Euarchontoglires ANCESTRAL SPECIES 9 ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00910000148326 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Primates ANCESTRAL SPECIES 10 ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00910000148326 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Strepsirrhini ANCESTRAL SPECIES 40 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Lemuriformes ANCESTRAL SPECIES 44 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Lemuriformes_a ANCESTRAL SPECIES 115 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000158146 ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 142 HAUS3 (ENSPSMG00000021939) #18 MXD4 (ENSPSMG00000021932) #19 ZFYVE28 (ENSPSMG00000021894) #20 CFAP99 (ENSPSMG00000021870) #21 RNF4 (ENSPSMG00000021847) #22 ENSPSMG00000021804 #23 FAM193A (ENSPSMG00000021759) #24 TNIP2 (ENSPSMG00000021697) #25 ENSPSMG00000021673 #26 SH3BP2 (ENSPSMG00000021670) #27 ADD1 (ENSPSMG00000021592) #28 ENSPSMG00000021410 #29 NOP14 (ENSPSMG00000021287) #30 ENSPSMG00000021263 #31 HTT (ENSPSMG00000021240) #32 MSANTD1 (ENSPSMG00000021143) #33 RGS12 (ENSPSMG00000021108) #34 HGFAC (ENSPSMG00000021052) #35 DOK7 (ENSPSMG00000021025) #36 LRPAP1 (ENSPSMG00000021000) #37 Greater bamboo lemur MODERN SPECIES 149 ENSPSMG00000023918 ##22 Coquerels sifaka MODERN SPECIES 473 RNF4 (ENSPCOG00000021281) #22 FAM193A (ENSPCOG00000008372) #24 Mouse lemur MODERN SPECIES 9 FAM53A (ENSMICG00000044027) SLBP (ENSMICG00000014244) TMEM129 (ENSMICG00000014263) ENSMICG00000033578 FGFR3 (ENSMICG00000008153) LETM1 (ENSMICG00000008169) NSD2 (ENSMICG00000011335) NELFA (ENSMICG00000011366) C4orf48 (ENSMICG00000046656) NAT8L (ENSMICG00000045400) POLN (ENSMICG00000047538) HAUS3 (ENSMICG00000028831) #18 MXD4 (ENSMICG00000047939) #19 ZFYVE28 (ENSMICG00000031619) #20 CFAP99 (ENSMICG00000036187) #21 RNF4 (ENSMICG00000041515) #22 FAM193A (ENSMICG00000008863) #24 TNIP2 (ENSMICG00000008835) #25 SH3BP2 (ENSMICG00000002298) #27 ENSMICG00000030984 ADD1 (ENSMICG00000007785) #28 MFSD10 (ENSMICG00000007796) NOP14 (ENSMICG00000007804) #30 GRK4 (ENSMICG00000006863) #31 HTT (ENSMICG00000006879) #32 MSANTD1 (ENSMICG00000031701) #33 ENSMICG00000030945 RGS12 (ENSMICG00000007623) #34 HGFAC (ENSMICG00000007634) #35 DOK7 (ENSMICG00000006754) #36 LRPAP1 (ENSMICG00000013565) #37 Bushbaby MODERN SPECIES 313 NKX1-1 (ENSOGAG00000034822) ENSOGAG00000014882 SLBP (ENSOGAG00000009750) TMEM129 (ENSOGAG00000014873) TACC3 (ENSOGAG00000014875) FGFR3 (ENSOGAG00000025157) ENSOGAG00000014883 NSD2 (ENSOGAG00000014890) NELFA (ENSOGAG00000029627) C4orf48 (ENSOGAG00000031277) NAT8L (ENSOGAG00000026595) POLN (ENSOGAG00000011299) HAUS3 (ENSOGAG00000032569) #18 MXD4 (ENSOGAG00000011305) #19 ZFYVE28 (ENSOGAG00000011309) #20 RNF4 (ENSOGAG00000010776) #22 FAM193A (ENSOGAG00000012386) #24 TNIP2 (ENSOGAG00000012391) #25 SH3BP2 (ENSOGAG00000008463) #27 ADD1 (ENSOGAG00000011061) #28 MFSD10 (ENSOGAG00000011069) NOP14 (ENSOGAG00000011073) #30 GRK4 (ENSOGAG00000005619) #31 HTT (ENSOGAG00000007586) #32 MSANTD1 (ENSOGAG00000007605) #33 RGS12 (ENSOGAG00000007608) #34 DOK7 (ENSOGAG00000007622) #36 LRPAP1 (ENSOGAG00000007628) #37 ZNF879 (ENSOGAG00000032797) GRM6 (ENSOGAG00000029331) ENSOGAG00000034371 Haplorrhini ANCESTRAL SPECIES 23 ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00910000148326 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Tarsier MODERN SPECIES 1166 ENSTSYG00000025968 #20 CFAP99 (ENSTSYG00000030106) #21 RNF4 (ENSTSYG00000011244) #22 Simiiformes ANCESTRAL SPECIES 10 ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00910000148326 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Catarrhini ANCESTRAL SPECIES 14 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00650000094590 ENSGT00390000011904 #18 ENSGT00910000148326 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Cercopithecidae ANCESTRAL SPECIES 10 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a.g ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000000703.g.a.c.b ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00650000094590 ENSGT00390000011904 #18 ENSGT00910000148326 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Cercopithecinae ANCESTRAL SPECIES 14 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a.g ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000000703.g.a.c.b ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00650000094590 ENSGT00390000011904 #18 ENSGT00910000148326 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Vervet Monkey MODERN SPECIES 203 GNG5B (ENSCSAG00000000307) RTL9 (ENSCSAG00000008827) CHRDL1 (ENSCSAG00000008818) ENSCSAG00000000306 PAK3 (ENSCSAG00000008810) CAPN6 (ENSCSAG00000008799) DCX (ENSCSAG00000008786) ALG13 (ENSCSAG00000008770) ENSCSAG00000008738 TRPC5 (ENSCSAG00000008718) RTL4 (ENSCSAG00000000305) LHFPL1 (ENSCSAG00000008665) AMOT (ENSCSAG00000008660) HTR2C (ENSCSAG00000008651) IL13RA2 (ENSCSAG00000008610) ENSCSAG00000008574 #22 LRCH2 (ENSCSAG00000008554) ENSCSAG00000008478 ENSCSAG00000008465 ACTRT1 (ENSCSAG00000000304) ENSCSAG00000000303 SMARCA1 (ENSCSAG00000008460) OCRL (ENSCSAG00000008407) APLN (ENSCSAG00000008386) XPNPEP2 (ENSCSAG00000008350) SASH3 (ENSCSAG00000008257) ZDHHC9 (ENSCSAG00000008247) UTP14A (ENSCSAG00000008164) BCORL1 (ENSCSAG00000008013) ELF4 (ENSCSAG00000008005) AIFM1 (ENSCSAG00000008001) Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a.g ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000000703.h.h.a ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00650000094590 ENSGT00390000011904 #18 ENSGT00910000148326 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Macaca ANCESTRAL SPECIES 25 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a.g ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000000703.h.h.a ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00650000094590 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00910000148469 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b Macaca_a ANCESTRAL SPECIES 12 ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a.g ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000000703.h.h.a ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Rhesus MODERN SPECIES 15 FAM53A (ENSMMUG00000008363) SLBP (ENSMMUG00000032303) TMEM129 (ENSMMUG00000064450) TACC3 (ENSMMUG00000011191) FGFR3 (ENSMMUG00000019945) LETM1 (ENSMMUG00000019948) NSD2 (ENSMMUG00000046942) NELFA (ENSMMUG00000009944) ENSMMUG00000003234 CKQ732225.1H4orf48 (ENSMMUG00000032304) POLN (ENSMMUG00000001156) ENSMMUG00000055448 MXD4 (ENSMMUG00000048558) #19 ZFYVE28 (ENSMMUG00000032306) #20 CFAP99 (ENSMMUG00000040759) #21 RNF4 (ENSMMUG00000007948) #22 FAM193A (ENSMMUG00000013158) #24 TNIP2 (ENSMMUG00000007966) #25 SH3BP2 (ENSMMUG00000014335) #27 ADD1 (ENSMMUG00000008379) #28 MFSD10 (ENSMMUG00000008383) #29 NOP14 (ENSMMUG00000008385) #30 HTT (ENSMMUG00000008392) #32 MSANTD1 (ENSMMUG00000008398) #33 RGS12 (ENSMMUG00000007154) #34 HGFAC (ENSMMUG00000007162) #35 DOK7 (ENSMMUG00000046062) #36 ENSMMUG00000050948 ENSMMUG00000059133 LRPAP1 (ENSMMUG00000023099) #37 ADRA2C (ENSMMUG00000014781) Crab-eating macaque MODERN SPECIES 15 TMEM129 (ENSMFAG00000000493) TACC3 (ENSMFAG00000043154) FGFR3 (ENSMFAG00000032292) LETM1 (ENSMFAG00000039886) NSD2 (ENSMFAG00000031384) NELFA (ENSMFAG00000035742) ENSMFAG00000038719 C4orf48 (ENSMFAG00000001046) ENSMFAG00000059887 POLN (ENSMFAG00000032512) ENSMFAG00000062209 HAUS3 (ENSMFAG00000034116) #18 ENSMFAG00000053887 #19 ZFYVE28 (ENSMFAG00000062429) #20 CFAP99 (ENSMFAG00000034253) #21 RNF4 (ENSMFAG00000050616) #22 FAM193A (ENSMFAG00000045259) #24 TNIP2 (ENSMFAG00000003617) #25 SH3BP2 (ENSMFAG00000040599) #27 ADD1 (ENSMFAG00000040609) #28 ENSMFAG00000057548 ENSMFAG00000056415 MFSD10 (ENSMFAG00000038471) GRK4 (ENSMFAG00000000327) #31 HTT (ENSMFAG00000036776) #32 MSANTD1 (ENSMFAG00000030979) #33 RGS12 (ENSMFAG00000039419) #34 HGFAC (ENSMFAG00000002414) #35 DOK7 (ENSMFAG00000045592) #36 LRPAP1 (ENSMFAG00000045907) #37 HMX1 (ENSMFAG00000034271) Pig-tailed macaque MODERN SPECIES 590 TMEM129 (ENSMNEG00000038437) TACC3 (ENSMNEG00000041051) FGFR3 (ENSMNEG00000043249) ENSMNEG00000038507 NSD2 (ENSMNEG00000030530) NELFA (ENSMNEG00000029249) ENSMNEG00000040986 C4orf48 (ENSMNEG00000044160) NAT8L (ENSMNEG00000029002) POLN (ENSMNEG00000044077) ENSMNEG00000034392 HAUS3 (ENSMNEG00000031199) #18 MXD4 (ENSMNEG00000036831) #19 ZFYVE28 (ENSMNEG00000039840) #20 CFAP99 (ENSMNEG00000030381) #21 RNF4 (ENSMNEG00000035146) #22 FAM193A (ENSMNEG00000045102) #24 TNIP2 (ENSMNEG00000045051) #25 SH3BP2 (ENSMNEG00000033987) #27 ADD1 (ENSMNEG00000043560) #28 ENSMNEG00000029943 #29 NOP14 (ENSMNEG00000039699) #30 ENSMNEG00000037083 GRK4 (ENSMNEG00000028235) #31 HTT (ENSMNEG00000037615) #32 MSANTD1 (ENSMNEG00000043740) #33 RGS12 (ENSMNEG00000037042) #34 HGFAC (ENSMNEG00000022644) #35 DOK7 (ENSMNEG00000029872) #36 LRPAP1 (ENSMNEG00000030259) #37 ENSMNEG00000041149 Cercopithecinae_b ANCESTRAL SPECIES 6 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a.g ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000000703.h.h.a ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00910000148326 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Olive baboon MODERN SPECIES 13 SLBP (ENSPANG00000004932) TMEM129 (ENSPANG00000005178) TACC3 (ENSPANG00000007581) FGFR3 (ENSPANG00000024533) LETM1 (ENSPANG00000024554) NSD2 (ENSPANG00000022789) NELFA (ENSPANG00000019016) ENSPANG00000029835 C4orf48 (ENSPANG00000006016) POLN (ENSPANG00000000640) HAUS3 (ENSPANG00000007327) #18 ENSPANG00000049266 MXD4 (ENSPANG00000024535) #19 ZFYVE28 (ENSPANG00000001128) #20 CFAP99 (ENSPANG00000034047) #21 RNF4 (ENSPANG00000013408) #22 FAM193A (ENSPANG00000006875) #24 TNIP2 (ENSPANG00000019351) #25 SH3BP2 (ENSPANG00000021586) #27 ADD1 (ENSPANG00000018890) #28 ENSPANG00000018032 NOP14 (ENSPANG00000009642) #30 GRK4 (ENSPANG00000015062) #31 HTT (ENSPANG00000020180) #32 MSANTD1 (ENSPANG00000012405) #33 ENSPANG00000041456 #34 ENSPANG00000016251 #34 HGFAC (ENSPANG00000021871) #35 ENSPANG00000018167 #36 LRPAP1 (ENSPANG00000015064) #37 HTRA3 (ENSPANG00000007655) Cercopithecinae_d ANCESTRAL SPECIES 85 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a.g ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Sooty mangabey MODERN SPECIES 649 SLBP (ENSCATG00000029173) TMEM129 (ENSCATG00000029726) TACC3 (ENSCATG00000029112) FGFR3 (ENSCATG00000033697) ENSCATG00000042406 NSD2 (ENSCATG00000013442) NELFA (ENSCATG00000036998) C4orf48 (ENSCATG00000036109) NAT8L (ENSCATG00000039077) ENSCATG00000036129 POLN (ENSCATG00000038015) HAUS3 (ENSCATG00000038591) #18 MXD4 (ENSCATG00000037468) #19 ZFYVE28 (ENSCATG00000043569) #20 CFAP99 (ENSCATG00000015552) #21 RNF4 (ENSCATG00000035992) #22 FAM193A (ENSCATG00000042635) #24 ENSCATG00000012185 SH3BP2 (ENSCATG00000032838) #27 ADD1 (ENSCATG00000020512) #28 ENSCATG00000036685 #29 NOP14 (ENSCATG00000032427) #30 GRK4 (ENSCATG00000035371) #31 HTT (ENSCATG00000040455) #32 MSANTD1 (ENSCATG00000035501) #33 RGS12 (ENSCATG00000034123) #34 HGFAC (ENSCATG00000040884) #35 DOK7 (ENSCATG00000036059) #36 LRPAP1 (ENSCATG00000035154) #37 ADRA2C (ENSCATG00000042063) HMX1 (ENSCATG00000032412) Drill MODERN SPECIES 1719 SLBP (ENSMLEG00000024639) TMEM129 (ENSMLEG00000040279) TACC3 (ENSMLEG00000010263) FGFR3 (ENSMLEG00000030618) ENSMLEG00000040964 NSD2 (ENSMLEG00000037492) NELFA (ENSMLEG00000031010) C4orf48 (ENSMLEG00000032446) ENSMLEG00000041510 ENSMLEG00000032508 POLN (ENSMLEG00000038809) HAUS3 (ENSMLEG00000035756) #18 MXD4 (ENSMLEG00000021543) #19 ZFYVE28 (ENSMLEG00000026808) #20 CFAP99 (ENSMLEG00000042081) #21 RNF4 (ENSMLEG00000038069) #22 ENSMLEG00000011279 FAM193A (ENSMLEG00000042643) #24 TNIP2 (ENSMLEG00000034847) #25 SH3BP2 (ENSMLEG00000043782) #27 ADD1 (ENSMLEG00000031385) #28 MFSD10 (ENSMLEG00000038994) NOP14 (ENSMLEG00000037295) #30 ENSMLEG00000030334 Rhinopithecus ANCESTRAL SPECIES 135 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a.g ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000000703.g.a.c.b ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00650000094590 ENSGT01080000257748.b ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00940000164052.c ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000162580 Golden snub-nosed monkey MODERN SPECIES 2481 TMEM129 (ENSRROG00000041532) TACC3 (ENSRROG00000039140) FGFR3 (ENSRROG00000042585) LETM1 (ENSRROG00000038867) NSD2 (ENSRROG00000033896) NELFA (ENSRROG00000040024) ENSRROG00000017138 C4orf48 (ENSRROG00000029831) ENSRROG00000020413 POLN (ENSRROG00000045711) ENSRROG00000031302 HAUS3 (ENSRROG00000033454) #18 MXD4 (ENSRROG00000040089) #19 ZFYVE28 (ENSRROG00000026858) #20 CFAP99 (ENSRROG00000041025) #21 RNF4 (ENSRROG00000038892) #22 FAM193A (ENSRROG00000033008) #24 TNIP2 (ENSRROG00000045312) #25 SH3BP2 (ENSRROG00000022973) #27 ADD1 (ENSRROG00000038685) #28 ENSRROG00000041583 #29 NOP14 (ENSRROG00000045728) #30 GRK4 (ENSRROG00000011824) #31 HTT (ENSRROG00000039794) #32 MSANTD1 (ENSRROG00000035877) #33 RGS12 (ENSRROG00000030055) #34 HGFAC (ENSRROG00000039081) #35 DOK7 (ENSRROG00000035330) #36 LRPAP1 (ENSRROG00000001847) #37 HMX1 (ENSRROG00000045506) CPZ (ENSRROG00000029378) Black snub-nosed monkey MODERN SPECIES 539 TMEM129 (ENSRBIG00000015368) TACC3 (ENSRBIG00000042233) FGFR3 (ENSRBIG00000040633) LETM1 (ENSRBIG00000038284) NSD2 (ENSRBIG00000043171) NELFA (ENSRBIG00000031633) ENSRBIG00000037817 C4orf48 (ENSRBIG00000037248) ENSRBIG00000044373 POLN (ENSRBIG00000007947) ENSRBIG00000041367 HAUS3 (ENSRBIG00000037222) #18 MXD4 (ENSRBIG00000043500) #19 ZFYVE28 (ENSRBIG00000020333) #20 CFAP99 (ENSRBIG00000035346) #21 RNF4 (ENSRBIG00000027423) #22 CDCP1 (ENSRBIG00000030951) CLEC3B (ENSRBIG00000039337) EXOSC7 (ENSRBIG00000040862) ZDHHC3 (ENSRBIG00000037122) TGM4 (ENSRBIG00000043476) TMEM42 (ENSRBIG00000043252) KIF15 (ENSRBIG00000044091) KIAA1143 (ENSRBIG00000025898) ZNF501 (ENSRBIG00000017749) ZNF502 (ENSRBIG00000039081) ENSRBIG00000019349 ZNF35 (ENSRBIG00000028312) ZNF197 (ENSRBIG00000044809) ZNF660 (ENSRBIG00000030769) ZKSCAN7 (ENSRBIG00000032088) Hominoidea DUPLICATION Hominoidea ANCESTRAL SPECIES 10 ENSGT00940000158858 ENSGT00910000148485 ENSGT00940000159880 ENSGT00950000183167.a.b.a.i ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00650000094590 ENSGT00390000011904 #18 ENSGT00910000148326 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318.u #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00940000164295 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Gibbon DUPLICATION Gibbon MODERN SPECIES 12 ENSNLEG00000035802 TACC3 (ENSNLEG00000000057) ENSNLEG00000000063 LETM1 (ENSNLEG00000000067) NSD2 (ENSNLEG00000000081) ENSNLEG00000000120 ENSNLEG00000030858 ENSNLEG00000035664 ENSNLEG00000000145 #18 POLN (ENSNLEG00000000132) ENSNLEG00000036277 ENSNLEG00000000149 #19 ZFYVE28 (ENSNLEG00000000151) #20 ENSNLEG00000000154 #21 ENSNLEG00000034085 ENSNLEG00000031900 #22 FAM193A (ENSNLEG00000000167) #24 ENSNLEG00000000191 #25 SH3BP2 (ENSNLEG00000000199) #27 ADD1 (ENSNLEG00000000201) #28 MFSD10 (ENSNLEG00000000234) NOP14 (ENSNLEG00000000239) #30 GRK4 (ENSNLEG00000000261) #31 HTT (ENSNLEG00000000273) #32 ENSNLEG00000000286 #33 ENSNLEG00000000287 #34 HGFAC (ENSNLEG00000000301) #35 DOK7 (ENSNLEG00000000308) #36 LRPAP1 (ENSNLEG00000000309) #37 ENSNLEG00000018645 ENSNLEG00000031510 Gibbon MODERN SPECIES 20 ENSNLEG00000032941 ENSNLEG00000014345 ACTA1 (ENSNLEG00000014347) NUP133 (ENSNLEG00000014372) ABCB10 (ENSNLEG00000014442) TAF5L (ENSNLEG00000014446) URB2 (ENSNLEG00000014450) GALNT2 (ENSNLEG00000014277) ENSNLEG00000001544 COG2 (ENSNLEG00000001549) AGT (ENSNLEG00000001707) CAPN9 (ENSNLEG00000001757) C1orf198 (ENSNLEG00000032246) ENSNLEG00000026858 ARV1 (ENSNLEG00000001810) ENSNLEG00000031978 #22 FAM89A (ENSNLEG00000001853) ENSNLEG00000032200 ENSNLEG00000032423 TRIM67 (ENSNLEG00000001870) ENSNLEG00000035568 C1orf131 (ENSNLEG00000001871) GNPAT (ENSNLEG00000001914) EXOC8 (ENSNLEG00000018836) ENSNLEG00000028903 SPRTN (ENSNLEG00000002094) EGLN1 (ENSNLEG00000002120) ENSNLEG00000036156 TSNAX (ENSNLEG00000035882) ENSNLEG00000002177 SIPA1L2 (ENSNLEG00000002184) Hominidae ANCESTRAL SPECIES 12 ENSGT00940000158858 ENSGT00910000148485 ENSGT00940000159880 ENSGT00950000183167.a.b.a.i ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00650000094590 ENSGT00390000011904 #18 ENSGT00910000148326 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318.u #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00940000164295 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Homo/Pan/Gorilla group ANCESTRAL SPECIES 11 ENSGT00390000013284 ENSGT00940000158858 ENSGT00910000148485 ENSGT00940000159880 ENSGT00950000183167.a.b.a.i ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00650000094590 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318.u #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00940000164295 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000159350.c Homo/Pan group ANCESTRAL SPECIES 10 ENSGT00390000013284 ENSGT00940000158858 ENSGT00910000148485 ENSGT00940000159880 ENSGT00950000183167.a.b.a.i ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00650000094590 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318.u #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00940000164295 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000159350.c Pan ANCESTRAL SPECIES 7 ENSGT00390000013284 ENSGT00940000158858 ENSGT00910000148485 ENSGT00940000159880 ENSGT00950000183167.a.b.a.i ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00650000094590 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318.u #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00940000164295 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000159350.c Chimpanzee MODERN SPECIES 17 SLBP (ENSPTRG00000015832) TMEM129 (ENSPTRG00000015833) TACC3 (ENSPTRG00000015834) FGFR3 (ENSPTRG00000015836) LETM1 (ENSPTRG00000015837) NSD2 (ENSPTRG00000015838) NELFA (ENSPTRG00000015840) C4H4orf48 (ENSPTRG00000031284) NAT8L (ENSPTRG00000047587) POLN (ENSPTRG00000034296) ENSPTRG00000052565 HAUS3 (ENSPTRG00000015843) #18 MXD4 (ENSPTRG00000015844) #19 ZFYVE28 (ENSPTRG00000015845) #20 CFAP99 (ENSPTRG00000039939) #21 RNF4 (ENSPTRG00000046370) #22 FAM193A (ENSPTRG00000015847) #24 TNIP2 (ENSPTRG00000015848) #25 SH3BP2 (ENSPTRG00000046864) #27 ADD1 (ENSPTRG00000015850) #28 MFSD10 (ENSPTRG00000015851) NOP14 (ENSPTRG00000015852) #30 GRK4 (ENSPTRG00000015853) #31 HTT (ENSPTRG00000015854) #32 MSANTD1 (ENSPTRG00000015855) #33 RGS12 (ENSPTRG00000015856) #34 HGFAC (ENSPTRG00000015857) #35 DOK7 (ENSPTRG00000015858) #36 LRPAP1 (ENSPTRG00000015860) #37 ADRA2C (ENSPTRG00000034025) ENSPTRG00000048734 Bonobo MODERN SPECIES 17 TMEM129 (ENSPPAG00000032640) TACC3 (ENSPPAG00000041213) ENSPPAG00000039682 FGFR3 (ENSPPAG00000034154) LETM1 (ENSPPAG00000022259) NSD2 (ENSPPAG00000028888) NELFA (ENSPPAG00000039571) ENSPPAG00000040365 ENSPPAG00000033617 POLN (ENSPPAG00000042877) ENSPPAG00000026673 HAUS3 (ENSPPAG00000032988) #18 ENSPPAG00000042591 #19 ZFYVE28 (ENSPPAG00000013584) #20 CFAP99 (ENSPPAG00000035753) #21 RNF4 (ENSPPAG00000035112) #22 FAM193A (ENSPPAG00000039176) #24 ENSPPAG00000035246 #25 SH3BP2 (ENSPPAG00000036464) #27 ADD1 (ENSPPAG00000039399) #28 MFSD10 (ENSPPAG00000041607) NOP14 (ENSPPAG00000037688) #30 GRK4 (ENSPPAG00000030121) #31 HTT (ENSPPAG00000029038) #32 MSANTD1 (ENSPPAG00000037208) #33 RGS12 (ENSPPAG00000034542) #34 HGFAC (ENSPPAG00000019181) #35 DOK7 (ENSPPAG00000032260) #36 LRPAP1 (ENSPPAG00000043861) #37 ENSPPAG00000027549 OTOP1 (ENSPPAG00000030805) Human MODERN SPECIES 16 FAM53A (ENSG00000174137) SLBP (ENSG00000163950) TACC3 (ENSG00000013810) TMEM129 (ENSG00000168936) FGFR3 (ENSG00000068078) LETM1 (ENSG00000168924) NSD2 (ENSG00000109685) NELFA (ENSG00000185049) C4orf48 (ENSG00000243449) NAT8L (ENSG00000185818) POLN (ENSG00000130997) HAUS3 (ENSG00000214367) #18 MXD4 (ENSG00000123933) #19 ZFYVE28 (ENSG00000159733) #20 CFAP99 (ENSG00000206113) #21 RNF4 (ENSG00000063978) #22 FAM193A (ENSG00000125386) #24 TNIP2 (ENSG00000168884) #25 SH3BP2 (ENSG00000087266) #27 ADD1 (ENSG00000087274) #28 MFSD10 (ENSG00000109736) NOP14 (ENSG00000087269) #30 GRK4 (ENSG00000125388) #31 HTT (ENSG00000197386) #32 MSANTD1 (ENSG00000188981) #33 RGS12 (ENSG00000159788) #34 HGFAC (ENSG00000109758) #35 DOK7 (ENSG00000175920) #36 LRPAP1 (ENSG00000163956) #37 ADRA2C (ENSG00000184160) OTOP1 (ENSG00000163982) Gorilla MODERN SPECIES 17 SLBP (ENSGGOG00000003167) TMEM129 (ENSGGOG00000039598) TACC3 (ENSGGOG00000041158) FGFR3 (ENSGGOG00000015081) LETM1 (ENSGGOG00000002923) NSD2 (ENSGGOG00000014144) NELFA (ENSGGOG00000014161) ENSGGOG00000041239 ENSGGOG00000037682 POLN (ENSGGOG00000006832) ENSGGOG00000015700 HAUS3 (ENSGGOG00000000744) #18 MXD4 (ENSGGOG00000000747) #19 ZFYVE28 (ENSGGOG00000000748) #20 CFAP99 (ENSGGOG00000041964) #21 RNF4 (ENSGGOG00000036446) #22 ENSGGOG00000025865 SH3BP2 (ENSGGOG00000014162) #27 ADD1 (ENSGGOG00000007407) #28 MFSD10 (ENSGGOG00000007420) NOP14 (ENSGGOG00000011213) #30 GRK4 (ENSGGOG00000011226) #31 HTT (ENSGGOG00000016385) #32 MSANTD1 (ENSGGOG00000016453) #33 RGS12 (ENSGGOG00000003385) #34 HGFAC (ENSGGOG00000011172) #35 ENSGGOG00000003413 #36 ENSGGOG00000039176 ENSGGOG00000043042 #36 LRPAP1 (ENSGGOG00000003417) #37 ENSGGOG00000010546 Orangutan MODERN SPECIES 17 TMEM129 (ENSPPYG00000014530) TACC3 (ENSPPYG00000014531) FGFR3 (ENSPPYG00000014532) LETM1 (ENSPPYG00000014533) NSD2 (ENSPPYG00000014534) NELFA (ENSPPYG00000014535) ENSPPYG00000014536 NAT8L (ENSPPYG00000014537) POLN (ENSPPYG00000014538) ENSPPYG00000040447 ENSPPYG00000014539 #18 ENSPPYG00000036280 ENSPPYG00000037498 #19 ZFYVE28 (ENSPPYG00000014542) #20 CFAP99 (ENSPPYG00000040137) #21 RNF4 (ENSPPYG00000025865) #22 FAM193A (ENSPPYG00000014544) #24 TNIP2 (ENSPPYG00000014545) #25 SH3BP2 (ENSPPYG00000014546) #27 ADD1 (ENSPPYG00000014547) #28 ENSPPYG00000014548 #29 NOP14 (ENSPPYG00000014549) #30 GRK4 (ENSPPYG00000014550) #31 HTT (ENSPPYG00000014551) #32 MSANTD1 (ENSPPYG00000014552) #33 RGS12 (ENSPPYG00000014553) #34 HGFAC (ENSPPYG00000029408) #35 DOK7 (ENSPPYG00000014554) #36 LRPAP1 (ENSPPYG00000014556) #37 ADRA2C (ENSPPYG00000036306) HMX1 (ENSPPYG00000015293) Hominoidea ANCESTRAL SPECIES ENSGT00390000010318.v #22 Gibbon MODERN SPECIES ENSNLEG00000028474 ENSNLEG00000032806 ZNF708 (ENSNLEG00000030286) ENSNLEG00000031200 ENSNLEG00000029698 ZNF493 (ENSNLEG00000032017) ENSNLEG00000018647 ENSNLEG00000000122 ENSNLEG00000028691 ENSNLEG00000007703 ZNF43 (ENSNLEG00000031185) ENSNLEG00000032305 ENSNLEG00000034671 ZNF676 (ENSNLEG00000027600) ENSNLEG00000034432 ENSNLEG00000034174 #22 ENSNLEG00000027835 ENSNLEG00000007695 ENSNLEG00000036268 ENSNLEG00000032746 ENSNLEG00000036141 ZNF728 (ENSNLEG00000008927) ENSNLEG00000008916 ENSNLEG00000014075 ENSNLEG00000034498 ENSNLEG00000030674 ZNF681 (ENSNLEG00000026595) ZNF726 (ENSNLEG00000028061) ZNF254 (ENSNLEG00000034962) ENSNLEG00000030634 UQCRFS1 (ENSNLEG00000007588) Hominidae ANCESTRAL SPECIES ENSGT00390000010318.v #22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00390000010318.v #22 Homo/Pan group ANCESTRAL SPECIES ENSGT00390000010318.v #22 Pan ANCESTRAL SPECIES ENSGT00390000010318.v #22 Chimpanzee MODERN SPECIES ACTA1 (ENSPTRG00000002086) NUP133 (ENSPTRG00000002088) ABCB10 (ENSPTRG00000002090) TAF5L (ENSPTRG00000002091) URB2 (ENSPTRG00000002092) ENSPTRG00000047372 GALNT2 (ENSPTRG00000002093) PGBD5 (ENSPTRG00000002094) COG2 (ENSPTRG00000002095) AGT (ENSPTRG00000002096) CAPN9 (ENSPTRG00000002097) C1H1orf198 (ENSPTRG00000002099) TTC13 (ENSPTRG00000002101) ARV1 (ENSPTRG00000002102) FAM89A (ENSPTRG00000002103) ENSPTRG00000039222 #22 TRIM67 (ENSPTRG00000002104) ENSPTRG00000049171 C1H1orf131 (ENSPTRG00000002106) GNPAT (ENSPTRG00000002107) EXOC8 (ENSPTRG00000002108) SPRTN (ENSPTRG00000002109) EGLN1 (ENSPTRG00000002110) TSNAX (ENSPTRG00000002111) DISC1 (ENSPTRG00000002112) SIPA1L2 (ENSPTRG00000002114) MAP10 (ENSPTRG00000034279) ENSPTRG00000002116 PCNX2 (ENSPTRG00000002117) ENSPTRG00000051060 MAP3K21 (ENSPTRG00000002119) Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES 5 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342.j ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318.w #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422.a #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00950000182895.a.a.a.a.b.k.v.a Cebidae ANCESTRAL SPECIES 4 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342.j ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318.w #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422.a #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00950000182895.a.a.a.a.b.k.v.a Marmoset MODERN SPECIES 15 NKX1-1 (ENSCJAG00000079323) FAM53A (ENSCJAG00000001781) SLBP (ENSCJAG00000001790) TACC3 (ENSCJAG00000001805) FGFR3 (ENSCJAG00000001819) ENSCJAG00000059838 LETM1 (ENSCJAG00000001859) NSD2 (ENSCJAG00000001876) NELFA (ENSCJAG00000039975) C4orf48 (ENSCJAG00000044010) NAT8L (ENSCJAG00000014504) HAUS3 (ENSCJAG00000036903) #18 MXD4 (ENSCJAG00000066421) #19 ZFYVE28 (ENSCJAG00000038192) #20 CFAP99 (ENSCJAG00000038947) #21 RNF4 (ENSCJAG00000014371) #22 ENSCJAG00000057846 FAM193A (ENSCJAG00000014343) #24 TNIP2 (ENSCJAG00000014338) #25 SH3BP2 (ENSCJAG00000014306) #27 ADD1 (ENSCJAG00000014227) #28 ENSCJAG00000014217 #29 NOP14 (ENSCJAG00000014174) #30 GRK4 (ENSCJAG00000014129) #31 HTT (ENSCJAG00000014069) #32 MSANTD1 (ENSCJAG00000014062) #33 RGS12 (ENSCJAG00000014023) #34 HGFAC (ENSCJAG00000014013) #35 DOK7 (ENSCJAG00000014004) #36 LRPAP1 (ENSCJAG00000013237) #37 ADRA2C (ENSCJAG00000040081) Cebidae_a ANCESTRAL SPECIES 34 ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342.j ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318.x #22 ENSGT00390000010318.w #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422.a #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000156391 ENSGT00950000183001.b Bolivian squirrel monkey MODERN SPECIES 108 FAM53A (ENSSBOG00000034926) SLBP (ENSSBOG00000033897) TMEM129 (ENSSBOG00000035214) TACC3 (ENSSBOG00000022484) FGFR3 (ENSSBOG00000028613) LETM1 (ENSSBOG00000027558) NSD2 (ENSSBOG00000020624) NELFA (ENSSBOG00000024481) ENSSBOG00000021831 POLN (ENSSBOG00000029730) HAUS3 (ENSSBOG00000035151) #18 MXD4 (ENSSBOG00000020590) #19 ZFYVE28 (ENSSBOG00000024678) #20 CFAP99 (ENSSBOG00000026143) #21 ENSSBOG00000010070 RNF4 (ENSSBOG00000031127) #22 FAM193A (ENSSBOG00000035392) #24 ENSSBOG00000028277 SH3BP2 (ENSSBOG00000004638) #27 ADD1 (ENSSBOG00000032628) #28 ENSSBOG00000030513 #29 NOP14 (ENSSBOG00000034906) #30 GRK4 (ENSSBOG00000034886) #31 HTT (ENSSBOG00000001468) #32 MSANTD1 (ENSSBOG00000032002) #33 RGS12 (ENSSBOG00000001879) #34 ENSSBOG00000029708 HGFAC (ENSSBOG00000025765) #35 DOK7 (ENSSBOG00000034734) #36 LRPAP1 (ENSSBOG00000025745) #37 ENSSBOG00000026148 Capuchin MODERN SPECIES 407 BMP4 (ENSCCAG00000036218) CDKN3 (ENSCCAG00000023867) CNIH1 (ENSCCAG00000001116) GMFB (ENSCCAG00000030732) ENSCCAG00000001422 #22 CGRRF1 (ENSCCAG00000021426) SAMD4A (ENSCCAG00000025222) GCH1 (ENSCCAG00000036801) PPP1R42 (ENSCCAG00000035164) TCF24 (ENSCCAG00000035473) MCMDC2 (ENSCCAG00000028913) SGK3 (ENSCCAG00000020725) Mas night monkey MODERN SPECIES 1118 SLBP (ENSANAG00000034769) TMEM129 (ENSANAG00000036729) TACC3 (ENSANAG00000028183) FGFR3 (ENSANAG00000026958) LETM1 (ENSANAG00000037304) NSD2 (ENSANAG00000035180) NELFA (ENSANAG00000027096) C4orf48 (ENSANAG00000032965) NAT8L (ENSANAG00000026210) POLN (ENSANAG00000025375) HAUS3 (ENSANAG00000029444) #18 MXD4 (ENSANAG00000026969) #19 ENSANAG00000026828 #20 ENSANAG00000037948 #20 CFAP99 (ENSANAG00000029171) #21 RNF4 (ENSANAG00000034781) #22 FAM193A (ENSANAG00000032586) #24 TNIP2 (ENSANAG00000033040) #25 Platyrrhini ANCESTRAL SPECIES ENSGT00390000010318.x #22 Cebidae ANCESTRAL SPECIES ENSGT00390000010318.x #22 Cebidae_a ANCESTRAL SPECIES 34 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342.j ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318.x #22 ENSGT00390000010318.w #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422.a #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000156391 Capuchin MODERN SPECIES 521 CFAP99 (ENSCCAG00000029013) #21 ENSCCAG00000036395 #22 FAM193A (ENSCCAG00000036471) #24 TNIP2 (ENSCCAG00000026551) #25 SH3BP2 (ENSCCAG00000033965) #27 ADD1 (ENSCCAG00000028408) #28 ENSCCAG00000018868 #29 NOP14 (ENSCCAG00000034221) #30 GRK4 (ENSCCAG00000022457) #31 HTT (ENSCCAG00000029611) #32 MSANTD1 (ENSCCAG00000001190) #33 RGS12 (ENSCCAG00000028437) #34 HGFAC (ENSCCAG00000028565) #35 DOK7 (ENSCCAG00000020081) #36 LRPAP1 (ENSCCAG00000030718) #37 ENSCCAG00000036922 #20 Euarchontoglires_A ANCESTRAL SPECIES 9 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Glires ANCESTRAL SPECIES 8 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Lagomorpha ANCESTRAL SPECIES 187 ENSGT00940000157429 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 Rabbit DUPLICATION Rabbit MODERN SPECIES 529 ENSOCUG00000033780 ENSOCUG00000005245 ENSOCUG00000027729 POLN (ENSOCUG00000005626) HAUS3 (ENSOCUG00000021362) #18 MXD4 (ENSOCUG00000005063) #19 ENSOCUG00000004377 #20 ENSOCUG00000033870 CFAP99 (ENSOCUG00000036986) #21 ENSOCUG00000004998 #22 FAM193A (ENSOCUG00000017730) #24 TNIP2 (ENSOCUG00000010033) #25 SH3BP2 (ENSOCUG00000000161) #27 ADD1 (ENSOCUG00000024333) #28 NOP14 (ENSOCUG00000004725) #30 GRK4 (ENSOCUG00000005838) #31 HTT (ENSOCUG00000009805) #32 MSANTD1 (ENSOCUG00000023300) #33 Rabbit MODERN SPECIES 4 ENSOCUG00000023504 EPS15 (ENSOCUG00000004293) TTC39A (ENSOCUG00000007583) RNF11 (ENSOCUG00000007582) C1orf185 (ENSOCUG00000027363) ENSOCUG00000038347 CDKN2C (ENSOCUG00000008385) FAF1 (ENSOCUG00000031945) DMRTA2 (ENSOCUG00000001019) ELAVL4 (ENSOCUG00000016262) ENSOCUG00000037999 ENSOCUG00000030354 ENSOCUG00000029778 ENSOCUG00000031084 ENSOCUG00000035051 ENSOCUG00000023561 #22 ENSOCUG00000011146 ENSOCUG00000033406 BEND5 (ENSOCUG00000006471) ENSOCUG00000006460 SPATA6 (ENSOCUG00000008704) ENSOCUG00000021113 SLC5A9 (ENSOCUG00000007119) ENSOCUG00000031714 TRABD2B (ENSOCUG00000035774) CMPK1 (ENSOCUG00000012424) STIL (ENSOCUG00000013586) TAL1 (ENSOCUG00000017248) ENSOCUG00000038723 ENSOCUG00000030697 CYP4X1 (ENSOCUG00000008267) Pika MODERN SPECIES 1878 RNF4 (ENSOPRG00000004317) #22 Rodentia ANCESTRAL SPECIES 13 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Rodentia_A ANCESTRAL SPECIES 20 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Sciuridae ANCESTRAL SPECIES 19 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES 26 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318.o #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Alpin marmot MODERN SPECIES 9 UVSSA (ENSMMMG00000009148) FAM53A (ENSMMMG00000009208) SLBP (ENSMMMG00000009227) TMEM129 (ENSMMMG00000009228) TACC3 (ENSMMMG00000009234) FGFR3 (ENSMMMG00000009271) ENSMMMG00000010030 NSD2 (ENSMMMG00000010052) NELFA (ENSMMMG00000010244) ENSMMMG00000010260 POLN (ENSMMMG00000010281) HAUS3 (ENSMMMG00000010462) #18 MXD4 (ENSMMMG00000010466) #19 ZFYVE28 (ENSMMMG00000010480) #20 CFAP99 (ENSMMMG00000010512) #21 RNF4 (ENSMMMG00000010533) #22 FAM193A (ENSMMMG00000010560) #24 TNIP2 (ENSMMMG00000010616) #25 SH3BP2 (ENSMMMG00000010638) #27 ADD1 (ENSMMMG00000010678) #28 ENSMMMG00000012548 #29 NOP14 (ENSMMMG00000012574) #30 GRK4 (ENSMMMG00000012594) #31 HTT (ENSMMMG00000012619) #32 MSANTD1 (ENSMMMG00000012701) #33 RGS12 (ENSMMMG00000012736) #34 HGFAC (ENSMMMG00000013025) #35 LRPAP1 (ENSMMMG00000013053) #37 ADRA2C (ENSMMMG00000014251) CPZ (ENSMMMG00000014261) TRMT44 (ENSMMMG00000014276) Marmotini_b ANCESTRAL SPECIES 33 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318.o #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Arctic ground squirrel MODERN SPECIES 154 HAUS3 (ENSUPAG00010005760) #18 MXD4 (ENSUPAG00010005747) #19 ZFYVE28 (ENSUPAG00010005731) #20 CFAP99 (ENSUPAG00010005640) #21 RNF4 (ENSUPAG00010005616) #22 FAM193A (ENSUPAG00010005579) #24 TNIP2 (ENSUPAG00010005563) #25 SH3BP2 (ENSUPAG00010005541) #27 ADD1 (ENSUPAG00010005437) #28 ENSUPAG00010005416 #29 NOP14 (ENSUPAG00010005404) #30 GRK4 (ENSUPAG00010005384) #31 HTT (ENSUPAG00010005314) #32 MSANTD1 (ENSUPAG00010005291) #33 RGS12 (ENSUPAG00010005196) #34 HGFAC (ENSUPAG00010005168) #35 DOK7 (ENSUPAG00010005159) #36 LRPAP1 (ENSUPAG00010005144) #37 ADRA2C (ENSUPAG00010005139) HMX1 (ENSUPAG00010005133) Squirrel MODERN SPECIES 77 ENSSTOG00000031320 FAM53A (ENSSTOG00000023406) SLBP (ENSSTOG00000003262) TMEM129 (ENSSTOG00000020817) TACC3 (ENSSTOG00000012665) FGFR3 (ENSSTOG00000000815) LETM1 (ENSSTOG00000014167) NSD2 (ENSSTOG00000003369) NELFA (ENSSTOG00000003421) ENSSTOG00000024159 POLN (ENSSTOG00000001059) HAUS3 (ENSSTOG00000020375) #18 MXD4 (ENSSTOG00000028770) #19 ZFYVE28 (ENSSTOG00000012220) #20 CFAP99 (ENSSTOG00000032892) #21 ENSSTOG00000011101 #22 FAM193A (ENSSTOG00000007426) #24 TNIP2 (ENSSTOG00000007444) #25 SH3BP2 (ENSSTOG00000028939) #27 ADD1 (ENSSTOG00000009726) #28 ENSSTOG00000025349 #29 NOP14 (ENSSTOG00000009739) #30 GRK4 (ENSSTOG00000009753) #31 HTT (ENSSTOG00000009766) #32 MSANTD1 (ENSSTOG00000001629) #33 RGS12 (ENSSTOG00000022380) #34 HGFAC (ENSSTOG00000025456) #35 DOK7 (ENSSTOG00000004961) #36 LRPAP1 (ENSSTOG00000002323) #37 HMX1 (ENSSTOG00000034792) CPZ (ENSSTOG00000027638) Marmotini ANCESTRAL SPECIES ENSGT00390000010318.p #22 Marmotini_b ANCESTRAL SPECIES ENSGT00390000010318.p #22 Squirrel MODERN SPECIES 365 SDK1 (ENSSTOG00000002001) FOXK1 (ENSSTOG00000000564) AP5Z1 (ENSSTOG00000027215) RADIL (ENSSTOG00000000578) MMD2 (ENSSTOG00000023967) WIPI2 (ENSSTOG00000001382) SLC29A4 (ENSSTOG00000001393) TNRC18 (ENSSTOG00000026995) FBXL18 (ENSSTOG00000028236) ACTB (ENSSTOG00000014797) FSCN1 (ENSSTOG00000020923) RNF216 (ENSSTOG00000004045) ENSSTOG00000022953 ENSSTOG00000030067 RBAK (ENSSTOG00000031749) ENSSTOG00000020799 #22 ENSSTOG00000000412 ZNF12 (ENSSTOG00000022132) ZNF316 (ENSSTOG00000027773) ZNF853 (ENSSTOG00000019895) INTS15 (ENSSTOG00000011614) ZDHHC4 (ENSSTOG00000011605) GRID2IP (ENSSTOG00000028699) KDELR2 (ENSSTOG00000006820) Eurasian red squirrel MODERN SPECIES 18 TACC3 (ENSSVLG00005010736) FGFR3 (ENSSVLG00005018602) ENSSVLG00005018420 NSD2 (ENSSVLG00005018333) NELFA (ENSSVLG00005018189) C4orf48 (ENSSVLG00005018142) NAT8L (ENSSVLG00005018097) ENSSVLG00005018048 ENSSVLG00005018005 POLN (ENSSVLG00005017739) HAUS3 (ENSSVLG00005017655) #18 MXD4 (ENSSVLG00005017609) #19 ENSSVLG00005017576 #20 ENSSVLG00005017470 #20 CFAP99 (ENSSVLG00005017288) #21 RNF4 (ENSSVLG00005017190) #22 FAM193A (ENSSVLG00005016851) #24 TNIP2 (ENSSVLG00005016767) #25 SH3BP2 (ENSSVLG00005016520) #27 ADD1 (ENSSVLG00005016341) #28 ENSSVLG00005016233 #29 NOP14 (ENSSVLG00005016178) #30 GRK4 (ENSSVLG00005015841) #31 HTT (ENSSVLG00005015171) #32 MSANTD1 (ENSSVLG00005015035) #33 RGS12 (ENSSVLG00005014175) #34 HGFAC (ENSSVLG00005013667) #35 DOK7 (ENSSVLG00005013571) #36 LRPAP1 (ENSSVLG00005013407) #37 ADRA2C (ENSSVLG00005013315) HMX1 (ENSSVLG00005013295) Hystricomorpha ANCESTRAL SPECIES 26 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043.f ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00940000164052 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b Hystricomorpha_a ANCESTRAL SPECIES 23 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043.f ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00940000164052 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741.y #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Guinea pig MODERN SPECIES 24 FAM53A (ENSCPOG00000033116) SLBP (ENSCPOG00000000031) TMEM129 (ENSCPOG00000000032) TACC3 (ENSCPOG00000023531) FGFR3 (ENSCPOG00000025595) LETM1 (ENSCPOG00000011337) NSD2 (ENSCPOG00000007513) NELFA (ENSCPOG00000019715) C4orf48 (ENSCPOG00000031206) ENSCPOG00000038761 POLN (ENSCPOG00000001665) HAUS3 (ENSCPOG00000021994) #18 MXD4 (ENSCPOG00000022492) #19 ZFYVE28 (ENSCPOG00000027392) #20 CFAP99 (ENSCPOG00000040209) #21 RNF4 (ENSCPOG00000030545) #22 FAM193A (ENSCPOG00000004013) #24 ENSCPOG00000024404 SH3BP2 (ENSCPOG00000009421) #27 ENSCPOG00000031940 TSGA10 (ENSCPOG00000012778) ENSCPOG00000031612 MGAT4A (ENSCPOG00000013248) UNC50 (ENSCPOG00000009266) COA5 (ENSCPOG00000033235) INPP4A (ENSCPOG00000009253) CNGA3 (ENSCPOG00000021435) ENSCPOG00000040253 ENSCPOG00000010132 TMEM131 (ENSCPOG00000004808) ZAP70 (ENSCPOG00000004804) Hystricomorpha_b ANCESTRAL SPECIES 37 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043.f ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00940000164052 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741.y #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000156391 Long-tailed chinchilla MODERN SPECIES 221 FAM53A (ENSCLAG00000007294) SLBP (ENSCLAG00000008157) TMEM129 (ENSCLAG00000010127) TACC3 (ENSCLAG00000011683) FGFR3 (ENSCLAG00000006986) LETM1 (ENSCLAG00000010785) NSD2 (ENSCLAG00000014450) NELFA (ENSCLAG00000012299) C4orf48 (ENSCLAG00000009344) ENSCLAG00000009488 POLN (ENSCLAG00000010355) HAUS3 (ENSCLAG00000010866) #18 MXD4 (ENSCLAG00000011445) #19 ZFYVE28 (ENSCLAG00000009540) #20 CFAP99 (ENSCLAG00000012930) #21 RNF4 (ENSCLAG00000014072) #22 FAM193A (ENSCLAG00000014296) #24 ENSCLAG00000006931 SH3BP2 (ENSCLAG00000008009) #27 ADD1 (ENSCLAG00000011442) #28 ENSCLAG00000011338 #29 NOP14 (ENSCLAG00000008622) #30 GRK4 (ENSCLAG00000007161) #31 HTT (ENSCLAG00000007604) #32 MSANTD1 (ENSCLAG00000008147) #33 ENSCLAG00000008016 #34 HGFAC (ENSCLAG00000008342) #35 DOK7 (ENSCLAG00000010230) #36 LRPAP1 (ENSCLAG00000007328) #37 CPZ (ENSCLAG00000010243) TRMT44 (ENSCLAG00000008063) Degu MODERN SPECIES 47 SLBP (ENSODEG00000012641) ENSODEG00000011155 ENSODEG00000012973 ENSODEG00000012582 LETM1 (ENSODEG00000012866) NSD2 (ENSODEG00000012080) NELFA (ENSODEG00000011122) C4orf48 (ENSODEG00000011093) ENSODEG00000011723 ENSODEG00000011259 POLN (ENSODEG00000011265) HAUS3 (ENSODEG00000011986) #18 MXD4 (ENSODEG00000011512) #19 ENSODEG00000011568 #20 CFAP99 (ENSODEG00000011882) #21 RNF4 (ENSODEG00000011133) #22 ENSODEG00000010562 FAM193A (ENSODEG00000010949) #24 ENSODEG00000010959 SH3BP2 (ENSODEG00000011814) #27 ADD1 (ENSODEG00000010953) #28 ENSODEG00000011022 #29 NOP14 (ENSODEG00000011223) #30 GRK4 (ENSODEG00000012144) #31 HTT (ENSODEG00000010889) #32 MSANTD1 (ENSODEG00000009931) #33 ENSODEG00000019744 RGS12 (ENSODEG00000011606) #34 HGFAC (ENSODEG00000010427) #35 DOK7 (ENSODEG00000010960) #36 LRPAP1 (ENSODEG00000011862) #37 Naked mole-rat female MODERN SPECIES 1 ENSHGLG00000002082 ENSHGLG00000001108 ENSHGLG00000006663 ENSHGLG00000005955 TMEM129 (ENSHGLG00000046034) ENSHGLG00000004881 FGFR3 (ENSHGLG00000004816) LETM1 (ENSHGLG00000004719) ENSHGLG00000044127 NELFA (ENSHGLG00000004622) ENSHGLG00000020481 ##26 ENSHGLG00000010063 POLN (ENSHGLG00000009000) HAUS3 (ENSHGLG00000051007) #18 ENSHGLG00000047915 RNF4 (ENSHGLG00000046605) #22 ENSHGLG00000006269 ENSHGLG00000037168 TNIP2 (ENSHGLG00000005230) #25 SH3BP2 (ENSHGLG00000005188) #27 ADD1 (ENSHGLG00000005103) #28 ENSHGLG00000005051 #29 GRK4 (ENSHGLG00000016893) #31 ENSHGLG00000048089 HTT (ENSHGLG00000014813) #32 MSANTD1 (ENSHGLG00000015087) #33 ENSHGLG00000016876 #34 ENSHGLG00000016854 #35 DOK7 (ENSHGLG00000018845) #36 ENSHGLG00000019431 #37 ENSHGLG00000041494 Rodentia_B ANCESTRAL SPECIES 19 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Kangaroo rat MODERN SPECIES 390 Slbp (ENSDORG00000003028) ENSDORG00000003030 ENSDORG00000026325 ENSDORG00000009704 ENSDORG00000025862 Letm1 (ENSDORG00000009706) Nsd2 (ENSDORG00000013095) Nelfa (ENSDORG00000013103) Gm1673 (ENSDORG00000009221) ENSDORG00000012646 Poln (ENSDORG00000012647) Haus3 (ENSDORG00000012649) #18 Mxd4 (ENSDORG00000000173) #19 ENSDORG00000026396 #20 Cfap99 (ENSDORG00000025036) #21 Rnf4 (ENSDORG00000006675) #22 Fam193a (ENSDORG00000016576) #24 ENSDORG00000016577 #25 Sh3bp2 (ENSDORG00000010509) #27 Htt (ENSDORG00000003272) #32 ENSDORG00000023495 #28 ENSDORG00000001192 #29 Nop14 (ENSDORG00000001193) #30 ENSDORG00000001194 #31 Msantd1 (ENSDORG00000003277) #33 Rgs12 (ENSDORG00000014704) #34 Hgfac (ENSDORG00000014709) #35 Dok7 (ENSDORG00000014713) #36 Lrpap1 (ENSDORG00000014714) #37 Adra2c (ENSDORG00000029260) Cpz (ENSDORG00000009339) Myomorpha ANCESTRAL SPECIES 19 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Muroidea ANCESTRAL SPECIES 17 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Upper Galilee mountains blind mole rat MODERN SPECIES 1177 Slbp (ENSNGAG00000020799) Tmem129 (ENSNGAG00000017856) Tacc3 (ENSNGAG00000017862) Fgfr3 (ENSNGAG00000015713) Letm1 (ENSNGAG00000000720) Nsd2 (ENSNGAG00000010171) Nelfa (ENSNGAG00000023963) ENSNGAG00000014727 Gm1673 (ENSNGAG00000023348) ENSNGAG00000002900 Poln (ENSNGAG00000022997) Haus3 (ENSNGAG00000014413) #18 Mxd4 (ENSNGAG00000016526) #19 ENSNGAG00000014521 #20 Cfap99 (ENSNGAG00000020586) #21 Rnf4 (ENSNGAG00000018375) #22 Fam193a (ENSNGAG00000021458) #24 Tnip2 (ENSNGAG00000020375) #25 Sh3bp2 (ENSNGAG00000018119) #27 Add1 (ENSNGAG00000013896) #28 ENSNGAG00000004792 #29 ENSNGAG00000019094 Nop14 (ENSNGAG00000023183) #30 Grk4 (ENSNGAG00000019026) #31 Htt (ENSNGAG00000014294) #32 Msantd1 (ENSNGAG00000022576) #33 Rgs12 (ENSNGAG00000019986) #34 Hgfac (ENSNGAG00000016815) #35 Dok7 (ENSNGAG00000018034) #36 Lrpap1 (ENSNGAG00000014620) #37 Muroidea_A ANCESTRAL SPECIES 13 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Cricetidae ANCESTRAL SPECIES 14 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Cricetidae_B ANCESTRAL SPECIES 9 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Northern American deer mouse MODERN SPECIES 1 Nkx1-1 (ENSPEMG00000016893) Fam53a (ENSPEMG00000008959) Slbp (ENSPEMG00000018369) Tmem129 (ENSPEMG00000000690) Tacc3 (ENSPEMG00000012388) Fgfr3 (ENSPEMG00000006894) Letm1 (ENSPEMG00000000609) Nsd2 (ENSPEMG00000017277) Nelfa (ENSPEMG00000016134) Gm1673 (ENSPEMG00000017743) ENSPEMG00000026053 Poln (ENSPEMG00000008981) Mxd4 (ENSPEMG00000015018) #19 Zfyve28 (ENSPEMG00000003088) #20 Cfap99 (ENSPEMG00000000404) #21 Rnf4 (ENSPEMG00000017150) #22 Fam193a (ENSPEMG00000000297) #24 Tnip2 (ENSPEMG00000013340) #25 Sh3bp2 (ENSPEMG00000015767) #27 Add1 (ENSPEMG00000008717) #28 ENSPEMG00000011931 #29 Nop14 (ENSPEMG00000005399) #30 Grk4 (ENSPEMG00000003121) #31 Htt (ENSPEMG00000000805) #32 Msantd1 (ENSPEMG00000028370) #33 Rgs12 (ENSPEMG00000012259) #34 Hgfac (ENSPEMG00000008506) #35 Dok7 (ENSPEMG00000018287) #36 Lrpap1 (ENSPEMG00000019005) #37 ENSPEMG00000030404 Adra2c (ENSPEMG00000007034) Prairie vole MODERN SPECIES 88 Haus3 (ENSMOCG00000011866) #18 Mxd4 (ENSMOCG00000018278) #19 Zfyve28 (ENSMOCG00000013314) #20 Cfap99 (ENSMOCG00000000107) #21 Rnf4 (ENSMOCG00000018129) #22 Fam193a (ENSMOCG00000003768) #24 Tnip2 (ENSMOCG00000009761) #25 Sh3bp2 (ENSMOCG00000016109) #27 Add1 (ENSMOCG00000020050) #28 Mfsd10 (ENSMOCG00000003513) Nop14 (ENSMOCG00000021638) #30 Grk4 (ENSMOCG00000014083) #31 Htt (ENSMOCG00000019391) #32 Msantd1 (ENSMOCG00000016043) #33 Rgs12 (ENSMOCG00000022287) #34 Hgfac (ENSMOCG00000010840) #35 Dok7 (ENSMOCG00000015164) #36 Lrpap1 (ENSMOCG00000001033) #37 Adra2c (ENSMOCG00000006396) Hmx1 (ENSMOCG00000013589) Cricetinae ANCESTRAL SPECIES 9 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00830000128422 #29 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Golden Hamster MODERN SPECIES 632 Fam53a (ENSMAUG00000018409) Slbp (ENSMAUG00000009490) Tmem129 (ENSMAUG00000013066) Tacc3 (ENSMAUG00000008651) Fgfr3 (ENSMAUG00000012735) Letm1 (ENSMAUG00000007831) Nsd2 (ENSMAUG00000015700) Nelfa (ENSMAUG00000022097) Gm1673 (ENSMAUG00000019500) ENSMAUG00000020607 Poln (ENSMAUG00000008534) Haus3 (ENSMAUG00000000818) #18 Mxd4 (ENSMAUG00000014477) #19 ENSMAUG00000016411 #20 Cfap99 (ENSMAUG00000018621) #21 Rnf4 (ENSMAUG00000022006) #22 Fam193a (ENSMAUG00000013458) #24 Tnip2 (ENSMAUG00000000863) #25 Sh3bp2 (ENSMAUG00000014154) #27 Add1 (ENSMAUG00000010417) #28 ENSMAUG00000009757 #29 Nop14 (ENSMAUG00000011891) #30 Grk4 (ENSMAUG00000019885) #31 Htt (ENSMAUG00000016135) #32 Msantd1 (ENSMAUG00000019122) #33 Rgs12 (ENSMAUG00000020471) #34 Hgfac (ENSMAUG00000014240) #35 Dok7 (ENSMAUG00000013714) #36 Lrpap1 (ENSMAUG00000000794) #37 Adra2c (ENSMAUG00000010360) Hmx1 (ENSMAUG00000014298) Chinese hamster chok1gshd MODERN SPECIES 44 ENSCGRG00001009760 Tmem129 (ENSCGRG00001014269) Tacc3 (ENSCGRG00001022858) Fgfr3 (ENSCGRG00001014679) Letm1 (ENSCGRG00001022378) ENSCGRG00001022523 Nsd2 (ENSCGRG00001008668) Nelfa (ENSCGRG00001018745) Gm1673 (ENSCGRG00001020043) Nat8l (ENSCGRG00001023978) Poln (ENSCGRG00001007876) Haus3 (ENSCGRG00001006121) #18 Mxd4 (ENSCGRG00001011783) #19 Zfyve28 (ENSCGRG00001015693) #20 Cfap99 (ENSCGRG00001018964) #21 Rnf4 (ENSCGRG00001022472) #22 Fam193a (ENSCGRG00001011437) #24 Tnip2 (ENSCGRG00001018278) #25 Sh3bp2 (ENSCGRG00001023205) #27 Add1 (ENSCGRG00001008876) #28 ENSCGRG00001023141 #29 Nop14 (ENSCGRG00001009013) #30 Grk4 (ENSCGRG00001011864) #31 Htt (ENSCGRG00001024008) #32 ENSCGRG00001017546 Msantd1 (ENSCGRG00001020279) #33 Rgs12 (ENSCGRG00001009377) #34 Hgfac (ENSCGRG00001011915) #35 Dok7 (ENSCGRG00001018277) #36 Lrpap1 (ENSCGRG00001019166) #37 Adra2c (ENSCGRG00001008328) Murinae ANCESTRAL SPECIES 12 ENSGT00530000063371.A ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00940000164295 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Mus ANCESTRAL SPECIES 14 ENSGT00860000135700 ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00940000164295 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Mus_A ANCESTRAL SPECIES 6 ENSGT00860000135700 ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00940000164295 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Ryukyu mouse MODERN SPECIES 14 MGP_CAROLIEiJ_G0027116 Slbp (MGP_CAROLIEiJ_G0027117) Tmem129 (MGP_CAROLIEiJ_G0027118) Tacc3 (MGP_CAROLIEiJ_G0027119) Fgfr3 (MGP_CAROLIEiJ_G0027120) Letm1 (MGP_CAROLIEiJ_G0027121) Nsd2 (MGP_CAROLIEiJ_G0027122) Nelfa (MGP_CAROLIEiJ_G0027123) MGP_CAROLIEiJ_G0027124 Nat8l (MGP_CAROLIEiJ_G0027125) Poln (MGP_CAROLIEiJ_G0027126) Haus3 (MGP_CAROLIEiJ_G0027127) #18 Mxd4 (MGP_CAROLIEiJ_G0027128) #19 Zfyve28 (MGP_CAROLIEiJ_G0027129) #20 Cfap99 (MGP_CAROLIEiJ_G0027130) #21 Rnf4 (MGP_CAROLIEiJ_G0027131) #22 Fam193a (MGP_CAROLIEiJ_G0027132) #24 Tnip2 (MGP_CAROLIEiJ_G0027133) #25 Sh3bp2 (MGP_CAROLIEiJ_G0027134) #27 Add1 (MGP_CAROLIEiJ_G0027135) #28 Mfsd10 (MGP_CAROLIEiJ_G0027136) Nop14 (MGP_CAROLIEiJ_G0027137) #30 Grk4 (MGP_CAROLIEiJ_G0027138) #31 Htt (MGP_CAROLIEiJ_G0027139) #32 Msantd1 (MGP_CAROLIEiJ_G0027140) #33 Rgs12 (MGP_CAROLIEiJ_G0027141) #34 Hgfac (MGP_CAROLIEiJ_G0027142) #35 Dok7 (MGP_CAROLIEiJ_G0027143) #36 Lrpap1 (MGP_CAROLIEiJ_G0027144) #37 Adra2c (MGP_CAROLIEiJ_G0027145) Hmx1 (MGP_CAROLIEiJ_G0027146) Mus_B ANCESTRAL SPECIES 4 ENSGT00860000135700 ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00940000164295 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 Mouse MODERN SPECIES 14 Fam53a (ENSMUSG00000037339) Slbp (ENSMUSG00000004642) Tmem129 (ENSMUSG00000019295) Tacc3 (ENSMUSG00000037313) Fgfr3 (ENSMUSG00000054252) Letm1 (ENSMUSG00000005299) Nsd2 (ENSMUSG00000057406) Nelfa (ENSMUSG00000029111) Gm1673 (ENSMUSG00000070858) Nat8l (ENSMUSG00000048142) Poln (ENSMUSG00000045102) Haus3 (ENSMUSG00000079555) #18 Mxd4 (ENSMUSG00000037235) #19 Zfyve28 (ENSMUSG00000037224) #20 Cfap99 (ENSMUSG00000109572) #21 Rnf4 (ENSMUSG00000029110) #22 Fam193a (ENSMUSG00000037210) #24 Tnip2 (ENSMUSG00000059866) #25 Sh3bp2 (ENSMUSG00000054520) #27 Add1 (ENSMUSG00000029106) #28 Mfsd10 (ENSMUSG00000001082) Nop14 (ENSMUSG00000036693) #30 Grk4 (ENSMUSG00000052783) #31 Htt (ENSMUSG00000029104) #32 Msantd1 (ENSMUSG00000051246) #33 Rgs12 (ENSMUSG00000029101) #34 Hgfac (ENSMUSG00000029102) #35 Dok7 (ENSMUSG00000044716) #36 Lrpap1 (ENSMUSG00000029103) #37 Adra2c (ENSMUSG00000045318) Hmx1 (ENSMUSG00000067438) Mus_C ANCESTRAL SPECIES 4 ENSGT00860000135700 ENSGT00390000008738 ENSGT00390000013284 ENSGT00940000158858 ENSGT00940000159880 ENSGT00950000183167.a.b.a ENSGT00940000157429 ENSGT00390000005342 ENSGT00390000013043 ENSGT00950000182932.B ENSGT00940000159015 ENSGT00390000011904 #18 ENSGT00940000160120 #19 ENSGT00940000157217 #20 ENSGT00500000045231 #21 ENSGT00390000010318 #22 ENSGT00390000000973.a.b #24 ENSGT00510000046908.a.b #25 ENSGT00390000002216 #27 ENSGT00940000158581 #28 ENSGT00940000164295 ENSGT00390000017459 #30 ENSGT00940000160151 #31 ENSGT00390000015863 #32 ENSGT00390000002245 #33 ENSGT00940000159741 #34 ENSGT00940000159778 #35 ENSGT00390000015386 #36 ENSGT00390000004855 #37 ENSGT00940000161707.b ENSGT00940000162580 spretus MODERN SPECIES 14 MGP_SPRETEiJ_G0028112 Slbp (MGP_SPRETEiJ_G0028113) Tmem129 (MGP_SPRETEiJ_G0028114) Tacc3 (MGP_SPRETEiJ_G0028115) Fgfr3 (MGP_SPRETEiJ_G0028116) Letm1 (MGP_SPRETEiJ_G0028117) Nsd2 (MGP_SPRETEiJ_G0028118) Nelfa (MGP_SPRETEiJ_G0028119) MGP_SPRETEiJ_G0028120 Nat8l (MGP_SPRETEiJ_G0028121) Poln (MGP_SPRETEiJ_G0028122) Haus3 (MGP_SPRETEiJ_G0028123) #18 Mxd4 (MGP_SPRETEiJ_G0028124) #19 Zfyve28 (MGP_SPRETEiJ_G0028125) #20 Cfap99 (MGP_SPRETEiJ_G0028126) #21 Rnf4 (MGP_SPRETEiJ_G0028127) #22 Fam193a (MGP_SPRETEiJ_G0028128) #24 Tnip2 (MGP_SPRETEiJ_G0028129) #25 Sh3bp2 (MGP_SPRETEiJ_G0028130) #27 Add1 (MGP_SPRETEiJ_G0028131) #28 Mfsd10 (MGP_SPRETEiJ_G0028132) Nop14 (MGP_SPRETEiJ_G0028133) #30 MGP_SPRETEiJ_G0028134 #31 Htt (MGP_SPRETEiJ_G0028135) #32 Msantd1 (MGP_SPRETEiJ_G0028136) #33 Rgs12 (MGP_SPRETEiJ_G0028137) #34 Hgfac (MGP_SPRETEiJ_G0028138) #35 Dok7 (MGP_SPRETEiJ_G0028139) #36 Lrpap1 (MGP_SPRETEiJ_G0028140) #37 Adra2c (MGP_SPRETEiJ_G0028141) Hmx1 (MGP_SPRETEiJ_G0028142) Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 3132 Tmem129 (ENSMSIG00000020453) ENSMSIG00000020463 Fgfr3 (ENSMSIG00000020478) Letm1 (ENSMSIG00000020902) Nsd2 (ENSMSIG00000020943) Nelfa (ENSMSIG00000021131) ENSMSIG00000021161 Nat8l (ENSMSIG00000021182) Poln (ENSMSIG00000021195) Haus3 (ENSMSIG00000021389) #18 ENSMSIG00000021408 #19 ENSMSIG00000021448 Zfyve28 (ENSMSIG00000021454) #20 Cfap99 (ENSMSIG00000021491) #21 ENSMSIG00000021509 ENSMSIG00000021525 #22 Fam193a (ENSMSIG00000021548) #24 Tnip2 (ENSMSIG00000021599) #25 Sh3bp2 (ENSMSIG00000021641) #27 Add1 (ENSMSIG00000021740) #28 Mfsd10 (ENSMSIG00000022303) Nop14 (ENSMSIG00000022337) #30 Grk4 (ENSMSIG00000022371) #31 Htt (ENSMSIG00000022431) #32 Msantd1 (ENSMSIG00000022619) #33 Rgs12 (ENSMSIG00000022662) #34 Hgfac (ENSMSIG00000022868) #35 Dok7 (ENSMSIG00000022905) #36 Lrpap1 (ENSMSIG00000022985) #37 Adra2c (ENSMSIG00000023019) ENSMSIG00000023027 Steppe mouse MODERN SPECIES 3173 ENSMSIG00000028950 ENSMSIG00000028953 H60c (ENSMSIG00000028958) ENSMSIG00000028966 ENSMSIG00000028971 Plekhg1 (ENSMSIG00000028989) Mthfd1l (ENSMSIG00000029009) ENSMSIG00000029049 #22 Akap12 (ENSMSIG00000029068) ENSMSIG00000029085 Zbtb2 (ENSMSIG00000029096) Rmnd1 (ENSMSIG00000029100) Armt1 (ENSMSIG00000029112) Ccdc170 (ENSMSIG00000029125) Esr1 (ENSMSIG00000029132) Syne1 (ENSMSIG00000029148) Myct1 (ENSMSIG00000029269) Vip (ENSMSIG00000029272) Shrew mouse MODERN SPECIES 4 MGP_PahariEiJ_G0016900 Slbp (MGP_PahariEiJ_G0016901) Tmem129 (MGP_PahariEiJ_G0016902) MGP_PahariEiJ_G0016903 Fgfr3 (MGP_PahariEiJ_G0016904) MGP_PahariEiJ_G0016905 Nsd2 (MGP_PahariEiJ_G0016906) Nelfa (MGP_PahariEiJ_G0016907) MGP_PahariEiJ_G0016908 Nat8l (MGP_PahariEiJ_G0016909) Poln (MGP_PahariEiJ_G0016910) Haus3 (MGP_PahariEiJ_G0016911) #18 Mxd4 (MGP_PahariEiJ_G0016912) #19 Zfyve28 (MGP_PahariEiJ_G0016913) #20 Cfap99 (MGP_PahariEiJ_G0016914) #21 MGP_PahariEiJ_G0016915 #22 Fam193a (MGP_PahariEiJ_G0016916) #24 Tnip2 (MGP_PahariEiJ_G0016917) #25 Sh3bp2 (MGP_PahariEiJ_G0016918) #27 Add1 (MGP_PahariEiJ_G0016919) #28 Mfsd10 (MGP_PahariEiJ_G0016920) Nop14 (MGP_PahariEiJ_G0016921) #30 Grk4 (MGP_PahariEiJ_G0016922) #31 Htt (MGP_PahariEiJ_G0016923) #32 Msantd1 (MGP_PahariEiJ_G0016924) #33 Rgs12 (MGP_PahariEiJ_G0016925) #34 Hgfac (MGP_PahariEiJ_G0016926) #35 Dok7 (MGP_PahariEiJ_G0016927) #36 Lrpap1 (MGP_PahariEiJ_G0016928) #37 Adra2c (MGP_PahariEiJ_G0016929) Hmx1 (MGP_PahariEiJ_G0016930) Rat MODERN SPECIES 5 Nkx1-1 (ENSRNOG00000005113) Fam53a (ENSRNOG00000017548) Slbp (ENSRNOG00000037162) Tmem129 (ENSRNOG00000017329) Tacc3 (ENSRNOG00000017259) Fgfr3 (ENSRNOG00000016818) Letm1 (ENSRNOG00000016427) Nsd2 (ENSRNOG00000038140) Nelfa (ENSRNOG00000015474) RGD1560394 (ENSRNOG00000065022) Nat8l (ENSRNOG00000049351) Poln (ENSRNOG00000069005) Mxd4 (ENSRNOG00000015033) #19 Zfyve28 (ENSRNOG00000014874) #20 Cfap99 (ENSRNOG00000058434) #21 Rnf4 (ENSRNOG00000013930) #22 Fam193a (ENSRNOG00000013832) #24 Tnip2 (ENSRNOG00000013805) #25 Sh3bp2 (ENSRNOG00000013747) #27 Add1 (ENSRNOG00000013039) #28 Mfsd10 (ENSRNOG00000012534) Nop14 (ENSRNOG00000012147) #30 Grk4 (ENSRNOG00000011847) #31 Htt (ENSRNOG00000011073) #32 Msantd1 (ENSRNOG00000064777) #33 LOC108352780 (ENSRNOG00000030162) Rgs12 (ENSRNOG00000030568) #34 Hgfac (ENSRNOG00000009572) #35 Dok7 (ENSRNOG00000022419) #36 Lrpap1 (ENSRNOG00000009313) #37 Adra2c (ENSRNOG00000009299) Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 41 ENSJJAG00000018132 Pcnx4 (ENSJJAG00000010856) Lrrc9 (ENSJJAG00000018313) ENSJJAG00000002864 ENSJJAG00000018222 L3hypdh (ENSJJAG00000022907) Gpr135 (ENSJJAG00000022088) Daam1 (ENSJJAG00000018690) Dact1 (ENSJJAG00000023135) 2700049A03Rik (ENSJJAG00000003167) Timm9 (ENSJJAG00000007980) Arid4a (ENSJJAG00000016742) ENSJJAG00000001749 Actr10 (ENSJJAG00000018421) Armh4 (ENSJJAG00000017470) ENSJJAG00000013603 #22 Slc35f4 (ENSJJAG00000001648) ccdc198 (ENSJJAG00000008303) Naa30 (ENSJJAG00000024025) Ap5m1 (ENSJJAG00000011637) Exoc5 (ENSJJAG00000024175) Otx2 (ENSJJAG00000012995) Tmem260 (ENSJJAG00000012902) Peli2 (ENSJJAG00000003968) Ktn1 (ENSJJAG00000013869) Tbpl2 (ENSJJAG00000003838) Atg14 (ENSJJAG00000000490) Fbxo34 (ENSJJAG00000003125) ENSJJAG00000018716 Lgals3 (ENSJJAG00000011463) ENSJJAG00000017492 Lesser Egyptian jerboa MODERN SPECIES 216 Ptpa (ENSJJAG00000019117) Ier5l (ENSJJAG00000018437) Ntmt1 (ENSJJAG00000018216) Asb6 (ENSJJAG00000005860) Prrx2 (ENSJJAG00000001173) Ptges (ENSJJAG00000022123) Tor1b (ENSJJAG00000021809) Tor1a (ENSJJAG00000020493) BC005624 (ENSJJAG00000019276) ENSJJAG00000018480 Fnbp1 (ENSJJAG00000014760) Gpr107 (ENSJJAG00000011368) ENSJJAG00000006586 Hmcn2 (ENSJJAG00000015957) Ass1 (ENSJJAG00000012217) ENSJJAG00000011740 #22 Fubp3 (ENSJJAG00000009992) Prdm12 (ENSJJAG00000005424) Exosc2 (ENSJJAG00000003188) ENSJJAG00000002376 ENSJJAG00000001721 Qrfp (ENSJJAG00000000766) Fibcd1 (ENSJJAG00000000435) Lamc3 (ENSJJAG00000024108) Aif1l (ENSJJAG00000016566) Lesser Egyptian jerboa MODERN SPECIES 58 ENSJJAG00000019010 ENSJJAG00000020549 ENSJJAG00000015175 Tacc3 (ENSJJAG00000015964) Fgfr3 (ENSJJAG00000001873) Letm1 (ENSJJAG00000024090) Nsd2 (ENSJJAG00000012992) Nelfa (ENSJJAG00000024237) Gm1673 (ENSJJAG00000006076) Nat8l (ENSJJAG00000024226) Poln (ENSJJAG00000012540) Haus3 (ENSJJAG00000013628) #18 ENSJJAG00000017036 #19 ENSJJAG00000000555 #20 Cfap99 (ENSJJAG00000019360) #21 ENSJJAG00000014107 #22 ENSJJAG00000000617 Fam193a (ENSJJAG00000013646) #24 Tnip2 (ENSJJAG00000021336) #25 Sh3bp2 (ENSJJAG00000022545) #27 Add1 (ENSJJAG00000011333) #28 ENSJJAG00000019357 #29 Nop14 (ENSJJAG00000006861) #30 Grk4 (ENSJJAG00000012324) #31 Htt (ENSJJAG00000014310) #32 Msantd1 (ENSJJAG00000015075) #33 ENSJJAG00000022086 #34 ENSJJAG00000022095 #34 Hgfac (ENSJJAG00000017476) #35 Dok7 (ENSJJAG00000017296) #36 Lrpap1 (ENSJJAG00000024126) #37