Rodentia_B	ANCESTRAL SPECIES	26	ENSGT00940000157922	ENSGT00940000158393	ENSGT00640000091558	ENSGT00390000007159	ENSGT00390000016951	ENSGT00940000155189 #11	ENSGT01020000230394.e.b.a #12	ENSGT00940000160900 #13	ENSGT01030000234549.a.a.a.a.a.b.b #15	ENSGT00390000001016.b #16	ENSGT00530000063687.a #17	ENSGT00390000014874 #18	ENSGT00940000153973.c.a.a ##19	ENSGT00390000017740.a.b #20	ENSGT00390000017530 #21	ENSGT00940000156084 #22	ENSGT00950000183077.a.b #23	ENSGT00390000003839 #24	ENSGT00390000013266 #25	ENSGT00940000158273 #26	ENSGT00940000159798 #27	ENSGT00940000156062 #29	ENSGT00390000000616 #30	ENSGT00390000003282.B #31	ENSGT00390000017509 #33	ENSGT00940000160690	ENSGT00940000156027	ENSGT00940000157569	ENSGT00940000161461	ENSGT00940000153393.B	ENSGT00390000004064
Myomorpha	ANCESTRAL SPECIES	36	ENSGT00940000157922	ENSGT00940000158393	ENSGT00640000091558	ENSGT00390000007159	ENSGT00390000016951	ENSGT00940000155189 #11	ENSGT01020000230394.e.b.a #12	ENSGT00940000160900 #13	ENSGT01030000234549.a.a.a.a.a.b.b #15	ENSGT00390000001016.b #16	ENSGT00530000063687.a #17	ENSGT00390000014874 #18	ENSGT00940000153973.c.a.a ##19	ENSGT00390000017740.a.b #20	ENSGT00390000017530 #21	ENSGT00940000156084 #22	ENSGT00950000183077.a.b #23	ENSGT00390000003839 #24	ENSGT00390000013266 #25	ENSGT00940000158273 #26	ENSGT00940000159798 #27	ENSGT00940000156062 #29	ENSGT00390000000616 #30	ENSGT00390000003282.B #31	ENSGT00390000017509 #33	ENSGT00940000160690	ENSGT00940000156027	ENSGT00940000157569	ENSGT00940000161461	ENSGT00940000153393.B	ENSGT00390000004064
Muroidea	ANCESTRAL SPECIES	37	ENSGT00940000157922	ENSGT00940000158393	ENSGT00640000091558	ENSGT00390000007159	ENSGT00390000016951	ENSGT00940000155189 #11	ENSGT01020000230394.e.b.a #12	ENSGT00940000160900 #13	ENSGT01030000234549.a.a.a.a.a.b.b #15	ENSGT00390000001016.b #16	ENSGT00530000063687.a #17	ENSGT00390000014874 #18	ENSGT00940000153973.c.a.a ##19	ENSGT00390000017740.a.b #20	ENSGT00390000017530 #21	ENSGT00940000156084 #22	ENSGT00950000183077.a.b #23	ENSGT00390000003839 #24	ENSGT00390000013266 #25	ENSGT00940000158273 #26	ENSGT00940000159798 #27	ENSGT00940000156062 #29	ENSGT00390000000616 #30	ENSGT00390000003282.B #31	ENSGT00390000017509 #33	ENSGT00940000160690	ENSGT00940000156027	ENSGT00940000157569	ENSGT00940000161461	ENSGT00940000153393.B	ENSGT00390000004064
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT01060000248581.D.a.b.a.b	ENSGT00940000156111	ENSGT00940000158282 #7	ENSGT00940000155716 #8	ENSGT00940000153997.b.a.a #9	ENSGT00940000155189 #11	ENSGT01020000230394.e.b.a #12	ENSGT00940000160900 #13	ENSGT01030000234549.a.a.a.a.a.b.b #15	ENSGT00390000001016.b #16	ENSGT00530000063687.a #17	ENSGT00390000014874 #18	ENSGT00940000153973.c.a.a ##19	ENSGT00390000017740.a.b #20	ENSGT00390000017530 #21	ENSGT00940000156084 #22	ENSGT00950000183077.a.b #23	ENSGT00390000003839 #24	ENSGT00390000013266 #25	ENSGT00940000158273 #26	ENSGT00940000159798 #27	ENSGT00940000156062 #29	ENSGT00390000000616 #30	ENSGT00390000003282.B #31	ENSGT00390000017509 #33	ENSGT00940000160690	ENSGT00940000156027	ENSGT00940000157569	ENSGT00940000161461	ENSGT00940000153393.B	ENSGT00390000004064
Murinae	ANCESTRAL SPECIES	4	ENSGT01060000248581.D.a.b.a.b	ENSGT00940000156111	ENSGT00940000158282 #7	ENSGT00940000155716 #8	ENSGT00940000153997.b.a.a #9	ENSGT00940000155189 #11	ENSGT01020000230394.e.b.a #12	ENSGT00940000160900 #13	ENSGT01030000234549.a.a.a.a.a.b.b #15	ENSGT00390000001016.b #16	ENSGT00530000063687.a #17	ENSGT00390000014874 #18	ENSGT00940000153973.c.a.a ##19	ENSGT00390000017740.a.b #20	ENSGT00390000017530 #21	ENSGT00940000156084 #22	ENSGT00950000183077.a.b #23	ENSGT00390000003839 #24	ENSGT00390000013266 #25	ENSGT00940000158273 #26	ENSGT00940000159798 #27	ENSGT00940000156062 #29	ENSGT00390000000616 #30	ENSGT00390000003282.B #31	ENSGT00390000017509 #33	ENSGT00940000160690	ENSGT00940000156027	ENSGT00940000157569	ENSGT00940000161461	ENSGT00940000153393.B	ENSGT00390000004064
Mus	ANCESTRAL SPECIES	12	ENSGT01060000248581.D.a.b.a.b	ENSGT00940000156111	ENSGT00940000158282 #7	ENSGT00940000155716 #8	ENSGT00940000153997.b.a.a #9	ENSGT00940000155189 #11	ENSGT01020000230394.e.b.a #12	ENSGT00940000160900 #13	ENSGT01030000234549.a.a.a.a.a.b.b #15	ENSGT00390000001016.b #16	ENSGT00530000063687.a #17	ENSGT00390000014874 #18	ENSGT00940000153973.c.a.a ##19	ENSGT00390000017740.a.b #20	ENSGT00390000017530 #21	ENSGT00940000156084 #22	ENSGT00950000183077.a.b #23	ENSGT00390000003839 #24	ENSGT00390000013266 #25	ENSGT00940000158273 #26	ENSGT00940000159798 #27	ENSGT00940000156062 #29	ENSGT00390000000616 #30	ENSGT00390000003282.B #31	ENSGT00390000017509 #33	ENSGT00940000160690	ENSGT00940000156027	ENSGT00940000157569	ENSGT00940000161461	ENSGT00940000153393.B	ENSGT00390000004064
Mus_A	ANCESTRAL SPECIES	7	ENSGT00940000156111	ENSGT00940000158282 #7	ENSGT00940000155716.h ##8	ENSGT00940000155716.g #8	ENSGT00940000153997.b.a.a #9	ENSGT00940000155189 #11	ENSGT01020000230394.e.b.a #12	ENSGT00940000160900 #13	ENSGT01030000234549.a.a.a.a.a.b.b #15	ENSGT00390000001016.b #16	ENSGT00530000063687.a #17	ENSGT00390000014874 #18	ENSGT00940000153973.c.a.a ##19	ENSGT00390000017740.a.b #20	ENSGT00390000017530 #21	ENSGT00940000156084 #22	ENSGT00950000183077.a.b #23	ENSGT00390000003839 #24	ENSGT00390000013266 #25	ENSGT00940000158273 #26	ENSGT00940000159798 #27	ENSGT00940000156062 #29	ENSGT00390000000616 #30	ENSGT00390000003282.B #31	ENSGT00390000017509 #33	ENSGT00940000160690	ENSGT00940000156027	ENSGT00940000157569	ENSGT00940000161461	ENSGT00940000153393.B	ENSGT00390000004064
Mus_B	ANCESTRAL SPECIES	15	ENSGT00940000158282 #7	ENSGT00940000155716.h ##8	ENSGT00940000155716.g #8	ENSGT00940000153997.b.a.a #9	ENSGT00940000155189 #11	ENSGT01020000230394.e.b.a #12	ENSGT00940000160900 #13	ENSGT01030000234549.a.a.a.a.a.b.b #15	ENSGT00390000001016.b #16	ENSGT00530000063687.a #17	ENSGT00390000014874 #18	ENSGT00940000153973.c.a.b.b ##19	ENSGT00940000153973.c.a.a ##19	ENSGT00390000017740.a.b #20	ENSGT00390000017530 #21	ENSGT00940000156084 #22	ENSGT00950000183077.a.b #23	ENSGT00390000003839 #24	ENSGT00390000013266 #25	ENSGT00940000158273 #26	ENSGT00940000159798 #27	ENSGT00940000156062 #29	ENSGT00390000000616 #30	ENSGT00390000003282.B #31	ENSGT00390000017509 #33	ENSGT00940000160690	ENSGT00940000156027	ENSGT00940000157569	ENSGT00940000161461	ENSGT00940000153393.B	ENSGT00390000004064
Mus_C	ANCESTRAL SPECIES	18	ENSGT00940000156111	ENSGT00940000158282 #7	ENSGT00940000155716.h ##8	ENSGT00940000155716.g #8	ENSGT00940000153997.b.a.a #9	ENSGT00940000155189 #11	ENSGT01020000230394.e.b.a #12	ENSGT00940000160900 #13	ENSGT01030000234549.a.a.a.a.a.b.b #15	ENSGT00390000001016.b #16	ENSGT00530000063687.a #17	ENSGT00390000014874 #18	ENSGT00940000153973.c.a.a ##19	ENSGT00390000017740.a.b #20	ENSGT00390000017530 #21	ENSGT00940000156084 #22	ENSGT00950000183077.a.b #23	ENSGT00390000003839 #24	ENSGT00390000013266 #25	ENSGT00940000158273 #26	ENSGT00940000159798 #27	ENSGT00940000156062 #29	ENSGT00390000000616 #30	ENSGT00390000003282.B #31	ENSGT00390000017509 #33	ENSGT00940000160690	ENSGT00940000156027	ENSGT00940000157569	ENSGT00940000161461	ENSGT00940000153393.B	ENSGT00390000004064
Steppe mouse	MODERN SPECIES	3022	Marchf8 (ENSMSIG00000002032) #7	Zfand4 (ENSMSIG00000001904) #8	Washc2 (ENSMSIG00000001796) #9	ENSMSIG00000001776 #10	Tmcc1 (ENSMSIG00000001659) #11	ENSMSIG00000001422 #12	H1f8 (ENSMSIG00000001367) #13	ENSMSIG00000001359 #14	Rho (ENSMSIG00000001309) #15	Ift122 (ENSMSIG00000000881) #16	Mbd4 (ENSMSIG00000000793) #17	Efcab12 (ENSMSIG00000000741) #18	Rpl32 (ENSMSIG00000000692) #19	Cand2 (ENSMSIG00000000651) #20	Tmem40 (ENSMSIG00000000359) #21	Raf1 (ENSMSIG00000000188) #22	ENSMSIG00000031938 #23	Mkrn2os (ENSMSIG00000031937) #24	Tsen2 (ENSMSIG00000031936) #25	Pparg (ENSMSIG00000031935) #26	Timp4 (ENSMSIG00000031934) #27	ENSMSIG00000031933 #28	Syn2 (ENSMSIG00000031932) #29	ENSMSIG00000031931 #30	ENSMSIG00000031930 #31	ENSMSIG00000031929 #32	Atg7 (ENSMSIG00000031927) #33
spretus	MODERN SPECIES	15	Alox5 (MGP_SPRETEiJ_G0029798)	Marchf8 (MGP_SPRETEiJ_G0029797) #7	MGP_SPRETEiJ_G0029796 ##8	Zfand4 (MGP_SPRETEiJ_G0029795) #8	Washc2 (MGP_SPRETEiJ_G0029794) #9	MGP_SPRETEiJ_G0029793 #11	Plxnd1 (MGP_SPRETEiJ_G0029792) #12	H1f8 (MGP_SPRETEiJ_G0029791) #13	Rho (MGP_SPRETEiJ_G0029790) #15	Ift122 (MGP_SPRETEiJ_G0029789) #16	Mbd4 (MGP_SPRETEiJ_G0029788) #17	Efcab12 (MGP_SPRETEiJ_G0029787) #18	MGP_SPRETEiJ_G0029786 ##19	Cand2 (MGP_SPRETEiJ_G0029785) #20	Tmem40 (MGP_SPRETEiJ_G0029784) #21	Raf1 (MGP_SPRETEiJ_G0029783) #22	Mkrn2 (MGP_SPRETEiJ_G0029782) #23	Mkrn2os (MGP_SPRETEiJ_G0029781) #24	Tsen2 (MGP_SPRETEiJ_G0029780) #25	Pparg (MGP_SPRETEiJ_G0029779) #26	Timp4 (MGP_SPRETEiJ_G0029778) #27	MGP_SPRETEiJ_G0029777	Syn2 (MGP_SPRETEiJ_G0029776) #29	Tamm41 (MGP_SPRETEiJ_G0029775) #30	Vgll4 (MGP_SPRETEiJ_G0029774) #31	Atg7 (MGP_SPRETEiJ_G0029773) #33	Hrh1 (MGP_SPRETEiJ_G0029772)	Slc6a1 (MGP_SPRETEiJ_G0029771)	Slc6a11 (MGP_SPRETEiJ_G0029770)	Atp2b2 (MGP_SPRETEiJ_G0029769)	Sec13 (MGP_SPRETEiJ_G0029768)
Mouse	MODERN SPECIES	15	Or13a1 (ENSMUSG00000053391)	Alox5 (ENSMUSG00000025701)	Marchf8 (ENSMUSG00000025702) #7	Zfand4 (ENSMUSG00000042213) #8	Washc2 (ENSMUSG00000024104) #9	Tmcc1 (ENSMUSG00000030126) #11	Plxnd1 (ENSMUSG00000030123) #12	H1f8 (ENSMUSG00000042279) #13	Rho (ENSMUSG00000030324) #15	Ift122 (ENSMUSG00000030323) #16	Mbd4 (ENSMUSG00000030322) #17	Efcab12 (ENSMUSG00000030321) #18	Rpl32 (ENSMUSG00000057841) ##19	Cand2 (ENSMUSG00000030319) #20	Tmem40 (ENSMUSG00000059900) #21	Raf1 (ENSMUSG00000000441) #22	Mkrn2 (ENSMUSG00000000439) #23	Mkrn2os (ENSMUSG00000068011) #24	Tsen2 (ENSMUSG00000042389) #25	Pparg (ENSMUSG00000000440) #26	Timp4 (ENSMUSG00000030317) #27	Syn2 (ENSMUSG00000009394) #29	Tamm41 (ENSMUSG00000030316) #30	Vgll4 (ENSMUSG00000030315) #31	Atg7 (ENSMUSG00000030314) #33	Hrh1 (ENSMUSG00000053004)	Slc6a1 (ENSMUSG00000030310)	Slc6a11 (ENSMUSG00000030307)	Atp2b2 (ENSMUSG00000030302)	Sec13 (ENSMUSG00000030298)	Ghrl (ENSMUSG00000064177)
Ryukyu mouse	MODERN SPECIES	15	Alox5 (MGP_CAROLIEiJ_G0028770)	Marchf8 (MGP_CAROLIEiJ_G0028769) #7	MGP_CAROLIEiJ_G0028768 ##8	Zfand4 (MGP_CAROLIEiJ_G0028767) #8	Washc2 (MGP_CAROLIEiJ_G0028766) #9	Tmcc1 (MGP_CAROLIEiJ_G0028765) #11	Plxnd1 (MGP_CAROLIEiJ_G0028764) #12	H1f8 (MGP_CAROLIEiJ_G0028763) #13	Rho (MGP_CAROLIEiJ_G0028762) #15	Ift122 (MGP_CAROLIEiJ_G0028761) #16	Mbd4 (MGP_CAROLIEiJ_G0028760) #17	Efcab12 (MGP_CAROLIEiJ_G0028759) #18	MGP_CAROLIEiJ_G0028758 ##19	Cand2 (MGP_CAROLIEiJ_G0028757) #20	MGP_CAROLIEiJ_G0028756 #21	Raf1 (MGP_CAROLIEiJ_G0028755) #22	Mkrn2 (MGP_CAROLIEiJ_G0028754) #23	Mkrn2os (MGP_CAROLIEiJ_G0028753) #24	Tsen2 (MGP_CAROLIEiJ_G0028752) #25	Pparg (MGP_CAROLIEiJ_G0028751) #26	Timp4 (MGP_CAROLIEiJ_G0028750) #27	MGP_CAROLIEiJ_G0028749	Syn2 (MGP_CAROLIEiJ_G0028748) #29	Tamm41 (MGP_CAROLIEiJ_G0028747) #30	Vgll4 (MGP_CAROLIEiJ_G0028746) #31	Atg7 (MGP_CAROLIEiJ_G0028745) #33	Hrh1 (MGP_CAROLIEiJ_G0028744)	Slc6a1 (MGP_CAROLIEiJ_G0028743)	Slc6a11 (MGP_CAROLIEiJ_G0028742)	Atp2b2 (MGP_CAROLIEiJ_G0028741)	Sec13 (MGP_CAROLIEiJ_G0028740)
Shrew mouse	MODERN SPECIES	11	Alox5 (MGP_PahariEiJ_G0022521)	Marchf8 (MGP_PahariEiJ_G0022520) #7	MGP_PahariEiJ_G0022519 #8	MGP_PahariEiJ_G0022518 #8	Washc2 (MGP_PahariEiJ_G0022517) #9	Tmcc1 (MGP_PahariEiJ_G0022516) #11	Plxnd1 (MGP_PahariEiJ_G0022515) #12	H1f8 (MGP_PahariEiJ_G0022514) #13	Rho (MGP_PahariEiJ_G0022513) #15	Ift122 (MGP_PahariEiJ_G0022512) #16	MGP_PahariEiJ_G0022511 #17	Efcab12 (MGP_PahariEiJ_G0022510) #18	MGP_PahariEiJ_G0022509 ##19	Cand2 (MGP_PahariEiJ_G0022508) #20	Tmem40 (MGP_PahariEiJ_G0022507) #21	Raf1 (MGP_PahariEiJ_G0022506) #22	Mkrn2 (MGP_PahariEiJ_G0022505) #23	Mkrn2os (MGP_PahariEiJ_G0022504) #24	Tsen2 (MGP_PahariEiJ_G0022503) #25	Pparg (MGP_PahariEiJ_G0022502) #26	Timp4 (MGP_PahariEiJ_G0022501) #27	MGP_PahariEiJ_G0022500	Syn2 (MGP_PahariEiJ_G0022499) #29	Tamm41 (MGP_PahariEiJ_G0022498) #30	Vgll4 (MGP_PahariEiJ_G0022497) #31	Atg7 (MGP_PahariEiJ_G0022496) #33	Hrh1 (MGP_PahariEiJ_G0022495)	Slc6a1 (MGP_PahariEiJ_G0022494)	Slc6a11 (MGP_PahariEiJ_G0022493)	Atp2b2 (MGP_PahariEiJ_G0022492)	Sec13 (MGP_PahariEiJ_G0022491)
Rat	MODERN SPECIES	14	ENSRNOG00000066609	Zfand4 (ENSRNOG00000011791) #8	Washc2c (ENSRNOG00000011653) #9	LOC680385 (ENSRNOG00000011606)	Tmcc1 (ENSRNOG00000011614) #11	AABR07061825.2 (ENSRNOG00000059964)	Plxnd1 (ENSRNOG00000025209) #12	H1f8 (ENSRNOG00000025251) #13	Rho (ENSRNOG00000011144) #15	Ift122 (ENSRNOG00000010952) #16	Mbd4 (ENSRNOG00000010919) #17	Efcab12 (ENSRNOG00000026176) #18	Rpl32 (ENSRNOG00000010746) ##19	Cand2 (ENSRNOG00000010473) #20	Tmem40 (ENSRNOG00000010430) #21	Raf1 (ENSRNOG00000010153) #22	Mkrn2 (ENSRNOG00000009176) #23	Mkrn2os (ENSRNOG00000070957) #24	Tsen2 (ENSRNOG00000060175) #25	Pparg (ENSRNOG00000008839) #26	Timp4 (ENSRNOG00000007955) #27	ENSRNOG00000069227	AC128901.1 (ENSRNOG00000028826)	ENSRNOG00000067395	Syn2 (ENSRNOG00000008157) #29	Tamm41 (ENSRNOG00000007874) #30	Vgll4 (ENSRNOG00000007822) #31	Atg7 (ENSRNOG00000007486) #33	ENSRNOG00000069624	LOC120102367 (ENSRNOG00000067090)	Hrh1 (ENSRNOG00000007420)
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00940000156111	ENSGT00940000158282 #7	ENSGT00940000155716 #8	ENSGT00940000153997.b.a.a #9	ENSGT00940000155189 #11	ENSGT01020000230394.e.b.a #12	ENSGT00940000160900 #13	ENSGT01030000234549.a.a.a.a.a.b.b #15	ENSGT00390000001016.b #16	ENSGT00530000063687.a #17	ENSGT00390000014874 #18	ENSGT00940000153973.d ##19	ENSGT00940000153973.c.a.a ##19	ENSGT00390000017740.a.b #20	ENSGT00390000017530 #21	ENSGT00940000156084 #22	ENSGT00950000183077.a.b #23	ENSGT00390000003839 #24	ENSGT00390000013266 #25	ENSGT00940000158273 #26	ENSGT00940000159798 #27	ENSGT00940000156062 #29	ENSGT00390000000616 #30	ENSGT00390000003282.B #31	ENSGT00390000017509 #33	ENSGT00940000160690	ENSGT00940000156027	ENSGT00940000157569	ENSGT00940000161461	ENSGT00940000153393.B	ENSGT00390000004064
Cricetinae	ANCESTRAL SPECIES	8	ENSGT01060000248581.D.a.b.a.b	ENSGT00940000156111	ENSGT00940000158282 #7	ENSGT00940000155716 #8	ENSGT00940000153997.b.a.a #9	ENSGT00940000155189 #11	ENSGT01020000230394.e.b.a #12	ENSGT00940000160900 #13	ENSGT01030000234549.a.a.a.a.a.b.b #15	ENSGT00390000001016.b #16	ENSGT00530000063687.a #17	ENSGT00390000014874 #18	ENSGT00940000153973.d ##19	ENSGT00390000017740.a.b #20	ENSGT00390000017530 #21	ENSGT00940000156084 #22	ENSGT00950000183077.a.b #23	ENSGT00390000003839 #24	ENSGT00390000013266 #25	ENSGT00940000158273 #26	ENSGT00940000156062 #29	ENSGT00940000159798 #27	ENSGT00390000000616 #30	ENSGT00390000003282.B #31	ENSGT00390000017509 #33	ENSGT00940000160690	ENSGT00940000156027	ENSGT00940000157569	ENSGT00940000161461	ENSGT00940000153393.B	ENSGT00390000004064
Golden Hamster	MODERN SPECIES	622	Zfp422 (ENSMAUG00000020581)	Alox5 (ENSMAUG00000018983)	ENSMAUG00000021879 #7	ENSMAUG00000008109 #8	Washc2 (ENSMAUG00000020725) #9	ENSMAUG00000021669 #11	Plxnd1 (ENSMAUG00000021112) #12	H1f8 (ENSMAUG00000011359) #13	Rho (ENSMAUG00000002081) #15	Ift122 (ENSMAUG00000005778) #16	ENSMAUG00000014245 #17	Efcab12 (ENSMAUG00000010638) #18	ENSMAUG00000020260	Cand2 (ENSMAUG00000005693) #20	Tmem40 (ENSMAUG00000015454) #21	Raf1 (ENSMAUG00000015447) #22	Mkrn2 (ENSMAUG00000014200) #23	Mkrn2os (ENSMAUG00000010492) #24	ENSMAUG00000013859 #25	ENSMAUG00000012323 #26	ENSMAUG00000020153 #29	Timp4 (ENSMAUG00000018049) #27	ENSMAUG00000013097	Tamm41 (ENSMAUG00000017519) #30	Vgll4 (ENSMAUG00000011159) #31	Atg7 (ENSMAUG00000003276) #33	Hrh1 (ENSMAUG00000009874)	Slc6a1 (ENSMAUG00000021551)	Slc6a11 (ENSMAUG00000008311)	Atp2b2 (ENSMAUG00000009448)	Sec13 (ENSMAUG00000012999)
Chinese hamster chok1gshd	MODERN SPECIES	144	ENSCGRG00001008362	Alox5 (ENSCGRG00001010128)	Marchf8 (ENSCGRG00001003616) #7	Zfand4 (ENSCGRG00001023303) #8	Washc2 (ENSCGRG00001019572) #9	Tmcc1 (ENSCGRG00001016263) #11	Plxnd1 (ENSCGRG00001007901) #12	H1f8 (ENSCGRG00001024504) #13	Rho (ENSCGRG00001018161) #15	Ift122 (ENSCGRG00001012761) #16	Mbd4 (ENSCGRG00001003507) #17	Efcab12 (ENSCGRG00001000767) #18	ENSCGRG00001000039 ##19	Cand2 (ENSCGRG00001024197) #20	Tmem40 (ENSCGRG00001022432) #21	Raf1 (ENSCGRG00001020096) #22	ENSCGRG00001019373 #23	Mkrn2os (ENSCGRG00001018483) #24	Tsen2 (ENSCGRG00001017681) #25	Pparg (ENSCGRG00001013849) #26	Timp4 (ENSCGRG00001010158) #27	Syn2 (ENSCGRG00001007902) #29	Tamm41 (ENSCGRG00001003506) #30	Vgll4 (ENSCGRG00001001705) #31	Atg7 (ENSCGRG00001017070) #33	Hrh1 (ENSCGRG00001015773)	Slc6a1 (ENSCGRG00001006244)	Slc6a11 (ENSCGRG00001000475)	Atp2b2 (ENSCGRG00001021784)	Sec13 (ENSCGRG00001019327)	Ghrl (ENSCGRG00001018358)
Cricetidae_B	ANCESTRAL SPECIES	14	ENSGT01060000248581.D.a.b.a.b	ENSGT00940000156111	ENSGT00940000158282 #7	ENSGT00940000155716 #8	ENSGT00940000153997.b.a.a #9	ENSGT00940000155189 #11	ENSGT01020000230394.e.b.a #12	ENSGT00940000160900 #13	ENSGT01030000234549.a.a.a.a.a.b.b #15	ENSGT00390000001016.b #16	ENSGT00530000063687.a #17	ENSGT00390000014874 #18	ENSGT00940000153973.c.a.a ##19	ENSGT00390000017740.a.b #20	ENSGT00390000017530 #21	ENSGT00940000156084 #22	ENSGT00950000183077.a.b #23	ENSGT00390000003839 #24	ENSGT00390000013266 #25	ENSGT00940000158273 #26	ENSGT00940000159798 #27	ENSGT00940000156062 #29	ENSGT00390000000616 #30	ENSGT00390000003282.B #31	ENSGT00390000017509 #33	ENSGT00940000160690	ENSGT00940000156027	ENSGT00940000157569	ENSGT00940000161461	ENSGT00940000153393.B	ENSGT00390000004064
Prairie vole	MODERN SPECIES	84	Alox5 (ENSMOCG00000006115)	ENSMOCG00000002394 #7	ENSMOCG00000018066 #8	Washc2 (ENSMOCG00000018011) #9	Tmcc1 (ENSMOCG00000009713) #11	Plxnd1 (ENSMOCG00000014026) #12	H1f8 (ENSMOCG00000005594) #13	Rho (ENSMOCG00000022070) #15	Ift122 (ENSMOCG00000014549) #16	ENSMOCG00000002466 #17	ENSMOCG00000019929 #17	Efcab12 (ENSMOCG00000020496) #18	ENSMOCG00000015206 ##19	Cand2 (ENSMOCG00000012580) #20	Tmem40 (ENSMOCG00000021932) #21	Raf1 (ENSMOCG00000012403) #22	Mkrn2 (ENSMOCG00000015472) #23	Mkrn2os (ENSMOCG00000010265) #24	Tsen2 (ENSMOCG00000020824) #25	Pparg (ENSMOCG00000017202) #26	ENSMOCG00000013854	Timp4 (ENSMOCG00000013297) #27	Syn2 (ENSMOCG00000000368) #29	Tamm41 (ENSMOCG00000020960) #30	Vgll4 (ENSMOCG00000012297) #31	Atg7 (ENSMOCG00000009400) #33	ENSMOCG00000016658	Hrh1 (ENSMOCG00000009133)	Slc6a1 (ENSMOCG00000011689)	Slc6a11 (ENSMOCG00000010284)	Atp2b2 (ENSMOCG00000022399)
Northern American deer mouse	MODERN SPECIES	16	Alox5 (ENSPEMG00000015300)	Marchf8 (ENSPEMG00000015311) #7	Zfand4 (ENSPEMG00000008943) #8	Washc2 (ENSPEMG00000017284) #9	Tmcc1 (ENSPEMG00000000449) #11	ENSPEMG00000024601	Plxnd1 (ENSPEMG00000008271) #12	H1f8 (ENSPEMG00000011381) #13	Rho (ENSPEMG00000008463) #15	Ift122 (ENSPEMG00000017389) #16	Mbd4 (ENSPEMG00000006226) #17	Efcab12 (ENSPEMG00000012553) #18	ENSPEMG00000012965 ##19	ENSPEMG00000029699 ##20	Tmem40 (ENSPEMG00000002944) #21	Raf1 (ENSPEMG00000012728) #22	Mkrn2 (ENSPEMG00000002776) #23	Mkrn2os (ENSPEMG00000012076) #24	Tsen2 (ENSPEMG00000013175) #25	Pparg (ENSPEMG00000013545) #26	Timp4 (ENSPEMG00000026166) #27	Syn2 (ENSPEMG00000016120) #29	Tamm41 (ENSPEMG00000017033) #30	Vgll4 (ENSPEMG00000026845) #31	Atg7 (ENSPEMG00000010473) #33	Hrh1 (ENSPEMG00000028414)	Slc6a1 (ENSPEMG00000011702)	Slc6a11 (ENSPEMG00000020194)	Atp2b2 (ENSPEMG00000000259)	Sec13 (ENSPEMG00000009433)	Ghrl (ENSPEMG00000001433)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1707	Fgd5 (ENSNGAG00000024178)	Nr2c2 (ENSNGAG00000022501)	Mrps25 (ENSNGAG00000021861)	Rbsn (ENSNGAG00000022967)	Trh (ENSNGAG00000022332)	Tmcc1 (ENSNGAG00000010573) #11	Plxnd1 (ENSNGAG00000020476) #12	H1f8 (ENSNGAG00000023630) #13	Rho (ENSNGAG00000020656) #15	Ift122 (ENSNGAG00000022462) #16	ENSNGAG00000017381 #17	Efcab12 (ENSNGAG00000008314) #18	ENSNGAG00000024001 ##19	Cand2 (ENSNGAG00000024002) #20	Tmem40 (ENSNGAG00000021850) #21	Raf1 (ENSNGAG00000019548) #22	Mkrn2 (ENSNGAG00000012579) #23	Mkrn2os (ENSNGAG00000019573) #24	ENSNGAG00000013561 #25	Pparg (ENSNGAG00000014683) #26	Timp4 (ENSNGAG00000021746) #27	Syn2 (ENSNGAG00000022266) #29	Tamm41 (ENSNGAG00000013592) #30	Vgll4 (ENSNGAG00000013946) #31	ENSNGAG00000003030	Hrh1 (ENSNGAG00000021456)	Slc6a1 (ENSNGAG00000015663)	Slc6a11 (ENSNGAG00000013842)	Atp2b2 (ENSNGAG00000015473)	Sec13 (ENSNGAG00000003425)	Ghrl (ENSNGAG00000022045)
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	45	Fgd5 (ENSJJAG00000001082)	Nr2c2 (ENSJJAG00000016580)	Mrps25 (ENSJJAG00000013413)	Rbsn (ENSJJAG00000024360)	ENSJJAG00000023012	Tmcc1 (ENSJJAG00000019999) #11	ENSJJAG00000020659	Plxnd1 (ENSJJAG00000014069) #12	ENSJJAG00000014828 #13	Rho (ENSJJAG00000022285) #15	Ift122 (ENSJJAG00000020288) #16	ENSJJAG00000016695 #17	ENSJJAG00000021233 ##19	Cand2 (ENSJJAG00000018247) #20	Tmem40 (ENSJJAG00000009444) #21	ENSJJAG00000016961 #22	Mkrn2 (ENSJJAG00000019765) #23	Mkrn2os (ENSJJAG00000022652) #24	ENSJJAG00000015646	ENSJJAG00000002861 #25	Pparg (ENSJJAG00000023734) #26	ENSJJAG00000012036	ENSJJAG00000015072 #29	Timp4 (ENSJJAG00000015654) #27	Tamm41 (ENSJJAG00000015841) #30	Vgll4 (ENSJJAG00000017532) #31	Atg7 (ENSJJAG00000021264) #33	Hrh1 (ENSJJAG00000012905)	Slc6a1 (ENSJJAG00000013717)	Slc6a11 (ENSJJAG00000008690)	Atp2b2 (ENSJJAG00000009628)
Lesser Egyptian jerboa	MODERN SPECIES	89	Gkn3 (ENSJJAG00000008849)	Bmp10 (ENSJJAG00000015538)	Arhgap25 (ENSJJAG00000019832)	Prokr1 (ENSJJAG00000012059)	Nid1 (ENSJJAG00000016000)	Gpr137b (ENSJJAG00000017509)	Edaradd (ENSJJAG00000019933)	ENSJJAG00000008800	ENSJJAG00000015235	ENSJJAG00000022730	ENSJJAG00000013416	Actn2 (ENSJJAG00000016245)	ENSJJAG00000012786	Mtr (ENSJJAG00000019411)	Ryr2 (ENSJJAG00000023141)	ENSJJAG00000012477 #22	ENSJJAG00000014102	Chrm3 (ENSJJAG00000001306)	ENSJJAG00000022159	Zmynd11 (ENSJJAG00000013493)	Dip2c (ENSJJAG00000022563)	ENSJJAG00000015934	Larp4b (ENSJJAG00000020847)	Gtpbp4 (ENSJJAG00000010021)	ENSJJAG00000010808	ENSJJAG00000023023	Wdr37 (ENSJJAG00000001407)	Adarb2 (ENSJJAG00000015849)	ENSJJAG00000023250	ENSJJAG00000023540	ENSJJAG00000005077
Kangaroo rat	MODERN SPECIES	331	Ccdc174 (ENSDORG00000007328)	4930590J08Rik (ENSDORG00000007329)	Fgd5 (ENSDORG00000016297)	Nr2c2 (ENSDORG00000007038)	Mrps25 (ENSDORG00000026838)	Rbsn (ENSDORG00000009815)	Tmcc1 (ENSDORG00000026595) #11	Plxnd1 (ENSDORG00000000912) #12	ENSDORG00000026967 #13	Rho (ENSDORG00000000911) #15	Ift122 (ENSDORG00000000906) #16	ENSDORG00000000902 #17	Rpl32 (ENSDORG00000008426) ##19	Cand2 (ENSDORG00000008424) #20	ENSDORG00000023579 #21	Raf1 (ENSDORG00000015622) #22	Mkrn2 (ENSDORG00000015621) #23	Mkrn2os (ENSDORG00000028573) #24	Tsen2 (ENSDORG00000003395) #25	Pparg (ENSDORG00000003445) #26	ENSDORG00000009507 #29	Timp4 (ENSDORG00000009509) #27	Tamm41 (ENSDORG00000002091) #30	Vgll4 (ENSDORG00000004378) #31	Atg7 (ENSDORG00000004380) #33	Slc6a1 (ENSDORG00000016380)	Slc6a11 (ENSDORG00000016390)	Atp2b2 (ENSDORG00000015330)	Sec13 (ENSDORG00000015327)	Ghrl (ENSDORG00000012281)	Tatdn2 (ENSDORG00000012279)