Mus	ANCESTRAL SPECIES	11	ENSGT00940000163803	ENSGT00940000162388.B #9	ENSGT00940000162388.A #10	ENSGT00940000164920 #11	ENSGT00940000162202.A #12	ENSGT00940000162202.B #13	ENSGT00940000162121 #14	ENSGT00730000111596 #15	ENSGT01100000263574.a.f.a.f ##16	ENSGT01100000263574.a.f.a.e.a #16	ENSGT01100000263574.a.f.a.e.b #17	ENSGT00390000002978 #18	ENSGT00940000159366 #19	ENSGT00940000155440.d #20	ENSGT00940000155489.b.f #21	ENSGT00940000155224 #22	ENSGT00940000161281 #23	ENSGT00940000155473 #24	ENSGT00940000159065 #25	ENSGT00390000002307 #26	ENSGT00940000159931 #27	ENSGT00530000063825.B #28	ENSGT00940000156749 #29	ENSGT00390000002231.d.a #30	ENSGT00950000183146.a.a #31	ENSGT00940000158917 #32	ENSGT00940000155486 #33	ENSGT00940000160716 #34	ENSGT00950000183205.b.a.b.a.b #35	ENSGT00390000016138 #36	ENSGT00940000158969
Shrew mouse	MODERN SPECIES	8	Or11m3 (MGP_PahariEiJ_G0020237) #7	Lalba (MGP_PahariEiJ_G0020236) #8	Or8s8 (MGP_PahariEiJ_G0020235) #9	Or8s10 (MGP_PahariEiJ_G0020234) #10	MGP_PahariEiJ_G0020233 #11	Or8s2 (MGP_PahariEiJ_G0020232) #12	Or8s5 (MGP_PahariEiJ_G0020231) #13	Zfp641 (MGP_PahariEiJ_G0020230) #14	H1f7 (MGP_PahariEiJ_G0020229) #15	MGP_PahariEiJ_G0020228 #16	MGP_PahariEiJ_G0020227 #17	Ccdc184 (MGP_PahariEiJ_G0020226) #18	Asb8 (MGP_PahariEiJ_G0020225) #19	Pfkm (MGP_PahariEiJ_G0020224) #20	Senp1 (MGP_PahariEiJ_G0020223) #21	Col2a1 (MGP_PahariEiJ_G0020222) #22	Tmem106c (MGP_PahariEiJ_G0020221) #23	Vdr (MGP_PahariEiJ_G0020220) #24	Hdac7 (MGP_PahariEiJ_G0020219) #25	Slc48a1 (MGP_PahariEiJ_G0020218) #26	Rapgef3 (MGP_PahariEiJ_G0020217) #27	Endou (MGP_PahariEiJ_G0020216) #28	Rpap3 (MGP_PahariEiJ_G0020215) #29	Pced1b (MGP_PahariEiJ_G0020214) #30	Amigo2 (MGP_PahariEiJ_G0020213) #31	Slc38a4 (MGP_PahariEiJ_G0020212) #32	Slc38a2 (MGP_PahariEiJ_G0020211) #33	Slc38a1 (MGP_PahariEiJ_G0020210) #34	Scaf11 (MGP_PahariEiJ_G0020209) #35	Arid2 (MGP_PahariEiJ_G0020208) #36	MGP_PahariEiJ_G0020207 #37
Mus_A	ANCESTRAL SPECIES	13	ENSGT00940000163803	ENSGT00940000162388.B #9	ENSGT00940000162388.A #10	ENSGT00940000164920 #11	ENSGT00940000162202.A #12	ENSGT00940000162202.B #13	ENSGT00940000162121 #14	ENSGT00730000111596 #15	ENSGT01100000263574.a.f.a.e.b.a.a #17	ENSGT01100000263574.a.f.a.f ##16	ENSGT01100000263574.a.f.a.e.b.a.b #17	ENSGT00390000002978 #18	ENSGT00940000159366 #19	ENSGT00940000155440.d #20	ENSGT00940000155489.b.f #21	ENSGT00940000155224 #22	ENSGT00940000161281 #23	ENSGT00940000155473 #24	ENSGT00940000159065 #25	ENSGT00390000002307 #26	ENSGT00940000159931 #27	ENSGT00530000063825.B #28	ENSGT00940000156749.c #29	ENSGT00390000002231.d.a #30	ENSGT00950000183146.a.a #31	ENSGT00940000158917 #32	ENSGT00940000155486 #33	ENSGT00940000160716 #34	ENSGT00950000183205.b.a.b.a.b #35	ENSGT00390000016138 #36	ENSGT00940000158969
Mus_B	ANCESTRAL SPECIES	12	ENSGT00940000163803	ENSGT00940000162388.B #9	ENSGT00940000162388.A #10	ENSGT00940000164920 #11	ENSGT00940000162202.A #12	ENSGT00940000162202.B #13	ENSGT00940000159881.b	ENSGT00940000162121 #14	ENSGT00730000111596 #15	ENSGT01100000263574.a.f.a.f ##16	ENSGT01100000263574.a.f.a.e.b.a.b #17	ENSGT00390000002978 #18	ENSGT00940000159366 #19	ENSGT00940000155440.d #20	ENSGT00940000155489.b.f #21	ENSGT00940000155224 #22	ENSGT00940000161281 #23	ENSGT00940000155473 #24	ENSGT00940000159065 #25	ENSGT00390000002307 #26	ENSGT00940000159931 #27	ENSGT00530000063825.B #28	ENSGT00940000156749.c #29	ENSGT00390000002231.d.a #30	ENSGT00950000183146.a.a #31	ENSGT00940000158917 #32	ENSGT00940000155486 #33	ENSGT00940000160716 #34	ENSGT00950000183205.b.a.b.a.b #35	ENSGT00390000016138 #36	ENSGT00940000158969
Mus_C	ANCESTRAL SPECIES	17	ENSGT00940000163803	ENSGT00940000162388.B #9	ENSGT00940000162388.A #10	ENSGT00940000164920 #11	ENSGT00940000162202.A #12	ENSGT00940000162202.B #13	ENSGT00940000159881.b	ENSGT00940000162121 #14	ENSGT00730000111596 #15	ENSGT01100000263574.a.f.a.f ##16	ENSGT01100000263574.a.f.a.e.b.a.b #17	ENSGT00390000002978 #18	ENSGT00940000159366 #19	ENSGT00940000155440.d #20	ENSGT00940000155489.b.f #21	ENSGT00940000155224 #22	ENSGT00940000161281 #23	ENSGT00940000155473 #24	ENSGT00940000159065 #25	ENSGT00390000002307 #26	ENSGT00940000159931 #27	ENSGT00530000063825.B #28	ENSGT00940000156749.c #29	ENSGT00390000002231.d.a #30	ENSGT00950000183146.a.a #31	ENSGT00940000158917 #32	ENSGT00940000155486 #33	ENSGT00940000160716 #34	ENSGT00950000183205.b.a.b.a.b #35	ENSGT00390000016138 #36	ENSGT00940000158969
Steppe mouse	MODERN SPECIES	3092	Or11m3 (ENSMSIG00000000513) #7	Lalba (ENSMSIG00000000500) #8	ENSMSIG00000000476	Or8s8 (ENSMSIG00000000461) #9	Or8s2 (ENSMSIG00000000448) #12	Or8s5 (ENSMSIG00000000437) #13	ENSMSIG00000000424	ENSMSIG00000000412	Zfp641 (ENSMSIG00000000347) #14	H1f7 (ENSMSIG00000000314) #15	Or10ad1b (ENSMSIG00000000298) ##16	Ccdc184 (ENSMSIG00000000285) #18	Asb8 (ENSMSIG00000000221) #19	Pfkm (ENSMSIG00000000111) #20	Senp1 (ENSMSIG00000030788) #21	Col2a1 (ENSMSIG00000030745) #22	Tmem106c (ENSMSIG00000030742) #23
spretus	MODERN SPECIES	6	Lalba (MGP_SPRETEiJ_G0021130) #8	Or8s8 (MGP_SPRETEiJ_G0021129) #9	Or8s10 (MGP_SPRETEiJ_G0021128) #10	MGP_SPRETEiJ_G0021127 #11	Or8s2 (MGP_SPRETEiJ_G0021126) #12	Or8s5 (MGP_SPRETEiJ_G0021125) #13	MGP_SPRETEiJ_G0021124	Zfp641 (MGP_SPRETEiJ_G0021123) #14	H1f7 (MGP_SPRETEiJ_G0021122) #15	MGP_SPRETEiJ_G0021121 #17	MGP_SPRETEiJ_G0021120 #17	Ccdc184 (MGP_SPRETEiJ_G0021119) #18	Asb8 (MGP_SPRETEiJ_G0021118) #19	Pfkm (MGP_SPRETEiJ_G0021117) #20	Senp1 (MGP_SPRETEiJ_G0021116) #21	Col2a1 (MGP_SPRETEiJ_G0021115) #22	Tmem106c (MGP_SPRETEiJ_G0021114) #23	Vdr (MGP_SPRETEiJ_G0021113) #24	Hdac7 (MGP_SPRETEiJ_G0021112) #25	Slc48a1 (MGP_SPRETEiJ_G0021111) #26	Rapgef3 (MGP_SPRETEiJ_G0021110) #27	MGP_SPRETEiJ_G0021109 #28	Rpap3 (MGP_SPRETEiJ_G0021108) #29	Pced1b (MGP_SPRETEiJ_G0021107) #30	Amigo2 (MGP_SPRETEiJ_G0021106) #31	Slc38a4 (MGP_SPRETEiJ_G0021105) #32	MGP_SPRETEiJ_G0021104	Slc38a2 (MGP_SPRETEiJ_G0021103) #33	Slc38a1 (MGP_SPRETEiJ_G0021102) #34	Scaf11 (MGP_SPRETEiJ_G0021101) #35	Arid2 (MGP_SPRETEiJ_G0021100) #36
Mouse	MODERN SPECIES	6	Or8s8 (ENSMUSG00000032987) #9	Or8s10 (ENSMUSG00000063780) #10	Or8s2 (ENSMUSG00000056184) #12	Or8s5 (ENSMUSG00000051793) #13	Or8s16 (ENSMUSG00000062037)	Zfp641 (ENSMUSG00000022987) #14	H1f7 (ENSMUSG00000048077) #15	Or10ad1b (ENSMUSG00000059460) ##16	Or10ad1 (ENSMUSG00000090129) #16	Gm44579 (ENSMUSG00000108748)	Or10ad1c (ENSMUSG00000075427) #17	Ccdc184 (ENSMUSG00000029875) #18	Asb8 (ENSMUSG00000048175) #19	Pfkm (ENSMUSG00000033065) #20	Senp1 (ENSMUSG00000033075) #21	Col2a1 (ENSMUSG00000022483) #22	Tmem106c (ENSMUSG00000052369) #23	Vdr (ENSMUSG00000022479) #24	Hdac7 (ENSMUSG00000022475) #25	Slc48a1 (ENSMUSG00000081534) #26	Rapgef3 (ENSMUSG00000022469) #27	Endou (ENSMUSG00000022468) #28	Rpap3 (ENSMUSG00000022466) #29	Pced1b (ENSMUSG00000044250) #30	Amigo2 (ENSMUSG00000048218) #31	Slc38a4 (ENSMUSG00000022464) #32	Slc38a2 (ENSMUSG00000022462) #33	Slc38a1 (ENSMUSG00000023169) #34	Scaf11 (ENSMUSG00000033228) #35	Arid2 (ENSMUSG00000033237) #36	Ano6 (ENSMUSG00000064210)
Ryukyu mouse	MODERN SPECIES	6	Or11m3 (MGP_CAROLIEiJ_G0020234) #7	Lalba (MGP_CAROLIEiJ_G0020233) #8	Or8s8 (MGP_CAROLIEiJ_G0020232) #9	Or8s10 (MGP_CAROLIEiJ_G0020231) #10	MGP_CAROLIEiJ_G0020230 #11	Or8s2 (MGP_CAROLIEiJ_G0020229) #12	Or8s5 (MGP_CAROLIEiJ_G0020228) #13	Zfp641 (MGP_CAROLIEiJ_G0020227) #14	H1f7 (MGP_CAROLIEiJ_G0020226) #15	MGP_CAROLIEiJ_G0020225 #17	MGP_CAROLIEiJ_G0020224 #16	Ccdc184 (MGP_CAROLIEiJ_G0020223) #18	Asb8 (MGP_CAROLIEiJ_G0020222) #19	Pfkm (MGP_CAROLIEiJ_G0020221) #20	Senp1 (MGP_CAROLIEiJ_G0020220) #21	Col2a1 (MGP_CAROLIEiJ_G0020219) #22	Tmem106c (MGP_CAROLIEiJ_G0020218) #23	Vdr (MGP_CAROLIEiJ_G0020217) #24	Hdac7 (MGP_CAROLIEiJ_G0020216) #25	Slc48a1 (MGP_CAROLIEiJ_G0020215) #26	Rapgef3 (MGP_CAROLIEiJ_G0020214) #27	MGP_CAROLIEiJ_G0020213 #28	Rpap3 (MGP_CAROLIEiJ_G0020212) #29	Pced1b (MGP_CAROLIEiJ_G0020211) #30	Amigo2 (MGP_CAROLIEiJ_G0020210) #31	Slc38a4 (MGP_CAROLIEiJ_G0020209) #32	MGP_CAROLIEiJ_G0020208	Slc38a2 (MGP_CAROLIEiJ_G0020207) #33	Slc38a1 (MGP_CAROLIEiJ_G0020206) #34	Scaf11 (MGP_CAROLIEiJ_G0020205) #35	Arid2 (MGP_CAROLIEiJ_G0020204) #36