Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000157005 #22
Gnathostomata	ANCESTRAL SPECIES	1011																ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24
Euteleostomi	ANCESTRAL SPECIES	66	ENSGT00940000160075	ENSGT00390000002757	ENSGT00940000165431	ENSGT00390000015520	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT01080000257342.H	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a	ENSGT00940000156305
Sarcopterygii	ANCESTRAL SPECIES	26	ENSGT00940000165431	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a	ENSGT00940000156305
Tetrapoda	ANCESTRAL SPECIES	12	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Amniota	ANCESTRAL SPECIES	13	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Mammalia	ANCESTRAL SPECIES	7	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Theria	ANCESTRAL SPECIES	5	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Eutheria	ANCESTRAL SPECIES	5	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00940000182224	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00910000147422	ENSGT00950000183039.B.a	ENSGT00940000156335
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00940000182224	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00910000147422	ENSGT00950000183039.B.a	ENSGT00940000156335
Glires	ANCESTRAL SPECIES	2	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00940000182224	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00910000147422	ENSGT00950000183039.B.a	ENSGT00940000156335
Rodentia	ANCESTRAL SPECIES	2	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00940000182224	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00910000147422	ENSGT00950000183039.B.a	ENSGT00940000156335
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00910000147422	ENSGT00950000183039.B.a	ENSGT00940000156335
Hystricomorpha	ANCESTRAL SPECIES	6	ENSGT00940000161601	ENSGT00940000160075	ENSGT00390000002757.u	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Naked mole-rat female	MODERN SPECIES	27	PHC3 (ENSHGLG00000014756) #7	PRKCI (ENSHGLG00000011160) #8	SKIL (ENSHGLG00000011598) #9	ENSHGLG00000032237 #10	CLDN11 (ENSHGLG00000043741) #11	ENSHGLG00000037289 #12	ENSHGLG00000049917 #13	SLC7A14 (ENSHGLG00000012232) #14	ENSHGLG00000046725 #15	RPL22L1 (ENSHGLG00000045881) #16	ENSHGLG00000012647 #17	SLC2A2 (ENSHGLG00000049404) #18	TNIK (ENSHGLG00000013310) #19	PLD1 (ENSHGLG00000014314) #20	TMEM212 (ENSHGLG00000014698) #21	FNDC3B (ENSHGLG00000014877) #22	GHSR (ENSHGLG00000014950) #23	TNFSF10 (ENSHGLG00000044629) #24	NCEH1 (ENSHGLG00000010683) #25	ECT2 (ENSHGLG00000011074) #26	ENSHGLG00000011562 #27	ENSHGLG00000003841 #28	SPATA16 (ENSHGLG00000011913) #29	ENSHGLG00000048748 #30	NLGN1 (ENSHGLG00000013440) #31	ENSHGLG00000042892 #32	NAALADL2 (ENSHGLG00000013839) #33	ENSHGLG00000050637 #34	ENSHGLG00000033259 #35	TBL1XR1 (ENSHGLG00000044077) #36	ENSHGLG00000050422 #37
Hystricomorpha_a	ANCESTRAL SPECIES	4	ENSGT00940000161601	ENSGT00940000160075	ENSGT00390000002757.u	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Guinea pig	MODERN SPECIES	100	LRRIQ4 (ENSCPOG00000011649)	SAMD7 (ENSCPOG00000025571)	SEC62 (ENSCPOG00000040337)	GPR160 (ENSCPOG00000007388)	PHC3 (ENSCPOG00000005870) #7	PRKCI (ENSCPOG00000015212) #8	SKIL (ENSCPOG00000006684) #9	CLDN11 (ENSCPOG00000033278) #11	SLC7A14 (ENSCPOG00000011615) #14	ENSCPOG00000009215 #16	EIF5A2 (ENSCPOG00000012594) #17	SLC2A2 (ENSCPOG00000012055) #18	TNIK (ENSCPOG00000012060) #19	PLD1 (ENSCPOG00000010721) #20	TMEM212 (ENSCPOG00000000573) #21	FNDC3B (ENSCPOG00000011705) #22	GHSR (ENSCPOG00000014041) #23	TNFSF10 (ENSCPOG00000031635) #24
Hystricomorpha_b	ANCESTRAL SPECIES	9	ENSGT00940000161601	ENSGT00940000160075	ENSGT00390000002757.u	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b.n.a #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Degu	MODERN SPECIES	96	PHC3 (ENSODEG00000007882) #7	PRKCI (ENSODEG00000007927) #8	ENSODEG00000019467	SKIL (ENSODEG00000007781) #9	CLDN11 (ENSODEG00000008979) #11	SLC7A14 (ENSODEG00000008674) #14	ENSODEG00000009861	ENSODEG00000008003 #16	ENSODEG00000007731 #17	ENSODEG00000019567	SLC2A2 (ENSODEG00000008360) #18	TNIK (ENSODEG00000007936) #19	PLD1 (ENSODEG00000006929) #20	ENSODEG00000019876	TMEM212 (ENSODEG00000010772) #21	ENSODEG00000007581 #22	GHSR (ENSODEG00000007538) #23	TNFSF10 (ENSODEG00000007502) #24	NCEH1 (ENSODEG00000006949) #25	ENSODEG00000007260 #26	ENSODEG00000019421	SPATA16 (ENSODEG00000007354) #29	NLGN1 (ENSODEG00000006900) #31	ENSODEG00000006853	ENSODEG00000008026
Long-tailed chinchilla	MODERN SPECIES	127	LRRIQ4 (ENSCLAG00000014708)	SAMD7 (ENSCLAG00000011650)	ENSCLAG00000010122	GPR160 (ENSCLAG00000011119)	PHC3 (ENSCLAG00000012350) #7	PRKCI (ENSCLAG00000014828) #8	SKIL (ENSCLAG00000011070) #9	CLDN11 (ENSCLAG00000009889) #11	SLC7A14 (ENSCLAG00000010996) #14	RPL22L1 (ENSCLAG00000012186) #16	ENSCLAG00000013461 #17	SLC2A2 (ENSCLAG00000014131) #18	TNIK (ENSCLAG00000011229) #19	PLD1 (ENSCLAG00000012419) #20	TMEM212 (ENSCLAG00000016037) #21	FNDC3B (ENSCLAG00000015717) #22	GHSR (ENSCLAG00000012973) #23	TNFSF10 (ENSCLAG00000015552) #24	ENSCLAG00000017893	NCEH1 (ENSCLAG00000011865) #25	ENSCLAG00000013454 ##28	ECT2 (ENSCLAG00000015030) #26	SPATA16 (ENSCLAG00000016484) #29	NLGN1 (ENSCLAG00000010604) #31	NAALADL2 (ENSCLAG00000012428) #33	ENSCLAG00000018045	TBL1XR1 (ENSCLAG00000013893) #36	KCNMB2 (ENSCLAG00000014319)	ZMAT3 (ENSCLAG00000013464)	PIK3CA (ENSCLAG00000015135)	KCNMB3 (ENSCLAG00000014741)
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01020000233244	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00910000147422	ENSGT00950000183039.B.a
Marmotini	ANCESTRAL SPECIES	59	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b.q.a #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01020000233244	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00910000147422	ENSGT00950000183039.B.a
Marmotini_b	ANCESTRAL SPECIES	133	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b.q.a #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01020000233244	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299.s #26
Arctic ground squirrel	MODERN SPECIES	147	SAMD7 (ENSUPAG00010021006)	SEC62 (ENSUPAG00010020997)	GPR160 (ENSUPAG00010020984)	PHC3 (ENSUPAG00010020799) #7	PRKCI (ENSUPAG00010020789) #8	ENSUPAG00010020782	SKIL (ENSUPAG00010020765) #9	CLDN11 (ENSUPAG00010020762) #11	SLC7A14 (ENSUPAG00010020744) #14	ENSUPAG00010020724 #16	ENSUPAG00010020720 #17	SLC2A2 (ENSUPAG00010020713) #18	TNIK (ENSUPAG00010019607) #19	PLD1 (ENSUPAG00010019510) #20	TMEM212 (ENSUPAG00010019493) #21	FNDC3B (ENSUPAG00010019380) #22	GHSR (ENSUPAG00010019371) #23	ENSUPAG00010019366	TNFSF10 (ENSUPAG00010019355) #24	NCEH1 (ENSUPAG00010019346) #25	ECT2 (ENSUPAG00010019299) #26
Squirrel	MODERN SPECIES	193	SAMD7 (ENSSTOG00000003350)	SEC62 (ENSSTOG00000009366)	ENSSTOG00000002772	PHC3 (ENSSTOG00000002796) #7	PRKCI (ENSSTOG00000002794) #8	SKIL (ENSSTOG00000008045) #9	CLDN11 (ENSSTOG00000008070) #11	ENSSTOG00000030657	SLC7A14 (ENSSTOG00000008097) #14	RPL22L1 (ENSSTOG00000022972) #16	ENSSTOG00000008130 #17	SLC2A2 (ENSSTOG00000010407) #18	TNIK (ENSSTOG00000002770) #19	PLD1 (ENSSTOG00000010180) #20	TMEM212 (ENSSTOG00000010214) #21	FNDC3B (ENSSTOG00000015567) #22	GHSR (ENSSTOG00000015577) #23	TNFSF10 (ENSSTOG00000006286) #24	NCEH1 (ENSSTOG00000006303) #25	ENSSTOG00000023909 #26
Alpin marmot	MODERN SPECIES	37	PHC3 (ENSMMMG00000006935) #7	PRKCI (ENSMMMG00000006916) #8	ENSMMMG00000006906	ENSMMMG00000006901	ENSMMMG00000006897	SKIL (ENSMMMG00000006825) #9	CLDN11 (ENSMMMG00000006819) #11	SLC7A14 (ENSMMMG00000006796) #14	ENSMMMG00000006781 #16	EIF5A2 (ENSMMMG00000006767) #17	ENSMMMG00000006749 #28	SLC2A2 (ENSMMMG00000006743) #18	TNIK (ENSMMMG00000005292) #19	PLD1 (ENSMMMG00000005075) #20	TMEM212 (ENSMMMG00000005043) #21	FNDC3B (ENSMMMG00000004936) #22	ENSMMMG00000004926	GHSR (ENSMMMG00000004921) #23	TNFSF10 (ENSMMMG00000004911) #24	NCEH1 (ENSMMMG00000004887) #25	ENSMMMG00000004880	ECT2 (ENSMMMG00000004729) #26	SPATA16 (ENSMMMG00000004708) #29	NLGN1 (ENSMMMG00000004664) #31	ENSMMMG00000004633	ENSMMMG00000004628	NAALADL2 (ENSMMMG00000004611) #33	ENSMMMG00000004587	ENSMMMG00000004514 #36	KCNMB2 (ENSMMMG00000004486)	ZMAT3 (ENSMMMG00000004454)
Eurasian red squirrel	MODERN SPECIES	1	ENSSVLG00005013185	GPR160 (ENSSVLG00005013127)	PHC3 (ENSSVLG00005012992) #7	ENSSVLG00005012724 #8	ENSSVLG00005012666	SKIL (ENSSVLG00005012473) #9	CLDN11 (ENSSVLG00005012422) #11	SLC7A14 (ENSSVLG00005012335) #14	ENSSVLG00005012248 #16	EIF5A2 (ENSSVLG00005012156) #17	SLC2A2 (ENSSVLG00005012009) #18	ENSSVLG00005009676 #19	ENSSVLG00005009308	PLD1 (ENSSVLG00005009258) #20	TMEM212 (ENSSVLG00005009205) #21	FNDC3B (ENSSVLG00005009155) #22	GHSR (ENSSVLG00005009108) #23	ENSSVLG00005009074	TNFSF10 (ENSSVLG00005009030) #24	ENSSVLG00005009000	NCEH1 (ENSSVLG00005008940) #25	ECT2 (ENSSVLG00005008532) #26	SPATA16 (ENSSVLG00005008419) #29	NLGN1 (ENSSVLG00005008366) #31	ENSSVLG00005008340	NAALADL2 (ENSSVLG00005008257) #33	TBL1XR1 (ENSSVLG00005008184) #36	ENSSVLG00005008160	KCNMB2 (ENSSVLG00005008096)	ENSSVLG00005008059	ZMAT3 (ENSSVLG00005008037)
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00940000182224	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Myomorpha	ANCESTRAL SPECIES	38	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00940000182224	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Muroidea	ANCESTRAL SPECIES	44	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00940000182224	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509.xc.a #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00940000182224	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT01050000244888.b.a.c.b.h	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458	ENSGT00900000143480
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00940000161601	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509.xc.a #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT01050000244888.b.a.c.b.h	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458	ENSGT00900000143480
Cricetidae_B	ANCESTRAL SPECIES	55	ENSGT00940000161601	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509.xc.a #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT01050000244888.b.a.c.b.h	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458	ENSGT00940000155866
Northern American deer mouse	MODERN SPECIES	19	Sec62 (ENSPEMG00000025604)	ENSPEMG00000029962	Gpr160 (ENSPEMG00000019162)	Phc3 (ENSPEMG00000010761) #7	Prkci (ENSPEMG00000014995) #8	Skil (ENSPEMG00000014296) #9	Cldn11 (ENSPEMG00000030576) #11	Slc7a14 (ENSPEMG00000007696) #14	ENSPEMG00000029517	Rpl22l1 (ENSPEMG00000012683) #16	Eif5a2 (ENSPEMG00000027640) #17	Slc2a2 (ENSPEMG00000014197) #18	Tnik (ENSPEMG00000008623) #19	Pld1 (ENSPEMG00000015027) #20	Tmem212 (ENSPEMG00000005772) #21	Fndc3b (ENSPEMG00000027449) #22	Ghsr (ENSPEMG00000012672) #23	Tnfsf10 (ENSPEMG00000014291) #24	Nceh1 (ENSPEMG00000025404) #25	Ect2 (ENSPEMG00000006276) #26	Spata16 (ENSPEMG00000010570) #29	Nlgn1 (ENSPEMG00000000168) #31	Naaladl2 (ENSPEMG00000011857) #33	ENSPEMG00000030654	ENSPEMG00000029610	ENSPEMG00000012741	Pabpc4l (ENSPEMG00000012565)	Pcdh10 (ENSPEMG00000021689)	ENSPEMG00000023007	Sclt1 (ENSPEMG00000012760)	Jade1 (ENSPEMG00000010395)
Prairie vole	MODERN SPECIES		Pgrmc2 (ENSMOCG00000017117)	ENSMOCG00000013228	ENSMOCG00000001490	ENSMOCG00000017515	Mfsd8 (ENSMOCG00000012827)	Plk4 (ENSMOCG00000010477)	Hspa4l (ENSMOCG00000022385)	Slc25a31 (ENSMOCG00000017699)	Intu (ENSMOCG00000013260)	Fat4 (ENSMOCG00000018552)	Ankrd50 (ENSMOCG00000004523)	Slc2a2 (ENSMOCG00000016334) #18	Tnik (ENSMOCG00000002021) #19	Pld1 (ENSMOCG00000019861) #20	Tmem212 (ENSMOCG00000014617) #21	Fndc3b (ENSMOCG00000018057) #22	Ghsr (ENSMOCG00000010453) #23	Tnfsf10 (ENSMOCG00000001683) #24	Nceh1 (ENSMOCG00000021848) #25	Ect2 (ENSMOCG00000016900) #26	Spata16 (ENSMOCG00000014167) #29	Nlgn1 (ENSMOCG00000006420) #31	Tbl1xr1 (ENSMOCG00000022629) #36	ENSMOCG00000006252	ENSMOCG00000007296	Cpb1 (ENSMOCG00000020527)	Cpa3 (ENSMOCG00000020637)	Gyg (ENSMOCG00000013677)	Hltf (ENSMOCG00000019747)	Hps3 (ENSMOCG00000010766)	Cp (ENSMOCG00000016138)
Cricetinae	ANCESTRAL SPECIES	13	ENSGT00940000161601	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509.xc.a #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT01050000244888.b.a.c.b.h	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458	ENSGT00900000143480
Chinese hamster chok1gshd	MODERN SPECIES	352	Samd7 (ENSCGRG00001019079)	Sec62 (ENSCGRG00001001768)	ENSCGRG00001009824	Gpr160 (ENSCGRG00001011099)	Phc3 (ENSCGRG00001007694) #7	Prkci (ENSCGRG00001001514) #8	Skil (ENSCGRG00001011528) #9	Cldn11 (ENSCGRG00001022207) #11	Slc7a14 (ENSCGRG00001013994) #14	Rpl22l1 (ENSCGRG00001019790) #16	Eif5a2 (ENSCGRG00001021268) #17	Slc2a2 (ENSCGRG00001016694) #18	Tnik (ENSCGRG00001021152) #19	Pld1 (ENSCGRG00001023076) #20	Tmem212 (ENSCGRG00001018197) #21	Fndc3b (ENSCGRG00001016574) #22	Ghsr (ENSCGRG00001022780) #23	Tnfsf10 (ENSCGRG00001006321) #24	Nceh1 (ENSCGRG00001007699) #25	Ect2 (ENSCGRG00001011775) #26	Spata16 (ENSCGRG00001013349) #29	Nlgn1 (ENSCGRG00001012016) #31	Naaladl2 (ENSCGRG00001014389) #33	Tbl1xr1 (ENSCGRG00001012826) #36	ENSCGRG00001002531	ENSCGRG00001005511	ENSCGRG00001009352	Agtr1b (ENSCGRG00001010827)	Cpb1 (ENSCGRG00001021645)	Cpa3 (ENSCGRG00001015838)	Gyg (ENSCGRG00001022471)
Golden Hamster	MODERN SPECIES	636	Lrrc34 (ENSMAUG00000011698)	Lrriq4 (ENSMAUG00000017468)	Sec62 (ENSMAUG00000011713)	Gpr160 (ENSMAUG00000009648)	Phc3 (ENSMAUG00000006325) #7	Prkci (ENSMAUG00000020818) #8	Skil (ENSMAUG00000017443) #9	Cldn11 (ENSMAUG00000019455) #11	Slc7a14 (ENSMAUG00000000165) #14	Rpl22l1 (ENSMAUG00000018874) #16	Eif5a2 (ENSMAUG00000020017) #17	Slc2a2 (ENSMAUG00000005062) #18	ENSMAUG00000020914	Pld1 (ENSMAUG00000021115) #20	Tmem212 (ENSMAUG00000008004) #21	Fndc3b (ENSMAUG00000001787) #22	Ghsr (ENSMAUG00000012511) #23	Tnfsf10 (ENSMAUG00000014296) #24	Nceh1 (ENSMAUG00000000627) #25	Ect2 (ENSMAUG00000009386) #26	Spata16 (ENSMAUG00000000205) #29	ENSMAUG00000000750	Nlgn1 (ENSMAUG00000008660) #31
Murinae	ANCESTRAL SPECIES	5	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509.xc.a #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000182224	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT01050000244888.b.a.c.b.h	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458	ENSGT00940000155866
Mus	ANCESTRAL SPECIES	7	ENSGT00730000111293	ENSGT00940000161601	ENSGT00940000156456	ENSGT00940000161266	ENSGT00940000162209	ENSGT00390000012265	ENSGT00940000157208	ENSGT00940000164694	ENSGT00940000154509.xc.a #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000182224	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT01050000244888.b.a.c.b.h	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458	ENSGT00940000155866
Mus_A	ANCESTRAL SPECIES	9	ENSGT00730000111293	ENSGT00940000161601	ENSGT00940000156456	ENSGT00940000161266	ENSGT00940000162209	ENSGT00390000012265	ENSGT00940000157208	ENSGT00940000164694	ENSGT00940000154509.xc.a #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000182224	ENSGT00950000183196.B #19	ENSGT00940000155015.b #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT01050000244888.b.a.c.b.h	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458	ENSGT00940000155866
Mus_B	ANCESTRAL SPECIES	8	ENSGT00730000111293	ENSGT00940000161601	ENSGT00940000156456	ENSGT00940000161266	ENSGT00940000162209	ENSGT00390000012265	ENSGT00940000157208	ENSGT00940000164694	ENSGT00940000154509.xc.a #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000182224	ENSGT00950000183196.B #19	ENSGT00940000155015.b #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT01050000244888.b.a.c.b.h	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458	ENSGT00940000155866
Mus_C	ANCESTRAL SPECIES	6	ENSGT00730000111293	ENSGT00940000161601	ENSGT00940000156456	ENSGT00940000161266	ENSGT00940000162209	ENSGT00390000012265	ENSGT00940000157208	ENSGT00940000164694	ENSGT00940000154509.xc.a #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000182224	ENSGT00950000183196.B #19	ENSGT00940000155015.b #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT01050000244888.b.a.c.b.h	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458	ENSGT00940000155866
Steppe mouse	MODERN SPECIES	3119									ENSMSIG00000022887 #16	Eif5a2 (ENSMSIG00000022876) #17	Slc2a2 (ENSMSIG00000022854) #18	ENSMSIG00000022848	Tnik (ENSMSIG00000022583) #19	Pld1 (ENSMSIG00000022498) #20	Tmem212 (ENSMSIG00000022484) #21	Fndc3b (ENSMSIG00000022129) #22	Ghsr (ENSMSIG00000022097) #23	Tnfsf10 (ENSMSIG00000022048) #24	Nceh1 (ENSMSIG00000022034) #25	Ect2 (ENSMSIG00000021918) #26	ENSMSIG00000021907	Spata16 (ENSMSIG00000021824) #29
spretus	MODERN SPECIES	12	Samd7 (MGP_SPRETEiJ_G0025839)	MGP_SPRETEiJ_G0025838	Lrriq4 (MGP_SPRETEiJ_G0025837)	Lrrc34 (MGP_SPRETEiJ_G0025836)	Mynn (MGP_SPRETEiJ_G0025835)	Actrt3 (MGP_SPRETEiJ_G0025834)	Mecom (MGP_SPRETEiJ_G0025833)	Egfem1 (MGP_SPRETEiJ_G0025832)	Rpl22l1 (MGP_SPRETEiJ_G0025831) #16	Eif5a2 (MGP_SPRETEiJ_G0025830) #17	Slc2a2 (MGP_SPRETEiJ_G0025828) #18	Tnik (MGP_SPRETEiJ_G0025827) #19	MGP_SPRETEiJ_G0025826 #20	Pld1 (MGP_SPRETEiJ_G0025825) #20	Tmem212 (MGP_SPRETEiJ_G0025824) #21	Fndc3b (MGP_SPRETEiJ_G0025823) #22	Ghsr (MGP_SPRETEiJ_G0025822) #23	Tnfsf10 (MGP_SPRETEiJ_G0025821) #24	Nceh1 (MGP_SPRETEiJ_G0025820) #25	Ect2 (MGP_SPRETEiJ_G0025819) #26	Spata16 (MGP_SPRETEiJ_G0025818) #29	Nlgn1 (MGP_SPRETEiJ_G0025817) #31	MGP_SPRETEiJ_G0025816 #33	MGP_SPRETEiJ_G0025815 #33	Tbl1xr1 (MGP_SPRETEiJ_G0025814) #36	Agtr1b (MGP_SPRETEiJ_G0025813)	Cpa3 (MGP_SPRETEiJ_G0025812)	Cpb1 (MGP_SPRETEiJ_G0025811)	Gyg (MGP_SPRETEiJ_G0025810)	Hltf (MGP_SPRETEiJ_G0025809)	Hps3 (MGP_SPRETEiJ_G0025808)
Mouse	MODERN SPECIES	12	Samd7 (ENSMUSG00000051860)	Lrrc31 (ENSMUSG00000074653)	Lrriq4 (ENSMUSG00000027703)	Lrrc34 (ENSMUSG00000027702)	Mynn (ENSMUSG00000037730)	Actrt3 (ENSMUSG00000037737)	Mecom (ENSMUSG00000027684)	Egfem1 (ENSMUSG00000063600)	Gm1527 (ENSMUSG00000074655)	Rpl22l1 (ENSMUSG00000039221) #16	Eif5a2 (ENSMUSG00000050192) #17	Slc2a2 (ENSMUSG00000027690) #18	Tnik (ENSMUSG00000027692) #19	Pld1 (ENSMUSG00000027695) #20	Tmem212 (ENSMUSG00000043164) #21	Fndc3b (ENSMUSG00000039286) #22	Ghsr (ENSMUSG00000051136) #23	Tnfsf10 (ENSMUSG00000039304) #24	Nceh1 (ENSMUSG00000027698) #25	Ect2 (ENSMUSG00000027699) #26	Spata16 (ENSMUSG00000039335) #29	Nlgn1 (ENSMUSG00000063887) #31	Naaladl2 (ENSMUSG00000102758) #33	Tbl1xr1 (ENSMUSG00000027630) #36	Agtr1b (ENSMUSG00000054988)	Cpb1 (ENSMUSG00000011463)	Cpa3 (ENSMUSG00000001865)	Gyg (ENSMUSG00000019528)	Hltf (ENSMUSG00000002428)	Hps3 (ENSMUSG00000027615)	Cp (ENSMUSG00000003617)
Ryukyu mouse	MODERN SPECIES	12	Sec62 (MGP_CAROLIEiJ_G0024906)	MGP_CAROLIEiJ_G0024905	Lrrc31 (MGP_CAROLIEiJ_G0024904)	Lrriq4 (MGP_CAROLIEiJ_G0024903)	Lrrc34 (MGP_CAROLIEiJ_G0024902)	Mynn (MGP_CAROLIEiJ_G0024901)	Actrt3 (MGP_CAROLIEiJ_G0024900)	Mecom (MGP_CAROLIEiJ_G0024899)	Egfem1 (MGP_CAROLIEiJ_G0024898)	Rpl22l1 (MGP_CAROLIEiJ_G0024897) #16	Eif5a2 (MGP_CAROLIEiJ_G0024896) #17	Slc2a2 (MGP_CAROLIEiJ_G0024895) #18	Tnik (MGP_CAROLIEiJ_G0024894) #19	Pld1 (MGP_CAROLIEiJ_G0024893) #20	Tmem212 (MGP_CAROLIEiJ_G0024892) #21	Fndc3b (MGP_CAROLIEiJ_G0024891) #22	Ghsr (MGP_CAROLIEiJ_G0024890) #23	Tnfsf10 (MGP_CAROLIEiJ_G0024889) #24	Nceh1 (MGP_CAROLIEiJ_G0024888) #25	MGP_CAROLIEiJ_G0024887 #26	Spata16 (MGP_CAROLIEiJ_G0024886) #29	Nlgn1 (MGP_CAROLIEiJ_G0024885) #31	Naaladl2 (MGP_CAROLIEiJ_G0024884) #33	Tbl1xr1 (MGP_CAROLIEiJ_G0024883) #36	Agtr1b (MGP_CAROLIEiJ_G0024882)	Cpb1 (MGP_CAROLIEiJ_G0024881)	Cpa3 (MGP_CAROLIEiJ_G0024880)	Gyg (MGP_CAROLIEiJ_G0024879)	Hltf (MGP_CAROLIEiJ_G0024878)	Hps3 (MGP_CAROLIEiJ_G0024877)	Cp (MGP_CAROLIEiJ_G0024876)
Shrew mouse	MODERN SPECIES	17	Sec62 (MGP_PahariEiJ_G0026351)	Samd7 (MGP_PahariEiJ_G0026350)	MGP_PahariEiJ_G0026349	Lrriq4 (MGP_PahariEiJ_G0026348)	Lrrc34 (MGP_PahariEiJ_G0026347)	Mynn (MGP_PahariEiJ_G0026346)	Actrt3 (MGP_PahariEiJ_G0026345)	Mecom (MGP_PahariEiJ_G0026344)	Egfem1 (MGP_PahariEiJ_G0026343)	Rpl22l1 (MGP_PahariEiJ_G0026342) #16	Eif5a2 (MGP_PahariEiJ_G0026341) #17	MGP_PahariEiJ_G0026340 #18	Tnik (MGP_PahariEiJ_G0026339) #19	Pld1 (MGP_PahariEiJ_G0026338) #20	Tmem212 (MGP_PahariEiJ_G0026337) #21	Fndc3b (MGP_PahariEiJ_G0026336) #22	Ghsr (MGP_PahariEiJ_G0026335) #23	Tnfsf10 (MGP_PahariEiJ_G0026334) #24	Nceh1 (MGP_PahariEiJ_G0026333) #25	Ect2 (MGP_PahariEiJ_G0026332) #26	Spata16 (MGP_PahariEiJ_G0026331) #29	Nlgn1 (MGP_PahariEiJ_G0026330) #31	Naaladl2 (MGP_PahariEiJ_G0026329) #33	Tbl1xr1 (MGP_PahariEiJ_G0026328) #36	Agtr1b (MGP_PahariEiJ_G0026327)	Cpb1 (MGP_PahariEiJ_G0026326)	Cpa3 (MGP_PahariEiJ_G0026325)	Gyg (MGP_PahariEiJ_G0026324)	Hltf (MGP_PahariEiJ_G0026323)	Hps3 (MGP_PahariEiJ_G0026322)	Cp (MGP_PahariEiJ_G0026321)
Rat	MODERN SPECIES	11	Lrrc31 (ENSRNOG00000027971)	Samd7 (ENSRNOG00000027995)	Sec62 (ENSRNOG00000009057)	Gpr160 (ENSRNOG00000009487)	Phc3 (ENSRNOG00000009491) #7	Prkci (ENSRNOG00000009652) #8	Skil (ENSRNOG00000009899) #9	Cldn11 (ENSRNOG00000010263) #11	Slc7a14 (ENSRNOG00000028097) #14	Rpl22l1 (ENSRNOG00000011817) #16	Eif5a2 (ENSRNOG00000011859) #17	Slc2a2 (ENSRNOG00000011875) #18	Tnik (ENSRNOG00000012422) #19	Pld1 (ENSRNOG00000028156) #20	Tmem212 (ENSRNOG00000012608) #21	Fndc3b (ENSRNOG00000024089) #22	Ghsr (ENSRNOG00000024119) #23	Tnfsf10 (ENSRNOG00000067968) #24	Nceh1 (ENSRNOG00000013313) #25	Ect2 (ENSRNOG00000024365) #26	Spata16 (ENSRNOG00000024521) #29	Nlgn1 (ENSRNOG00000032576) #31	ENSRNOG00000033028	Naaladl2 (ENSRNOG00000065021) #33	Tbl1xr1 (ENSRNOG00000011216) #36	LOC120100784 (ENSRNOG00000031378)	ENSRNOG00000070560	Agtr1b (ENSRNOG00000010640)	Cpb1 (ENSRNOG00000030904)	Cpa3 (ENSRNOG00000011181)	Gyg1 (ENSRNOG00000011146)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1102															Tmem212 (ENSNGAG00000013793) #21	ENSNGAG00000014346 #22	Ghsr (ENSNGAG00000016912) #23	Tnfsf10 (ENSNGAG00000019256) #24	Nceh1 (ENSNGAG00000003637) #25
Lesser Egyptian jerboa	MODERN SPECIES	47	ENSJJAG00000003413	Phc3 (ENSJJAG00000011053) #7	ENSJJAG00000023027	ENSJJAG00000001391	Prkci (ENSJJAG00000023257) #8	Skil (ENSJJAG00000023237) #9	Cldn11 (ENSJJAG00000023284) #11	Slc7a14 (ENSJJAG00000000839) #14	ENSJJAG00000003376	Rpl22l1 (ENSJJAG00000016622) #16	ENSJJAG00000014550 #17	Slc2a2 (ENSJJAG00000022990) #18	Tnik (ENSJJAG00000015526) #19	Pld1 (ENSJJAG00000017079) #20	Tmem212 (ENSJJAG00000019737) #21	ENSJJAG00000023375 #22	Ghsr (ENSJJAG00000022390) #23	Nceh1 (ENSJJAG00000023562) #25	Ect2 (ENSJJAG00000001186) #26	Spata16 (ENSJJAG00000021398) #29	Nlgn1 (ENSJJAG00000018596) #31	Naaladl2 (ENSJJAG00000001804) #33	ENSJJAG00000012112 #36	Kcnmb2 (ENSJJAG00000021914)	Zmat3 (ENSJJAG00000004288)	Pik3ca (ENSJJAG00000021453)	Kcnmb3 (ENSJJAG00000023050)	ENSJJAG00000024013	Mfn1 (ENSJJAG00000019731)	ENSJJAG00000023681	Actl6a (ENSJJAG00000017810)
Kangaroo rat	MODERN SPECIES	349	Lrrc34 (ENSDORG00000006055)	Lrriq4 (ENSDORG00000006057)	Samd7 (ENSDORG00000005194)	ENSDORG00000023703	Gpr160 (ENSDORG00000028195)	Phc3 (ENSDORG00000008567) #7	Prkci (ENSDORG00000014568) #8	Skil (ENSDORG00000005119) #9	Cldn11 (ENSDORG00000015448) #11	Slc7a14 (ENSDORG00000015452) #14	Rpl22l1 (ENSDORG00000005926) #16	Eif5a2 (ENSDORG00000014800) #17	Slc2a2 (ENSDORG00000004280) #18	Tnik (ENSDORG00000004287) #19	Pld1 (ENSDORG00000011673) #20	ENSDORG00000027147 #22	Ghsr (ENSDORG00000013291) #23	Tnfsf10 (ENSDORG00000025688) #24	Nceh1 (ENSDORG00000029369) #25	Ect2 (ENSDORG00000004898) #26	Spata16 (ENSDORG00000006630) #29	Nlgn1 (ENSDORG00000004771) #31	Naaladl2 (ENSDORG00000004371) #33	Tbl1xr1 (ENSDORG00000016259) #36	Kcnmb2 (ENSDORG00000007718)
Lagomorpha	ANCESTRAL SPECIES	6	ENSGT00940000156456	ENSGT00940000161601	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a	ENSGT00940000156305	ENSGT00390000002837	ENSGT00390000009980	ENSGT00940000157401
Rabbit	MODERN SPECIES	5	SAMD7 (ENSOCUG00000008711)	SEC62 (ENSOCUG00000008720)	ENSOCUG00000032753	GPR160 (ENSOCUG00000013094)	PHC3 (ENSOCUG00000013120) #7	PRKCI (ENSOCUG00000014563) #8	ENSOCUG00000034586	SKIL (ENSOCUG00000013509) #9	CLDN11 (ENSOCUG00000005520) #11	SLC7A14 (ENSOCUG00000005585) #14	ENSOCUG00000016657 #17	SLC2A2 (ENSOCUG00000004587) #18	TNIK (ENSOCUG00000004598) #19	PLD1 (ENSOCUG00000014089) #20	TMEM212 (ENSOCUG00000014446) #21	FNDC3B (ENSOCUG00000004185) #22	GHSR (ENSOCUG00000007340) #23	TNLG6A (ENSOCUG00000014848) #24	NCEH1 (ENSOCUG00000005345) #25	ECT2 (ENSOCUG00000009484) #26	ENSOCUG00000030050	ENSOCUG00000035488	SPATA16 (ENSOCUG00000004746) #29	ENSOCUG00000037918	ENSOCUG00000032329	NLGN1 (ENSOCUG00000009269) #31	ENSOCUG00000032927	NAALADL2 (ENSOCUG00000002042) #33	ENSOCUG00000006064	ENSOCUG00000020904	ENSOCUG00000031291
Pika	MODERN SPECIES	3711																ENSOPRG00000003203 #22	ENSOPRG00000003254 #23
Tree shrew	MODERN SPECIES	4278																FNDC3B (ENSTBEG00000010428) #22	GHSR (ENSTBEG00000011302) #23
Primates	ANCESTRAL SPECIES	1	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000182224	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00910000147422	ENSGT00950000183039.B.a	ENSGT00940000156335
Haplorrhini	ANCESTRAL SPECIES	5	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00910000147422	ENSGT00950000183039.B.a	ENSGT00940000156335
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000001813	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00910000147422	ENSGT00950000183039.B.a	ENSGT00940000156335
Catarrhini	ANCESTRAL SPECIES	2	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b.g.a #17	ENSGT00940000155235.g.a	ENSGT00390000003738.a.b.h #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000001813	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000155147.n	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00940000159720.x	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00910000147422
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00390000002944.e.a.b	ENSGT00940000154509 #16	ENSGT00390000003738.a.b.g.a #17	ENSGT00940000155235.g.a	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00390000009310.j.a.b	ENSGT00940000155015 #20	ENSGT00390000001813	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000155147.n	ENSGT00550000076377	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00940000159720.x	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00390000002944.e.a.b	ENSGT00940000154509 #16	ENSGT00390000003738.a.b.g.a #17	ENSGT00940000155235.g.a	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00390000009310.j.a.b	ENSGT00940000155015 #20	ENSGT00390000001813	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000155147.n	ENSGT00550000076377	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00940000159720.x	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00390000002944.e.a.b	ENSGT00940000154509 #16	ENSGT00390000003738.a.b.g.a #17	ENSGT00940000155235.g.a	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00390000009310.j.a.b	ENSGT00940000155015 #20	ENSGT00390000001813	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000155147.n	ENSGT00550000076377	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00940000159720.x	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT00940000154259.l.c.a.a.b	ENSGT01030000234598.a.b #33	ENSGT00860000135711.a	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202
Macaca	ANCESTRAL SPECIES	5	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00390000002944.e.a.b	ENSGT00940000154509 #16	ENSGT00390000003738.a.b.g.a #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00390000009310.j.a.b	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000155147.n	ENSGT00550000076377	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00940000159720.x	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT00940000154259.l.c.a.a.b	ENSGT01030000234598.a.b #33	ENSGT00860000135711.a	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202
Pig-tailed macaque	MODERN SPECIES	89	SEC62 (ENSMNEG00000045483)	GPR160 (ENSMNEG00000026358)	PHC3 (ENSMNEG00000041687) #7	PRKCI (ENSMNEG00000042988) #8	SKIL (ENSMNEG00000029052) #9	SLC7A14 (ENSMNEG00000044204) #14	CLDN11 (ENSMNEG00000035029) #11	ENSMNEG00000041749	ENSMNEG00000028803 #16	EIF5A2 (ENSMNEG00000045137) #17	SLC2A2 (ENSMNEG00000041973) #18	TNIK (ENSMNEG00000044193) #19	ENSMNEG00000039660	PLD1 (ENSMNEG00000015096) #20	TMEM212 (ENSMNEG00000004183) #21	FNDC3B (ENSMNEG00000039869) #22	GHSR (ENSMNEG00000031555) #23	TNFSF10 (ENSMNEG00000039143) #24	ENSMNEG00000038270	ENSMNEG00000044761	ENSMNEG00000032611	NCEH1 (ENSMNEG00000029066) #25	ECT2 (ENSMNEG00000037054) #26	SPATA16 (ENSMNEG00000038551) #29
Macaca_a	ANCESTRAL SPECIES	5	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b.g.a #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT01100000263539.b.b.b.b.b.a.a.a.b.b	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT01100000263539.b.a.a.a.b.b.b.b.a.a.a.a	ENSGT01100000263493.a.a.b.b.a.a.b	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00940000159720.x	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT00940000154259.l.c.a.a.b	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT01100000263493.a.a.a.b.a.a.a.a.a.b.b.a	ENSGT00950000183039.B.b.a	ENSGT00730000111202
Rhesus	MODERN SPECIES	11	PHC3 (ENSMMUG00000022199) #7	PRKCI (ENSMMUG00000011222) #8	SKIL (ENSMMUG00000039099) #9	CLDN11 (ENSMMUG00000059260) #11	SLC7A14 (ENSMMUG00000013987) #14	ENSMMUG00000059352	ENSMMUG00000050772	RPL22L1 (ENSMMUG00000022881) #16	EIF5A2 (ENSMMUG00000022880) #17	SLC2A2 (ENSMMUG00000014385) #18	TNIK (ENSMMUG00000022262) #19	ENSMMUG00000062587	PLD1 (ENSMMUG00000023289) #20	TMEM212 (ENSMMUG00000043637) #21	ENSMMUG00000060393	FNDC3B (ENSMMUG00000004189) #22	GHSR (ENSMMUG00000004194) #23	TNFSF10 (ENSMMUG00000019302) #24	ENSMMUG00000059599	ENSMMUG00000051288	NCEH1 (ENSMMUG00000056425) #25	ECT2 (ENSMMUG00000017014) #26	SPATA16 (ENSMMUG00000040869) #29	NLGN1 (ENSMMUG00000004671) #31	ENSMMUG00000059733	NAALADL2 (ENSMMUG00000045509) #33	ENSMMUG00000010630	ENSMMUG00000059662	TBL1XR1 (ENSMMUG00000019597) #36	ENSMMUG00000055098	KCNMB2 (ENSMMUG00000014426)
Crab-eating macaque	MODERN SPECIES	11	SAMD7 (ENSMFAG00000044546)	SEC62 (ENSMFAG00000017749)	GPR160 (ENSMFAG00000028035)	PHC3 (ENSMFAG00000034130) #7	PRKCI (ENSMFAG00000042910) #8	SKIL (ENSMFAG00000029995) #9	CLDN11 (ENSMFAG00000040128) #11	SLC7A14 (ENSMFAG00000032560) #14	RPL22L1 (ENSMFAG00000041383) #16	EIF5A2 (ENSMFAG00000032595) #17	SLC2A2 (ENSMFAG00000038078) #18	TNIK (ENSMFAG00000039273) #19	ENSMFAG00000059130	PLD1 (ENSMFAG00000002954) #20	TMEM212 (ENSMFAG00000001516) #21	FNDC3B (ENSMFAG00000033083) #22	GHSR (ENSMFAG00000049961) #23	TNFSF10 (ENSMFAG00000002428) #24	ENSMFAG00000057116	ENSMFAG00000059827	NCEH1 (ENSMFAG00000043084) #25	ECT2 (ENSMFAG00000041285) #26	ENSMFAG00000035377	SPATA16 (ENSMFAG00000035575) #29	NLGN1 (ENSMFAG00000036767) #31	ENSMFAG00000024380	ENSMFAG00000064647	NAALADL2 (ENSMFAG00000000195) #33	ENSMFAG00000057081	ENSMFAG00000058101	TBL1XR1 (ENSMFAG00000007211) #36
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b.g.a #17	ENSGT00940000155235.g.a	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00390000009310.j.a.b	ENSGT00940000155015 #20	ENSGT00390000001813	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000155147.n	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00910000147646	ENSGT00940000155789 #31	ENSGT00940000154259.l.c.a.a.b	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b.d #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00910000147422
Cercopithecinae_d	ANCESTRAL SPECIES	126	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00390000003738.a.b.g.a #17	ENSGT00940000155235.g.a	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00390000009310.j.a.b	ENSGT00940000155015 #20	ENSGT00390000001813	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000155147.n	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00910000147646	ENSGT00940000155789 #31	ENSGT00940000154259.l.c.a.a.b
Drill	MODERN SPECIES	1267									ENSMLEG00000029738 #16	EIF5A2 (ENSMLEG00000033331) #17	SLC2A2 (ENSMLEG00000036416) #18	TNIK (ENSMLEG00000030929) #19	ENSMLEG00000029007	PLD1 (ENSMLEG00000036107) #20	TMEM212 (ENSMLEG00000022532) #21	FNDC3B (ENSMLEG00000032293) #22	GHSR (ENSMLEG00000030904) #23
Sooty mangabey	MODERN SPECIES	652	PRKCI (ENSCATG00000032869) #8	SKIL (ENSCATG00000036563) #9	CLDN11 (ENSCATG00000044764) #11	SLC7A14 (ENSCATG00000035259) #14	ENSCATG00000001549 ##27	ENSCATG00000039353	ENSCATG00000038395 #16	EIF5A2 (ENSCATG00000018154) #17	ENSCATG00000036414	SLC2A2 (ENSCATG00000035647) #18	TNIK (ENSCATG00000000946) #19	ENSCATG00000018704	PLD1 (ENSCATG00000033893) #20	ENSCATG00000036314	TMEM212 (ENSCATG00000036665) #21	FNDC3B (ENSCATG00000017750) #22	GHSR (ENSCATG00000044144) #23	TNFSF10 (ENSCATG00000045161) #24	ENSCATG00000031810	NCEH1 (ENSCATG00000037241) #25	ECT2 (ENSCATG00000039508) #26	SPATA16 (ENSCATG00000040546) #29	ENSCATG00000039129	NLGN1 (ENSCATG00000027014) #31	ENSCATG00000040843
Olive baboon	MODERN SPECIES	11	SEC62 (ENSPANG00000003126)	GPR160 (ENSPANG00000020830)	PHC3 (ENSPANG00000005608) #7	PRKCI (ENSPANG00000018971) #8	SKIL (ENSPANG00000009806) #9	CLDN11 (ENSPANG00000042531) #11	SLC7A14 (ENSPANG00000008188) #14	RPL22L1 (ENSPANG00000011895) #16	EIF5A2 (ENSPANG00000012399) #17	ENSPANG00000049389	SLC2A2 (ENSPANG00000011896) #18	TNIK (ENSPANG00000001281) #19	ENSPANG00000038511	PLD1 (ENSPANG00000004616) #20	TMEM212 (ENSPANG00000018154) #21	FNDC3B (ENSPANG00000021486) #22	GHSR (ENSPANG00000047978) #23	TNFSF10 (ENSPANG00000008895) #24	NCEH1 (ENSPANG00000050053) #25	ENSPANG00000048830	ECT2 (ENSPANG00000018155) #26	ENSPANG00000039329	SPATA16 (ENSPANG00000009809) #29	ENSPANG00000040437	ENSPANG00000048027	NLGN1 (ENSPANG00000004617) #31	ENSPANG00000050272	ENSPANG00000048566	ENSPANG00000042822	ENSPANG00000048384	NAALADL2 (ENSPANG00000024430) #33
Vervet Monkey	MODERN SPECIES	6	ENSCSAG00000012643	SAMD7 (ENSCSAG00000012658)	SEC62 (ENSCSAG00000012673)	GPR160 (ENSCSAG00000018887)	PHC3 (ENSCSAG00000012680) #7	PRKCI (ENSCSAG00000012687) #8	SKIL (ENSCSAG00000012694) #9	CLDN11 (ENSCSAG00000012698) #11	SLC7A14 (ENSCSAG00000012706) #14	RPL22L1 (ENSCSAG00000012716) #16	EIF5A2 (ENSCSAG00000012722) #17	SLC2A2 (ENSCSAG00000012727) #18	TNIK (ENSCSAG00000012748) #19	PLD1 (ENSCSAG00000012767) #20	TMEM212 (ENSCSAG00000012780) #21	FNDC3B (ENSCSAG00000012797) #22	GHSR (ENSCSAG00000012810) #23	TNFSF10 (ENSCSAG00000012815) #24	NCEH1 (ENSCSAG00000012823) #25	ENSCSAG00000018886	ECT2 (ENSCSAG00000012841) #26	SPATA16 (ENSCSAG00000012878) #29	NLGN1 (ENSCSAG00000012894) #31	ENSCSAG00000018885	NAALADL2 (ENSCSAG00000012912) #33	TBL1XR1 (ENSCSAG00000012927) #36	ENSCSAG00000018884	KCNMB2 (ENSCSAG00000012931)	ZMAT3 (ENSCSAG00000012935)	PIK3CA (ENSCSAG00000012948)	KCNMB3 (ENSCSAG00000012962)
Rhinopithecus	ANCESTRAL SPECIES	423													ENSGT00940000155015 #20	ENSGT00390000001813	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000155147.n	ENSGT00550000076377	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00940000159720.x	ENSGT00390000015332 #29
Golden snub-nosed monkey	MODERN SPECIES	3139													ENSRROG00000008211	ENSRROG00000044850	TMEM212 (ENSRROG00000032923) #21	FNDC3B (ENSRROG00000037113) #22	GHSR (ENSRROG00000035385) #23	TNFSF10 (ENSRROG00000028209) #24	ENSRROG00000035067	ENSRROG00000037631	NCEH1 (ENSRROG00000005602) #25	ENSRROG00000035435 #26
Black snub-nosed monkey	MODERN SPECIES	962													PLD1 (ENSRBIG00000043948) #20	ENSRBIG00000034147	TMEM212 (ENSRBIG00000040495) #21	FNDC3B (ENSRBIG00000029370) #22	GHSR (ENSRBIG00000028687) #23	TNFSF10 (ENSRBIG00000042850) #24	ENSRBIG00000036726	NCEH1 (ENSRBIG00000038472) #25	ECT2 (ENSRBIG00000038693) #26	ENSRBIG00000044257	SPATA16 (ENSRBIG00000002810) #29
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b.g.a #17	ENSGT00940000155235.g.a	ENSGT00390000003738.a.b.h #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000001813	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000155147.n	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00940000159720.x	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00910000147422
Hominidae	ANCESTRAL SPECIES	2	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b.g.a #17	ENSGT00940000155235.g.a	ENSGT00390000003738.a.b.h #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000001813	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000155147.n	ENSGT00940000156699 #25	ENSGT00550000076377	ENSGT00940000156299 #26	ENSGT00940000159720.x	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT00940000153244.B.ec.b	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E.k #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b.g.a #17	ENSGT00940000155235.g.a	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000001813	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000155147.n	ENSGT00940000156699.d #25	ENSGT00550000076377	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT00940000153244.B.ec.b	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00860000135711	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b
Gorilla	MODERN SPECIES	16	SEC62 (ENSGGOG00000013658)	ENSGGOG00000039161	PHC3 (ENSGGOG00000001986) #7	PRKCI (ENSGGOG00000010639) #8	SKIL (ENSGGOG00000026891) #9	CLDN11 (ENSGGOG00000023158) #11	SLC7A14 (ENSGGOG00000001456) #14	ENSGGOG00000038539	RPL22L1 (ENSGGOG00000041084) #16	EIF5A2 (ENSGGOG00000000434) #17	ENSGGOG00000038385	SLC2A2 (ENSGGOG00000010660) #18	TNIK (ENSGGOG00000007526) #19	PLD1 (ENSGGOG00000007868) #20	TMEM212 (ENSGGOG00000014040) #21	FNDC3B (ENSGGOG00000002990) #22	GHSR (ENSGGOG00000024411) #23	TNFSF10 (ENSGGOG00000014549) #24	ENSGGOG00000037797	NCEH1 (ENSGGOG00000012274) #25	ENSGGOG00000043359	ECT2 (ENSGGOG00000008685) #26	SPATA16 (ENSGGOG00000002411) #29	NLGN1 (ENSGGOG00000004187) #31	NAALADL2 (ENSGGOG00000043435) #33	TBL1XR1 (ENSGGOG00000009532) #36	ENSGGOG00000041945	KCNMB2 (ENSGGOG00000015779)	ZMAT3 (ENSGGOG00000009975)	PIK3CA (ENSGGOG00000009365)	KCNMB3 (ENSGGOG00000003933)
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E.k #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b.g.a #17	ENSGT00940000155235.g.a	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000001813	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000155147.n	ENSGT00940000156699.d #25	ENSGT00550000076377	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT00940000153244.B.ec.b	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00910000147422
Pan	ANCESTRAL SPECIES	2	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E.k #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b.g.a #17	ENSGT00940000155235.g.a	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000001813	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000155147.n	ENSGT00940000156699.d #25	ENSGT00550000076377	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT00940000153244.B.ec.b	ENSGT01030000234598.a.b #33	ENSGT00940000158854	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b
Bonobo	MODERN SPECIES	16	SEC62 (ENSPPAG00000039452)	GPR160 (ENSPPAG00000006084)	PHC3 (ENSPPAG00000026708) #7	PRKCI (ENSPPAG00000034072) #8	SKIL (ENSPPAG00000029978) #9	CLDN11 (ENSPPAG00000025227) #11	SLC7A14 (ENSPPAG00000043869) #14	RPL22L1 (ENSPPAG00000035219) #16	EIF5A2 (ENSPPAG00000035328) #17	ENSPPAG00000035310	SLC2A2 (ENSPPAG00000039133) #18	TNIK (ENSPPAG00000036343) #19	PLD1 (ENSPPAG00000031781) #20	ENSPPAG00000042519	TMEM212 (ENSPPAG00000027890) #21	FNDC3B (ENSPPAG00000016544) #22	GHSR (ENSPPAG00000029765) #23	TNFSF10 (ENSPPAG00000040821) #24	ENSPPAG00000036883	NCEH1 (ENSPPAG00000015341) #25	ENSPPAG00000000636	ECT2 (ENSPPAG00000040084) #26	SPATA16 (ENSPPAG00000026984) #29	NLGN1 (ENSPPAG00000030168) #31	ENSPPAG00000042448	NAALADL2 (ENSPPAG00000032916) #33	ENSPPAG00000024602	TBL1XR1 (ENSPPAG00000042757) #36	ENSPPAG00000028436	KCNMB2 (ENSPPAG00000035742)	ZMAT3 (ENSPPAG00000035483)
Chimpanzee	MODERN SPECIES	16	SEC62 (ENSPTRG00000015611)	GPR160 (ENSPTRG00000015613)	PHC3 (ENSPTRG00000015614) #7	PRKCI (ENSPTRG00000015615) #8	SKIL (ENSPTRG00000015616) #9	CLDN11 (ENSPTRG00000015617) #11	SLC7A14 (ENSPTRG00000015619) #14	RPL22L1 (ENSPTRG00000049926) #16	EIF5A2 (ENSPTRG00000015621) #17	ENSPTRG00000045886	SLC2A2 (ENSPTRG00000015623) #18	TNIK (ENSPTRG00000015624) #19	PLD1 (ENSPTRG00000015626) #20	ENSPTRG00000043296	TMEM212 (ENSPTRG00000015628) #21	FNDC3B (ENSPTRG00000015629) #22	GHSR (ENSPTRG00000015630) #23	TNFSF10 (ENSPTRG00000015631) #24	ENSPTRG00000048665	NCEH1 (ENSPTRG00000015632) #25	ENSPTRG00000050434	ECT2 (ENSPTRG00000015634) #26	SPATA16 (ENSPTRG00000015635) #29	NLGN1 (ENSPTRG00000024345) #31	ENSPTRG00000045205	NAALADL2 (ENSPTRG00000015638) #33	ENSPTRG00000034248	TBL1XR1 (ENSPTRG00000015639) #36	KCNMB2 (ENSPTRG00000041297)	ZMAT3 (ENSPTRG00000015641)	PIK3CA (ENSPTRG00000015642)
Human	MODERN SPECIES	15	SAMD7 (ENSG00000187033)	SEC62 (ENSG00000008952)	GPR160 (ENSG00000173890)	PHC3 (ENSG00000173889) #7	PRKCI (ENSG00000163558) #8	SKIL (ENSG00000136603) #9	CLDN11 (ENSG00000013297) #11	ENSG00000285218	SLC7A14 (ENSG00000013293) #14	RPL22L1 (ENSG00000163584) #16	EIF5A2 (ENSG00000163577) #17	SLC2A2 (ENSG00000163581) #18	TNIK (ENSG00000154310) #19	PLD1 (ENSG00000075651) #20	TMEM212 (ENSG00000186329) #21	FNDC3B (ENSG00000075420) #22	GHSR (ENSG00000121853) #23	TNFSF10 (ENSG00000121858) #24	NCEH1 (ENSG00000144959) #25	ECT2 (ENSG00000114346) #26	SPATA16 (ENSG00000144962) #29	NLGN1 (ENSG00000169760) #31	NAALADL2 (ENSG00000177694) #33	TBL1XR1 (ENSG00000177565) #36	KCNMB2 (ENSG00000197584)	ENSG00000275163	ZMAT3 (ENSG00000172667)	PIK3CA (ENSG00000121879)	KCNMB3 (ENSG00000171121)	ZNF639 (ENSG00000121864)	MFN1 (ENSG00000171109)
Orangutan	MODERN SPECIES	16	SAMD7 (ENSPPYG00000014284)	SEC62 (ENSPPYG00000014285)	GPR160 (ENSPPYG00000014286)	PHC3 (ENSPPYG00000014288) #7	PRKCI (ENSPPYG00000014289) #8	SKIL (ENSPPYG00000031188) #9	CLDN11 (ENSPPYG00000014291) #11	SLC7A14 (ENSPPYG00000014293) #14	RPL22L1 (ENSPPYG00000025900) #16	EIF5A2 (ENSPPYG00000014294) #17	SLC2A2 (ENSPPYG00000014295) #18	TNIK (ENSPPYG00000014296) #19	PLD1 (ENSPPYG00000014298) #20	ENSPPYG00000014299	TMEM212 (ENSPPYG00000014300) #21	FNDC3B (ENSPPYG00000014301) #22	GHSR (ENSPPYG00000014302) #23	TNFSF10 (ENSPPYG00000014303) #24	NCEH1 (ENSPPYG00000014304) #25	ENSPPYG00000014468	ECT2 (ENSPPYG00000014305) #26	ENSPPYG00000040416	SPATA16 (ENSPPYG00000014306) #29	NLGN1 (ENSPPYG00000014309) #31	ENSPPYG00000030345	NAALADL2 (ENSPPYG00000014311) #33	ENSPPYG00000014312	TBL1XR1 (ENSPPYG00000033167) #36	KCNMB2 (ENSPPYG00000014313)	ENSPPYG00000014315	PIK3CA (ENSPPYG00000025901)
Gibbon	MODERN SPECIES	1	ENSNLEG00000034406	SEC62 (ENSNLEG00000005155)	PHC3 (ENSNLEG00000005181) #7	PRKCI (ENSNLEG00000005225) #8	SKIL (ENSNLEG00000035512) #9	CLDN11 (ENSNLEG00000005269) #11	SLC7A14 (ENSNLEG00000005278) #14	ENSNLEG00000030729 #16	EIF5A2 (ENSNLEG00000005292) #17	ENSNLEG00000027572	SLC2A2 (ENSNLEG00000005297) #18	TNIK (ENSNLEG00000005318) #19	PLD1 (ENSNLEG00000005457) #20	ENSNLEG00000031506	TMEM212 (ENSNLEG00000005473) #21	FNDC3B (ENSNLEG00000005477) #22	GHSR (ENSNLEG00000005544) #23	TNFSF10 (ENSNLEG00000005545) #24	ENSNLEG00000035870	NCEH1 (ENSNLEG00000005559) #25	ECT2 (ENSNLEG00000005565) #26	SPATA16 (ENSNLEG00000005617) #29	NLGN1 (ENSNLEG00000005618) #31	NAALADL2 (ENSNLEG00000005623) #33	TBL1XR1 (ENSNLEG00000005631) #36	ENSNLEG00000029452	KCNMB2 (ENSNLEG00000005652)	ZMAT3 (ENSNLEG00000005658)	PIK3CA (ENSNLEG00000005661)	ENSNLEG00000005735	ENSNLEG00000031548
Platyrrhini	ANCESTRAL SPECIES	22	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000001813	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00860000135711
Cebidae	ANCESTRAL SPECIES	22	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000001813	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00860000135711
Cebidae_a	ANCESTRAL SPECIES	12	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000001813	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00860000135711
Bolivian squirrel monkey	MODERN SPECIES	54	MRPL3 (ENSSBOG00000021018)	ENSSBOG00000035781	ENSSBOG00000033863	NEK11 (ENSSBOG00000016313)	ASTE1 (ENSSBOG00000021139)	ATP2C1 (ENSSBOG00000025904)	ENSSBOG00000023856	PIK3R4 (ENSSBOG00000033594)	COL6A6 (ENSSBOG00000027757)	COL6A5 (ENSSBOG00000022269)	SLC2A2 (ENSSBOG00000019413) #18	TNIK (ENSSBOG00000027380) #19	PLD1 (ENSSBOG00000024875) #20	ENSSBOG00000016746	TMEM212 (ENSSBOG00000021220) #21	FNDC3B (ENSSBOG00000024022) #22	GHSR (ENSSBOG00000026382) #23	TNFSF10 (ENSSBOG00000031527) #24	NCEH1 (ENSSBOG00000031890) #25	ECT2 (ENSSBOG00000030797) #26	SPATA16 (ENSSBOG00000029188) #29	NLGN1 (ENSSBOG00000032454) #31	ENSSBOG00000019640	NAALADL2 (ENSSBOG00000024409) #33	ENSSBOG00000020649	TBL1XR1 (ENSSBOG00000026417) #36	ENSSBOG00000023204	ENSSBOG00000029008
Capuchin	MODERN SPECIES	61	OPTN (ENSCCAG00000034418)	CCDC3 (ENSCCAG00000031972)	CAMK1D (ENSCCAG00000024535)	CDC123 (ENSCCAG00000023475)	ENSCCAG00000030198	SEC61A2 (ENSCCAG00000024207)	DHTKD1 (ENSCCAG00000031587)	UPF2 (ENSCCAG00000035991)	PROSER2 (ENSCCAG00000032607)	ECHDC3 (ENSCCAG00000023126)	EIF5A2 (ENSCCAG00000023587) #17	SLC2A2 (ENSCCAG00000035841) #18	TNIK (ENSCCAG00000035042) #19	PLD1 (ENSCCAG00000029398) #20	TMEM212 (ENSCCAG00000029297) #21	FNDC3B (ENSCCAG00000034965) #22	GHSR (ENSCCAG00000028148) #23	TNFSF10 (ENSCCAG00000033124) #24	NCEH1 (ENSCCAG00000026525) #25	ECT2 (ENSCCAG00000031591) #26	PCDH17 (ENSCCAG00000029997)	ENSCCAG00000035660
Marmoset	MODERN SPECIES	8	CLDN11 (ENSCJAG00000043153) #11	SLC7A14 (ENSCJAG00000002451) #14	ENSCJAG00000077341	ENSCJAG00000047068	ENSCJAG00000044799	RPL22L1 (ENSCJAG00000002427) #16	EIF5A2 (ENSCJAG00000002422) #17	SLC2A2 (ENSCJAG00000002414) #18	ENSCJAG00000076175	ENSCJAG00000083254	TNIK (ENSCJAG00000002326) #19	ENSCJAG00000078263	PLD1 (ENSCJAG00000002296) #20	TMEM212 (ENSCJAG00000002292) #21	ENSCJAG00000072107	FNDC3B (ENSCJAG00000002213) #22	GHSR (ENSCJAG00000002211) #23	TNFSF10 (ENSCJAG00000086478) #24	ENSCJAG00000078530	ECT2 (ENSCJAG00000002129) #26	NCEH1 (ENSCJAG00000074580) #25	ENSCJAG00000073535	SPATA16 (ENSCJAG00000002119) #29	ENSCJAG00000081817	NLGN1 (ENSCJAG00000002114) #31	ENSCJAG00000077913	ENSCJAG00000085114	ENSCJAG00000075956	NAALADL2 (ENSCJAG00000031211) #33	ENSCJAG00000071672	ENSCJAG00000061157
Mas night monkey	MODERN SPECIES	309	ENSANAG00000025120	PP2D1 (ENSANAG00000022659)	ENSANAG00000031028	SGO1 (ENSANAG00000031972)	ZNF385D (ENSANAG00000037942)	UBE2E2 (ENSANAG00000030198)	UBE2E1 (ENSANAG00000034758)	NKIRAS1 (ENSANAG00000022566)	ENSANAG00000009168	EIF5A2 (ENSANAG00000020961) #17	SLC2A2 (ENSANAG00000032556) #18	TNIK (ENSANAG00000030180) #19	PLD1 (ENSANAG00000027126) #20	ENSANAG00000021644	TMEM212 (ENSANAG00000022568) #21	FNDC3B (ENSANAG00000030044) #22	GHSR (ENSANAG00000020011) #23	TNFSF10 (ENSANAG00000030305) #24	NCEH1 (ENSANAG00000011252) #25	ECT2 (ENSANAG00000030197) #26	SPATA16 (ENSANAG00000025131) #29	NLGN1 (ENSANAG00000008187) #31	ENSANAG00000021108	ENSANAG00000002410
Tarsier	MODERN SPECIES	3881															TMEM212 (ENSTSYG00000010136) #21	FNDC3B (ENSTSYG00000007294) #22	GHSR (ENSTSYG00000033813) #23
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000182224	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00860000135711	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Lemuriformes	ANCESTRAL SPECIES	9	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000182224	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00860000135711	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Mouse lemur	MODERN SPECIES		SEC62 (ENSMICG00000048942)	GPR160 (ENSMICG00000049558)	PHC3 (ENSMICG00000049074) #7	PRKCI (ENSMICG00000048940) #8	SKIL (ENSMICG00000049220) #9	CLDN11 (ENSMICG00000048893) #11	SLC7A14 (ENSMICG00000048929) #14	RPL22L1 (ENSMICG00000049215) #16	EIF5A2 (ENSMICG00000049338) #17	SLC2A2 (ENSMICG00000049076) #18	ENSMICG00000049283	TNIK (ENSMICG00000049397) #19	ENSMICG00000049473	PLD1 (ENSMICG00000049434) #20	TMEM212 (ENSMICG00000048602) #21	FNDC3B (ENSMICG00000049279) #22	GHSR (ENSMICG00000049355) #23	TNFSF10 (ENSMICG00000049347) #24	NCEH1 (ENSMICG00000049131) #25	ECT2 (ENSMICG00000049582) #26	SPATA16 (ENSMICG00000049271) #29	NLGN1 (ENSMICG00000049574) #31	NAALADL2 (ENSMICG00000048670) #33	ENSMICG00000048980	TBL1XR1 (ENSMICG00000049448) #36	ENSMICG00000049180	KCNMB2 (ENSMICG00000049491)	ZMAT3 (ENSMICG00000049501)	PIK3CA (ENSMICG00000049155)	KCNMB3 (ENSMICG00000048999)	ENSMICG00000048810
Lemuriformes_a	ANCESTRAL SPECIES	9	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Greater bamboo lemur	MODERN SPECIES	410													TNIK (ENSPSMG00000016825) #19	PLD1 (ENSPSMG00000016300) #20	TMEM212 (ENSPSMG00000016184) #21	FNDC3B (ENSPSMG00000016159) #22	GHSR (ENSPSMG00000016081) #23	TNFSF10 (ENSPSMG00000016074) #24	NCEH1 (ENSPSMG00000016040) #25	ECT2 (ENSPSMG00000015943) #26	SPATA16 (ENSPSMG00000015748) #29	ENSPSMG00000015718	NLGN1 (ENSPSMG00000015706) #31	NAALADL2 (ENSPSMG00000015690) #33	TBL1XR1 (ENSPSMG00000015636) #36	ENSPSMG00000015530	ENSPSMG00000015513	KCNMB2 (ENSPSMG00000015503)	ENSPSMG00000015400	GPC5 (ENSPSMG00000015390)
Coquerels sifaka	MODERN SPECIES	191	SEC62 (ENSPCOG00000022507)	ENSPCOG00000022512	PHC3 (ENSPCOG00000028442) #7	PRKCI (ENSPCOG00000013776) #8	SKIL (ENSPCOG00000011788) #9	ENSPCOG00000012902	CLDN11 (ENSPCOG00000002365) #11	SLC7A14 (ENSPCOG00000006725) #14	RPL22L1 (ENSPCOG00000028048) #16	EIF5A2 (ENSPCOG00000020505) #17	SLC2A2 (ENSPCOG00000015126) #18	TNIK (ENSPCOG00000021438) #19	ENSPCOG00000024932	PLD1 (ENSPCOG00000000579) #20	TMEM212 (ENSPCOG00000011596) #21	FNDC3B (ENSPCOG00000021925) #22	GHSR (ENSPCOG00000025671) #23	TNFSF10 (ENSPCOG00000024107) #24	NCEH1 (ENSPCOG00000004999) #25	ENSPCOG00000022446	ECT2 (ENSPCOG00000027208) #26	SPATA16 (ENSPCOG00000015351) #29	ENSPCOG00000011665	NLGN1 (ENSPCOG00000007226) #31	ENSPCOG00000011977	ENSPCOG00000016264	TBL1XR1 (ENSPCOG00000024766) #36
Bushbaby	MODERN SPECIES	193															PLD1 (ENSOGAG00000010239) #20	FNDC3B (ENSOGAG00000007902) #22	GHSR (ENSOGAG00000033442) #23	TNFSF10 (ENSOGAG00000009094) #24	NCEH1 (ENSOGAG00000000976) #25	ECT2 (ENSOGAG00000003365) #26	SPATA16 (ENSOGAG00000001358) #29	NLGN1 (ENSOGAG00000012761) #31	NAALADL2 (ENSOGAG00000005833) #33	TBL1XR1 (ENSOGAG00000006708) #36	ENSOGAG00000034666	KCNMB2 (ENSOGAG00000015737)	ZMAT3 (ENSOGAG00000003252)	ENSOGAG00000027303	PIK3CA (ENSOGAG00000006592)	KCNMB3 (ENSOGAG00000006601)	ENSOGAG00000034726
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Carnivora	ANCESTRAL SPECIES	10	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00390000005534.b.b.d	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Caniformia	ANCESTRAL SPECIES		ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00390000005534.b.b.d	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Caniformia_b	ANCESTRAL SPECIES		ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00390000005534.b.b.d	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Ursidae	ANCESTRAL SPECIES	1	ENSGT00390000002757	ENSGT00950000185675	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509.q.a #16	ENSGT00390000003738.a.b.d #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00390000005534.b.b.d	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000154268.e.a.jb.b	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000185097.a	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b
Ursus	ANCESTRAL SPECIES	22	ENSGT00390000002757	ENSGT00950000185675	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509.q.a #16	ENSGT00390000003738.a.b.d #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00390000005534.b.b.d	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000154268.e.a.jb.b	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000185097.a	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b
Polar bear	MODERN SPECIES	270	ENSUMAG00000011518	GPR160 (ENSUMAG00000011512)	PHC3 (ENSUMAG00000011494) #7	PRKCI (ENSUMAG00000010638) #8	SKIL (ENSUMAG00000010506) #9	CLDN11 (ENSUMAG00000010499) #11	SLC7A14 (ENSUMAG00000010488) #14	ENSUMAG00000010477	ENSUMAG00000010462 #16	EIF5A2 (ENSUMAG00000010451) #17	SLC2A2 (ENSUMAG00000010439) #18	TNIK (ENSUMAG00000010387) #19	ENSUMAG00000010372	PLD1 (ENSUMAG00000009364) #20	TMEM212 (ENSUMAG00000009254) #21	FNDC3B (ENSUMAG00000008283) #22	GHSR (ENSUMAG00000008081) #23	TNFSF10 (ENSUMAG00000008069) #24	NCEH1 (ENSUMAG00000008062) #25	ENSUMAG00000008030 #26	ENSUMAG00000008026 #26	SPATA16 (ENSUMAG00000008006) #29	ENSUMAG00000007969	NLGN1 (ENSUMAG00000007957) #31	NAALADL2 (ENSUMAG00000007923) #33	ENSUMAG00000007910	ENSUMAG00000007898	TBL1XR1 (ENSUMAG00000007886) #36	ENSUMAG00000007876	KCNMB2 (ENSUMAG00000007875)	ZMAT3 (ENSUMAG00000007847)
American black bear	MODERN SPECIES	5875																FNDC3B (ENSUAMG00000018505) #22
Giant Panda	MODERN SPECIES		SAMD7 (ENSAMEG00000004606)	SEC62 (ENSAMEG00000004609)	ENSAMEG00000026594	GPR160 (ENSAMEG00000019438)	PHC3 (ENSAMEG00000004625) #7	PRKCI (ENSAMEG00000004662) #8	SKIL (ENSAMEG00000004676) #9	CLDN11 (ENSAMEG00000029228) #11	SLC7A14 (ENSAMEG00000004703) #14	ENSAMEG00000004730 #16	EIF5A2 (ENSAMEG00000025642) #17	SLC2A2 (ENSAMEG00000004758) #18	TNIK (ENSAMEG00000004798) #19	PLD1 (ENSAMEG00000000864) #20	TMEM212 (ENSAMEG00000000944) #21	FNDC3B (ENSAMEG00000000947) #22	GHSR (ENSAMEG00000000992) #23	TNFSF10 (ENSAMEG00000000999) #24	NCEH1 (ENSAMEG00000026170) #25	ECT2 (ENSAMEG00000001035) #26	SPATA16 (ENSAMEG00000001100) #29	NLGN1 (ENSAMEG00000001461) #31	NAALADL2 (ENSAMEG00000010705) #33	ENSAMEG00000029929	ENSAMEG00000031369	TBL1XR1 (ENSAMEG00000010711) #36	ENSAMEG00000028254	KCNMB2 (ENSAMEG00000010737)	ZMAT3 (ENSAMEG00000010742)	PIK3CA (ENSAMEG00000010753)	KCNMB3 (ENSAMEG00000010807)
Mustelinae	ANCESTRAL SPECIES	20	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
American mink	MODERN SPECIES	87	LRRC31 (ENSNVIG00000013341)	SAMD7 (ENSNVIG00000013316)	SEC62 (ENSNVIG00000013294)	PHC3 (ENSNVIG00000013173) #7	KPCI (ENSNVIG00000013126) #8	SKIL (ENSNVIG00000013102) #9	CLD11 (ENSNVIG00000013090) #11	SLC7A14 (ENSNVIG00000013079) #14	ENSNVIG00000013068	ENSNVIG00000013052 #16	IF5A2 (ENSNVIG00000013022) #17	SLC2A2 (ENSNVIG00000012980) #18	TNIK (ENSNVIG00000012527) #19	PLD1 (ENSNVIG00000012414) #20	TMEM212 (ENSNVIG00000012401) #21	FNDC3B (ENSNVIG00000012258) #22	GHSR (ENSNVIG00000012236) #23	ENSNVIG00000012221	NCEH1 (ENSNVIG00000012189) #25	ECT2 (ENSNVIG00000011984) #26	SPATA16 (ENSNVIG00000011957) #29	NLGN1 (ENSNVIG00000011926) #31
Ferret	MODERN SPECIES	216	ENSMPUG00000017106	GPR160 (ENSMPUG00000018913)	PHC3 (ENSMPUG00000017107) #7	PRKCI (ENSMPUG00000017108) #8	ENSMPUG00000017109	SKIL (ENSMPUG00000017110) #9	CLDN11 (ENSMPUG00000017111) #11	SLC7A14 (ENSMPUG00000017112) #14	RPL22L1 (ENSMPUG00000017113) #16	EIF5A2 (ENSMPUG00000017115) #17	SLC2A2 (ENSMPUG00000017116) #18	TNIK (ENSMPUG00000017145) #19	ENSMPUG00000017151	PLD1 (ENSMPUG00000017152) #20	TMEM212 (ENSMPUG00000017156) #21	FNDC3B (ENSMPUG00000017158) #22	GHSR (ENSMPUG00000017162) #23	TNFSF10 (ENSMPUG00000017166) #24	NCEH1 (ENSMPUG00000017172) #25	ECT2 (ENSMPUG00000017173) #26	SPATA16 (ENSMPUG00000017177) #29	ENSMPUG00000017179 #31	ENSMPUG00000017180 #31	ENSMPUG00000018916	ENSMPUG00000017193	NAALADL2 (ENSMPUG00000017199) #33	ENSMPUG00000017200	TBL1XR1 (ENSMPUG00000017202) #36	KCNMB2 (ENSMPUG00000017205)	ZMAT3 (ENSMPUG00000017206)	PIK3CA (ENSMPUG00000017207)
Canidae	ANCESTRAL SPECIES	43	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00950000182989.D.a.b.p	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00980000198999	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT01030000235502
Canis_lupus	ANCESTRAL SPECIES	41	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00950000182989.D.a.b.p	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00980000198999	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT01030000235502
Dog	MODERN SPECIES	27	GPR160 (ENSCAFG00845021607)	PHC3 (ENSCAFG00845021760) #7	PRKCI (ENSCAFG00845022436) #8	SKIL (ENSCAFG00845022824) #9	CLDN11 (ENSCAFG00845022889) #11	ENSCAFG00845022955 #14	ENSCAFG00845023034	ENSCAFG00845023102	ENSCAFG00845023141 #16	EIF5A2 (ENSCAFG00845023206) #17	SLC2A2 (ENSCAFG00845023320) #18	ENSCAFG00845023386	TNIK (ENSCAFG00845023590) #19	PLD1 (ENSCAFG00845024801) #20	TMEM212 (ENSCAFG00845025495) #21	FNDC3B (ENSCAFG00845025535) #22	GHSR (ENSCAFG00845025708) #23	TNFSF10 (ENSCAFG00845025786) #24	NCEH1 (ENSCAFG00845025863) #25	ECT2 (ENSCAFG00845025956) #26	SPATA16 (ENSCAFG00845014909) #29	NLGN1 (ENSCAFG00845015115) #31	NAALADL2 (ENSCAFG00845015266) #33	ENSCAFG00845015434	TBL1XR1 (ENSCAFG00845015474) #36	KCNMB2 (ENSCAFG00845015513)	ENSCAFG00845015561	ENSCAFG00845015597
Dingo	MODERN SPECIES	317	PHC3 (ENSCAFG00020000759) #7	PRKCI (ENSCAFG00020001182) #8	SKIL (ENSCAFG00020003889) #9	CLDN11 (ENSCAFG00020003902) #11	SLC7A14 (ENSCAFG00020003904) #14	ENSCAFG00020003928	ENSCAFG00020003931 #16	EIF5A2 (ENSCAFG00020003939) #17	ENSCAFG00020003946 ##13	SLC2A2 (ENSCAFG00020003949) #18	ENSCAFG00020003964	ENSCAFG00020003970	ENSCAFG00020004120 #19	PLD1 (ENSCAFG00020004212) #20	TMEM212 (ENSCAFG00020004412) #21	FNDC3B (ENSCAFG00020004443) #22	GHSR (ENSCAFG00020004605) #23	TNFSF10 (ENSCAFG00020004618) #24	ENSCAFG00020004622 #25	ECT2 (ENSCAFG00020004635) #26	SPATA16 (ENSCAFG00020004681) #29	NLGN1 (ENSCAFG00020004713) #31	NAALADL2 (ENSCAFG00020004751) #33	ENSCAFG00020004812	TBL1XR1 (ENSCAFG00020004830) #36	KCNMB2 (ENSCAFG00020004843)	ENSCAFG00020004855
Red fox	MODERN SPECIES	66	PHC3 (ENSVVUG00000000912) #7	ENSVVUG00000001040	PRKCI (ENSVVUG00000001057) #8	SKIL (ENSVVUG00000001083) #9	CLDN11 (ENSVVUG00000001091) #11	SLC7A14 (ENSVVUG00000001102) #14	ENSVVUG00000001121	RPL22L1 (ENSVVUG00000001132) #16	EIF5A2 (ENSVVUG00000001140) #17	ENSVVUG00000001154 ##13	SLC2A2 (ENSVVUG00000001163) #18	ENSVVUG00000001177	TNIK (ENSVVUG00000001221) #19	PLD1 (ENSVVUG00000001416) #20	TMEM212 (ENSVVUG00000001592) #21	FNDC3B (ENSVVUG00000001630) #22	GHSR (ENSVVUG00000001716) #23	TNFSF10 (ENSVVUG00000001732) #24	NCEH1 (ENSVVUG00000001743) #25	ENSVVUG00000001754	ECT2 (ENSVVUG00000001784) #26	SPATA16 (ENSVVUG00000001877) #29	NLGN1 (ENSVVUG00000001921) #31	NAALADL2 (ENSVVUG00000001942) #33	ENSVVUG00000001970
Felidae	ANCESTRAL SPECIES	9	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00390000005534.b.b.d	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Panthera	ANCESTRAL SPECIES	12	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00390000005599.l.a.a #32	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00390000005534.b.b.d	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335
Panthera_a	ANCESTRAL SPECIES	17	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00390000005599.l.a.a #32	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00390000005534.b.b.d	ENSGT00940000155789 #31	ENSGT00940000158200	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a
leopard	MODERN SPECIES	41										RPL22L1 (ENSPPRG00000012978) #16	EIF5A2 (ENSPPRG00000012743) #17	SLC2A2 (ENSPPRG00000012219) #18	TNIK (ENSPPRG00000011685) #19	PLD1 (ENSPPRG00000023176) #20	TMEM212 (ENSPPRG00000023938) #21	FNDC3B (ENSPPRG00000024055) #22	GHSR (ENSPPRG00000017062) #23	TNFSF10 (ENSPPRG00000016479) #24	NCEH1 (ENSPPRG00000015653) #25	ECT2 (ENSPPRG00000014700) #26	ENSPPRG00000011572	SPATA16 (ENSPPRG00000010517) #29	ENSPPRG00000010020	NLGN1 (ENSPPRG00000009803) #31	ENSPPRG00000009449	NAALADL2 (ENSPPRG00000008765) #33	ENSPPRG00000008440	ENSPPRG00000008283	ENSPPRG00000014311	TBL1XR1 (ENSPPRG00000007211) #36	KCNMB2 (ENSPPRG00000005379)
lion	MODERN SPECIES	9	LRRC31 (ENSPLOG00000011479)	SAMD7 (ENSPLOG00000011706)	SEC62 (ENSPLOG00000011790)	PHC3 (ENSPLOG00000011902) #7	PRKCI (ENSPLOG00000012230) #8	SKIL (ENSPLOG00000012378) #9	CLDN11 (ENSPLOG00000012448) #11	SLC7A14 (ENSPLOG00000012494) #14	ENSPLOG00000012571 #32	RPL22L1 (ENSPLOG00000012600) #16	EIF5A2 (ENSPLOG00000012678) #17	SLC2A2 (ENSPLOG00000012729) #18	TNIK (ENSPLOG00000012878) #19	PLD1 (ENSPLOG00000013081) #20	TMEM212 (ENSPLOG00000013184) #21	FNDC3B (ENSPLOG00000013235) #22	GHSR (ENSPLOG00000013263) #23	TNFSF10 (ENSPLOG00000013296) #24	NCEH1 (ENSPLOG00000013340) #25	ECT2 (ENSPLOG00000013475) #26	SPATA16 (ENSPLOG00000013657) #29	NLGN1 (ENSPLOG00000013747) #31	ENSPLOG00000013820	NAALADL2 (ENSPLOG00000013868) #33	ENSPLOG00000014025	TBL1XR1 (ENSPLOG00000014076) #36	ENSPLOG00000014169	KCNMB2 (ENSPLOG00000014199)	ZMAT3 (ENSPLOG00000014350)	PIK3CA (ENSPLOG00000014416)	KCNMB3 (ENSPLOG00000014563)
Tiger	MODERN SPECIES	96	SAMD7 (ENSPTIG00000013944)	SEC62 (ENSPTIG00000015580)	GPR160 (ENSPTIG00000006053)	PHC3 (ENSPTIG00000016643) #7	PRKCI (ENSPTIG00000019351) #8	SKIL (ENSPTIG00000020199) #9	CLDN11 (ENSPTIG00000003917) #11	SLC7A14 (ENSPTIG00000005534) #14	ENSPTIG00000006249 #32	RPL22L1 (ENSPTIG00000006759) #16	EIF5A2 (ENSPTIG00000008555) #17	SLC2A2 (ENSPTIG00000010647) #18	TNIK (ENSPTIG00000011418) #19	PLD1 (ENSPTIG00000012824) #20	TMEM212 (ENSPTIG00000017093) #21	FNDC3B (ENSPTIG00000017594) #22	GHSR (ENSPTIG00000008219) #23	TNFSF10 (ENSPTIG00000008663) #24	NCEH1 (ENSPTIG00000009609) #25	ECT2 (ENSPTIG00000010374) #26	SPATA16 (ENSPTIG00000013827) #29	NLGN1 (ENSPTIG00000014079) #31
Cat	MODERN SPECIES	240	LRRC31 (ENSFCAG00000004403)	SAMD7 (ENSFCAG00000004404)	SEC62 (ENSFCAG00000026086)	GPR160 (ENSFCAG00000030840)	PHC3 (ENSFCAG00000025428) #7	PRKCI (ENSFCAG00000026908) #8	SKIL (ENSFCAG00000031064) #9	CLDN11 (ENSFCAG00000030525) #11	SLC7A14 (ENSFCAG00000011219) #14	RPL22L1 (ENSFCAG00000046255) #16	EIF5A2 (ENSFCAG00000008098) #17	SLC2A2 (ENSFCAG00000011216) #18	TNIK (ENSFCAG00000011217) #19	PLD1 (ENSFCAG00000007116) #20	TMEM212 (ENSFCAG00000011654) #21	FNDC3B (ENSFCAG00000000762) #22	GHSR (ENSFCAG00000011266) #23	TNFSF10 (ENSFCAG00000045697) #24	NCEH1 (ENSFCAG00000028457) #25	ECT2 (ENSFCAG00000018600) #26	SPATA16 (ENSFCAG00000010284) #29	NLGN1 (ENSFCAG00000008779) #31	ENSFCAG00000038414	NAALADL2 (ENSFCAG00000041177) #33	TBL1XR1 (ENSFCAG00000002457) #36	ENSFCAG00000041738	KCNMB2 (ENSFCAG00000006044)	ZMAT3 (ENSFCAG00000014578)	PIK3CA (ENSFCAG00000018737)	KCNMB3 (ENSFCAG00000041547)	ZNF639 (ENSFCAG00000012004)
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Equus	ANCESTRAL SPECIES	19	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000165953	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00390000012420.j	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00990000205077	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a
Donkey	MODERN SPECIES	25	SEC62 (ENSEASG00005017229)	ENSEASG00005017228	GPR160 (ENSEASG00005025435)	PHC3 (ENSEASG00005017223) #7	PRKCI (ENSEASG00005017222) #8	SKIL (ENSEASG00005017221) #9	CLDN11 (ENSEASG00005028697) #11	ENSEASG00005017220	SLC7A14 (ENSEASG00005017219) #14	RPL22L1 (ENSEASG00005027584) #16	EIF5A2 (ENSEASG00005017215) #17	SLC2A2 (ENSEASG00005017211) #18	TNIK (ENSEASG00005017205) #19	PLD1 (ENSEASG00005017200) #20	TMEM212 (ENSEASG00005017199) #21	FNDC3B (ENSEASG00005017198) #22	GHSR (ENSEASG00005026008) #23	TNFSF10 (ENSEASG00005032698) #24	ENSEASG00005024553	ENSEASG00005038780	NCEH1 (ENSEASG00005017188) #25	ECT2 (ENSEASG00005016949) #26	SPATA16 (ENSEASG00005016917) #29	NLGN1 (ENSEASG00005033409) #31	NAALADL2 (ENSEASG00005016907) #33	ENSEASG00005016908	ENSEASG00005036049	TBL1XR1 (ENSEASG00005016897) #36	KCNMB2 (ENSEASG00005016891)	ZMAT3 (ENSEASG00005016887)	PIK3CA (ENSEASG00005016884)
Horse	MODERN SPECIES	10	SEC62 (ENSECAG00000017105)	GPR160 (ENSECAG00000005959)	PHC3 (ENSECAG00000006043) #7	PRKCI (ENSECAG00000014142) #8	SKIL (ENSECAG00000010663) #9	CLDN11 (ENSECAG00000028842) #11	ENSECAG00000034451	SLC7A14 (ENSECAG00000014878) #14	RPL22L1 (ENSECAG00000018894) #16	EIF5A2 (ENSECAG00000022755) #17	SLC2A2 (ENSECAG00000000414) #18	TNIK (ENSECAG00000018307) #19	PLD1 (ENSECAG00000022638) #20	TMEM212 (ENSECAG00000028524) #21	ENSECAG00000044903	FNDC3B (ENSECAG00000019423) #22	GHSR (ENSECAG00000017722) #23	TNFSF10 (ENSECAG00000019391) #24	ENSECAG00000008286	NCEH1 (ENSECAG00000010106) #25	ECT2 (ENSECAG00000014059) #26	SPATA16 (ENSECAG00000012480) #29	NLGN1 (ENSECAG00000012940) #31	NAALADL2 (ENSECAG00000016282) #33	ENSECAG00000045243	ENSECAG00000052492	ENSECAG00000053463	ENSECAG00000049777	ENSECAG00000048291	ENSECAG00000049616	TBL1XR1 (ENSECAG00000008249) #36
Chiroptera	ANCESTRAL SPECIES	13	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Microchiroptera	ANCESTRAL SPECIES	11	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Greater horseshoe bat	MODERN SPECIES	11	SEC62 (ENSRFEG00010001586)	ENSRFEG00010001573	GPR160 (ENSRFEG00010001564)	ENSRFEG00010001545	PHC3 (ENSRFEG00010001349) #7	PRKCI (ENSRFEG00010001239) #8	SKIL (ENSRFEG00010001192) #9	CLDN11 (ENSRFEG00010001153) #11	SLC7A14 (ENSRFEG00010001129) #14	ENSRFEG00010001102 #16	EIF5A2 (ENSRFEG00010001071) #17	SLC2A2 (ENSRFEG00010001037) #18	TNIK (ENSRFEG00010000693) #19	PLD1 (ENSRFEG00010000516) #20	TMEM212 (ENSRFEG00010000449) #21	FNDC3B (ENSRFEG00010000387) #22	GHSR (ENSRFEG00010000370) #23	TNFSF10 (ENSRFEG00010000343) #24	NCEH1 (ENSRFEG00010000317) #25	ENSRFEG00010000278 #26	SPATA16 (ENSRFEG00010000235) #29	ENSRFEG00010000208	NLGN1 (ENSRFEG00010000199) #31	ENSRFEG00010000186	NAALADL2 (ENSRFEG00010000176) #33	ENSRFEG00010000156	TBL1XR1 (ENSRFEG00010000145) #36	KCNMB2 (ENSRFEG00010000136)	ZMAT3 (ENSRFEG00010000131)	ENSRFEG00010000122	PIK3CA (ENSRFEG00010021761)
Microbat	MODERN SPECIES	990	SEC62 (ENSMLUG00000002555)	GPR160 (ENSMLUG00000002560)	PHC3 (ENSMLUG00000002575) #7	ENSMLUG00000026025	ENSMLUG00000028631	PRKCI (ENSMLUG00000006267) #8	SKIL (ENSMLUG00000014951) #9	CLDN11 (ENSMLUG00000014961) #11	SLC7A14 (ENSMLUG00000011496) #14	ENSMLUG00000027683 #16	ENSMLUG00000015392 #17	SLC2A2 (ENSMLUG00000016201) #18	TNIK (ENSMLUG00000016212) #19	PLD1 (ENSMLUG00000003478) #20	TMEM212 (ENSMLUG00000025537) #21	FNDC3B (ENSMLUG00000000007) #22	GHSR (ENSMLUG00000000008) #23	TNFSF10 (ENSMLUG00000028380) #24	NCEH1 (ENSMLUG00000013647) #25	ECT2 (ENSMLUG00000013658) #26	SPATA16 (ENSMLUG00000015315) #29
Megabat	MODERN SPECIES	2887																FNDC3B (ENSPVAG00000012365) #22
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Suina	ANCESTRAL SPECIES	1	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Pig	MODERN SPECIES	4	SEC62 (ENSSSCG00000029608)	GPR160 (ENSSSCG00000035883)	ENSSSCG00000051128	PHC3 (ENSSSCG00000030467) #7	PRKCI (ENSSSCG00000011745) #8	SKIL (ENSSSCG00000011746) #9	CLDN11 (ENSSSCG00000011747) #11	SLC7A14 (ENSSSCG00000011748) #14	ENSSSCG00000053073	ENSSSCG00000036114 #16	EIF5A2 (ENSSSCG00000040946) #17	SLC2A2 (ENSSSCG00000020927) #18	TNIK (ENSSSCG00000028905) #19	PLD1 (ENSSSCG00000011750) #20	TMEM212 (ENSSSCG00000011751) #21	FNDC3B (ENSSSCG00000011752) #22	GHSR (ENSSSCG00000020906) #23	NCEH1 (ENSSSCG00000011755) #25	ECT2 (ENSSSCG00000035746) #26	SPATA16 (ENSSSCG00000038177) #29	ENSSSCG00000043958	ENSSSCG00000044967	NLGN1 (ENSSSCG00000011756) #31	ENSSSCG00000062281	ENSSSCG00000011758	ENSSSCG00000044757	NAALADL2 (ENSSSCG00000023871) #33	TBL1XR1 (ENSSSCG00000011760) #36	ENSSSCG00000043076	ENSSSCG00000047877	KCNMB2 (ENSSSCG00000011761)
Chacoan peccary	MODERN SPECIES	944	SAMD7 (ENSCWAG00000010654)	SEC62 (ENSCWAG00000010703)	GPR160 (ENSCWAG00000010731)	PHC3 (ENSCWAG00000010765) #7	PRKCI (ENSCWAG00000011163) #8	ENSCWAG00000011358	SKIL (ENSCWAG00000011403) #9	CLDN11 (ENSCWAG00000011474) #11	SLC7A14 (ENSCWAG00000011516) #14	RPL22L1 (ENSCWAG00000011588) #16	EIF5A2 (ENSCWAG00000011691) #17	SLC2A2 (ENSCWAG00000011744) #18	TNIK (ENSCWAG00000011893) #19	PLD1 (ENSCWAG00000012348) #20	TMEM212 (ENSCWAG00000012483) #21	FNDC3B (ENSCWAG00000012530) #22	ENSCWAG00000012660	GHSR (ENSCWAG00000012668) #23	TNFSF10 (ENSCWAG00000012722) #24	NCEH1 (ENSCWAG00000012786) #25	ECT2 (ENSCWAG00000012868) #26	SPATA16 (ENSCWAG00000013214) #29	NLGN1 (ENSCWAG00000013308) #31	NAALADL2 (ENSCWAG00000013390) #33	TBL1XR1 (ENSCWAG00000013528) #36	ENSCWAG00000013558	KCNMB2 (ENSCWAG00000013602)	ZMAT3 (ENSCWAG00000013667)	PIK3CA (ENSCWAG00000013715)	KCNMB3 (ENSCWAG00000013862)	ZNF639 (ENSCWAG00000014049)
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Cetacea	ANCESTRAL SPECIES	10	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435.i #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT01030000239371	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335.a	ENSGT00390000013727.d
Odontoceti	ANCESTRAL SPECIES	9	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435.i #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT01030000239371	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00960000192355	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335.a
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435.i #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00960000192355	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00500000045333.c.b.b	ENSGT00940000156335.a
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00940000156456	ENSGT00940000161601	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435.i #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00960000192355	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00500000045333.c.b.b	ENSGT00940000156335.a	ENSGT00390000013727.d
Monodontidae	ANCESTRAL SPECIES	23	ENSGT00940000161601	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435.i #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT00390000006503.a.l	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00960000192355	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00500000045333.c.b.b	ENSGT00940000156335.a
Beluga whale	MODERN SPECIES	111	ENSDLEG00000009926	ENSDLEG00000009917	ENSDLEG00000009892 #7	GPR160 (ENSDLEG00000009882)	ENSDLEG00000009698 #7	PRKCI (ENSDLEG00000009652) #8	ENSDLEG00000009641 #9	ENSDLEG00000009628 #9	CLDN11 (ENSDLEG00000009618) #11	SLC7A14 (ENSDLEG00000009599) #14	EIF5A2 (ENSDLEG00000009565) #17	SLC2A2 (ENSDLEG00000009545) #18	TNIK (ENSDLEG00000009325) #19	PLD1 (ENSDLEG00000008664) #20	TMEM212 (ENSDLEG00000008541) #21	FNDC3B (ENSDLEG00000008225) #22	GHSR (ENSDLEG00000008159) #23	TNFSF10 (ENSDLEG00000008145) #24	NCEH1 (ENSDLEG00000015030) #25	ECT2 (ENSDLEG00000014893) #26	SPATA16 (ENSDLEG00000014859) #29	NLGN1 (ENSDLEG00000014852) #31	ENSDLEG00000014835	NAALADL2 (ENSDLEG00000014814) #33	ENSDLEG00000014801	TBL1XR1 (ENSDLEG00000014786) #36	KCNMB2 (ENSDLEG00000014764)	ENSDLEG00000014756	ZMAT3 (ENSDLEG00000014744)	PIK3CA (ENSDLEG00000014721)	ENSDLEG00000014709
Narwhal	MODERN SPECIES	297	SAMD7 (ENSMMNG00015003383)	SEC62 (ENSMMNG00015003354)	GPR160 (ENSMMNG00015003330)	PHC3 (ENSMMNG00015003192) #7	PRKCI (ENSMMNG00015003098) #8	SKIL (ENSMMNG00015003064) #9	CLDN11 (ENSMMNG00015003048) #11	SLC7A14 (ENSMMNG00015003030) #14	ENSMMNG00015003003 #16	EIF5A2 (ENSMMNG00015002984) #17	SLC2A2 (ENSMMNG00015002963) #18	ENSMMNG00015002950	TNIK (ENSMMNG00015002861) #19	PLD1 (ENSMMNG00015002765) #20	TMEM212 (ENSMMNG00015002732) #21	FNDC3B (ENSMMNG00015002705) #22	ENSMMNG00015002696	GHSR (ENSMMNG00015002677) #23	TNFSF10 (ENSMMNG00015002655) #24	NCEH1 (ENSMMNG00015002627) #25	ECT2 (ENSMMNG00015002489) #26	SPATA16 (ENSMMNG00015002430) #29	NLGN1 (ENSMMNG00015002410) #31	ENSMMNG00015002378	NAALADL2 (ENSMMNG00015002350) #33	ENSMMNG00015002332	TBL1XR1 (ENSMMNG00015002265) #36	ENSMMNG00015002145	KCNMB2 (ENSMMNG00015002126)	ENSMMNG00015002111	ZMAT3 (ENSMMNG00015002091)
Vaquita	MODERN SPECIES	15	SAMD7 (ENSPSNG00000002279)	SEC62 (ENSPSNG00000002303)	GPR160 (ENSPSNG00000002329)	PHC3 (ENSPSNG00000002359) #7	PRKCI (ENSPSNG00000002428) #8	ENSPSNG00000002453 #9	CLDN11 (ENSPSNG00000002470) #11	SLC7A14 (ENSPSNG00000002484) #14	ENSPSNG00000002501	ENSPSNG00000002516 #16	EIF5A2 (ENSPSNG00000002538) #17	SLC2A2 (ENSPSNG00000002561) #18	TNIK (ENSPSNG00000002658) #19	PLD1 (ENSPSNG00000002783) #20	TMEM212 (ENSPSNG00000002815) #21	FNDC3B (ENSPSNG00000003283) #22	GHSR (ENSPSNG00000004137) #23	TNFSF10 (ENSPSNG00000004177) #24	NCEH1 (ENSPSNG00000004193) #25	ECT2 (ENSPSNG00000004241) #26	SPATA16 (ENSPSNG00000004352) #29	NLGN1 (ENSPSNG00000004386) #31	ENSPSNG00000004415	NAALADL2 (ENSPSNG00000004440) #33	ENSPSNG00000004485	ENSPSNG00000004503	ENSPSNG00000004516	TBL1XR1 (ENSPSNG00000004528) #36	KCNMB2 (ENSPSNG00000000137)	ENSPSNG00000000161	ZMAT3 (ENSPSNG00000000179)
Dolphin	MODERN SPECIES	2023																FNDC3B (ENSTTRG00000009608) #22
Sperm whale	MODERN SPECIES		SEC62 (ENSPCTG00005001393)	GPR160 (ENSPCTG00005001412)	PHC3 (ENSPCTG00005001443) #7	ENSPCTG00005001517	PRKCI (ENSPCTG00005001542) #8	SKIL (ENSPCTG00005001599) #9	CLDN11 (ENSPCTG00005001618) #11	SLC7A14 (ENSPCTG00005001634) #14	ENSPCTG00005001650	RPL22L1 (ENSPCTG00005001662) #16	EIF5A2 (ENSPCTG00005001682) #17	SLC2A2 (ENSPCTG00005001701) #18	TNIK (ENSPCTG00005001786) #19	PLD1 (ENSPCTG00005001936) #20	TMEM212 (ENSPCTG00005002038) #21	FNDC3B (ENSPCTG00005002082) #22	GHSR (ENSPCTG00005002161) #23	TNFSF10 (ENSPCTG00005002181) #24	NCEH1 (ENSPCTG00005002205) #25	ECT2 (ENSPCTG00005002261) #26	SPATA16 (ENSPCTG00005002355) #29	NLGN1 (ENSPCTG00005002376) #31	NAALADL2 (ENSPCTG00005002399) #33	ENSPCTG00005002425	ENSPCTG00005002436	TBL1XR1 (ENSPCTG00005002457) #36	KCNMB2 (ENSPCTG00005002495)	ENSPCTG00005002512	ZMAT3 (ENSPCTG00005002527)	PIK3CA (ENSPCTG00005002544)	ZNF639 (ENSPCTG00005002565)
Blue whale	MODERN SPECIES	15	LRRC31 (ENSBMSG00010001247)	SAMD7 (ENSBMSG00010001292)	SEC62 (ENSBMSG00010001312)	GPR160 (ENSBMSG00010001330)	PHC3 (ENSBMSG00010001376) #7	PRKCI (ENSBMSG00010001511) #8	ENSBMSG00010001540 #9	CLDN11 (ENSBMSG00010001556) #11	SLC7A14 (ENSBMSG00010001566) #14	RPL22L1 (ENSBMSG00010001581) #16	EIF5A2 (ENSBMSG00010001605) #17	SLC2A2 (ENSBMSG00010001617) #18	TNIK (ENSBMSG00010001841) #19	PLD1 (ENSBMSG00010003385) #20	TMEM212 (ENSBMSG00010003424) #21	FNDC3B (ENSBMSG00010003434) #22	GHSR (ENSBMSG00010003443) #23	TNFSF10 (ENSBMSG00010003448) #24	NCEH1 (ENSBMSG00010003456) #25	ECT2 (ENSBMSG00010003476) #26	SPATA16 (ENSBMSG00010003514) #29	NLGN1 (ENSBMSG00010003524) #31	ENSBMSG00010003532	NAALADL2 (ENSBMSG00010003541) #33	ENSBMSG00010003550	ENSBMSG00010003556	ENSBMSG00010003561	TBL1XR1 (ENSBMSG00010003569) #36	KCNMB2 (ENSBMSG00010003583)	ENSBMSG00010003587	ZMAT3 (ENSBMSG00010003591)
Pecora	ANCESTRAL SPECIES	8	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509.y.a #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Percora_a	ANCESTRAL SPECIES	7	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509.y.a #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Bovidae	ANCESTRAL SPECIES	9	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509.y.a #16	ENSGT00390000003738.a.b #17	ENSGT00960000189143	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Caprinae	ANCESTRAL SPECIES	8	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509.z #16	ENSGT00390000003738.a.b #17	ENSGT00960000189143	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000161884.d	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Goat	MODERN SPECIES		SAMD7 (ENSCHIG00000015287)	SEC62 (ENSCHIG00000020545)	GPR160 (ENSCHIG00000012529)	PHC3 (ENSCHIG00000013975) #7	PRKCI (ENSCHIG00000026557) #8	ENSCHIG00000008899 #9	CLDN11 (ENSCHIG00000011095) #11	SLC7A14 (ENSCHIG00000017415) #14	ENSCHIG00000022855	EIF5A2 (ENSCHIG00000017523) #17	ENSCHIG00000014405	SLC2A2 (ENSCHIG00000008516) #18	TNIK (ENSCHIG00000017624) #19	PLD1 (ENSCHIG00000010044) #20	TMEM212 (ENSCHIG00000019090) #21	FNDC3B (ENSCHIG00000023878) #22	GHSR (ENSCHIG00000009656) #23	TNFSF10 (ENSCHIG00000016856) #24	NCEH1 (ENSCHIG00000024248) #25	ECT2 (ENSCHIG00000025581) #26	ENSCHIG00000013430	SPATA16 (ENSCHIG00000023395) #29	ENSCHIG00000009834	NLGN1 (ENSCHIG00000026919) #31	NAALADL2 (ENSCHIG00000018744) #33	TBL1XR1 (ENSCHIG00000010626) #36	KCNMB2 (ENSCHIG00000020065)	ZMAT3 (ENSCHIG00000025074)	PIK3CA (ENSCHIG00000016154)	KCNMB3 (ENSCHIG00000021624)	ZNF639 (ENSCHIG00000025519)
Rambouillet Sheep	MODERN SPECIES		GPR160 (ENSOARG00020001824)	PHC3 (ENSOARG00020001727) #7	RPL17 (ENSOARG00020001698)	PRKCI (ENSOARG00020001681) #8	SKIL (ENSOARG00020001654) #9	CLDN11 (ENSOARG00020001642) #11	SLC7A14 (ENSOARG00020001626) #14	ENSOARG00020001599 #16	EIF5A2 (ENSOARG00020001566) #17	SLC2A2 (ENSOARG00020001524) #18	TNIK (ENSOARG00020001197) #19	PLD1 (ENSOARG00020001072) #20	TMEM212 (ENSOARG00020001050) #21	GHSR (ENSOARG00020001032) #23	TNFSF10 (ENSOARG00020001008) #24	FNDC3B (ENSOARG00020000887) #22	NCEH1 (ENSOARG00020000787) #25	ECT2 (ENSOARG00020000567) #26	SPATA16 (ENSOARG00020000484) #29	ENSOARG00020000457	NLGN1 (ENSOARG00020000438) #31	NAALADL2 (ENSOARG00020000356) #33	ENSOARG00020000331	TBL1XR1 (ENSOARG00020000203) #36	ENSOARG00020000133	KCNMB2 (ENSOARG00020000078)	ZMAT3 (ENSOARG00020000075)	PIK3CA (ENSOARG00020010030)	ENSOARG00020009952	ZNF639 (ENSOARG00020009893)	MFN1 (ENSOARG00020009679)
Bovinae	ANCESTRAL SPECIES	6	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00960000190743	ENSGT00940000154509.y.a #16	ENSGT00390000003738.a.b #17	ENSGT00960000189143	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
American bison	MODERN SPECIES	2978	GPR160 (ENSBBBG00000001660)	PHC3 (ENSBBBG00000009906) #7	PRKCI (ENSBBBG00000009887) #8	SKIL (ENSBBBG00000009879) #9	CLDN11 (ENSBBBG00000009873) #11	SLC7A14 (ENSBBBG00000009871) #14	ENSBBBG00000001649	ENSBBBG00000009861 #16	EIF5A2 (ENSBBBG00000009855) #17	ENSBBBG00000009851	SLC2A2 (ENSBBBG00000009847) #18	TNIK (ENSBBBG00000009819) #19	PLD1 (ENSBBBG00000009723) #20	TMEM212 (ENSBBBG00000009707) #21	ENSBBBG00000009703	FNDC3B (ENSBBBG00000009700) #22	GHSR (ENSBBBG00000009692) #23	TNFSF10 (ENSBBBG00000009691) #24	NCEH1 (ENSBBBG00000009689) #25	ECT2 (ENSBBBG00000001574) #26
Bos	ANCESTRAL SPECIES	7	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00960000190743	ENSGT00940000154509.y.a #16	ENSGT00390000003738.a.b #17	ENSGT00960000189143	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01100000263481.n.a.a.a.b.a.b.b.b.a.a.a.a	ENSGT01100000263481.n.a.b.a.a.b.b.b.a	ENSGT00990000205077	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b
Bos_b	ANCESTRAL SPECIES	5	ENSGT00390000011943.a.a.a.a.k	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00960000190743	ENSGT00940000154509.y.a #16	ENSGT00390000003738.a.b #17	ENSGT00960000189143	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00950000183087.A.b.b	ENSGT00940000161884.d	ENSGT00940000155789 #31	ENSGT01100000263481.n.a.a.a.b.a.b.b.b.a.a.a.a	ENSGT01100000263481.n.a.b.a.a.b.b.b.a	ENSGT00990000205077	ENSGT01030000234598.a.b #33	ENSGT00860000135711	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a
Cow	MODERN SPECIES		PHC3 (ENSBTAG00000013938) #7	PRKCI (ENSBTAG00000001403) #8	SKIL (ENSBTAG00000004154) #9	CLDN11 (ENSBTAG00000019060) #11	SLC7A14 (ENSBTAG00000016323) #14	ENSBTAG00000052203	RPL22L1 (ENSBTAG00000007394) #16	EIF5A2 (ENSBTAG00000010550) #17	SLC2A2 (ENSBTAG00000005386) #18	ENSBTAG00000050747	TNIK (ENSBTAG00000011742)	TMSB4 (ENSBTAG00000051079)	ENSBTAG00000049814 #19	PLD1 (ENSBTAG00000017490) #20	TMEM212 (ENSBTAG00000006174) #21	FNDC3B (ENSBTAG00000019376) #22	GHSR (ENSBTAG00000010874) #23	TNFSF10 (ENSBTAG00000018994) #24	NCEH1 (ENSBTAG00000020073) #25	ECT2 (ENSBTAG00000023814) #26	SPATA16 (ENSBTAG00000031802) #29	ENSBTAG00000012401	ENSBTAG00000046279	NLGN1 (ENSBTAG00000031891) #31	ENSBTAG00000054712	NAALADL2 (ENSBTAG00000048493) #33	ENSBTAG00000054926	TBL1XR1 (ENSBTAG00000021910) #36	ENSBTAG00000048417	ENSBTAG00000052803	GTPBP6 (ENSBTAG00000054315)
Hybrid Bos Indicus	MODERN SPECIES		ENSBIXG00005014840	GPR160 (ENSBIXG00005014856)	PHC3 (ENSBIXG00005014971) #7	ENSBIXG00005015029	PRKCI (ENSBIXG00005015079) #8	SKIL (ENSBIXG00005002224) #9	CLDN11 (ENSBIXG00005015126) #11	SLC7A14 (ENSBIXG00005015165) #14	ENSBIXG00005015242 #16	EIF5A2 (ENSBIXG00005015286) #17	ENSBIXG00005002252	SLC2A2 (ENSBIXG00005015354) #18	TNIK (ENSBIXG00005002445) #19	PLD1 (ENSBIXG00005015980) #20	TMEM212 (ENSBIXG00005016059) #21	FNDC3B (ENSBIXG00005016325) #22	GHSR (ENSBIXG00005016403) #23	TNFSF10 (ENSBIXG00005016416) #24	NCEH1 (ENSBIXG00005016476) #25	ECT2 (ENSBIXG00005016640) #26	SPATA16 (ENSBIXG00005016707) #29	ENSBIXG00005016731	ENSBIXG00005016763	ENSBIXG00005016780	NLGN1 (ENSBIXG00005016835) #31	ENSBIXG00005007046	ENSBIXG00005016905	ENSBIXG00005016911	NAALADL2 (ENSBIXG00005002757) #33	TBL1XR1 (ENSBIXG00005002780) #36	ENSBIXG00005006866
Bos_a	ANCESTRAL SPECIES	5	ENSGT00390000011943.a.a.a.b.b.h	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00960000190743	ENSGT00940000154509.y.a #16	ENSGT00390000003738.a.b #17	ENSGT00960000189143	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01100000263481.n.a.a.a.b.a.b.b.b.a.a.a.a	ENSGT01100000263481.n.a.b.a.a.b.b.b.a	ENSGT00990000205077	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a
Domestic yak	MODERN SPECIES		SKIL (ENSBGRG00000006204) #9	CLDN11 (ENSBGRG00000006186) #11	SLC7A14 (ENSBGRG00000006126) #14	ENSBGRG00000006113	ENSBGRG00000006105	ENSBGRG00000007513 #16	EIF5A2 (ENSBGRG00000007427) #17	ENSBGRG00000007374	SLC2A2 (ENSBGRG00000007265) #18	ENSBGRG00000007242	TNIK (ENSBGRG00000004855) #19	ENSBGRG00000004737	PLD1 (ENSBGRG00000004430) #20	TMEM212 (ENSBGRG00000004399) #21	ENSBGRG00000004377	FNDC3B (ENSBGRG00000003929) #22	GHSR (ENSBGRG00000003884) #23	TNFSF10 (ENSBGRG00000003840) #24	NCEH1 (ENSBGRG00000003789) #25	ECT2 (ENSBGRG00000003533) #26	ENSBGRG00000003513	SPATA16 (ENSBGRG00000003501) #29	ENSBGRG00000003487	ENSBGRG00000003486	NLGN1 (ENSBGRG00000003457) #31	ENSBGRG00000003453	ENSBGRG00000003433	NAALADL2 (ENSBGRG00000003389) #33	TBL1XR1 (ENSBGRG00000003307) #36	ENSBGRG00000003290	KCNMB2 (ENSBGRG00000003278)
Wild yak	MODERN SPECIES	284																FNDC3B (ENSBMUG00000006072) #22	GHSR (ENSBMUG00000006101) #23	TNFSF10 (ENSBMUG00000006105) #24	NCEH1 (ENSBMUG00000006114) #25	ECT2 (ENSBMUG00000006183) #26	SPATA16 (ENSBMUG00000006380) #29	NLGN1 (ENSBMUG00000006394) #31	ENSBMUG00000006405
Siberian musk deer	MODERN SPECIES	139	LRRC31 (ENSMMSG00000004401)	SEC62 (ENSMMSG00000004383)	ENSMMSG00000004374	GPR160 (ENSMMSG00000004363)	PHC3 (ENSMMSG00000004277) #7	PRKCI (ENSMMSG00000004250) #8	SKIL (ENSMMSG00000004231) #9	CLDN11 (ENSMMSG00000004219) #11	SLC7A14 (ENSMMSG00000004212) #14	ENSMMSG00000004199 #16	EIF5A2 (ENSMMSG00000004181) #17	SLC2A2 (ENSMMSG00000004156) #18	TNIK (ENSMMSG00000004049) #19	PLD1 (ENSMMSG00000003941) #20	TMEM212 (ENSMMSG00000003921) #21	FNDC3B (ENSMMSG00000003904) #22	GHSR (ENSMMSG00000003895) #23	TNFSF10 (ENSMMSG00000003888) #24	ENSMMSG00000003878	NCEH1 (ENSMMSG00000003867) #25	ECT2 (ENSMMSG00000003783) #26	SPATA16 (ENSMMSG00000003744) #29	ENSMMSG00000003725	ENSMMSG00000003711	NLGN1 (ENSMMSG00000003692) #31	ENSMMSG00000003679	NAALADL2 (ENSMMSG00000003624) #33	TBL1XR1 (ENSMMSG00000003575) #36	KCNMB2 (ENSMMSG00000003557)	ENSMMSG00000003544	ZMAT3 (ENSMMSG00000003531)
Yarkand deer	MODERN SPECIES	10	LRRC31 (ENSCHYG00000010866)	SAMD7 (ENSCHYG00000010756)	SEC62 (ENSCHYG00000010630)	GPR160 (ENSCHYG00000010569)	PHC3 (ENSCHYG00000009902) #7	PRKCI (ENSCHYG00000009667) #8	SKIL (ENSCHYG00000009571) #9	CLDN11 (ENSCHYG00000009528) #11	SLC7A14 (ENSCHYG00000009454) #14	ENSCHYG00000009314 #16	EIF5A2 (ENSCHYG00000009195) #17	SLC2A2 (ENSCHYG00000009000) #18	TNIK (ENSCHYG00000006876) #19	PLD1 (ENSCHYG00000006194) #20	TMEM212 (ENSCHYG00000006094) #21	FNDC3B (ENSCHYG00000005907) #22	GHSR (ENSCHYG00000005817) #23	TNFSF10 (ENSCHYG00000005789) #24	NCEH1 (ENSCHYG00000005728) #25	ENSCHYG00000005713	ECT2 (ENSCHYG00000005081) #26	SPATA16 (ENSCHYG00000004961) #29	ENSCHYG00000004463	ENSCHYG00000022159	NLGN1 (ENSCHYG00000022086) #31	NAALADL2 (ENSCHYG00000021681) #33	ENSCHYG00000021620	ENSCHYG00000021600	TBL1XR1 (ENSCHYG00000021350) #36	ENSCHYG00000021293	KCNMB2 (ENSCHYG00000021244)
Camelidae	ANCESTRAL SPECIES		ENSGT00940000161601	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Alpaca	MODERN SPECIES	1941																FNDC3B (ENSVPAG00000005894) #22	GHSR (ENSVPAG00000005896) #23	ENSVPAG00000005897 #24	NCEH1 (ENSVPAG00000005898) #25	ECT2 (ENSVPAG00000005899) #26	SPATA16 (ENSVPAG00000005900) #29	NLGN1 (ENSVPAG00000005901) #31
Arabian camel	DUPLICATION
Arabian camel	MODERN SPECIES		SAMD7 (ENSCDRG00005005229)	SEC62 (ENSCDRG00005005257)	GPR160 (ENSCDRG00005005273)	PHC3 (ENSCDRG00005005298) #7	PRKCI (ENSCDRG00005005504) #8	SKIL (ENSCDRG00005005548) #9	CLDN11 (ENSCDRG00005005584) #11	SLC7A14 (ENSCDRG00005005598) #14	RPL22L1 (ENSCDRG00005005631) #16	EIF5A2 (ENSCDRG00005005686) #17	SLC2A2 (ENSCDRG00005005723) #18	TNIK (ENSCDRG00005005860) #19	PLD1 (ENSCDRG00005008849) #20	TMEM212 (ENSCDRG00005009492) #21	ENSCDRG00005009531 #22	FNDC3B (ENSCDRG00005009638) #22	GHSR (ENSCDRG00005011555) #23	TNFSF10 (ENSCDRG00005011611) #24	NCEH1 (ENSCDRG00005000005) #25	ENSCDRG00005000009	ECT2 (ENSCDRG00005000011) #26	ENSCDRG00005000019	SPATA16 (ENSCDRG00005000021) #29	NLGN1 (ENSCDRG00005000025) #31	ENSCDRG00005000026	NAALADL2 (ENSCDRG00005000032) #33	ENSCDRG00005000048	TBL1XR1 (ENSCDRG00005000072) #36	KCNMB2 (ENSCDRG00005000101)	ENSCDRG00005000141	ZMAT3 (ENSCDRG00005000152)
Arabian camel	MODERN SPECIES		LRRIQ4 (ENSCDRG00005005208)	SAMD7 (ENSCDRG00005005229)	SEC62 (ENSCDRG00005005257)	GPR160 (ENSCDRG00005005273)	PHC3 (ENSCDRG00005005298) #7	PRKCI (ENSCDRG00005005504) #8	SKIL (ENSCDRG00005005548) #9	CLDN11 (ENSCDRG00005005584) #11	SLC7A14 (ENSCDRG00005005598) #14	RPL22L1 (ENSCDRG00005005631) #16	EIF5A2 (ENSCDRG00005005686) #17	SLC2A2 (ENSCDRG00005005723) #18	TNIK (ENSCDRG00005005860) #19	PLD1 (ENSCDRG00005008849) #20	TMEM212 (ENSCDRG00005009492) #21	ENSCDRG00005009531 #22	FNDC3B (ENSCDRG00005009638) #22	GHSR (ENSCDRG00005011555) #23	TNFSF10 (ENSCDRG00005011611) #24	NCEH1 (ENSCDRG00005000005) #25	ENSCDRG00005000009	ECT2 (ENSCDRG00005000011) #26	ENSCDRG00005000019	SPATA16 (ENSCDRG00005000021) #29	NLGN1 (ENSCDRG00005000025) #31	ENSCDRG00005000026	NAALADL2 (ENSCDRG00005000032) #33	ENSCDRG00005000048	TBL1XR1 (ENSCDRG00005000072) #36	KCNMB2 (ENSCDRG00005000101)	ENSCDRG00005000141
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157005 #22
Common shrew	MODERN SPECIES	5788																FNDC3B (ENSSARG00000003215) #22
Hedgehog	MODERN SPECIES	7733																FNDC3B (ENSEEUG00000010816) #22
Atlantogenata	ANCESTRAL SPECIES	19	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Xenarthra	ANCESTRAL SPECIES	1022															ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25
Sloth	MODERN SPECIES	7171																FNDC3B (ENSCHOG00000012163) #22
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	2102													TMEM212 (ENSDNOG00000045572) #21	ENSDNOG00000045973	ENSDNOG00000038934 #22	FNDC3B (ENSDNOG00000015809) #22	GHSR (ENSDNOG00000023928) #23	TNFSF10 (ENSDNOG00000034085) #24	NCEH1 (ENSDNOG00000011292) #25
Armadillo	MODERN SPECIES	2102														TMEM212 (ENSDNOG00000045572) #21	ENSDNOG00000045973	ENSDNOG00000038934 #22	FNDC3B (ENSDNOG00000015809) #22	GHSR (ENSDNOG00000023928) #23	TNFSF10 (ENSDNOG00000034085) #24	NCEH1 (ENSDNOG00000011292) #25
Afrotheria	ANCESTRAL SPECIES	118	ENSGT00940000161601	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335
Afrotheria_a	ANCESTRAL SPECIES	119	ENSGT00940000161601	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335
Elephant	MODERN SPECIES	388	LRRC34 (ENSLAFG00000010596)	LRRIQ4 (ENSLAFG00000014769)	LRRC31 (ENSLAFG00000014773)	SAMD7 (ENSLAFG00000006504)	SEC62 (ENSLAFG00000006508)	PHC3 (ENSLAFG00000013315) #7	PRKCI (ENSLAFG00000004925) #8	SKIL (ENSLAFG00000023277) #9	CLDN11 (ENSLAFG00000011475) #11	SLC7A14 (ENSLAFG00000006924) #14	RPL22L1 (ENSLAFG00000013220) #16	EIF5A2 (ENSLAFG00000013225) #17	SLC2A2 (ENSLAFG00000012114) #18	TNIK (ENSLAFG00000017445) #19	PLD1 (ENSLAFG00000000014) #20	FNDC3B (ENSLAFG00000017259) #22	GHSR (ENSLAFG00000017284) #23	TNFSF10 (ENSLAFG00000014313) #24	ENSLAFG00000026187	NCEH1 (ENSLAFG00000010083) #25	ECT2 (ENSLAFG00000007798) #26	SPATA16 (ENSLAFG00000009211) #29	ENSLAFG00000025798	NLGN1 (ENSLAFG00000010162) #31	TBL1XR1 (ENSLAFG00000021750) #36	KCNMB2 (ENSLAFG00000004923)	ZMAT3 (ENSLAFG00000000897)	PIK3CA (ENSLAFG00000003071)	KCNMB3 (ENSLAFG00000003072)	ZNF639 (ENSLAFG00000001733)
Hyrax	MODERN SPECIES	6731																FNDC3B (ENSPCAG00000004306) #22
Tenrec	MODERN SPECIES	7100																FNDC3B (ENSETEG00000010177) #22
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00950000182965.a.b.b.a.a.a.a.a.a	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00950000182965.a.b.b.a.a.a.a.a.a	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d
Diprotodontia	ANCESTRAL SPECIES	17	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00950000182965.a.b.b.a.a.a.a.a.a	ENSGT00950000182965.a.b.b.a.a.a.a.a.b	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335
Diprotodontia_a	ANCESTRAL SPECIES	19	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00940000158429.d	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00950000182965.a.b.b.a.a.a.a.a.a	ENSGT00950000182965.a.b.b.a.a.a.a.a.b	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335
Common wonbat	MODERN SPECIES	1046	SEC62 (ENSVURG00010013230)	GPR160 (ENSVURG00010013225)	PHC3 (ENSVURG00010013194) #7	PRKCI (ENSVURG00010013171) #8	SKIL (ENSVURG00010013156) #9	CLDN11 (ENSVURG00010013147) #11	SLC7A14 (ENSVURG00010013128) #14	ENSVURG00010013116	RPL22L1 (ENSVURG00010013107) #16	EIF5A2 (ENSVURG00010013099) #17	SLC2A2 (ENSVURG00010013085) #18	TNIK (ENSVURG00010012914) #19	PLD1 (ENSVURG00010012863) #20	ENSVURG00010012856	TMEM212 (ENSVURG00010012848) #21	FNDC3B (ENSVURG00010012819) #22	GHSR (ENSVURG00010012811) #23	TNFSF10 (ENSVURG00010012804) #24	ENSVURG00010012795 #25	ECT2 (ENSVURG00010012760) #26	SPATA16 (ENSVURG00010012732) #29	NLGN1 (ENSVURG00010012715) #31	NAALADL2 (ENSVURG00010012681) #33	ENSVURG00010012660	TBL1XR1 (ENSVURG00010012629) #36	KCNMB2 (ENSVURG00010012605)	PIK3CA (ENSVURG00010012578)	KCNMB3 (ENSVURG00010012570)	ZNF639 (ENSVURG00010012565)	MFN1 (ENSVURG00010012549)	GNB4 (ENSVURG00010012529)
koala	MODERN SPECIES	9	ENSPCIG00000025943	SEC62 (ENSPCIG00000025944)	GPR160 (ENSPCIG00000025946)	PHC3 (ENSPCIG00000025948) #7	PRKCI (ENSPCIG00000025949) #8	SKIL (ENSPCIG00000025951) #9	CLDN11 (ENSPCIG00000000074) #11	SLC7A14 (ENSPCIG00000000081) #14	ENSPCIG00000000151 #16	EIF5A2 (ENSPCIG00000000441) #17	SLC2A2 (ENSPCIG00000000479) #18	TNIK (ENSPCIG00000005702) #19	PLD1 (ENSPCIG00000005485) #20	ENSPCIG00000033713	TMEM212 (ENSPCIG00000005387) #21	FNDC3B (ENSPCIG00000010317) #22	GHSR (ENSPCIG00000010316) #23	TNFSF10 (ENSPCIG00000010315) #24	NCEH1 (ENSPCIG00000010313) #25	ECT2 (ENSPCIG00000010310) #26	SPATA16 (ENSPCIG00000010299) #29	ENSPCIG00000035061	NLGN1 (ENSPCIG00000023665) #31	NAALADL2 (ENSPCIG00000036959) #33	ENSPCIG00000010041	ENSPCIG00000030517	TBL1XR1 (ENSPCIG00000028583) #36	KCNMB2 (ENSPCIG00000006759)	ZMAT3 (ENSPCIG00000034195)	ENSPCIG00000006763	PIK3CA (ENSPCIG00000006767)
Wallaby	MODERN SPECIES	9624																FNDC3B (ENSMEUG00000014298) #22
Tasmanian devil	MODERN SPECIES	2	LRRIQ4 (ENSSHAG00000015940)	LRRC31 (ENSSHAG00000015879)	SEC62 (ENSSHAG00000021206)	GPR160 (ENSSHAG00000015506)	PHC3 (ENSSHAG00000015302) #7	PRKCI (ENSSHAG00000015052) #8	SKIL (ENSSHAG00000014634) #9	CLDN11 (ENSSHAG00000025165) #11	SLC7A14 (ENSSHAG00000014326) #14	RPL22L1 (ENSSHAG00000012876) #16	EIF5A2 (ENSSHAG00000027904) #17	SLC2A2 (ENSSHAG00000012226) #18	TNIK (ENSSHAG00000011118) #19	PLD1 (ENSSHAG00000007384) #20	TMEM212 (ENSSHAG00000024508) #21	FNDC3B (ENSSHAG00000006632) #22	GHSR (ENSSHAG00000023938) #23	ENSSHAG00000031725 #24	NCEH1 (ENSSHAG00000025000) #25	ECT2 (ENSSHAG00000010171) #26	SPATA16 (ENSSHAG00000010931) #29	NLGN1 (ENSSHAG00000016978) #31	NAALADL2 (ENSSHAG00000018074) #33	ENSSHAG00000022530	TBL1XR1 (ENSSHAG00000005700) #36	KCNMB2 (ENSSHAG00000027317)	ZMAT3 (ENSSHAG00000016154)	PIK3CA (ENSSHAG00000016406)	KCNMB3 (ENSSHAG00000016520)	ZNF639 (ENSSHAG00000016769)	MFN1 (ENSSHAG00000016834)
Opossum	MODERN SPECIES	6	ENSMODG00000037522	NBEAL1 (ENSMODG00000016268)	ENSMODG00000047566	CARF (ENSMODG00000016272)	WDR12 (ENSMODG00000016275)	ICA1L (ENSMODG00000016279)	FAM117B (ENSMODG00000016284)	BMPR2 (ENSMODG00000016287)	ENSMODG00000040173	NOP58 (ENSMODG00000016294)	SUMO1 (ENSMODG00000045712)	ENSMODG00000025491	FZD7 (ENSMODG00000016310)	CDK15 (ENSMODG00000016326)	ALS2 (ENSMODG00000016329)	FNDC3B (ENSMODG00000021323) #22	GHSR (ENSMODG00000021322) #23	TNFSF10 (ENSMODG00000041585) #24	NCEH1 (ENSMODG00000051563) #25	ECT2 (ENSMODG00000021319) #26	SPATA16 (ENSMODG00000021318) #29	NLGN1 (ENSMODG00000021315) #31	NAALADL2 (ENSMODG00000021314) #33	ENSMODG00000024795	ENSMODG00000051427	ENSMODG00000021313	ENSMODG00000027370	TBL1XR1 (ENSMODG00000021312) #36	KCNMB2 (ENSMODG00000021309)	ZMAT3 (ENSMODG00000021308)	PIK3CA (ENSMODG00000021305)
Platypus	MODERN SPECIES		LRRC31 (ENSOANG00000003718)	ENSOANG00000005421	SEC62 (ENSOANG00000007659)	GPR160 (ENSOANG00000004101)	PHC3 (ENSOANG00000043875) #7	PRKCI (ENSOANG00000021356) #8	SKIL (ENSOANG00000000724) #9	CLDN11 (ENSOANG00000050151) #11	SLC7A14 (ENSOANG00000008030) #14	RPL22L1 (ENSOANG00000003938) #16	EIF5A2 (ENSOANG00000047260) #17	SLC2A2 (ENSOANG00000001520) #18	TNIK (ENSOANG00000012684) #19	PLD1 (ENSOANG00000037105) #20	TMEM212 (ENSOANG00000050579) #21	FNDC3B (ENSOANG00000001087) #22	GHSR (ENSOANG00000045758) #23	TNFSF10 (ENSOANG00000009315) #24	NCEH1 (ENSOANG00000039720) #25	ECT2 (ENSOANG00000013671) #26	SPATA16 (ENSOANG00000022205) #29	NLGN1 (ENSOANG00000050589) #31	NAALADL2 (ENSOANG00000049145) #33	ENSOANG00000049897	TBL1XR1 (ENSOANG00000009492) #36	ENSOANG00000001673	KCNMB2 (ENSOANG00000040015)	ZMAT3 (ENSOANG00000009901)	PIK3CA (ENSOANG00000013922)	KCNMB3 (ENSOANG00000013923)	ZNF639 (ENSOANG00000012679)
Sauria	ANCESTRAL SPECIES	9	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000153313.C.a	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT01030000235369	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Lepidosauria	ANCESTRAL SPECIES	12	ENSGT00390000015520	ENSGT00940000153313.C.a.g	ENSGT00940000154964 #7	ENSGT00940000153313.C.a.h	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT01030000235369	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT01030000235369	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT01030000235369	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Elapidae	ANCESTRAL SPECIES	4	ENSGT00390000015520	ENSGT00940000153313.C.a.g.a	ENSGT00940000153313.C.a.h	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00390000006293.td	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT01030000235369	ENSGT00940000156335	ENSGT00390000013727.d
Elapidae_a	ANCESTRAL SPECIES		ENSGT00390000015520	ENSGT00940000153313.C.a.g.a	ENSGT00940000153313.C.a.h	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b.u #36	ENSGT00950000183039.B.b.a	ENSGT00390000006293.td	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT01030000235369	ENSGT00940000156335	ENSGT00390000013727.d
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00390000015520	ENSGT00940000153313.C.a.g.a	ENSGT00940000153313.C.a.h	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b.u #36	ENSGT00950000183039.B.b.a	ENSGT00390000006293.td	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT01030000235369	ENSGT00940000156335	ENSGT00390000013727.d
Eastern brown snake	MODERN SPECIES	29	ENSPTXG00000013361	ENSPTXG00000013359	PHC3 (ENSPTXG00000013356) #7	PRKCI (ENSPTXG00000013353) #8	SKIL (ENSPTXG00000013351) #9	CLDN11 (ENSPTXG00000013349) #11	SLC7A14 (ENSPTXG00000013348) #14	RPL22L1 (ENSPTXG00000013347) #16	EIF5A2 (ENSPTXG00000013346) #17	SLC2A2 (ENSPTXG00000013345) #18	ENSPTXG00000013344	TNIK (ENSPTXG00000013343) #19	PLD1 (ENSPTXG00000013341) #20	TMEM212 (ENSPTXG00000013340) #21	ENSPTXG00000013339	FNDC3B (ENSPTXG00000013338) #22	GHSR (ENSPTXG00000013337) #23	TNFSF10 (ENSPTXG00000013335) #24	NCEH1 (ENSPTXG00000013334) #25	ENSPTXG00000013332 #26	ENSPTXG00000013331 #26	SPATA16 (ENSPTXG00000013329) #29	NLGN1 (ENSPTXG00000013325) #31	NAALADL2 (ENSPTXG00000013319) #33	TBL1XR1 (ENSPTXG00000013314) #36	KCNMB2 (ENSPTXG00000017809)	ZMAT3 (ENSPTXG00000017808)	PIK3CA (ENSPTXG00000017806)	ZNF639 (ENSPTXG00000017805)	MFN1 (ENSPTXG00000017761)	GNB4 (ENSPTXG00000017756)
Mainland tiger snake	MODERN SPECIES		GPR160 (ENSNSUG00000002563)	PHC3 (ENSNSUG00000002564) #7	ENSNSUG00000002570	ENSNSUG00000002573	PRKCI (ENSNSUG00000002575) #8	SKIL (ENSNSUG00000002577) #9	CLDN11 (ENSNSUG00000002579) #11	SLC7A14 (ENSNSUG00000002581) #14	RPL22L1 (ENSNSUG00000002600) #16	EIF5A2 (ENSNSUG00000002601) #17	SLC2A2 (ENSNSUG00000002602) #18	ENSNSUG00000002603	ENSNSUG00000002609 #19	PLD1 (ENSNSUG00000002615) #20	TMEM212 (ENSNSUG00000002795) #21	FNDC3B (ENSNSUG00000002814) #22	ENSNSUG00000003787	GHSR (ENSNSUG00000003794) #23	TNFSF10 (ENSNSUG00000003810) #24	NCEH1 (ENSNSUG00000003814) #25	ENSNSUG00000003817 #26	ENSNSUG00000003831 #26	SPATA16 (ENSNSUG00000003835) #29	ENSNSUG00000003858 #31	ENSNSUG00000003867	NLGN1 (ENSNSUG00000003879) #31	NAALADL2 (ENSNSUG00000003894) #33	TBL1XR1 (ENSNSUG00000003899) #36	KCNMB2 (ENSNSUG00000003916)	ENSNSUG00000003919	ZMAT3 (ENSNSUG00000003923)
Blue-lipped sea krait	MODERN SPECIES	268																FNDC3B (ENSLLTG00000018147) #22	ENSLLTG00000018149	GHSR (ENSLLTG00000018151) #23	TNFSF10 (ENSLLTG00000018153) #24
Indian cobra	MODERN SPECIES	3	PHC3 (ENSNNAG00000011208) #7	ENSNNAG00000011458	ENSNNAG00000011488	PRKCI (ENSNNAG00000011515) #8	SKIL (ENSNNAG00000011649) #9	CLDN11 (ENSNNAG00000011665) #11	SLC7A14 (ENSNNAG00000011697) #14	RPL22L1 (ENSNNAG00000011816) #16	EIF5A2 (ENSNNAG00000011836) #17	SLC2A2 (ENSNNAG00000011868) #18	TNIK (ENSNNAG00000012451) #19	ENSNNAG00000016239	PLD1 (ENSNNAG00000016268) #20	ENSNNAG00000016338	TMEM212 (ENSNNAG00000016341) #21	FNDC3B (ENSNNAG00000016356) #22	GHSR (ENSNNAG00000016421) #23	TNFSF10 (ENSNNAG00000016427) #24	NCEH1 (ENSNNAG00000016440) #25	ECT2 (ENSNNAG00000016490) #26	SPATA16 (ENSNNAG00000016632) #29	NLGN1 (ENSNNAG00000016645) #31	NAALADL2 (ENSNNAG00000016653) #33	TBL1XR1 (ENSNNAG00000016658) #36	KCNMB2 (ENSNNAG00000016680)	ENSNNAG00000007595	ENSNNAG00000007631	ZMAT3 (ENSNNAG00000007645)	PIK3CA (ENSNNAG00000007680)	ZNF639 (ENSNNAG00000007836)	MFN1 (ENSNNAG00000007861)
Lizard	MODERN SPECIES	2	PRKCI (ENSACAG00000015906) #8	SKIL (ENSACAG00000016018) #9	CLDN11 (ENSACAG00000016046) #11	SLC7A14 (ENSACAG00000016056) #14	ENSACAG00000036497	RPL22L1 (ENSACAG00000016073) #16	EIF5A2 (ENSACAG00000016084) #17	SLC2A2 (ENSACAG00000016103) #18	TNIK (ENSACAG00000016153) #19	ENSACAG00000041304	ENSACAG00000034839	PLD1 (ENSACAG00000016232) #20	TMEM212 (ENSACAG00000029545) #21	ENSACAG00000035422	ENSACAG00000034587	FNDC3B (ENSACAG00000016311) #22	GHSR (ENSACAG00000016405) #23	TNFSF10 (ENSACAG00000016411) #24	ENSACAG00000038881	NCEH1 (ENSACAG00000016420) #25	ENSACAG00000044039	ECT2 (ENSACAG00000016429) #26	ENSACAG00000041861	ENSACAG00000040927	SPATA16 (ENSACAG00000016524) #29	ENSACAG00000039420	ENSACAG00000034608	ENSACAG00000038799	ENSACAG00000035896	ENSACAG00000037640	ENSACAG00000039077
Laterata	ANCESTRAL SPECIES		ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E.j #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT01030000235369	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Argentine black and white tegu	MODERN SPECIES	21	ENSSMRG00000023659	GPR160 (ENSSMRG00000023658)	ENSSMRG00000023656	ENSSMRG00000023655	PHC3 (ENSSMRG00000023654) #7	ENSSMRG00000023653 #8	SKIL (ENSSMRG00000023652) #9	CLDN11 (ENSSMRG00000023651) #11	SLC7A14 (ENSSMRG00000023650) #14	RPL22L1 (ENSSMRG00000023649) #16	EIF5A2 (ENSSMRG00000023648) #17	SLC2A2 (ENSSMRG00000023647) #18	TNIK (ENSSMRG00000023646) #19	PLD1 (ENSSMRG00000023645) #20	TMEM212 (ENSSMRG00000023644) #21	FNDC3B (ENSSMRG00000023642) #22	GHSR (ENSSMRG00000023641) #23	TNFSF10 (ENSSMRG00000023640) #24	NCEH1 (ENSSMRG00000023639) #25	ECT2 (ENSSMRG00000023637) #26	SPATA16 (ENSSMRG00000023636) #29	NLGN1 (ENSSMRG00000023635) #31	NAALADL2 (ENSSMRG00000023630) #33	TBL1XR1 (ENSSMRG00000023626) #36	KCNMB2 (ENSSMRG00000023624)	ZMAT3 (ENSSMRG00000023623)	PIK3CA (ENSSMRG00000023622)	ENSSMRG00000023621	ZNF639 (ENSSMRG00000023620)	MFN1 (ENSSMRG00000023619)	ENSSMRG00000023618
Common wall lizard	MODERN SPECIES	13	PHC3 (ENSPMRG00000007618) #7	ENSPMRG00000007696	ENSPMRG00000007699	ENSPMRG00000007701	PRKCI (ENSPMRG00000007705) #8	SKIL (ENSPMRG00000007714) #9	CLDN11 (ENSPMRG00000007719) #11	SLC7A14 (ENSPMRG00000007724) #14	RPL22L1 (ENSPMRG00000007730) #16	EIF5A2 (ENSPMRG00000007740) #17	SLC2A2 (ENSPMRG00000007748) #18	TNIK (ENSPMRG00000007931) #19	PLD1 (ENSPMRG00000009383) #20	ENSPMRG00000009393	TMEM212 (ENSPMRG00000009396) #21	FNDC3B (ENSPMRG00000009401) #22	ENSPMRG00000009413	GHSR (ENSPMRG00000009415) #23	TNFSF10 (ENSPMRG00000009429) #24	NCEH1 (ENSPMRG00000009443) #25	ENSPMRG00000009447	ECT2 (ENSPMRG00000009462) #26	SPATA16 (ENSPMRG00000009535) #29	ENSPMRG00000009548	NLGN1 (ENSPMRG00000002947) #31	NAALADL2 (ENSPMRG00000002959) #33	ENSPMRG00000002988	ENSPMRG00000002994	ENSPMRG00000003002	ENSPMRG00000003008	ENSPMRG00000003019
tuatara	MODERN SPECIES	1839	GPR160 (ENSSPUG00000014270)	ENSSPUG00000014255 #7	ENSSPUG00000014228 #7	PRKCI (ENSSPUG00000014208) #8	SKIL (ENSSPUG00000014195) #9	CLDN11 (ENSSPUG00000014185) #11	SLC7A14 (ENSSPUG00000014139) #14	RPL22L1 (ENSSPUG00000014124) #16	EIF5A2 (ENSSPUG00000014120) #17	SLC2A2 (ENSSPUG00000014109) #18	ENSSPUG00000014096	ENSSPUG00000014074	TNIK (ENSSPUG00000013988) #19	PLD1 (ENSSPUG00000013958) #20	TMEM212 (ENSSPUG00000013948) #21	FNDC3B (ENSSPUG00000013897) #22	GHSR (ENSSPUG00000013880) #23	TNFSF10 (ENSSPUG00000013868) #24	NCEH1 (ENSSPUG00000013861) #25	ECT2 (ENSSPUG00000013577) #26	SPATA16 (ENSSPUG00000013504) #29	ENSSPUG00000013495	NLGN1 (ENSSPUG00000013488) #31
Archelosauria	ANCESTRAL SPECIES	11	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000153313.C.a	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT01030000235369.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Archosauria	ANCESTRAL SPECIES	10	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153313.C.a	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a	ENSGT00940000156305
Aves	ANCESTRAL SPECIES	13	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a	ENSGT00940000156305
Neognathae	ANCESTRAL SPECIES	9	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00960000189666	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a	ENSGT00940000156305
Galloanserae	ANCESTRAL SPECIES	16	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00960000189666	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a	ENSGT00940000156305
Anatidae	ANCESTRAL SPECIES	31	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00960000189666	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a	ENSGT00940000156305
Pink-footed goose	MODERN SPECIES	72	SEC62 (ENSABRG00000010768)	GPR160 (ENSABRG00000010766)	PHC3 (ENSABRG00000010727) #7	PRKCI (ENSABRG00000010707) #8	SKIL (ENSABRG00000010699) #9	CLDN11 (ENSABRG00000010692) #11	SLC7A14 (ENSABRG00000010685) #14	RPL22L1 (ENSABRG00000010670) #16	EIF5A2 (ENSABRG00000010662) #17	ENSABRG00000010660	SLC2A2 (ENSABRG00000010641) #18	ENSABRG00000010633	TNIK (ENSABRG00000002344) #19	PLD1 (ENSABRG00000001362) #20	TMEM212 (ENSABRG00000001341) #21	FNDC3B (ENSABRG00000001285) #22	GHSR (ENSABRG00000001233) #23	TNFSF10 (ENSABRG00000001164) #24	NCEH1 (ENSABRG00000001148) #25	ECT2 (ENSABRG00000001001) #26	SPATA16 (ENSABRG00000000786) #29	NLGN1 (ENSABRG00000022582) #31	NAALADL2 (ENSABRG00000022575) #33	TBL1XR1 (ENSABRG00000022555) #36	KCNMB2 (ENSABRG00000022545)	ZMAT3 (ENSABRG00000022537)	PIK3CA (ENSABRG00000022535)	ZNF639 (ENSABRG00000022534)	MFN1 (ENSABRG00000022532)	GNB4 (ENSABRG00000022531)	ACTL6A (ENSABRG00000022528)
Duck	MODERN SPECIES	27	SEC62 (ENSAPLG00000008149)	GPR160 (ENSAPLG00000011683)	PHC3 (ENSAPLG00000008376) #7	PRKCI (ENSAPLG00000008398) #8	SKIL (ENSAPLG00000009027) #9	CLDN11 (ENSAPLG00000011692) #11	SLC7A14 (ENSAPLG00000009288) #14	RPL22L1 (ENSAPLG00000009626) #16	EIF5A2 (ENSAPLG00000025753) #17	SLC2A2 (ENSAPLG00000010156) #18	ENSAPLG00000019003	ENSAPLG00000010480	ENSAPLG00000026428 #19	PLD1 (ENSAPLG00000012211) #20	ENSAPLG00000027837	FNDC3B (ENSAPLG00000012065) #22	GHSR (ENSAPLG00000012064) #23	TNFSF10 (ENSAPLG00000022295) #24	NCEH1 (ENSAPLG00000011627) #25	ECT2 (ENSAPLG00000010339) #26	SPATA16 (ENSAPLG00000010186) #29	NLGN1 (ENSAPLG00000010082) #31	NAALADL2 (ENSAPLG00000010077) #33	TBL1XR1 (ENSAPLG00000013445) #36	KCNMB2 (ENSAPLG00000020595)	ZMAT3 (ENSAPLG00000013292)	PIK3CA (ENSAPLG00000012924)	ZNF639 (ENSAPLG00000012914)	MFN1 (ENSAPLG00000012500)	GNB4 (ENSAPLG00000012235)	ACTL6A (ENSAPLG00000011809)
Phasianidae	ANCESTRAL SPECIES	9	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964.h.a #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00960000189666	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a	ENSGT00940000156305
Phasianidae_b	ANCESTRAL SPECIES	12	ENSGT00940000160075	ENSGT00730000111293	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964.h.a #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00960000189666	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a	ENSGT00940000156305
Chicken	MODERN SPECIES	38	SAMD7 (ENSGALG00010016821)	LRRC31 (ENSGALG00010016812)	SEC62 (ENSGALG00010016797)	GPR160 (ENSGALG00010016761)	PHC3 (ENSGALG00010016733) #7	PRKCI (ENSGALG00010016692) #8	SKIL (ENSGALG00010016675) #9	CLDN11 (ENSGALG00010017612) #11	SLC7A14 (ENSGALG00010017602) #14	RPL22L1 (ENSGALG00010014031) #16	EIF5A2 (ENSGALG00010014010) #17	SLC2A2 (ENSGALG00010013965) #18	ENSGALG00010013947	TNIK (ENSGALG00010013911) #19	PLD1 (ENSGALG00010014093) #20	FNDC3B (ENSGALG00010018579) #22	GHSR (ENSGALG00010018549) #23	TNFSF10 (ENSGALG00010018540) #24	NCEH1 (ENSGALG00010018534) #25	ECT2 (ENSGALG00010018517) #26	SPATA16 (ENSGALG00010018507) #29	NLGN1 (ENSGALG00010018484) #31	NAALADL2 (ENSGALG00010018465) #33	TBL1XR1 (ENSGALG00010018396) #36	KCNMB2 (ENSGALG00010018349)	ZMAT3 (ENSGALG00010018317)	PIK3CA (ENSGALG00010018296)	ZNF639 (ENSGALG00010018275)	MFN1 (ENSGALG00010018255)	GNB4 (ENSGALG00010018185)	ACTL6A (ENSGALG00010018172)
Turkey	MODERN SPECIES	2	ENSMGAG00000010276	SAMD7 (ENSMGAG00000010267)	LRRC31 (ENSMGAG00000010272)	SEC62 (ENSMGAG00000010248)	GPR160 (ENSMGAG00000016053)	ENSMGAG00000010235 #7	PRKCI (ENSMGAG00000010216) #8	SKIL (ENSMGAG00000010204) #9	CLDN11 (ENSMGAG00000010202) #11	SLC7A14 (ENSMGAG00000010187) #14	RPL22L1 (ENSMGAG00000010186) #16	EIF5A2 (ENSMGAG00000020202) #17	SLC2A2 (ENSMGAG00000010184) #18	TNIK (ENSMGAG00000010136) #19	PLD1 (ENSMGAG00000010081) #20	FNDC3B (ENSMGAG00000010040) #22	ENSMGAG00000019728	ENSMGAG00000001176	ACAA2 (ENSMGAG00000001246)	LIPG (ENSMGAG00000001317)	C18orf32 (ENSMGAG00000001347)	ENSMGAG00000021574	GHSR (ENSMGAG00000010038) #23	TNFSF10 (ENSMGAG00000010032) #24	NCEH1 (ENSMGAG00000010017) #25	ECT2 (ENSMGAG00000009941) #26	SPATA16 (ENSMGAG00000009930) #29	NLGN1 (ENSMGAG00000009919) #31	NAALADL2 (ENSMGAG00000009912) #33	TBL1XR1 (ENSMGAG00000009892) #36	ENSMGAG00000021926
Japanese quail	MODERN SPECIES	27	LRRC31 (ENSCJPG00005017911)	SAMD7 (ENSCJPG00005017910)	SEC62 (ENSCJPG00005017909)	GPR160 (ENSCJPG00005017908)	PHC3 (ENSCJPG00005017907) #7	PRKCI (ENSCJPG00005017906) #8	SKIL (ENSCJPG00005017905) #9	CLDN11 (ENSCJPG00005017904) #11	SLC7A14 (ENSCJPG00005017902) #14	RPL22L1 (ENSCJPG00005017901) #16	EIF5A2 (ENSCJPG00005017900) #17	SLC2A2 (ENSCJPG00005017899) #18	ENSCJPG00005017898	TNIK (ENSCJPG00005014297) #19	PLD1 (ENSCJPG00005014277) #20	FNDC3B (ENSCJPG00005014275) #22	GHS-R (ENSCJPG00005014274) #23	TNFSF10 (ENSCJPG00005014273) #24	NCEH1 (ENSCJPG00005014272) #25	ECT2 (ENSCJPG00005014271) #26	SPATA16 (ENSCJPG00005014270) #29	NLGN1 (ENSCJPG00005014267) #31	NAALADL2 (ENSCJPG00005014265) #33	TBL1XR1 (ENSCJPG00005014262) #36	KCNMB2 (ENSCJPG00005014256)	ZMAT3 (ENSCJPG00005014255)	PIK3CA (ENSCJPG00005014254)	ZNF639 (ENSCJPG00005014253)	MFN1 (ENSCJPG00005014252)	GNB4 (ENSCJPG00005014251)	ACTL6A (ENSCJPG00005014250)
Neognathae_b	ANCESTRAL SPECIES	11	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00960000189666	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a	ENSGT00940000156305
Passeriformes	ANCESTRAL SPECIES	9	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00960000189666	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT01010000228465	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a	ENSGT00940000156305	ENSGT00390000002837
Great tit	MODERN SPECIES	29	SAMD7 (ENSPMJG00000004851)	LRRC31 (ENSPMJG00000004849)	SEC62 (ENSPMJG00000004846)	GPR160 (ENSPMJG00000004845)	PHC3 (ENSPMJG00000004823) #7	PRKCI (ENSPMJG00000004800) #8	SKIL (ENSPMJG00000004794) #9	CLDN11 (ENSPMJG00000004790) #11	SLC7A14 (ENSPMJG00000004785) #14	RPL22L1 (ENSPMJG00000004755) #16	EIF5A2 (ENSPMJG00000004754) #17	SLC2A2 (ENSPMJG00000004751) #18	TNIK (ENSPMJG00000004723) #19	PLD1 (ENSPMJG00000004681) #20	ENSPMJG00000004658	FNDC3B (ENSPMJG00000003059) #22	GHSR (ENSPMJG00000003056) #23	TNFSF10 (ENSPMJG00000003047) #24	NCEH1 (ENSPMJG00000003040) #25	ECT2 (ENSPMJG00000003020) #26	NLGN1 (ENSPMJG00000002987) #31	NAALADL2 (ENSPMJG00000002940) #33	TBL1XR1 (ENSPMJG00000002841) #36	KCNMB2 (ENSPMJG00000002756)	ZMAT3 (ENSPMJG00000002709)	PIK3CA (ENSPMJG00000002701)	ZNF639 (ENSPMJG00000002695)	MFN1 (ENSPMJG00000002684)	GNB4 (ENSPMJG00000002659)	ACTL6A (ENSPMJG00000002638)	MRPL47 (ENSPMJG00000002630)
Passeriformes_d	ANCESTRAL SPECIES	10	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00960000189666	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT01010000228465	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a	ENSGT00940000156305	ENSGT00390000002837
Passeriformes_g	ANCESTRAL SPECIES	11	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00960000189666	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT01010000228465	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a	ENSGT00940000156305	ENSGT00390000002837
Passeroidea	ANCESTRAL SPECIES	13	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00960000189666	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT01010000228465	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a	ENSGT00940000156305	ENSGT00390000002837
Common canary	MODERN SPECIES	10	MYNN (ENSSCAG00000009949)	LRRC34 (ENSSCAG00000009984)	SAMD7 (ENSSCAG00000009988)	SEC62 (ENSSCAG00000009994)	GPR160 (ENSSCAG00000010002)	PHC3 (ENSSCAG00000010008) #7	PRKCI (ENSSCAG00000010021) #8	SKIL (ENSSCAG00000010028) #9	CLDN11 (ENSSCAG00000010031) #11	SLC7A14 (ENSSCAG00000010035) #14	RPL22L1 (ENSSCAG00000010041) #16	EIF5A2 (ENSSCAG00000010045) #17	SLC2A2 (ENSSCAG00000010050) #18	TNIK (ENSSCAG00000010287) #19	PLD1 (ENSSCAG00000012001) #20	FNDC3B (ENSSCAG00000012019) #22	GHSR (ENSSCAG00000012030) #23	TNFSF10 (ENSSCAG00000012032) #24	NCEH1 (ENSSCAG00000012047) #25	ECT2 (ENSSCAG00000012156) #26	NLGN1 (ENSSCAG00000012186) #31	NAALADL2 (ENSSCAG00000012244) #33	TBL1XR1 (ENSSCAG00000012275) #36	KCNMB2 (ENSSCAG00000012297)	ZMAT3 (ENSSCAG00000012302)	PIK3CA (ENSSCAG00000012311)	ZNF639 (ENSSCAG00000012318)	MFN1 (ENSSCAG00000012323)	GNB4 (ENSSCAG00000012330)	ACTL6A (ENSSCAG00000012338)	MRPL47 (ENSSCAG00000012343)
Zebra finch	MODERN SPECIES	31	LRRC34 (ENSTGUG00000010997)	LRRC31 (ENSTGUG00000010993)	SAMD7 (ENSTGUG00000010990)	SEC62 (ENSTGUG00000010978)	PHC3 (ENSTGUG00000026531) #7	PRKCI (ENSTGUG00000010959) #8	SKIL (ENSTGUG00000010953) #9	SLC7A14 (ENSTGUG00000010946) #14	RPL22L1 (ENSTGUG00000010942) #16	EIF5A2 (ENSTGUG00000028575) #17	SLC2A2 (ENSTGUG00000010920) #18	ENSTGUG00000025095	TNIK (ENSTGUG00000010875) #19	PLD1 (ENSTGUG00000010857) #20	ENSTGUG00000018991	FNDC3B (ENSTGUG00000010824) #22	GHSR (ENSTGUG00000010823) #23	TNFSF10 (ENSTGUG00000010819) #24	NCEH1 (ENSTGUG00000025400) #25	ECT2 (ENSTGUG00000010794) #26	NLGN1 (ENSTGUG00000021670) #31	NAALADL2 (ENSTGUG00000010781) #33	TBL1XR1 (ENSTGUG00000010773) #36	KCNMB2 (ENSTGUG00000026184)	ZMAT3 (ENSTGUG00000027964)	PIK3CA (ENSTGUG00000010736)	ZNF639 (ENSTGUG00000027191)	MFN1 (ENSTGUG00000010693)	GNB4 (ENSTGUG00000021021)	ACTL6A (ENSTGUG00000010657)	MRPL47 (ENSTGUG00000010649)
Medium ground finch	MODERN SPECIES	12	SAMD7 (ENSGFOG00000012221)	SEC62 (ENSGFOG00000012215)	GPR160 (ENSGFOG00000012211)	ENSGFOG00000012206 #7	ENSGFOG00000012202 #7	PRKCI (ENSGFOG00000012191) #8	SKIL (ENSGFOG00000012186) #9	CLDN11 (ENSGFOG00000012182) #11	SLC7A14 (ENSGFOG00000012176) #14	RPL22L1 (ENSGFOG00000012171) #16	EIF5A2 (ENSGFOG00000012165) #17	SLC2A2 (ENSGFOG00000012156) #18	ENSGFOG00000012152	TNIK (ENSGFOG00000011417) #19	PLD1 (ENSGFOG00000008326) #20	FNDC3B (ENSGFOG00000008069) #22	GHSR (ENSGFOG00000008037) #23	TNFSF10 (ENSGFOG00000008030) #24	NCEH1 (ENSGFOG00000007873) #25	ECT2 (ENSGFOG00000007813) #26	NLGN1 (ENSGFOG00000007784) #31	NAALADL2 (ENSGFOG00000007762) #33	TBL1XR1 (ENSGFOG00000007746) #36	KCNMB2 (ENSGFOG00000007709)	ZMAT3 (ENSGFOG00000007697)	PIK3CA (ENSGFOG00000007668)	ZNF639 (ENSGFOG00000007659)	MFN1 (ENSGFOG00000007632)	GNB4 (ENSGFOG00000007624)	ACTL6A (ENSGFOG00000007543)	MRPL47 (ENSGFOG00000007503)
Flycatcher	MODERN SPECIES	28	MYNN (ENSFALG00000008628)	LRRC34 (ENSFALG00000008623)	LRRC31 (ENSFALG00000008620)	SAMD7 (ENSFALG00000008616)	SEC62 (ENSFALG00000008615)	GPR160 (ENSFALG00000014389)	PHC3 (ENSFALG00000008610) #7	PRKCI (ENSFALG00000008601) #8	SKIL (ENSFALG00000008592) #9	CLDN11 (ENSFALG00000025881) #11	SLC7A14 (ENSFALG00000008583) #14	EIF5A2 (ENSFALG00000008571) #17	SLC2A2 (ENSFALG00000008548) #18	TNIK (ENSFALG00000008495) #19	PLD1 (ENSFALG00000008477) #20	FNDC3B (ENSFALG00000008467) #22	GHSR (ENSFALG00000008461) #23	TNFSF10 (ENSFALG00000026290) #24	NCEH1 (ENSFALG00000008448) #25	ECT2 (ENSFALG00000008443) #26	NLGN1 (ENSFALG00000008434) #31	NAALADL2 (ENSFALG00000008425) #33	TBL1XR1 (ENSFALG00000008416) #36	KCNMB2 (ENSFALG00000008411)	ZMAT3 (ENSFALG00000008403)	PIK3CA (ENSFALG00000008395)	ZNF639 (ENSFALG00000027836)	MFN1 (ENSFALG00000008386)	GNB4 (ENSFALG00000008376)	ACTL6A (ENSFALG00000008369)	MRPL47 (ENSFALG00000008365)
Neognathae_c	ANCESTRAL SPECIES	13	ENSGT00940000156456	ENSGT00730000111293	ENSGT00940000160075	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a	ENSGT00940000156305
Kakapo	MODERN SPECIES	25	LRRC34 (ENSSHBG00005016780)	LRRC31 (ENSSHBG00005016794)	SAMD7 (ENSSHBG00005016805)	SEC62 (ENSSHBG00005016809)	GPR160 (ENSSHBG00005016814)	PHC3 (ENSSHBG00005016817) #7	PRKCI (ENSSHBG00005016828) #8	SKIL (ENSSHBG00005016836) #9	CLDN11 (ENSSHBG00005016841) #11	SLC7A14 (ENSSHBG00005016849) #14	RPL22L1 (ENSSHBG00005016856) #16	EIF5A2 (ENSSHBG00005016863) #17	SLC2A2 (ENSSHBG00005016871) #18	TNIK (ENSSHBG00005016893) #19	PLD1 (ENSSHBG00005016963) #20	FNDC3B (ENSSHBG00005017778) #22	GHSR (ENSSHBG00005017789) #23	TNFSF10 (ENSSHBG00005017794) #24	NCEH1 (ENSSHBG00005017804) #25	ENSSHBG00005017809 #26	ENSSHBG00005017821 #26	SPATA16 (ENSSHBG00005017829) #29	NLGN1 (ENSSHBG00005017842) #31	NAALADL2 (ENSSHBG00005017848) #33	TBL1XR1 (ENSSHBG00005017856) #36	KCNMB2 (ENSSHBG00005017869)	ZMAT3 (ENSSHBG00005017878)	PIK3CA (ENSSHBG00005000694)	ZNF639 (ENSSHBG00005000719)	MFN1 (ENSSHBG00005010431)	GNB4 (ENSSHBG00005010477)
Golden eagle	MODERN SPECIES	1	MYNN (ENSACCG00020003071)	LRRC34 (ENSACCG00020003101)	LRRC31 (ENSACCG00020003124)	SAMD7 (ENSACCG00020003145)	SEC62 (ENSACCG00020003160)	PHC3 (ENSACCG00020003201) #7	PRKCI (ENSACCG00020003245) #8	SKIL (ENSACCG00020003296) #9	CLDN11 (ENSACCG00020003314) #11	SLC7A14 (ENSACCG00020003323) #14	RPL22L1 (ENSACCG00020003347) #16	EIF5A2 (ENSACCG00020003373) #17	SLC2A2 (ENSACCG00020003447) #18	TNIK (ENSACCG00020003590) #19	PLD1 (ENSACCG00020003751) #20	FNDC3B (ENSACCG00020004229) #22	GHSR (ENSACCG00020004449) #23	TNFSF10 (ENSACCG00020004457) #24	NCEH1 (ENSACCG00020004468) #25	ENSACCG00020004485 #26	ENSACCG00020004492 #26	SPATA16 (ENSACCG00020004502) #29	NLGN1 (ENSACCG00020004515) #31	NAALADL2 (ENSACCG00020004541) #33	TBL1XR1 (ENSACCG00020004568) #36	KCNMB2 (ENSACCG00020004589)	ENSACCG00020004603	ZMAT3 (ENSACCG00020004611)	PIK3CA (ENSACCG00020004627)	ZNF639 (ENSACCG00020004651)	MFN1 (ENSACCG00020004658)
African ostrich	MODERN SPECIES	563	ENSSCUG00000007991	LRRC31 (ENSSCUG00000007993)	SAMD7 (ENSSCUG00000007994)	SEC62 (ENSSCUG00000007995)	GPR160 (ENSSCUG00000007998)	PHC3 (ENSSCUG00000008001) #7	PRKCI (ENSSCUG00000008004) #8	SKIL (ENSSCUG00000008005) #9	SLC7A14 (ENSSCUG00000008009) #14	RPL22L1 (ENSSCUG00000008010) #16	EIF5A2 (ENSSCUG00000008011) #17	SLC2A2 (ENSSCUG00000008012) #18	TNIK (ENSSCUG00000008019) #19	PLD1 (ENSSCUG00000008028) #20	TMEM212 (ENSSCUG00000008032) #21	FNDC3B (ENSSCUG00000008036) #22	GHSR (ENSSCUG00000008041) #23	TNFSF10 (ENSSCUG00000008044) #24	NCEH1 (ENSSCUG00000008045) #25	ENSSCUG00000008047 #26	ENSSCUG00000008048 #26	SPATA16 (ENSSCUG00000008049) #29	NLGN1 (ENSSCUG00000008050) #31	NAALADL2 (ENSSCUG00000008053) #33	TBL1XR1 (ENSSCUG00000008069) #36	KCNMB2 (ENSSCUG00000008078)
Australian saltwater crocodile	MODERN SPECIES	30	SEC62 (ENSCPRG00005009247)	GPR160 (ENSCPRG00005009253)	PHC3 (ENSCPRG00005009255) #7	ENSCPRG00005009280	ENSCPRG00005009283	PRKCI (ENSCPRG00005009290) #8	SKIL (ENSCPRG00005009313) #9	CLDN11 (ENSCPRG00005009317) #11	SLC7A14 (ENSCPRG00005009320) #14	RPL22L1 (ENSCPRG00005009347) #16	EIF5A2 (ENSCPRG00005009352) #17	SLC2A2 (ENSCPRG00005009357) #18	TNIK (ENSCPRG00005009378) #19	PLD1 (ENSCPRG00005009444) #20	TMEM212 (ENSCPRG00005009462) #21	FNDC3B (ENSCPRG00005009467) #22	GHSR (ENSCPRG00005009499) #23	TNFSF10 (ENSCPRG00005009508) #24	NCEH1 (ENSCPRG00005009516) #25	ECT2 (ENSCPRG00005009519) #26	SPATA16 (ENSCPRG00005009547) #29	ENSCPRG00005009577 #31	ENSCPRG00005009587 #31	NAALADL2 (ENSCPRG00005009597) #33	TBL1XR1 (ENSCPRG00005009616) #36	ENSCPRG00005009640	KCNMB2 (ENSCPRG00005009647)	ZMAT3 (ENSCPRG00005009651)	ENSCPRG00005009658	ZNF639 (ENSCPRG00005009780)	MFN1 (ENSCPRG00005009802)
Cryptodira	ANCESTRAL SPECIES	16	ENSGT00390000002757	ENSGT00390000015520	ENSGT00940000153313.C.a	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT01030000235369.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Testudinoidea	ANCESTRAL SPECIES	9	ENSGT00390000015520	ENSGT00940000153313.C.a.i	ENSGT00940000153313.C.a.j	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT01030000235369.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Emydidae	ANCESTRAL SPECIES	3	ENSGT00390000015520	ENSGT00940000153313.C.a.i	ENSGT00940000153313.C.a.j	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT01030000235369.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
painted turtle	MODERN SPECIES	2423	SEC62 (ENSCPBG00000016013)	GPR160 (ENSCPBG00000016009)	ENSCPBG00000016006	ENSCPBG00000016002	PHC3 (ENSCPBG00000015992) #7	PRKCI (ENSCPBG00000015982) #8	SKIL (ENSCPBG00000015978) #9	CLDN11 (ENSCPBG00000015976) #11	SLC7A14 (ENSCPBG00000015973) #14	RPL22L1 (ENSCPBG00000015972) #16	EIF5A2 (ENSCPBG00000015942) #17	SLC2A2 (ENSCPBG00000015940) #18	TNIK (ENSCPBG00000015935) #19	PLD1 (ENSCPBG00000015923) #20	TMEM212 (ENSCPBG00000015915) #21	FNDC3B (ENSCPBG00000015906) #22	GHSR (ENSCPBG00000015899) #23	TNFSF10 (ENSCPBG00000015898) #24	NCEH1 (ENSCPBG00000015897) #25
Three-toed box turtle	MODERN SPECIES	32	SEC62 (ENSTMTG00000019200)	GPR160 (ENSTMTG00000019296)	PHC3 (ENSTMTG00000019309) #7	AKAP4 (ENSTMTG00000019346)	ENSTMTG00000019401 #8	SKIL (ENSTMTG00000019426) #9	CLDN11 (ENSTMTG00000008172) #11	SLC7A14 (ENSTMTG00000008180) #14	RPL22L1 (ENSTMTG00000008206) #16	EIF5A2 (ENSTMTG00000008217) #17	SLC2A2 (ENSTMTG00000008232) #18	ENSTMTG00000008259	ENSTMTG00000008303 #19	PLD1 (ENSTMTG00000008407) #20	TMEM212 (ENSTMTG00000009120) #21	FNDC3B (ENSTMTG00000009145) #22	GHSR (ENSTMTG00000009177) #23	TNFSF10 (ENSTMTG00000009207) #24	NCEH1 (ENSTMTG00000009220) #25	ENSTMTG00000009230 #26	ENSTMTG00000009279 #26	SPATA16 (ENSTMTG00000009298) #29	NLGN1 (ENSTMTG00000009329) #31	NAALADL2 (ENSTMTG00000009348) #33	TBL1XR1 (ENSTMTG00000009406) #36	KCNMB2 (ENSTMTG00000009434)	ZMAT3 (ENSTMTG00000009458)	PIK3CA (ENSTMTG00000009470)	ENSTMTG00000009517	ZNF639 (ENSTMTG00000009549)	MFN1 (ENSTMTG00000009563)
Testudinidae	ANCESTRAL SPECIES	7	ENSGT00390000015520	ENSGT00940000153313.C.a.i	ENSGT00940000153313.C.a.j	ENSGT00940000154964 #7	ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT01030000235369.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Abingdon island giant tortoise	MODERN SPECIES	970	GPR160 (ENSCABG00000009066)	ENSCABG00000009065	ENSCABG00000009063	PHC3 (ENSCABG00000009059) #7	PRKCI (ENSCABG00000008952) #8	SKIL (ENSCABG00000008947) #9	CLDN11 (ENSCABG00000008944) #11	SLC7A14 (ENSCABG00000008911) #14	RPL22L1 (ENSCABG00000008910) #16	EIF5A2 (ENSCABG00000008908) #17	SLC2A2 (ENSCABG00000008797) #18	ENSCABG00000008785	ENSCABG00000008782 #19	PLD1 (ENSCABG00000008780) #20	TMEM212 (ENSCABG00000008779) #21	FNDC3B (ENSCABG00000008756) #22	GHSR (ENSCABG00000008749) #23	TNFSF10 (ENSCABG00000008748) #24	NCEH1 (ENSCABG00000008741) #25	ENSCABG00000008737 #26	ENSCABG00000008735 #26	SPATA16 (ENSCABG00000008730) #29
Goode s thornscrub tortoise	MODERN SPECIES	23	SEC62 (ENSGEVG00005018181)	GPR160 (ENSGEVG00005018171)	ENSGEVG00005018156	ENSGEVG00005018124	PHC3 (ENSGEVG00005017976) #7	PRKCI (ENSGEVG00005017924) #8	SKIL (ENSGEVG00005017894) #9	CLDN11 (ENSGEVG00005017872) #11	SLC7A14 (ENSGEVG00005017741) #14	RPL22L1 (ENSGEVG00005017709) #16	EIF5A2 (ENSGEVG00005017696) #17	SLC2A2 (ENSGEVG00005017654) #18	TNIK (ENSGEVG00005013704) #19	PLD1 (ENSGEVG00005012935) #20	TMEM212 (ENSGEVG00005012875) #21	FNDC3B (ENSGEVG00005009065) #22	GHSR (ENSGEVG00005008495) #23	TNFSF10 (ENSGEVG00005008453) #24	NCEH1 (ENSGEVG00005008435) #25	ENSGEVG00005008421 #26	ENSGEVG00005008394 #26	SPATA16 (ENSGEVG00005008353) #29	ENSGEVG00005008327 #31	NLGN1 (ENSGEVG00005008306) #31	NAALADL2 (ENSGEVG00005008241) #33	TBL1XR1 (ENSGEVG00005008179) #36	KCNMB2 (ENSGEVG00005008147)	ZMAT3 (ENSGEVG00005008132)	PIK3CA (ENSGEVG00005008110)	ENSGEVG00005008073	ZNF639 (ENSGEVG00005008054)
Chinese turtle	MODERN SPECIES	1999																FNDC3B (ENSPSIG00000006607) #22	GHSR (ENSPSIG00000006955) #23	TNFSF10 (ENSPSIG00000006994) #24	NCEH1 (ENSPSIG00000007731) #25	ECT2 (ENSPSIG00000008089) #26	SPATA16 (ENSPSIG00000008747) #29	ENSPSIG00000009490 #31
Anura	ANCESTRAL SPECIES	26						ENSGT00940000153497.E #8	ENSGT00940000158435 #9	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00950000183196.B #19	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000156299 #26	ENSGT00390000015332 #29	ENSGT00940000155789 #31	ENSGT01030000234598.a.b #33	ENSGT00940000153421.a.b #36	ENSGT00950000183039.B.b.a	ENSGT00730000111202	ENSGT00940000155531.b	ENSGT00950000183039.B.a	ENSGT00940000156335	ENSGT00390000013727.d	ENSGT01000000214413.b.a.a
Frog	MODERN SPECIES	5	lrrc31 (ENSXETG00000009215)	samd7 (ENSXETG00000026439)	sec62 (ENSXETG00000009213)	phc3 (ENSXETG00000009212) #7	prkci (ENSXETG00000009210) #8	skil (ENSXETG00000009208) #9	cldn11 (ENSXETG00000042148) #11	slc7a14 (ENSXETG00000047196) #14	rpl22l1 (ENSXETG00000038760) #16	eif5a (ENSXETG00000034500) #17	slc2a2 (ENSXETG00000039156) #18	tnik (ENSXETG00000009142) #19	tmem212 (ENSXETG00000009134) #21	pld1 (ENSXETG00000009136) #20	ENSXETG00000042406	fndc3b (ENSXETG00000023615) #22	ghsr (ENSXETG00000023610) #23	ENSXETG00000047368 #34	tnfsf10 (ENSXETG00000030595) #24	nceh1 (ENSXETG00000038694) #25	ect2 (ENSXETG00000023596) #26	ENSXETG00000030915 #34	ENSXETG00000044786	nlgn1 (ENSXETG00000001525) #31	naaladl2 (ENSXETG00000040453) #33	tbl1xr1 (ENSXETG00000001521) #36	kcnmb2 (ENSXETG00000037867)	zmat3 (ENSXETG00000007251)	pik3ca (ENSXETG00000007252)	kcnmb3 (ENSXETG00000007254)	znf639 (ENSXETG00000007256)
Leishan spiny toad	MODERN SPECIES	7	ENSLLEG00000018343	PHC3 (ENSLLEG00000018417) #7	ENSLLEG00000019041	PRKCI (ENSLLEG00000019152) #8	SKIL (ENSLLEG00000020158) #9	CLDN11 (ENSLLEG00000020217) #11	SLC7A14 (ENSLLEG00000020272) #14	ENSLLEG00000020606	RPL22L1 (ENSLLEG00000020698) #16	ENSLLEG00000020994	SLC2A2 (ENSLLEG00000021022) #18	TNIK (ENSLLEG00000021324) #19	PLD1 (ENSLLEG00000024604) #20	TMEM212 (ENSLLEG00000024853) #21	ENSLLEG00000024901	FNDC3B (ENSLLEG00000024951) #22	GHSR (ENSLLEG00000025112) #23	TNFSF10 (ENSLLEG00000025153) #24	ENSLLEG00000025254 #25	ENSLLEG00000025509 #25	ENSLLEG00000025608	ECT2 (ENSLLEG00000025676) #26	SPATA16 (ENSLLEG00000026330) #29	ENSLLEG00000026804	NLGN1 (ENSLLEG00000026838) #31	NAALADL2 (ENSLLEG00000026863) #33	ENSLLEG00000026984	TBL1XR1 (ENSLLEG00000027031) #36	ENSLLEG00000027333	KCNMB2 (ENSLLEG00000027366)	ZMAT3 (ENSLLEG00000027411)
Coelacanth	MODERN SPECIES	877																FNDC3B (ENSLACG00000014151) #22	GHSR (ENSLACG00000013879) #23	NCEH1 (ENSLACG00000013326) #25	ECT2 (ENSLACG00000012714) #26	SPATA16 (ENSLACG00000011958) #29	ENSLACG00000009411 #31	nlgn1 (ENSLACG00000003894) #31
Actinopterygii	ANCESTRAL SPECIES	3	ENSGT00950000182972.a.a.a.a.b	ENSGT00940000163491	ENSGT00940000154287.a	ENSGT00940000162883	ENSGT00940000162413	ENSGT01050000244840.B	ENSGT01030000235093	ENSGT00390000017146.b	ENSGT00950000182950.B	ENSGT00940000164099.a.a	ENSGT00940000156984.b	ENSGT01100000263555.a.a.b	ENSGT00940000156023	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000158521	ENSGT00390000010543	ENSGT00940000156083	ENSGT00940000160645.o	ENSGT00940000154200.A.a	ENSGT00390000017163	ENSGT00940000157563	ENSGT01030000234518.C.a.b.a.a	ENSGT01030000234518.C.a.b.a.b	ENSGT01100000263536.C	ENSGT00950000182999.b.b	ENSGT00940000155972.B
Reedfish	MODERN SPECIES	10	ENSECRG00000006964 #9	SKIL (ENSECRG00000006973) #9	prkci (ENSECRG00000006878) #8	ENSECRG00000006821 #7	PHC3 (ENSECRG00000006806) #7	cldn11b (ENSECRG00000006796) #11	slc7a14a (ENSECRG00000006781) #14	rpl22l1 (ENSECRG00000006767) #16	eif5a (ENSECRG00000006755) #17	slc2a2 (ENSECRG00000006722) #18	tnika (ENSECRG00000006602) #19	ENSECRG00000006565	ENSECRG00000006562	PLD1 (ENSECRG00000006532) #20	TMEM212 (ENSECRG00000006509) #21	fndc3ba (ENSECRG00000006480) #22	ghsra (ENSECRG00000006465) #23	tnfsf10 (ENSECRG00000006455) #24	nceh1b.1 (ENSECRG00000006444) #25	ENSECRG00000006437	PPP2R3A (ENSECRG00000006423)	msl2a (ENSECRG00000006410)	pccb (ENSECRG00000006376)	STAG1 (ENSECRG00000006334)	slc35g2a (ENSECRG00000006303)	NCK1 (ENSECRG00000015624)	bdh1 (ENSECRG00000015587)	gyg1b (ENSECRG00000015561)	HLTF (ENSECRG00000015441)	cpb1 (ENSECRG00000015379)	AGTR1 (ENSECRG00000015345)
Neopterygii	ANCESTRAL SPECIES	12	ENSGT00940000165431	ENSGT00390000015520	ENSGT00940000158435 #9	ENSGT00940000153497.E #8	ENSGT00940000154964.z #7	ENSGT00890000139496 #11	ENSGT00940000155893.b #14	ENSGT00940000154509 #16	ENSGT00390000003738.a.b #17	ENSGT00940000155708 #18	ENSGT00940000163015	ENSGT00950000183196.B #19	ENSGT01010000223088	ENSGT00940000155015 #20	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a #23	ENSGT01070000253816.b #24	ENSGT00940000156699 #25	ENSGT00940000154659.b	ENSGT00390000016814	ENSGT00940000157741	ENSGT00950000182972.a.a.a.b	ENSGT00940000153249.b.d.a	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00910000144305	ENSGT00940000154674	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b
Osteoglossocephalai	ANCESTRAL SPECIES	142	ENSGT00940000157819	ENSGT00940000154674.q.b	ENSGT00940000154674.q.a	ENSGT00910000144305	ENSGT00940000156929	ENSGT00940000156601	ENSGT00940000153249.b.d.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814	ENSGT01070000253816.b #24	ENSGT00940000156699.i #25	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT01010000223088	ENSGT01100000263484.C.b.a.a.a #23	ENSGT00940000155015.g.a #20	ENSGT00950000183196.B #19	ENSGT00940000163015	ENSGT00940000155708 #18	ENSGT00390000003738.a.b.b #17	ENSGT00390000003738.a.b.a #17	ENSGT00940000154509 #16	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11
Clupeocephala	ANCESTRAL SPECIES	36	ENSGT00940000160269	ENSGT00940000182355	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000154674.q.b	ENSGT00940000156929	ENSGT00940000156601	ENSGT00940000153249.b.d.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814	ENSGT01070000253816.b #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT01010000223088	ENSGT00950000183196.B #19	ENSGT00940000163015	ENSGT00940000155708 #18	ENSGT00390000003738.a.b.b #17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a
Euteleosteomorpha	ANCESTRAL SPECIES	169	ENSGT00940000164644	ENSGT00940000155528.t.d.b	ENSGT00940000154954.ob	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT01010000223088	ENSGT00950000183196.B.e #19	ENSGT00940000163015	ENSGT00940000155708 #18	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a
Acanthomorphata	ANCESTRAL SPECIES	169			ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT01010000223088	ENSGT00950000183196.B.e #19	ENSGT00940000163015	ENSGT00940000155708 #18	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a
Euacanthomorphacea	ANCESTRAL SPECIES	11	ENSGT00940000164644	ENSGT00940000155528.t.d.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT01010000223088	ENSGT00950000183196.B.e #19	ENSGT00940000163015	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a
Pinecone sodierfish	MODERN SPECIES	14	ATR (ENSMMDG00005018966)	ENSMMDG00005018943	ENSMMDG00005018938	STAG1 (ENSMMDG00005017386)	pccb (ENSMMDG00005017211)	MSL2 (ENSMMDG00005017191)	tnfsf10 (ENSMMDG00005017190) #24	nceh1a (ENSMMDG00005017157) #25	ENSMMDG00005017155	ENSMMDG00005017152	ENSMMDG00005017150	ENSMMDG00005017146	ENSMMDG00005017144	ENSMMDG00005017138	PPP2R3A (ENSMMDG00005017110)	fndc3ba (ENSMMDG00005017092) #22	ghsra (ENSMMDG00005017091) #23	ENSMMDG00005017089	pld1a (ENSMMDG00005009280) #20	tnika (ENSMMDG00005004982) #19	slc2a2 (ENSMMDG00005004711) #18	ENSMMDG00005004696 ##17	ENSMMDG00005004693	slc7a14a (ENSMMDG00005004683) #14	cldn11a (ENSMMDG00005004676) #11	ENSMMDG00005004034	plppr3a (ENSMMDG00005004003)	palm1b (ENSMMDG00005003995)	ptbp1a (ENSMMDG00005002713)	efna2a (ENSMMDG00005002578)	snap23.1 (ENSMMDG00005002565)
Percomorphaceae	ANCESTRAL SPECIES	13	ENSGT00940000164644	ENSGT00940000155528.t.d.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT01010000223088	ENSGT00950000183196.B.e #19	ENSGT00940000163015	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a
Tiger tail seahorse	MODERN SPECIES	204	slc1a8b (ENSHCOG00000015326)	ELAVL1 (ENSHCOG00000015240)	pak2a (ENSHCOG00000015221)	ENSHCOG00000015160	gyg1a (ENSHCOG00000015128)	pls1 (ENSHCOG00000015112)	ENSHCOG00000015076	ENSHCOG00000015065	ENSHCOG00000015054	STAG1 (ENSHCOG00000015034)	pccb (ENSHCOG00000014950)	msl2b (ENSHCOG00000014901)	tnfsf10 (ENSHCOG00000014895) #24	nceh1a (ENSHCOG00000014877) #25	PPP2R3A (ENSHCOG00000014854)	fndc3ba (ENSHCOG00000014698) #22	ghsra (ENSHCOG00000014645) #23	pld1a (ENSHCOG00000014484) #20	tnika (ENSHCOG00000014374) #19	slc2a2 (ENSHCOG00000014036) #18	ENSHCOG00000014026 ##17
Percomorphaceae_B	ANCESTRAL SPECIES	11	ENSGT00940000164644	ENSGT00940000155528.t.d.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT01010000223088	ENSGT00950000183196.B.e #19	ENSGT00940000163015	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a
Ovalentaria	ANCESTRAL SPECIES	10	ENSGT00940000163478	ENSGT01080000257344.a.b.a.a.a.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
Atherinomorphae	ANCESTRAL SPECIES	11	ENSGT00940000163478	ENSGT01080000257344.a.b.b.a.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908.m.b	ENSGT00940000164613
Cyprinodontiformes	ANCESTRAL SPECIES	21	ENSGT00940000172403	ENSGT01080000257344.a.b.a.b.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908.m.b	ENSGT00940000164613
Aplocheiloidei	ANCESTRAL SPECIES	29								ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908.m.b	ENSGT00940000164613
Mangrove rivulus	MODERN SPECIES	488																fndc3ba (ENSKMAG00000006423) #22	ghsra (ENSKMAG00000006440) #23	pld1a (ENSKMAG00000006463) #20
Turquoise killifish	MODERN SPECIES	1625	ENSNFUG00015020870	ENSNFUG00015020871	ENSNFUG00015020876	ENSNFUG00015020908	ENSNFUG00015020910	ENSNFUG00015020911	ENSNFUG00015020913	Nfu_g_1_015355 (ENSNFUG00015020955)	ENSNFUG00015020956	STAG1 (ENSNFUG00015020977)	pccb (ENSNFUG00015021432)	MSL2 (ENSNFUG00015022035)	tnfsf10 (ENSNFUG00015022044) #24	nceh1a (ENSNFUG00015022072) #25	PPP2R3A (ENSNFUG00015022095)	FNDC3BA (ENSNFUG00015022164) #22	ghsra (ENSNFUG00015023050) #23	PLD1A (ENSNFUG00015023215) #20	tnika (ENSNFUG00015024742) #19	slc2a2 (ENSNFUG00015024933) #18	Nfu_g_1_015298 (ENSNFUG00015025010) ##17	ENSNFUG00015025011	SLC7A14A (ENSNFUG00015025015) #14	CLDN11A (ENSNFUG00015025017) #11	ENSNFUG00015025019	GRIN3B (ENSNFUG00015025020)	ENSNFUG00015025022	plppr3a (ENSNFUG00015025024)	palm1b (ENSNFUG00015025026)	ptbp1a (ENSNFUG00015025081)	EFNA2 (ENSNFUG00015025248)
Cyprinodontoidei	ANCESTRAL SPECIES	8	ENSGT00940000172403	ENSGT01080000257344.a.b.a.b.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000173357	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908.m.b	ENSGT00940000173788
Poeciliinae	ANCESTRAL SPECIES	8	ENSGT00940000155528.t.d.b	ENSGT00940000154954.ob	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000173357	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908.m.b	ENSGT00940000173788
Poecilia	ANCESTRAL SPECIES	10	ENSGT00940000155528.t.d.b	ENSGT00940000154954.ob	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000173357	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908.m.b	ENSGT00940000173788
NAME_6	ANCESTRAL SPECIES	3	ENSGT00940000161517.D.d.b.q.a	ENSGT01080000257344.a.a.c.a	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000173357	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908.m.b	ENSGT00940000173788
Amazon molly	MODERN SPECIES	410	ENSPFOG00000024312	ENSPFOG00000023761	pak2a (ENSPFOG00000014052)	HLTF (ENSPFOG00000013939)	gyg1a (ENSPFOG00000013877)	pls1 (ENSPFOG00000013695)	ATR (ENSPFOG00000013382)	ENSPFOG00000013359	ENSPFOG00000020456	STAG1 (ENSPFOG00000012776)	pccb (ENSPFOG00000012577)	MSL2 (ENSPFOG00000012565)	tnfsf10 (ENSPFOG00000012533) #24	nceh1a (ENSPFOG00000012476) #25	PPP2R3A (ENSPFOG00000012299)	fndc3ba (ENSPFOG00000012010) #22	ghsra (ENSPFOG00000011982) #23	pld1a (ENSPFOG00000011652) #20	tnika (ENSPFOG00000022073) #19	slc2a2 (ENSPFOG00000011191) #18	ENSPFOG00000011143 ##17	slc7a14a (ENSPFOG00000011005) #14	cldn11a (ENSPFOG00000010987) #11	ENSPFOG00000010934	plppr3a (ENSPFOG00000010860)	palm1b (ENSPFOG00000010854)	ptbp1a (ENSPFOG00000010578)	efna2a (ENSPFOG00000010550)	ENSPFOG00000010513	sptb (ENSPFOG00000010067)	ENSPFOG00000024444
Sailfin molly	MODERN SPECIES	435																fndc3ba (ENSPLAG00000007741) #22	ghsra (ENSPLAG00000007785) #23	pld1a (ENSPLAG00000007870) #20	tnika (ENSPLAG00000007894) #19	slc2a2 (ENSPLAG00000008118) #18	ENSPLAG00000008169 ##17	ENSPLAG00000008180	slc7a14a (ENSPLAG00000008201) #14	cldn11a (ENSPLAG00000008224) #11
Guppy	MODERN SPECIES	453	ENSPREG00000011188	ENSPREG00000011197	pak2a (ENSPREG00000011209)	HLTF (ENSPREG00000011232)	gyg1a (ENSPREG00000011258)	ENSPREG00000011281	ATR (ENSPREG00000011358)	ENSPREG00000011538	ENSPREG00000011632	STAG1 (ENSPREG00000011651)	pccb (ENSPREG00000011771)	msl2b (ENSPREG00000011849)	tnfsf10 (ENSPREG00000011865) #24	nceh1a (ENSPREG00000011914) #25	PPP2R3A (ENSPREG00000012224)	fndc3ba (ENSPREG00000012267) #22	ghsra (ENSPREG00000012316) #23	pld1a (ENSPREG00000012332) #20	ENSPREG00000012382 ##19	ENSPREG00000012435	slc2a2 (ENSPREG00000012559) #18	ENSPREG00000012784 ##17	ENSPREG00000012792 ##17	slc7a14a (ENSPREG00000012800) #14	cldn11a (ENSPREG00000012827) #11	ENSPREG00000012869	plppr3a (ENSPREG00000012885)	palm1b (ENSPREG00000012901)	ptbp1a (ENSPREG00000012916)	efna2a (ENSPREG00000012960)	snap23.1 (ENSPREG00000012979)
Platyfish	MODERN SPECIES	10	ENSXMAG00000026057	ENSXMAG00000029452	pak2a (ENSXMAG00000009346)	HLTF (ENSXMAG00000009324)	gyg1a (ENSXMAG00000009319)	pls1 (ENSXMAG00000009297)	ATR (ENSXMAG00000009281)	ENSXMAG00000009269	ENSXMAG00000020152	STAG1 (ENSXMAG00000009241)	pccb (ENSXMAG00000009213)	msl2b (ENSXMAG00000009209)	tnfsf10 (ENSXMAG00000009205) #24	nceh1a (ENSXMAG00000024889) #25	PPP2R3A (ENSXMAG00000029013)	fndc3ba (ENSXMAG00000009157) #22	ghsra (ENSXMAG00000009156) #23	pld1a (ENSXMAG00000009132) #20	tnika (ENSXMAG00000009078) #19	slc2a2 (ENSXMAG00000009046) #18	ENSXMAG00000009045 ##17	ENSXMAG00000027211	ENSXMAG00000027569	esr2b (ENSXMAG00000023811)	ENSXMAG00000000634	ENSXMAG00000004941	ppp2r5eb (ENSXMAG00000021713)	snapc1b (ENSXMAG00000017760)	AKAP6 (ENSXMAG00000017748)	NPAS3 (ENSXMAG00000000074)	egln3 (ENSXMAG00000000068)
NAME_4	ANCESTRAL SPECIES	182			ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000173357	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908.m.b
Mummichog	MODERN SPECIES	2352			pak2a (ENSFHEG00000017252)	HLTF (ENSFHEG00000017298)	gyg1a (ENSFHEG00000017302)	ENSFHEG00000017347	ATR (ENSFHEG00000000908)	ENSFHEG00000017518	ENSFHEG00000017522	STAG1 (ENSFHEG00000017695)	pccb (ENSFHEG00000017764)	MSL2 (ENSFHEG00000017776)	tnfsf10 (ENSFHEG00000017784) #24	nceh1a (ENSFHEG00000000459) #25	PPP2R3A (ENSFHEG00000017821)	fndc3ba (ENSFHEG00000018007) #22	ghsra (ENSFHEG00000018039) #23	pld1a (ENSFHEG00000018170) #20	ENSFHEG00000018311	slc2a2 (ENSFHEG00000018520) #18	ENSFHEG00000018532 ##17	slc7a14a (ENSFHEG00000018552) #14	cldn11a (ENSFHEG00000018555) #11	ENSFHEG00000018592	plppr3a (ENSFHEG00000018628)	palm1b (ENSFHEG00000018638)	ptbp1a (ENSFHEG00000018719)	efna2a (ENSFHEG00000018732)	snap23.1 (ENSFHEG00000018758)	sptb (ENSFHEG00000018922)
Sheepshead minnow	MODERN SPECIES	228	slc41a1 (ENSCVAG00000020069)	ARHGAP5 (ENSCVAG00000020044)	nubpl (ENSCVAG00000020028)	ENSCVAG00000019985	gyg1a (ENSCVAG00000019972)	ENSCVAG00000019928	ATR (ENSCVAG00000019865)	ENSCVAG00000019706	ENSCVAG00000019467	STAG1 (ENSCVAG00000019455)	pccb (ENSCVAG00000019254)	msl2b (ENSCVAG00000019210)	tnfsf10 (ENSCVAG00000019205) #24	nceh1a (ENSCVAG00000019159) #25	PPP2R3A (ENSCVAG00000019151)	fndc3ba (ENSCVAG00000019127) #22	ghsra (ENSCVAG00000019020) #23	pld1a (ENSCVAG00000018834) #20	tnika (ENSCVAG00000017908) #19	slc2a2 (ENSCVAG00000017808) #18	ENSCVAG00000017153
Oryzias	ANCESTRAL SPECIES	3	ENSGT00530000064359.c.b.p.h.a	ENSGT01100000263475.g.b.i.a.a	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908.m.b	ENSGT00940000164613
Oryzias_b	ANCESTRAL SPECIES	12	ENSGT01100000263475.g.b.i.a.a	ENSGT00530000064359.c.b.p.h.a.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e.c #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908.m.b	ENSGT00940000173788
Indian medaka	MODERN SPECIES		ENSOMEG00000015623	ENSOMEG00000015648	pak2a (ENSOMEG00000015728)	HLTF (ENSOMEG00000015810)	gyg1a (ENSOMEG00000015841)	ENSOMEG00000015882	ENSOMEG00000015904	ENSOMEG00000016009	ENSOMEG00000016041	STAG1 (ENSOMEG00000016126)	pccb (ENSOMEG00000016174)	MSL2 (ENSOMEG00000016208)	tnfsf10 (ENSOMEG00000016245) #24	nceh1a (ENSOMEG00000016263) #25	PPP2R3A (ENSOMEG00000001029)	fndc3ba (ENSOMEG00000000414) #22	ghsra (ENSOMEG00000016558) #23	pld1a (ENSOMEG00000016600) #20	ENSOMEG00000016608 #19	tnika (ENSOMEG00000016782) #19	slc2a2 (ENSOMEG00000016842) #18	ENSOMEG00000016893 ##17	slc7a14a (ENSOMEG00000016930) #14	cldn11a (ENSOMEG00000016955) #11	ENSOMEG00000016979	plppr3a (ENSOMEG00000000426)	palm1b (ENSOMEG00000017032)	ptbp1a (ENSOMEG00000017095)	efna2a (ENSOMEG00000017128)	snap23.1 (ENSOMEG00000017178)	sptb (ENSOMEG00000017472)
Javanese ricefish	MODERN SPECIES	14	ENSOJAG00000004047	ENSOJAG00000004092	ENSOJAG00000004180	ENSOJAG00000004207	ENSOJAG00000004238	pak2a (ENSOJAG00000004434)	HLTF (ENSOJAG00000005327)	gyg1a (ENSOJAG00000005442)	ENSOJAG00000005798	ENSOJAG00000005809	pccb (ENSOJAG00000005988)	MSL2 (ENSOJAG00000006344)	tnfsf10 (ENSOJAG00000006351) #24	nceh1a (ENSOJAG00000006422) #25	ENSOJAG00000006430	fndc3ba (ENSOJAG00000007151) #22	ghsra (ENSOJAG00000008643) #23	pld1a (ENSOJAG00000009173) #20	tnika (ENSOJAG00000012927) #19	slc2a2 (ENSOJAG00000014781) #18	ENSOJAG00000014890 ##17	slc7a14a (ENSOJAG00000014900) #14	cldn11a (ENSOJAG00000014928) #11	ENSOJAG00000014945	plppr3a (ENSOJAG00000014956)	palm1b (ENSOJAG00000014967)	ptbp1a (ENSOJAG00000015003)	efna2a (ENSOJAG00000015313)	snap23.1 (ENSOJAG00000015327)	ENSOJAG00000015445	ENSOJAG00000015503
Oryzias_a	ANCESTRAL SPECIES	11	ENSGT00530000064359.c.b.p.h.a	ENSGT01100000263475.g.b.i.a.a	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908.m.b	ENSGT00940000164613
Japanese Medaka HdrR	MODERN SPECIES	14	ENSORLG00000012423	ENSORLG00000028969	ENSORLG00000012363	HLTF (ENSORLG00000012329)	gyg1a (ENSORLG00000012299)	pls1 (ENSORLG00000012266)	ATR (ENSORLG00000012184)	ENSORLG00000030328	ENSORLG00000012140	STAG1 (ENSORLG00000012127)	pccb (ENSORLG00000011884)	MSL2 (ENSORLG00000011857)	tnfsf10 (ENSORLG00000011849) #24	nceh1a (ENSORLG00000021950) #25	PPP2R3A (ENSORLG00000011803)	fndc3ba (ENSORLG00000011774) #22	ghsra (ENSORLG00000011709) #23	pld1a (ENSORLG00000011699) #20	tnika (ENSORLG00000011667) #19	slc2a2 (ENSORLG00000011579) #18	ENSORLG00000025088 ##17	ENSORLG00000022964	slc7a14a (ENSORLG00000011474) #14	cldn11a (ENSORLG00000011459) #11	ENSORLG00000011452	plppr3a (ENSORLG00000011444)	palm1b (ENSORLG00000011437)	ptbp1a (ENSORLG00000011430)	efna2a (ENSORLG00000028569)	ENSORLG00000011396	sptb (ENSORLG00000011353)
Chinese medaka	MODERN SPECIES	1087					pak2a (ENSOSIG00000021066)	HLTF (ENSOSIG00000021043)	gyg1a (ENSOSIG00000021034)	pls1 (ENSOSIG00000020947)	ENSOSIG00000020929	ENSOSIG00000020927	STAG1 (ENSOSIG00000020689)	MSL2 (ENSOSIG00000020672)	tnfsf10 (ENSOSIG00000020671) #24	nceh1a (ENSOSIG00000020670) #25	PPP2R3A (ENSOSIG00000020423)	fndc3ba (ENSOSIG00000020327) #22	ghsra (ENSOSIG00000020306) #23	pld1a (ENSOSIG00000011731) #20	tnika (ENSOSIG00000010734) #19	slc2a2 (ENSOSIG00000010080) #18	ENSOSIG00000010059 ##17	slc7a14a (ENSOSIG00000010058) #14	cldn11a (ENSOSIG00000010057) #11	ENSOSIG00000010056	plppr3a (ENSOSIG00000010055)	palm1b (ENSOSIG00000010054)	ptbp1a (ENSOSIG00000009402)
Ovalentaria_B	ANCESTRAL SPECIES	24	ENSGT01080000257344.a.b.a.b.a	ENSGT00940000161517.D.d.b.q.b.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
Cichlidae	ANCESTRAL SPECIES	23			ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
Pseudocrenilabrinae	ANCESTRAL SPECIES	8	ENSGT00950000182941.a.a.a.b	ENSGT00940000155086.A	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
Nile tilapia	MODERN SPECIES	10	ENSONIG00000037588	HLTF (ENSONIG00000000740)	gyg1a (ENSONIG00000000749)	ENSONIG00000000752	ENSONIG00000033889	ATR (ENSONIG00000000770)	ENSONIG00000000774	ENSONIG00000000779	STAG1 (ENSONIG00000000780)	pccb (ENSONIG00000000798)	MSL2 (ENSONIG00000000807)	tnfsf10 (ENSONIG00000000810) #24	nceh1a (ENSONIG00000027840) #25	PPP2R3A (ENSONIG00000000815)	ENSONIG00000035691	fndc3ba (ENSONIG00000000825) #22	ghsra (ENSONIG00000030026) #23	pld1a (ENSONIG00000000843) #20	tnika (ENSONIG00000000857) #19	slc2a2 (ENSONIG00000000872) #18	ENSONIG00000033117 ##17	slc7a14a (ENSONIG00000000882) #14	cldn11a (ENSONIG00000031844) #11	ENSONIG00000028013	ENSONIG00000000888	plppr3a (ENSONIG00000000893)	palm1b (ENSONIG00000000897)	ptbp1a (ENSONIG00000000899)	efna2a (ENSONIG00000000905)	snap23.1 (ENSONIG00000000907)	sptb (ENSONIG00000000914)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	6	ENSGT00950000182941.a.a.a.b	ENSGT00940000155086.A	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
Haplochromini	ANCESTRAL SPECIES	7	ENSGT00950000182941.a.a.a.b	ENSGT00940000155086.A	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
Burton s mouthbrooder	MODERN SPECIES	345	ENSHBUG00000013938	OTOF (ENSHBUG00000014042)	pak2a (ENSHBUG00000014148)	HLTF (ENSHBUG00000014165)	gyg1a (ENSHBUG00000014361)	pls1 (ENSHBUG00000014404)	ATR (ENSHBUG00000014512)	ENSHBUG00000014542	ENSHBUG00000014550	STAG1 (ENSHBUG00000014711)	pccb (ENSHBUG00000000432)	MSL2 (ENSHBUG00000001149)	tnfsf10 (ENSHBUG00000001166) #24	nceh1a (ENSHBUG00000014795) #25	PPP2R3A (ENSHBUG00000014845)	fndc3ba (ENSHBUG00000014984) #22	ghsra (ENSHBUG00000015039) #23	pld1a (ENSHBUG00000015157) #20	tnika (ENSHBUG00000015247) #19	slc2a2 (ENSHBUG00000015282) #18	ENSHBUG00000015297 ##17	slc7a14a (ENSHBUG00000015325) #14	cldn11a (ENSHBUG00000015343) #11	ENSHBUG00000015352	plppr3a (ENSHBUG00000015362)	palm1b (ENSHBUG00000015394)	ptbp1a (ENSHBUG00000015463)	efna2a (ENSHBUG00000001072)	snap23.1 (ENSHBUG00000015486)	sptb (ENSHBUG00000015658)	ENSHBUG00000015675
Haplochromini_A	ANCESTRAL SPECIES	7	ENSGT00950000182941.a.a.a.b	ENSGT00940000155086.A	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
P. nyererei	MODERN SPECIES	365	ENSPNYG00000007237	OTOF (ENSPNYG00000007145)	pak2a (ENSPNYG00000007078)	HLTF (ENSPNYG00000007026)	gyg1a (ENSPNYG00000006995)	pls1 (ENSPNYG00000006960)	ATR (ENSPNYG00000006873)	ENSPNYG00000006762	ENSPNYG00000006732	STAG1 (ENSPNYG00000006642)	pccb (ENSPNYG00000006591)	MSL2 (ENSPNYG00000006581)	tnfsf10 (ENSPNYG00000006557) #24	nceh1a (ENSPNYG00000006555) #25	PPP2R3A (ENSPNYG00000006535)	fndc3ba (ENSPNYG00000006456) #22	ghsra (ENSPNYG00000006289) #23	pld1a (ENSPNYG00000006177) #20	tnika (ENSPNYG00000006051) #19	slc2a2 (ENSPNYG00000006009) #18	ENSPNYG00000005990 ##17	slc7a14a (ENSPNYG00000005958) #14	cldn11a (ENSPNYG00000005942) #11	ENSPNYG00000005757	plppr3a (ENSPNYG00000005704)	palm1b (ENSPNYG00000005687)	ptbp1a (ENSPNYG00000005619)	efna2a (ENSPNYG00000005581)	snap23.1 (ENSPNYG00000005546)	sptb (ENSPNYG00000005408)	ENSPNYG00000005358
Haplochromini_B	ANCESTRAL SPECIES	13	ENSGT00950000182941.a.a.a.b	ENSGT00940000155086.A	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
Zebra mbuna	MODERN SPECIES	1101	GRM1 (ENSMZEG00005013134)	SHPRH (ENSMZEG00005013157)	ENSMZEG00005013198	fbxo30a (ENSMZEG00005013206)	stx11a (ENSMZEG00005013214)	STX11 (ENSMZEG00005013223)	ENSMZEG00005013243	rmnd1 (ENSMZEG00005013253)	ENSMZEG00005013261	ENSMZEG00005013279	ENSMZEG00005013348	ENSMZEG00005013413	TULP4 (ENSMZEG00005013429)	slc18b1 (ENSMZEG00005013443)	ENSMZEG00005013453	fndc3ba (ENSMZEG00005013476) #22	ghsra (ENSMZEG00005013543) #23	pld1a (ENSMZEG00005013951) #20	tnika (ENSMZEG00005014006) #19	slc2a2 (ENSMZEG00005014050) #18	ENSMZEG00005014062 ##17	slc7a14a (ENSMZEG00005014071) #14	cldn11a (ENSMZEG00005014083) #11	ENSMZEG00005014111	plppr3a (ENSMZEG00005014237)	palm1b (ENSMZEG00005014249)	ptbp1a (ENSMZEG00005014265)	efna2a (ENSMZEG00005014287)	snap23.1 (ENSMZEG00005014298)	sptb (ENSMZEG00005014336)	ENSMZEG00005014390
Eastern happy	MODERN SPECIES	10	ENSACLG00000005355	OTOF (ENSACLG00000005391)	pak2a (ENSACLG00000005452)	HLTF (ENSACLG00000005486)	gyg1a (ENSACLG00000005555)	pls1 (ENSACLG00000005562)	ATR (ENSACLG00000005624)	ENSACLG00000005717	ENSACLG00000005731	STAG1 (ENSACLG00000005739)	pccb (ENSACLG00000006092)	msl2b (ENSACLG00000006145)	tnfsf10 (ENSACLG00000006153) #24	nceh1a (ENSACLG00000006160) #25	PPP2R3A (ENSACLG00000006170)	fndc3ba (ENSACLG00000006238) #22	ghsra (ENSACLG00000006359) #23	pld1a (ENSACLG00000006369) #20	tnika (ENSACLG00000006881) #19	slc2a2 (ENSACLG00000007017) #18	ENSACLG00000007035 ##17	slc7a14a (ENSACLG00000007049) #14	cldn11a (ENSACLG00000007066) #11	ENSACLG00000007070	plppr3a (ENSACLG00000007276)	palm1b (ENSACLG00000007286)	ptbp1a (ENSACLG00000007307)	efna2a (ENSACLG00000007371)	snap23.1 (ENSACLG00000007376)	sptb (ENSACLG00000007396)	ENSACLG00000007474
Lyretail cichlid	MODERN SPECIES	347	ENSNBRG00000008546	OTOF (ENSNBRG00000008594)	pak2a (ENSNBRG00000008701)	HLTF (ENSNBRG00000008743)	gyg1a (ENSNBRG00000008792)	pls1 (ENSNBRG00000008820)	ATR (ENSNBRG00000008884)	sh3glb1b (ENSNBRG00000009120)	ENSNBRG00000009171	STAG1 (ENSNBRG00000009191)	pccb (ENSNBRG00000009257)	msl2b (ENSNBRG00000009306)	tnfsf10 (ENSNBRG00000009317) #24	nceh1a (ENSNBRG00000009343) #25	PPP2R3A (ENSNBRG00000009358)	fndc3ba (ENSNBRG00000009385) #22	pld1a (ENSNBRG00000009444) #20	tnika (ENSNBRG00000009497) #19	slc2a2 (ENSNBRG00000009857) #18	ENSNBRG00000009900 ##17	cldn11a (ENSNBRG00000009909) #11	ENSNBRG00000009939	plppr3a (ENSNBRG00000010075)	palm1b (ENSNBRG00000010092)	ptbp1a (ENSNBRG00000010117)	efna2a (ENSNBRG00000010148)	ENSNBRG00000010165	sptb (ENSNBRG00000010186)	ENSNBRG00000010271	ENSNBRG00000010283	ENSNBRG00000010306
Midas cichlid	MODERN SPECIES	1000	ENSACIG00000005019	pak2a (ENSACIG00000005026)	ENSACIG00000005056	HLTF (ENSACIG00000005072)	gyg1a (ENSACIG00000005221)	pls1 (ENSACIG00000005238)	ATR (ENSACIG00000005292)	ENSACIG00000005488	ENSACIG00000005530	STAG1 (ENSACIG00000005560)	pccb (ENSACIG00000005624)	msl2b (ENSACIG00000005663)	tnfsf10 (ENSACIG00000005683) #24	nceh1a (ENSACIG00000005710) #25	PPP2R3A (ENSACIG00000005818)	fndc3ba (ENSACIG00000005860) #22	ghsra (ENSACIG00000005906) #23	pld1a (ENSACIG00000005920) #20	tnika (ENSACIG00000005976) #19	slc2a2 (ENSACIG00000006035) #18	ENSACIG00000006058 ##17	slc7a14a (ENSACIG00000006073) #14	cldn11a (ENSACIG00000006099) #11	ENSACIG00000006138	plppr3a (ENSACIG00000006245)	palm1b (ENSACIG00000006274)	ptbp1a (ENSACIG00000006286)	efna2a (ENSACIG00000006317)	snap23.1 (ENSACIG00000006331)	sptb (ENSACIG00000006427)	ENSACIG00000006506
Pomacentridae	ANCESTRAL SPECIES	22		ENSGT00940000161517.D.d.b.q.b.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000163015	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908
Pomacentridae_A	ANCESTRAL SPECIES	57		ENSGT00940000161517.D.d.b.q.b.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000163117
Amphiprion	ANCESTRAL SPECIES	83	ENSGT00940000172403	ENSGT00940000161517.D.d.b.q.a.h.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000163117
Clown anemonefish	MODERN SPECIES	149														ENSAOCG00000020819	PPP2R3A (ENSAOCG00000020781)	fndc3ba (ENSAOCG00000001533) #22	ghsra (ENSAOCG00000020613) #23	pld1a (ENSAOCG00000001520) #20	tnika (ENSAOCG00000020496) #19	slc2a2 (ENSAOCG00000020368) #18	ENSAOCG00000020007 ##17	slc7a14a (ENSAOCG00000001472) #14	cldn11a (ENSAOCG00000019907) #11	ENSAOCG00000019883	plppr3a (ENSAOCG00000019867)	palm1b (ENSAOCG00000019852)	ptbp1a (ENSAOCG00000019831)	efna2a (ENSAOCG00000001457)	snap23.1 (ENSAOCG00000001447)	sptb (ENSAOCG00000019733)	ENSAOCG00000019596
Orange clownfish	MODERN SPECIES	9	ENSAPEG00000012643	pak2a (ENSAPEG00000012572)	HLTF (ENSAPEG00000012535)	gyg1a (ENSAPEG00000012489)	pls1 (ENSAPEG00000012436)	ATR (ENSAPEG00000012276)	ENSAPEG00000012216	ENSAPEG00000012204	STAG1 (ENSAPEG00000012085)	pccb (ENSAPEG00000012015)	MSL2 (ENSAPEG00000011998)	tnfsf10 (ENSAPEG00000011988) #24	nceh1a (ENSAPEG00000011977) #25	ENSAPEG00000011942	PPP2R3A (ENSAPEG00000011890)	fndc3ba (ENSAPEG00000011805) #22	ghsra (ENSAPEG00000011776) #23	pld1a (ENSAPEG00000011649) #20	tnika (ENSAPEG00000011585) #19	slc2a2 (ENSAPEG00000011553) #18	ENSAPEG00000011541 ##17	slc7a14a (ENSAPEG00000011494) #14	cldn11a (ENSAPEG00000011473) #11	ENSAPEG00000011352	plppr3a (ENSAPEG00000011319)	palm1b (ENSAPEG00000011307)	ptbp1a (ENSAPEG00000011259)	efna2a (ENSAPEG00000011243)	snap23.1 (ENSAPEG00000011125)	sptb (ENSAPEG00000010931)	ENSAPEG00000010810
Spiny chromis	MODERN SPECIES	52		ENSAPOG00000010862	pak2a (ENSAPOG00000010829)	HLTF (ENSAPOG00000010761)	gyg1a (ENSAPOG00000010729)	pls1 (ENSAPOG00000010675)	ATR (ENSAPOG00000010592)	ENSAPOG00000010462	ENSAPOG00000010341	STAG1 (ENSAPOG00000010332)	pccb (ENSAPOG00000010220)	msl2b (ENSAPOG00000010151)	tnfsf10 (ENSAPOG00000010142) #24	nceh1a (ENSAPOG00000010131) #25	PPP2R3A (ENSAPOG00000010113)	fndc3ba (ENSAPOG00000010056) #22	ENSAPOG00000009909	ghsra (ENSAPOG00000009890) #23	pld1a (ENSAPOG00000009872) #20	tnika (ENSAPOG00000009802) #19	slc2a2 (ENSAPOG00000009652) #18	ENSAPOG00000009645 ##17	slc7a14a (ENSAPOG00000009612) #14	cldn11a (ENSAPOG00000009572) #11	ENSAPOG00000009549	plppr3a (ENSAPOG00000009479)	palm1b (ENSAPOG00000009441)	ptbp1a (ENSAPOG00000009431)	efna2a (ENSAPOG00000009374)	snap23.1 (ENSAPOG00000009328)	sptb (ENSAPOG00000009237)
Bicolor damselfish	MODERN SPECIES	417		ENSSPAG00000003061	pak2a (ENSSPAG00000003001)	ENSSPAG00000002948	gyg1a (ENSSPAG00000002924)	pls1 (ENSSPAG00000002886)	ATR (ENSSPAG00000002734)	ENSSPAG00000002710	ENSSPAG00000002699	STAG1 (ENSSPAG00000002534)	pccb (ENSSPAG00000002464)	MSL2 (ENSSPAG00000002456)	tnfsf10 (ENSSPAG00000002447) #24	nceh1a (ENSSPAG00000002431) #25	PPP2R3A (ENSSPAG00000002330)	fndc3ba (ENSSPAG00000002201) #22	ghsra (ENSSPAG00000002167) #23	pld1a (ENSSPAG00000002121) #20	tnika (ENSSPAG00000001951) #19	ENSSPAG00000001868	slc2a2 (ENSSPAG00000001849) #18	ENSSPAG00000001834 ##17	slc7a14a (ENSSPAG00000001808) #14	cldn11a (ENSSPAG00000001792) #11
Percomorphaceae_C	ANCESTRAL SPECIES	12	ENSGT00940000155528.t.d.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00970000198213	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT01010000223088	ENSGT00950000183196.B.e #19	ENSGT00940000163015	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a
Eupercaria	ANCESTRAL SPECIES	9	ENSGT01080000257344.a.a	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00970000198213	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT01010000223088	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908
Tetraodontidae	ANCESTRAL SPECIES	3	ENSGT00940000164644	ENSGT00940000155528.t.d.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT01010000223088	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	1	HLTF (ENSTNIG00000019430)	gyg1a (ENSTNIG00000019431)	pls1 (ENSTNIG00000019432)	ATR (ENSTNIG00000019433)	ENSTNIG00000019434	slc35g2a (ENSTNIG00000019435)	pak2a (ENSTNIG00000006866)	STAG1 (ENSTNIG00000006672)	pccb (ENSTNIG00000006671)	msl2b (ENSTNIG00000006670)	tnfsf10 (ENSTNIG00000006669) #24	nceh1a (ENSTNIG00000006668) #25	ENSTNIG00000000559	PPP2R3A (ENSTNIG00000006667)	ENSTNIG00000001560 #22	fndc3ba (ENSTNIG00000006666) #22	ghsra (ENSTNIG00000006665) #23	pld1a (ENSTNIG00000006664) #20	ENSTNIG00000004570	tnika (ENSTNIG00000006663) #19	slc2a2 (ENSTNIG00000006662) #18	ENSTNIG00000006661 ##17	slc7a14a (ENSTNIG00000006660) #14	cldn11a (ENSTNIG00000006659) #11	GRIN3B (ENSTNIG00000006658)	ENSTNIG00000006657	palm1b (ENSTNIG00000006656)	ENSTNIG00000019448	GUCY1A2 (ENSTNIG00000019696)	cwf19l2 (ENSTNIG00000003190)	ENSTNIG00000010284
Tetraodon	MODERN SPECIES	1	pak2a (ENSTNIG00000019429)	HLTF (ENSTNIG00000019430)	gyg1a (ENSTNIG00000019431)	pls1 (ENSTNIG00000019432)	ATR (ENSTNIG00000019433)	ENSTNIG00000019434	slc35g2a (ENSTNIG00000019435)	pak2a (ENSTNIG00000006866)	STAG1 (ENSTNIG00000006672)	pccb (ENSTNIG00000006671)	msl2b (ENSTNIG00000006670)	tnfsf10 (ENSTNIG00000006669) #24	nceh1a (ENSTNIG00000006668) #25	ENSTNIG00000000559	PPP2R3A (ENSTNIG00000006667)	ENSTNIG00000001560 #22	fndc3ba (ENSTNIG00000006666) #22	ghsra (ENSTNIG00000006665) #23	pld1a (ENSTNIG00000006664) #20	ENSTNIG00000004570	tnika (ENSTNIG00000006663) #19	slc2a2 (ENSTNIG00000006662) #18	ENSTNIG00000006661 ##17	slc7a14a (ENSTNIG00000006660) #14	cldn11a (ENSTNIG00000006659) #11	GRIN3B (ENSTNIG00000006658)	ENSTNIG00000006657	palm1b (ENSTNIG00000006656)	ENSTNIG00000019448	GUCY1A2 (ENSTNIG00000019696)	cwf19l2 (ENSTNIG00000003190)
Fugu	MODERN SPECIES	11	ENSTRUG00000032778	ENSTRUG00000002551	ENSTRUG00000029696	ENSTRUG00000027981	pak2a (ENSTRUG00000014381)	HLTF (ENSTRUG00000014279)	gyg1a (ENSTRUG00000014211)	ATR (ENSTRUG00000013854)	sh3glb1b (ENSTRUG00000024632)	ENSTRUG00000013802	STAG1 (ENSTRUG00000013563)	msl2b (ENSTRUG00000013427)	tnfsf10 (ENSTRUG00000013361) #24	nceh1a (ENSTRUG00000013315) #25	ENSTRUG00000023080	fndc3ba (ENSTRUG00000012979) #22	ghsra (ENSTRUG00000012927) #23	pld1a (ENSTRUG00000012776) #20	tnika (ENSTRUG00000012274) #19	slc2a2 (ENSTRUG00000012020) #18	ENSTRUG00000031737 ##17	slc7a14a (ENSTRUG00000011878) #14	cldn11a (ENSTRUG00000026784) #11	ENSTRUG00000011772	plppr3a (ENSTRUG00000011591)	palm1b (ENSTRUG00000031790)	ptbp1a (ENSTRUG00000011360)	efna2a (ENSTRUG00000027211)	snap23.1 (ENSTRUG00000022947)	ENSTRUG00000022799	ENSTRUG00000010200
Eupecaria_A	ANCESTRAL SPECIES	10	ENSGT00940000155528.t.d.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00970000198213	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
Ballan wrasse	MODERN SPECIES	572																fndc3ba (ENSLBEG00000021283) #22	ghsra (ENSLBEG00000021250) #23	pld1a (ENSLBEG00000021178) #20	tnika (ENSLBEG00000021058) #19	ENSLBEG00000021020 #19	slc2a2 (ENSLBEG00000020995) #18	ENSLBEG00000020975 ##17	ENSLBEG00000020963	slc7a14a (ENSLBEG00000020913) #14	cldn11a (ENSLBEG00000020885) #11
Eupecaria_B	ANCESTRAL SPECIES	11	ENSGT00940000161517.D.d.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00970000198213	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
Perciformes	ANCESTRAL SPECIES	12	ENSGT00940000161517.D.d.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00970000198213	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
Cottioidei	ANCESTRAL SPECIES	8	ENSGT00940000163478	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00970000198213	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
Lumpfish	MODERN SPECIES	14	tspan37 (ENSCLMG00005020493)	ENSCLMG00005020494	PAK2 (ENSCLMG00005020501)	ENSCLMG00005020618	gyg1a (ENSCLMG00005020658)	pls1 (ENSCLMG00005020666)	ATR (ENSCLMG00005021055)	ENSCLMG00005021585	ENSCLMG00005021586	ENSCLMG00005021587	STAG1 (ENSCLMG00005021621)	pccb (ENSCLMG00005022528)	msl2b (ENSCLMG00005022602)	tnfsf10 (ENSCLMG00005022603) #24	nceh1a (ENSCLMG00005022604) #25	fndc3ba (ENSCLMG00005022621) #22	ghsra (ENSCLMG00005022645) #23	pld1a (ENSCLMG00005022682) #20	tnika (ENSCLMG00005022870) #19	slc2a2 (ENSCLMG00005022896) #18	ENSCLMG00005009963 ##17	slc7a14a (ENSCLMG00005009964) #14	cldn11a (ENSCLMG00005009967) #11	GRIN3B (ENSCLMG00005009968)	plppr3a (ENSCLMG00005009970)	palm1b (ENSCLMG00005009980)	ptbp1a (ENSCLMG00005009984)	ENSCLMG00005010263	ENSCLMG00005010265	sptb (ENSCLMG00005010287)	ENSCLMG00005010557
Stickleback	MODERN SPECIES	15	ENSGACG00000010727	ENSGACG00000010728	pak2a (ENSGACG00000010731)	HLTF (ENSGACG00000010755)	gyg1a (ENSGACG00000010760)	pls1 (ENSGACG00000010777)	ATR (ENSGACG00000010787)	ENSGACG00000010829	ENSGACG00000010835	STAG1 (ENSGACG00000010839)	pccb (ENSGACG00000010847)	ENSGACG00000010889	tnfsf10 (ENSGACG00000010895) #24	nceh1a (ENSGACG00000010923) #25	PPP2R3A (ENSGACG00000010930)	fndc3ba (ENSGACG00000010937) #22	ghsra (ENSGACG00000010956) #23	pld1a (ENSGACG00000010958) #20	tnika (ENSGACG00000010967) #19	slc2a2 (ENSGACG00000010985) #18	ENSGACG00000010995 ##17	slc7a14a (ENSGACG00000011010) #14	cldn11a (ENSGACG00000011024) #11	GRIN3B (ENSGACG00000011030)	plppr3a (ENSGACG00000011037)	palm1b (ENSGACG00000011043)	ptbp1a (ENSGACG00000011048)	efna2a (ENSGACG00000011052)	snap23.1 (ENSGACG00000011055)	sptb (ENSGACG00000011100)	ENSGACG00000011121
Perciformes_a	ANCESTRAL SPECIES	10	ENSGT00940000161517.D.d.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00970000198213	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
Pike perch	MODERN SPECIES	24	ENSSLUG00000025507	pak2a (ENSSLUG00000025483)	HLTF (ENSSLUG00000025474)	gyg1a (ENSSLUG00000025469)	pls1 (ENSSLUG00000025274)	ATR (ENSSLUG00000025134)	ENSSLUG00000025105	ENSSLUG00000025102	ENSSLUG00000025100	STAG1 (ENSSLUG00000024843)	pccb (ENSSLUG00000024516)	MSL2 (ENSSLUG00000024481)	tnfsf10 (ENSSLUG00000024478) #24	nceh1a (ENSSLUG00000024475) #25	PPP2R3A (ENSSLUG00000024429)	fndc3ba (ENSSLUG00000023624) #22	ghsra (ENSSLUG00000023476) #23	pld1a (ENSSLUG00000020520) #20	tnika (ENSSLUG00000019443) #19	slc2a2 (ENSSLUG00000019025) #18	ENSSLUG00000019001 ##17	slc7a14a (ENSSLUG00000018998) #14	cldn11a (ENSSLUG00000018994) #11	GRIN3B (ENSSLUG00000018968)	plppr3a (ENSSLUG00000018916)	palm1b (ENSSLUG00000018905)	ptbp1a (ENSSLUG00000018728)	efna2a (ENSSLUG00000018696)	snap23.1 (ENSSLUG00000018690)	sptb (ENSSLUG00000017338)	ENSSLUG00000017216
Channel bull blenny	MODERN SPECIES	14	ENSCGOG00000024109	ENSCGOG00000024108 ##17	GADD45B (ENSCGOG00000024105)	gng7 (ENSCGOG00000024104)	diras1b (ENSCGOG00000024100)	zgc:101744 (ENSCGOG00000024099)	ATR (ENSCGOG00000024025)	ENSCGOG00000024009	ENSCGOG00000024007	STAG1 (ENSCGOG00000023170)	pccb (ENSCGOG00000022712)	MSL2 (ENSCGOG00000022696)	tnfsf10 (ENSCGOG00000022693) #24	nceh1a (ENSCGOG00000022689) #25	PPP2R3A (ENSCGOG00000022685)	fndc3ba (ENSCGOG00000021991) #22	ghsra (ENSCGOG00000021947) #23	pld1a (ENSCGOG00000021215) #20	tnika (ENSCGOG00000014659) #19	slc2a2 (ENSCGOG00000013641) #18	ENSCGOG00000013628 ##17	slc7a14a (ENSCGOG00000013619) #14	cldn11a (ENSCGOG00000013616) #11	GRIN3B (ENSCGOG00000013557)	plppr3a (ENSCGOG00000013548)	palm1b (ENSCGOG00000024295)	ptbp1a (ENSCGOG00000024140)	efna2a (ENSCGOG00000024092)	snap23.1 (ENSCGOG00000024088)	sptb (ENSCGOG00000023951)	ENSCGOG00000023920
Eupecaria_C	ANCESTRAL SPECIES	8	ENSGT00940000154954.ob	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00970000198213	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	25		ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00970000198213	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
European seabass	MODERN SPECIES	2	ENSDLAG00005031467	ENSDLAG00005031372	ENSDLAG00005031571	ENSDLAG00005013978	ENSDLAG00005014319	ENSDLAG00005014483	ENSDLAG00005015442	ENSDLAG00005016097	ENSDLAG00005030562	ENSDLAG00005032228	STAG1 (ENSDLAG00005016601)	pccb (ENSDLAG00005017241)	MSL2 (ENSDLAG00005031290)	nceh1a (ENSDLAG00005017649) #25	ENSDLAG00005026759	fndc3ba (ENSDLAG00005018165) #22	ghsra (ENSDLAG00005020147) #23	pld1a (ENSDLAG00005020293) #20	tnika (ENSDLAG00005022548) #19	slc2a2 (ENSDLAG00005023877) #18	ENSDLAG00005033879 ##17	slc7a14a (ENSDLAG00005024158) #14	cldn11a (ENSDLAG00005028364) #11	ENSDLAG00005024192	plppr3a (ENSDLAG00005024205)	palm1b (ENSDLAG00005028972)	ptbp1a (ENSDLAG00005000205)	efna2a (ENSDLAG00005027082)	ENSDLAG00005000416	ENSDLAG00005000786	ENSDLAG00005031840
Large yellow croaker	MODERN SPECIES	495	pak2a (ENSLCRG00005012546)	HLTF (ENSLCRG00005014023)	gyg1a (ENSLCRG00005014032)	pls1 (ENSLCRG00005014036)	ATR (ENSLCRG00005014460)	ENSLCRG00005014468	ENSLCRG00005014470	ENSLCRG00005014471	STAG1 (ENSLCRG00005014481)	ENSLCRG00005014895	pccb (ENSLCRG00005014912)	msl2b (ENSLCRG00005015747)	tnfsf10 (ENSLCRG00005015748) #24	nceh1a (ENSLCRG00005015749) #25	PPP2R3A (ENSLCRG00005015750)	fndc3ba (ENSLCRG00005015815) #22	ghsra (ENSLCRG00005018203) #23	pld1a (ENSLCRG00005018206) #20	tnika (ENSLCRG00005018590) #19	slc2a2 (ENSLCRG00005021774) #18	slc7a14a (ENSLCRG00005021946) #14	cldn11a (ENSLCRG00005021947) #11	ENSLCRG00005021948	plppr3a (ENSLCRG00005021950)	palm1b (ENSLCRG00005021951)	ptbp1a (ENSLCRG00005021957)	efna2a (ENSLCRG00005022256)	snap23.1 (ENSLCRG00005022257)	sptb (ENSLCRG00005022283)	ENSLCRG00005022757	ENSLCRG00005022759
Gilthead seabream	MODERN SPECIES	7	ENSSAUG00010009985	pak2a (ENSSAUG00010010006)	HLTF (ENSSAUG00010010671)	gyg1a (ENSSAUG00010010880)	pls1 (ENSSAUG00010010908)	ATR (ENSSAUG00010013818)	ENSSAUG00010013902	ENSSAUG00010013908	ENSSAUG00010013913	STAG1 (ENSSAUG00010014075)	pccb (ENSSAUG00010016995)	msl2b (ENSSAUG00010017233)	tnfsf10 (ENSSAUG00010017235) #24	nceh1a (ENSSAUG00010017236) #25	PPP2R3A (ENSSAUG00010017244)	fndc3ba (ENSSAUG00010017311) #22	ghsra (ENSSAUG00010019907) #23	pld1a (ENSSAUG00010020069) #20	tnika (ENSSAUG00010023133) #19	slc2a2 (ENSSAUG00010026511) #18	ENSSAUG00010026593 ##17	slc7a14a (ENSSAUG00010026594) #14	cldn11a (ENSSAUG00010026596) #11	ENSSAUG00010026598	plppr3a (ENSSAUG00010026601)	palm1b (ENSSAUG00010026603)	ptbp1a (ENSSAUG00010026605)	efna2a (ENSSAUG00010026610)	snap23.1 (ENSSAUG00010026613)	sptb (ENSSAUG00010026650)	ENSSAUG00010026836
Percomorphaceae_D	ANCESTRAL SPECIES	10	ENSGT01080000257344.a.b.a.b.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00970000198213	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000163015	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908
Anabantaria	ANCESTRAL SPECIES	10	ENSGT01080000257344.a.b.a.b.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00970000198213	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
Zig-zag eel	MODERN SPECIES	14	ENSMAMG00000002147	ENSMAMG00000025147	ENSMAMG00000002049	ENSMAMG00000002011	ENSMAMG00000001989	ENSMAMG00000001920	ENSMAMG00000001677	ENSMAMG00000001652	ENSMAMG00000001626	STAG1 (ENSMAMG00000001572)	ENSMAMG00000001513	MSL2 (ENSMAMG00000001502)	tnfsf10 (ENSMAMG00000001489) #24	nceh1a (ENSMAMG00000001479) #25	ENSMAMG00000001438	fndc3ba (ENSMAMG00000001307) #22	ghsra (ENSMAMG00000027883) #23	pld1a (ENSMAMG00000001136) #20	ENSMAMG00000026671	tnika (ENSMAMG00000000907) #19	slc2a2 (ENSMAMG00000000855) #18	ENSMAMG00000027393 ##17	slc7a14a (ENSMAMG00000000815) #14	cldn11a (ENSMAMG00000000796) #11	ENSMAMG00000000531	plppr3a (ENSMAMG00000000438)	palm1b (ENSMAMG00000025571)	ptbp1a (ENSMAMG00000000344)	efna2a (ENSMAMG00000000341)	ENSMAMG00000000335	ENSMAMG00000000310
Anabantoidei	ANCESTRAL SPECIES	9	ENSGT00940000155528.t.d.b	ENSGT00940000154954.ob	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155667.b.b	ENSGT00970000198213	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000164613
Siamese fighting fish	MODERN SPECIES	12	slc1a8b (ENSBSLG00000005679)	ENSBSLG00000006294	ENSBSLG00000006332	ENSBSLG00000006485	ENSBSLG00000006730	ENSBSLG00000007122	ENSBSLG00000007291	ENSBSLG00000007404	STAG1 (ENSBSLG00000007963)	pccb (ENSBSLG00000008862)	msl2b (ENSBSLG00000009679)	tnfsf10 (ENSBSLG00000009731) #24	nceh1a (ENSBSLG00000009919) #25	ENSBSLG00000009934	PPP2R3A (ENSBSLG00000009953)	fndc3ba (ENSBSLG00000010873) #22	ghsra (ENSBSLG00000013087) #23	pld1a (ENSBSLG00000013647) #20	tnika (ENSBSLG00000018058) #19	slc2a2 (ENSBSLG00000022439) #18	ENSBSLG00000023013 ##17	slc7a14a (ENSBSLG00000023018) #14	cldn11a (ENSBSLG00000023028) #11	GRIN3B (ENSBSLG00000023032)	plppr3a (ENSBSLG00000023051)	palm1b (ENSBSLG00000023061)	ptbp1a (ENSBSLG00000023186)	efna2a (ENSBSLG00000024120)	snap23.1 (ENSBSLG00000024126)	sptb (ENSBSLG00000024135)	ENSBSLG00000024412
Climbing perch	MODERN SPECIES	13	ENSATEG00000027887	ENSATEG00000007083	ENSATEG00000007034	ENSATEG00000007014	ENSATEG00000006984	ENSATEG00000006906	ENSATEG00000028667	ENSATEG00000025539	ENSATEG00000006833	STAG1 (ENSATEG00000006688)	ENSATEG00000006610	MSL2 (ENSATEG00000006602)	tnfsf10 (ENSATEG00000006564) #24	nceh1a (ENSATEG00000006322) #25	ENSATEG00000006299	fndc3ba (ENSATEG00000006271) #22	ghsra (ENSATEG00000006266) #23	pld1a (ENSATEG00000006144) #20	tnika (ENSATEG00000005980) #19	slc2a2 (ENSATEG00000005350) #18	ENSATEG00000028586 ##17	slc7a14a (ENSATEG00000005304) #14	cldn11a (ENSATEG00000005295) #11	ENSATEG00000005226	plppr3a (ENSATEG00000005185)	palm1b (ENSATEG00000028777)	ptbp1a (ENSATEG00000005117)	efna2a (ENSATEG00000029047)	ENSATEG00000005076	ENSATEG00000004936	ENSATEG00000025435
Carangaria	ANCESTRAL SPECIES	10	ENSGT01080000257344.a.b.a.a.a.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00970000198213	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000163015	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908
Carangaria_A	ANCESTRAL SPECIES	4	ENSGT00940000155528.t.d.b	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00970000198213	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000163015	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908
Seriola	ANCESTRAL SPECIES	3	ENSGT01030000234589.g.b	ENSGT00940000161517.D.d.b.f	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000163015	ENSGT00940000155708 #18	ENSGT00940000179636.a	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908
Greater amberjack	MODERN SPECIES	62	ENSSDUG00000012277	pak2a (ENSSDUG00000012163)	HLTF (ENSSDUG00000012132)	gyg1a (ENSSDUG00000012100)	pls1 (ENSSDUG00000012066)	ATR (ENSSDUG00000011966)	ENSSDUG00000011630	ENSSDUG00000011615	ENSSDUG00000011605	STAG1 (ENSSDUG00000011493)	pccb (ENSSDUG00000011437)	MSL2 (ENSSDUG00000011428)	tnfsf10 (ENSSDUG00000011411) #24	nceh1a (ENSSDUG00000011399) #25	PPP2R3A (ENSSDUG00000011386)	fndc3ba (ENSSDUG00000011272) #22	ghsra (ENSSDUG00000011039) #23	pld1a (ENSSDUG00000010920) #20	tnika (ENSSDUG00000010782) #19	ENSSDUG00000010695	slc2a2 (ENSSDUG00000010505) #18	ENSSDUG00000010490	slc7a14a (ENSSDUG00000010462) #14	cldn11a (ENSSDUG00000010446) #11	GRIN3B (ENSSDUG00000010400)	plppr3a (ENSSDUG00000010389)	palm1b (ENSSDUG00000010378)	ptbp1a (ENSSDUG00000010310)	ENSSDUG00000010302	efna2a (ENSSDUG00000010274)	snap23.1 (ENSSDUG00000010263)
Yellowtail amberjack	MODERN SPECIES	3025	pak2a (ENSSLDG00000024352)	ENSSLDG00000024346	HLTF (ENSSLDG00000024327)	gyg1a (ENSSLDG00000024264)	pls1 (ENSSLDG00000024235)	ENSSLDG00000024227	ATR (ENSSLDG00000024203)	ENSSLDG00000023972	ENSSLDG00000023946	STAG1 (ENSSLDG00000023877)	pccb (ENSSLDG00000023855)	MSL2 (ENSSLDG00000023853)	tnfsf10 (ENSSLDG00000023841) #24	nceh1a (ENSSLDG00000023836) #25	PPP2R3A (ENSSLDG00000023822)	fndc3ba (ENSSLDG00000023762) #22	ghsra (ENSSLDG00000023749) #23	pld1a (ENSSLDG00000023669) #20	tnika (ENSSLDG00000023567) #19	ENSSLDG00000023504	slc2a2 (ENSSLDG00000023475) #18	ENSSLDG00000023469
Barramundi perch	MODERN SPECIES	99	pak2a (ENSLCAG00010014398)	HLTF (ENSLCAG00010014386)	gyg1a (ENSLCAG00010014385)	ENSLCAG00010013793	ATR (ENSLCAG00010013702)	ENSLCAG00010013688	ENSLCAG00010013685	ENSLCAG00010013684	STAG1 (ENSLCAG00010013089)	pccb (ENSLCAG00010012857)	MSL2 (ENSLCAG00010012807)	tnfsf10 (ENSLCAG00010012803) #24	nceh1a (ENSLCAG00010012796) #25	ENSLCAG00010012791	PPP2R3A (ENSLCAG00010012784)	fndc3ba (ENSLCAG00010012365) #22	ghsra (ENSLCAG00010012242) #23	pld1a (ENSLCAG00010011374) #20	tnika (ENSLCAG00010008308) #19	slc2a2 (ENSLCAG00010007572) #18	ENSLCAG00010007559 ##17	slc7a14a (ENSLCAG00010007532) #14	cldn11a (ENSLCAG00010007516) #11	ENSLCAG00010007504	plppr3a (ENSLCAG00010007496)	palm1b (ENSLCAG00010007490)	ptbp1a (ENSLCAG00010007047)	efna2a (ENSLCAG00010006960)	snap23.1 (ENSLCAG00010006956)	sptb (ENSLCAG00010002867)	ENSLCAG00010002368
Pleuronectoidei	ANCESTRAL SPECIES	5	ENSGT00940000154954.ob	ENSGT00950000182988.a.a.a	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00970000198213	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b.j	ENSGT00940000157741	ENSGT00390000016814.b	ENSGT01070000253816.b.d #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.e #19	ENSGT00940000155708 #18	ENSGT00390000003738.b.d.b ##17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000182843.a.a.a.a	ENSGT00940000158908	ENSGT00940000173788
Turbot	MODERN SPECIES	8	ENSSMAG00000014763	tspan37 (ENSSMAG00000014751)	ENSSMAG00000014831	ENSSMAG00000014867	ENSSMAG00000014903	ENSSMAG00000014967	ENSSMAG00000015005	ENSSMAG00000031723	ENSSMAG00000015158	STAG1 (ENSSMAG00000015169)	ENSSMAG00000015372	msl2b (ENSSMAG00000015455)	tnfsf10 (ENSSMAG00000015464) #24	ENSSMAG00000022937 #25	ENSSMAG00000015503	fndc3ba (ENSSMAG00000015569) #22	GHSR (ENSSMAG00000015861) #23	pld1a (ENSSMAG00000015885) #20	tnika (ENSSMAG00000015992) #19	slc2a2 (ENSSMAG00000016223) #18	ENSSMAG00000016303 ##17	slc7a14a (ENSSMAG00000016348) #14	cldn11a (ENSSMAG00000031170) #11	ENSSMAG00000016475	plppr3a (ENSSMAG00000016488)	palm1b (ENSSMAG00000016538)	ptbp1a (ENSSMAG00000016551)	efna2a (ENSSMAG00000016619)	ENSSMAG00000016635	ENSSMAG00000016671	ENSSMAG00000016742
Tongue sole	MODERN SPECIES		slc5a6b (ENSCSEG00000003512)	ENSCSEG00000003500	ANKRD66 (ENSCSEG00000003509)	ENSCSEG00000003495	vsnl1b (ENSCSEG00000003493)	SCML4 (ENSCSEG00000003477)	afg1la (ENSCSEG00000003469)	ENSCSEG00000003466	ENSCSEG00000003462	STAG1 (ENSCSEG00000003450)	pccb (ENSCSEG00000003424)	MSL2 (ENSCSEG00000003416)	tnfsf10 (ENSCSEG00000003412) #24	nceh1a (ENSCSEG00000003410) #25	PPP2R3A (ENSCSEG00000003379)	fndc3ba (ENSCSEG00000003333) #22	ghsra (ENSCSEG00000003327) #23	pld1a (ENSCSEG00000003315) #20	tnika (ENSCSEG00000003288) #19	slc2a2 (ENSCSEG00000003278) #18	ENSCSEG00000003272 ##17	actc2 (ENSCSEG00000003263)	ENSCSEG00000003261	stxbp6 (ENSCSEG00000003256)	fermt2 (ENSCSEG00000003226)	DDHD1 (ENSCSEG00000003208)	bmp4 (ENSCSEG00000003196)	lbh (ENSCSEG00000003194)	lclat1 (ENSCSEG00000003184)	ypel5 (ENSCSEG00000003183)	ppp1cb (ENSCSEG00000003172)
Cod	MODERN SPECIES	18	atg9a (ENSGMOG00000010871)	ENSGMOG00000010836	ENSGMOG00000012833	ENSGMOG00000012840	ENSGMOG00000012852	ENSGMOG00000012859	ENSGMOG00000012865	ENSGMOG00000012899	ENSGMOG00000032856	STAG1 (ENSGMOG00000012908)	ENSGMOG00000012930	MSL2 (ENSGMOG00000012945)	tnfsf10 (ENSGMOG00000024676) #24	ENSGMOG00000028609	ENSGMOG00000012965	fndc3ba (ENSGMOG00000012986) #22	ghsra (ENSGMOG00000013007) #23	pld1a (ENSGMOG00000013012) #20	ENSGMOG00000033140	tnika (ENSGMOG00000013040) #19	ENSGMOG00000035266	ENSGMOG00000004702	ENSGMOG00000003201	ENSGMOG00000010820	ENSGMOG00000010805	rpl13a (ENSGMOG00000010791)	atp5if1b (ENSGMOG00000025825)	zmpste24 (ENSGMOG00000010767)	ENSGMOG00000024833	znf593 (ENSGMOG00000010720)	selenon (ENSGMOG00000010703)
Protacanthopterygii	ANCESTRAL SPECIES	13						ENSGT00950000182988.a.a.a	ENSGT00940000154674.q.a	ENSGT00950000183097.a.b	ENSGT00940000155714	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00940000156699.j #25	ENSGT00940000154659.b.e.a	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00940000154954.ob	ENSGT00940000155528.t.d.b	ENSGT00940000164644	ENSGT01080000257344.a.a.a.a.b	ENSGT01080000257344.a.a.b	ENSGT01030000234589.g.b	ENSGT00940000161517.D.b	ENSGT00940000167061	ENSGT00940000159915.b	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b.a.b.a	ENSGT00940000175916	ENSGT00390000018319.a.b.b.b.a.a
Northern pike	MODERN SPECIES	21	plppr3a (ENSELUG00000006711)	GRIN3B (ENSELUG00000006801)	cldn11a (ENSELUG00000001325) #11	slc7a14a (ENSELUG00000006859) #14	slc2a2 (ENSELUG00000006900) #18	tnika (ENSELUG00000006980) #19	gyg1a (ENSELUG00000007021)	pak2a (ENSELUG00000007078)	pls1 (ENSELUG00000007125)	ENSELUG00000007262	ENSELUG00000007284	STAG1 (ENSELUG00000007397)	pccb (ENSELUG00000007466)	nceh1a (ENSELUG00000007507) #25	PPP2R3A (ENSELUG00000007643)	fndc3ba (ENSELUG00000007765) #22	ghsra (ENSELUG00000007817) #23	pld1a (ENSELUG00000007947) #20	tspan37 (ENSELUG00000007993)	ELAVL1 (ENSELUG00000008024)	slc1a8b (ENSELUG00000008056)	ENSELUG00000025615	ENSELUG00000028163	ENSELUG00000034688	ENSELUG00000027418	ENSELUG00000033250	ENSELUG00000025039	ENSELUG00000030882	ENSELUG00000034056	ENSELUG00000030899	ENSELUG00000008088
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000157005.g #22
Huchen	DUPLICATION
Huchen	MODERN SPECIES	8808																ENSHHUG00000014581 #22
Huchen	MODERN SPECIES	11556																ENSHHUG00000017039 #22
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	30		ENSGT00950000182988.a.a.a	ENSGT00940000154674.q.a.e.b	ENSGT00950000183196.B.e.f.a #19	ENSGT00940000154674.q.a.e.a	ENSGT00950000183097.a.b	ENSGT00940000155714.n.a.a.a	ENSGT00970000197448	ENSGT00940000155714.m	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741	ENSGT00940000156699.j.e #25	ENSGT00940000154659.b.e.a	ENSGT00940000157005.h.a #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b.c.a.a #20	ENSGT00940000155015.g.b.c.a.b #20	ENSGT00940000154954.ob	ENSGT00940000155528.t.d.b.c	ENSGT00940000164644	ENSGT01080000257344.a.a.a.a.b	ENSGT00940000161517.D.b.a.a	ENSGT01080000257344.a.a.b.b	ENSGT01030000234589.g.b.mb	ENSGT01080000257344.a.b.a.b	ENSGT01080000257344.a.b.b.a.b.b	ENSGT00940000159915.a.a	ENSGT00990000204656.b	ENSGT00940000161517.D.b.b
Huchen	DUPLICATION
Huchen	MODERN SPECIES	3147																ENSHHUG00000004480 #22	GHSR (ENSHHUG00000004487) #23	pld1a (ENSHHUG00000004491) #20	tspan37 (ENSHHUG00000005011)	ELAVL1 (ENSHHUG00000005028)	slc1a8b (ENSHHUG00000005108)	ENSHHUG00000005205	ENSHHUG00000005216	ENSHHUG00000005226	ENSHHUG00000005232	ENSHHUG00000005238	zgc:101744 (ENSHHUG00000005255)	zgc:101744 (ENSHHUG00000005277)
Huchen	MODERN SPECIES	5551																fndc3ba (ENSHHUG00000009779) #22	GHSR (ENSHHUG00000009774) #23	ENSHHUG00000009761 #20
Salmoninae_a	ANCESTRAL SPECIES	49	ENSGT00950000183196.B.e.f.b.a #19	ENSGT00940000155708.f.a #18	ENSGT00950000183097.a.b	ENSGT00940000155714.n.a.b	ENSGT00940000155714.n.b	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741.h.a	ENSGT00940000156699.j.f #25	ENSGT00940000154659.b.e.a.c	ENSGT00940000157005.h.b.b #22	ENSGT00940000157741.h.b	ENSGT00940000156699.j.e #25	ENSGT00940000154659.b.e.a.d	ENSGT00940000157005.h.a #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b.c.b #20	ENSGT00940000155015.g.b.d #20	ENSGT00940000154954.ob	ENSGT00940000155528.t.d.b.c	ENSGT00940000164644.p	ENSGT01080000257344.a.a.b.b.b.b	ENSGT01080000257344.a.a.b.b.b.a.a	ENSGT00940000161517.D.b.a.a	ENSGT01080000257344.a.a.b.b.b.a.b.a	ENSGT01030000234589.g.b.lb.b.a	ENSGT00940000167061.e.a	ENSGT00940000159915.b	ENSGT01100000263497.E.a.b.k.b	ENSGT00940000163581.f.b.l.a
Salmo	ANCESTRAL SPECIES	48													ENSGT00940000157741.h.a	ENSGT00940000156699.j.f #25	ENSGT00940000154659.b.e.a.c	ENSGT00940000157005.h.a #22	ENSGT01100000263484.C.b.a.b.b #23	ENSGT00940000155015.g.b.d #20	ENSGT00940000154954.ob	ENSGT00940000155528.t.d.b.c	ENSGT00940000164644.p	ENSGT01080000257344.a.a.b.b.b.b	ENSGT01080000257344.a.a.b.b.b.a.a	ENSGT00940000161517.D.b.a.a	ENSGT01080000257344.a.a.b.b.b.a.b.a	ENSGT01030000234589.g.b.lb.b.a	ENSGT00940000167061.e.a	ENSGT00940000159915.b	ENSGT01100000263497.E.a.b.k.b	ENSGT00940000163581.f.b.l.a	ENSGT00390000018319.a.b.b.b.a.b.c
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	7	ENSSSAG00000101469	SLC2A2 (ENSSSAG00000006108) #18	tnika (ENSSSAG00000112433) #19	ENSSSAG00000075620	ENSSSAG00000060629	ENSSSAG00000064788	ENSSSAG00000064092	ENSSSAG00000055951	ENSSSAG00000098776	ENSSSAG00000093315	ENSSSAG00000107250	pccb (ENSSSAG00000015344)	nceh1a (ENSSSAG00000119070) #25	nceh1a (ENSSSAG00000015203) #25	ENSSSAG00000120665	fndc3ba (ENSSSAG00000008168) #22	ghsr (ENSSSAG00000116456) #23	pld1a (ENSSSAG00000006397) #20	tspan37 (ENSSSAG00000088201)	ENSSSAG00000092024	slc1a8b (ENSSSAG00000080059)	ENSSSAG00000080058	ENSSSAG00000080056	ENSSSAG00000080049	ENSSSAG00000120986	zgc:101744 (ENSSSAG00000075364)	diras1b (ENSSSAG00000089337)	ENSSSAG00000080039	ENSSSAG00000121721	ENSSSAG00000116278	ENSSSAG00000080026
Atlantic salmon	MODERN SPECIES	8	cldn11a (ENSSSAG00000092281) #11	slc7a14a (ENSSSAG00000058384) #14	slc2a2 (ENSSSAG00000060861) #18	tnika (ENSSSAG00000006960) #19	ENSSSAG00000087097	ENSSSAG00000082604	ENSSSAG00000086864	ENSSSAG00000075628	ENSSSAG00000075630	ENSSSAG00000108100	ENSSSAG00000086606	ENSSSAG00000105141	pccb (ENSSSAG00000075342)	nceh1a (ENSSSAG00000075337) #25	ENSSSAG00000014646	fndc3ba (ENSSSAG00000102502) #22	ENSSSAG00000008100 #23	pld1a (ENSSSAG00000075416) #20	ENSSSAG00000090982	slc1a8b (ENSSSAG00000015840)	ENSSSAG00000122066	ENSSSAG00000042799	ENSSSAG00000113740	ENSSSAG00000104806	ENSSSAG00000075379	ENSSSAG00000085365	ENSSSAG00000117374	zgc:101744 (ENSSSAG00000101692)	gng7 (ENSSSAG00000099909)	ENSSSAG00000054313	ENSSSAG00000094874
Oncorhynchus	ANCESTRAL SPECIES	70	ENSGT00950000182988.a.a.a.k.a	ENSGT00950000183097.a.b.i.a	ENSGT00940000155667.b.b.j	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b.g	ENSGT00950000182972.a.a.a.b.h	ENSGT00940000157741.h.a	ENSGT00940000156699.j.f #25	ENSGT00940000154659.b.e.a.c	ENSGT00940000157005.h.b.b #22	ENSGT01100000263484.C.b.a.b.d #23	ENSGT00940000155015.g.b.d #20	ENSGT00940000157741.h.b	ENSGT00940000156699.j.e #25	ENSGT00940000154659.b.e.b.a.b	ENSGT00940000157005.h.a #22	ENSGT01100000263484.C.b.a.b.c #23	ENSGT00940000155015.g.b.c.a.a.a #20	ENSGT00940000155015.g.b.c.a.b #20	ENSGT00940000154954.ob	ENSGT00940000155528.t.d.b.c	ENSGT00940000164644.p.b	ENSGT00940000164644.p.a	ENSGT01080000257344.a.a.b.b.b.b	ENSGT00940000161517.D.b.b	ENSGT00940000167061.e.a	ENSGT00940000159915.b.d	ENSGT01100000263497.E.a.b.k.b	ENSGT00940000163581.f.b.l.a	ENSGT00390000018319.a.b.b.b.a.b.c	ENSGT00940000159228.a.b.b
Rainbow trout	MODERN SPECIES	28	slc2a2 (ENSOMYG00000002245) #18	ENSOMYG00000002304	tnika (ENSOMYG00000002547) #19	ENSOMYG00000055234	ENSOMYG00000003482	ENSOMYG00000054919	ENSOMYG00000072672	ENSOMYG00000003684	ENSOMYG00000048066	ENSOMYG00000003736	ENSOMYG00000020718	ENSOMYG00000003786	ENSOMYG00000062745	pccb (ENSOMYG00000020894)	nceh1a (ENSOMYG00000020474) #25	fndc3ba (ENSOMYG00000052961) #22	GHS-R (ENSOMYG00000021076) #23	pld1a (ENSOMYG00000021089) #20	ENSOMYG00000021127	slc1a8b (ENSOMYG00000020617)	ENSOMYG00000056794	ENSOMYG00000020685	ENSOMYG00000075812	ENSOMYG00000060987	ENSOMYG00000020678	ENSOMYG00000020672	ENSOMYG00000020693	ENSOMYG00000004055	ENSOMYG00000068718	ENSOMYG00000069987	ENSOMYG00000004152
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000157005.h.b.a #22
Huchen	DUPLICATION
Huchen	MODERN SPECIES	3408														ENSHHUG00000002834	ENSHHUG00000002824	ENSHHUG00000002811 #22
Huchen	MODERN SPECIES	7746																ENSHHUG00000018264 #22
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000157005.h.b.b #22
Huchen	MODERN SPECIES	11111																ENSHHUG00000013218 #22
Salmoninae_a	ANCESTRAL SPECIES	49			ENSGT00950000182988.a.a.a	ENSGT00940000154674.q.a.e.a	ENSGT00950000183196.B.e.f.b.a #19	ENSGT00940000155708.f.a #18	ENSGT00950000183097.a.b	ENSGT00940000155714.n.a.b	ENSGT00940000155714.n.b	ENSGT00940000155667.b.b	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741.h.a	ENSGT00940000156699.j.f #25	ENSGT00940000154659.b.e.a.c	ENSGT00940000157005.h.b.b #22	ENSGT00940000157741.h.b	ENSGT00940000156699.j.e #25	ENSGT00940000154659.b.e.a.d	ENSGT00940000157005.h.a #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b.c.b #20	ENSGT00940000155015.g.b.d #20	ENSGT00940000154954.ob	ENSGT00940000155528.t.d.b.c	ENSGT00940000164644.p	ENSGT01080000257344.a.a.b.b.b.b	ENSGT01080000257344.a.a.b.b.b.a.a	ENSGT00940000161517.D.b.a.a	ENSGT01080000257344.a.a.b.b.b.a.b.a	ENSGT01030000234589.g.b.lb.b.a
Salmo	ANCESTRAL SPECIES	41	ENSGT00940000155714.n.b	ENSGT00950000183097.a.b.g	ENSGT00940000155708.e #18	ENSGT00950000183196.B.e.f.b.b.a #19	ENSGT00940000154674.q.a.e.a	ENSGT00950000182988.a.a.a.j	ENSGT00950000182988.a.a.a.i.a	ENSGT00950000183097.a.b.h	ENSGT00940000155714.n.a.a.b	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.a.a	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.a.b	ENSGT00940000153249.b.d.a.d	ENSGT00950000182972.a.a.a.b	ENSGT00940000157741.h.b	ENSGT00940000156699.j.e #25	ENSGT00940000157005.h.b.b #22	ENSGT01100000263484.C.b.a.b.a #23	ENSGT00940000155015.g.b.c.b.a #20	ENSGT00940000155528.t.d.b.d	ENSGT00940000164644.o	ENSGT00940000161517.D.b.b	ENSGT01080000257344.a.a.b.a	ENSGT01030000234589.g.b.lb.a	ENSGT00940000161517.D.b.a.b.a	ENSGT00990000204656.a.b.a	ENSGT01080000257344.a.b.a.b	ENSGT00940000161517.D.b.a.b.b	ENSGT00940000167061.e.b	ENSGT01100000263497.E.a.b.k.a	ENSGT00940000163581.f.b.l.b	ENSGT00940000163581.f.b.k.b
River trout	MODERN SPECIES	214						ENSSTUG00000032557	gyg1a (ENSSTUG00000032579)	ENSSTUG00000032588	ENSSTUG00000032614	ENSSTUG00000033177	ENSSTUG00000033187	ENSSTUG00000033198	STAG1 (ENSSTUG00000033243)	pccb (ENSSTUG00000035471)	nceh1a (ENSSTUG00000036293) #25	ENSSTUG00000036304 #22
Oncorhynchus	ANCESTRAL SPECIES	70	ENSGT00940000155708.f.a #18	ENSGT00950000183196.B.e.f.b.a #19	ENSGT00940000154674.q.a.e.a	ENSGT00950000182988.a.a.a.l	ENSGT00950000183097.a.b.j	ENSGT00940000154674.q.a.e.b	ENSGT00950000182988.a.a.a.k.a	ENSGT00950000183097.a.b.i.a	ENSGT00940000155667.b.b.j	ENSGT00940000153249.b.d.a	ENSGT00950000182972.a.a.a.b.g	ENSGT00950000182972.a.a.a.b.h	ENSGT00940000157741.h.a	ENSGT00940000156699.j.f #25	ENSGT00940000154659.b.e.a.c	ENSGT00940000157005.h.b.b #22	ENSGT01100000263484.C.b.a.b.d #23	ENSGT00940000155015.g.b.d #20	ENSGT00940000157741.h.b	ENSGT00940000156699.j.e #25	ENSGT00940000154659.b.e.b.a.b	ENSGT00940000157005.h.a #22	ENSGT01100000263484.C.b.a.b.c #23	ENSGT00940000155015.g.b.c.a.a.a #20	ENSGT00940000155015.g.b.c.a.b #20	ENSGT00940000154954.ob	ENSGT00940000155528.t.d.b.c	ENSGT00940000164644.p.b	ENSGT00940000164644.p.a	ENSGT01080000257344.a.a.b.b.b.b	ENSGT00940000161517.D.b.b
Rainbow trout	MODERN SPECIES	9	ENSOMYG00000055324	slc2a2 (ENSOMYG00000051374) #18	tnika (ENSOMYG00000063166) #19	ENSOMYG00000002765	ENSOMYG00000052728	ENSOMYG00000019552	ENSOMYG00000019634	ENSOMYG00000019832	ENSOMYG00000058380	ENSOMYG00000051137	ENSOMYG00000069815	ENSOMYG00000020783	pccb (ENSOMYG00000019871)	nceh1a (ENSOMYG00000021003) #25	ENSOMYG00000020495	ENSOMYG00000021061 #22	ghs-r (ENSOMYG00000020530) #23	ENSOMYG00000069941	pld1a (ENSOMYG00000020513) #20	ENSOMYG00000020542	ENSOMYG00000020556	slc1a8b (ENSOMYG00000021152)	ENSOMYG00000055854	ENSOMYG00000020665	ENSOMYG00000021171	ENSOMYG00000077499	zgc:101744 (ENSOMYG00000021190)	ENSOMYG00000021197	ENSOMYG00000054032	ENSOMYG00000021227	ENSOMYG00000051390
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00940000157005.h.b.b #22
Coho salmon	MODERN SPECIES	25	ENSOKIG00005027544	FBLN2 (ENSOKIG00005027579)	hdac11 (ENSOKIG00005027857)	IQSEC1 (ENSOKIG00005027932)	ENSOKIG00005027979	ENSOKIG00005028031	rab43 (ENSOKIG00005028040)	zgc:77375 (ENSOKIG00005028061)	ENSOKIG00005028124	mkrn2 (ENSOKIG00005028154)	ENSOKIG00005028181	MKRN2OS (ENSOKIG00005000038)	TSEN2 (ENSOKIG00005000064)	ENSOKIG00005000081	PPARG (ENSOKIG00005000160)	ENSOKIG00005000199 #22
Otomorpha	ANCESTRAL SPECIES	88							ENSGT00940000158089.b	ENSGT00940000156942	ENSGT00950000182997.a.a	ENSGT00940000157755.r	ENSGT00950000182972.a.a.a.b.k.b	ENSGT00390000016814.c	ENSGT01070000253816.b #24	ENSGT00940000156699.i #25	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.a.a #23	ENSGT00940000155015.g.a #20	ENSGT00950000183196.B.g #19	ENSGT00390000003738.a.b.a #17	ENSGT00940000154509 #16	ENSGT00940000155893.a ##14	ENSGT00890000139496.b #11	ENSGT00940000154964.z #7	ENSGT00730000111293	ENSGT00940000161601	ENSGT00940000156456	ENSGT00940000162716	ENSGT00510000046981.a.b	ENSGT00510000046981.b.a	ENSGT00390000011600
Clupeiformes	ANCESTRAL SPECIES	66	ENSGT00500000044852.a.a.b	ENSGT00940000164667.b.a.b	ENSGT00390000001319.e	ENSGT00940000154242.b.g	ENSGT00940000155121	ENSGT00940000159123.a	ENSGT00390000003289	ENSGT00940000157341.g	ENSGT00550000074817.v	ENSGT00450000040296	ENSGT00940000153607.a.a	ENSGT00390000016814.d	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00390000016029 #21	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.h #19	ENSGT00940000155708 #18	ENSGT00390000003738.a.b.b #17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b.e	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00390000018077	ENSGT00950000183128.B	ENSGT00940000158429
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	14	ENSCHAG00000026199	ENSCHAG00000002574	ENSCHAG00000002615	ENSCHAG00000002739	vps37c (ENSCHAG00000002752)	GPR141 (ENSCHAG00000002788)	si:dkey-94e7.2 (ENSCHAG00000002855)	SEC61G (ENSCHAG00000002884)	ENSCHAG00000002925	tcea1 (ENSCHAG00000002960)	oprk1 (ENSCHAG00000003196)	ENSCHAG00000003217	nceh1a (ENSCHAG00000003230) #25	PPP2R3A (ENSCHAG00000003343)	TMEM212 (ENSCHAG00000005816) #21	fndc3ba (ENSCHAG00000006008) #22	ghsra (ENSCHAG00000009926) #23	pld1a (ENSCHAG00000010029) #20	tnika (ENSCHAG00000012708) #19	slc2a2 (ENSCHAG00000018816) #18	eif5a2 (ENSCHAG00000020048) #17	slc7a14a (ENSCHAG00000020079) #14	cldn11a (ENSCHAG00000020101) #11	GRIN3B (ENSCHAG00000020110)	plppr3a (ENSCHAG00000020235)	palm1b (ENSCHAG00000020266)	ptbp1a (ENSCHAG00000020314)	efna2a (ENSCHAG00000021575)	ASB17 (ENSCHAG00000021589)	rabggtb (ENSCHAG00000021692)	acadm (ENSCHAG00000021727)
Atlantic herring	MODERN SPECIES	8												vipr2 (ENSCHAG00000024695)	zmynd11 (ENSCHAG00000024539)	DIP2C (ENSCHAG00000023650)	larp4b (ENSCHAG00000023580)	FNDC3B (ENSCHAG00000023326) #22	GHSR (ENSCHAG00000023319) #23	ENSCHAG00000019971 #20	TNIK (ENSCHAG00000015013) #19	eif5a (ENSCHAG00000014895) #17	rpl22l1 (ENSCHAG00000014802) #16	ENSCHAG00000014740 ##14	cldn11b (ENSCHAG00000014706) #11	ENSCHAG00000014635 #7	skilb (ENSCHAG00000014599) #9	ENSCHAG00000014557	ENSCHAG00000014513	LRRC34 (ENSCHAG00000014506)	mynn (ENSCHAG00000014496)	ENSCHAG00000014480	apodb (ENSCHAG00000014447)
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	14	ctnnd2b (ENSDCDG00000004895)	GPR141 (ENSDCDG00000013342)	si:dkey-94e7.2 (ENSDCDG00000013346)	SEC61G (ENSDCDG00000013349)	ENSDCDG00000013355	tcea1 (ENSDCDG00000013367)	rgs20 (ENSDCDG00000013382)	atp6v1h (ENSDCDG00000013405)	oprk1 (ENSDCDG00000013493)	ENSDCDG00000013505	bag1 (ENSDCDG00000013520)	myl12.2 (ENSDCDG00000013532)	msl2a (ENSDCDG00000013539)	nceh1a (ENSDCDG00000013546) #25	PPP2R3A (ENSDCDG00000013636)	fndc3ba (ENSDCDG00000018053) #22	ENSDCDG00000023024	ghsra (ENSDCDG00000023028) #23	pld1a (ENSDCDG00000023115) #20	tnika (ENSDCDG00000027113) #19	slc2a2 (ENSDCDG00000032301) #18	eif5a2 (ENSDCDG00000032303) #17	slc7a14a (ENSDCDG00000032305) #14	cldn11a (ENSDCDG00000032309) #11	GRIN3B (ENSDCDG00000032311)	plppr3a (ENSDCDG00000032315)	palm1b (ENSDCDG00000032316)	ptbp1a (ENSDCDG00000032355)	efna2a (ENSDCDG00000033047)	rabggtb (ENSDCDG00000033051)	acadm (ENSDCDG00000033069)
Denticle herring	MODERN SPECIES	11	cpb1 (ENSDCDG00000026164)	gyg1b (ENSDCDG00000026167)	GPT (ENSDCDG00000026198)	foxh1 (ENSDCDG00000027701)	oplah (ENSDCDG00000027712)	shrprbck1r (ENSDCDG00000027765)	maf1b (ENSDCDG00000027777)	vipr2 (ENSDCDG00000027796)	zmynd11 (ENSDCDG00000027835)	DIP2C (ENSDCDG00000028293)	larp4b (ENSDCDG00000034031)	STAG1 (ENSDCDG00000034082)	msl2b (ENSDCDG00000034482)	tnfsf10 (ENSDCDG00000034484) #24	nceh1b.1 (ENSDCDG00000034487) #25	FNDC3B (ENSDCDG00000034520) #22	GHSR (ENSDCDG00000034779) #23	PLD1 (ENSDCDG00000034832) #20	TNIK (ENSDCDG00000035293) #19	eif5a (ENSDCDG00000035600) #17	rpl22l1 (ENSDCDG00000035603) #16	ENSDCDG00000035608 ##14	cldn11b (ENSDCDG00000035610) #11	ENSDCDG00000035618 #7	zgc:194621 (ENSDCDG00000035622)	skilb (ENSDCDG00000035623) #9	ENSDCDG00000035624	ENSDCDG00000035628	CLDN11 (ENSDCDG00000035630) #11	apodb (ENSDCDG00000035632)	otos (ENSDCDG00000035635)
Otophysi	ANCESTRAL SPECIES	5	ENSGT00940000157050.i.a	ENSGT00940000164804.a	ENSGT00940000160620	ENSGT00940000164492.a.a	ENSGT00940000158959.b.b	ENSGT00940000160269.e	ENSGT01050000244888.b.a.c.b.f	ENSGT00940000154674.q.a	ENSGT00910000144305	ENSGT00940000156601.r	ENSGT00950000182972.a.a.a.b.k.a	ENSGT00940000157741	ENSGT00390000016814.d	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.a.b #23	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.h #19	ENSGT00940000163015	ENSGT00940000155708 #18	ENSGT00390000003738.a.b.b #17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00390000018077
Characiphysae	ANCESTRAL SPECIES	152				ENSGT00950000183022.a.a.a	ENSGT00390000008756	ENSGT00390000010450	ENSGT00940000164492.a.a	ENSGT00940000158959.b.b	ENSGT01050000244888.b.a.c.b.f	ENSGT00940000154674.q.a	ENSGT00910000144305	ENSGT00940000157741	ENSGT00390000016814.d	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.h #19	ENSGT00940000163015	ENSGT00940000155708 #18	ENSGT00390000003738.a.b.b #17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00390000018077	ENSGT00950000183128.B
Channel catfish	MODERN SPECIES	15	mak (ENSIPUG00000018069)	gcm2 (ENSIPUG00000018059)	ENSIPUG00000018049	elovl2 (ENSIPUG00000018019)	Gnal (ENSIPUG00000017980)	mppe1 (ENSIPUG00000017960)	VPS13B (ENSIPUG00000017891)	ENSIPUG00000017863	ENSIPUG00000017858	cavin1b (ENSIPUG00000017837)	Atp6v0a1 (ENSIPUG00000017748)	ENSIPUG00000017685	ENSIPUG00000017662	ENSIPUG00000017657	ENSIPUG00000017645	FNDC3B (ENSIPUG00000017521) #22	ghsrb (ENSIPUG00000017489) #23	ENSIPUG00000017481	Pld1 (ENSIPUG00000017378) #20	tnika (ENSIPUG00000017325) #19	eif5a2 (ENSIPUG00000017299) #17	rpl22l1 (ENSIPUG00000017248) #16	ENSIPUG00000017234 ##14	CLDN11 (ENSIPUG00000017218) #11	phc3 (ENSIPUG00000017146)	skilb (ENSIPUG00000017127) #9	ENSIPUG00000017113	ENSIPUG00000017097	mynn (ENSIPUG00000017077)	apodb (ENSIPUG00000017048)	otos (ENSIPUG00000017038)
Characiphysae_b	ANCESTRAL SPECIES	51	ENSGT01090000260003.a.b.b.a.a.b.a.b.b	ENSGT01090000260003.a.b.b.a.a.b.a.a	ENSGT00950000183071.a.a.b.c.d	ENSGT00940000165265.g.b	ENSGT01030000235347	ENSGT01000000214711	ENSGT01080000257487	ENSGT00940000158089.b	ENSGT00940000156942	ENSGT00950000182997.a.a	ENSGT00940000157755.r	ENSGT00950000182972.a.a.a.b.k.b	ENSGT00390000016814.c	ENSGT01070000253816.b #24	ENSGT00940000156699.i #25	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.a.a #23	ENSGT00940000155015.g.a #20	ENSGT00950000183196.B.g #19	ENSGT00390000003738.a.b.a #17	ENSGT00940000154509 #16	ENSGT00940000155893.a ##14	ENSGT00890000139496.b #11	ENSGT00940000162952.d.b.b.b	ENSGT00730000111293	ENSGT00940000156456	ENSGT00940000162716	ENSGT00510000046981.b.a	ENSGT00390000011600	ENSGT00390000000076	ENSGT00500000045505.b
Characoidei	ANCESTRAL SPECIES	14		ENSGT01090000260003.a.b.b.a.a.b.a.a	ENSGT00950000183071.a.a.b.c.d	ENSGT00940000165265.g.b	ENSGT01030000235347	ENSGT01000000214711	ENSGT01080000257487	ENSGT00940000158089.b	ENSGT00940000156942	ENSGT00950000182997.a.a	ENSGT00940000157755.r	ENSGT00950000182972.a.a.a.b.k.b	ENSGT00390000016814.c	ENSGT01070000253816.b #24	ENSGT00940000156699.i #25	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.a.a #23	ENSGT00940000155015.g.a #20	ENSGT00950000183196.B.g #19	ENSGT00390000003738.a.b.a #17	ENSGT00940000154509 #16	ENSGT00940000155893.a ##14	ENSGT00890000139496.b #11	ENSGT00940000162952.d.b.b.b	ENSGT00730000111293	ENSGT00940000156456	ENSGT00940000162716	ENSGT00510000046981.b.a	ENSGT00390000011600	ENSGT00390000000076	ENSGT00500000045505.b
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	1429																fndc3ba (ENSPNAG00000004510) #22
Red-bellied piranha	MODERN SPECIES	169	hs6st1b (ENSPNAG00000029271)	ek1 (ENSPNAG00000029263)	ENSPNAG00000029245	ENSPNAG00000029206	ENSPNAG00000029197	ccl34b.4 (ENSPNAG00000029191)	ccl34b.4 (ENSPNAG00000029187)	vipr2 (ENSPNAG00000029183)	zmynd11 (ENSPNAG00000029173)	DIP2C (ENSPNAG00000029108)	larp4b (ENSPNAG00000028956)	STAG1 (ENSPNAG00000028857)	msl2b (ENSPNAG00000005822)	tnfsf10 (ENSPNAG00000028641) #24	nceh1b.1 (ENSPNAG00000006280) #25	FNDC3B (ENSPNAG00000028615) #22	GHSR (ENSPNAG00000006279) #23
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES		HLTF (ENSAMXG00000006359)	ENSAMXG00000036626	pccb (ENSAMXG00000006365)	msl2a (ENSAMXG00000032232)	nceh1a (ENSAMXG00000038667) #25	PPP2R3A (ENSAMXG00000006377)	si:dkey-10f21.4 (ENSAMXG00000033409)	cnn3b (ENSAMXG00000038181)	ENSAMXG00000006396	EPHA4 (ENSAMXG00000006406)	pxylp1 (ENSAMXG00000038336)	SLC25A36 (ENSAMXG00000033723)	spsb4b (ENSAMXG00000010781)	CLSTN2 (ENSAMXG00000010806)	ENSAMXG00000039784	fndc3ba (ENSAMXG00000006332) #22	ENSAMXG00000029621 #23	pld1a (ENSAMXG00000006319) #20	tnika (ENSAMXG00000006314) #19	slc2a2 (ENSAMXG00000006312) #18	eif5a2 (ENSAMXG00000043662) #17	slc7a14a (ENSAMXG00000006310) #14	cldn11a (ENSAMXG00000040638) #11	GRIN3B (ENSAMXG00000006305)	ENSAMXG00000030466	ENSAMXG00000038294	plppr3a (ENSAMXG00000043542)	palm1b (ENSAMXG00000006297)	ptbp1a (ENSAMXG00000006285)	efna2a (ENSAMXG00000037011)	ENSAMXG00000030859
Mexicana tetra	MODERN SPECIES	18	ENSAMXG00000038393	ENSAMXG00000036667	ENSAMXG00000034228	ENSAMXG00000034487	ENSAMXG00000041711	ccl34b.4 (ENSAMXG00000042149)	ENSAMXG00000034731	vipr2 (ENSAMXG00000005208)	zmynd11 (ENSAMXG00000005242)	DIP2C (ENSAMXG00000005269)	larp4b (ENSAMXG00000003335)	STAG1 (ENSAMXG00000003373)	msl2b (ENSAMXG00000042396)	tnfsf10 (ENSAMXG00000042620) #24	nceh1b.1 (ENSAMXG00000040435) #25	FNDC3B (ENSAMXG00000003573) #22	GHSR (ENSAMXG00000003721) #23	ENSAMXG00000003737 #20	TNIK (ENSAMXG00000003837) #19	eif5a (ENSAMXG00000039778) #17	rpl22l1 (ENSAMXG00000004066) #16	ENSAMXG00000004078 ##14	cldn11b (ENSAMXG00000029411) #11	ENSAMXG00000004100	ENSAMXG00000004117	zgc:194621 (ENSAMXG00000004186)	skilb (ENSAMXG00000004207) #9	ENSAMXG00000004256	ENSAMXG00000008211	mynn (ENSAMXG00000008196)	apodb (ENSAMXG00000008186)
Electric eel	DUPLICATION
Electric eel	MODERN SPECIES	124					bloc1s3 (ENSEEEG00000004770)	ifi30 (ENSEEEG00000004771)	rab3aa (ENSEEEG00000004772)	gyg1a (ENSEEEG00000004777)	HLTF (ENSEEEG00000004781)	slc35g2a (ENSEEEG00000004794)	STAG1 (ENSEEEG00000004796)	pccb (ENSEEEG00000004847)	msl2a (ENSEEEG00000004893)	nceh1a (ENSEEEG00000004896) #25	PPP2R3A (ENSEEEG00000004948)	fndc3ba (ENSEEEG00000005113) #22	ghsra (ENSEEEG00000005116) #23	pld1a (ENSEEEG00000005265) #20	ENSEEEG00000007101 #19	ENSEEEG00000007103	slc2a2 (ENSEEEG00000007105) #18	eif5a2 (ENSEEEG00000007107) #17	slc7a14a (ENSEEEG00000007108) #14	cldn11a (ENSEEEG00000007109) #11	GRIN3B (ENSEEEG00000007112)	plppr3a (ENSEEEG00000007132)	palm1b (ENSEEEG00000007134)	ptbp1a (ENSEEEG00000007160)	efna2a (ENSEEEG00000007666)	ENSEEEG00000007667	rabggtb (ENSEEEG00000007672)
Electric eel	MODERN SPECIES	116								vipr2 (ENSEEEG00000016349)	zmynd11 (ENSEEEG00000016363)	DIP2C (ENSEEEG00000016434)	larp4b (ENSEEEG00000016440)	STAG1 (ENSEEEG00000016666)	msl2b (ENSEEEG00000019911)	tnfsf10 (ENSEEEG00000019912) #24	nceh1b.1 (ENSEEEG00000019913) #25	FNDC3B (ENSEEEG00000019920) #22	GHSR (ENSEEEG00000020014) #23	ENSEEEG00000020015 #20	TNIK (ENSEEEG00000020090) #19	eif5a (ENSEEEG00000022053) #17	rpl22l1 (ENSEEEG00000022057) #16	ENSEEEG00000022062 ##14	cldn11b (ENSEEEG00000022073) #11	ENSEEEG00000022076	ENSEEEG00000022078	skilb (ENSEEEG00000022080) #9	LRRC34 (ENSEEEG00000022083)	mynn (ENSEEEG00000022084)	apodb (ENSEEEG00000022085)	otos (ENSEEEG00000022091)	cops9 (ENSEEEG00000022092)
Cyprinoidei	ANCESTRAL SPECIES	63	ENSGT00940000160620	ENSGT00940000164492.a.a	ENSGT00940000158959.b.b	ENSGT00940000160269.e	ENSGT01050000244888.b.a.c.b.f	ENSGT00940000154674.q.a	ENSGT00910000144305	ENSGT00940000156601.r	ENSGT00940000156601.s	ENSGT00940000153249.b.d.b	ENSGT00950000182972.a.a.a.b.k.a	ENSGT00940000157741	ENSGT00390000016814.d	ENSGT00940000156699.j #25	ENSGT00940000154659.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.h #19	ENSGT00940000155708 #18	ENSGT00390000003738.a.b.b #17	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00940000161021.a.b	ENSGT00940000160280.d	ENSGT00940000160580.b	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160040.B.a.a	ENSGT00950000183128.B	ENSGT00940000158429	ENSGT00940000159923
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	8	ENSGT00940000157050.i.a.a	ENSGT00940000164804.a.b	ENSGT00940000160620.b	ENSGT00940000164492.a.a.a	ENSGT00940000158959.b.b.b	ENSGT00940000160269.e	ENSGT01050000244888.b.a.c.b.f.a	ENSGT00940000154674.q.a.b	ENSGT00910000144305.b	ENSGT00940000156601.r.b	ENSGT00950000182972.a.a.a.b.k.a.b	ENSGT00940000157741.j	ENSGT00390000016814.d.a	ENSGT00940000156699.j.b #25	ENSGT00940000154659.b.c	ENSGT00940000157005.s.a #22	ENSGT01100000263484.C.b.a.a.b.b #23	ENSGT00940000155015.g.b.a #20	ENSGT00950000183196.B.h.b #19	ENSGT00940000155708.c #18	ENSGT00390000003738.a.b.b #17	ENSGT00940000155893.b.a #14	ENSGT00890000139496.a.b #11	ENSGT00940000161021.a.b.a	ENSGT00940000160280.d.b	ENSGT00940000160580.b.c	ENSGT01050000244924.a.a.b.a.b.a	ENSGT00940000160040.B.a.a.a	ENSGT00950000183128.B.a.b	ENSGT00940000158429.s	ENSGT00940000159923.f
Goldfish	MODERN SPECIES	19	mpv17l2 (ENSCARG00000010348)	ENSCARG00000010370	rab3aa (ENSCARG00000010418)	ENSCARG00000010429	AGTR1 (ENSCARG00000010437)	gyg1a (ENSCARG00000010441)	HLTF (ENSCARG00000010479)	ENSCARG00000010555	SLC35G2 (ENSCARG00000010566)	ENSCARG00000010581	STAG1 (ENSCARG00000010614)	pccb (ENSCARG00000011015)	msl2a (ENSCARG00000011968)	nceh1a (ENSCARG00000011972) #25	PPP2R3A (ENSCARG00000012019)	fndc3ba (ENSCARG00000012914) #22	GHS-R (ENSCARG00000015800) #23	pld1a (ENSCARG00000016161) #20	tnika (ENSCARG00000024912) #19	slc2a2 (ENSCARG00000035482) #18	eif5a2 (ENSCARG00000035613) #17	slc7a14a (ENSCARG00000035656) #14	cldn11a (ENSCARG00000035702) #11	GRIN3B (ENSCARG00000035728)	plppr3a (ENSCARG00000035755)	ENSCARG00000035780	palm1b (ENSCARG00000035841)	ptbp1a (ENSCARG00000035952)	efna2a (ENSCARG00000037045)	rabggtb (ENSCARG00000037093)	acadm (ENSCARG00000037358)
Cyprininae_a	ANCESTRAL SPECIES	4	ENSGT00940000157050.i.a.a	ENSGT00940000164804.a.b	ENSGT00940000160620.b	ENSGT00940000164492.a.a.a	ENSGT00940000158959.b.b.b	ENSGT00940000160269.e	ENSGT01050000244888.b.a.c.b.f.a	ENSGT00940000154674.q.a.b	ENSGT00910000144305.b	ENSGT00940000156601.r.b	ENSGT00950000182972.a.a.a.b.k.a.b	ENSGT00940000157741.j	ENSGT00390000016814.d.a	ENSGT00940000156699.j.b #25	ENSGT00940000154659.b.c	ENSGT00940000157005.s.a #22	ENSGT01100000263484.C.b.a.a.b.b #23	ENSGT00940000155015.g.b.a #20	ENSGT00950000183196.B.h.b #19	ENSGT00940000155708.c #18	ENSGT00390000003738.a.b.b #17	ENSGT00940000155893.b.a #14	ENSGT00890000139496.a.b #11	ENSGT00940000161021.a.b.a	ENSGT00940000160280.d.b	ENSGT00940000160580.b.c	ENSGT01050000244924.a.a.b.a.b.a	ENSGT00940000160040.B.a.a.a	ENSGT00940000158429.s	ENSGT00940000159923.f	ENSGT00390000012433.b.c.b.a.a
Common carp reference	MODERN SPECIES	29	ENSCCRG00000073827	pik3r2 (ENSCCRG00000052805)	ifi30 (ENSCCRG00000075596)	ENSCCRG00000034749	rab3aa (ENSCCRG00000034792)	ENSCCRG00000058841	HLTF (ENSCCRG00000034796)	ENSCCRG00000034797	ENSCCRG00000034710	slc35g2a (ENSCCRG00000074652)	STAG1 (ENSCCRG00000010781)	pccb (ENSCCRG00000066917)	msl2a (ENSCCRG00000076254)	nceh1a (ENSCCRG00000075085) #25	ENSCCRG00000039700	fndc3ba (ENSCCRG00000009418) #22	ghsra (ENSCCRG00000009349) #23	pld1a (ENSCCRG00000033262) #20	tnika (ENSCCRG00000048594) #19	slc2a2 (ENSCCRG00000059072) #18	eif5a2 (ENSCCRG00000068933) #17	slc7a14a (ENSCCRG00000078778) #14	cldn11a (ENSCCRG00000068150) #11	ENSCCRG00000019790	plppr3a (ENSCCRG00000000521)	palm1b (ENSCCRG00000057164)	ptbp1a (ENSCCRG00000000560)	efna2a (ENSCCRG00000018045)	rabggtb (ENSCCRG00000018033)	acadm (ENSCCRG00000057773)	hectd3 (ENSCCRG00000016833)
Golden-line barbel	MODERN SPECIES	4	pik3r2 (ENSSGRG00000049544)	ifi30 (ENSSGRG00000049543)	mpv17l2 (ENSSGRG00000049541)	ENSSGRG00000049418	rab3aa (ENSSGRG00000049390)	ENSSGRG00000049388	AGTR1 (ENSSGRG00000049387)	gyg1a (ENSSGRG00000049386)	HLTF (ENSSGRG00000049216)	ENSSGRG00000049212	STAG1 (ENSSGRG00000049192)	pccb (ENSSGRG00000048930)	msl2a (ENSSGRG00000048927)	nceh1a (ENSSGRG00000048926) #25	PPP2R3A (ENSSGRG00000048696)	fndc3ba (ENSSGRG00000047946) #22	ghsra (ENSSGRG00000047928) #23	pld1a (ENSSGRG00000047369) #20	osgep (ENSSGRG00000047352)	tnika (ENSSGRG00000046654) #19	slc2a2 (ENSSGRG00000046631) #18	eif5a2 (ENSSGRG00000046630) #17	slc7a14a (ENSSGRG00000046627) #14	cldn11a (ENSSGRG00000046626) #11	GRIN3B (ENSSGRG00000046624)	plppr3a (ENSSGRG00000046620)	palm1b (ENSSGRG00000046619)	ptbp1a (ENSSGRG00000044906)	efna2a (ENSSGRG00000044885)	acadm (ENSSGRG00000044730)	ENSSGRG00000044724
Cyprininae	ANCESTRAL SPECIES	1128																ENSGT00940000157005.s.b #22	ENSGT01100000263484.C.b.a.a.b.a #23	ENSGT00940000155015.g.b.b #20
Cyprininae_a	ANCESTRAL SPECIES	193	ENSGT00940000157050.i.a.b	ENSGT00940000164804.a.a	ENSGT00940000160620.a	ENSGT00940000164492.a.a.b	ENSGT00940000158959.b.b.a	ENSGT01050000244888.b.a.c.b.f.b	ENSGT00940000154674.q.a.a	ENSGT00910000144305.a	ENSGT00940000156601.r.a	ENSGT00940000153249.b.d.b.t	ENSGT00950000182972.a.a.a.b.k.a.a	ENSGT00940000157741.i	ENSGT00390000016814.d.b	ENSGT00940000156699.j.a #25	ENSGT00940000154659.b.d	ENSGT00940000157005.s.b #22	ENSGT01100000263484.C.b.a.a.b.a #23	ENSGT00940000155015.g.b.b #20	ENSGT00950000183196.B.h.a #19	ENSGT00940000155708.d #18	ENSGT00940000155893.b.b #14	ENSGT00890000139496.a.a #11	ENSGT00940000161021.a.b.b	ENSGT00940000160280.d.a	ENSGT00940000160580.b.d	ENSGT01050000244924.a.a.b.a.b.b	ENSGT00940000160040.B.a.a.b	ENSGT00950000183128.B.b	ENSGT00940000158429.t	ENSGT00940000159923.e	ENSGT00980000198608.f
Common carp reference	MODERN SPECIES	21	MAST3 (ENSCCRG00000064186)	pik3r2 (ENSCCRG00000015337)	mpv17l2 (ENSCCRG00000018993)	ENSCCRG00000034816	rab3aa (ENSCCRG00000034805)	AGTR1 (ENSCCRG00000054418)	gyg1a (ENSCCRG00000074283)	HLTF (ENSCCRG00000034727)	ENSCCRG00000039750	slc35g2a (ENSCCRG00000073012)	STAG1 (ENSCCRG00000015032)	pccb (ENSCCRG00000068139)	msl2a (ENSCCRG00000016838)	nceh1a (ENSCCRG00000079863) #25	ENSCCRG00000051403	fndc3ba (ENSCCRG00000006819) #22	ghsra (ENSCCRG00000073726) #23	pld1a (ENSCCRG00000014815) #20	tnika (ENSCCRG00000052378) #19	slc2a2 (ENSCCRG00000048384) #18	ENSCCRG00000080979	ENSCCRG00000058049	slc7a14a (ENSCCRG00000007396) #14	cldn11a (ENSCCRG00000007392) #11	ENSCCRG00000000508	plppr3a (ENSCCRG00000019783)	palm1b (ENSCCRG00000019778)	ptbp1a (ENSCCRG00000018069)	efna2a (ENSCCRG00000057809)	rabggtb (ENSCCRG00000001200)	acadm (ENSCCRG00000068209)
Golden-line barbel	MODERN SPECIES	401	ifi30 (ENSSGRG00000037326)	mpv17l2 (ENSSGRG00000037322)	ENSSGRG00000037321	ENSSGRG00000037317	rab3aa (ENSSGRG00000037304)	AGTR1 (ENSSGRG00000037302)	gyg1a (ENSSGRG00000037300)	ENSSGRG00000037296	ENSSGRG00000037295	SLC35G2 (ENSSGRG00000037294)	STAG1 (ENSSGRG00000035896)	pccb (ENSSGRG00000035290)	msl2a (ENSSGRG00000035278)	nceh1a (ENSSGRG00000035277) #25	PPP2R3A (ENSSGRG00000034955)	fndc3ba (ENSSGRG00000033316) #22	ghsra (ENSSGRG00000033273) #23	pld1a (ENSSGRG00000032807) #20	tnika (ENSSGRG00000023354) #19	slc2a2 (ENSSGRG00000023220) #18	eif5a2 (ENSSGRG00000023219) #17	slc7a14a (ENSSGRG00000023218) #14	cldn11a (ENSSGRG00000023216) #11
Goldfish	MODERN SPECIES	614																fndc3ba (ENSCARG00000059175) #22	GHS-R (ENSCARG00000061730) #23	pld1a (ENSCARG00000061900) #20
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	241											ENSGT00950000182972.a.a.a.b.k.b.b	ENSGT00390000016814.c.b	ENSGT01070000253816.b.a #24	ENSGT00940000156699.i.b.a #25	ENSGT00940000156699.i.a #25	ENSGT00940000157005.t.a #22	ENSGT01100000263484.C.b.a.a.a.b #23	ENSGT00940000155015.g.a.h #20	ENSGT00950000183196.B.g.b #19	ENSGT00390000003738.a.b.a.c #17	ENSGT00940000154509.cd #16	ENSGT00940000155893.a.b ##14	ENSGT00890000139496.b.c #11	ENSGT00940000162952.d.b.b.b.b	ENSGT00390000013820.h.b	ENSGT00940000158435.eb.a #9	ENSGT00730000111293.a	ENSGT00940000156456.f	ENSGT00940000162716.a	ENSGT00940000162716.b.a	ENSGT00510000046981.b.a.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	16															pcyt1ba (ENSCARG00000005728)	FNDC3B (ENSCARG00000005751) #22	GHSR (ENSCARG00000005777) #23	ENSCARG00000005954 #20	acaa1 (ENSCARG00000009221)	ENSCARG00000009236	plcd1a (ENSCARG00000009275)	VILL (ENSCARG00000009501)	ctdspla (ENSCARG00000009872)	gars1 (ENSCARG00000009917)	hhatlb (ENSCARG00000009970)	ZBTB47 (ENSCARG00000010225)	ENSCARG00000010236	SEC22C (ENSCARG00000010299)	vipr1b (ENSCARG00000010318)	ENSCARG00000010413	ENSCARG00000010484
Goldfish	MODERN SPECIES	16	ENSCARG00000068406	pcyt1ba (ENSCARG00000068411)	ENSCARG00000068446	slc51a (ENSCARG00000068542)	zdhhc20b (ENSCARG00000068597)	nup58 (ENSCARG00000068729)	mtmr6 (ENSCARG00000068867)	amer2 (ENSCARG00000069136)	PHLDB2 (ENSCARG00000069151)	si:ch73-264p11.1 (ENSCARG00000069214)	cip2a (ENSCARG00000069227)	ENSCARG00000069259	ENSCARG00000069263	ENSCARG00000069272	ENSCARG00000069277	FNDC3B (ENSCARG00000069290) #22	GHS-R (ENSCARG00000069347) #23	ENSCARG00000069438 #20	ek1 (ENSCARG00000069618)	hs6st1b (ENSCARG00000069623)	bcl2a (ENSCARG00000069624)	cox4i1l (ENSCARG00000069626)	prkag2a (ENSCARG00000069633)	sh3glb1a (ENSCARG00000069670)	nrros (ENSCARG00000069680)	fbxo45 (ENSCARG00000069684)	ENSCARG00000069690	ENSCARG00000069699	VAV3 (ENSCARG00000069760)	NTNG1 (ENSCARG00000069835)	prmt6 (ENSCARG00000069837)
Cyprininae_a	ANCESTRAL SPECIES	71	ENSGT00950000183790.a	ENSGT01000000214711.e.b.a.b	ENSGT01080000257487.h.b	ENSGT01000000214711.e.b.b	ENSGT01080000257487.g	ENSGT01000000214711.e.a	ENSGT00940000158089.b.b	ENSGT00940000156942.i	ENSGT00950000182997.a.a.k	ENSGT00940000157755.r.h	ENSGT00950000182972.a.a.a.b.k.b.b	ENSGT00390000016814.c.b	ENSGT01070000253816.b.a #24	ENSGT00940000156699.i.b.a #25	ENSGT00940000156699.i.a #25	ENSGT00940000157005.t.a #22	ENSGT01100000263484.C.b.a.a.a.b #23	ENSGT00940000155015.g.a.h #20	ENSGT00950000183196.B.g.b #19	ENSGT00390000003738.a.b.a.c #17	ENSGT00940000154509.cd #16	ENSGT00940000155893.a.b ##14	ENSGT00890000139496.b.c #11	ENSGT00940000162952.d.b.b.b.b	ENSGT00390000013820.h.b	ENSGT00940000158435.eb.a #9	ENSGT00730000111293.a	ENSGT00940000156456.f	ENSGT00940000162716.a	ENSGT00940000162716.b.a	ENSGT00510000046981.b.a.b
Common carp reference	MODERN SPECIES	40	ENSCCRG00000014465	ENSCCRG00000078297	ENSCCRG00000014457	ENSCCRG00000071180	ccl34b.1 (ENSCCRG00000069269)	ENSCCRG00000014429	ENSCCRG00000056095	vipr2 (ENSCCRG00000015255)	zmynd11 (ENSCCRG00000055862)	DIP2C (ENSCCRG00000017367)	larp4b (ENSCCRG00000067359)	ENSCCRG00000050823	msl2b (ENSCCRG00000062150)	tnfsf10 (ENSCCRG00000068827) #24	ENSCCRG00000065212 #25	FNDC3B (ENSCCRG00000035303) #22	ENSCCRG00000015456 #23	ENSCCRG00000015379 #20	TNIK (ENSCCRG00000071510) #19	eif5a (ENSCCRG00000064602) #17	rpl22l1 (ENSCCRG00000036635) #16	ENSCCRG00000026650 ##14	ENSCCRG00000001075	zgc:194621 (ENSCCRG00000074066)	ENSCCRG00000056807	ENSCCRG00000080782	mynn (ENSCCRG00000026608)	apodb (ENSCCRG00000026600)	otos (ENSCCRG00000026595)	and1 (ENSCCRG00000026576)	adipoqa (ENSCCRG00000062953)
Golden-line barbel	MODERN SPECIES	84	ENSSGRG00000019833	ENSSGRG00000019832	ENSSGRG00000019830	ENSSGRG00000019827	ccl34b.4 (ENSSGRG00000019824)	ENSSGRG00000019821	vipr2 (ENSSGRG00000019815)	zmynd11 (ENSSGRG00000018587)	DIP2C (ENSSGRG00000012876)	larp4b (ENSSGRG00000012754)	STAG1 (ENSSGRG00000010007)	msl2b (ENSSGRG00000009984)	tnfsf10 (ENSSGRG00000009983) #24	nceh1b.1 (ENSSGRG00000009972) #25	NCEH1 (ENSSGRG00000009971) #25	FNDC3B (ENSSGRG00000009641) #22	GHSR (ENSSGRG00000009640) #23	ENSSGRG00000008950 #20	TNIK (ENSSGRG00000001624) #19	eif5a (ENSSGRG00000001413) #17	rpl22l1 (ENSSGRG00000001379) #16	ENSSGRG00000001305 ##14	cldn11b (ENSSGRG00000001291) #11	ENSSGRG00000001279	zgc:194621 (ENSSGRG00000001267)	skilb (ENSSGRG00000001259) #9	ENSSGRG00000001234	mynn (ENSSGRG00000001184)	apodb (ENSSGRG00000001151)	ENSSGRG00000001145	otos (ENSSGRG00000001137)
Cyprininae	ANCESTRAL SPECIES	32	ENSGT00940000165265.g.b.d	ENSGT00990000208723.a	ENSGT01030000235347.b.a	ENSGT01030000235347.b.b.a	ENSGT00950000183790.b	ENSGT01000000214711.f.a.b	ENSGT01080000257487.h.a	ENSGT00940000158089.b.a	ENSGT00940000156942.j	ENSGT00950000182997.a.a.l	ENSGT00940000157755.r.g	ENSGT00950000182972.a.a.a.b.k.b.a	ENSGT00390000016814.c.a	ENSGT01070000253816.b.b #24	ENSGT00940000156699.i.b.b #25	ENSGT00940000157005.t.b #22	ENSGT01100000263484.C.b.a.a.a.a #23	ENSGT00940000155015.g.a.g #20	ENSGT00950000183196.B.g.a #19	ENSGT00390000003738.a.b.a.d #17	ENSGT00940000154509.dd #16	ENSGT00940000155893.a.a ##14	ENSGT00890000139496.b.d #11	ENSGT00940000162952.d.b.b.b.a	ENSGT00390000013820.h.a	ENSGT00940000158435.eb.b #9	ENSGT00730000111293.b	ENSGT00940000156456.e	ENSGT00940000162716.b.b
Goldfish	MODERN SPECIES	43	ENSCARG00000019541	ek1 (ENSCARG00000019549)	ENSCARG00000019594	ENSCARG00000019597	ENSCARG00000019604	ENSCARG00000019609	ENSCARG00000019614	ENSCARG00000019642	vipr2 (ENSCARG00000019701)	zmynd11 (ENSCARG00000020629)	DIP2C (ENSCARG00000021660)	larp4b (ENSCARG00000022393)	ENSCARG00000022475	msl2b (ENSCARG00000023985)	tnfsf10 (ENSCARG00000023989) #24	FNDC3B (ENSCARG00000024032) #22	GHSR (ENSCARG00000024268) #23	ENSCARG00000024425 #20	TNIK (ENSCARG00000029039) #19	eif5a (ENSCARG00000040259) #17	rpl22l1 (ENSCARG00000040297) #16	ENSCARG00000040353 ##14	cldn11b (ENSCARG00000040405) #11	ENSCARG00000040418	ENSCARG00000040450	skilb (ENSCARG00000040486) #9	ENSCARG00000040534	LRRC34 (ENSCARG00000040558)	mynn (ENSCARG00000040641)	apodb (ENSCARG00000040658)	otos (ENSCARG00000040674)
Cyprininae_a	ANCESTRAL SPECIES	87	ENSGT00940000165265.g.b.d	ENSGT00990000208723.a	ENSGT01030000235347.b.a	ENSGT01030000235347.b.b.a	ENSGT00950000183790.b	ENSGT01000000214711.f.a.b	ENSGT01080000257487.h.a	ENSGT00940000158089.b.a	ENSGT00940000156942.j	ENSGT00950000182997.a.a.l	ENSGT00940000157755.r.g	ENSGT00950000182972.a.a.a.b.k.b.a	ENSGT00390000016814.c.a	ENSGT01070000253816.b.b #24	ENSGT00940000156699.i.b.b #25	ENSGT00940000157005.t.b #22	ENSGT01100000263484.C.b.a.a.a.a #23	ENSGT00940000155015.g.a.g #20	ENSGT00950000183196.B.g.a #19	ENSGT00390000003738.a.b.a.d #17	ENSGT00940000154509.dd #16	ENSGT00940000155893.a.a ##14	ENSGT00890000139496.b.d #11	ENSGT00940000162952.d.b.b.b.a	ENSGT00390000013820.h.a	ENSGT00940000158435.eb.b #9	ENSGT00730000111293.b	ENSGT00940000156456.e	ENSGT00940000162716.b.b	ENSGT00510000046981.b.a.a	ENSGT00390000011600.c
Common carp reference	MODERN SPECIES	14	ENSCCRG00000072091	ENSCCRG00000036652	ENSCCRG00000065210	ENSCCRG00000042645	ENSCCRG00000008293	ENSCCRG00000063589	ENSCCRG00000078435	vipr2 (ENSCCRG00000076552)	zmynd11 (ENSCCRG00000015330)	DIP2C (ENSCCRG00000052122)	larp4b (ENSCCRG00000050726)	ENSCCRG00000052152	msl2b (ENSCCRG00000059869)	tnfsf10 (ENSCCRG00000075876) #24	nceh1b.1 (ENSCCRG00000072251) #25	FNDC3B (ENSCCRG00000015397) #22	ENSCCRG00000065858 #23	ENSCCRG00000044078 #20	ENSCCRG00000010582	ENSCCRG00000026823 #19	ENSCCRG00000026643	eif5a (ENSCCRG00000063418) #17	rpl22l1 (ENSCCRG00000026662) #16	ENSCCRG00000061851 ##14	cldn11b (ENSCCRG00000026644) #11	zgc:194621 (ENSCCRG00000026639)	skilb (ENSCCRG00000001093) #9	ENSCCRG00000034883	ENSCCRG00000034869	mynn (ENSCCRG00000034860)	apodb (ENSCCRG00000036372)
Golden-line barbel	MODERN SPECIES	125	hs6st1b (ENSSGRG00000047914)	ek1 (ENSSGRG00000047902)	ENSSGRG00000047901	ENSSGRG00000047899	ENSSGRG00000047898	ENSSGRG00000047897	vipr2 (ENSSGRG00000047871)	zmynd11 (ENSSGRG00000047054)	DIP2C (ENSSGRG00000043179)	larp4b (ENSSGRG00000043068)	ENSSGRG00000038445	msl2b (ENSSGRG00000038362)	tnfsf10 (ENSSGRG00000038360) #24	nceh1b.1 (ENSSGRG00000038358) #25	NCEH1 (ENSSGRG00000038357) #25	FNDC3B (ENSSGRG00000038346) #22	GHSR (ENSSGRG00000038334) #23	ENSSGRG00000037806 #20	TNIK (ENSSGRG00000036727) #19	eif5a (ENSSGRG00000036684) #17	rpl22l1 (ENSSGRG00000036662) #16	ENSSGRG00000036656 ##14	cldn11b (ENSSGRG00000036652) #11	ENSSGRG00000036651	zgc:194621 (ENSSGRG00000036650)	skilb (ENSSGRG00000036649) #9	ENSSGRG00000036648	LRRC34 (ENSSGRG00000036646)	ENSSGRG00000036645	apodb (ENSSGRG00000036644)	otos (ENSSGRG00000036643)
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	11	ENSDARG00000094684	ENSDARG00000112172	ENSDARG00000092491	ENSDARG00000097081	AGTR1 (ENSDARG00000018616)	gyg1a (ENSDARG00000011934)	HLTF (ENSDARG00000026053)	ENSDARG00000074262	slc35g2a (ENSDARG00000056262)	STAG1 (ENSDARG00000061205)	pccb (ENSDARG00000038910)	msl2a (ENSDARG00000038909)	nceh1a (ENSDARG00000020427) #25	ENSDARG00000094083	PPP2R3A (ENSDARG00000077722)	fndc3ba (ENSDARG00000078179) #22	ghsra (ENSDARG00000056230) #23	pld1a (ENSDARG00000056228) #20	tnika (ENSDARG00000056218) #19	slc2a2 (ENSDARG00000056196) #18	eif5a2 (ENSDARG00000056186) #17	slc7a14a (ENSDARG00000010816) #14	cldn11a (ENSDARG00000020031) #11	ENSDARG00000005364	plppr3a (ENSDARG00000010144)	palm1b (ENSDARG00000007818)	ptbp1a (ENSDARG00000019362)	efna2a (ENSDARG00000031372)	rabggtb (ENSDARG00000068587)	acadm (ENSDARG00000038900)	hectd3 (ENSDARG00000038905)
Zebrafish	MODERN SPECIES	16	ENSDARG00000100520	ENSDARG00000099782	ENSDARG00000093570	ccl34b.4 (ENSDARG00000094002)	ENSDARG00000032993	ccl34b.1 (ENSDARG00000093608)	vipr2 (ENSDARG00000012353)	zmynd11 (ENSDARG00000057249)	DIP2C (ENSDARG00000062154)	larp4b (ENSDARG00000062146)	STAG1 (ENSDARG00000062137)	msl2b (ENSDARG00000039430)	tnfsf10 (ENSDARG00000057241) #24	nceh1b.1 (ENSDARG00000062087) #25	NCEH1 (ENSDARG00000115549) #25	FNDC3B (ENSDARG00000062023) #22	GHSR (ENSDARG00000057117) #23	ENSDARG00000057125 #20	ENSDARG00000116503	ENSDARG00000009031	eif5a (ENSDARG00000017235) #17	rpl22l1 (ENSDARG00000010244) #16	ENSDARG00000079231 ##14	cldn11b (ENSDARG00000030723) #11	zgc:194621 (ENSDARG00000074696)	ENSDARG00000079167	skilb (ENSDARG00000022904) #9	ENSDARG00000057392	ENSDARG00000062235	mynn (ENSDARG00000007271)	apodb (ENSDARG00000057437)
Osteoglossiformes	ANCESTRAL SPECIES	157	ENSGT00940000154200.B.p	ENSGT00940000160269.d	ENSGT00940000182355	ENSGT01050000244888.b.a.c.b	ENSGT00940000154674.q.a	ENSGT00910000144305	ENSGT00940000156929	ENSGT00940000156601.p	ENSGT00940000153249.b.d.b	ENSGT00950000182972.a.a.a.b.m	ENSGT00940000157741	ENSGT00390000016814	ENSGT01070000253816.b.e #24	ENSGT00940000156699.j #25	ENSGT00940000154659.b.b	ENSGT00940000157005 #22	ENSGT01100000263484.C.b.a.b #23	ENSGT00940000155015.g.b #20	ENSGT00950000183196.B.i #19	ENSGT00940000155708 #18	ENSGT00390000003738.a.b.a #17	ENSGT00940000154509 #16	ENSGT00940000155893.b #14	ENSGT00890000139496.a #11	ENSGT00890000139496.b #11	ENSGT00940000154964.z #7	ENSGT00940000153497.E.e #8	ENSGT00940000153497.E.f #8	ENSGT00940000158435 #9	ENSGT00730000111293
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	18	zic4 (ENSSFOG00015009983)	ZIC1 (ENSSFOG00015009971)	ENSSFOG00015031549	AGTR1 (ENSSFOG00015009966)	gyg1a (ENSSFOG00015009894)	HLTF (ENSSFOG00015009816)	bdh1 (ENSSFOG00015031023)	NCK1 (ENSSFOG00015009771)	slc35g2a (ENSSFOG00015028575)	ENSSFOG00015009648	pccb (ENSSFOG00015009544)	MSL2 (ENSSFOG00015009527)	TNFSF10 (ENSSFOG00015027159) #24	nceh1a (ENSSFOG00015033076) #25	PPP2R3A (ENSSFOG00015009424)	fndc3ba (ENSSFOG00015009292) #22	ghsra (ENSSFOG00015030756) #23	pld1a (ENSSFOG00015009068) #20	tnika (ENSSFOG00015008965) #19	slc2a2 (ENSSFOG00015008895) #18	EIF5A2 (ENSSFOG00015008874) #17	rpl22l1 (ENSSFOG00015008846) #16	slc7a14a (ENSSFOG00015008812) #14	cldn11a (ENSSFOG00015008806) #11	PHC3 (ENSSFOG00015008757) #7	prkci (ENSSFOG00015008673) #8	SKIL (ENSSFOG00015008637) #9	ATR (ENSSFOG00015008513)	ENSSFOG00015008414	ENSSFOG00015008388	fam168b (ENSSFOG00015030729)
Asian bonytongue	MODERN SPECIES	10	ENSSFOG00015028297	ENSSFOG00015028140	cyp4t8 (ENSSFOG00015006331)	uqcrc2b (ENSSFOG00015006371)	ENSSFOG00015006387	MAP3K15 (ENSSFOG00015006422)	ENSSFOG00015006510	zmynd11 (ENSSFOG00015006546)	ENSSFOG00015006618	ENSSFOG00015006832	ENSSFOG00015024688	msl2b (ENSSFOG00015006855)	tnfsf10 (ENSSFOG00015006871) #24	nceh1b.1 (ENSSFOG00015006891) #25	ENSSFOG00015007155	FNDC3B (ENSSFOG00015007525) #22	PLD1 (ENSSFOG00015007617) #20	TNIK (ENSSFOG00015007735) #19	EIF5A2 (ENSSFOG00015027484) #17	ENSSFOG00015007922 ##14	ENSSFOG00015007954 #7	prkci (ENSSFOG00015032857) #8	skilb (ENSSFOG00015029120) #9	ENSSFOG00015008027	ENSSFOG00015028837	ENSSFOG00015008059	apodb (ENSSFOG00015008080)	ENSSFOG00015008412	ENSSFOG00015008211	ENSSFOG00015008235	ENSSFOG00015008249
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	205	zic4 (ENSPKIG00000021631)	ZIC1 (ENSPKIG00000021609)	ENSPKIG00000021588	AGTR1 (ENSPKIG00000021582)	gyg1a (ENSPKIG00000021566)	HLTF (ENSPKIG00000021535)	bdh1 (ENSPKIG00000021518)	NCK1 (ENSPKIG00000021501)	slc35g2a (ENSPKIG00000021484)	STAG1 (ENSPKIG00000021392)	pccb (ENSPKIG00000021332)	MSL2 (ENSPKIG00000021313)	ENSPKIG00000021294 #24	nceh1a (ENSPKIG00000021276) #25	PPP2R3A (ENSPKIG00000021182)	fndc3ba (ENSPKIG00000021061) #22	GHSR (ENSPKIG00000021028) #23	pld1a (ENSPKIG00000020932) #20	tnika (ENSPKIG00000020782) #19	slc2a2 (ENSPKIG00000020732) #18	rpl22l1 (ENSPKIG00000020724) #16	slc7a14a (ENSPKIG00000020679) #14	cldn11a (ENSPKIG00000020606) #11	ENSPKIG00000020569	prkci (ENSPKIG00000020480) #8	ENSPKIG00000020445 #9	gpr160 (ENSPKIG00000020435)	nadkb (ENSPKIG00000020386)	sec62 (ENSPKIG00000020358)	samd7 (ENSPKIG00000020332)	apoda.1 (ENSPKIG00000020317)
P. kingsleyae	MODERN SPECIES	255	rcor3 (ENSPKIG00000019270)	kcnh1b (ENSPKIG00000019234)	ENSPKIG00000019217	ENSPKIG00000019191	ENSPKIG00000019169	ENSPKIG00000019127	tpcn3 (ENSPKIG00000019069)	pgap4 (ENSPKIG00000019039)	DIP2C (ENSPKIG00000018837)	ENSPKIG00000018663	ENSPKIG00000018653	msl2b (ENSPKIG00000018641)	tnfsf10 (ENSPKIG00000018621) #24	nceh1b.1 (ENSPKIG00000018606) #25	ENSPKIG00000018540	FNDC3B (ENSPKIG00000018330) #22	ENSPKIG00000018152 #23	PLD1 (ENSPKIG00000018106) #20	TNIK (ENSPKIG00000018023) #19	eif5a2 (ENSPKIG00000017994) #17	ENSPKIG00000017967 ##14	cldn11b (ENSPKIG00000017897) #11	ENSPKIG00000017843 #7	prkci (ENSPKIG00000017768) #8	skilb (ENSPKIG00000017729) #9	ENSPKIG00000017690
Spotted gar	DUPLICATION
Spotted gar	MODERN SPECIES	652	sec62 (ENSLOCG00000007194)	nadkb (ENSLOCG00000007207)	gpr160 (ENSLOCG00000017404)	SKIL (ENSLOCG00000007221) #9	prkci (ENSLOCG00000007237) #8	PHC3 (ENSLOCG00000007258) #7	cldn11b (ENSLOCG00000007277) #11	slc7a14a (ENSLOCG00000007288) #14	rpl22l1 (ENSLOCG00000007304) #16	eif5a (ENSLOCG00000007318) #17	slc2a2 (ENSLOCG00000007335) #18	tnika (ENSLOCG00000007345) #19	pld1a (ENSLOCG00000007400) #20	TMEM212 (ENSLOCG00000007434) #21	ENSLOCG00000007447 #22	ENSLOCG00000007456 #22	ghsra (ENSLOCG00000007476) #23	tnfsf10 (ENSLOCG00000007485) #24	nceh1b.1 (ENSLOCG00000007501) #25	PPP2R3A (ENSLOCG00000007518)	msl2a (ENSLOCG00000007537)	pccb (ENSLOCG00000007550)	STAG1 (ENSLOCG00000007568)	slc35g2a (ENSLOCG00000017405)	NCK1 (ENSLOCG00000007610)	bdh1 (ENSLOCG00000007627)	HLTF (ENSLOCG00000007640)	gyg1b (ENSLOCG00000007672)	cpb1 (ENSLOCG00000007688)	AGTR1 (ENSLOCG00000017406)	zic1 (ENSLOCG00000007706)
Spotted gar	MODERN SPECIES	652	samd7 (ENSLOCG00000007177)	sec62 (ENSLOCG00000007194)	nadkb (ENSLOCG00000007207)	gpr160 (ENSLOCG00000017404)	SKIL (ENSLOCG00000007221) #9	prkci (ENSLOCG00000007237) #8	PHC3 (ENSLOCG00000007258) #7	cldn11b (ENSLOCG00000007277) #11	slc7a14a (ENSLOCG00000007288) #14	rpl22l1 (ENSLOCG00000007304) #16	eif5a (ENSLOCG00000007318) #17	slc2a2 (ENSLOCG00000007335) #18	tnika (ENSLOCG00000007345) #19	pld1a (ENSLOCG00000007400) #20	TMEM212 (ENSLOCG00000007434) #21	ENSLOCG00000007447 #22	ENSLOCG00000007456 #22	ghsra (ENSLOCG00000007476) #23	tnfsf10 (ENSLOCG00000007485) #24	nceh1b.1 (ENSLOCG00000007501) #25	PPP2R3A (ENSLOCG00000007518)	msl2a (ENSLOCG00000007537)	pccb (ENSLOCG00000007550)	STAG1 (ENSLOCG00000007568)	slc35g2a (ENSLOCG00000017405)	NCK1 (ENSLOCG00000007610)	bdh1 (ENSLOCG00000007627)	HLTF (ENSLOCG00000007640)	gyg1b (ENSLOCG00000007672)	cpb1 (ENSLOCG00000007688)	AGTR1 (ENSLOCG00000017406)
Elephant shark	DUPLICATION
Elephant shark	MODERN SPECIES	3082																ENSCMIG00000004576 #22
Elephant shark	MODERN SPECIES	1900																ENSCMIG00000013328 #22	ghsra (ENSCMIG00000013335) #23	tnfsf10 (ENSCMIG00000013352) #24	pcyt1ab (ENSCMIG00000013355)	tctex1d2 (ENSCMIG00000013357)	ENSCMIG00000013360	ENSCMIG00000013362	ENSCMIG00000013365
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000157005 #22
Hagfish	MODERN SPECIES	586				ENSEBUG00000001810	ENSEBUG00000006341	ENSEBUG00000016250	ENSEBUG00000001560	ENSEBUG00000010131	ENSEBUG00000013253	ENSEBUG00000000576	ENSEBUG00000004207	ENSEBUG00000008538	ENSEBUG00000016364	ENSEBUG00000008855	ENSEBUG00000004896	ENSEBUG00000003204 #22	ENSEBUG00000013941	ENSEBUG00000004023	ENSEBUG00000010955	trpc1 (ENSEBUG00000004622)	ENSEBUG00000007345	ncbp2 (ENSEBUG00000001862)	rap2c (ENSEBUG00000000491)	P2RY1 (ENSEBUG00000011260)	ENSEBUG00000003843	ENSEBUG00000005289	cysltr1 (ENSEBUG00000015562)	ENSEBUG00000005743	zic1 (ENSEBUG00000003951)	ENSEBUG00000005868