	SCGB1D1 (ENSCATG00000037601) #36
Olive baboon	MODERN SPECIES	3	TMEM223 (ENSPANG00000012314)	TMEM179B (ENSPANG00000021117) #8	TAF6L (ENSPANG00000013647) #9	POLR2G (ENSPANG00000037490) #10	ZBTB3 (ENSPANG00000008469) #11	TTC9C (ENSPANG00000039235) #12	HNRNPUL2 (ENSPANG00000023745) #13	GNG3 (ENSPANG00000042558) #14	BSCL2 (ENSPANG00000011406) #15	LRRN4CL (ENSPANG00000003479) #16	UBXN1 (ENSPANG00000005453) #17	UQCC3 (ENSPANG00000035430) #18	CSKMT (ENSPANG00000046328) #19	C11orf98 (ENSPANG00000007575) #20	ENSPANG00000040911 #21	GANAB (ENSPANG00000010909) #22	B3GAT3 (ENSPANG00000005376) #23	ROM1 (ENSPANG00000015653) #24	EML3 (ENSPANG00000012313) #25	MTA2 (ENSPANG00000005452)	TUT1 (ENSPANG00000010908) #26	EEF1G (ENSPANG00000003106) #27	ENSPANG00000037028 #28	SCGB1A1 (ENSPANG00000019204) #29	ASRGL1 (ENSPANG00000011234) #30	SCGB2A2 (ENSPANG00000032557) ##33	SCGB1D2 (ENSPANG00000016130) #34	SCGB2A1 (ENSPANG00000046637) #35	SCGB1D1 (ENSPANG00000016660) #36	INCENP (ENSPANG00000016661) #37	ENSPANG00000032665
Macaca	ANCESTRAL SPECIES	2	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615.o.a #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00940000153052.c.a.a.a #31	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.b.c #33	ENSGT00530000063866.c.a #34	ENSGT00390000013802.v.b.d #35
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00940000161627.a.a.a.a.b.a.a.a.b.c.a.a.b.b	ENSGT00510000049875 #19	ENSGT00390000002615.o.a #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00530000063866.c.b #32	ENSGT00530000063866.c.a #34	ENSGT00390000013802.v.b.d #35	ENSGT00530000063866.d #36	ENSGT00730000111073 #37	ENSGT01100000263493.a.b.a.a.a.a.a.a.a.a.b.b.a.b.b.a
Crab-eating macaque	MODERN SPECIES	5	TMEM179B (ENSMFAG00000037362) #8	TAF6L (ENSMFAG00000030912) #9	POLR2G (ENSMFAG00000033674) #10	ZBTB3 (ENSMFAG00000003520) #11	TTC9C (ENSMFAG00000036997) #12	HNRNPUL2 (ENSMFAG00000041014) #13	ENSMFAG00000039354 #14	BSCL2 (ENSMFAG00000031001) #15	LRRN4CL (ENSMFAG00000049892) #16	UBXN1 (ENSMFAG00000045415) #17	ENSMFAG00000051023	ENSMFAG00000061333	CSKMT (ENSMFAG00000032323) #19	C11orf98 (ENSMFAG00000003562) #20	INTS5 (ENSMFAG00000031212) #21	GANAB (ENSMFAG00000045211) #22	B3GAT3 (ENSMFAG00000037575) #23	ROM1 (ENSMFAG00000002310) #24	EML3 (ENSMFAG00000037614) #25	MTA2 (ENSMFAG00000041694)	TUT1 (ENSMFAG00000000912) #26	ENSMFAG00000007224 #27	ENSMFAG00000037659 #28	SCGB1A1 (ENSMFAG00000043963) #29	ASRGL1 (ENSMFAG00000036351) #30	ENSMFAG00000060551	SCGB1D4 (ENSMFAG00000000615) #32	SCGB1D2 (ENSMFAG00000032089) #34	SCGB2A1 (ENSMFAG00000002274) #35	SCGB1D1 (ENSMFAG00000032054) #36	INCENP (ENSMFAG00000031558) #37
Rhesus	MODERN SPECIES	5	NXF1 (ENSMMUG00000000188) #7	TMEM223 (ENSMMUG00000023094)	TMEM179B (ENSMMUG00000003682) #8	TAF6L (ENSMMUG00000000110) #9	POLR2G (ENSMMUG00000014368) #10	ZBTB3 (ENSMMUG00000056054) #11	TTC9C (ENSMMUG00000039671) #12	HNRNPUL2 (ENSMMUG00000051635) #13	BSCL2 (ENSMMUG00000014363) #15	GNG3 (ENSMMUG00000042036) #14	LRRN4CL (ENSMMUG00000031129) #16	UBXN1 (ENSMMUG00000005761) #17	ENSMMUG00000059843	CSKMT (ENSMMUG00000046328) #19	INTS5 (ENSMMUG00000013949) #21	GANAB (ENSMMUG00000018117) #22	B3GAT3 (ENSMMUG00000031126) #23	ROM1 (ENSMMUG00000059876) #24	EML3 (ENSMMUG00000018112) #25	MTA2 (ENSMMUG00000018110)	TUT1 (ENSMMUG00000006595) #26	EEF1G (ENSMMUG00000006598) #27	AHNAK (ENSMMUG00000022301) ##28	SCGB1A1 (ENSMMUG00000031123) #29	ASRGL1 (ENSMMUG00000013831) #30	SCGB1D4 (ENSMMUG00000058338) #32	SCGB1D2 (ENSMMUG00000004424) #34	SCGB2A1 (ENSMMUG00000054866) #35	SCGB1D1 (ENSMMUG00000062870) #36	INCENP (ENSMMUG00000004420) #37	ENSMMUG00000062874
Pig-tailed macaque	MODERN SPECIES	433	TMEM223 (ENSMNEG00000030390)	TMEM179B (ENSMNEG00000000022) #8	TAF6L (ENSMNEG00000031769) #9	POLR2G (ENSMNEG00000041523) #10	ZBTB3 (ENSMNEG00000032222) #11	TTC9C (ENSMNEG00000038138) #12	HNRNPUL2 (ENSMNEG00000036955) #13	GNG3 (ENSMNEG00000041074) #14	BSCL2 (ENSMNEG00000027955) #15	LRRN4CL (ENSMNEG00000008801) #16	UBXN1 (ENSMNEG00000023355) #17	UQCC3 (ENSMNEG00000009079) #18	CSKMT (ENSMNEG00000032750) #19	ENSMNEG00000031419 #20	INTS5 (ENSMNEG00000009187) #21	GANAB (ENSMNEG00000044710) #22	B3GAT3 (ENSMNEG00000018264) #23	ROM1 (ENSMNEG00000040388) #24	EML3 (ENSMNEG00000035836) #25	MTA2 (ENSMNEG00000041381)	TUT1 (ENSMNEG00000029841) #26	ENSMNEG00000044626 #27	ENSMNEG00000039903 ##28	ENSMNEG00000043224 #28	SCGB1A1 (ENSMNEG00000030793) #29	ASRGL1 (ENSMNEG00000044187) #30	ENSMNEG00000017421 #31	SCGB1D4 (ENSMNEG00000029024) #32	ENSMNEG00000039066 #33	SCGB1D2 (ENSMNEG00000038358) #34	SCGB2A1 (ENSMNEG00000036574) #35
Vervet Monkey	MODERN SPECIES		NXF1 (ENSCSAG00000006739) #7	TMEM223 (ENSCSAG00000006730)	TMEM179B (ENSCSAG00000006726) #8	TAF6L (ENSCSAG00000006720) #9	POLR2G (ENSCSAG00000006715) #10	ZBTB3 (ENSCSAG00000006712) #11	TTC9C (ENSCSAG00000006708) #12	HNRNPUL2 (ENSCSAG00000006701) #13	GNG3 (ENSCSAG00000006696) #14	BSCL2 (ENSCSAG00000006684) #15	LRRN4CL (ENSCSAG00000019176) #16	UBXN1 (ENSCSAG00000006659) #17	UQCC3 (ENSCSAG00000006653) #18	CSKMT (ENSCSAG00000006647) #19	INTS5 (ENSCSAG00000006644) #21	GANAB (ENSCSAG00000006636) #22	B3GAT3 (ENSCSAG00000006625) #23	ROM1 (ENSCSAG00000006620) #24	EML3 (ENSCSAG00000006615) #25	MTA2 (ENSCSAG00000006593)	TUT1 (ENSCSAG00000006566) #26	EEF1G (ENSCSAG00000006560) #27	AHNAK (ENSCSAG00000006556) ##28	SCGB1A1 (ENSCSAG00000006546) #29	ASRGL1 (ENSCSAG00000006542) #30	SCGB1D4 (ENSCSAG00000006534) #32	ENSCSAG00000006528 #33	SCGB1D2 (ENSCSAG00000006525) #34	SCGB2A1 (ENSCSAG00000006522) #35	SCGB1D1 (ENSCSAG00000006515) #36	INCENP (ENSCSAG00000006508) #37
Rhinopithecus	ANCESTRAL SPECIES	15	ENSGT00390000007539.i.a #7	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B.e.b #14	ENSGT00390000011639 #15	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615.o.a #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x.y.b #27	ENSGT00390000007552.f.x.y.a #27	ENSGT00940000154902.bb.b ##28	ENSGT01090000263362	ENSGT00950000183045.A.a.a #30	ENSGT00940000153052.c.a.a.a #31	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.b.c #33	ENSGT00530000063866.c.a #34	ENSGT00390000013802.v.b.d #35
Golden snub-nosed monkey	MODERN SPECIES	2511	NXF1 (ENSRROG00000044145) #7	TMEM223 (ENSRROG00000034260)	TMEM179B (ENSRROG00000001174) #8	TAF6L (ENSRROG00000000495) #9	POLR2G (ENSRROG00000033543) #10	ZBTB3 (ENSRROG00000038933) #11	TTC9C (ENSRROG00000035353) #12	HNRNPUL2 (ENSRROG00000036561) #13	BSCL2 (ENSRROG00000036969) #15	GNG3 (ENSRROG00000037172) #14	UBXN1 (ENSRROG00000040915) #17	UQCC3 (ENSRROG00000007192) #18	CSKMT (ENSRROG00000027675) #19	ENSRROG00000044930 #20	INTS5 (ENSRROG00000042424) #21	GANAB (ENSRROG00000037256) #22	B3GAT3 (ENSRROG00000029771) #23	ROM1 (ENSRROG00000033061) #24	EML3 (ENSRROG00000043037) #25	MTA2 (ENSRROG00000044052)	TUT1 (ENSRROG00000043315) #26	ENSRROG00000042836 #27	AHNAK (ENSRROG00000044889) ##28	ENSRROG00000045117	ASRGL1 (ENSRROG00000031523) #30	SCGB1D4 (ENSRROG00000039995) #32	ENSRROG00000044482 #33	SCGB1D2 (ENSRROG00000031331) #34	SCGB2A1 (ENSRROG00000044015) #35	SCGB1D1 (ENSRROG00000036655) #36	ENSRROG00000036187
Black snub-nosed monkey	MODERN SPECIES	600	TMEM223 (ENSRBIG00000040267)	TMEM179B (ENSRBIG00000036204) #8	TAF6L (ENSRBIG00000036681) #9	ENSRBIG00000030312	POLR2G (ENSRBIG00000009173) #10	ZBTB3 (ENSRBIG00000036228) #11	TTC9C (ENSRBIG00000044503) #12	HNRNPUL2 (ENSRBIG00000037820) #13	BSCL2 (ENSRBIG00000040625) #15	ENSRBIG00000036927 #14	UBXN1 (ENSRBIG00000028404) #17	UQCC3 (ENSRBIG00000038515) #18	CSKMT (ENSRBIG00000037785) #19	ENSRBIG00000030851 #20	INTS5 (ENSRBIG00000045006) #21	GANAB (ENSRBIG00000040636) #22	B3GAT3 (ENSRBIG00000012660) #23	ROM1 (ENSRBIG00000033282) #24	EML3 (ENSRBIG00000029464) #25	MTA2 (ENSRBIG00000038336)	TUT1 (ENSRBIG00000021240) #26	ENSRBIG00000042208 #27	ENSRBIG00000032801 ##28	ENSRBIG00000037491	ASRGL1 (ENSRBIG00000008615) #30	ENSRBIG00000027474 #31	ENSRBIG00000026802	SCGB1D4 (ENSRBIG00000044615) #32	ENSRBIG00000039690 #33	SCGB1D2 (ENSRBIG00000032475) #34	SCGB2A1 (ENSRBIG00000041379) #35
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954.k.a #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00940000153052.c.a.a.c #31	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.a ##33	ENSGT00530000063866.c.a #34	ENSGT00390000013802.v.b.d #35	ENSGT00530000063866.d #36
Hominidae	ANCESTRAL SPECIES	1	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954.k.a #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00940000153052.c.a.a.c #31	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.a ##33	ENSGT00530000063866.c.a #34	ENSGT00390000013802.v.b.d #35	ENSGT00530000063866.d #36
Homo/Pan/Gorilla group	DUPLICATION
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000008374 #21	ENSGT00940000159139.e #22	ENSGT00940000156954.k.a #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x.h.a #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00940000153052.c.a.a.c #31	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.a ##33	ENSGT00530000063866.c.a #34	ENSGT00390000013802.v.b.d #35	ENSGT00530000063866.d #36
Gorilla	MODERN SPECIES	2	NXF1 (ENSGGOG00000001911) #7	TMEM223 (ENSGGOG00000001910)	TMEM179B (ENSGGOG00000001907) #8	TAF6L (ENSGGOG00000011807) #9	POLR2G (ENSGGOG00000011739) #10	ZBTB3 (ENSGGOG00000011735) #11	TTC9C (ENSGGOG00000011733) #12	HNRNPUL2 (ENSGGOG00000011722) #13	GNG3 (ENSGGOG00000003199) #14	BSCL2 (ENSGGOG00000003195) #15	UBXN1 (ENSGGOG00000005047) #17	ENSGGOG00000027467 #18	CSKMT (ENSGGOG00000027342) #19	LBHD1 (ENSGGOG00000005043)	INTS5 (ENSGGOG00000026126) #21	GANAB (ENSGGOG00000013611) #22	EML3 (ENSGGOG00000013581) #25	ROM1 (ENSGGOG00000013599) #24	MTA2 (ENSGGOG00000013570)	TUT1 (ENSGGOG00000013564) #26	ENSGGOG00000013557 #27	ENSGGOG00000026177 ##28	SCGB1A1 (ENSGGOG00000001795) #29	ENSGGOG00000023746 #31	SCGB1D4 (ENSGGOG00000000819) #32	SCGB2A2 (ENSGGOG00000006347) ##33	SCGB1D2 (ENSGGOG00000026258) #34	SCGB2A1 (ENSGGOG00000022202) #35	SCGB1D1 (ENSGGOG00000015681) #36	ENSGGOG00000041256	INCENP (ENSGGOG00000014193) #37
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000008374 #21	ENSGT00940000159139.e #22	ENSGT00940000156954.k.a #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x.h.a #27	ENSGT00390000007552.f.x.i #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00940000153052.c.a.a.c #31	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.a ##33	ENSGT00530000063866.c.a #34	ENSGT00390000013802.v.b.d #35
Pan	ANCESTRAL SPECIES	1	ENSGT00390000007539.i.a #7	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000008374 #21	ENSGT00940000159139.e #22	ENSGT00940000156954.k.a #23	ENSGT00940000159139.f #22	ENSGT00940000156954.l #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x.h.a #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00940000153052.c.a.a.c #31	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.a ##33	ENSGT00530000063866.c.a #34
Chimpanzee	MODERN SPECIES	2	NXF1 (ENSPTRG00000003791) #7	TMEM223 (ENSPTRG00000003790)	TMEM179B (ENSPTRG00000003789) #8	TAF6L (ENSPTRG00000003787) #9	ENSPTRG00000050327	ZBTB3 (ENSPTRG00000003785) #11	TTC9C (ENSPTRG00000023824) #12	HNRNPUL2 (ENSPTRG00000034359) #13	GNG3 (ENSPTRG00000003783) #14	BSCL2 (ENSPTRG00000003784) #15	UBXN1 (ENSPTRG00000003780) #17	UQCC3 (ENSPTRG00000028607) #18	CSKMT (ENSPTRG00000034411) #19	LBHD1 (ENSPTRG00000049492)	INTS5 (ENSPTRG00000003777) #21	GANAB (ENSPTRG00000003776) #22	B3GAT3 (ENSPTRG00000039665) #23	ROM1 (ENSPTRG00000003773) #24	ENSPTRG00000003772 #25	MTA2 (ENSPTRG00000003771)	TUT1 (ENSPTRG00000003770) #26	EEF1G (ENSPTRG00000003768) #27	AHNAK (ENSPTRG00000003766) ##28	SCGB1A1 (ENSPTRG00000003765) #29	ASRGL1 (ENSPTRG00000003764) #30	ENSPTRG00000047416 #31	SCGB1D4 (ENSPTRG00000050005) #32	SCGB2A2 (ENSPTRG00000003763) ##33	SCGB1D2 (ENSPTRG00000023215) #34	SCGB2A1 (ENSPTRG00000003762) #35	SCGB1D1 (ENSPTRG00000003761) #36
Bonobo	MODERN SPECIES	2	NXF1 (ENSPPAG00000041498) #7	TMEM179B (ENSPPAG00000038907) #8	TMEM223 (ENSPPAG00000035801)	TAF6L (ENSPPAG00000009707) #9	POLR2G (ENSPPAG00000039868) #10	ZBTB3 (ENSPPAG00000031673) #11	TTC9C (ENSPPAG00000030010) #12	ENSPPAG00000041471	GNG3 (ENSPPAG00000032105) #14	BSCL2 (ENSPPAG00000042902) #15	UBXN1 (ENSPPAG00000036691) #17	ENSPPAG00000012147 #18	CSKMT (ENSPPAG00000029192) #19	LBHD1 (ENSPPAG00000031864)	INTS5 (ENSPPAG00000028305) #21	GANAB (ENSPPAG00000043210) #22	B3GAT3 (ENSPPAG00000016802) #23	ROM1 (ENSPPAG00000035434) #24	EML3 (ENSPPAG00000031717) #25	TUT1 (ENSPPAG00000037200) #26	ENSPPAG00000043560 #27	ENSPPAG00000044021 ##28	SCGB1A1 (ENSPPAG00000037115) #29	ASRGL1 (ENSPPAG00000037527) #30	ENSPPAG00000043065 #31	SCGB1D4 (ENSPPAG00000020935) #32	SCGB2A2 (ENSPPAG00000039013) ##33	SCGB1D2 (ENSPPAG00000011860) #34	SCGB2A1 (ENSPPAG00000040636) #35	SCGB1D1 (ENSPPAG00000038178) #36	INCENP (ENSPPAG00000020765) #37
Human	MODERN SPECIES	2	TAF6L (ENSG00000162227) #9	POLR2G (ENSG00000168002) #10	ZBTB3 (ENSG00000185670) #11	TTC9C (ENSG00000162222) #12	HNRNPUL2 (ENSG00000214753) #13	GNG3 (ENSG00000162188) #14	BSCL2 (ENSG00000168000) #15	LRRN4CL (ENSG00000177363) #16	UBXN1 (ENSG00000162191) #17	UQCC3 (ENSG00000204922) #18	CSKMT (ENSG00000214756) #19	LBHD1 (ENSG00000162194)	C11orf98 (ENSG00000278615) #20	ENSG00000255432	INTS5 (ENSG00000185085) #21	GANAB (ENSG00000089597) #22	B3GAT3 (ENSG00000149541) #23	ROM1 (ENSG00000149489) #24	EML3 (ENSG00000149499) #25	MTA2 (ENSG00000149480)	TUT1 (ENSG00000149016) #26	EEF1G (ENSG00000254772) #27	AHNAK (ENSG00000124942) ##28	SCGB1A1 (ENSG00000149021) #29	ASRGL1 (ENSG00000162174) #30	SCGB1D4 (ENSG00000197745) #32	SCGB2A2 (ENSG00000110484) ##33	SCGB1D2 (ENSG00000124935) #34	SCGB2A1 (ENSG00000124939) #35	SCGB1D1 (ENSG00000168515) #36	INCENP (ENSG00000149503) #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	86																ENSGT00940000159139.f #22	ENSGT00940000156954.l #23
Homo/Pan group	ANCESTRAL SPECIES	86																ENSGT00940000159139.f #22	ENSGT00940000156954.l #23
Pan	ANCESTRAL SPECIES	1	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000008374 #21	ENSGT00940000159139.e #22	ENSGT00940000156954.k.a #23	ENSGT00940000159139.f #22	ENSGT00940000156954.l #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x.h.a #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00940000153052.c.a.a.c #31	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.a ##33	ENSGT00530000063866.c.a #34	ENSGT00390000013802.v.b.d #35	ENSGT00530000063866.d #36
Chimpanzee	MODERN SPECIES	409																ENSPTRG00000050814 #22	ENSPTRG00000045944 #23	ENSPTRG00000050642 #24	ENSPTRG00000046495 #25	ENSPTRG00000048622
Orangutan	MODERN SPECIES	2	TMEM223 (ENSPPYG00000003144)	TMEM179B (ENSPPYG00000003145) #8	TAF6L (ENSPPYG00000003146) #9	ENSPPYG00000003147 #10	ZBTB3 (ENSPPYG00000003148) #11	TTC9C (ENSPPYG00000030629) #12	HNRNPUL2 (ENSPPYG00000029773) #13	GNG3 (ENSPPYG00000003150) #14	BSCL2 (ENSPPYG00000038932) #15	LRRN4CL (ENSPPYG00000003152) #16	UBXN1 (ENSPPYG00000003153) #17	ENSPPYG00000003154 #18	LBHD1 (ENSPPYG00000003155)	CSKMT (ENSPPYG00000003156) #19	INTS5 (ENSPPYG00000003157) #21	GANAB (ENSPPYG00000003158) #22	B3GAT3 (ENSPPYG00000025907) #23	ROM1 (ENSPPYG00000003159) #24	EML3 (ENSPPYG00000003160) #25	MTA2 (ENSPPYG00000003161)	TUT1 (ENSPPYG00000003162) #26	EEF1G (ENSPPYG00000029434) #27	ENSPPYG00000035391 #28	SCGB1A1 (ENSPPYG00000003165) #29	ASRGL1 (ENSPPYG00000003166) #30	ENSPPYG00000034057	ENSPPYG00000038729	ENSPPYG00000003168 ##33	SCGB1D2 (ENSPPYG00000003169) #34	SCGB2A1 (ENSPPYG00000003170) #35	SCGB1D1 (ENSPPYG00000025908) #36
Gibbon	MODERN SPECIES	19	TMEM223 (ENSNLEG00000004119)	TMEM179B (ENSNLEG00000036102) #8	TAF6L (ENSNLEG00000032645) #9	ENSNLEG00000004097 #10	ZBTB3 (ENSNLEG00000031633) #11	ENSNLEG00000034047 #12	HNRNPUL2 (ENSNLEG00000004077) #13	GNG3 (ENSNLEG00000004072) #14	BSCL2 (ENSNLEG00000004058) #15	LRRN4CL (ENSNLEG00000004054) #16	UBXN1 (ENSNLEG00000004041) #17	UQCC3 (ENSNLEG00000035136) #18	CSKMT (ENSNLEG00000004038) #19	LBHD1 (ENSNLEG00000004026)	INTS5 (ENSNLEG00000035490) #21	GANAB (ENSNLEG00000003980) #22	B3GAT3 (ENSNLEG00000003956) #23	ROM1 (ENSNLEG00000003950) #24	EML3 (ENSNLEG00000003879) #25	MTA2 (ENSNLEG00000003813)	TUT1 (ENSNLEG00000003780) #26	EEF1G (ENSNLEG00000003528) #27	ENSNLEG00000031821 #28	SCGB1A1 (ENSNLEG00000003507) #29	ASRGL1 (ENSNLEG00000003492) #30	ENSNLEG00000030364 #31	ENSNLEG00000003484 ##33	SCGB1D2 (ENSNLEG00000003481) #34	SCGB2A1 (ENSNLEG00000003471) #35	ENSNLEG00000003463	ENSNLEG00000028720
Platyrrhini	ANCESTRAL SPECIES	15	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a.i #30	ENSGT00950000183045.A.a.a.j #30	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.a ##33	ENSGT00530000063866.c.a #34	ENSGT00390000013802.v.b.d #35
Cebidae	ANCESTRAL SPECIES		ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975.i.b #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x.c.b #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a.i #30	ENSGT00950000183045.A.a.a.j #30	ENSGT00530000063866.c.b #32	ENSGT00390000013802.v.a ##33	ENSGT00530000063866.c.a #34	ENSGT00390000013802.v.b.d #35
Cebidae_a	ANCESTRAL SPECIES	18	ENSGT00390000007539.i.a #7	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975.i.a #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f.x.c.b #27	ENSGT00940000154902.bb.b ##28	ENSGT00950000183045.A.a.a.i #30	ENSGT00390000007552.f.x.c.a #27	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00390000013802.v.b.c #33	ENSGT00530000063866.c.a #34	ENSGT00390000013802.v.b.d #35	ENSGT00530000063866.d #36
Bolivian squirrel monkey	MODERN SPECIES	42	NXF1 (ENSSBOG00000019587) #7	TMEM223 (ENSSBOG00000034790)	TMEM179B (ENSSBOG00000030503) #8	TAF6L (ENSSBOG00000030560) #9	POLR2G (ENSSBOG00000015220) #10	ZBTB3 (ENSSBOG00000032000) #11	TTC9C (ENSSBOG00000023530) #12	HNRNPUL2 (ENSSBOG00000026780) #13	GNG3 (ENSSBOG00000015839) #14	BSCL2 (ENSSBOG00000017621) #15	ENSSBOG00000035227 #17	UQCC3 (ENSSBOG00000032621) #18	CSKMT (ENSSBOG00000030424) #19	LBHD1 (ENSSBOG00000022501)	INTS5 (ENSSBOG00000033783) #21	GANAB (ENSSBOG00000031512) #22	B3GAT3 (ENSSBOG00000034134) #23	ROM1 (ENSSBOG00000021679) #24	EML3 (ENSSBOG00000028020) #25	MTA2 (ENSSBOG00000020111)	TUT1 (ENSSBOG00000003827) #26	ENSSBOG00000029342 #27	ENSSBOG00000014296 #28	SCGB1A1 (ENSSBOG00000018756) #29	ASRGL1 (ENSSBOG00000014673) #30	ENSSBOG00000029423	SCGB1D4 (ENSSBOG00000025179) #32	ENSSBOG00000017764	SCGB2A2 (ENSSBOG00000028742) ##33	SCGB1D2 (ENSSBOG00000010503) #34	SCGB2A1 (ENSSBOG00000013372) #35
Capuchin	MODERN SPECIES	316	NXF1 (ENSCCAG00000030567) #7	TMEM223 (ENSCCAG00000009078)	TMEM179B (ENSCCAG00000028319) #8	TAF6L (ENSCCAG00000036664) #9	ENSCCAG00000027746	ZBTB3 (ENSCCAG00000021977) #11	ENSCCAG00000022329	HNRNPUL2 (ENSCCAG00000037674) #13	BSCL2 (ENSCCAG00000026340) #15	GNG3 (ENSCCAG00000030017) #14	UBXN1 (ENSCCAG00000020847) #17	UQCC3 (ENSCCAG00000030092) #18	LBHD1 (ENSCCAG00000025856)	ENSCCAG00000037825 #19	INTS5 (ENSCCAG00000030851) #21	GANAB (ENSCCAG00000001747) #22	ENSCCAG00000037727 #23	ROM1 (ENSCCAG00000023216) #24	EML3 (ENSCCAG00000029421) #25	MTA2 (ENSCCAG00000026631)	TUT1 (ENSCCAG00000018819) #26	ENSCCAG00000033526 #27	AHNAK (ENSCCAG00000025745) ##28	ASRGL1 (ENSCCAG00000024611) #30	ENSCCAG00000022311 #33	SCGB1D2 (ENSCCAG00000033799) #34	SCGB2A1 (ENSCCAG00000030614) #35	SCGB1D1 (ENSCCAG00000032346) #36	INCENP (ENSCCAG00000018638) #37	ENSCCAG00000027979	BEST1 (ENSCCAG00000022350)
Marmoset	MODERN SPECIES	2	TMEM179B (ENSCJAG00000018683) #8	TAF6L (ENSCJAG00000040347) #9	ENSCJAG00000018688 #10	ZBTB3 (ENSCJAG00000018693) #11	TTC9C (ENSCJAG00000018703) #12	HNRNPUL2 (ENSCJAG00000018709) #13	GNG3 (ENSCJAG00000069907) #14	BSCL2 (ENSCJAG00000018730) #15	LRRN4CL (ENSCJAG00000047970) #16	UBXN1 (ENSCJAG00000018751) #17	UQCC3 (ENSCJAG00000082326) #18	CSKMT (ENSCJAG00000018816) #19	LBHD1 (ENSCJAG00000018789)	ENSCJAG00000075366	INTS5 (ENSCJAG00000018821) #21	GANAB (ENSCJAG00000018826) #22	B3GAT3 (ENSCJAG00000018860) #23	ROM1 (ENSCJAG00000044995) #24	EML3 (ENSCJAG00000018884) #25	MTA2 (ENSCJAG00000018928)	TUT1 (ENSCJAG00000033294) #26	ENSCJAG00000018949 #27	ENSCJAG00000072475 #28	SCGB1A1 (ENSCJAG00000019012) #29	ENSCJAG00000078407 #30	ENSCJAG00000055515 #30	SCGB1D4 (ENSCJAG00000019054) #32	SCGB2A2 (ENSCJAG00000019059) ##33	SCGB1D2 (ENSCJAG00000058578) #34	SCGB2A1 (ENSCJAG00000019050) #35	SCGB1D1 (ENSCJAG00000019048) #36
Mas night monkey	MODERN SPECIES	336	NXF1 (ENSANAG00000024600) #7	TMEM223 (ENSANAG00000037673)	TMEM179B (ENSANAG00000036828) #8	TAF6L (ENSANAG00000037691) #9	POLR2G (ENSANAG00000037428) #10	ZBTB3 (ENSANAG00000026704) #11	TTC9C (ENSANAG00000030687) #12	HNRNPUL2 (ENSANAG00000027153) #13	GNG3 (ENSANAG00000028934) #14	ENSANAG00000037042 #15	UBXN1 (ENSANAG00000027543) #17	UQCC3 (ENSANAG00000035176) #18	CSKMT (ENSANAG00000028032) #19	LBHD1 (ENSANAG00000036011)	INTS5 (ENSANAG00000028879) #21	GANAB (ENSANAG00000007532) #22	B3GAT3 (ENSANAG00000035998) #23	ROM1 (ENSANAG00000035173) #24	EML3 (ENSANAG00000024070) #25	MTA2 (ENSANAG00000021803)	TUT1 (ENSANAG00000029063) #26	ENSANAG00000024873 #27	ENSANAG00000034540 ##28	SCGB1A1 (ENSANAG00000027981) #29	ENSANAG00000036672 #30	ENSANAG00000033173 #30	SCGB1D4 (ENSANAG00000035813) #32	ENSANAG00000032810	SCGB2A2 (ENSANAG00000030356) ##33	SCGB1D2 (ENSANAG00000023403) #34	SCGB2A1 (ENSANAG00000023243) #35
Tarsier	MODERN SPECIES	5168															INTS5 (ENSTSYG00000003094) #21	GANAB (ENSTSYG00000003049) #22	B3GAT3 (ENSTSYG00000033176) #23	ROM1 (ENSTSYG00000032516) #24	EML3 (ENSTSYG00000026117) #25	MTA2 (ENSTSYG00000000149)	TUT1 (ENSTSYG00000000147) #26	EEF1G (ENSTSYG00000000144) #27
Strepsirrhini	ANCESTRAL SPECIES	20	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.v.b #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a	ENSGT00940000158650
Lemuriformes	ANCESTRAL SPECIES	14	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.v.b #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a	ENSGT00940000158650
Mouse lemur	MODERN SPECIES	27	NXF1 (ENSMICG00000000980) #7	TMEM223 (ENSMICG00000046109)	TMEM179B (ENSMICG00000000976) #8	TAF6L (ENSMICG00000036223) #9	POLR2G (ENSMICG00000009967) #10	ZBTB3 (ENSMICG00000009961) #11	TTC9C (ENSMICG00000042013) #12	HNRNPUL2 (ENSMICG00000009943) #13	GNG3 (ENSMICG00000028299) #14	ENSMICG00000033250 #15	UBXN1 (ENSMICG00000009925) #17	UQCC3 (ENSMICG00000026609) #18	CSKMT (ENSMICG00000038782) #19	LBHD1 (ENSMICG00000042954)	INTS5 (ENSMICG00000009907) #21	GANAB (ENSMICG00000009890) #22	B3GAT3 (ENSMICG00000009885) #23	ROM1 (ENSMICG00000041920) #24	EML3 (ENSMICG00000009866) #25	MTA2 (ENSMICG00000044141)	TUT1 (ENSMICG00000009841) #26	EEF1G (ENSMICG00000009834) #27	ENSMICG00000031530 ##28	SCGB1A1 (ENSMICG00000041999) #29	ASRGL1 (ENSMICG00000047676) #30	SCGB2A1 (ENSMICG00000003206) #33	ENSMICG00000047195 #32	INCENP (ENSMICG00000005864) #37	ENSMICG00000044535	ENSMICG00000031901	ENSMICG00000035165
Lemuriformes_a	ANCESTRAL SPECIES	3	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.v.b #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a	ENSGT00940000158650
Coquerels sifaka	MODERN SPECIES	124	NXF1 (ENSPCOG00000024446) #7	TMEM223 (ENSPCOG00000028275)	TMEM179B (ENSPCOG00000023933) #8	TAF6L (ENSPCOG00000017276) #9	POLR2G (ENSPCOG00000024131) #10	ZBTB3 (ENSPCOG00000020656) #11	TTC9C (ENSPCOG00000017839) #12	HNRNPUL2 (ENSPCOG00000013502) #13	GNG3 (ENSPCOG00000017973) #14	BSCL2 (ENSPCOG00000015043) #15	UBXN1 (ENSPCOG00000019984) #17	UQCC3 (ENSPCOG00000019522) #18	CSKMT (ENSPCOG00000016342) #19	ENSPCOG00000014134 #20	INTS5 (ENSPCOG00000023497) #21	GANAB (ENSPCOG00000014717) #22	B3GAT3 (ENSPCOG00000008969) #23	ROM1 (ENSPCOG00000027824) #24	EML3 (ENSPCOG00000015725) #25	MTA2 (ENSPCOG00000022200)	TUT1 (ENSPCOG00000017464) #26	EEF1G (ENSPCOG00000015966) #27	ENSPCOG00000028630 ##28	ENSPCOG00000028633 #28	SCGB1A1 (ENSPCOG00000028635) #29	ASRGL1 (ENSPCOG00000028628) #30	SCGB2A1 (ENSPCOG00000028625) #33
Greater bamboo lemur	MODERN SPECIES	101	TMEM223 (ENSPSMG00000023035)	TMEM179B (ENSPSMG00000023026) #8	TAF6L (ENSPSMG00000023017) #9	POLR2G (ENSPSMG00000023003) #10	ZBTB3 (ENSPSMG00000022991) #11	ENSPSMG00000022990	HNRNPUL2 (ENSPSMG00000022973) #13	GNG3 (ENSPSMG00000022948) #14	BSCL2 (ENSPSMG00000022881) #15	LRRN4CL (ENSPSMG00000022803) #16	UBXN1 (ENSPSMG00000022794) #17	UQCC3 (ENSPSMG00000022737) #18	CSKMT (ENSPSMG00000022734) #19	LBHD1 (ENSPSMG00000022723)	INTS5 (ENSPSMG00000022709) #21	GANAB (ENSPSMG00000022613) #22	B3GAT3 (ENSPSMG00000022369) #23	ROM1 (ENSPSMG00000022362) #24	EML3 (ENSPSMG00000022351) #25	MTA2 (ENSPSMG00000022318)	TUT1 (ENSPSMG00000022289) #26	EEF1G (ENSPSMG00000022280) #27	ENSPSMG00000022263 #28	SCGB1A1 (ENSPSMG00000022253) #29	ASRGL1 (ENSPSMG00000022249) #30	ENSPSMG00000022241 #33	ENSPSMG00000022239 #32	INCENP (ENSPSMG00000022199) #37	ENSPSMG00000022147	BEST1 (ENSPSMG00000022118)	RAB3IL1 (ENSPSMG00000022098)
Bushbaby	MODERN SPECIES	255	TMEM179B (ENSOGAG00000008897) #8	TAF6L (ENSOGAG00000008893) #9	POLR2G (ENSOGAG00000032720) #10	ZBTB3 (ENSOGAG00000011414) #11	TTC9C (ENSOGAG00000003305) #12	HNRNPUL2 (ENSOGAG00000003302) #13	GNG3 (ENSOGAG00000034224) #14	BSCL2 (ENSOGAG00000025056) #15	LRRN4CL (ENSOGAG00000031003) #16	UBXN1 (ENSOGAG00000011411) #17	UQCC3 (ENSOGAG00000028729) #18	LBHD1 (ENSOGAG00000025205)	CSKMT (ENSOGAG00000024258) #19	C11orf98 (ENSOGAG00000033103) #20	INTS5 (ENSOGAG00000032704) #21	GANAB (ENSOGAG00000011407) #22	B3GAT3 (ENSOGAG00000011405) #23	ROM1 (ENSOGAG00000032235) #24	EML3 (ENSOGAG00000000836) #25	MTA2 (ENSOGAG00000000833)	TUT1 (ENSOGAG00000000828) #26	EEF1G (ENSOGAG00000000827) #27	ENSOGAG00000031813 ##28	ASRGL1 (ENSOGAG00000000405) #30	SCGB2A1 (ENSOGAG00000013831) #33	ENSOGAG00000030358	INCENP (ENSOGAG00000012974) #37	ENSOGAG00000025354	BEST1 (ENSOGAG00000026226)	RAB3IL1 (ENSOGAG00000004501)	FADS3 (ENSOGAG00000028613)
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.u ##33	ENSGT00530000063866.f.a #32	ENSGT00390000013802.v.a ##33	ENSGT00530000063866.f.b #32	ENSGT00390000013802.v.b #33
Glires	ANCESTRAL SPECIES	1	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.u ##33	ENSGT00530000063866.f.a #32	ENSGT00390000013802.v.b #33	ENSGT00530000063866.f.b #32	ENSGT00730000111073 #37
Rodentia	ANCESTRAL SPECIES	1	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.u ##33	ENSGT00530000063866.f.a #32	ENSGT00390000013802.v.b #33	ENSGT00530000063866.f.b #32	ENSGT00730000111073 #37
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a	ENSGT00940000158650	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b.u.b
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a	ENSGT00940000158650	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b.u.b
Muroidea	ANCESTRAL SPECIES	2	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a	ENSGT00940000158650	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b.u.b
Muroidea_A	ANCESTRAL SPECIES		ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00530000063866.f.a #32	ENSGT00390000013802.u ##33	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a	ENSGT00940000158650
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.u ##33	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a	ENSGT00940000158650	ENSGT00940000159102
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.u ##33	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a.d	ENSGT00940000158650	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b.u.b
Chinese hamster chok1gshd	MODERN SPECIES	401	Tmem223 (ENSCGRG00001023350)	Tmem179b (ENSCGRG00001025014) #8	Taf6l (ENSCGRG00001007467) #9	ENSCGRG00001022692 #10	Zbtb3 (ENSCGRG00001006797) #11	Ttc9c (ENSCGRG00001011015) #12	Hnrnpul2 (ENSCGRG00001017076) #13	Gng3 (ENSCGRG00001014012) #14	Bscl2 (ENSCGRG00001015829) #15	Lrrn4cl (ENSCGRG00001009869) #16	Ubxn1 (ENSCGRG00001006327) #17	Uqcc3 (ENSCGRG00001016702) #18	ENSCGRG00001017126	1810009A15Rik (ENSCGRG00001020427) #20	Ints5 (ENSCGRG00001020963) #21	Ganab (ENSCGRG00001021832) #22	B3GAT3 (ENSCGRG00001023184) #23	Rom1 (ENSCGRG00001013656) #24	Eml3 (ENSCGRG00001015050) #25	Mta2 (ENSCGRG00001005728)	Tut1 (ENSCGRG00001017583) #26	ENSCGRG00001010100	ENSCGRG00001013631 #27	Ahnak (ENSCGRG00001009772) ##28	Scgb1a1 (ENSCGRG00001017835) #29	Asrgl1 (ENSCGRG00001019390) #30	Scgb2a2 (ENSCGRG00001015765) ##33	Incenp (ENSCGRG00001019028) #37	FTH1 (ENSCGRG00001020220)	ENSCGRG00001014139	Rab3il1 (ENSCGRG00001015063)
Golden Hamster	MODERN SPECIES	617	Stx5a (ENSMAUG00000013701)	Nxf1 (ENSMAUG00000014572) #7	Tmem223 (ENSMAUG00000012961)	Tmem179b (ENSMAUG00000012885) #8	Taf6l (ENSMAUG00000015095) #9	Polr2g (ENSMAUG00000013079) #10	Zbtb3 (ENSMAUG00000013055) #11	Ttc9c (ENSMAUG00000013136) #12	Hnrnpul2 (ENSMAUG00000013163) #13	Gng3 (ENSMAUG00000012624) #14	Bscl2 (ENSMAUG00000012700) #15	Lrrn4cl (ENSMAUG00000012372) #16	Ubxn1 (ENSMAUG00000012982) #17	ENSMAUG00000013717	Ints5 (ENSMAUG00000012790) #21	Ganab (ENSMAUG00000013759) #22	Rom1 (ENSMAUG00000012854) #24	Eml3 (ENSMAUG00000014204) #25	Mta2 (ENSMAUG00000012749)	Tut1 (ENSMAUG00000012453) #26	ENSMAUG00000012867 #28	Asrgl1 (ENSMAUG00000012422) #30	Incenp (ENSMAUG00000013427) #37	Fth1 (ENSMAUG00000013659)	ENSMAUG00000013033	Rab3il1 (ENSMAUG00000012007)	Fads3 (ENSMAUG00000012190)	Fads2 (ENSMAUG00000012801)	Fads1 (ENSMAUG00000013100)	ENSMAUG00000012365	Fen1 (ENSMAUG00000012401)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a	ENSGT00940000158650	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b.u.b
Northern American deer mouse	MODERN SPECIES		Nxf1 (ENSPEMG00000006139) #7	Tmem223 (ENSPEMG00000017084)	Tmem179b (ENSPEMG00000011859) #8	Taf6l (ENSPEMG00000011799) #9	Polr2g (ENSPEMG00000000685) #10	Zbtb3 (ENSPEMG00000018613) #11	Ttc9c (ENSPEMG00000026108) #12	Hnrnpul2 (ENSPEMG00000015546) #13	Gng3 (ENSPEMG00000028724) #14	Bscl2 (ENSPEMG00000031381) #15	Lrrn4cl (ENSPEMG00000016106) #16	Ubxn1 (ENSPEMG00000015778) #17	Uqcc3 (ENSPEMG00000030804) #18	1810009A15Rik (ENSPEMG00000031275) #20	Ints5 (ENSPEMG00000004838) #21	Ganab (ENSPEMG00000003185) #22	B3gat3 (ENSPEMG00000009881) #23	Rom1 (ENSPEMG00000003110) #24	Eml3 (ENSPEMG00000008367) #25	Mta2 (ENSPEMG00000007490)	Tut1 (ENSPEMG00000018332) #26	Eef1g (ENSPEMG00000004247) #27	ENSPEMG00000019243 #28	ENSPEMG00000026154 ##28	ENSPEMG00000024701	Scgb1a1 (ENSPEMG00000009557) #29	Asrgl1 (ENSPEMG00000018019) #30	ENSPEMG00000028067	Incenp (ENSPEMG00000008252) #37	ENSPEMG00000020638	Fth1 (ENSPEMG00000017564)
Prairie vole	MODERN SPECIES	16	Tmem223 (ENSMOCG00000010044)	Tmem179b (ENSMOCG00000012843) #8	Taf6l (ENSMOCG00000019616) #9	Polr2g (ENSMOCG00000010638) #10	Zbtb3 (ENSMOCG00000002963) #11	Ttc9c (ENSMOCG00000019481) #12	Hnrnpul2 (ENSMOCG00000020000) #13	Gng3 (ENSMOCG00000020628) #14	ENSMOCG00000009001	Lrrn4cl (ENSMOCG00000009512) #16	Ubxn1 (ENSMOCG00000010707) #17	Uqcc3 (ENSMOCG00000009973) #18	ENSMOCG00000016664	ENSMOCG00000017433 #20	Ints5 (ENSMOCG00000017768) #21	Ganab (ENSMOCG00000021495) #22	B3gat3 (ENSMOCG00000011586) #23	Rom1 (ENSMOCG00000012581) #24	Eml3 (ENSMOCG00000013304) #25	Mta2 (ENSMOCG00000001999)	Tut1 (ENSMOCG00000015834) #26	ENSMOCG00000019677 #27	ENSMOCG00000012405 #28	Scgb1a1 (ENSMOCG00000014419) #29	Asrgl1 (ENSMOCG00000022216) #30	Fam111a (ENSMOCG00000017922)	Gm4952 (ENSMOCG00000015076)	Glyat (ENSMOCG00000016115)	Keg1 (ENSMOCG00000012983)	Cntf (ENSMOCG00000016049)	Zfp91 (ENSMOCG00000018468)
Murinae	ANCESTRAL SPECIES		ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00530000063866.f.a.a.a #32	ENSGT00530000063866.f.a.b #32	ENSGT00390000013802.u ##33	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a
Mus	ANCESTRAL SPECIES		ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.u ##33	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a	ENSGT00940000158650	ENSGT00940000159102
Mus_A	ANCESTRAL SPECIES	16	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.u ##33	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a	ENSGT00940000158650	ENSGT00940000159102
Mus_B	ANCESTRAL SPECIES	16	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.u.a ##33	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a	ENSGT00940000158650	ENSGT00940000159102
Mus_C	ANCESTRAL SPECIES	25	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.u.a ##33	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a	ENSGT00940000158650	ENSGT00940000159102
Steppe mouse	MODERN SPECIES	2399												Uqcc3 (ENSMSIG00000030087) #18	ENSMSIG00000030086	1810009A15Rik (ENSMSIG00000030082) #20	Ints5 (ENSMSIG00000030081) #21	Ganab (ENSMSIG00000030073) #22	B3gat3 (ENSMSIG00000030069) #23	Rom1 (ENSMSIG00000030067) #24	Eml3 (ENSMSIG00000030059) #25	Mta2 (ENSMSIG00000030052)	Tut1 (ENSMSIG00000030047) #26	ENSMSIG00000030044 #27	ENSMSIG00000030038 ##28	ENSMSIG00000030024 #28	Scgb1a1 (ENSMSIG00000030022) #29	Asrgl1 (ENSMSIG00000030021) #30
spretus	MODERN SPECIES	10	Tex54 (MGP_SPRETEiJ_G0023562)	Stx5a (MGP_SPRETEiJ_G0023563)	Taf6l (MGP_SPRETEiJ_G0023565) #9	Polr2g (MGP_SPRETEiJ_G0023566) #10	Zbtb3 (MGP_SPRETEiJ_G0023567) #11	Ttc9c (MGP_SPRETEiJ_G0023568) #12	Hnrnpul2 (MGP_SPRETEiJ_G0023569) #13	Gng3 (MGP_SPRETEiJ_G0023570) #14	Bscl2 (MGP_SPRETEiJ_G0023571) #15	Lrrn4cl (MGP_SPRETEiJ_G0023572) #16	Ubxn1 (MGP_SPRETEiJ_G0023573) #17	Uqcc3 (MGP_SPRETEiJ_G0023574) #18	MGP_SPRETEiJ_G0023575	1810009A15Rik (MGP_SPRETEiJ_G0023576) #20	Ints5 (MGP_SPRETEiJ_G0023577) #21	Ganab (MGP_SPRETEiJ_G0023578) #22	B3gat3 (MGP_SPRETEiJ_G0023579) #23	Rom1 (MGP_SPRETEiJ_G0023580) #24	Eml3 (MGP_SPRETEiJ_G0023581) #25	Mta2 (MGP_SPRETEiJ_G0023582)	Tut1 (MGP_SPRETEiJ_G0023583) #26	Eef1g (MGP_SPRETEiJ_G0023584) #27	Ahnak (MGP_SPRETEiJ_G0023585) ##28	Scgb1a1 (MGP_SPRETEiJ_G0023586) #29	Asrgl1 (MGP_SPRETEiJ_G0023587) #30	Scgb2a2 (MGP_SPRETEiJ_G0023588) ##33	Incenp (MGP_SPRETEiJ_G0023589) #37	Fth1 (MGP_SPRETEiJ_G0023590)	Best1 (MGP_SPRETEiJ_G0023591)	Rab3il1 (MGP_SPRETEiJ_G0023592)	Fads3 (MGP_SPRETEiJ_G0023593)
Mouse	MODERN SPECIES	10	Tmem179b (ENSMUSG00000118346) #8	Taf6l (ENSMUSG00000003680) #9	Polr2g (ENSMUSG00000071662) #10	Zbtb3 (ENSMUSG00000071661) #11	Ttc9c (ENSMUSG00000071660) #12	Hnrnpul2 (ENSMUSG00000071659) #13	Gng3 (ENSMUSG00000071658) #14	Bscl2 (ENSMUSG00000071657) #15	Lrrn4cl (ENSMUSG00000071656) #16	Ubxn1 (ENSMUSG00000071655) #17	Uqcc3 (ENSMUSG00000071654) #18	Lbhd1 (ENSMUSG00000096740)	1810009A15Rik (ENSMUSG00000071653) #20	Gm49416 (ENSMUSG00000116347)	Ints5 (ENSMUSG00000071652) #21	Ganab (ENSMUSG00000071650) #22	B3gat3 (ENSMUSG00000071649) #23	Rom1 (ENSMUSG00000071648) #24	Eml3 (ENSMUSG00000071647) #25	Mta2 (ENSMUSG00000071646)	Tut1 (ENSMUSG00000071645) #26	Eef1g (ENSMUSG00000071644) #27	Ahnak (ENSMUSG00000069833) ##28	Scgb1a1 (ENSMUSG00000024653) #29	Asrgl1 (ENSMUSG00000024654) #30	Scgb2a2 (ENSMUSG00000096872) ##33	Incenp (ENSMUSG00000024660) #37	Fth1 (ENSMUSG00000024661)	Best1 (ENSMUSG00000037418)	Rab3il1 (ENSMUSG00000024663)	Fads3 (ENSMUSG00000024664)
Ryukyu mouse	MODERN SPECIES	10	Stx5a (MGP_CAROLIEiJ_G0022650)	Nxf1 (MGP_CAROLIEiJ_G0022651) #7	Tmem179b (MGP_CAROLIEiJ_G0022652) #8	Polr2g (MGP_CAROLIEiJ_G0022653) #10	Zbtb3 (MGP_CAROLIEiJ_G0022654) #11	Ttc9c (MGP_CAROLIEiJ_G0022655) #12	Hnrnpul2 (MGP_CAROLIEiJ_G0022656) #13	Gng3 (MGP_CAROLIEiJ_G0022657) #14	Bscl2 (MGP_CAROLIEiJ_G0022658) #15	Lrrn4cl (MGP_CAROLIEiJ_G0022659) #16	Ubxn1 (MGP_CAROLIEiJ_G0022660) #17	Uqcc3 (MGP_CAROLIEiJ_G0022661) #18	MGP_CAROLIEiJ_G0022662	MGP_CAROLIEiJ_G0022663 #20	Ints5 (MGP_CAROLIEiJ_G0022664) #21	Ganab (MGP_CAROLIEiJ_G0022665) #22	B3gat3 (MGP_CAROLIEiJ_G0022666) #23	Rom1 (MGP_CAROLIEiJ_G0022667) #24	Eml3 (MGP_CAROLIEiJ_G0022668) #25	Mta2 (MGP_CAROLIEiJ_G0022669)	Tut1 (MGP_CAROLIEiJ_G0022670) #26	Eef1g (MGP_CAROLIEiJ_G0022671) #27	MGP_CAROLIEiJ_G0022672 #28	Scgb1a1 (MGP_CAROLIEiJ_G0022673) #29	Asrgl1 (MGP_CAROLIEiJ_G0022674) #30	Incenp (MGP_CAROLIEiJ_G0022675) #37	Fth1 (MGP_CAROLIEiJ_G0022676)	Best1 (MGP_CAROLIEiJ_G0022677)	Rab3il1 (MGP_CAROLIEiJ_G0022678)	Fads3 (MGP_CAROLIEiJ_G0022679)	Fads2 (MGP_CAROLIEiJ_G0022680)
Shrew mouse	MODERN SPECIES		Wdr74 (MGP_PahariEiJ_G0014143)	Tex54 (MGP_PahariEiJ_G0014144)	MGP_PahariEiJ_G0014145	Nxf1 (MGP_PahariEiJ_G0014146) #7	Taf6l (MGP_PahariEiJ_G0014147) #9	Polr2g (MGP_PahariEiJ_G0014148) #10	Zbtb3 (MGP_PahariEiJ_G0014149) #11	Ttc9c (MGP_PahariEiJ_G0014150) #12	Hnrnpul2 (MGP_PahariEiJ_G0014151) #13	Gng3 (MGP_PahariEiJ_G0014152) #14	Bscl2 (MGP_PahariEiJ_G0014153) #15	Lrrn4cl (MGP_PahariEiJ_G0014154) #16	Ubxn1 (MGP_PahariEiJ_G0014155) #17	Uqcc3 (MGP_PahariEiJ_G0014156) #18	Ints5 (MGP_PahariEiJ_G0014158) #21	Ganab (MGP_PahariEiJ_G0014159) #22	B3gat3 (MGP_PahariEiJ_G0014160) #23	Rom1 (MGP_PahariEiJ_G0014161) #24	Eml3 (MGP_PahariEiJ_G0014162) #25	Mta2 (MGP_PahariEiJ_G0014163)	Tut1 (MGP_PahariEiJ_G0014164) #26	Eef1g (MGP_PahariEiJ_G0014165) #27	MGP_PahariEiJ_G0014166 ##28	Scgb1a1 (MGP_PahariEiJ_G0014167) #29	Asrgl1 (MGP_PahariEiJ_G0014168) #30	Incenp (MGP_PahariEiJ_G0014169) #37	Fth1 (MGP_PahariEiJ_G0014170)	Best1 (MGP_PahariEiJ_G0014171)	Rab3il1 (MGP_PahariEiJ_G0014172)	Fads3 (MGP_PahariEiJ_G0014173)	Fads2 (MGP_PahariEiJ_G0014174)
Rat	MODERN SPECIES		Nxf1 (ENSRNOG00000019069) #7	Tmem223 (ENSRNOG00000019266)	Tmem179b (ENSRNOG00000019341) #8	Taf6l (ENSRNOG00000019419) #9	Zbtb3 (ENSRNOG00000019461) #11	Polr2g (ENSRNOG00000019439) #10	Ttc9c (ENSRNOG00000019464) #12	Hnrnpul2 (ENSRNOG00000019507)	Gng3 (ENSRNOG00000019570) #14	Bscl2 (ENSRNOG00000052393) #15	Ubxn1 (ENSRNOG00000019666) #17	Uqcc3 (ENSRNOG00000045561) #18	Gm49403 (ENSRNOG00000064559)	C1h11orf98 (ENSRNOG00000019701) #20	Ints5 (ENSRNOG00000026005) #21	Ganab (ENSRNOG00000019724) #22	B3gat3 (ENSRNOG00000019873) #25	Rom1 (ENSRNOG00000019858) #24	Mta2 (ENSRNOG00000019913)	Tut1 (ENSRNOG00000020047) #26	Eef1g (ENSRNOG00000020075) #27	Ahnak (ENSRNOG00000057569) ##28	Scgb1a1 (ENSRNOG00000020196) #29	Asrgl1 (ENSRNOG00000020202) #30	Scgb1d2 (ENSRNOG00000020294) #32	Scgb1d4 (ENSRNOG00000020301) #32	Scgb2a1 (ENSRNOG00000020305) ##33	AABR07006242.1 (ENSRNOG00000028909) #32	Scgb2a1 (ENSRNOG00000023151) ##33	ENSRNOG00000062718	Incenp (ENSRNOG00000032929) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	993	Tmem223 (ENSNGAG00000013203)	Tmem179b (ENSNGAG00000019915) #8	Taf6l (ENSNGAG00000020944) #9	Polr2g (ENSNGAG00000020624) #10	Zbtb3 (ENSNGAG00000004122) #11	Ttc9c (ENSNGAG00000010773) #12	Hnrnpul2 (ENSNGAG00000012005) #13	Gng3 (ENSNGAG00000017324) #14	Bscl2 (ENSNGAG00000001576) #15	Lrrn4cl (ENSNGAG00000019480) #16	Ubxn1 (ENSNGAG00000019771) #17	Uqcc3 (ENSNGAG00000012681) #18	ENSNGAG00000013023 #19	1810009A15Rik (ENSNGAG00000016918) #20	Ints5 (ENSNGAG00000020876) #21	Ganab (ENSNGAG00000001471) #22	B3gat3 (ENSNGAG00000011046) #23	Rom1 (ENSNGAG00000011407) #24	Eml3 (ENSNGAG00000020054) #25	Mta2 (ENSNGAG00000001070)	Tut1 (ENSNGAG00000002988) #26	ENSNGAG00000019856 #27	Ahnak (ENSNGAG00000010664) ##28	Scgb1a1 (ENSNGAG00000015223) #29	Asrgl1 (ENSNGAG00000017941) #30
Lesser Egyptian jerboa	MODERN SPECIES	60	Tmem223 (ENSJJAG00000020948)	Tmem179b (ENSJJAG00000010561) #8	Taf6l (ENSJJAG00000017255) #9	ENSJJAG00000009540	Polr2g (ENSJJAG00000005019) #10	Zbtb3 (ENSJJAG00000024243) #11	ENSJJAG00000008957 #12	Hnrnpul2 (ENSJJAG00000011206) #13	Gng3 (ENSJJAG00000015400) #14	ENSJJAG00000019301 #15	Ubxn1 (ENSJJAG00000012631) #17	Uqcc3 (ENSJJAG00000022865) #18	ENSJJAG00000011273	1810009A15Rik (ENSJJAG00000010598) #20	Ints5 (ENSJJAG00000013000) #21	Ganab (ENSJJAG00000024016) #22	B3gat3 (ENSJJAG00000023873) #23	Rom1 (ENSJJAG00000016209) #24	Eml3 (ENSJJAG00000001007) #25	Mta2 (ENSJJAG00000001163)	Tut1 (ENSJJAG00000022329) #26	Eef1g (ENSJJAG00000019511) #27	ENSJJAG00000015059 ##28	Scgb1a1 (ENSJJAG00000013224) #29	Asrgl1 (ENSJJAG00000021275) #30
Kangaroo rat	MODERN SPECIES	436	ENSDORG00000025630	Nxf1 (ENSDORG00000015692) #7	Tmem223 (ENSDORG00000015693)	ENSDORG00000029410 #8	ENSDORG00000015695 #9	ENSDORG00000015696 #10	Zbtb3 (ENSDORG00000015697) #11	Ttc9c (ENSDORG00000028105) #12	Hnrnpul2 (ENSDORG00000008678) #13	Gng3 (ENSDORG00000025670) #14	ENSDORG00000024721	Ubxn1 (ENSDORG00000009406) #17	Uqcc3 (ENSDORG00000025423) #18	1810009A15Rik (ENSDORG00000025730) #20	Ints5 (ENSDORG00000025017) #21	Ganab (ENSDORG00000011363) #22	B3gat3 (ENSDORG00000004024) #23	Rom1 (ENSDORG00000004023) #24	Eml3 (ENSDORG00000004021) #25	Mta2 (ENSDORG00000004019)	Tut1 (ENSDORG00000004018) #26	Eef1g (ENSDORG00000004017) #27	ENSDORG00000026538 ##28	Asrgl1 (ENSDORG00000014041) #30	ENSDORG00000026990	Incenp (ENSDORG00000009799) #37	Fth1 (ENSDORG00000024132)	ENSDORG00000027094	ENSDORG00000001649	Fads3 (ENSDORG00000001648)	Fads2 (ENSDORG00000000340)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.u ##33	ENSGT00530000063866.f.a #32	ENSGT00390000013802.v.b #33	ENSGT00530000063866.f.b #32	ENSGT00730000111073 #37
Sciuridae	ANCESTRAL SPECIES	40	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00530000063866.f.a #32	ENSGT00390000013802.v.b #33	ENSGT00530000063866.f.b #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.a
Marmotini	ANCESTRAL SPECIES	6	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00530000063866.f.a #32	ENSGT00390000013802.v.b.a #33	ENSGT00530000063866.f.b #32	ENSGT00390000013802.v.b.b #33	ENSGT00730000111073 #37
Marmotini_b	ANCESTRAL SPECIES	21	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00530000063866.f.a #32	ENSGT00390000013802.v.b.a #33	ENSGT00530000063866.f.b #32	ENSGT00390000013802.v.b.b #33	ENSGT00730000111073 #37
Squirrel	MODERN SPECIES	181	NXF1 (ENSSTOG00000004463) #7	TMEM179B (ENSSTOG00000004436) #8	TMEM223 (ENSSTOG00000004451)	TAF6L (ENSSTOG00000004406) #9	POLR2G (ENSSTOG00000004391) #10	ZBTB3 (ENSSTOG00000027839) #11	TTC9C (ENSSTOG00000004352) #12	HNRNPUL2 (ENSSTOG00000004327) #13	GNG3 (ENSSTOG00000001052) #14	BSCL2 (ENSSTOG00000024362) #15	LRRN4CL (ENSSTOG00000022001) #16	UBXN1 (ENSSTOG00000004310) #17	UQCC3 (ENSSTOG00000029463) #18	C11orf98 (ENSSTOG00000025290) #20	INTS5 (ENSSTOG00000019630) #21	GANAB (ENSSTOG00000002934) #22	B3GAT3 (ENSSTOG00000002928) #23	ROM1 (ENSSTOG00000023639) #24	EML3 (ENSSTOG00000002908) #25	MTA2 (ENSSTOG00000002883)	TUT1 (ENSSTOG00000002859) #26	ENSSTOG00000002851 #27	ENSSTOG00000030073 #28	SCGB1A1 (ENSSTOG00000010085) #29	ASRGL1 (ENSSTOG00000010064) #30	SCGB2A1 (ENSSTOG00000006184) #33	ENSSTOG00000033144 #32	INCENP (ENSSTOG00000014541) #37	ENSSTOG00000034070	ENSSTOG00000014521	BEST1 (ENSSTOG00000014508)
Arctic ground squirrel	MODERN SPECIES	366	TMEM223 (ENSUPAG00010005332)	TMEM179B (ENSUPAG00010005330) #8	TAF6L (ENSUPAG00010005260) #9	ENSUPAG00010005242 #10	ZBTB3 (ENSUPAG00010005239) #11	TTC9C (ENSUPAG00010005227) #12	HNRNPUL2 (ENSUPAG00010005211) #13	GNG3 (ENSUPAG00010005209) #14	BSCL2 (ENSUPAG00010005172) #15	LRRN4CL (ENSUPAG00010005167) #16	UBXN1 (ENSUPAG00010005156) #17	UQCC3 (ENSUPAG00010005149) #18	CSKMT (ENSUPAG00010005145) #19	C11orf98 (ENSUPAG00010005135) #20	INTS5 (ENSUPAG00010005127) #21	GANAB (ENSUPAG00010005106) #22	B3GAT3 (ENSUPAG00010005100) #23	ROM1 (ENSUPAG00010005099) #24	EML3 (ENSUPAG00010005056) #25	MTA2 (ENSUPAG00010005038)	TUT1 (ENSUPAG00010005020) #26	EEF1G (ENSUPAG00010005012) #27	ENSUPAG00010004999 ##28	ENSUPAG00010004996	ENSUPAG00010004986 #28	ASRGL1 (ENSUPAG00010004983) #30	ENSUPAG00010004973 #32	ENSUPAG00010004955 #33	ENSUPAG00010004946 #32	ENSUPAG00010004941 #33	INCENP (ENSUPAG00010004917) #37
Alpin marmot	MODERN SPECIES	3	NXF1 (ENSMMMG00000003452) #7	TMEM223 (ENSMMMG00000003447)	TMEM179B (ENSMMMG00000003438) #8	TAF6L (ENSMMMG00000003387) #9	POLR2G (ENSMMMG00000003372) #10	ZBTB3 (ENSMMMG00000003369) #11	TTC9C (ENSMMMG00000003362) #12	HNRNPUL2 (ENSMMMG00000002784) #13	GNG3 (ENSMMMG00000002755) #14	BSCL2 (ENSMMMG00000002687) #15	LRRN4CL (ENSMMMG00000002684) #16	UBXN1 (ENSMMMG00000002665) #17	UQCC3 (ENSMMMG00000002655) #18	CSKMT (ENSMMMG00000002643) #19	INTS5 (ENSMMMG00000002623) #21	GANAB (ENSMMMG00000002585) #22	B3GAT3 (ENSMMMG00000002571) #23	ROM1 (ENSMMMG00000002567) #24	EML3 (ENSMMMG00000002484) #25	MTA2 (ENSMMMG00000002461)	TUT1 (ENSMMMG00000002433) #26	ENSMMMG00000002424 #27	ENSMMMG00000002408 ##28	ENSMMMG00000002397 #28	SCGB1A1 (ENSMMMG00000002393) #29	ASRGL1 (ENSMMMG00000002386) #30	ENSMMMG00000002372 #32	ENSMMMG00000002360 #33	ENSMMMG00000002256	BEST1 (ENSMMMG00000002191)	FADS3 (ENSMMMG00000002106)
Eurasian red squirrel	MODERN SPECIES	2	TMEM179B (ENSSVLG00005005020) #8	TAF6L (ENSSVLG00005005050) #9	POLR2G (ENSSVLG00005005070) #10	ZBTB3 (ENSSVLG00005005114) #11	TTC9C (ENSSVLG00005005141) #12	HNRNPUL2 (ENSSVLG00005005186) #13	BSCL2 (ENSSVLG00005005272) #15	GNG3 (ENSSVLG00005005306) #14	LRRN4CL (ENSSVLG00005005319) #16	UBXN1 (ENSSVLG00005005341) #17	UQCC3 (ENSSVLG00005005402) #18	CSKMT (ENSSVLG00005005417) #19	ENSSVLG00005005456 #20	ENSSVLG00005005515	INTS5 (ENSSVLG00005005530) #21	GANAB (ENSSVLG00005005602) #22	B3GAT3 (ENSSVLG00005005875) #23	ROM1 (ENSSVLG00005005903) #24	EML3 (ENSSVLG00005005947) #25	MTA2 (ENSSVLG00005006257)	TUT1 (ENSSVLG00005006406) #26	EEF1G (ENSSVLG00005006436) #27	AHNAK (ENSSVLG00005006485) ##28	SCGB1A1 (ENSSVLG00005006566) #29	ASRGL1 (ENSSVLG00005006616) #30	ENSSVLG00005006645	ENSSVLG00005006675	ENSSVLG00005006740	BEST1 (ENSSVLG00005006784)	RAB3IL1 (ENSSVLG00005006928)	FADS3 (ENSSVLG00005007116)
Hystricomorpha	ANCESTRAL SPECIES	37	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00950000183045.A.a.a #30	ENSGT00530000063866.e #32	ENSGT00940000161089	ENSGT00950000183151.a.a.a	ENSGT00390000015415	ENSGT00950000183197.b.a	ENSGT00390000018587
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	14	STX5 (ENSHGLG00000003553)	NXF1 (ENSHGLG00000002936) #7	TMEM223 (ENSHGLG00000034690)	TAF6L (ENSHGLG00000005590) #9	POLR2G (ENSHGLG00000004851) #10	ZBTB3 (ENSHGLG00000032180) #11	ENSHGLG00000038212	HNRNPUL2 (ENSHGLG00000003285) #13	GNG3 (ENSHGLG00000038630) #14	BSCL2 (ENSHGLG00000002887) #15	ENSHGLG00000038756 #16	UBXN1 (ENSHGLG00000002960) #17	METTL12 (ENSHGLG00000044833) #19	ENSHGLG00000002601 #20	INTS5 (ENSHGLG00000039217) #21	ENSHGLG00000045807 #22	ENSHGLG00000045092 #22	B3GAT3 (ENSHGLG00000004546) #23	ROM1 (ENSHGLG00000003990) #24	MTA2 (ENSHGLG00000002877)	ENSHGLG00000037053 #26	EEF1G (ENSHGLG00000046941) #27	ENSHGLG00000034389 ##28	ENSHGLG00000037481 ##28	ENSHGLG00000035437	ENSHGLG00000038948 #30	ENSHGLG00000029155	ENSHGLG00000046269 #32	ENSHGLG00000033722	ENSHGLG00000002837	ENSHGLG00000046341
Naked mole-rat female	MODERN SPECIES	14	NXF1 (ENSHGLG00000002936) #7	TMEM223 (ENSHGLG00000034690)	TAF6L (ENSHGLG00000005590) #9	POLR2G (ENSHGLG00000004851) #10	ZBTB3 (ENSHGLG00000032180) #11	ENSHGLG00000038212	HNRNPUL2 (ENSHGLG00000003285) #13	GNG3 (ENSHGLG00000038630) #14	BSCL2 (ENSHGLG00000002887) #15	ENSHGLG00000038756 #16	UBXN1 (ENSHGLG00000002960) #17	METTL12 (ENSHGLG00000044833) #19	ENSHGLG00000002601 #20	INTS5 (ENSHGLG00000039217) #21	ENSHGLG00000045807 #22	ENSHGLG00000045092 #22	B3GAT3 (ENSHGLG00000004546) #23	ROM1 (ENSHGLG00000003990) #24	MTA2 (ENSHGLG00000002877)	ENSHGLG00000037053 #26	EEF1G (ENSHGLG00000046941) #27	ENSHGLG00000034389 ##28	ENSHGLG00000037481 ##28	ENSHGLG00000035437	ENSHGLG00000038948 #30	ENSHGLG00000029155	ENSHGLG00000046269 #32	ENSHGLG00000033722	ENSHGLG00000002837	ENSHGLG00000046341	TKFC (ENSHGLG00000018883)
Hystricomorpha_a	ANCESTRAL SPECIES	44	ENSGT00390000007539.i.a #7	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802.u ##33	ENSGT00940000161089	ENSGT00950000183151.a.a.a	ENSGT00390000015415	ENSGT00950000183197.b.a	ENSGT00390000018587	ENSGT00940000153899.a.a
Hystricomorpha_b	ANCESTRAL SPECIES	80	ENSGT00390000007539.i.a #7	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00950000183045.A.a.a #30	ENSGT00940000161089	ENSGT00950000183151.a.a.a	ENSGT00390000015415	ENSGT00950000183197.b.a	ENSGT00390000018587	ENSGT00940000153899.a.a	ENSGT00730000110905.a
Long-tailed chinchilla	MODERN SPECIES	306	TMEM223 (ENSCLAG00000000343)	TMEM179B (ENSCLAG00000000362) #8	TAF6L (ENSCLAG00000000112) #9	POLR2G (ENSCLAG00000000802) #10	ZBTB3 (ENSCLAG00000000861) #11	TTC9C (ENSCLAG00000000902) #12	HNRNPUL2 (ENSCLAG00000000417) #13	LRRN4CL (ENSCLAG00000000228) #16	GNG3 (ENSCLAG00000000268) #14	BSCL2 (ENSCLAG00000000105) #15	UQCC3 (ENSCLAG00000000136) #18	UBXN1 (ENSCLAG00000000144) #17	CSKMT (ENSCLAG00000000298) #19	C11orf98 (ENSCLAG00000000342) #20	INTS5 (ENSCLAG00000000384) #21	GANAB (ENSCLAG00000000345) #22	B3GAT3 (ENSCLAG00000001628) #23	ROM1 (ENSCLAG00000000479) #24	EML3 (ENSCLAG00000001662) #25	MTA2 (ENSCLAG00000000128)	TUT1 (ENSCLAG00000000215) #26	EEF1G (ENSCLAG00000000315) #27	ENSCLAG00000000347 #28
Degu	MODERN SPECIES	320	CHRM1 (ENSODEG00000018978)	SLC3A2 (ENSODEG00000003055)	WDR74 (ENSODEG00000003132)	STX5 (ENSODEG00000003162)	NXF1 (ENSODEG00000001620) #7	TMEM223 (ENSODEG00000001739)	TAF6L (ENSODEG00000001781) #9	ENSODEG00000018748	ENSODEG00000002048 #10	HNRNPUL2 (ENSODEG00000002142) #13	TTC9C (ENSODEG00000002308) #12	GNG3 (ENSODEG00000002315) #14	UBXN1 (ENSODEG00000002987) #17	UQCC3 (ENSODEG00000003020) #18	INTS5 (ENSODEG00000003038) #21	GANAB (ENSODEG00000003210) #22	B3GAT3 (ENSODEG00000003388) #23	ROM1 (ENSODEG00000003428) #24	EML3 (ENSODEG00000003455) #25	MTA2 (ENSODEG00000003595)	TUT1 (ENSODEG00000002204) #26	ENSODEG00000002254 #27	ENSODEG00000002275 #28	ENSODEG00000002297	ENSODEG00000002313 #30	ENSODEG00000002333 #30	VWCE (ENSODEG00000002356)	DDB1 (ENSODEG00000002419)	CYB561A3 (ENSODEG00000002516)	TKFC (ENSODEG00000002529)	TMEM138 (ENSODEG00000002548)
Guinea pig	MODERN SPECIES	44	TMEM223 (ENSCPOG00000006124)	TMEM179B (ENSCPOG00000006121) #8	TAF6L (ENSCPOG00000002702) #9	POLR2G (ENSCPOG00000036420) #10	ZBTB3 (ENSCPOG00000011665) #11	TTC9C (ENSCPOG00000031200) #12	ENSCPOG00000000739	GNG3 (ENSCPOG00000040497) #14	LRRN4CL (ENSCPOG00000036188) #16	BSCL2 (ENSCPOG00000021949) #15	UBXN1 (ENSCPOG00000004750) #17	UQCC3 (ENSCPOG00000035939) #18	CSKMT (ENSCPOG00000027504) #19	C11orf98 (ENSCPOG00000039535) #20	INTS5 (ENSCPOG00000003669) #21	GANAB (ENSCPOG00000003659) #22	B3GAT3 (ENSCPOG00000021841) #23	ROM1 (ENSCPOG00000020227) #24	EML3 (ENSCPOG00000014293) #25	MTA2 (ENSCPOG00000014290)	TUT1 (ENSCPOG00000014281) #26	EEF1G (ENSCPOG00000025703) #27	ENSCPOG00000032311 #28	ASRGL1 (ENSCPOG00000038025) #30	ENSCPOG00000030162 ##33
Lagomorpha	ANCESTRAL SPECIES	147															ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT01060000249020	ENSGT00390000007539.i.a #7	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	450	NXF1 (ENSOCUG00000009503) #7	TMEM223 (ENSOCUG00000009501)	TMEM179B (ENSOCUG00000027739) #8	TAF6L (ENSOCUG00000009491) #9	POLR2G (ENSOCUG00000009485) #10	ZBTB3 (ENSOCUG00000008921) #11	TTC9C (ENSOCUG00000009479) #12	HNRNPUL2 (ENSOCUG00000009474) #13	GNG3 (ENSOCUG00000009468) #14	BSCL2 (ENSOCUG00000026008) #15	UBXN1 (ENSOCUG00000017278) #17	UQCC3 (ENSOCUG00000017252) #18	LBHD1 (ENSOCUG00000017260)	CSKMT (ENSOCUG00000024025) #19	INTS5 (ENSOCUG00000017276) #21	ENSOCUG00000017259 #22	B3GAT3 (ENSOCUG00000017246) #23	ROM1 (ENSOCUG00000022258) #24	EML3 (ENSOCUG00000017228) #25	MTA2 (ENSOCUG00000008849)	TUT1 (ENSOCUG00000017215) #26	ENSOCUG00000033730 #28	ENSOCUG00000025901 ##28	ENSOCUG00000035541 ##28	ASRGL1 (ENSOCUG00000005922) #30	ENSOCUG00000003577 #32	ENSOCUG00000023556 ##33	ENSOCUG00000026803 ##33	ENSOCUG00000030850 #32	ENSOCUG00000023781	ENSOCUG00000022609 #32
Rabbit	MODERN SPECIES	14	ENSOCUG00000030362	ENSOCUG00000031605	ENSOCUG00000000157	NDRG1 (ENSOCUG00000016394)	CCN4 (ENSOCUG00000016390)	SLA (ENSOCUG00000017684)	ENSOCUG00000002999	ENSOCUG00000034085	PHF20L1 (ENSOCUG00000009768)	TMEM71 (ENSOCUG00000009761)	DNAAF11 (ENSOCUG00000009754)	ENSOCUG00000034102	KCNQ3 (ENSOCUG00000012036)	OC90 (ENSOCUG00000012033)	EFR3A (ENSOCUG00000009294)	ENSOCUG00000032952 #22	ENSOCUG00000023866	ENSOCUG00000039078	ENSOCUG00000030310	ADCY8 (ENSOCUG00000002685)	ASAP1 (ENSOCUG00000002414)	ENSOCUG00000013690	ENSOCUG00000021577	ENSOCUG00000024677	ENSOCUG00000038124	ENSOCUG00000025215	ENSOCUG00000000506	MYC (ENSOCUG00000014289)	LRATD2 (ENSOCUG00000003500)	ENSOCUG00000037909	TRIB1 (ENSOCUG00000024295)
Pika	MODERN SPECIES	2658						POLR2G (ENSOPRG00000014769) #10	ENSOPRG00000014743	HNRNPUL2 (ENSOPRG00000014724) #13	GNG3 (ENSOPRG00000014720) #14	BSCL2 (ENSOPRG00000018314) #15	UBXN1 (ENSOPRG00000014688) #17	UQCC3 (ENSOPRG00000014686) #18	CSKMT (ENSOPRG00000018764) #19	LBHD1 (ENSOPRG00000014680)	INTS5 (ENSOPRG00000014673) #21	GANAB (ENSOPRG00000014645) #22	B3GAT3 (ENSOPRG00000014636) #23	ROM1 (ENSOPRG00000014631) #24	EML3 (ENSOPRG00000014597) #25	MTA2 (ENSOPRG00000014575)	EEF1G (ENSOPRG00000014563) #27
Tree shrew	MODERN SPECIES	4683															INTS5 (ENSTBEG00000014202) #21	GANAB (ENSTBEG00000013800) #22	B3GAT3 (ENSTBEG00000013714) #23	ROM1 (ENSTBEG00000013670) #24	EML3 (ENSTBEG00000013431) #25	TUT1 (ENSTBEG00000013123) #26	ENSTBEG00000012860 #27
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650
Eulipotyphla	ANCESTRAL SPECIES	41															ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27
Hedgehog	MODERN SPECIES	4553															INTS5 (ENSEEUG00000009918) #21	GANAB (ENSEEUG00000009818) #22	B3GAT3 (ENSEEUG00000009808) #23	ROM1 (ENSEEUG00000009789) #24	EML3 (ENSEEUG00000009720) #25
Common shrew	MODERN SPECIES	3499																GANAB (ENSSARG00000004978) #22	ENSSARG00000004838 #25	MTA2 (ENSSARG00000004762)
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650
Suina	ANCESTRAL SPECIES	14	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.a.c.b	ENSGT00940000158650
Chacoan peccary	MODERN SPECIES	920	TMEM223 (ENSCWAG00000018420)	TMEM179B (ENSCWAG00000018442) #8	TAF6L (ENSCWAG00000018470) #9	POLR2G (ENSCWAG00000018485) #10	ZBTB3 (ENSCWAG00000018506) #11	TTC9C (ENSCWAG00000018515) #12	HNRNPUL2 (ENSCWAG00000018533) #13	BSCL2 (ENSCWAG00000018615) #15	GNG3 (ENSCWAG00000018653) #14	LRRN4CL (ENSCWAG00000018681) #16	UBXN1 (ENSCWAG00000018701) #17	UQCC3 (ENSCWAG00000018794) #18	CSKMT (ENSCWAG00000018813) #19	C11orf98 (ENSCWAG00000018837) #20	INTS5 (ENSCWAG00000018861) #21	GANAB (ENSCWAG00000018894) #22	B3GAT3 (ENSCWAG00000019113) #23	ROM1 (ENSCWAG00000019159) #24	EML3 (ENSCWAG00000019185) #25	MTA2 (ENSCWAG00000019233)	TUT1 (ENSCWAG00000019273) #26	EEF1G (ENSCWAG00000019299) #27	ENSCWAG00000019329 #28	ENSCWAG00000019398 ##28	SCGB1A1 (ENSCWAG00000019506) #29	ASRGL1 (ENSCWAG00000019530) #30	ENSCWAG00000019557 #33	ENSCWAG00000019575	BEST1 (ENSCWAG00000019634)	RAB3IL1 (ENSCWAG00000019675)	FADS3 (ENSCWAG00000019817)
Pig	MODERN SPECIES	10	NXF1 (ENSSSCG00000022866) #7	TMEM223 (ENSSSCG00000038711)	TMEM179B (ENSSSCG00000032696) #8	TAF6L (ENSSSCG00000020665) #9	POLR2G (ENSSSCG00000025571) #10	ENSSSCG00000037745 #11	TTC9C (ENSSSCG00000035472) #12	HNRNPUL2 (ENSSSCG00000028542) #13	BSCL2 (ENSSSCG00000020823) #15	ENSSSCG00000032197 #14	UBXN1 (ENSSSCG00000023110) #17	UQCC3 (ENSSSCG00000038370) #18	CSKMT (ENSSSCG00000027847) #19	C11orf98 (ENSSSCG00000058339) #20	INTS5 (ENSSSCG00000028275) #21	GANAB (ENSSSCG00000030653) #22	B3GAT3 (ENSSSCG00000020809) #23	ROM1 (ENSSSCG00000033054) #24	EML3 (ENSSSCG00000013061) #25	MTA2 (ENSSSCG00000013062)	TUT1 (ENSSSCG00000013063) #26	ENSSSCG00000013064 #27	ENSSSCG00000036669 #28	ENSSSCG00000033010 ##28	ENSSSCG00000055375 ##28	SCGB1A1 (ENSSSCG00000013060) #29	ASRGL1 (ENSSSCG00000013065) #30	PHEROC (ENSSSCG00000013067) #33	SCGB1D1 (ENSSSCG00000013068) #32	INCENP (ENSSSCG00000013066) #37	ENSSSCG00000014540
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.a.b	ENSGT00940000158650
Cetacea	ANCESTRAL SPECIES	4	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00390000009588.nb	ENSGT00950000182841.b.a.a.b.b.n.b
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805.m #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000167720	ENSGT00950000183045.A.a.a #30	ENSGT00730000111073 #37	ENSGT00390000009588.nb	ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a	ENSGT00940000158650	ENSGT00940000159102
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805.m #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000167720	ENSGT00950000183045.A.a.a #30	ENSGT00730000111073 #37	ENSGT00390000009588.nb	ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a	ENSGT00940000158650	ENSGT00940000159102
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805.m #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000167720	ENSGT00950000183045.A.a.a #30	ENSGT00730000111073 #37	ENSGT00390000009588.nb	ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a.a	ENSGT00940000158650	ENSGT00940000159102
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805.m #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000167720	ENSGT00950000183045.A.a.a #30	ENSGT00730000111073 #37	ENSGT00390000009588.nb	ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a.a	ENSGT00940000158650	ENSGT00940000159102
Beluga whale	MODERN SPECIES	7	TMEM223 (ENSDLEG00000018313)	TMEM179B (ENSDLEG00000018318) #8	TAF6L (ENSDLEG00000018328) #9	POLR2G (ENSDLEG00000018335) #10	ZBTB3 (ENSDLEG00000018348) #11	TTC9C (ENSDLEG00000018352) #12	HNRNPUL2 (ENSDLEG00000018363) #13	GNG3 (ENSDLEG00000018479) #14	BSCL2 (ENSDLEG00000018487) #15	LRRN4CL (ENSDLEG00000018503) #16	UBXN1 (ENSDLEG00000018521) #17	UQCC3 (ENSDLEG00000018687) #18	METTL12 (ENSDLEG00000018693) #19	CUNH11orf98 (ENSDLEG00000018700) #20	INTS5 (ENSDLEG00000018703) #21	GANAB (ENSDLEG00000018708) #22	B3GAT3 (ENSDLEG00000018722) #23	ROM1 (ENSDLEG00000018727) #24	EML3 (ENSDLEG00000018806) #25	MTA2 (ENSDLEG00000019734)	TUT1 (ENSDLEG00000019807) #26	EEF1G (ENSDLEG00000019824) #27	ENSDLEG00000019831 #28	ENSDLEG00000000042 ##28	ENSDLEG00000000054	ASRGL1 (ENSDLEG00000000069) #30	INCENP (ENSDLEG00000000094) #37	ENSDLEG00000000149	FTH1 (ENSDLEG00000000166)	ENSDLEG00000000215	RAB3IL1 (ENSDLEG00000000259)
Narwhal	MODERN SPECIES	314	TMEM223 (ENSMMNG00015019880)	TMEM179B (ENSMMNG00015019852) #8	TAF6L (ENSMMNG00015019824) #9	POLR2G (ENSMMNG00015019791) #10	ZBTB3 (ENSMMNG00015019770) #11	TTC9C (ENSMMNG00015019753) #12	HNRNPUL2 (ENSMMNG00015019703) #13	GNG3 (ENSMMNG00015019682) #14	BSCL2 (ENSMMNG00015019637) #15	ENSMMNG00015019615 #16	UBXN1 (ENSMMNG00015019592) #17	UQCC3 (ENSMMNG00015019569) #18	CSKMT (ENSMMNG00015019549) #19	LBHD1 (ENSMMNG00015019506)	INTS5 (ENSMMNG00015019476) #21	GANAB (ENSMMNG00015019271) #22	B3GAT3 (ENSMMNG00015019182) #23	ROM1 (ENSMMNG00015019160) #24	EML3 (ENSMMNG00015019097) #25	MTA2 (ENSMMNG00015019012)	TUT1 (ENSMMNG00015018972) #26	EEF1G (ENSMMNG00015018940) #27	ENSMMNG00015018882 ##28	ENSMMNG00015018842	ASRGL1 (ENSMMNG00015018816) #30	INCENP (ENSMMNG00015018796) #37	ENSMMNG00015018773	ENSMMNG00015018730	BEST1 (ENSMMNG00015018677)	RAB3IL1 (ENSMMNG00015018609)	FADS3 (ENSMMNG00015018534)
Vaquita	MODERN SPECIES	19	TMEM223 (ENSPSNG00000019439)	TMEM179B (ENSPSNG00000019377) #8	TAF6L (ENSPSNG00000019327) #9	POLR2G (ENSPSNG00000019278) #10	ZBTB3 (ENSPSNG00000019250) #11	TTC9C (ENSPSNG00000019225) #12	HNRNPUL2 (ENSPSNG00000019048) #13	GNG3 (ENSPSNG00000019000) #14	BSCL2 (ENSPSNG00000018928) #15	LRRN4CL (ENSPSNG00000018896) #16	UBXN1 (ENSPSNG00000018815) #17	ENSPSNG00000018693 #18	CSKMT (ENSPSNG00000018651) #19	LBHD1 (ENSPSNG00000018488)	INTS5 (ENSPSNG00000018449) #21	GANAB (ENSPSNG00000018146) #22	B3GAT3 (ENSPSNG00000018034) #23	ROM1 (ENSPSNG00000017989) #24	EML3 (ENSPSNG00000017777) #25	MTA2 (ENSPSNG00000017617)	TUT1 (ENSPSNG00000017538) #26	EEF1G (ENSPSNG00000017454) #27	ENSPSNG00000017355 #28	ENSPSNG00000017310	ASRGL1 (ENSPSNG00000017251) #30	INCENP (ENSPSNG00000017213) #37	ENSPSNG00000017157	ENSPSNG00000017070	RAB3IL1 (ENSPSNG00000016838)	FADS3 (ENSPSNG00000016702)	FADS2 (ENSPSNG00000016437)
Dolphin	MODERN SPECIES	2428	TMEM223 (ENSTTRG00000002481)	TMEM179B (ENSTTRG00000002480) #8	TAF6L (ENSTTRG00000002479) #9	POLR2G (ENSTTRG00000002478) #10	ZBTB3 (ENSTTRG00000002477) #11	ENSTTRG00000002476	HNRNPUL2 (ENSTTRG00000002475) #13	GNG3 (ENSTTRG00000002474) #14	ENSTTRG00000002473 #15	LRRN4CL (ENSTTRG00000002472) #16	UBXN1 (ENSTTRG00000002471) #17	UQCC3 (ENSTTRG00000002470) #18	METTL12 (ENSTTRG00000002469) #19	LBHD1 (ENSTTRG00000002468)	INTS5 (ENSTTRG00000002467) #21	GANAB (ENSTTRG00000002466) #22	B3GAT3 (ENSTTRG00000002465) #23	ROM1 (ENSTTRG00000002464) #24	EML3 (ENSTTRG00000002463) #25	MTA2 (ENSTTRG00000002461)	TUT1 (ENSTTRG00000002460) #26	EEF1G (ENSTTRG00000002459) #27
Sperm whale	MODERN SPECIES	41	TMEM223 (ENSPCTG00005017036)	TMEM179B (ENSPCTG00005016893) #8	TAF6L (ENSPCTG00005016841) #9	POLR2G (ENSPCTG00005016735) #10	ZBTB3 (ENSPCTG00005016716) #11	TTC9C (ENSPCTG00005016675) #12	HNRNPUL2 (ENSPCTG00005016628) #13	GNG3 (ENSPCTG00005016574) #14	BSCL2 (ENSPCTG00005016458) #15	LRRN4CL (ENSPCTG00005016435) #16	UBXN1 (ENSPCTG00005016314) #17	UQCC3 (ENSPCTG00005016275) #18	CSKMT (ENSPCTG00005016237) #19	CUNH11orf98 (ENSPCTG00005016037)	INTS5 (ENSPCTG00005016002) #21	GANAB (ENSPCTG00005015548) #22	B3GAT3 (ENSPCTG00005015447) #23	ROM1 (ENSPCTG00005015418) #24	EML3 (ENSPCTG00005014675) #25	MTA2 (ENSPCTG00005014433)	TUT1 (ENSPCTG00005014312) #26	EEF1G (ENSPCTG00005014278) #27	ENSPCTG00005014260 #28
Blue whale	MODERN SPECIES	19	TMEM223 (ENSBMSG00010008640)	TMEM179B (ENSBMSG00010008625) #8	TAF6L (ENSBMSG00010008522) #9	POLR2G (ENSBMSG00010008473) #10	ZBTB3 (ENSBMSG00010008452) #11	TTC9C (ENSBMSG00010008436) #12	HNRNPUL2 (ENSBMSG00010008413) #13	GNG3 (ENSBMSG00010008393) #14	BSCL2 (ENSBMSG00010008336) #15	LRRN4CL (ENSBMSG00010008324) #16	UBXN1 (ENSBMSG00010008293) #17	UQCC3 (ENSBMSG00010008263) #18	CSKMT (ENSBMSG00010008233) #19	LBHD1 (ENSBMSG00010008202)	INTS5 (ENSBMSG00010008179) #21	GANAB (ENSBMSG00010008146) #22	B3GAT3 (ENSBMSG00010008115) #23	ROM1 (ENSBMSG00010008104) #24	EML3 (ENSBMSG00010008039) #25	MTA2 (ENSBMSG00010007990)	TUT1 (ENSBMSG00010007969) #26	EEF1G (ENSBMSG00010007952) #27	AHNAK (ENSBMSG00010007921) ##28	SCGB1A1 (ENSBMSG00010007899) #29	ASRGL1 (ENSBMSG00010007885) #30	ENSBMSG00010007872 #33	ENSBMSG00010007862 #32	ENSBMSG00010007851	INCENP (ENSBMSG00010007722) #37	ENSBMSG00010007674	ENSBMSG00010007637
Pecora	ANCESTRAL SPECIES	13	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.b	ENSGT00940000158650
Yarkand deer	MODERN SPECIES	11	TMEM223 (ENSCHYG00000018545)	TMEM179B (ENSCHYG00000018397) #8	TAF6L (ENSCHYG00000018298) #9	POLR2G (ENSCHYG00000018228) #10	ZBTB3 (ENSCHYG00000018210) #11	TTC9C (ENSCHYG00000018166) #12	HNRNPUL2 (ENSCHYG00000017808) #13	GNG3 (ENSCHYG00000017765) #14	BSCL2 (ENSCHYG00000017544) #15	LRRN4CL (ENSCHYG00000017512) #16	UBXN1 (ENSCHYG00000017331) #17	UQCC3 (ENSCHYG00000017276) #18	LBHD1 (ENSCHYG00000017004)	CSKMT (ENSCHYG00000016962) #19	INTS5 (ENSCHYG00000016919) #21	GANAB (ENSCHYG00000016139) #22	B3GAT3 (ENSCHYG00000015841) #23	ROM1 (ENSCHYG00000015732) #24	EML3 (ENSCHYG00000015378) #25	MTA2 (ENSCHYG00000015186)	TUT1 (ENSCHYG00000015098) #26	EEF1G (ENSCHYG00000014986) #27	ENSCHYG00000014832 ##28	ENSCHYG00000014697 #28	ENSCHYG00000014657 #29	ASRGL1 (ENSCHYG00000014526) #30	ENSCHYG00000014496 #33	ENSCHYG00000014447 #32	INCENP (ENSCHYG00000014341) #37	ENSCHYG00000014297	ENSCHYG00000014166
Percora_a	ANCESTRAL SPECIES	16	ENSGT01000000214440.C	ENSGT00390000007539.i.a #7	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805.p #12	ENSGT00940000160376 #13	ENSGT00390000011639 #15	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b	ENSGT00940000158650
Bovidae	ANCESTRAL SPECIES	16	ENSGT01000000214440.C	ENSGT00390000007539.i.a #7	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805.p #12	ENSGT00940000160376 #13	ENSGT00390000011639 #15	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a	ENSGT00940000158650
Caprinae	ANCESTRAL SPECIES	20	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805.p #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a	ENSGT00940000158650
Goat	MODERN SPECIES	21	TMEM223 (ENSCHIG00000020466)	TMEM179B (ENSCHIG00000026546) #8	TAF6L (ENSCHIG00000013919) #9	POLR2G (ENSCHIG00000023730) #10	ZBTB3 (ENSCHIG00000008054) #11	TTC9C (ENSCHIG00000014645) #12	HNRNPUL2 (ENSCHIG00000020213) #13	GNG3 (ENSCHIG00000015824) #14	BSCL2 (ENSCHIG00000026480) #15	LRRN4CL (ENSCHIG00000009031) #16	UBXN1 (ENSCHIG00000006820) #17	UQCC3 (ENSCHIG00000018953) #18	CSKMT (ENSCHIG00000011409) #19	C11orf98 (ENSCHIG00000022514) #20	INTS5 (ENSCHIG00000013982) #21	GANAB (ENSCHIG00000022447) #22	ENSCHIG00000016332 #23	ROM1 (ENSCHIG00000010262) #24	EML3 (ENSCHIG00000021585) #25	MTA2 (ENSCHIG00000015501)	TUT1 (ENSCHIG00000006765) #26	ENSCHIG00000022487 #27	AHNAK (ENSCHIG00000015249) ##28	ASRGL1 (ENSCHIG00000024873) #30	ENSCHIG00000018172 #33	ENSCHIG00000013354 #32	INCENP (ENSCHIG00000023449) #37	FTH1 (ENSCHIG00000018949)	BEST1 (ENSCHIG00000005599)	RAB3IL1 (ENSCHIG00000018161)	FADS3 (ENSCHIG00000026956)
Rambouillet Sheep	MODERN SPECIES	13	TMEM179B (ENSOARG00020021391) #8	TAF6L (ENSOARG00020021329) #9	POLR2G (ENSOARG00020021260) #10	ZBTB3 (ENSOARG00020021245) #11	ENSOARG00020021233	TTC9C (ENSOARG00020021198) #12	HNRNPUL2 (ENSOARG00020021145) #13	GNG3 (ENSOARG00020021111) #14	BSCL2 (ENSOARG00020021030) #15	LRRN4CL (ENSOARG00020021003) #16	UBXN1 (ENSOARG00020020882) #17	UQCC3 (ENSOARG00020020837) #18	CSKMT (ENSOARG00020020799) #19	C11orf98 (ENSOARG00020020766) #20	INTS5 (ENSOARG00020020736) #21	GANAB (ENSOARG00020019614) #22	B3GAT3 (ENSOARG00020019536) #23	ROM1 (ENSOARG00020019491) #24	EML3 (ENSOARG00020019331) #25	MTA2 (ENSOARG00020019166)	TUT1 (ENSOARG00020019099) #26	EEF1G (ENSOARG00020019042) #27	ENSOARG00020018899 #28	SCGB1A1 (ENSOARG00020018859) #29	ASRGL1 (ENSOARG00020018816) #30	ENSOARG00020018768 #33	ENSOARG00020018723 #32	INCENP (ENSOARG00020018586) #37	FTH1 (ENSOARG00020018402)	BEST1 (ENSOARG00020018322)	RAB3IL1 (ENSOARG00020017922)
Bovinae	ANCESTRAL SPECIES	24	ENSGT01000000214440.C	ENSGT00390000007539.i.a #7	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805.p #12	ENSGT00940000160376 #13	ENSGT00390000011639 #15	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a	ENSGT00940000158650
Bos	ANCESTRAL SPECIES	11	ENSGT01000000214440.C	ENSGT00390000007539.i.a #7	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805.p.b #12	ENSGT00940000160376 #13	ENSGT00390000011639 #15	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615.m #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a.a	ENSGT00940000158650	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b.u.b
Bos_b	ANCESTRAL SPECIES	10	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805.p.a.a #12	ENSGT00940000161805.p.b #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615.m #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a.a	ENSGT00940000158650	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b.u.b
Cow	MODERN SPECIES	21	TMEM223 (ENSBTAG00000009487)	TMEM179B (ENSBTAG00000009486) #8	TAF6L (ENSBTAG00000009484) #9	POLR2G (ENSBTAG00000009483) #10	ZBTB3 (ENSBTAG00000021329) #11	TTC9C (ENSBTAG00000000773) #12	HNRNPUL2 (ENSBTAG00000002510) #13	GNG3 (ENSBTAG00000002508) #14	BSCL2 (ENSBTAG00000002503) #15	LRRN4CL (ENSBTAG00000010484) #16	UBXN1 (ENSBTAG00000010481) #17	UQCC3 (ENSBTAG00000010470) #18	CSKMT (ENSBTAG00000022293) #19	C29H11orf98 (ENSBTAG00000010465) #20	INTS5 (ENSBTAG00000010455) #21	GANAB (ENSBTAG00000016956) #22	B3GAT3 (ENSBTAG00000016950) #23	ROM1 (ENSBTAG00000001188) #24	EML3 (ENSBTAG00000011872) #25	MTA2 (ENSBTAG00000011865)	TUT1 (ENSBTAG00000011846) #26	EEF1G (ENSBTAG00000011843) #27	AHNAK (ENSBTAG00000013468) ##28	SCGB1A1 (ENSBTAG00000032918) #29	ASRGL1 (ENSBTAG00000006910) #30	SCGB2A2 (ENSBTAG00000015940) #33	SCGB1D (ENSBTAG00000040070) #32	INCENP (ENSBTAG00000050061) #37	FTH1 (ENSBTAG00000011184)	BEST1 (ENSBTAG00000011186)	RAB3IL1 (ENSBTAG00000015745)
Hybrid Bos Indicus	MODERN SPECIES	21	NXF1 (ENSBIXG00005011391) #7	TMEM223 (ENSBIXG00005011347)	TMEM179B (ENSBIXG00005011316) #8	TAF6L (ENSBIXG00005001087) #9	POLR2G (ENSBIXG00005011296) #10	TTC9C (ENSBIXG00005011271) #12	HNRNPUL2 (ENSBIXG00005006206) #13	BSCL2 (ENSBIXG00005011232) #15	GNG3 (ENSBIXG00005011192) #14	LRRN4CL (ENSBIXG00005011174) #16	UBXN1 (ENSBIXG00005011165) #17	UQCC3 (ENSBIXG00005011106) #18	LBHD1 (ENSBIXG00005011086)	CSKMT (ENSBIXG00005010973) #19	INTS5 (ENSBIXG00005000974) #21	GANAB (ENSBIXG00005010906) #22	B3GAT3 (ENSBIXG00005000941) #23	ROM1 (ENSBIXG00005010720) #24	EML3 (ENSBIXG00005010701) #25	MTA2 (ENSBIXG00005000637)	TUT1 (ENSBIXG00005000659) #26	AHNAK (ENSBIXG00005000904) ##28	ENSBIXG00005000712 #29	ASRGL1 (ENSBIXG00005000896) #30	ENSBIXG00005010523 #33	ENSBIXG00005010508 #32	INCENP (ENSBIXG00005010485) #37	ENSBIXG00005000888	BEST1 (ENSBIXG00005010422)	ENSBIXG00005010391	FADS3 (ENSBIXG00005000842)
Bos_a	ANCESTRAL SPECIES	85	ENSGT00390000007539.i.a #7	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805.p.b #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615.m #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26
Wild yak	MODERN SPECIES	1714	NXF1 (ENSBMUG00000023515) #7	TMEM223 (ENSBMUG00000023496)	TMEM179B (ENSBMUG00000023489) #8	TAF6L (ENSBMUG00000023469) #9	POLR2G (ENSBMUG00000023457) #10	ZBTB3 (ENSBMUG00000023437) #11	TTC9C (ENSBMUG00000023431) #12	HNRNPUL2 (ENSBMUG00000023420) #13	GNG3 (ENSBMUG00000023415) #14	BSCL2 (ENSBMUG00000023406) #15	UBXN1 (ENSBMUG00000023388) #17	UQCC3 (ENSBMUG00000023373) #18	CSKMT (ENSBMUG00000023360) #19	ENSBMUG00000023348 #20	INTS5 (ENSBMUG00000023343) #21	GANAB (ENSBMUG00000023315) #22	B3GAT3 (ENSBMUG00000023252) #23	ROM1 (ENSBMUG00000023222) #24	EML3 (ENSBMUG00000023212) #25	ENSBMUG00000023148	ENSBMUG00000023138	TUT1 (ENSBMUG00000023128) #26	EEF1G (ENSBMUG00000023113) #27	ENSBMUG00000023096 ##28	ENSBMUG00000023076 #28
American bison	MODERN SPECIES	3248	TMEM223 (ENSBBBG00000019568)	TMEM179B (ENSBBBG00000019563) #8	TAF6L (ENSBBBG00000005295) #9	POLR2G (ENSBBBG00000008173) #10	ZBTB3 (ENSBBBG00000019531) #11	TTC9C (ENSBBBG00000005281) #12	HNRNPUL2 (ENSBBBG00000019515) #13	GNG3 (ENSBBBG00000019496) #14	BSCL2 (ENSBBBG00000005208) #15	LRRN4CL (ENSBBBG00000019428) #16	UBXN1 (ENSBBBG00000009187) #17	UQCC3 (ENSBBBG00000019369) #18	LBHD1 (ENSBBBG00000019358)	CSKMT (ENSBBBG00000007511) #19	INTS5 (ENSBBBG00000005016) #21	GANAB (ENSBBBG00000019296) #22	B3GAT3 (ENSBBBG00000004913) #23	ROM1 (ENSBBBG00000019099) #24	EML3 (ENSBBBG00000019090) #25	MTA2 (ENSBBBG00000019072)	TUT1 (ENSBBBG00000019032) #26	EEF1G (ENSBBBG00000019015) #27	ENSBBBG00000018998 #28	ENSBBBG00000004835 ##28	ENSBBBG00000018961 #29	ASRGL1 (ENSBBBG00000004812) #30	ENSBBBG00000018946 #33	ENSBBBG00000004805 #32	INCENP (ENSBBBG00000018936) #37	ENSBBBG00000018919	BEST1 (ENSBBBG00000004787)
Siberian musk deer	MODERN SPECIES	1224	TMEM223 (ENSMMSG00000012527)	TMEM179B (ENSMMSG00000012548) #8	TAF6L (ENSMMSG00000012575) #9	ENSMMSG00000012609 #10	ZBTB3 (ENSMMSG00000012634) #11	TTC9C (ENSMMSG00000012643) #12	HNRNPUL2 (ENSMMSG00000012673) #13	BSCL2 (ENSMMSG00000012721) #15	ENSMMSG00000012801 #14	LRRN4CL (ENSMMSG00000012817) #16	UBXN1 (ENSMMSG00000012852) #17	UQCC3 (ENSMMSG00000012897) #18	LBHD1 (ENSMMSG00000012923)	CSKMT (ENSMMSG00000012987) #19	INTS5 (ENSMMSG00000013012) #21	GANAB (ENSMMSG00000013077) #22	B3GAT3 (ENSMMSG00000013309) #23	ENSMMSG00000013341 #24	EML3 (ENSMMSG00000013365) #25	MTA2 (ENSMMSG00000013445)	TUT1 (ENSMMSG00000013495) #26	EEF1G (ENSMMSG00000013530) #27	ENSMMSG00000013555 #28	ENSMMSG00000013596 ##28	SCGB1A1 (ENSMMSG00000013623) #29	ENSMMSG00000013643 #30	ENSMMSG00000013664 #33	ENSMMSG00000013681 #32	INCENP (ENSMMSG00000013713) #37	ENSMMSG00000013740	BEST1 (ENSMMSG00000013766)
Camelidae	ANCESTRAL SPECIES	55	ENSGT00390000012589.e	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650
Arabian camel	MODERN SPECIES	1	TMEM223 (ENSCDRG00005005013)	TMEM179B (ENSCDRG00005005027) #8	TAF6L (ENSCDRG00005005091) #9	POLR2G (ENSCDRG00005005119) #10	ZBTB3 (ENSCDRG00005005155) #11	TTC9C (ENSCDRG00005005167) #12	HNRNPUL2 (ENSCDRG00005005188) #13	GNG3 (ENSCDRG00005005252) #14	BSCL2 (ENSCDRG00005005265) #15	LRRN4CL (ENSCDRG00005005348) #16	UBXN1 (ENSCDRG00005005366) #17	UQCC3 (ENSCDRG00005005440) #18	LBHD1 (ENSCDRG00005005473)	CSKMT (ENSCDRG00005005533) #19	INTS5 (ENSCDRG00005005552) #21	GANAB (ENSCDRG00005005585) #22	B3GAT3 (ENSCDRG00005005790) #23	ROM1 (ENSCDRG00005005805) #24	EML3 (ENSCDRG00005005818) #25	MTA2 (ENSCDRG00005005973)	TUT1 (ENSCDRG00005006030) #26	EEF1G (ENSCDRG00005006080) #27	ENSCDRG00005006109 #28	ENSCDRG00005006152 ##28	SCGB1A1 (ENSCDRG00005006201) #29	ASRGL1 (ENSCDRG00005006211) #30	ENSCDRG00005006247 #33	ENSCDRG00005006269 ##28	ENSCDRG00005006356 #33	ENSCDRG00005006418 #33	ENSCDRG00005006462 #33
Alpaca	MODERN SPECIES	1068															GNG3 (ENSVPAG00000005422) #14	ENSVPAG00000005417 #22	TUT1 (ENSVPAG00000005413) #26
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650
Laurasiatheria_c	ANCESTRAL SPECIES	20	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650	ENSGT00940000159102
Chiroptera	ANCESTRAL SPECIES	14	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00730000111073.k #37	ENSGT00530000063866 #32	ENSGT00730000111073.l #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650
Microchiroptera	ANCESTRAL SPECIES	13	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00730000111073.l #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b.u.b	ENSGT00950000182990.a.a.a.b.u.a
Greater horseshoe bat	MODERN SPECIES	2	TMEM223 (ENSRFEG00010012090)	TMEM179B (ENSRFEG00010012153) #8	TAF6L (ENSRFEG00010012295) #9	POLR2G (ENSRFEG00010012342) #10	ZBTB3 (ENSRFEG00010012397) #11	TTC9C (ENSRFEG00010012416) #12	HNRNPUL2 (ENSRFEG00010012436) #13	GNG3 (ENSRFEG00010012628) #14	BSCL2 (ENSRFEG00010012669) #15	LRRN4CL (ENSRFEG00010012818) #16	UBXN1 (ENSRFEG00010012842) #17	UQCC3 (ENSRFEG00010012979) #18	CSKMT (ENSRFEG00010013001) #19	C11orf98 (ENSRFEG00010013053) #20	INTS5 (ENSRFEG00010013105) #21	GANAB (ENSRFEG00010013176) #22	B3GAT3 (ENSRFEG00010013706) #23	ROM1 (ENSRFEG00010013764) #24	EML3 (ENSRFEG00010013823) #25	MTA2 (ENSRFEG00010013987)	TUT1 (ENSRFEG00010014303) #26	EEF1G (ENSRFEG00010014387) #27	AHNAK (ENSRFEG00010014569) ##28	SCGB1A1 (ENSRFEG00010014646) #29	ASRGL1 (ENSRFEG00010014743) #30	ENSRFEG00010014886 #33	ENSRFEG00010014944 #33	ENSRFEG00010015100 #33	INCENP (ENSRFEG00010015121) #37	ENSRFEG00010015154	RAB3IL1 (ENSRFEG00010015301)
Microbat	MODERN SPECIES	1654	STX5 (ENSMLUG00000011176)	NXF1 (ENSMLUG00000011131) #7	TMEM223 (ENSMLUG00000011118)	TMEM179B (ENSMLUG00000011104) #8	TAF6L (ENSMLUG00000011057) #9	ENSMLUG00000011039 #10	ZBTB3 (ENSMLUG00000011020) #11	TTC9C (ENSMLUG00000010981) #12	HNRNPUL2 (ENSMLUG00000000412) #13	BSCL2 (ENSMLUG00000024511) #15	UQCC3 (ENSMLUG00000024698) #18	UBXN1 (ENSMLUG00000000406) #17	CSKMT (ENSMLUG00000023559) #19	C11orf98 (ENSMLUG00000000396) #20	INTS5 (ENSMLUG00000000391) #21	GANAB (ENSMLUG00000000384) #22	B3GAT3 (ENSMLUG00000000383) #23	EML3 (ENSMLUG00000000365) #25	MTA2 (ENSMLUG00000000357)	TUT1 (ENSMLUG00000000349) #26	EEF1G (ENSMLUG00000000342) #27	AHNAK (ENSMLUG00000006351) ##28
Megabat	MODERN SPECIES	2880	TMEM223 (ENSPVAG00000003491)	TMEM179B (ENSPVAG00000003490) #8	TAF6L (ENSPVAG00000003486) #9	POLR2G (ENSPVAG00000003481) #10	ZBTB3 (ENSPVAG00000003477) #11	ENSPVAG00000003476	HNRNPUL2 (ENSPVAG00000003475) #13	GNG3 (ENSPVAG00000003474) #14	BSCL2 (ENSPVAG00000003473) #15	LRRN4CL (ENSPVAG00000003472) #16	UBXN1 (ENSPVAG00000003470) #17	UQCC3 (ENSPVAG00000003469) #18	CSKMT (ENSPVAG00000003467) #19	LBHD1 (ENSPVAG00000003464)	INTS5 (ENSPVAG00000003463) #21	GANAB (ENSPVAG00000003458) #22	B3GAT3 (ENSPVAG00000003456) #23	ROM1 (ENSPVAG00000003455) #24	EML3 (ENSPVAG00000003451) #25	MTA2 (ENSPVAG00000003447)	TUT1 (ENSPVAG00000003444) #26	EEF1G (ENSPVAG00000003440) #27
Equus	ANCESTRAL SPECIES	11	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486.a #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b.b #29	ENSGT00950000183045.A.a.a.g #30	ENSGT00530000063866.k.a.a #32	ENSGT00390000013802.t.a #33	ENSGT00530000063866.k.a.b #32	ENSGT00530000063866.l #32	ENSGT00390000013802.t.b #33	ENSGT00950000183045.A.a.a.h #30
Horse	MODERN SPECIES	3	TMEM223 (ENSECAG00000001265)	TMEM179B (ENSECAG00000001075) #8	TAF6L (ENSECAG00000021482) #9	POLR2G (ENSECAG00000021465) #10	ZBTB3 (ENSECAG00000021457) #11	ENSECAG00000050506 #12	HNRNPUL2 (ENSECAG00000020298) #13	GNG3 (ENSECAG00000012185) #14	BSCL2 (ENSECAG00000018657) #15	LRRN4CL (ENSECAG00000005381) #16	UBXN1 (ENSECAG00000017404) #17	UQCC3 (ENSECAG00000017332) #18	LBHD1 (ENSECAG00000040586)	CSKMT (ENSECAG00000017322) #19	C11orf98 (ENSECAG00000055466) #20	GANAB (ENSECAG00000014477) #22	B3GAT3 (ENSECAG00000013416) #23	ROM1 (ENSECAG00000013399) #24	MTA2 (ENSECAG00000009847) #25	TUT1 (ENSECAG00000009471) #26	EEF1G (ENSECAG00000014334) #27	AHNAK (ENSECAG00000034383) ##28	ENSECAG00000044462	ASRGL1 (ENSECAG00000013093) #30	ENSECAG00000013056 #32	ENSECAG00000039162	ENSECAG00000012203 #33	ENSECAG00000012519	ENSECAG00000059472 #32	ENSECAG00000028903 #32	ENSECAG00000010565 #33
Donkey	MODERN SPECIES	8	TMEM223 (ENSEASG00005024604)	TMEM179B (ENSEASG00005011364) #8	TAF6L (ENSEASG00005011361) #9	POLR2G (ENSEASG00005011357) #10	ENSEASG00005011353 #11	ENSEASG00005029535 #12	HNRNPUL2 (ENSEASG00005011347) #13	GNG3 (ENSEASG00005026313) #14	BSCL2 (ENSEASG00005011244) #15	LRRN4CL (ENSEASG00005025754) #16	UBXN1 (ENSEASG00005011185) #17	UQCC3 (ENSEASG00005034303) #18	CSKMT (ENSEASG00005034678) #19	LBHD1 (ENSEASG00005030712)	INTS5 (ENSEASG00005011174) #21	GANAB (ENSEASG00005009472) #22	B3GAT3 (ENSEASG00005009313) #23	ROM1 (ENSEASG00005009310) #24	EML3 (ENSEASG00005009301) #25	MTA2 (ENSEASG00005007551)	TUT1 (ENSEASG00005007531) #26	EEF1G (ENSEASG00005007513) #27	ENSEASG00005032006 #29	ENSEASG00005026708 ##28	ENSEASG00005030386 #30	ENSEASG00005034855 #32	ENSEASG00005033208 #33	ENSEASG00005004410 #32	ENSEASG00005025058 #32	ENSEASG00005004407 #33	ENSEASG00005007043 #30
Carnivora	ANCESTRAL SPECIES	7	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B.c.b #14	ENSGT00390000011639 #15	ENSGT01100000263497.B.c.a #14	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650
Felidae	ANCESTRAL SPECIES		ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B.c.b #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650
Panthera	ANCESTRAL SPECIES	18	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B.c.b #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000167720	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650.a.a
Panthera_a	ANCESTRAL SPECIES	18	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B.c.b #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000167720	ENSGT00950000183045.A.a.a #30	ENSGT00390000013802 #33	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650.a.a
lion	MODERN SPECIES	10	TMEM223 (ENSPLOG00000007904)	TMEM179B (ENSPLOG00000007851) #8	TAF6L (ENSPLOG00000007778) #9	POLR2G (ENSPLOG00000007747) #10	ZBTB3 (ENSPLOG00000007729) #11	TTC9C (ENSPLOG00000007708) #12	HNRNPUL2 (ENSPLOG00000007617) #13	ENSPLOG00000007595 #14	BSCL2 (ENSPLOG00000007556) #15	LRRN4CL (ENSPLOG00000009871) #16	UBXN1 (ENSPLOG00000009769) #17	UQCC3 (ENSPLOG00000009743) #18	CSKMT (ENSPLOG00000009731) #19	LBHD1 (ENSPLOG00000009643)	INTS5 (ENSPLOG00000009619) #21	GANAB (ENSPLOG00000009125) #22	B3GAT3 (ENSPLOG00000008977) #23	ROM1 (ENSPLOG00000008948) #24	EML3 (ENSPLOG00000008783) #25	MTA2 (ENSPLOG00000008641)	TUT1 (ENSPLOG00000008550) #26	EEF1G (ENSPLOG00000008495) #27	ENSPLOG00000008461 ##28	ENSPLOG00000008404 #28	ENSPLOG00000008372	ASRGL1 (ENSPLOG00000008346) #30	ENSPLOG00000008312 #33	ENSPLOG00000008289	ENSPLOG00000008201 #32	INCENP (ENSPLOG00000008155) #37	ENSPLOG00000008095
leopard	MODERN SPECIES	64	NXF1 (ENSPPRG00000004342) #7	TMEM223 (ENSPPRG00000004902)	TMEM179B (ENSPPRG00000005200) #8	TAF6L (ENSPPRG00000005589) #9	POLR2G (ENSPPRG00000005669) #10	ZBTB3 (ENSPPRG00000005891) #11	TTC9C (ENSPPRG00000005993) #12	HNRNPUL2 (ENSPPRG00000006380) #13	ENSPPRG00000006909 #14	BSCL2 (ENSPPRG00000008935) #15	LRRN4CL (ENSPPRG00000015844) #16	UBXN1 (ENSPPRG00000010233) #17	UQCC3 (ENSPPRG00000010596) #18	C11orf98 (ENSPPRG00000010833) #20	INTS5 (ENSPPRG00000011031) #21	GANAB (ENSPPRG00000013482) #22	B3GAT3 (ENSPPRG00000013948) #23	ROM1 (ENSPPRG00000014079) #24	EML3 (ENSPPRG00000023815) #25	MTA2 (ENSPPRG00000022897)	TUT1 (ENSPPRG00000000257) #26	EEF1G (ENSPPRG00000000804) #27	ENSPPRG00000001160 ##28	ENSPPRG00000001704	ASRGL1 (ENSPPRG00000002052) #30	ENSPPRG00000002262 #33	INCENP (ENSPPRG00000006209) #37	ENSPPRG00000006764	ENSPPRG00000007445	ENSPPRG00000007627	RAB3IL1 (ENSPPRG00000008696)
Tiger	MODERN SPECIES	369	NXF1 (ENSPTIG00000008897) #7	ENSPTIG00000014441 #8	TAF6L (ENSPTIG00000014940) #9	POLR2G (ENSPTIG00000015781) #10	ZBTB3 (ENSPTIG00000016774) #11	TTC9C (ENSPTIG00000017476) #12	HNRNPUL2 (ENSPTIG00000017670) #13	ENSPTIG00000019130 #14	BSCL2 (ENSPTIG00000019239) #15	LRRN4CL (ENSPTIG00000000217) #16	UBXN1 (ENSPTIG00000008345) #17	UQCC3 (ENSPTIG00000012993) #18	CSKMT (ENSPTIG00000013521) #19	C11orf98 (ENSPTIG00000013699) #20	INTS5 (ENSPTIG00000014269) #21	GANAB (ENSPTIG00000014913) #22	B3GAT3 (ENSPTIG00000017991) #23	ROM1 (ENSPTIG00000019100) #24	EML3 (ENSPTIG00000019503) #25	MTA2 (ENSPTIG00000013509)	TUT1 (ENSPTIG00000017573) #26	EEF1G (ENSPTIG00000018752) #27	ENSPTIG00000019468 #28	ENSPTIG00000002472	ASRGL1 (ENSPTIG00000005323) #30	ENSPTIG00000006814 #33	ENSPTIG00000011535	ENSPTIG00000012608	RAB3IL1 (ENSPTIG00000012918)	FADS3 (ENSPTIG00000014191)	FADS2 (ENSPTIG00000015140)
Cat	MODERN SPECIES	241	TMEM223 (ENSFCAG00000025098)	TMEM179B (ENSFCAG00000014773) #8	TAF6L (ENSFCAG00000022346) #9	POLR2G (ENSFCAG00000026072) #10	ZBTB3 (ENSFCAG00000044175) #11	TTC9C (ENSFCAG00000014768) #12	HNRNPUL2 (ENSFCAG00000014766) #13	ENSFCAG00000035265 #14	BSCL2 (ENSFCAG00000018428) #15	LRRN4CL (ENSFCAG00000044682) #16	UBXN1 (ENSFCAG00000008866) #17	UQCC3 (ENSFCAG00000026508) #18	CSKMT (ENSFCAG00000019062) #19	LBHD1 (ENSFCAG00000038803)	INTS5 (ENSFCAG00000022488) #21	GANAB (ENSFCAG00000008865) #22	B3GAT3 (ENSFCAG00000008864) #23	ROM1 (ENSFCAG00000008863) #24	EML3 (ENSFCAG00000008862) #25	MTA2 (ENSFCAG00000008861)	TUT1 (ENSFCAG00000008859) #26	EEF1G (ENSFCAG00000008858) #27	ENSFCAG00000047570 ##28	ENSFCAG00000045898 ##28	ENSFCAG00000050660 #28	SCGB1A1 (ENSFCAG00000008856) #29	ASRGL1 (ENSFCAG00000008855) #30	ENSFCAG00000024754 #33	ENSFCAG00000034757 #32	INCENP (ENSFCAG00000002264) #37	FTH1 (ENSFCAG00000007382)
Caniformia	ANCESTRAL SPECIES	21	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B.c.b #14	ENSGT00390000011639 #15	ENSGT01100000263497.B.c.a #14	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00530000063866.i #32	ENSGT00390000013802 #33	ENSGT00530000063866.j.b #32	ENSGT00530000063866.j.a #32	ENSGT00730000111073 #37
Canidae	ANCESTRAL SPECIES	13	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B.c.a #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00530000063866.j.b #32	ENSGT00390000013802 #33	ENSGT00530000063866.j.a #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B.c.a #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00530000063866.j.b #32	ENSGT00390000013802.m #33	ENSGT00530000063866.j.a #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650
Dingo	MODERN SPECIES	36	TMEM223 (ENSCAFG00020013148)	TMEM179B (ENSCAFG00020013145) #8	TAF6L (ENSCAFG00020013140) #9	POLR2G (ENSCAFG00020013136) #10	ZBTB3 (ENSCAFG00020013133) #11	TTC9C (ENSCAFG00020013129) #12	HNRNPUL2 (ENSCAFG00020013120) #13	GNG3 (ENSCAFG00020013115) #14	BSCL2 (ENSCAFG00020013107) #15	LRRN4CL (ENSCAFG00020013104) #16	UBXN1 (ENSCAFG00020013102) #17	UQCC3 (ENSCAFG00020013100) #18	CSKMT (ENSCAFG00020013099) #19	C11orf98 (ENSCAFG00020013094) #20	INTS5 (ENSCAFG00020013093) #21	GANAB (ENSCAFG00020013079) #22	B3GAT3 (ENSCAFG00020013076) #23	ROM1 (ENSCAFG00020013070) #24	EML3 (ENSCAFG00020013050) #25	MTA2 (ENSCAFG00020013043)	TUT1 (ENSCAFG00020013039) #26	EEF1G (ENSCAFG00020013031) #27	ENSCAFG00020013019 #28	ENSCAFG00020013011 #29	ASRGL1 (ENSCAFG00020013005) #30	ENSCAFG00020012998 #32	ENSCAFG00020012996 #33	ENSCAFG00020012994 #33	ENSCAFG00020012987 #32	INCENP (ENSCAFG00020012970) #37	ENSCAFG00020012965
Dog	MODERN SPECIES	9	TMEM179B (ENSCAFG00845008033) #8	TMEM223 (ENSCAFG00845008107)	TAF6L (ENSCAFG00845008143) #9	POLR2G (ENSCAFG00845008221) #10	ZBTB3 (ENSCAFG00845008270) #11	TTC9C (ENSCAFG00845008314) #12	HNRNPUL2 (ENSCAFG00845008372) #13	BSCL2 (ENSCAFG00845008494) #15	GNG3 (ENSCAFG00845008569) #14	LRRN4CL (ENSCAFG00845008587) #16	UBXN1 (ENSCAFG00845008628) #17	UQCC3 (ENSCAFG00845008750) #18	C18H11orf98 (ENSCAFG00845008795)	CSKMT (ENSCAFG00845008870) #19	INTS5 (ENSCAFG00845008915) #21	GANAB (ENSCAFG00845008960) #22	B3GAT3 (ENSCAFG00845009269) #23	ROM1 (ENSCAFG00845009299) #24	EML3 (ENSCAFG00845009347) #25	MTA2 (ENSCAFG00845009498)	TUT1 (ENSCAFG00845009613) #26	AHNAK (ENSCAFG00845009750) ##28	SCGB1A1 (ENSCAFG00845009877) #30	ENSCAFG00845010032 #33	ENSCAFG00845010134 #32	INCENP (ENSCAFG00845010188) #37	ENSCAFG00845010380	BEST1 (ENSCAFG00845010439)	RAB3IL1 (ENSCAFG00845010751)	FADS3 (ENSCAFG00845010971)	FADS2 (ENSCAFG00845011145)
Red fox	MODERN SPECIES	49	STX5 (ENSVVUG00000029839)	NXF1 (ENSVVUG00000029840) #7	TMEM223 (ENSVVUG00000029841)	TMEM179B (ENSVVUG00000029842) #8	TAF6L (ENSVVUG00000029843) #9	POLR2G (ENSVVUG00000029844) #10	TTC9C (ENSVVUG00000029845) #12	HNRNPUL2 (ENSVVUG00000029847) #13	GNG3 (ENSVVUG00000029850) #14	BSCL2 (ENSVVUG00000029852) #15	ENSVVUG00000029854 #16	UBXN1 (ENSVVUG00000029856) #17	UQCC3 (ENSVVUG00000029857) #18	CSKMT (ENSVVUG00000029858) #19	INTS5 (ENSVVUG00000029860) #21	GANAB (ENSVVUG00000029861) #22	B3GAT3 (ENSVVUG00000029862) #23	ROM1 (ENSVVUG00000029863) #24	EML3 (ENSVVUG00000029864) #25	MTA2 (ENSVVUG00000029872)	TUT1 (ENSVVUG00000029882) #26	EEF1G (ENSVVUG00000029883) #27	AHNAK (ENSVVUG00000029889) ##28	SCGB1A1 (ENSVVUG00000029891) #29	ASRGL1 (ENSVVUG00000029892) #30	ENSVVUG00000029894 #32	ENSVVUG00000029895 #33
Caniformia_b	ANCESTRAL SPECIES	19	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B.c.b #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00530000063866.i #32	ENSGT00390000013802.k #33	ENSGT00530000063866.j.b #32	ENSGT00390000013802.l #33	ENSGT00530000063866.j.a #32
Mustelinae	ANCESTRAL SPECIES	3	ENSGT00390000007539.i.a #7	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B.c.b #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.a #28	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00530000063866.i #32	ENSGT00390000013802.k #33	ENSGT00530000063866.j.b #32	ENSGT00390000013802.l #33	ENSGT00530000063866.j.a #32
Ferret	MODERN SPECIES	314	WDR74 (ENSMPUG00000013557)	TMEM179B (ENSMPUG00000013609) #8	STX5 (ENSMPUG00000013614)	NXF1 (ENSMPUG00000013658) #7	TMEM223 (ENSMPUG00000013664)	POLR2G (ENSMPUG00000013667) #10	ZBTB3 (ENSMPUG00000013694) #11	TTC9C (ENSMPUG00000013698) #12	HNRNPUL2 (ENSMPUG00000013707) #13	GNG3 (ENSMPUG00000013710) #14	BSCL2 (ENSMPUG00000013712) #15	UBXN1 (ENSMPUG00000013715) #17	LBHD1 (ENSMPUG00000013735)	CSKMT (ENSMPUG00000013738) #19	INTS5 (ENSMPUG00000013741) #21	GANAB (ENSMPUG00000013744) #22	ROM1 (ENSMPUG00000013858) #24	B3GAT3 (ENSMPUG00000013860) #23	EML3 (ENSMPUG00000013879) #25	MTA2 (ENSMPUG00000013883)	TUT1 (ENSMPUG00000013938) #26	EEF1G (ENSMPUG00000013942) #27	ENSMPUG00000013984 ##28	SCGB1A1 (ENSMPUG00000013992) #29	ASRGL1 (ENSMPUG00000013995) #30	ENSMPUG00000013998 #32	ENSMPUG00000014001 #33	ENSMPUG00000014005 #32	ENSMPUG00000014008 #33	ENSMPUG00000014011 #32	INCENP (ENSMPUG00000014015) #37
American mink	MODERN SPECIES	215	NXF1 (ENSNVIG00000020616) #7	TMEM223 (ENSNVIG00000020681)	TMEM179B (ENSNVIG00000020688) #8	TAF6L (ENSNVIG00000020709) #9	RPB7 (ENSNVIG00000020718) #10	ZBTB3 (ENSNVIG00000020739) #11	TTC9C (ENSNVIG00000020741) #12	HNRNPUL2 (ENSNVIG00000020754) #13	BSCL2 (ENSNVIG00000020778) #15	GBG3 (ENSNVIG00000020795) #14	LRRN4CL (ENSNVIG00000020803) #16	UBXN1 (ENSNVIG00000020815) #17	UQCC3 (ENSNVIG00000020874) #18	MTL12 (ENSNVIG00000020886) #19	INTS5 (ENSNVIG00000020902) #21	GANAB (ENSNVIG00000020917) #22	B3GAT3 (ENSNVIG00000020996) #23	ROM1 (ENSNVIG00000021007) #24	EML3 (ENSNVIG00000021014) #25	MTA2 (ENSNVIG00000021082)	TUT1 (ENSNVIG00000021132) #26	EEF1G (ENSNVIG00000021149) #27	ENSNVIG00000021179 #28	ENSNVIG00000021198 ##28	SCGB1A1 (ENSNVIG00000021208) #29	ASRGL1 (ENSNVIG00000021214) #30	ENSNVIG00000021239 #32	ENSNVIG00000021243 #33	ENSNVIG00000021252 #32	ENSNVIG00000021260	ENSNVIG00000021274 #32
Ursidae	ANCESTRAL SPECIES	2	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B.c.b #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457.cb #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00530000063866.i #32	ENSGT00390000013802.k #33	ENSGT00530000063866.j.b #32	ENSGT00390000013802.l #33	ENSGT00730000111073 #37
Giant Panda	MODERN SPECIES	7	TMEM223 (ENSAMEG00000024479)	TMEM179B (ENSAMEG00000006357) #8	TAF6L (ENSAMEG00000006364) #9	POLR2G (ENSAMEG00000006386) #10	ZBTB3 (ENSAMEG00000024771) #11	TTC9C (ENSAMEG00000006425) #12	HNRNPUL2 (ENSAMEG00000006434) #13	ENSAMEG00000002116 #14	GNG3 (ENSAMEG00000006462) #14	BSCL2 (ENSAMEG00000006466) #15	UBXN1 (ENSAMEG00000006490) #17	UQCC3 (ENSAMEG00000020260) #18	CSKMT (ENSAMEG00000006516) #19	LBHD1 (ENSAMEG00000006512)	INTS5 (ENSAMEG00000006517) #21	GANAB (ENSAMEG00000006520) #22	B3GAT3 (ENSAMEG00000006637) #23	ROM1 (ENSAMEG00000006650) #24	EML3 (ENSAMEG00000006659) #25	MTA2 (ENSAMEG00000006678)	TUT1 (ENSAMEG00000006723) #26	ENSAMEG00000006745 #27	ENSAMEG00000025702 ##28	ENSAMEG00000025259 #28	ENSAMEG00000006786 #29	ASRGL1 (ENSAMEG00000006791) #30	ENSAMEG00000025507 #32	ENSAMEG00000030118 #33	INCENP (ENSAMEG00000016838) #37	ENSAMEG00000016831	BEST1 (ENSAMEG00000016808)
Ursus	ANCESTRAL SPECIES	63	ENSGT00390000012589	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B.c.b #14	ENSGT00390000011639 #15	ENSGT00940000162696 #16	ENSGT00940000156457.cb #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552.f #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00530000063866.i #32	ENSGT00390000013802.k #33	ENSGT00530000063866.j.b #32	ENSGT00390000013802.l #33	ENSGT00950000182841.b.a.a.b.b.c.a	ENSGT00730000111073 #37
American black bear	MODERN SPECIES	1548	TMEM223 (ENSUAMG00000025965)	TMEM179B (ENSUAMG00000025966) #8	TAF6L (ENSUAMG00000025967) #9	POLR2G (ENSUAMG00000025968) #10	ZBTB3 (ENSUAMG00000025969) #11	TTC9C (ENSUAMG00000025970) #12	HNRNPUL2 (ENSUAMG00000025971) #13	BSCL2 (ENSUAMG00000025972) #15	GNG3 (ENSUAMG00000025973) #14	LRRN4CL (ENSUAMG00000025974) #16	UBXN1 (ENSUAMG00000025975) #17	UQCC3 (ENSUAMG00000025976) #18	CSKMT (ENSUAMG00000025977) #19	C11orf98 (ENSUAMG00000025979) #20	INTS5 (ENSUAMG00000025981) #21	GANAB (ENSUAMG00000026042) #22	B3GAT3 (ENSUAMG00000027142) #23	ROM1 (ENSUAMG00000027144) #24	EML3 (ENSUAMG00000027153) #25	MTA2 (ENSUAMG00000027236)	TUT1 (ENSUAMG00000027237) #26	EEF1G (ENSUAMG00000027238) #27	ENSUAMG00000027239 ##28	ENSUAMG00000027240	ASRGL1 (ENSUAMG00000027241) #30
Polar bear	DUPLICATION
Polar bear	MODERN SPECIES	303	TMEM179B (ENSUMAG00000014547) #8	ENSUMAG00000014541	POLR2G (ENSUMAG00000014537) #10	ZBTB3 (ENSUMAG00000014533) #11	TTC9C (ENSUMAG00000014527) #12	HNRNPUL2 (ENSUMAG00000014465) #13	GNG3 (ENSUMAG00000014458) #14	BSCL2 (ENSUMAG00000014444) #15	LRRN4CL (ENSUMAG00000014439) #16	UBXN1 (ENSUMAG00000014411) #17	UQCC3 (ENSUMAG00000014404) #18	CSKMT (ENSUMAG00000014401) #19	C11orf98 (ENSUMAG00000014389) #20	INTS5 (ENSUMAG00000014386) #21	ENSUMAG00000014377 #22	ENSUMAG00000014362 #22	B3GAT3 (ENSUMAG00000014361) #23	ROM1 (ENSUMAG00000014360) #24	EML3 (ENSUMAG00000014237) #25	MTA2 (ENSUMAG00000012887)	TUT1 (ENSUMAG00000012710) #26	EEF1G (ENSUMAG00000012578) #27	ENSUMAG00000012558 ##28	ENSUMAG00000012537 ##28	SCGB1A1 (ENSUMAG00000012532) #29	ASRGL1 (ENSUMAG00000012529) #30	ENSUMAG00000012527 #32	ENSUMAG00000012524 #33	ENSUMAG00000012520 #32	ENSUMAG00000012516 #33	ENSUMAG00000012499
Polar bear	MODERN SPECIES	303	NXF1 (ENSUMAG00000014552) #7	TMEM179B (ENSUMAG00000014547) #8	ENSUMAG00000014541	POLR2G (ENSUMAG00000014537) #10	ZBTB3 (ENSUMAG00000014533) #11	TTC9C (ENSUMAG00000014527) #12	HNRNPUL2 (ENSUMAG00000014465) #13	GNG3 (ENSUMAG00000014458) #14	BSCL2 (ENSUMAG00000014444) #15	LRRN4CL (ENSUMAG00000014439) #16	UBXN1 (ENSUMAG00000014411) #17	UQCC3 (ENSUMAG00000014404) #18	CSKMT (ENSUMAG00000014401) #19	C11orf98 (ENSUMAG00000014389) #20	INTS5 (ENSUMAG00000014386) #21	ENSUMAG00000014377 #22	ENSUMAG00000014362 #22	B3GAT3 (ENSUMAG00000014361) #23	ROM1 (ENSUMAG00000014360) #24	EML3 (ENSUMAG00000014237) #25	MTA2 (ENSUMAG00000012887)	TUT1 (ENSUMAG00000012710) #26	EEF1G (ENSUMAG00000012578) #27	ENSUMAG00000012558 ##28	ENSUMAG00000012537 ##28	SCGB1A1 (ENSUMAG00000012532) #29	ASRGL1 (ENSUMAG00000012529) #30	ENSUMAG00000012527 #32	ENSUMAG00000012524 #33	ENSUMAG00000012520 #32	ENSUMAG00000012516 #33
Atlantogenata	ANCESTRAL SPECIES	17	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639.d #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00400000022873	ENSGT00510000049875 #19	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552 #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00530000063866 #32	ENSGT00390000013802 #33	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a	ENSGT00940000158650
Xenarthra	ANCESTRAL SPECIES	58	ENSGT00390000012589.h	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639.d #15	ENSGT00940000162696 #16	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000159921 #24	ENSGT00940000156954 #23	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00940000154902.bb.b ##28	ENSGT00950000183045.A.a.a #30
Armadillo	MODERN SPECIES	576	TMEM179B (ENSDNOG00000045983) #8	ENSDNOG00000031631 #9	POLR2G (ENSDNOG00000043426) #10	ENSDNOG00000012208	ENSDNOG00000043011 #11	TTC9C (ENSDNOG00000006523) #12	HNRNPUL2 (ENSDNOG00000006508) #13	GNG3 (ENSDNOG00000006502) #14	BSCL2 (ENSDNOG00000045976) #15	UBXN1 (ENSDNOG00000002776) #17	UQCC3 (ENSDNOG00000002774) #18	ENSDNOG00000002773	CSKMT (ENSDNOG00000036002) #19	C11orf98 (ENSDNOG00000035199) #20	INTS5 (ENSDNOG00000047221) #21	GANAB (ENSDNOG00000016317) #22	ROM1 (ENSDNOG00000034552) #24	B3GAT3 (ENSDNOG00000046900) #23	EML3 (ENSDNOG00000034127) #25	MTA2 (ENSDNOG00000016309)	TUT1 (ENSDNOG00000038908) #26	AHNAK (ENSDNOG00000045064) ##28	ENSDNOG00000017286 #30
Sloth	MODERN SPECIES	70																GANAB (ENSCHOG00000002880) #22
Afrotheria	ANCESTRAL SPECIES	9	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000165941	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639.d #15	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552 #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a	ENSGT00940000158650	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b.u.b
Afrotheria_a	ANCESTRAL SPECIES	9	ENSGT00510000048151 #8	ENSGT00640000091486.a #9	ENSGT00390000008975 #10	ENSGT00940000161486 #11	ENSGT00940000165941	ENSGT00940000161805 #12	ENSGT00940000160376 #13	ENSGT01100000263497.B #14	ENSGT00390000011639.d #15	ENSGT00940000156457 #17	ENSGT00390000001930 #18	ENSGT00510000049875 #19	ENSGT00400000022873	ENSGT00390000002615 #20	ENSGT00390000008374 #21	ENSGT00940000159139 #22	ENSGT00940000156954 #23	ENSGT00940000159921 #24	ENSGT00940000159589 #25	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #26	ENSGT00390000007552 #27	ENSGT00940000154902.bb.b ##28	ENSGT00940000154902.bb.a #28	ENSGT00940000155073.b #29	ENSGT00950000183045.A.a.a #30	ENSGT00530000063866 #32	ENSGT00730000111073 #37	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a	ENSGT00940000158650	ENSGT00940000159102
Elephant	MODERN SPECIES	532	EML3 (ENSLAFG00000009937) #25	STX5 (ENSLAFG00000006788)	NXF1 (ENSLAFG00000006778) #7	TMEM223 (ENSLAFG00000023089)	TMEM179B (ENSLAFG00000006777) #8	TAF6L (ENSLAFG00000022526) #9	POLR2G (ENSLAFG00000004354) #10	TTC9C (ENSLAFG00000011732) #12	HNRNPUL2 (ENSLAFG00000005377) #13	GNG3 (ENSLAFG00000005381) #14	BSCL2 (ENSLAFG00000030634) #15	UBXN1 (ENSLAFG00000021809) #17	UQCC3 (ENSLAFG00000013152) #18	C11orf98 (ENSLAFG00000013149) #20	INTS5 (ENSLAFG00000005382) #21	GANAB (ENSLAFG00000005386) #22	B3GAT3 (ENSLAFG00000009944) #23	ROM1 (ENSLAFG00000009942) #24	MTA2 (ENSLAFG00000027248)	TUT1 (ENSLAFG00000003340) #26	EEF1G (ENSLAFG00000003339) #27	ENSLAFG00000029676 #28	SCGB1A1 (ENSLAFG00000027694) #29	ASRGL1 (ENSLAFG00000018231) #30	ENSLAFG00000016560 #32	ENSLAFG00000023098 #32	ENSLAFG00000027028 #37	ENSLAFG00000006290 #37	ENSLAFG00000004824	BEST1 (ENSLAFG00000004818)	RAB3IL1 (ENSLAFG00000004815)
Hyrax	MODERN SPECIES	3681											UBXN1 (ENSPCAG00000015811) #17	UQCC3 (ENSPCAG00000015788) #18	CSKMT (ENSPCAG00000015776) #19	LBHD1 (ENSPCAG00000015704)	INTS5 (ENSPCAG00000015692) #21	GANAB (ENSPCAG00000015527) #22	B3GAT3 (ENSPCAG00000015505) #23	ROM1 (ENSPCAG00000015467) #24	EML3 (ENSPCAG00000015362) #25	MTA2 (ENSPCAG00000015261)
Tenrec	MODERN SPECIES	87																ENSETEG00000011394 #22