Gnathostomata ANCESTRAL SPECIES 33 ENSGT00940000160218 ENSGT00940000164549 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112 ENSGT00390000014109 ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000156027 #37 Euteleostomi ANCESTRAL SPECIES 9 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT01030000235208 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000154527.b ENSGT00550000074921 Sarcopterygii ANCESTRAL SPECIES 6 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT01030000235208 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000154527.b ENSGT00550000074921 Tetrapoda ANCESTRAL SPECIES 14 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT01030000235208 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00550000074921 ENSGT00620000089227 Amniota ANCESTRAL SPECIES 22 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT01030000235208 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 Mammalia ANCESTRAL SPECIES 18 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00390000014109 ENSGT00950000183041.A.e ENSGT00950000183041.A.f ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT01030000235208 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 Theria ANCESTRAL SPECIES 28 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973 #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT01030000235208 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B Eutheria ANCESTRAL SPECIES 14 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b ##20 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT01030000235208 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT00930000152979 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b ##20 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT01030000235208 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 ENSGT00940000153393.B Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Glires ANCESTRAL SPECIES 2 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Rodentia ANCESTRAL SPECIES 2 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Rodentia_A ANCESTRAL SPECIES 27 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Sciuridae ANCESTRAL SPECIES 41 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Marmotini ANCESTRAL SPECIES 49 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00960000190360 #36 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B Alpin marmot MODERN SPECIES 40 C3orf20 (ENSMMMG00000011543) #7 FGD5 (ENSMMMG00000011473) #8 NR2C2 (ENSMMMG00000011464) #9 MRPS25 (ENSMMMG00000011452) #10 RBSN (ENSMMMG00000011435) #11 TRH (ENSMMMG00000011424) #12 TMCC1 (ENSMMMG00000011365) #13 ENSMMMG00000011319 #14 ENSMMMG00000011299 #15 RHO (ENSMMMG00000011272) #16 IFT122 (ENSMMMG00000011068) #17 MBD4 (ENSMMMG00000011043) #18 EFCAB12 (ENSMMMG00000011023) #19 ENSMMMG00000010997 #20 ENSMMMG00000010993 #21 RAF1 (ENSMMMG00000010957) #22 ENSMMMG00000010950 #23 MKRN2 (ENSMMMG00000010927) #24 MKRN2OS (ENSMMMG00000010915) #25 ENSMMMG00000010907 #26 ENSMMMG00000010899 #27 PPARG (ENSMMMG00000010840) #28 ENSMMMG00000010687 #29 SYN2 (ENSMMMG00000010440) #30 TAMM41 (ENSMMMG00000010322) #31 VGLL4 (ENSMMMG00000010304) #32 ATG7 (ENSMMMG00000009966) #33 ENSMMMG00000009925 #34 HRH1 (ENSMMMG00000009921) #35 ENSMMMG00000009895 #36 SLC6A1 (ENSMMMG00000009856) #37 Marmotini_b ANCESTRAL SPECIES 62 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00960000190360 #36 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B Squirrel MODERN SPECIES 202 GRIP2 (ENSSTOG00000000954) CCDC174 (ENSSTOG00000027414) C3orf20 (ENSSTOG00000002907) #7 FGD5 (ENSSTOG00000005202) #8 NR2C2 (ENSSTOG00000005250) #9 MRPS25 (ENSSTOG00000030962) #10 RBSN (ENSSTOG00000022986) #11 TRH (ENSSTOG00000026247) #12 TMCC1 (ENSSTOG00000019869) #13 PLXND1 (ENSSTOG00000024621) #14 RHO (ENSSTOG00000028352) #16 IFT122 (ENSSTOG00000004353) #17 MBD4 (ENSSTOG00000020663) #18 ENSSTOG00000026505 #20 CAND2 (ENSSTOG00000023136) #21 RAF1 (ENSSTOG00000025146) #22 MKRN2 (ENSSTOG00000010520) #24 MKRN2OS (ENSSTOG00000031428) #25 TSEN2 (ENSSTOG00000000538) #26 PPARG (ENSSTOG00000012778) #28 SYN2 (ENSSTOG00000011519) #30 TIMP4 (ENSSTOG00000034531) #29 ENSSTOG00000028589 VGLL4 (ENSSTOG00000025247) #32 ATG7 (ENSSTOG00000015288) #33 HRH1 (ENSSTOG00000015286) #35 SLC6A1 (ENSSTOG00000007598) #37 SLC6A11 (ENSSTOG00000028999) ATP2B2 (ENSSTOG00000014026) SEC13 (ENSSTOG00000014017) GHRL (ENSSTOG00000022095) Arctic ground squirrel MODERN SPECIES 23 NR2C2 (ENSUPAG00010000576) #9 MRPS25 (ENSUPAG00010000567) #10 RBSN (ENSUPAG00010000555) #11 TRH (ENSUPAG00010000545) #12 TMCC1 (ENSUPAG00010000491) #13 PLXND1 (ENSUPAG00010000023) #14 H1-8 (ENSUPAG00010023069) #15 RHO (ENSUPAG00010023066) #16 IFT122 (ENSUPAG00010023058) #17 ENSUPAG00010023053 #18 ENSUPAG00010023052 #18 EFCAB12 (ENSUPAG00010023049) #19 ENSUPAG00010023046 #20 CAND2 (ENSUPAG00010023044) #21 TMEM40 (ENSUPAG00010023040) RAF1 (ENSUPAG00010023038) #22 MKRN2 (ENSUPAG00010023036) #24 MKRN2OS (ENSUPAG00010023035) #25 TSEN2 (ENSUPAG00010023034) #26 PPARG (ENSUPAG00010023031) #28 TIMP4 (ENSUPAG00010023029) #29 SYN2 (ENSUPAG00010023028) #30 ENSUPAG00010023027 #31 VGLL4 (ENSUPAG00010023024) #32 ATG7 (ENSUPAG00010023011) #33 HRH1 (ENSUPAG00010023010) #35 ENSUPAG00010023009 #36 SLC6A1 (ENSUPAG00010023006) #37 SLC6A11 (ENSUPAG00010023004) ATP2B2 (ENSUPAG00010022999) SEC13 (ENSUPAG00010022998) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 10 NR2C2 (ENSSVLG00005017625) #9 MRPS25 (ENSSVLG00005017966) #10 RBSN (ENSSVLG00005018031) #11 TRH (ENSSVLG00005018181) #12 ENSSVLG00005018231 TMCC1 (ENSSVLG00005018250) #13 PLXND1 (ENSSVLG00005018384) #14 ENSSVLG00005018771 #15 RHO (ENSSVLG00005018827) #16 IFT122 (ENSSVLG00005018941) #17 MBD4 (ENSSVLG00005019308) #18 EFCAB12 (ENSSVLG00005019404) #19 ENSSVLG00005019450 ##20 CAND2 (ENSSVLG00005019570) #21 TMEM40 (ENSSVLG00005019760) ENSSVLG00005019978 #22 MKRN2 (ENSSVLG00005020340) #24 MKRN2OS (ENSSVLG00005020454) #25 TSEN2 (ENSSVLG00005020543) #26 PPARG (ENSSVLG00005020780) #28 SYN2 (ENSSVLG00005021130) #30 TIMP4 (ENSSVLG00005021374) #29 TAMM41 (ENSSVLG00005021448) #31 ENSSVLG00005021494 VGLL4 (ENSSVLG00005021566) #32 ATG7 (ENSSVLG00005021683) #33 HRH1 (ENSSVLG00005021749) #35 SLC6A1 (ENSSVLG00005021844) #37 SLC6A11 (ENSSVLG00005022396) ATP2B2 (ENSSVLG00005022802) SEC13 (ENSSVLG00005023877) Eurasian red squirrel MODERN SPECIES 8 BCO1 (ENSSVLG00005025719) ENSSVLG00005025763 C16orf46 (ENSSVLG00005014992) ENSSVLG00005015037 CENPN (ENSSVLG00005015134) CMC2 (ENSSVLG00005015210) CDYL2 (ENSSVLG00005015278) DYNLRB2 (ENSSVLG00005015349) ENSSVLG00005015446 WWOX (ENSSVLG00005015526) ENSSVLG00005015573 CLEC3A (ENSSVLG00005015615) VAT1L (ENSSVLG00005015671) NUDT7 (ENSSVLG00005015783) ADAMTS18 (ENSSVLG00005015898) ENSSVLG00005016092 #22 SYCE1L (ENSSVLG00005016146) MON1B (ENSSVLG00005016284) CNTNAP4 (ENSSVLG00005016453) ENSSVLG00005017621 DUXB (ENSSVLG00005017671) TERF2IP (ENSSVLG00005017752) KARS1 (ENSSVLG00005017790) ADAT1 (ENSSVLG00005017872) GABARAPL2 (ENSSVLG00005017970) TMEM231 (ENSSVLG00005018059) ENSSVLG00005018139 TMEM170A (ENSSVLG00005018166) CFDP1 (ENSSVLG00005018315) BCAR1 (ENSSVLG00005018450) ENSSVLG00005018505 Hystricomorpha ANCESTRAL SPECIES 48 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00940000155189 #13 ENSGT00940000160900 #15 ENSGT00390000016951 #12 ENSGT01020000230394.e.b.a #14 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 Hystricomorpha_a ANCESTRAL SPECIES 6 ENSGT00940000155615 ENSGT00440000033958 ENSGT00940000153655.B #7 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00940000157312.h ENSGT00940000157200 ENSGT00390000005378 ENSGT00390000006066 ENSGT00940000158804 ENSGT00390000003219 ENSGT00940000158155 ENSGT00950000182956.b.b.a.b ENSGT00940000158225 ENSGT00940000161249 ENSGT00940000155867 ENSGT00440000033504.B ENSGT00940000156857 Guinea pig MODERN SPECIES 109 GRIP2 (ENSCPOG00000021047) CCDC174 (ENSCPOG00000039402) C3orf20 (ENSCPOG00000006783) #7 FGD5 (ENSCPOG00000013157) #8 NR2C2 (ENSCPOG00000001512) #9 MRPS25 (ENSCPOG00000020398) #10 RBSN (ENSCPOG00000003200) #11 TMCC1 (ENSCPOG00000009299) #13 PLXND1 (ENSCPOG00000004989) #14 RHO (ENSCPOG00000004984) #16 IFT122 (ENSCPOG00000004975) #17 ENSCPOG00000004970 #18 RPL32 (ENSCPOG00000019967) ##20 CAND2 (ENSCPOG00000023286) #21 TMEM40 (ENSCPOG00000025632) RAF1 (ENSCPOG00000001210) #22 MKRN2 (ENSCPOG00000001208) #24 MKRN2OS (ENSCPOG00000032819) #25 ENSCPOG00000009944 FKBP4 (ENSCPOG00000002453) ITFG2 (ENSCPOG00000021230) ENSCPOG00000005850 ENSCPOG00000031884 ARHGAP21 (ENSCPOG00000004505) ENKUR (ENSCPOG00000009590) ENSCPOG00000000291 GPR158 (ENSCPOG00000001565) ENSCPOG00000034310 ENSCPOG00000013721 ENSCPOG00000039199 GAD2 (ENSCPOG00000013724) Hystricomorpha_b ANCESTRAL SPECIES 2 ENSGT00940000155615 ENSGT00440000033958 ENSGT00940000153655.B #7 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00940000157312.h ENSGT00940000157200 ENSGT00390000005378 ENSGT00390000006066 ENSGT00940000158804 ENSGT00390000003219 ENSGT00940000158155 ENSGT00950000182956.b.b.a.b ENSGT00940000158225 ENSGT00940000161249 ENSGT00940000155867 ENSGT00440000033504.B ENSGT00940000156857 Degu MODERN SPECIES 274 ENSODEG00000002030 RBSN (ENSODEG00000001991) #11 MRPS25 (ENSODEG00000001966) #10 NR2C2 (ENSODEG00000001892) #9 ENSODEG00000001861 ENSODEG00000001849 ENSODEG00000001772 TMCC1 (ENSODEG00000001710) #13 PLXND1 (ENSODEG00000003347) #14 RHO (ENSODEG00000003304) #16 IFT122 (ENSODEG00000003013) #17 ENSODEG00000002902 #18 ENSODEG00000002891 ##20 CAND2 (ENSODEG00000002821) #21 TMEM40 (ENSODEG00000002755) RAF1 (ENSODEG00000002734) #22 MKRN2 (ENSODEG00000002702) #24 MKRN2OS (ENSODEG00000002688) #25 ENSODEG00000002676 SLC6A11 (ENSODEG00000002665) SLC6A1 (ENSODEG00000002644) #37 ATG7 (ENSODEG00000002299) #33 ENSODEG00000002124 #32 ENSODEG00000018794 TAMM41 (ENSODEG00000002076) #31 TIMP4 (ENSODEG00000002023) #29 ENSODEG00000001988 #30 PPARG (ENSODEG00000002659) #28 TSEN2 (ENSODEG00000002629) #26 ENSODEG00000002503 HMCES (ENSODEG00000002476) Long-tailed chinchilla MODERN SPECIES 136 GRIP2 (ENSCLAG00000013538) CCDC174 (ENSCLAG00000011014) C3orf20 (ENSCLAG00000013841) #7 FGD5 (ENSCLAG00000011953) #8 NR2C2 (ENSCLAG00000011082) #9 MRPS25 (ENSCLAG00000008381) #10 RBSN (ENSCLAG00000011613) #11 TMCC1 (ENSCLAG00000014727) #13 PLXND1 (ENSCLAG00000012627) #14 RHO (ENSCLAG00000006233) #16 IFT122 (ENSCLAG00000006170) #17 MBD4 (ENSCLAG00000008974) #18 ENSCLAG00000007426 #20 CAND2 (ENSCLAG00000007541) #21 TMEM40 (ENSCLAG00000009668) RAF1 (ENSCLAG00000010316) #22 MKRN2 (ENSCLAG00000008755) #24 MKRN2OS (ENSCLAG00000009109) #25 ENSCLAG00000011764 FKBP4 (ENSCLAG00000013510) ITFG2 (ENSCLAG00000016639) TEX52 (ENSCLAG00000013429) FOXM1 (ENSCLAG00000014183) RHNO1 (ENSCLAG00000017326) TULP3 (ENSCLAG00000017345) TEAD4 (ENSCLAG00000012070) ENSCLAG00000008194 ENSCLAG00000009091 FAM171A1 (ENSCLAG00000009809) NMT2 (ENSCLAG00000008204) RPP38 (ENSCLAG00000010194) Naked mole-rat female MODERN SPECIES 27 ENSHGLG00000000266 ENSHGLG00000000240 ENSHGLG00000040044 #13 ENSHGLG00000040416 #15 RHO (ENSHGLG00000006668) #16 IFT122 (ENSHGLG00000009113) #17 MBD4 (ENSHGLG00000009034) #18 ENSHGLG00000015777 #19 ENSHGLG00000040769 #20 ENSHGLG00000015580 #21 ENSHGLG00000015498 ENSHGLG00000033042 ENSHGLG00000039038 ENSHGLG00000032617 ENSHGLG00000037560 ENSHGLG00000018214 #22 ENSHGLG00000018194 #24 ENSHGLG00000017856 #25 ENSHGLG00000045316 ENSHGLG00000032284 ENSHGLG00000019586 ENSHGLG00000039046 ENSHGLG00000000920 GATA2 (ENSHGLG00000000985) DNAJB8 (ENSHGLG00000046802) ENSHGLG00000037886 ENSHGLG00000000094 ENSHGLG00000000122 ENSHGLG00000002369 #32 HRH1 (ENSHGLG00000044045) #35 ENSHGLG00000045274 #37 Rodentia_B ANCESTRAL SPECIES 26 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Kangaroo rat MODERN SPECIES 331 Ccdc174 (ENSDORG00000007328) 4930590J08Rik (ENSDORG00000007329) #7 Fgd5 (ENSDORG00000016297) #8 Nr2c2 (ENSDORG00000007038) #9 Mrps25 (ENSDORG00000026838) #10 Rbsn (ENSDORG00000009815) #11 Tmcc1 (ENSDORG00000026595) #13 Plxnd1 (ENSDORG00000000912) #14 ENSDORG00000026967 #15 Rho (ENSDORG00000000911) #16 Ift122 (ENSDORG00000000906) #17 ENSDORG00000000902 #18 Rpl32 (ENSDORG00000008426) ##20 Cand2 (ENSDORG00000008424) #21 ENSDORG00000023579 Raf1 (ENSDORG00000015622) #22 Mkrn2 (ENSDORG00000015621) #24 Mkrn2os (ENSDORG00000028573) #25 Tsen2 (ENSDORG00000003395) #26 Pparg (ENSDORG00000003445) #28 ENSDORG00000009507 #30 Timp4 (ENSDORG00000009509) #29 Tamm41 (ENSDORG00000002091) #31 Vgll4 (ENSDORG00000004378) #32 Atg7 (ENSDORG00000004380) #33 Slc6a1 (ENSDORG00000016380) #37 Slc6a11 (ENSDORG00000016390) Atp2b2 (ENSDORG00000015330) Sec13 (ENSDORG00000015327) Ghrl (ENSDORG00000012281) Tatdn2 (ENSDORG00000012279) Myomorpha ANCESTRAL SPECIES 36 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Muroidea ANCESTRAL SPECIES 37 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Muroidea_A ANCESTRAL SPECIES 4 ENSGT01060000248581.D.a.b.a.b ENSGT00940000156111 ENSGT00940000158282 ENSGT00940000155716 ENSGT00940000153997.b.a.a ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Cricetidae ANCESTRAL SPECIES 3 ENSGT00940000156111 ENSGT00940000158282 ENSGT00940000155716 ENSGT00940000153997.b.a.a ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.d ##20 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Cricetinae ANCESTRAL SPECIES 8 ENSGT01060000248581.D.a.b.a.b ENSGT00940000156111 ENSGT00940000158282 ENSGT00940000155716 ENSGT00940000153997.b.a.a ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Golden Hamster MODERN SPECIES 622 Zfp422 (ENSMAUG00000020581) Alox5 (ENSMAUG00000018983) ENSMAUG00000021879 ENSMAUG00000008109 Washc2 (ENSMAUG00000020725) ENSMAUG00000021669 #13 Plxnd1 (ENSMAUG00000021112) #14 H1f8 (ENSMAUG00000011359) #15 Rho (ENSMAUG00000002081) #16 Ift122 (ENSMAUG00000005778) #17 ENSMAUG00000014245 #18 Efcab12 (ENSMAUG00000010638) #19 ENSMAUG00000020260 Cand2 (ENSMAUG00000005693) #21 Tmem40 (ENSMAUG00000015454) Raf1 (ENSMAUG00000015447) #22 Mkrn2 (ENSMAUG00000014200) #24 Mkrn2os (ENSMAUG00000010492) #25 ENSMAUG00000013859 #26 ENSMAUG00000012323 #28 ENSMAUG00000020153 #30 Timp4 (ENSMAUG00000018049) #29 ENSMAUG00000013097 Tamm41 (ENSMAUG00000017519) #31 Vgll4 (ENSMAUG00000011159) #32 Atg7 (ENSMAUG00000003276) #33 Hrh1 (ENSMAUG00000009874) #35 Slc6a1 (ENSMAUG00000021551) #37 Slc6a11 (ENSMAUG00000008311) Atp2b2 (ENSMAUG00000009448) Sec13 (ENSMAUG00000012999) Chinese hamster chok1gshd MODERN SPECIES 144 ENSCGRG00001008362 Alox5 (ENSCGRG00001010128) Marchf8 (ENSCGRG00001003616) Zfand4 (ENSCGRG00001023303) Washc2 (ENSCGRG00001019572) Tmcc1 (ENSCGRG00001016263) #13 Plxnd1 (ENSCGRG00001007901) #14 H1f8 (ENSCGRG00001024504) #15 Rho (ENSCGRG00001018161) #16 Ift122 (ENSCGRG00001012761) #17 Mbd4 (ENSCGRG00001003507) #18 Efcab12 (ENSCGRG00001000767) #19 ENSCGRG00001000039 ##20 Cand2 (ENSCGRG00001024197) #21 Tmem40 (ENSCGRG00001022432) Raf1 (ENSCGRG00001020096) #22 ENSCGRG00001019373 #24 Mkrn2os (ENSCGRG00001018483) #25 Tsen2 (ENSCGRG00001017681) #26 Pparg (ENSCGRG00001013849) #28 Timp4 (ENSCGRG00001010158) #29 Syn2 (ENSCGRG00001007902) #30 Tamm41 (ENSCGRG00001003506) #31 Vgll4 (ENSCGRG00001001705) #32 Atg7 (ENSCGRG00001017070) #33 Hrh1 (ENSCGRG00001015773) #35 Slc6a1 (ENSCGRG00001006244) #37 Slc6a11 (ENSCGRG00001000475) Atp2b2 (ENSCGRG00001021784) Sec13 (ENSCGRG00001019327) Ghrl (ENSCGRG00001018358) Cricetidae_B ANCESTRAL SPECIES 14 ENSGT01060000248581.D.a.b.a.b ENSGT00940000156111 ENSGT00940000158282 ENSGT00940000155716 ENSGT00940000153997.b.a.a ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Prairie vole MODERN SPECIES 84 Alox5 (ENSMOCG00000006115) ENSMOCG00000002394 ENSMOCG00000018066 Washc2 (ENSMOCG00000018011) Tmcc1 (ENSMOCG00000009713) #13 Plxnd1 (ENSMOCG00000014026) #14 H1f8 (ENSMOCG00000005594) #15 Rho (ENSMOCG00000022070) #16 Ift122 (ENSMOCG00000014549) #17 ENSMOCG00000002466 #18 ENSMOCG00000019929 #18 Efcab12 (ENSMOCG00000020496) #19 ENSMOCG00000015206 #20 Cand2 (ENSMOCG00000012580) #21 Tmem40 (ENSMOCG00000021932) Raf1 (ENSMOCG00000012403) #22 Mkrn2 (ENSMOCG00000015472) #24 Mkrn2os (ENSMOCG00000010265) #25 Tsen2 (ENSMOCG00000020824) #26 Pparg (ENSMOCG00000017202) #28 ENSMOCG00000013854 Timp4 (ENSMOCG00000013297) #29 Syn2 (ENSMOCG00000000368) #30 Tamm41 (ENSMOCG00000020960) #31 Vgll4 (ENSMOCG00000012297) #32 Atg7 (ENSMOCG00000009400) #33 ENSMOCG00000016658 Hrh1 (ENSMOCG00000009133) #35 Slc6a1 (ENSMOCG00000011689) #37 Slc6a11 (ENSMOCG00000010284) Atp2b2 (ENSMOCG00000022399) Northern American deer mouse MODERN SPECIES 16 Alox5 (ENSPEMG00000015300) Marchf8 (ENSPEMG00000015311) Zfand4 (ENSPEMG00000008943) Washc2 (ENSPEMG00000017284) Tmcc1 (ENSPEMG00000000449) #13 ENSPEMG00000024601 Plxnd1 (ENSPEMG00000008271) #14 H1f8 (ENSPEMG00000011381) #15 Rho (ENSPEMG00000008463) #16 Ift122 (ENSPEMG00000017389) #17 Mbd4 (ENSPEMG00000006226) #18 Efcab12 (ENSPEMG00000012553) #19 ENSPEMG00000012965 ##20 ENSPEMG00000029699 ##21 Tmem40 (ENSPEMG00000002944) Raf1 (ENSPEMG00000012728) #22 Mkrn2 (ENSPEMG00000002776) #24 Mkrn2os (ENSPEMG00000012076) #25 Tsen2 (ENSPEMG00000013175) #26 Pparg (ENSPEMG00000013545) #28 Timp4 (ENSPEMG00000026166) #29 Syn2 (ENSPEMG00000016120) #30 Tamm41 (ENSPEMG00000017033) #31 Vgll4 (ENSPEMG00000026845) #32 Atg7 (ENSPEMG00000010473) #33 Hrh1 (ENSPEMG00000028414) #35 Slc6a1 (ENSPEMG00000011702) #37 Slc6a11 (ENSPEMG00000020194) Atp2b2 (ENSPEMG00000000259) Sec13 (ENSPEMG00000009433) Ghrl (ENSPEMG00000001433) Murinae ANCESTRAL SPECIES 4 ENSGT01060000248581.D.a.b.a.b ENSGT00940000156111 ENSGT00940000158282 ENSGT00940000155716 ENSGT00940000153997.b.a.a ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Mus ANCESTRAL SPECIES 12 ENSGT01060000248581.D.a.b.a.b ENSGT00940000156111 ENSGT00940000158282 ENSGT00940000155716 ENSGT00940000153997.b.a.a ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Mus_A ANCESTRAL SPECIES 7 ENSGT00940000156111 ENSGT00940000158282 ENSGT00940000155716.h ENSGT00940000155716.g ENSGT00940000153997.b.a.a ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Mus_B ANCESTRAL SPECIES 15 ENSGT00940000158282 ENSGT00940000155716.h ENSGT00940000155716.g ENSGT00940000153997.b.a.a ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b ##20 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Mouse MODERN SPECIES 15 Or13a1 (ENSMUSG00000053391) Alox5 (ENSMUSG00000025701) Marchf8 (ENSMUSG00000025702) Zfand4 (ENSMUSG00000042213) Washc2 (ENSMUSG00000024104) Tmcc1 (ENSMUSG00000030126) #13 Plxnd1 (ENSMUSG00000030123) #14 H1f8 (ENSMUSG00000042279) #15 Rho (ENSMUSG00000030324) #16 Ift122 (ENSMUSG00000030323) #17 Mbd4 (ENSMUSG00000030322) #18 Efcab12 (ENSMUSG00000030321) #19 Rpl32 (ENSMUSG00000057841) ##20 Cand2 (ENSMUSG00000030319) #21 Tmem40 (ENSMUSG00000059900) Raf1 (ENSMUSG00000000441) #22 Mkrn2 (ENSMUSG00000000439) #24 Mkrn2os (ENSMUSG00000068011) #25 Tsen2 (ENSMUSG00000042389) #26 Pparg (ENSMUSG00000000440) #28 Timp4 (ENSMUSG00000030317) #29 Syn2 (ENSMUSG00000009394) #30 Tamm41 (ENSMUSG00000030316) #31 Vgll4 (ENSMUSG00000030315) #32 Atg7 (ENSMUSG00000030314) #33 Hrh1 (ENSMUSG00000053004) #35 Slc6a1 (ENSMUSG00000030310) #37 Slc6a11 (ENSMUSG00000030307) Atp2b2 (ENSMUSG00000030302) Sec13 (ENSMUSG00000030298) Ghrl (ENSMUSG00000064177) Mus_C ANCESTRAL SPECIES 18 ENSGT00940000156111 ENSGT00940000158282 ENSGT00940000155716.h ENSGT00940000155716.g ENSGT00940000153997.b.a.a ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Steppe mouse MODERN SPECIES 3022 Marchf8 (ENSMSIG00000002032) Zfand4 (ENSMSIG00000001904) Washc2 (ENSMSIG00000001796) ENSMSIG00000001776 Tmcc1 (ENSMSIG00000001659) #13 ENSMSIG00000001422 #14 H1f8 (ENSMSIG00000001367) #15 ENSMSIG00000001359 Rho (ENSMSIG00000001309) #16 Ift122 (ENSMSIG00000000881) #17 Mbd4 (ENSMSIG00000000793) #18 Efcab12 (ENSMSIG00000000741) #19 Rpl32 (ENSMSIG00000000692) ##20 Cand2 (ENSMSIG00000000651) #21 Tmem40 (ENSMSIG00000000359) Raf1 (ENSMSIG00000000188) #22 ENSMSIG00000031938 #24 Mkrn2os (ENSMSIG00000031937) #25 Tsen2 (ENSMSIG00000031936) #26 Pparg (ENSMSIG00000031935) #28 Timp4 (ENSMSIG00000031934) #29 ENSMSIG00000031933 Syn2 (ENSMSIG00000031932) #30 ENSMSIG00000031931 #31 ENSMSIG00000031930 #32 ENSMSIG00000031929 Atg7 (ENSMSIG00000031927) #33 spretus MODERN SPECIES 15 Alox5 (MGP_SPRETEiJ_G0029798) Marchf8 (MGP_SPRETEiJ_G0029797) MGP_SPRETEiJ_G0029796 Zfand4 (MGP_SPRETEiJ_G0029795) Washc2 (MGP_SPRETEiJ_G0029794) MGP_SPRETEiJ_G0029793 #13 Plxnd1 (MGP_SPRETEiJ_G0029792) #14 H1f8 (MGP_SPRETEiJ_G0029791) #15 Rho (MGP_SPRETEiJ_G0029790) #16 Ift122 (MGP_SPRETEiJ_G0029789) #17 Mbd4 (MGP_SPRETEiJ_G0029788) #18 Efcab12 (MGP_SPRETEiJ_G0029787) #19 MGP_SPRETEiJ_G0029786 #20 Cand2 (MGP_SPRETEiJ_G0029785) #21 Tmem40 (MGP_SPRETEiJ_G0029784) Raf1 (MGP_SPRETEiJ_G0029783) #22 Mkrn2 (MGP_SPRETEiJ_G0029782) #24 Mkrn2os (MGP_SPRETEiJ_G0029781) #25 Tsen2 (MGP_SPRETEiJ_G0029780) #26 Pparg (MGP_SPRETEiJ_G0029779) #28 Timp4 (MGP_SPRETEiJ_G0029778) #29 MGP_SPRETEiJ_G0029777 Syn2 (MGP_SPRETEiJ_G0029776) #30 Tamm41 (MGP_SPRETEiJ_G0029775) #31 Vgll4 (MGP_SPRETEiJ_G0029774) #32 Atg7 (MGP_SPRETEiJ_G0029773) #33 Hrh1 (MGP_SPRETEiJ_G0029772) #35 Slc6a1 (MGP_SPRETEiJ_G0029771) #37 Slc6a11 (MGP_SPRETEiJ_G0029770) Atp2b2 (MGP_SPRETEiJ_G0029769) Sec13 (MGP_SPRETEiJ_G0029768) Ryukyu mouse MODERN SPECIES 15 Alox5 (MGP_CAROLIEiJ_G0028770) Marchf8 (MGP_CAROLIEiJ_G0028769) MGP_CAROLIEiJ_G0028768 Zfand4 (MGP_CAROLIEiJ_G0028767) Washc2 (MGP_CAROLIEiJ_G0028766) Tmcc1 (MGP_CAROLIEiJ_G0028765) #13 Plxnd1 (MGP_CAROLIEiJ_G0028764) #14 H1f8 (MGP_CAROLIEiJ_G0028763) #15 Rho (MGP_CAROLIEiJ_G0028762) #16 Ift122 (MGP_CAROLIEiJ_G0028761) #17 Mbd4 (MGP_CAROLIEiJ_G0028760) #18 Efcab12 (MGP_CAROLIEiJ_G0028759) #19 MGP_CAROLIEiJ_G0028758 #20 Cand2 (MGP_CAROLIEiJ_G0028757) #21 MGP_CAROLIEiJ_G0028756 Raf1 (MGP_CAROLIEiJ_G0028755) #22 Mkrn2 (MGP_CAROLIEiJ_G0028754) #24 Mkrn2os (MGP_CAROLIEiJ_G0028753) #25 Tsen2 (MGP_CAROLIEiJ_G0028752) #26 Pparg (MGP_CAROLIEiJ_G0028751) #28 Timp4 (MGP_CAROLIEiJ_G0028750) #29 MGP_CAROLIEiJ_G0028749 Syn2 (MGP_CAROLIEiJ_G0028748) #30 Tamm41 (MGP_CAROLIEiJ_G0028747) #31 Vgll4 (MGP_CAROLIEiJ_G0028746) #32 Atg7 (MGP_CAROLIEiJ_G0028745) #33 Hrh1 (MGP_CAROLIEiJ_G0028744) #35 Slc6a1 (MGP_CAROLIEiJ_G0028743) #37 Slc6a11 (MGP_CAROLIEiJ_G0028742) Atp2b2 (MGP_CAROLIEiJ_G0028741) Sec13 (MGP_CAROLIEiJ_G0028740) Shrew mouse MODERN SPECIES 11 Alox5 (MGP_PahariEiJ_G0022521) Marchf8 (MGP_PahariEiJ_G0022520) MGP_PahariEiJ_G0022519 MGP_PahariEiJ_G0022518 Washc2 (MGP_PahariEiJ_G0022517) Tmcc1 (MGP_PahariEiJ_G0022516) #13 Plxnd1 (MGP_PahariEiJ_G0022515) #14 H1f8 (MGP_PahariEiJ_G0022514) #15 Rho (MGP_PahariEiJ_G0022513) #16 Ift122 (MGP_PahariEiJ_G0022512) #17 MGP_PahariEiJ_G0022511 #18 Efcab12 (MGP_PahariEiJ_G0022510) #19 MGP_PahariEiJ_G0022509 #20 Cand2 (MGP_PahariEiJ_G0022508) #21 Tmem40 (MGP_PahariEiJ_G0022507) Raf1 (MGP_PahariEiJ_G0022506) #22 Mkrn2 (MGP_PahariEiJ_G0022505) #24 Mkrn2os (MGP_PahariEiJ_G0022504) #25 Tsen2 (MGP_PahariEiJ_G0022503) #26 Pparg (MGP_PahariEiJ_G0022502) #28 Timp4 (MGP_PahariEiJ_G0022501) #29 MGP_PahariEiJ_G0022500 Syn2 (MGP_PahariEiJ_G0022499) #30 Tamm41 (MGP_PahariEiJ_G0022498) #31 Vgll4 (MGP_PahariEiJ_G0022497) #32 Atg7 (MGP_PahariEiJ_G0022496) #33 Hrh1 (MGP_PahariEiJ_G0022495) #35 Slc6a1 (MGP_PahariEiJ_G0022494) #37 Slc6a11 (MGP_PahariEiJ_G0022493) Atp2b2 (MGP_PahariEiJ_G0022492) Sec13 (MGP_PahariEiJ_G0022491) Rat MODERN SPECIES 14 ENSRNOG00000066609 Zfand4 (ENSRNOG00000011791) Washc2c (ENSRNOG00000011653) LOC680385 (ENSRNOG00000011606) Tmcc1 (ENSRNOG00000011614) #13 AABR07061825.2 (ENSRNOG00000059964) Plxnd1 (ENSRNOG00000025209) #14 H1f8 (ENSRNOG00000025251) #15 Rho (ENSRNOG00000011144) #16 Ift122 (ENSRNOG00000010952) #17 Mbd4 (ENSRNOG00000010919) #18 Efcab12 (ENSRNOG00000026176) #19 Rpl32 (ENSRNOG00000010746) #20 Cand2 (ENSRNOG00000010473) #21 Tmem40 (ENSRNOG00000010430) Raf1 (ENSRNOG00000010153) #22 Mkrn2 (ENSRNOG00000009176) #24 Mkrn2os (ENSRNOG00000070957) #25 Tsen2 (ENSRNOG00000060175) #26 Pparg (ENSRNOG00000008839) #28 Timp4 (ENSRNOG00000007955) #29 ENSRNOG00000069227 AC128901.1 (ENSRNOG00000028826) ENSRNOG00000067395 Syn2 (ENSRNOG00000008157) #30 Tamm41 (ENSRNOG00000007874) #31 Vgll4 (ENSRNOG00000007822) #32 Atg7 (ENSRNOG00000007486) #33 ENSRNOG00000069624 LOC120102367 (ENSRNOG00000067090) Hrh1 (ENSRNOG00000007420) #35 Upper Galilee mountains blind mole rat MODERN SPECIES 1707 Fgd5 (ENSNGAG00000024178) #8 Nr2c2 (ENSNGAG00000022501) #9 Mrps25 (ENSNGAG00000021861) #10 Rbsn (ENSNGAG00000022967) #11 Trh (ENSNGAG00000022332) #12 Tmcc1 (ENSNGAG00000010573) #13 Plxnd1 (ENSNGAG00000020476) #14 H1f8 (ENSNGAG00000023630) #15 Rho (ENSNGAG00000020656) #16 Ift122 (ENSNGAG00000022462) #17 ENSNGAG00000017381 #18 Efcab12 (ENSNGAG00000008314) #19 ENSNGAG00000024001 ##20 Cand2 (ENSNGAG00000024002) #21 Tmem40 (ENSNGAG00000021850) Raf1 (ENSNGAG00000019548) #22 Mkrn2 (ENSNGAG00000012579) #24 Mkrn2os (ENSNGAG00000019573) #25 ENSNGAG00000013561 #26 Pparg (ENSNGAG00000014683) #28 Timp4 (ENSNGAG00000021746) #29 Syn2 (ENSNGAG00000022266) #30 Tamm41 (ENSNGAG00000013592) #31 Vgll4 (ENSNGAG00000013946) #32 ENSNGAG00000003030 Hrh1 (ENSNGAG00000021456) #35 Slc6a1 (ENSNGAG00000015663) #37 Slc6a11 (ENSNGAG00000013842) Atp2b2 (ENSNGAG00000015473) Sec13 (ENSNGAG00000003425) Ghrl (ENSNGAG00000022045) Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 45 Fgd5 (ENSJJAG00000001082) #8 Nr2c2 (ENSJJAG00000016580) #9 Mrps25 (ENSJJAG00000013413) #10 Rbsn (ENSJJAG00000024360) #11 ENSJJAG00000023012 #12 Tmcc1 (ENSJJAG00000019999) #13 ENSJJAG00000020659 Plxnd1 (ENSJJAG00000014069) #14 ENSJJAG00000014828 #15 Rho (ENSJJAG00000022285) #16 Ift122 (ENSJJAG00000020288) #17 ENSJJAG00000016695 #18 ENSJJAG00000021233 #20 Cand2 (ENSJJAG00000018247) #21 Tmem40 (ENSJJAG00000009444) ENSJJAG00000016961 #22 Mkrn2 (ENSJJAG00000019765) #24 Mkrn2os (ENSJJAG00000022652) #25 ENSJJAG00000015646 ENSJJAG00000002861 #26 Pparg (ENSJJAG00000023734) #28 ENSJJAG00000012036 ENSJJAG00000015072 #30 Timp4 (ENSJJAG00000015654) #29 Tamm41 (ENSJJAG00000015841) #31 Vgll4 (ENSJJAG00000017532) #32 Atg7 (ENSJJAG00000021264) #33 Hrh1 (ENSJJAG00000012905) #35 Slc6a1 (ENSJJAG00000013717) #37 Slc6a11 (ENSJJAG00000008690) Atp2b2 (ENSJJAG00000009628) Lesser Egyptian jerboa MODERN SPECIES 89 Gkn3 (ENSJJAG00000008849) Bmp10 (ENSJJAG00000015538) Arhgap25 (ENSJJAG00000019832) Prokr1 (ENSJJAG00000012059) Nid1 (ENSJJAG00000016000) Gpr137b (ENSJJAG00000017509) Edaradd (ENSJJAG00000019933) ENSJJAG00000008800 ENSJJAG00000015235 ENSJJAG00000022730 ENSJJAG00000013416 Actn2 (ENSJJAG00000016245) ENSJJAG00000012786 Mtr (ENSJJAG00000019411) Ryr2 (ENSJJAG00000023141) ENSJJAG00000012477 #22 ENSJJAG00000014102 Chrm3 (ENSJJAG00000001306) ENSJJAG00000022159 Zmynd11 (ENSJJAG00000013493) Dip2c (ENSJJAG00000022563) ENSJJAG00000015934 Larp4b (ENSJJAG00000020847) Gtpbp4 (ENSJJAG00000010021) ENSJJAG00000010808 ENSJJAG00000023023 Wdr37 (ENSJJAG00000001407) Adarb2 (ENSJJAG00000015849) ENSJJAG00000023250 ENSJJAG00000023540 ENSJJAG00000005077 Lagomorpha ANCESTRAL SPECIES 105 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000156027 #37 ENSGT00940000157569 Pika MODERN SPECIES 1896 ENSOPRG00000003562 #21 RAF1 (ENSOPRG00000003522) #22 MKRN2 (ENSOPRG00000003501) #24 TSEN2 (ENSOPRG00000003456) #26 PPARG (ENSOPRG00000003439) #28 TIMP4 (ENSOPRG00000003424) #29 SYN2 (ENSOPRG00000003375) #30 TAMM41 (ENSOPRG00000003357) #31 Rabbit MODERN SPECIES 20 FGD5 (ENSOCUG00000006961) #8 NR2C2 (ENSOCUG00000006975) #9 MRPS25 (ENSOCUG00000006984) #10 RBSN (ENSOCUG00000006988) #11 TRH (ENSOCUG00000006337) #12 TMCC1 (ENSOCUG00000013071) #13 PLXND1 (ENSOCUG00000013049) #14 ENSOCUG00000029379 RHO (ENSOCUG00000013036) #16 IFT122 (ENSOCUG00000013015) #17 MBD4 (ENSOCUG00000013006) #18 ENSOCUG00000012999 #19 ENSOCUG00000023407 ##20 CAND2 (ENSOCUG00000009266) #21 ENSOCUG00000031173 RAF1 (ENSOCUG00000014175) #22 MKRN2 (ENSOCUG00000014171) #24 MKRN2OS (ENSOCUG00000033126) #25 TSEN2 (ENSOCUG00000013203) #26 PPARG (ENSOCUG00000013194) #28 ENSOCUG00000015932 #30 TIMP4 (ENSOCUG00000015952) #29 VGLL4 (ENSOCUG00000001911) #32 ATG7 (ENSOCUG00000001908) #33 ENSOCUG00000025657 #37 SLC6A11 (ENSOCUG00000001627) LZTFL1 (ENSOCUG00000010140) SLC6A20 (ENSOCUG00000004216) SACM1L (ENSOCUG00000026080) LIMD1 (ENSOCUG00000001984) ENSOCUG00000024922 Tree shrew MODERN SPECIES 2688 RAF1 (ENSTBEG00000012253) #22 ENSTBEG00000012118 #24 TSEN2 (ENSTBEG00000011740) #26 Primates ANCESTRAL SPECIES 1 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT00930000152979 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b ##20 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 ENSGT00940000153393.B Haplorrhini ANCESTRAL SPECIES 5 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 ENSGT00940000153393.B Simiiformes ANCESTRAL SPECIES 1 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.b.b ##20 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 ENSGT00940000153393.B.v Catarrhini ANCESTRAL SPECIES 2 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.q.a ENSGT00940000158523 ENSGT00910000147988 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.b.b ##20 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000016970.h ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 Cercopithecidae DUPLICATION Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.q.a.a ENSGT00940000158523 ENSGT00910000147988 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084.bb #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000016970.h ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00390000013132.q.b ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.q.a.a ENSGT00940000158523 ENSGT00910000147988 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.b.b ##20 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084.bb #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00390000013132.q.b ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.q.a.a ENSGT00940000158523 ENSGT00910000147988 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.b.b ##20 ENSGT00940000153973.c.a.a.e.b #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084.bb #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000009405.b.c.b.b ENSGT00390000016970.h ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00390000013132.q.b ENSGT00940000156027 #37 ENSGT00940000157569 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.q.a.a ENSGT00940000158523 ENSGT00910000147988 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.b.b ##20 ENSGT00940000153973.c.a.a.d #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084.bb #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT01100000263509.a.a.b.b.a.b.b.b.a.a.a.a.b.b ENSGT00390000009405.b.c.b.b ENSGT00390000016970.h ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00390000013132.q.b ENSGT00940000156027 #37 Cercopithecinae_d ANCESTRAL SPECIES 12 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.q.a.a ENSGT00940000158523 ENSGT00910000147988 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.b.b ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084.bb #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000009405.b.c.b.b ENSGT00390000016970.h ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00390000013132.q.b ENSGT00940000156027 #37 ENSGT00940000157569 Sooty mangabey MODERN SPECIES 650 SLC6A6 (ENSCATG00000027535) ENSCATG00000039421 XPC (ENSCATG00000036725) TMEM43 (ENSCATG00000038308) WNT7A (ENSCATG00000033711) ENSCATG00000033105 FBLN2 (ENSCATG00000038061) HDAC11 (ENSCATG00000026123) NUP210 (ENSCATG00000035260) IQSEC1 (ENSCATG00000037864) RPL32 (ENSCATG00000038198) ##20 CAND2 (ENSCATG00000038720) #21 TMEM40 (ENSCATG00000027847) ENSCATG00000031525 ENSCATG00000001547 ENSCATG00000035852 #22 MKRN2 (ENSCATG00000041591) #24 MKRN2OS (ENSCATG00000040481) #25 TSEN2 (ENSCATG00000031911) #26 PPARG (ENSCATG00000022947) #28 ENSCATG00000017268 TIMP4 (ENSCATG00000034145) #29 SYN2 (ENSCATG00000031791) #30 ENSCATG00000042881 ENSCATG00000031162 TAMM41 (ENSCATG00000033399) #31 VGLL4 (ENSCATG00000041543) #32 ATG7 (ENSCATG00000034745) #33 HRH1 (ENSCATG00000000316) #35 ENSCATG00000031939 SLC6A1 (ENSCATG00000019250) #37 Drill MODERN SPECIES 874 GRIP2 (ENSMLEG00000029206) SLC6A6 (ENSMLEG00000040687) LSM3 (ENSMLEG00000036162) XPC (ENSMLEG00000041682) TMEM43 (ENSMLEG00000035818) ENSMLEG00000031201 WNT7A (ENSMLEG00000042427) FBLN2 (ENSMLEG00000040866) HDAC11 (ENSMLEG00000038310) NUP210 (ENSMLEG00000038717) IQSEC1 (ENSMLEG00000035708) RPL32 (ENSMLEG00000033655) ##20 CAND2 (ENSMLEG00000034596) #21 TMEM40 (ENSMLEG00000039986) ENSMLEG00000039626 RAF1 (ENSMLEG00000029839) #22 MKRN2 (ENSMLEG00000006880) #24 MKRN2OS (ENSMLEG00000006675) #25 TSEN2 (ENSMLEG00000038210) #26 PPARG (ENSMLEG00000043422) #28 TIMP4 (ENSMLEG00000040251) #29 SYN2 (ENSMLEG00000030880) #30 Olive baboon MODERN SPECIES 11 GRIP2 (ENSPANG00000010990) SLC6A6 (ENSPANG00000009556) LSM3 (ENSPANG00000009378) XPC (ENSPANG00000004175) TMEM43 (ENSPANG00000012906) CHCHD4 (ENSPANG00000025946) WNT7A (ENSPANG00000046909) ENSPANG00000007694 ENSPANG00000047403 HDAC11 (ENSPANG00000024163) NUP210 (ENSPANG00000006878) IQSEC1 (ENSPANG00000006877) ENSPANG00000007693 #20 CAND2 (ENSPANG00000018464) #21 TMEM40 (ENSPANG00000014208) RAF1 (ENSPANG00000008568) #22 ENSPANG00000035680 MKRN2 (ENSPANG00000021307) #24 TSEN2 (ENSPANG00000013415) #26 MKRN2OS (ENSPANG00000008481) #25 PPARG (ENSPANG00000016461) #28 SYN2 (ENSPANG00000024762) #30 TIMP4 (ENSPANG00000001070) #29 ENSPANG00000045955 ENSPANG00000031360 TAMM41 (ENSPANG00000025444) #31 VGLL4 (ENSPANG00000024761) #32 ATG7 (ENSPANG00000019142) #33 HRH1 (ENSPANG00000031157) #35 SLC6A1 (ENSPANG00000009643) #37 SLC6A11 (ENSPANG00000009913) Macaca ANCESTRAL SPECIES 5 ENSGT00910000146921 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.q.a.a ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.b.a.a ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084.bb #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000009405.b.c.b.b ENSGT00390000016970.h ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00390000013132.q.b ENSGT00940000156027 #37 ENSGT00940000157569 Pig-tailed macaque MODERN SPECIES 546 GRIP2 (ENSMNEG00000044173) SLC6A6 (ENSMNEG00000040859) ENSMNEG00000043632 XPC (ENSMNEG00000038400) TMEM43 (ENSMNEG00000032802) ENSMNEG00000040402 WNT7A (ENSMNEG00000037464) FBLN2 (ENSMNEG00000035537) HDAC11 (ENSMNEG00000040546) NUP210 (ENSMNEG00000041495) ENSMNEG00000029455 IQSEC1 (ENSMNEG00000042270) RPL32 (ENSMNEG00000030893) ##20 CAND2 (ENSMNEG00000044168) #21 TMEM40 (ENSMNEG00000027829) RAF1 (ENSMNEG00000040519) #22 MKRN2 (ENSMNEG00000031197) #24 MKRN2OS (ENSMNEG00000034066) #25 TSEN2 (ENSMNEG00000025898) #26 PPARG (ENSMNEG00000028217) #28 TIMP4 (ENSMNEG00000028992) #29 SYN2 (ENSMNEG00000033226) #30 ENSMNEG00000024024 ENSMNEG00000042157 TAMM41 (ENSMNEG00000040547) #31 VGLL4 (ENSMNEG00000039421) #32 ATG7 (ENSMNEG00000028392) #33 HRH1 (ENSMNEG00000008240) #35 ENSMNEG00000030516 SLC6A1 (ENSMNEG00000031841) #37 SLC6A11 (ENSMNEG00000031997) Macaca_a ANCESTRAL SPECIES 5 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.r ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.a.a.b.a.a.a.a.b ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.a.e.b #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084.bb #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT01100000263493.a.b.a.b.a.a.b.a.b.b.b.a.b.b.a.a.b.a.a ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B.v Rhesus MODERN SPECIES 11 CCDC174 (ENSMMUG00000044822) ENSMMUG00000062011 GRIP2 (ENSMMUG00000006342) SLC6A6 (ENSMMUG00000006340) TMEM43 (ENSMMUG00000023124) XPC (ENSMMUG00000023125) WNT7A (ENSMMUG00000018445) FBLN2 (ENSMMUG00000017659) HDAC11 (ENSMMUG00000001369) ENSMMUG00000056487 NUP210 (ENSMMUG00000015979) IQSEC1 (ENSMMUG00000001342) RPL32 (ENSMMUG00000001340) ##20 CAND2 (ENSMMUG00000001339) #21 TMEM40 (ENSMMUG00000010276) RAF1 (ENSMMUG00000007450) #22 MKRN2 (ENSMMUG00000009536) #24 MKRN2OS (ENSMMUG00000031993) #25 TSEN2 (ENSMMUG00000007195) #26 PPARG (ENSMMUG00000007191) #28 TIMP4 (ENSMMUG00000001127) #29 SYN2 (ENSMMUG00000001120) #30 ENSMMUG00000055179 TAMM41 (ENSMMUG00000013372) #31 ENSMMUG00000062782 VGLL4 (ENSMMUG00000021806) #32 ATG7 (ENSMMUG00000021804) #33 HRH1 (ENSMMUG00000056308) #35 SLC6A1 (ENSMMUG00000005917) #37 SLC6A11 (ENSMMUG00000005916) ATP2B2 (ENSMMUG00000019938) Crab-eating macaque MODERN SPECIES 11 GRIP2 (ENSMFAG00000035973) SLC6A6 (ENSMFAG00000038570) LSM3 (ENSMFAG00000063615) XPC (ENSMFAG00000031847) TMEM43 (ENSMFAG00000047872) ENSMFAG00000044351 WNT7A (ENSMFAG00000044809) FBLN2 (ENSMFAG00000003835) HDAC11 (ENSMFAG00000036363) ENSMFAG00000058794 NUP210 (ENSMFAG00000044461) IQSEC1 (ENSMFAG00000043873) ENSMFAG00000045190 #20 CAND2 (ENSMFAG00000044298) #21 TMEM40 (ENSMFAG00000039365) RAF1 (ENSMFAG00000038061) #22 ENSMFAG00000051059 MKRN2 (ENSMFAG00000035845) #24 MKRN2OS (ENSMFAG00000031892) #25 TSEN2 (ENSMFAG00000038583) #26 PPARG (ENSMFAG00000034317) #28 TIMP4 (ENSMFAG00000052548) #29 ENSMFAG00000021078 SYN2 (ENSMFAG00000041997) #30 ENSMFAG00000059255 TAMM41 (ENSMFAG00000033931) #31 VGLL4 (ENSMFAG00000009745) #32 ATG7 (ENSMFAG00000040779) #33 HRH1 (ENSMFAG00000030336) #35 SLC6A1 (ENSMFAG00000007438) #37 SLC6A11 (ENSMFAG00000034176) Vervet Monkey MODERN SPECIES 14 C3orf20 (ENSCSAG00000009277) #7 CCDC174 (ENSCSAG00000009294) GRIP2 (ENSCSAG00000009353) SLC6A6 (ENSCSAG00000009391) XPC (ENSCSAG00000009411) TMEM43 (ENSCSAG00000009426) CHCHD4 (ENSCSAG00000009431) WNT7A (ENSCSAG00000009439) FBLN2 (ENSCSAG00000009449) HDAC11 (ENSCSAG00000009462) NUP210 (ENSCSAG00000009474) IQSEC1 (ENSCSAG00000009482) RPL32 (ENSCSAG00000009485) ##20 CAND2 (ENSCSAG00000009557) #21 TMEM40 (ENSCSAG00000009604) RAF1 (ENSCSAG00000009721) #22 MKRN2 (ENSCSAG00000009754) #24 MKRN2OS (ENSCSAG00000009764) #25 TSEN2 (ENSCSAG00000009822) #26 PPARG (ENSCSAG00000009839) #28 TIMP4 (ENSCSAG00000009845) #29 SYN2 (ENSCSAG00000009855) #30 TAMM41 (ENSCSAG00000009866) #31 VGLL4 (ENSCSAG00000009873) #32 ATG7 (ENSCSAG00000009887) #33 HRH1 (ENSCSAG00000018810) #35 SLC6A1 (ENSCSAG00000009912) #37 SLC6A11 (ENSCSAG00000009991) ENSCSAG00000010009 ATP2B2 (ENSCSAG00000010018) SEC13 (ENSCSAG00000010026) Rhinopithecus ANCESTRAL SPECIES 113 ENSGT00940000156084.bb #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273.r #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000016970.h ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00910000148924 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00390000013132.q.b ENSGT00910000148795 ENSGT00940000156027 #37 Black snub-nosed monkey MODERN SPECIES 1833 ENSRBIG00000027349 ENSRBIG00000029284 #22 MKRN2 (ENSRBIG00000039128) #24 MKRN2OS (ENSRBIG00000033018) #25 TSEN2 (ENSRBIG00000033133) #26 PPARG (ENSRBIG00000042269) #28 Golden snub-nosed monkey MODERN SPECIES 2016 ENSRROG00000041930 #22 MKRN2 (ENSRROG00000033767) #24 MKRN2OS (ENSRROG00000037999) #25 TSEN2 (ENSRROG00000041156) #26 ENSRROG00000034587 PPARG (ENSRROG00000044807) #28 TIMP4 (ENSRROG00000043357) #29 SYN2 (ENSRROG00000040768) #30 ENSRROG00000042628 TAMM41 (ENSRROG00000034628) #31 VGLL4 (ENSRROG00000032842) #32 ENSRROG00000038335 ATG7 (ENSRROG00000041008) #33 HRH1 (ENSRROG00000012382) #35 ENSRROG00000044510 SLC6A1 (ENSRROG00000040161) #37 Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00940000159865 ENSGT00950000182988.a.a ENSGT00390000017679 ENSGT00390000016356 ENSGT00940000157975 ENSGT01030000234629.D ENSGT00390000011073 ENSGT00390000010564 ENSGT00940000153680.a ENSGT00390000018687 ENSGT01030000234590.A.a.a ENSGT00940000160019 ENSGT00940000157384 ENSGT00940000160780 ENSGT00940000161784 ENSGT00940000156084.cb #22 ENSGT01030000234598.a.a.a ENSGT00940000160853 ENSGT00730000110943.C ENSGT00730000111453 ENSGT00940000160658 ENSGT00390000012807 ENSGT00940000158330 ENSGT00390000016972.a.b.a.b.a ENSGT00940000166255 ENSGT00730000111263 ENSGT00390000016972.a.a.a ENSGT00390000008796 Rhinopithecus ANCESTRAL SPECIES 150 ENSGT00940000159865 ENSGT00950000182988.a.a ENSGT00390000017679 ENSGT00390000016356.h ENSGT00940000157975 ENSGT01030000234629.D ENSGT00390000011073 ENSGT00390000010564 ENSGT00940000153680.a ENSGT00390000018687 ENSGT01030000234590.A.a.a ENSGT00940000160019 ENSGT00940000157384 ENSGT00940000160780 ENSGT00940000161784 ENSGT00940000156084.cb #22 ENSGT01030000234598.a.a.a ENSGT00940000160853 ENSGT00730000110943.C ENSGT00730000111453 ENSGT00940000160658 ENSGT00390000012807 ENSGT00940000158330 ENSGT00730000111263 ENSGT00390000016972.a.a.a ENSGT00390000008796 Golden snub-nosed monkey MODERN SPECIES 2255 PIGX (ENSRROG00000036720) CEP19 (ENSRROG00000029243) NRROS (ENSRROG00000001687) ENSRROG00000024361 FBXO45 (ENSRROG00000033207) WDR53 (ENSRROG00000037786) SMCO1 (ENSRROG00000030631) RNF168 (ENSRROG00000043861) UBXN7 (ENSRROG00000042179) ENSRROG00000035740 DYNLT2B (ENSRROG00000036540) PCYT1A (ENSRROG00000032721) ENSRROG00000042812 SLC51A (ENSRROG00000031924) ZDHHC19 (ENSRROG00000027961) ENSRROG00000034209 #22 TFRC (ENSRROG00000028609) TNK2 (ENSRROG00000036469) ENSRROG00000044352 MUC20 (ENSRROG00000025108) RUBCN (ENSRROG00000008068) FYTTD1 (ENSRROG00000014194) LRCH3 (ENSRROG00000045445) IQCG (ENSRROG00000001712) RPL35A (ENSRROG00000008769) LMLN (ENSRROG00000028339) Black snub-nosed monkey MODERN SPECIES 182 ENSRBIG00000037526 #22 TFRC (ENSRBIG00000042357) TNK2 (ENSRBIG00000043455) Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00940000159865 ENSGT00950000182988.a.a ENSGT00390000017679 ENSGT00390000016356 ENSGT00940000157975 ENSGT01030000234629.D ENSGT00390000011073 ENSGT00390000010564 ENSGT00940000153680.a ENSGT00390000018687 ENSGT01030000234590.A.a.a ENSGT00940000160019 ENSGT00940000157384 ENSGT00940000160780 ENSGT00940000161784 ENSGT00940000156084.cb #22 ENSGT01030000234598.a.a.a ENSGT00940000160853 ENSGT00730000110943.C ENSGT00730000111453 ENSGT00940000160658 ENSGT00390000012807 ENSGT00940000158330 ENSGT00390000016972.a.b.a.b.a ENSGT00940000166255 ENSGT00730000111263 ENSGT00390000016972.a.a.a ENSGT00390000008796 Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00940000159865 ENSGT00950000182988.a.a ENSGT00390000017679 ENSGT00390000016356 ENSGT00940000157975 ENSGT01030000234629.D ENSGT00390000011073 ENSGT00390000010564 ENSGT00940000153680.a ENSGT00390000018687 ENSGT01030000234590.A.a.a ENSGT00940000160019 ENSGT00940000157384 ENSGT00940000160780 ENSGT00940000161784 ENSGT00940000156084.cb #22 ENSGT01030000234598.a.a.a ENSGT00940000160853 ENSGT00730000110943.C ENSGT00730000111453 ENSGT00940000160658 ENSGT00390000012807 ENSGT00940000158330 ENSGT00390000016972.a.b.a.b.a ENSGT00940000166255 ENSGT00730000111263 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00390000016972.a.b.a.b.b Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000159865 ENSGT00950000182988.a.a ENSGT00390000017679 ENSGT00390000016356 ENSGT00940000157975 ENSGT01030000234629.D ENSGT00390000011073 ENSGT00390000010564 ENSGT00940000153680.a ENSGT00390000018687 ENSGT01030000234590.A.a.a ENSGT00940000160019 ENSGT00940000157384 ENSGT00940000160780 ENSGT00940000161784 ENSGT00940000156084.cb #22 ENSGT01030000234598.a.a.a ENSGT00940000160853 ENSGT00730000110943.C ENSGT00730000111453 ENSGT00940000160658 ENSGT00390000012807 ENSGT00940000158330 ENSGT00730000111263 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00390000016972.a.b.a.b.b Cercopithecinae_d ANCESTRAL SPECIES 16 ENSGT00940000159865 ENSGT00950000182988.a.a ENSGT00390000017679 ENSGT00390000016356 ENSGT00940000157975 ENSGT01030000234629.D ENSGT00390000011073 ENSGT00390000010564 ENSGT00940000153680.a ENSGT00390000018687 ENSGT01030000234590.A.a.a ENSGT00940000160019 ENSGT00940000157384 ENSGT00940000160780 ENSGT00940000161784 ENSGT00940000156084.cb #22 ENSGT01030000234598.a.a.a ENSGT00940000160853 ENSGT00730000110943.C ENSGT00730000111453 ENSGT00940000160658 ENSGT00390000012807 ENSGT00940000158330 ENSGT00730000111263 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00390000016972.a.b.a.b.b Sooty mangabey MODERN SPECIES 458 SENP5 (ENSCATG00000037221) PAK2 (ENSCATG00000039395) PIGX (ENSCATG00000037075) CEP19 (ENSCATG00000041426) NRROS (ENSCATG00000016167) FBXO45 (ENSCATG00000043844) WDR53 (ENSCATG00000038586) SMCO1 (ENSCATG00000036930) RNF168 (ENSCATG00000036530) UBXN7 (ENSCATG00000020457) TM4SF19 (ENSCATG00000039519) DYNLT2B (ENSCATG00000008923) PCYT1A (ENSCATG00000043705) SLC51A (ENSCATG00000037449) ZDHHC19 (ENSCATG00000034893) ENSCATG00000029445 #22 TFRC (ENSCATG00000034982) TNK2 (ENSCATG00000044992) ENSCATG00000033328 MUC20 (ENSCATG00000040657) RUBCN (ENSCATG00000039381) FYTTD1 (ENSCATG00000037016) LRCH3 (ENSCATG00000042245) IQCG (ENSCATG00000044896) RPL35A (ENSCATG00000018648) LMLN (ENSCATG00000039980) ENSCATG00000030636 Hominoidea ANCESTRAL SPECIES 2 ENSGT00940000155615 ENSGT00940000154583.i ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.q.a.d ENSGT00940000158523 ENSGT00910000147988 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266.a #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000016970.h ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00390000013132.q.a.c ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 Hominidae ANCESTRAL SPECIES 2 ENSGT00940000155615 ENSGT00940000154583.i ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.q.a.d ENSGT00940000158523 ENSGT00910000147988 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266.a #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000016970.h ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00390000013132.q.a.c ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00940000154583.i ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.q.a.d ENSGT00940000158523 ENSGT00910000147988 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.b.b ##20 ENSGT00390000017740.a.b #21 ENSGT00940000153309.c.a.e.b ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266.a #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000016970.h ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00390000013132.q.a.c ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00940000155615 ENSGT00940000154583.i ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.q.a.d ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.b.b ##20 ENSGT00390000017740.a.b #21 ENSGT00940000153309.c.a.e.b ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266.a #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000016970.h ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00390000013132.q.a.c ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 Pan ANCESTRAL SPECIES 2 ENSGT00940000154583.i ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.q.a.d ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.b.b ##20 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00940000153309.c.a.e.b ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266.a #26 ENSGT00940000158273 #28 ENSGT00910000148097 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000016970.h ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00390000013132.q.a.c ENSGT00940000156027 #37 ENSGT00940000157569 Bonobo MODERN SPECIES 16 LSM3 (ENSPPAG00000034074) XPC (ENSPPAG00000043453) TMEM43 (ENSPPAG00000000804) CHCHD4 (ENSPPAG00000032925) WNT7A (ENSPPAG00000030187) FBLN2 (ENSPPAG00000015671) HDAC11 (ENSPPAG00000037567) NUP210 (ENSPPAG00000037715) ENSPPAG00000028546 IQSEC1 (ENSPPAG00000036448) RPL32 (ENSPPAG00000008188) ##20 CAND2 (ENSPPAG00000004317) #21 ENSPPAG00000036413 TMEM40 (ENSPPAG00000019163) ENSPPAG00000024005 RAF1 (ENSPPAG00000035239) #22 MKRN2 (ENSPPAG00000036523) #24 MKRN2OS (ENSPPAG00000032216) #25 TSEN2 (ENSPPAG00000035317) #26 PPARG (ENSPPAG00000029006) #28 ENSPPAG00000028973 ENSPPAG00000030837 TIMP4 (ENSPPAG00000036078) #29 SYN2 (ENSPPAG00000038622) #30 ENSPPAG00000040309 TAMM41 (ENSPPAG00000037692) #31 VGLL4 (ENSPPAG00000035709) #32 ATG7 (ENSPPAG00000040386) #33 HRH1 (ENSPPAG00000023416) #35 SLC6A1 (ENSPPAG00000042842) #37 SLC6A11 (ENSPPAG00000039217) Chimpanzee MODERN SPECIES 16 SLC6A6 (ENSPTRG00000014651) LSM3 (ENSPTRG00000014650) XPC (ENSPTRG00000014649) TMEM43 (ENSPTRG00000014648) CHCHD4 (ENSPTRG00000014647) WNT7A (ENSPTRG00000046824) FBLN2 (ENSPTRG00000014642) HDAC11 (ENSPTRG00000014641) NUP210 (ENSPTRG00000014640) ENSPTRG00000046540 IQSEC1 (ENSPTRG00000014639) ENSPTRG00000050657 #20 CAND2 (ENSPTRG00000014637) #21 ENSPTRG00000051489 TMEM40 (ENSPTRG00000014636) RAF1 (ENSPTRG00000014635) #22 MKRN2 (ENSPTRG00000014634) #24 MKRN2OS (ENSPTRG00000046408) #25 TSEN2 (ENSPTRG00000014633) #26 PPARG (ENSPTRG00000014632) #28 ENSPTRG00000045342 ENSPTRG00000043822 TIMP4 (ENSPTRG00000014630) #29 SYN2 (ENSPTRG00000052430) #30 ENSPTRG00000049448 TAMM41 (ENSPTRG00000014628) #31 VGLL4 (ENSPTRG00000014626) #32 ATG7 (ENSPTRG00000014625) #33 HRH1 (ENSPTRG00000030304) #35 ENSPTRG00000050374 SLC6A1 (ENSPTRG00000014622) #37 Human MODERN SPECIES 15 GRIP2 (ENSG00000144596) SLC6A6 (ENSG00000131389) LSM3 (ENSG00000170860) XPC (ENSG00000154767) TMEM43 (ENSG00000170876) CHCHD4 (ENSG00000163528) WNT7A (ENSG00000154764) FBLN2 (ENSG00000163520) HDAC11 (ENSG00000163517) NUP210 (ENSG00000132182) IQSEC1 (ENSG00000144711) RPL32 (ENSG00000144713) ##20 ENSG00000289809 CAND2 (ENSG00000144712) #21 TMEM40 (ENSG00000088726) RAF1 (ENSG00000132155) #22 MKRN2 (ENSG00000075975) #24 MKRN2OS (ENSG00000225526) #25 TSEN2 (ENSG00000154743) #26 PPARG (ENSG00000132170) #28 TIMP4 (ENSG00000157150) #29 SYN2 (ENSG00000157152) #30 TAMM41 (ENSG00000144559) #31 VGLL4 (ENSG00000144560) #32 ATG7 (ENSG00000197548) #33 HRH1 (ENSG00000196639) #35 SLC6A1 (ENSG00000157103) #37 SLC6A11 (ENSG00000132164) ATP2B2 (ENSG00000157087) SEC13 (ENSG00000157020) GHRL (ENSG00000157017) Gorilla MODERN SPECIES 16 SLC6A6 (ENSGGOG00000013384) LSM3 (ENSGGOG00000010006) XPC (ENSGGOG00000009997) TMEM43 (ENSGGOG00000016577) CHCHD4 (ENSGGOG00000024077) WNT7A (ENSGGOG00000012654) ENSGGOG00000042871 FBLN2 (ENSGGOG00000011561) HDAC11 (ENSGGOG00000007735) NUP210 (ENSGGOG00000015096) IQSEC1 (ENSGGOG00000001008) RPL32 (ENSGGOG00000043568) ##20 CAND2 (ENSGGOG00000001004) #21 ENSGGOG00000021954 TMEM40 (ENSGGOG00000028438) RAF1 (ENSGGOG00000023025) #22 MKRN2 (ENSGGOG00000000429) #24 ENSGGOG00000041526 #25 TSEN2 (ENSGGOG00000012488) #26 PPARG (ENSGGOG00000013117) #28 ENSGGOG00000043543 ENSGGOG00000038928 ENSGGOG00000038254 TIMP4 (ENSGGOG00000009761) #29 SYN2 (ENSGGOG00000009751) #30 ENSGGOG00000039682 #31 VGLL4 (ENSGGOG00000003500) #32 ATG7 (ENSGGOG00000003493) #33 HRH1 (ENSGGOG00000038168) #35 ENSGGOG00000016573 SLC6A1 (ENSGGOG00000000382) #37 Orangutan MODERN SPECIES 16 CCDC174 (ENSPPYG00000013405) GRIP2 (ENSPPYG00000013404) SLC6A6 (ENSPPYG00000013403) LSM3 (ENSPPYG00000013402) XPC (ENSPPYG00000013401) TMEM43 (ENSPPYG00000013400) CHCHD4 (ENSPPYG00000025890) WNT7A (ENSPPYG00000013397) FBLN2 (ENSPPYG00000013396) HDAC11 (ENSPPYG00000013395) NUP210 (ENSPPYG00000013394) IQSEC1 (ENSPPYG00000013393) ENSPPYG00000037343 #20 CAND2 (ENSPPYG00000013390) #21 TMEM40 (ENSPPYG00000013389) RAF1 (ENSPPYG00000013388) #22 MKRN2 (ENSPPYG00000013387) #24 ENSPPYG00000013631 STX19 (ENSPPYG00000013630) ARL13B (ENSPPYG00000013629) DHFR2 (ENSPPYG00000013628) NSUN3 (ENSPPYG00000037583) ENSPPYG00000013626 EPHA6 (ENSPPYG00000013624) ARL6 (ENSPPYG00000013623) CRYBG3 (ENSPPYG00000033155) RIOX2 (ENSPPYG00000013621) GABRR3 (ENSPPYG00000013620) ENSPPYG00000013618 OR5K1 (ENSPPYG00000013616) OR5K2 (ENSPPYG00000013615) Gibbon MODERN SPECIES 13 GRIP2 (ENSNLEG00000005114) SLC6A6 (ENSNLEG00000005084) LSM3 (ENSNLEG00000005079) XPC (ENSNLEG00000005000) TMEM43 (ENSNLEG00000004956) CHCHD4 (ENSNLEG00000029809) ENSNLEG00000004941 FBLN2 (ENSNLEG00000004881) HDAC11 (ENSNLEG00000004853) NUP210 (ENSNLEG00000004799) IQSEC1 (ENSNLEG00000004793) ENSNLEG00000004798 ENSNLEG00000035616 ##20 CAND2 (ENSNLEG00000004774) #21 TMEM40 (ENSNLEG00000004755) RAF1 (ENSNLEG00000004732) #22 MKRN2 (ENSNLEG00000004711) #24 MKRN2OS (ENSNLEG00000030256) #25 TSEN2 (ENSNLEG00000004696) #26 PPARG (ENSNLEG00000004650) #28 ENSNLEG00000029797 ENSNLEG00000004578 #30 TIMP4 (ENSNLEG00000004638) #29 ENSNLEG00000004559 #31 VGLL4 (ENSNLEG00000004535) #32 ATG7 (ENSNLEG00000027005) #33 HRH1 (ENSNLEG00000018917) #35 ENSNLEG00000030870 SLC6A1 (ENSNLEG00000026605) #37 SLC6A11 (ENSNLEG00000004525) ENSNLEG00000026798 Platyrrhini ANCESTRAL SPECIES 18 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.p ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.b.a.b ##20 ENSGT00940000158890.q ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509.e #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B.v ENSGT00910000147252 Cebidae ANCESTRAL SPECIES 14 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.p ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.b.b ##20 ENSGT00940000158890.q ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509.e #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B.v ENSGT00910000147252 Cebidae_a ANCESTRAL SPECIES 47 ENSGT00910000146921 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 ENSGT00390000009671 ENSGT00390000013132.p ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000153973.c.a.b.b ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509.e #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B.v ENSGT00910000147252 Bolivian squirrel monkey MODERN SPECIES 62 ENSSBOG00000024248 PLAAT1 (ENSSBOG00000030423) ATP13A5 (ENSSBOG00000030531) ATP13A4 (ENSSBOG00000032487) OPA1 (ENSSBOG00000021973) HES1 (ENSSBOG00000028215) ENSSBOG00000033814 CPN2 (ENSSBOG00000014283) LRRC15 (ENSSBOG00000031469) ATP13A3 (ENSSBOG00000005544) TMEM44 (ENSSBOG00000020794) LSG1 (ENSSBOG00000034938) FAM43A (ENSSBOG00000018424) XXYLT1 (ENSSBOG00000034641) ACAP2 (ENSSBOG00000029437) RAF1 (ENSSBOG00000015492) #22 MKRN2 (ENSSBOG00000034434) #24 MKRN2OS (ENSSBOG00000033896) #25 TSEN2 (ENSSBOG00000035499) #26 PPARG (ENSSBOG00000005712) #28 ENSSBOG00000030292 #30 TIMP4 (ENSSBOG00000032293) #29 TAMM41 (ENSSBOG00000034374) #31 VGLL4 (ENSSBOG00000026167) #32 ATG7 (ENSSBOG00000024304) #33 HRH1 (ENSSBOG00000015886) #35 SLC6A1 (ENSSBOG00000022090) #37 SLC6A11 (ENSSBOG00000029132) ATP2B2 (ENSSBOG00000020057) ENSSBOG00000020409 ENSSBOG00000023709 Capuchin MODERN SPECIES 281 IQSEC1 (ENSCCAG00000024388) RPL32 (ENSCCAG00000025373) ##20 CAND2 (ENSCCAG00000032849) #21 TMEM40 (ENSCCAG00000020743) RAF1 (ENSCCAG00000023070) #22 MKRN2 (ENSCCAG00000019802) #24 ENSCCAG00000022711 MKRN2OS (ENSCCAG00000031553) #25 TSEN2 (ENSCCAG00000037851) #26 PPARG (ENSCCAG00000027364) #28 SYN2 (ENSCCAG00000034848) #30 TIMP4 (ENSCCAG00000035892) #29 TAMM41 (ENSCCAG00000025773) #31 VGLL4 (ENSCCAG00000032615) #32 ATG7 (ENSCCAG00000035255) #33 SLC6A1 (ENSCCAG00000026677) #37 SLC6A11 (ENSCCAG00000030058) ATP2B2 (ENSCCAG00000032907) SEC13 (ENSCCAG00000026715) GHRL (ENSCCAG00000022227) Marmoset MODERN SPECIES 6 SLC6A6 (ENSCJAG00000016992) ENSCJAG00000079599 ENSCJAG00000042664 XPC (ENSCJAG00000016952) ENSCJAG00000087072 ENSCJAG00000072125 TMEM43 (ENSCJAG00000016924) WNT7A (ENSCJAG00000040771) FBLN2 (ENSCJAG00000016873) HDAC11 (ENSCJAG00000016844) NUP210 (ENSCJAG00000016795) IQSEC1 (ENSCJAG00000016781) ENSCJAG00000061647 CAND2 (ENSCJAG00000016770) #21 TMEM40 (ENSCJAG00000016751) RAF1 (ENSCJAG00000016737) #22 ENSCJAG00000016733 #24 MKRN2OS (ENSCJAG00000040602) #25 TSEN2 (ENSCJAG00000080511) #26 ENSCJAG00000075859 ENSCJAG00000086839 PPARG (ENSCJAG00000016687) #28 TIMP4 (ENSCJAG00000038791) #29 SYN2 (ENSCJAG00000016647) #30 VGLL4 (ENSCJAG00000016643) #32 ENSCJAG00000058577 ATG7 (ENSCJAG00000016583) #33 HRH1 (ENSCJAG00000043961) #35 ENSCJAG00000084863 ENSCJAG00000070697 ENSCJAG00000072589 Mas night monkey MODERN SPECIES 321 CCDC174 (ENSANAG00000036650) GRIP2 (ENSANAG00000037475) SLC6A6 (ENSANAG00000025733) LSM3 (ENSANAG00000034627) XPC (ENSANAG00000021069) TMEM43 (ENSANAG00000036418) CHCHD4 (ENSANAG00000034814) WNT7A (ENSANAG00000033071) FBLN2 (ENSANAG00000027135) HDAC11 (ENSANAG00000035737) NUP210 (ENSANAG00000036448) IQSEC1 (ENSANAG00000028368) ENSANAG00000020589 ##20 CAND2 (ENSANAG00000020366) #21 TMEM40 (ENSANAG00000036821) RAF1 (ENSANAG00000031934) #22 MKRN2 (ENSANAG00000022646) #24 MKRN2OS (ENSANAG00000026143) #25 TSEN2 (ENSANAG00000026891) #26 PPARG (ENSANAG00000020115) #28 TIMP4 (ENSANAG00000032042) #29 SYN2 (ENSANAG00000021892) #30 TAMM41 (ENSANAG00000037740) #31 VGLL4 (ENSANAG00000038129) #32 ENSANAG00000012369 ENSANAG00000032758 #33 HRH1 (ENSANAG00000031051) #35 ENSANAG00000019292 CIDEC (ENSANAG00000024285) IL17RE (ENSANAG00000022892) ENSANAG00000021183 Tarsier MODERN SPECIES 5029 RAF1 (ENSTSYG00000007438) #22 MKRN2 (ENSTSYG00000007429) #24 ENSTSYG00000030920 MKRN2OS (ENSTSYG00000029616) #25 TSEN2 (ENSTSYG00000010816) #26 PPARG (ENSTSYG00000006950) #28 GABRR1 (ENSTSYG00000033942) PM20D2 (ENSTSYG00000027051) Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Lemuriformes ANCESTRAL SPECIES 76 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 ENSGT00940000157312 Mouse lemur MODERN SPECIES 15 CPEB4 (ENSMICG00000029322) C5orf47 (ENSMICG00000047468) NSG2 (ENSMICG00000035993) MSX2 (ENSMICG00000026941) ENSMICG00000028823 PLXND1 (ENSMICG00000008079) #14 H1-8 (ENSMICG00000030377) #15 RHO (ENSMICG00000047910) #16 IFT122 (ENSMICG00000008033) #17 MBD4 (ENSMICG00000008022) #18 EFCAB12 (ENSMICG00000008010) #19 ENSMICG00000034607 #20 CAND2 (ENSMICG00000041434) #21 TMEM40 (ENSMICG00000003715) ENSMICG00000033639 RAF1 (ENSMICG00000012172) #22 MKRN2 (ENSMICG00000012164) #24 MKRN2OS (ENSMICG00000038087) #25 TSEN2 (ENSMICG00000016672) #26 PPARG (ENSMICG00000016663) #28 TIMP4 (ENSMICG00000045817) #29 SYN2 (ENSMICG00000003565) #30 ENSMICG00000012731 TAMM41 (ENSMICG00000016586) #31 VGLL4 (ENSMICG00000016559) #32 ENSMICG00000035458 ATG7 (ENSMICG00000016547) #33 SLC6A1 (ENSMICG00000003055) #37 SLC6A11 (ENSMICG00000033698) ATP2B2 (ENSMICG00000002406) ACAD9 (ENSMICG00000007418) Lemuriformes_a ANCESTRAL SPECIES 162 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 ENSGT00940000157312 Coquerels sifaka MODERN SPECIES 614 PLXND1 (ENSPCOG00000027312) #14 H1-8 (ENSPCOG00000024479) #15 RHO (ENSPCOG00000024236) #16 IFT122 (ENSPCOG00000023934) #17 ENSPCOG00000018583 #18 EFCAB12 (ENSPCOG00000020532) #19 ENSPCOG00000026378 #20 CAND2 (ENSPCOG00000020368) #21 TMEM40 (ENSPCOG00000027785) ENSPCOG00000024646 RAF1 (ENSPCOG00000013436) #22 MKRN2 (ENSPCOG00000013481) #24 MKRN2OS (ENSPCOG00000027519) #25 TSEN2 (ENSPCOG00000019328) #26 PPARG (ENSPCOG00000017510) #28 SYN2 (ENSPCOG00000020181) #30 TIMP4 (ENSPCOG00000025232) #29 TAMM41 (ENSPCOG00000021554) #31 VGLL4 (ENSPCOG00000016845) #32 ATG7 (ENSPCOG00000021597) #33 SLC6A1 (ENSPCOG00000027376) #37 SLC6A11 (ENSPCOG00000012550) ATP2B2 (ENSPCOG00000022973) ENSPCOG00000027035 ACAD9 (ENSPCOG00000028509) IQSEC1 (ENSPCOG00000022781) Greater bamboo lemur MODERN SPECIES 130 ENSPSMG00000002470 #14 H1-8 (ENSPSMG00000002466) #15 RHO (ENSPSMG00000002457) #16 IFT122 (ENSPSMG00000001543) #17 MBD4 (ENSPSMG00000001016) #18 EFCAB12 (ENSPSMG00000000969) #19 ENSPSMG00000000953 ##20 CAND2 (ENSPSMG00000000926) #21 ENSPSMG00000000888 TMEM40 (ENSPSMG00000000837) RAF1 (ENSPSMG00000000725) #22 MKRN2 (ENSPSMG00000000636) #24 MKRN2OS (ENSPSMG00000000584) #25 TSEN2 (ENSPSMG00000000537) #26 PPARG (ENSPSMG00000000463) #28 TIMP4 (ENSPSMG00000000419) #29 SYN2 (ENSPSMG00000000398) #30 TAMM41 (ENSPSMG00000000346) #31 VGLL4 (ENSPSMG00000000320) #32 ATG7 (ENSPSMG00000000247) #33 HRH1 (ENSPSMG00000000102) #35 SLC6A1 (ENSPSMG00000025445) #37 SLC6A11 (ENSPSMG00000025382) Bushbaby MODERN SPECIES 216 NR2C2 (ENSOGAG00000014038) #9 MRPS25 (ENSOGAG00000014041) #10 RBSN (ENSOGAG00000014042) #11 TRH (ENSOGAG00000017199) #12 ENSOGAG00000031381 TMCC1 (ENSOGAG00000010283) #13 ENSOGAG00000032612 PLXND1 (ENSOGAG00000010266) #14 RHO (ENSOGAG00000010259) #16 IFT122 (ENSOGAG00000010245) #17 MBD4 (ENSOGAG00000010236) #18 ENSOGAG00000010234 #19 RPL32 (ENSOGAG00000028498) ##20 CAND2 (ENSOGAG00000028928) #21 TMEM40 (ENSOGAG00000003261) RAF1 (ENSOGAG00000003256) #22 MKRN2 (ENSOGAG00000003255) #24 MKRN2OS (ENSOGAG00000031425) #25 ENSOGAG00000002976 #26 PPARG (ENSOGAG00000002971) #28 SYN2 (ENSOGAG00000016700) #30 TIMP4 (ENSOGAG00000016704) #29 ENSOGAG00000006595 ENSOGAG00000031076 TAMM41 (ENSOGAG00000030657) #31 VGLL4 (ENSOGAG00000016184) #32 ATG7 (ENSOGAG00000016175) #33 HRH1 (ENSOGAG00000016172) #35 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT00930000152979 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT01030000235208 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000156084 #22 Hedgehog MODERN SPECIES 2892 RAF1 (ENSEEUG00000011360) #22 Common shrew MODERN SPECIES 2149 RAF1 (ENSSARG00000007569) #22 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT01030000235208 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 Artiodactyla ANCESTRAL SPECIES 2 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00930000152979 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT01010000229800 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b ##20 ENSGT00940000153973.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 ENSGT00940000153393.B Artiodactyla_a ANCESTRAL SPECIES 18 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00930000152979 ENSGT00940000175447 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT01010000229800 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 ENSGT00940000153393.B Artiodactyla_b ANCESTRAL SPECIES 21 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT01010000229800 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 ENSGT00940000153393.B Cetacea ANCESTRAL SPECIES 7 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00930000152979 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT01010000229800 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B.`b ENSGT00390000004064 Odontoceti ANCESTRAL SPECIES 5 ENSGT00940000158393 #9 ENSGT00640000091558.n #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00930000152979 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B.`b ENSGT00390000004064 Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558.n #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B.`b ENSGT00390000004064 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558.n #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B.`b ENSGT00390000004064 Monodontidae ANCESTRAL SPECIES 4 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558.n #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B.`b ENSGT00390000004064 Narwhal MODERN SPECIES 310 FGD5 (ENSMMNG00015012622) #8 NR2C2 (ENSMMNG00015012595) #9 ENSMMNG00015012540 #10 RBSN (ENSMMNG00015012525) #11 TRH (ENSMMNG00015012517) #12 TMCC1 (ENSMMNG00015012483) #13 PLXND1 (ENSMMNG00015012370) #14 H1-8 (ENSMMNG00015012313) #15 RHO (ENSMMNG00015012293) #16 IFT122 (ENSMMNG00015012203) #17 MBD4 (ENSMMNG00015012156) #18 EFCAB12 (ENSMMNG00015012144) #19 RPL32 (ENSMMNG00015012118) ##20 CAND2 (ENSMMNG00015012039) #21 TMEM40 (ENSMMNG00015012000) RAF1 (ENSMMNG00015011951) #22 MKRN2 (ENSMMNG00015011904) #24 MKRN2OS (ENSMMNG00015011881) #25 TSEN2 (ENSMMNG00015011810) #26 PPARG (ENSMMNG00015011771) #28 TIMP4 (ENSMMNG00015011737) #29 SYN2 (ENSMMNG00015011708) #30 TAMM41 (ENSMMNG00015011672) #31 VGLL4 (ENSMMNG00015011616) #32 ATG7 (ENSMMNG00015011505) #33 HRH1 (ENSMMNG00015011469) #35 SLC6A1 (ENSMMNG00015011419) #37 SLC6A11 (ENSMMNG00015011359) ENSMMNG00015011333 ATP2B2 (ENSMMNG00015011282) SEC13 (ENSMMNG00015011196) Beluga whale MODERN SPECIES 66 NR2C2 (ENSDLEG00000008987) #9 ENSDLEG00000008967 #10 ENSDLEG00000008956 #10 RBSN (ENSDLEG00000008914) #11 TRH (ENSDLEG00000008893) #12 TMCC1 (ENSDLEG00000008842) #13 PLXND1 (ENSDLEG00000008614) #14 H1-8 (ENSDLEG00000008521) #15 RHO (ENSDLEG00000008470) #16 IFT122 (ENSDLEG00000008304) #17 MBD4 (ENSDLEG00000008239) #18 ENSDLEG00000008201 #19 RPL32 (ENSDLEG00000008175) ##20 CAND2 (ENSDLEG00000008059) #21 TMEM40 (ENSDLEG00000008007) RAF1 (ENSDLEG00000007956) #22 MKRN2 (ENSDLEG00000021478) #24 ENSDLEG00000021477 ENSDLEG00000021458 #28 TIMP4 (ENSDLEG00000021450) #29 SYN2 (ENSDLEG00000021448) #30 TAMM41 (ENSDLEG00000021438) #31 ATG7 (ENSDLEG00000021427) #33 HRH1 (ENSDLEG00000021424) #35 SLC6A1 (ENSDLEG00000021420) #37 SLC6A11 (ENSDLEG00000021059) ATP2B2 (ENSDLEG00000015650) SEC13 (ENSDLEG00000015045) GHRL (ENSDLEG00000015002) ENSDLEG00000014986 ENSDLEG00000014979 Vaquita MODERN SPECIES 2 NR2C2 (ENSPSNG00000022710) #9 ENSPSNG00000022711 #10 RBSN (ENSPSNG00000022712) #11 TRH (ENSPSNG00000022713) #12 ENSPSNG00000022714 #13 ENSPSNG00000022717 #13 PLXND1 (ENSPSNG00000022718) #14 H1-8 (ENSPSNG00000022719) #15 RHO (ENSPSNG00000022720) #16 IFT122 (ENSPSNG00000022721) #17 MBD4 (ENSPSNG00000022722) #18 EFCAB12 (ENSPSNG00000022723) #19 RPL32 (ENSPSNG00000022724) ##20 CAND2 (ENSPSNG00000009832) #21 TMEM40 (ENSPSNG00000010002) RAF1 (ENSPSNG00000010184) #22 MKRN2 (ENSPSNG00000010288) #24 MKRN2OS (ENSPSNG00000010409) #25 TSEN2 (ENSPSNG00000010460) #26 PPARG (ENSPSNG00000010554) #28 SYN2 (ENSPSNG00000010964) #30 TIMP4 (ENSPSNG00000011214) #29 TAMM41 (ENSPSNG00000011313) #31 VGLL4 (ENSPSNG00000011411) #32 ATG7 (ENSPSNG00000011678) #33 HRH1 (ENSPSNG00000012320) #35 SLC6A1 (ENSPSNG00000012418) #37 SLC6A11 (ENSPSNG00000013275) ATP2B2 (ENSPSNG00000013827) ENSPSNG00000015998 GHRL (ENSPSNG00000016272) Sperm whale MODERN SPECIES 9 NR2C2 (ENSPCTG00005005417) #9 MRPS25 (ENSPCTG00005005475) #10 RBSN (ENSPCTG00005005519) #11 TMCC1 (ENSPCTG00005005558) #13 ENSPCTG00005005601 TRH (ENSPCTG00005005621) #12 ENSPCTG00005005684 #14 ENSPCTG00005005647 H1-8 (ENSPCTG00005005747) #15 RHO (ENSPCTG00005005781) #16 IFT122 (ENSPCTG00005005825) #17 MBD4 (ENSPCTG00005005918) #18 EFCAB12 (ENSPCTG00005005960) #19 ENSPCTG00005006016 #20 ENSPCTG00005006042 #21 RAF1 (ENSPCTG00005006081) #22 MKRN2 (ENSPCTG00005006141) #24 MKRN2OS (ENSPCTG00005006199) #25 PPARG (ENSPCTG00005006236) #28 SYN2 (ENSPCTG00005006330) #30 TIMP4 (ENSPCTG00005006355) #29 TAMM41 (ENSPCTG00005006384) #31 VGLL4 (ENSPCTG00005006432) #32 ATG7 (ENSPCTG00005006565) #33 HRH1 (ENSPCTG00005006823) #35 SLC6A1 (ENSPCTG00005006885) #37 SLC6A11 (ENSPCTG00005007501) SEC13 (ENSPCTG00005007576) GHRL (ENSPCTG00005007648) TATDN2 (ENSPCTG00005007678) IRAK2 (ENSPCTG00005007701) Blue whale MODERN SPECIES 2 NR2C2 (ENSBMSG00010010995) #9 MRPS25 (ENSBMSG00010010976) #10 RBSN (ENSBMSG00010010963) #11 TRH (ENSBMSG00010010946) #12 TMCC1 (ENSBMSG00010010919) #13 PLXND1 (ENSBMSG00010010833) #14 ENSBMSG00010010803 RHO (ENSBMSG00010010727) #16 IFT122 (ENSBMSG00010010593) #17 ENSBMSG00010010542 ENSBMSG00010010533 #18 EFCAB12 (ENSBMSG00010010503) #19 RPL32 (ENSBMSG00010010483) ##20 CAND2 (ENSBMSG00010010467) #21 TMEM40 (ENSBMSG00010010438) RAF1 (ENSBMSG00010010408) #22 MKRN2 (ENSBMSG00010010365) #24 MKRN2OS (ENSBMSG00010010343) #25 TSEN2 (ENSBMSG00010010317) #26 PPARG (ENSBMSG00010010135) #28 TIMP4 (ENSBMSG00010010106) #29 SYN2 (ENSBMSG00010010076) #30 TAMM41 (ENSBMSG00010010044) #31 ENSBMSG00010010031 ENSBMSG00010009994 #32 ATG7 (ENSBMSG00010009931) #33 HRH1 (ENSBMSG00010009905) #35 ENSBMSG00010009900 SLC6A1 (ENSBMSG00010009806) #37 SLC6A11 (ENSBMSG00010009702) ATP2B2 (ENSBMSG00010008618) Pecora ANCESTRAL SPECIES 17 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 ENSGT00940000153393.B Percora_a ANCESTRAL SPECIES 19 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 ENSGT00940000153393.B Bovidae ANCESTRAL SPECIES 19 ENSGT00940000160690 #35 ENSGT00390000017509 #33 ENSGT00390000003282.B #32 ENSGT00390000000616.k #31 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616.l #31 ENSGT00390000007159 #11 ENSGT00640000091558 #10 ENSGT00940000158393 #9 ENSGT00940000157922 #8 ENSGT00940000153655.B #7 ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 Caprinae ANCESTRAL SPECIES 15 ENSGT00940000160690 #35 ENSGT00390000017509 #33 ENSGT00390000003282.B #32 ENSGT00390000000616.k #31 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616.l #31 ENSGT00390000007159 #11 ENSGT00640000091558 #10 ENSGT00940000158393 #9 ENSGT00940000157922 #8 ENSGT00940000153655.B #7 ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 Goat MODERN SPECIES 14 HRH1 (ENSCHIG00000012387) #35 ATG7 (ENSCHIG00000018813) #33 VGLL4 (ENSCHIG00000019976) #32 ENSCHIG00000002443 #31 TRH (ENSCHIG00000025325) #12 ENSCHIG00000015861 #13 ENSCHIG00000016746 #13 PLXND1 (ENSCHIG00000008763) #14 H1-8 (ENSCHIG00000015286) #15 RHO (ENSCHIG00000019086) #16 IFT122 (ENSCHIG00000018009) #17 MBD4 (ENSCHIG00000009760) #18 EFCAB12 (ENSCHIG00000024180) #19 RPL32 (ENSCHIG00000011099) ##20 CAND2 (ENSCHIG00000017799) #21 RAF1 (ENSCHIG00000006954) #22 MKRN2 (ENSCHIG00000021098) #24 MKRN2OS (ENSCHIG00000013445) #25 TSEN2 (ENSCHIG00000013772) #26 PPARG (ENSCHIG00000015877) #28 SYN2 (ENSCHIG00000024912) #30 TIMP4 (ENSCHIG00000017995) #29 ENSCHIG00000027078 #31 RBSN (ENSCHIG00000019361) #11 MRPS25 (ENSCHIG00000009931) #10 NR2C2 (ENSCHIG00000008676) #9 FGD5 (ENSCHIG00000023792) #8 C3orf20 (ENSCHIG00000009719) #7 CCDC174 (ENSCHIG00000008286) GRIP2 (ENSCHIG00000016620) SLC6A6 (ENSCHIG00000024785) Rambouillet Sheep MODERN SPECIES 10 ATG7 (ENSOARG00020025688) #33 VGLL4 (ENSOARG00020025701) #32 ENSOARG00020025707 TAMM41 (ENSOARG00020025710) #31 TRH (ENSOARG00020025716) #12 TMCC1 (ENSOARG00020025721) #13 PLXND1 (ENSOARG00020025735) #14 ENSOARG00020025760 RHO (ENSOARG00020025763) #16 IFT122 (ENSOARG00020025765) #17 MBD4 (ENSOARG00020025769) #18 EFCAB12 (ENSOARG00020025775) #19 RPL32 (ENSOARG00020025785) ##20 CAND2 (ENSOARG00020025794) #21 TMEM40 (ENSOARG00020025803) RAF1 (ENSOARG00020025810) #22 MKRN2 (ENSOARG00020025818) #24 MKRN2OS (ENSOARG00020025824) #25 TSEN2 (ENSOARG00020025828) #26 PPARG (ENSOARG00020025834) #28 SYN2 (ENSOARG00020025846) #30 ENSOARG00020025856 #29 RBSN (ENSOARG00020025862) #11 MRPS25 (ENSOARG00020025871) #10 NR2C2 (ENSOARG00020025878) #9 C3orf20 (ENSOARG00020025893) #7 CCDC174 (ENSOARG00020025904) GRIP2 (ENSOARG00020025919) SLC6A6 (ENSOARG00020025943) ENSOARG00020025950 TMEM43 (ENSOARG00020025957) Bovinae ANCESTRAL SPECIES 16 ENSGT00390000003282.B #32 ENSGT00390000000616.k #31 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT00930000152979 ENSGT00940000175447 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616.l #31 ENSGT00390000007159 #11 ENSGT00640000091558 #10 ENSGT00940000158393 #9 ENSGT00940000157922 #8 ENSGT00940000153655.B #7 ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 Bos ANCESTRAL SPECIES 16 ENSGT00390000003282.B #32 ENSGT00390000000616.k #31 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT00930000152979 ENSGT00940000175447 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616.l #31 ENSGT00390000007159 #11 ENSGT00640000091558 #10 ENSGT00940000158393 #9 ENSGT00940000157922 #8 ENSGT00940000153655.B #7 ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 Bos_a ANCESTRAL SPECIES 9 ENSGT00390000017509 #33 ENSGT00390000003282.B #32 ENSGT00390000000616.k #31 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT00930000152979 ENSGT00940000175447 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000007159 #11 ENSGT00640000091558 #10 ENSGT00940000158393 #9 ENSGT00940000157922 #8 ENSGT00940000153655.B #7 ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 ENSGT00390000013951 ENSGT00390000005194 Wild yak MODERN SPECIES 1473 TRH (ENSBMUG00000009602) #12 ENSBMUG00000009609 TMCC1 (ENSBMUG00000009638) #13 ENSBMUG00000009719 ENSBMUG00000009729 RHO (ENSBMUG00000009767) #16 IFT122 (ENSBMUG00000010042) #17 MBD4 (ENSBMUG00000010711) #18 EFCAB12 (ENSBMUG00000010745) #19 RPL32 (ENSBMUG00000010768) ##20 CAND2 (ENSBMUG00000010855) #21 TMEM40 (ENSBMUG00000010953) ENSBMUG00000010983 RAF1 (ENSBMUG00000011029) #22 MKRN2 (ENSBMUG00000011049) #24 MKRN2OS (ENSBMUG00000011070) #25 PPARG (ENSBMUG00000011177) #28 SYN2 (ENSBMUG00000011214) #30 ENSBMUG00000011252 #29 Domestic yak MODERN SPECIES 14 ENSBGRG00000024715 #32 TAMM41 (ENSBGRG00000024630) #31 TRH (ENSBGRG00000024598) #12 ENSBGRG00000024583 TMCC1 (ENSBGRG00000024493) #13 ENSBGRG00000024462 ENSBGRG00000024437 ENSBGRG00000024409 #15 RHO (ENSBGRG00000024373) #16 IFT122 (ENSBGRG00000023990) #17 MBD4 (ENSBGRG00000023851) #18 EFCAB12 (ENSBGRG00000023675) #19 RPL32 (ENSBGRG00000023548) ##20 CAND2 (ENSBGRG00000023333) #21 TMEM40 (ENSBGRG00000023210) RAF1 (ENSBGRG00000022891) #22 MKRN2 (ENSBGRG00000022735) #24 MKRN2OS (ENSBGRG00000022696) #25 ENSBGRG00000022315 #28 TIMP4 (ENSBGRG00000022226) #29 SYN2 (ENSBGRG00000021920) #30 RBSN (ENSBGRG00000021762) #11 MRPS25 (ENSBGRG00000021676) #10 NR2C2 (ENSBGRG00000021614) #9 FGD5 (ENSBGRG00000021386) #8 C3orf20 (ENSBGRG00000021321) #7 CCDC174 (ENSBGRG00000021048) GRIP2 (ENSBGRG00000020144) SLC6A6 (ENSBGRG00000019545) ENSBGRG00000019432 XPC (ENSBGRG00000018846) Bos_b ANCESTRAL SPECIES 17 ENSGT00940000160690 #35 ENSGT00390000017509 #33 ENSGT00390000003282.B #32 ENSGT00390000000616.k #31 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616.l #31 ENSGT00390000007159 #11 ENSGT00640000091558 #10 ENSGT00940000158393 #9 ENSGT00940000157922 #8 ENSGT00940000153655.B #7 ENSGT00440000033958 ENSGT00940000155615 ENSGT00940000154583 Hybrid Bos Indicus MODERN SPECIES 14 HRH1 (ENSBIXG00005024745) #35 ATG7 (ENSBIXG00005024877) #33 ENSBIXG00005025048 #32 TRH (ENSBIXG00005025098) #12 ENSBIXG00005025108 ENSBIXG00005025137 TMCC1 (ENSBIXG00005025216) #13 PLXND1 (ENSBIXG00005025560) #14 ENSBIXG00005025593 #15 RHO (ENSBIXG00005025616) #16 IFT122 (ENSBIXG00005025735) #17 MBD4 (ENSBIXG00005025831) #18 RPL32 (ENSBIXG00005025898) ##20 CAND2 (ENSBIXG00005025955) #21 TMEM40 (ENSBIXG00005026020) RAF1 (ENSBIXG00005004450) #22 MKRN2 (ENSBIXG00005026143) #24 MKRN2OS (ENSBIXG00005026155) #25 ENSBIXG00005026465 #28 TIMP4 (ENSBIXG00005026516) #29 SYN2 (ENSBIXG00005026582) #30 RBSN (ENSBIXG00005026693) #11 MRPS25 (ENSBIXG00005026733) #10 NR2C2 (ENSBIXG00005026766) #9 FGD5 (ENSBIXG00005027347) #8 C3orf20 (ENSBIXG00005027421) #7 CCDC174 (ENSBIXG00005027454) ENSBIXG00005027475 ENSBIXG00005027488 GRIP2 (ENSBIXG00005027668) SLC6A6 (ENSBIXG00005027782) Cow MODERN SPECIES 14 SLC6A1 (ENSBTAG00000005857) #37 ATG7 (ENSBTAG00000035827) #33 VGLL4 (ENSBTAG00000018600) #32 TAMM41 (ENSBTAG00000003328) #31 TRH (ENSBTAG00000005306) #12 TMCC1 (ENSBTAG00000006614) #13 PLXND1 (ENSBTAG00000001814) #14 H1-8 (ENSBTAG00000001812) #15 RHO (ENSBTAG00000001310) #16 IFT122 (ENSBTAG00000019121) #17 MBD4 (ENSBTAG00000021645) #18 EFCAB12 (ENSBTAG00000021643) #19 RPL32 (ENSBTAG00000015283) ##20 CAND2 (ENSBTAG00000015273) #21 TMEM40 (ENSBTAG00000000161) RAF1 (ENSBTAG00000045748) #22 MKRN2 (ENSBTAG00000004512) #24 MKRN2OS (ENSBTAG00000024991) #25 TSEN2 (ENSBTAG00000037980) #26 PPARG (ENSBTAG00000001333) #28 SYN2 (ENSBTAG00000020260) #30 TIMP4 (ENSBTAG00000020263) #29 ENSBTAG00000031115 #31 RBSN (ENSBTAG00000013725) #11 MRPS25 (ENSBTAG00000013723) #10 NR2C2 (ENSBTAG00000013716) #9 FGD5 (ENSBTAG00000006789) #8 C22H3orf20 (ENSBTAG00000040133) #7 CCDC174 (ENSBTAG00000038298) GRIP2 (ENSBTAG00000011896) SLC6A6 (ENSBTAG00000011088) American bison MODERN SPECIES 3340 ATG7 (ENSBBBG00000012188) #33 VGLL4 (ENSBBBG00000012100) #32 TAMM41 (ENSBBBG00000012063) #31 TRH (ENSBBBG00000012040) #12 ENSBBBG00000012036 TMCC1 (ENSBBBG00000012034) #13 ENSBBBG00000012012 ENSBBBG00000012007 RHO (ENSBBBG00000012003) #16 IFT122 (ENSBBBG00000002240) #17 MBD4 (ENSBBBG00000011698) #18 EFCAB12 (ENSBBBG00000011681) #19 RPL32 (ENSBBBG00000002148) ##20 CAND2 (ENSBBBG00000002144) #21 TMEM40 (ENSBBBG00000011569) RAF1 (ENSBBBG00000011493) #22 MKRN2 (ENSBBBG00000011440) #24 MKRN2OS (ENSBBBG00000006934) #25 TSEN2 (ENSBBBG00000002087) #26 PPARG (ENSBBBG00000011336) #28 SYN2 (ENSBBBG00000011280) #30 TIMP4 (ENSBBBG00000011264) #29 RBSN (ENSBBBG00000011250) #11 MRPS25 (ENSBBBG00000011234) #10 NR2C2 (ENSBBBG00000011226) #9 C3orf20 (ENSBBBG00000011153) #7 CCDC174 (ENSBBBG00000002003) GRIP2 (ENSBBBG00000011088) SLC6A6 (ENSBBBG00000010987) LSM3 (ENSBBBG00000007967) XPC (ENSBBBG00000001954) Siberian musk deer MODERN SPECIES 1221 NR2C2 (ENSMMSG00000024042) #9 MRPS25 (ENSMMSG00000024052) #10 RBSN (ENSMMSG00000024056) #11 TRH (ENSMMSG00000024061) #12 ENSMMSG00000024063 TMCC1 (ENSMMSG00000024064) #13 PLXND1 (ENSMMSG00000024073) #14 ENSMMSG00000024082 #15 RHO (ENSMMSG00000024086) #16 IFT122 (ENSMMSG00000024092) #17 MBD4 (ENSMMSG00000024114) #18 EFCAB12 (ENSMMSG00000024116) #19 RPL32 (ENSMMSG00000024124) ##20 CAND2 (ENSMMSG00000024132) #21 TMEM40 (ENSMMSG00000024144) RAF1 (ENSMMSG00000024157) #22 MKRN2 (ENSMMSG00000014895) #24 MKRN2OS (ENSMMSG00000014926) #25 TSEN2 (ENSMMSG00000014963) #26 PPARG (ENSMMSG00000015004) #28 SYN2 (ENSMMSG00000015141) #30 TIMP4 (ENSMMSG00000015209) #29 TAMM41 (ENSMMSG00000015235) #31 VGLL4 (ENSMMSG00000015264) #32 ATG7 (ENSMMSG00000015338) #33 HRH1 (ENSMMSG00000015454) #35 SLC6A1 (ENSMMSG00000015486) #37 SLC6A11 (ENSMMSG00000015601) ATP2B2 (ENSMMSG00000015764) SEC13 (ENSMMSG00000018353) ENSMMSG00000018446 Yarkand deer MODERN SPECIES 16 VGLL4 (ENSCHYG00000017989) #32 TAMM41 (ENSCHYG00000017796) #31 TRH (ENSCHYG00000017738) #12 TMCC1 (ENSCHYG00000017484) #13 ENSCHYG00000017294 #14 H1-8 (ENSCHYG00000017241) #15 RHO (ENSCHYG00000017188) #16 IFT122 (ENSCHYG00000015047) #17 MBD4 (ENSCHYG00000014755) #18 EFCAB12 (ENSCHYG00000014606) #19 ENSCHYG00000014488 ##20 ENSCHYG00000014472 CAND2 (ENSCHYG00000014141) #21 TMEM40 (ENSCHYG00000013848) ENSCHYG00000013805 RAF1 (ENSCHYG00000025496) #22 MKRN2 (ENSCHYG00000025428) #24 MKRN2OS (ENSCHYG00000025406) #25 TSEN2 (ENSCHYG00000025333) #26 PPARG (ENSCHYG00000025198) #28 TIMP4 (ENSCHYG00000025170) #29 ENSCHYG00000025128 #30 RBSN (ENSCHYG00000025089) #11 ENSCHYG00000025047 #10 NR2C2 (ENSCHYG00000024864) #9 FGD5 (ENSCHYG00000024639) #8 C3orf20 (ENSCHYG00000024531) #7 ENSCHYG00000024372 GRIP2 (ENSCHYG00000024067) SLC6A6 (ENSCHYG00000023942) LSM3 (ENSCHYG00000023916) Camelidae ANCESTRAL SPECIES 7 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00930000152979 ENSGT00940000175447 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.b ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Arabian camel MODERN SPECIES 8 MRPS25 (ENSCDRG00005003419) #10 RBSN (ENSCDRG00005003390) #11 TRH (ENSCDRG00005003364) #12 TMCC1 (ENSCDRG00005018594) #13 PLXND1 (ENSCDRG00005018551) #14 ENSCDRG00005018533 #14 ENSCDRG00005018504 ENSCDRG00005018477 RHO (ENSCDRG00005018442) #16 IFT122 (ENSCDRG00005018267) #17 MBD4 (ENSCDRG00005018206) #18 EFCAB12 (ENSCDRG00005018119) #19 ENSCDRG00005018038 ##20 CAND2 (ENSCDRG00005017872) #21 TMEM40 (ENSCDRG00005017673) RAF1 (ENSCDRG00005017576) #22 MKRN2 (ENSCDRG00005017406) #24 MKRN2OS (ENSCDRG00005017382) #25 TSEN2 (ENSCDRG00005017293) #26 PPARG (ENSCDRG00005017141) #28 TIMP4 (ENSCDRG00005017087) #29 SYN2 (ENSCDRG00005017059) #30 TAMM41 (ENSCDRG00005016988) #31 VGLL4 (ENSCDRG00005016647) #32 ATG7 (ENSCDRG00005016438) #33 HRH1 (ENSCDRG00005016405) #35 SLC6A1 (ENSCDRG00005016134) #37 SLC6A11 (ENSCDRG00005015983) ATP2B2 (ENSCDRG00005015469) SEC13 (ENSCDRG00005015206) GHRL (ENSCDRG00005015107) Alpaca MODERN SPECIES 1304 TMEM40 (ENSVPAG00000011071) RAF1 (ENSVPAG00000011066) #22 MKRN2 (ENSVPAG00000011064) #24 ENSVPAG00000011061 #26 PPARG (ENSVPAG00000011059) #28 TIMP4 (ENSVPAG00000011058) #29 ENSVPAG00000011052 #30 Suina ANCESTRAL SPECIES 1 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT01010000229800 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT01030000235208 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00910000147252 Chacoan peccary MODERN SPECIES 950 MRPS25 (ENSCWAG00000018966) #10 RBSN (ENSCWAG00000018943) #11 TRH (ENSCWAG00000018918) #12 TMCC1 (ENSCWAG00000018870) #13 PLXND1 (ENSCWAG00000018660) #14 H1-8 (ENSCWAG00000018609) #15 RHO (ENSCWAG00000018568) #16 IFT122 (ENSCWAG00000018289) #17 ENSCWAG00000018255 ENSCWAG00000018236 #18 ENSCWAG00000018222 #18 EFCAB12 (ENSCWAG00000018153) #19 RPL32 (ENSCWAG00000018094) ##20 CAND2 (ENSCWAG00000018031) #21 TMEM40 (ENSCWAG00000017953) RAF1 (ENSCWAG00000017888) #22 MKRN2 (ENSCWAG00000017797) #24 ENSCWAG00000017774 TSEN2 (ENSCWAG00000017441) #26 PPARG (ENSCWAG00000017057) #28 TIMP4 (ENSCWAG00000017007) #29 SYN2 (ENSCWAG00000016935) #30 TAMM41 (ENSCWAG00000016892) #31 ENSCWAG00000016872 VGLL4 (ENSCWAG00000016758) #32 ATG7 (ENSCWAG00000016602) #33 HRH1 (ENSCWAG00000016580) #35 SLC6A1 (ENSCWAG00000015592) #37 SLC6A11 (ENSCWAG00000015415) ATP2B2 (ENSCWAG00000012003) ENSCWAG00000011861 Pig MODERN SPECIES 4 RBSN (ENSSSCG00000036643) #11 TRH (ENSSSCG00000055507) #12 ENSSSCG00000044894 ENSSSCG00000040441 TMCC1 (ENSSSCG00000011593) #13 PLXND1 (ENSSSCG00000011592) #14 H1-8 (ENSSSCG00000011591) #15 RHO (ENSSSCG00000011590) #16 IFT122 (ENSSSCG00000011589) #17 MBD4 (ENSSSCG00000033303) #18 EFCAB12 (ENSSSCG00000011587) #19 RPL32 (ENSSSCG00000035811) ##20 CAND2 (ENSSSCG00000011582) #21 TMEM40 (ENSSSCG00000011583) ENSSSCG00000056163 RAF1 (ENSSSCG00000024453) #22 MKRN2 (ENSSSCG00000029877) #24 ENSSSCG00000045850 MKRN2OS (ENSSSCG00000011581) #25 TSEN2 (ENSSSCG00000011580) #26 PPARG (ENSSSCG00000011579) #28 TIMP4 (ENSSSCG00000033000) #29 SYN2 (ENSSSCG00000023225) #30 TAMM41 (ENSSSCG00000011578) #31 VGLL4 (ENSSSCG00000030581) #32 ATG7 (ENSSSCG00000011575) #33 HRH1 (ENSSSCG00000011576) #35 SLC6A1 (ENSSSCG00000011577) #37 SLC6A11 (ENSSSCG00000039850) ATP2B2 (ENSSSCG00000023084) SEC13 (ENSSSCG00000011572) Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00950000186178 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT01030000235208 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B Carnivora ANCESTRAL SPECIES 6 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b.d ##20 ENSGT00940000153973.c.a.b.a.b ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00950000186178 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT01030000235208 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000009113.a.a.q.a.a ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 Caniformia ANCESTRAL SPECIES 4 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00950000186178 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT01030000235208 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000009113.a.a.q.a.a ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 Caniformia_b ANCESTRAL SPECIES 16 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00950000186178 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000009113.a.a.q.a.a ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B Mustelinae ANCESTRAL SPECIES 18 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00950000186178 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Ferret MODERN SPECIES 163 NR2C2 (ENSMPUG00000017249) #9 MRPS25 (ENSMPUG00000017248) #10 RBSN (ENSMPUG00000017247) #11 TRH (ENSMPUG00000017246) #12 TMCC1 (ENSMPUG00000017243) #13 ENSMPUG00000017241 PLXND1 (ENSMPUG00000017238) #14 ENSMPUG00000017237 RHO (ENSMPUG00000017225) #16 IFT122 (ENSMPUG00000017197) #17 MBD4 (ENSMPUG00000017195) #18 EFCAB12 (ENSMPUG00000017190) #19 ENSMPUG00000017189 #20 CAND2 (ENSMPUG00000017188) #21 TMEM40 (ENSMPUG00000017187) RAF1 (ENSMPUG00000017185) #22 MKRN2 (ENSMPUG00000017184) #24 MKRN2OS (ENSMPUG00000017183) #25 TSEN2 (ENSMPUG00000017182) #26 PPARG (ENSMPUG00000017181) #28 TIMP4 (ENSMPUG00000017178) #29 SYN2 (ENSMPUG00000017176) #30 TAMM41 (ENSMPUG00000017175) #31 VGLL4 (ENSMPUG00000017174) #32 ATG7 (ENSMPUG00000017171) #33 HRH1 (ENSMPUG00000020115) #35 SLC6A1 (ENSMPUG00000017170) #37 SLC6A11 (ENSMPUG00000017168) ENSMPUG00000017167 ATP2B2 (ENSMPUG00000017163) SEC13 (ENSMPUG00000017161) American mink MODERN SPECIES 287 NR2C2 (ENSNVIG00000009821) #9 MRPS25 (ENSNVIG00000009805) #10 RBSN (ENSNVIG00000009795) #11 TRH (ENSNVIG00000009787) #12 TMCC1 (ENSNVIG00000009775) #13 PLXND1 (ENSNVIG00000009720) #14 H1-8 (ENSNVIG00000009706) #15 RHO (ENSNVIG00000009693) #16 IFT122 (ENSNVIG00000009217) #17 MBD4 (ENSNVIG00000009126) #18 EFCAB12 (ENSNVIG00000009088) #19 ENSNVIG00000009040 ##20 CAND2 (ENSNVIG00000008985) #21 TMEM40 (ENSNVIG00000008852) ENSNVIG00000008812 RAF1 (ENSNVIG00000008700) #22 MKRN2 (ENSNVIG00000008629) #24 MKRN2OS (ENSNVIG00000008607) #25 TSEN2 (ENSNVIG00000008550) #26 PPARG (ENSNVIG00000008444) #28 TIMP4 (ENSNVIG00000008416) #29 ENSNVIG00000008402 SYN2 (ENSNVIG00000008362) #30 Ursidae ANCESTRAL SPECIES 11 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b.d #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00950000186178 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000009113.a.a.q.a.a ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B Ursus ANCESTRAL SPECIES 43 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b.d #16 ENSGT00390000001016.b #17 ENSGT00390000012138.a.a.j.s.b ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b.c.a ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000009113.a.a.q.a.a ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B American black bear DUPLICATION American black bear MODERN SPECIES 4165 ENSUAMG00000022973 #22 MKRN2 (ENSUAMG00000023641) #24 ENSUAMG00000023642 American black bear MODERN SPECIES 4166 ENSUAMG00000023646 #22 Polar bear MODERN SPECIES 210 FGD5 (ENSUMAG00000017065) #8 NR2C2 (ENSUMAG00000017295) #9 MRPS25 (ENSUMAG00000017301) #10 RBSN (ENSUMAG00000017308) #11 TRH (ENSUMAG00000017316) #12 TMCC1 (ENSUMAG00000017322) #13 PLXND1 (ENSUMAG00000017372) #14 RHO (ENSUMAG00000017511) #16 IFT122 (ENSUMAG00000017522) #17 MBD4 (ENSUMAG00000017542) #18 ENSUMAG00000017544 EFCAB12 (ENSUMAG00000017549) #19 RPL32 (ENSUMAG00000017557) ##20 CAND2 (ENSUMAG00000017566) #21 TMEM40 (ENSUMAG00000017596) RAF1 (ENSUMAG00000017600) #22 MKRN2 (ENSUMAG00000017606) #24 MKRN2OS (ENSUMAG00000017608) #25 TSEN2 (ENSUMAG00000017610) #26 PPARG (ENSUMAG00000017617) #28 SYN2 (ENSUMAG00000017656) #30 TIMP4 (ENSUMAG00000017853) #29 TAMM41 (ENSUMAG00000017859) #31 VGLL4 (ENSUMAG00000017868) #32 ATG7 (ENSUMAG00000017892) #33 HRH1 (ENSUMAG00000017957) #35 SLC6A1 (ENSUMAG00000017999) #37 SLC6A11 (ENSUMAG00000018214) ATP2B2 (ENSUMAG00000018280) SEC13 (ENSUMAG00000018614) GHRL (ENSUMAG00000018619) Giant Panda MODERN SPECIES 14 MRPS25 (ENSAMEG00000027927) #10 ENSAMEG00000004361 #11 TRH (ENSAMEG00000025033) #12 TMCC1 (ENSAMEG00000004384) #13 PLXND1 (ENSAMEG00000004387) #14 H1-8 (ENSAMEG00000004448) #15 RHO (ENSAMEG00000004453) #16 IFT122 (ENSAMEG00000004471) #17 ENSAMEG00000030948 MBD4 (ENSAMEG00000004562) #18 ENSAMEG00000004574 #19 RPL32 (ENSAMEG00000004583) ##20 CAND2 (ENSAMEG00000004596) #21 TMEM40 (ENSAMEG00000004646) ENSAMEG00000025362 RAF1 (ENSAMEG00000004650) #22 MKRN2 (ENSAMEG00000004720) #24 MKRN2OS (ENSAMEG00000004745) #25 TSEN2 (ENSAMEG00000004748) #26 PPARG (ENSAMEG00000004774) #28 TIMP4 (ENSAMEG00000004836) #29 SYN2 (ENSAMEG00000004794) #30 TAMM41 (ENSAMEG00000010999) #31 VGLL4 (ENSAMEG00000011011) #32 ATG7 (ENSAMEG00000013130) #33 HRH1 (ENSAMEG00000019211) #35 SLC6A1 (ENSAMEG00000028234) #37 SLC6A11 (ENSAMEG00000013958) ATP2B2 (ENSAMEG00000015866) SEC13 (ENSAMEG00000015994) GHRL (ENSAMEG00000016009) Canidae ANCESTRAL SPECIES ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.a.b ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT01030000235208 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00940000162517.e.b.b ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 Canis_lupus ANCESTRAL SPECIES 1 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00950000183087.A.a.a.b.p.a.a ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.a.b ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00940000162517.e.b.b ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B Dog MODERN SPECIES 12 MRPS25 (ENSCAFG00845026361) #10 ENSCAFG00845026464 #11 TRH (ENSCAFG00845026628) #12 ENSCAFG00845026667 TMCC1 (ENSCAFG00845026698) #13 RPL26 (ENSCAFG00845026761) PLXND1 (ENSCAFG00845026992) #14 H1-8 (ENSCAFG00845027541) #15 RHO (ENSCAFG00845027581) #16 IFT122 (ENSCAFG00845027707) #17 MBD4 (ENSCAFG00845028304) #18 ENSCAFG00845028379 #19 RPL32 (ENSCAFG00845028446) ##20 CAND2 (ENSCAFG00845028524) #21 TMEM40 (ENSCAFG00845028589) RAF1 (ENSCAFG00845028676) #22 ENSCAFG00845028720 MKRN2 (ENSCAFG00845028765) #24 ENSCAFG00845028837 MKRN2OS (ENSCAFG00845028857) #25 TSEN2 (ENSCAFG00845028923) #26 PPARG (ENSCAFG00845029007) #28 SYN2 (ENSCAFG00845029109) #30 TIMP4 (ENSCAFG00845029189) #29 TAMM41 (ENSCAFG00845005937) #31 ENSCAFG00845005976 VGLL4 (ENSCAFG00845006044) #32 ATG7 (ENSCAFG00845006288) #33 HRH1 (ENSCAFG00845006605) #35 SLC6A1 (ENSCAFG00845006668) #37 SLC6A11 (ENSCAFG00845006781) Dingo MODERN SPECIES 236 RBSN (ENSCAFG00020006347) #11 TRH (ENSCAFG00020006350) #12 ENSCAFG00020006352 ENSCAFG00020006358 ENSCAFG00020006362 #13 ENSCAFG00020006372 #13 PLXND1 (ENSCAFG00020006389) #14 H1-8 (ENSCAFG00020006486) #15 RHO (ENSCAFG00020006492) #16 IFT122 (ENSCAFG00020006537) #17 MBD4 (ENSCAFG00020007082) #18 EFCAB12 (ENSCAFG00020007096) #19 RPL32 (ENSCAFG00020007109) ##20 CAND2 (ENSCAFG00020007135) #21 TMEM40 (ENSCAFG00020007225) RAF1 (ENSCAFG00020007230) #22 MKRN2 (ENSCAFG00020007243) #24 ENSCAFG00020007244 MKRN2OS (ENSCAFG00020007247) #25 TSEN2 (ENSCAFG00020007250) #26 PPARG (ENSCAFG00020007261) #28 SYN2 (ENSCAFG00020007281) #30 TIMP4 (ENSCAFG00020007541) #29 TAMM41 (ENSCAFG00020007562) #31 ENSCAFG00020007566 VGLL4 (ENSCAFG00020007573) #32 ATG7 (ENSCAFG00020007592) #33 HRH1 (ENSCAFG00020007622) #35 SLC6A1 (ENSCAFG00020007634) #37 SLC6A11 (ENSCAFG00020007842) ATP2B2 (ENSCAFG00020007890) Red fox MODERN SPECIES 130 NR2C2 (ENSVVUG00000013819) #9 ENSVVUG00000013842 MRPS25 (ENSVVUG00000013846) #10 RBSN (ENSVVUG00000013853) #11 TRH (ENSVVUG00000013865) #12 TMCC1 (ENSVVUG00000013886) #13 PLXND1 (ENSVVUG00000013916) #14 H1-8 (ENSVVUG00000014145) #15 RHO (ENSVVUG00000014149) #16 IFT122 (ENSVVUG00000014184) #17 MBD4 (ENSVVUG00000014222) #18 EFCAB12 (ENSVVUG00000014226) #19 RPL32 (ENSVVUG00000014231) #20 CAND2 (ENSVVUG00000014272) #21 ENSVVUG00000015228 RAF1 (ENSVVUG00000015233) #22 MKRN2 (ENSVVUG00000015240) #24 ENSVVUG00000015242 ENSVVUG00000015244 ENSVVUG00000015247 ENSVVUG00000015251 #25 TSEN2 (ENSVVUG00000015253) #26 PPARG (ENSVVUG00000015266) #28 ENSVVUG00000015270 SYN2 (ENSVVUG00000015294) #30 TIMP4 (ENSVVUG00000015655) #29 ENSVVUG00000015666 TAMM41 (ENSVVUG00000015667) #31 ENSVVUG00000015670 VGLL4 (ENSVVUG00000015675) #32 ATG7 (ENSVVUG00000015693) #33 Felidae ANCESTRAL SPECIES 17 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000009113.a.a.q.a.a ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B Panthera ANCESTRAL SPECIES 1 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000009113.a.a.q.a.a ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B Panthera_a ANCESTRAL SPECIES ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000009113.a.a.q.a.a ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B lion MODERN SPECIES 2 FGD5 (ENSPLOG00000002817) #8 NR2C2 (ENSPLOG00000002757) #9 MRPS25 (ENSPLOG00000002725) #10 RBSN (ENSPLOG00000002563) #11 TRH (ENSPLOG00000002548) #12 TMCC1 (ENSPLOG00000002518) #13 PLXND1 (ENSPLOG00000002460) #14 H1-8 (ENSPLOG00000002423) #15 RHO (ENSPLOG00000002405) #16 IFT122 (ENSPLOG00000002159) #17 MBD4 (ENSPLOG00000002021) #18 EFCAB12 (ENSPLOG00000001903) #19 RPL32 (ENSPLOG00000001870) ##20 CAND2 (ENSPLOG00000001847) #21 TMEM40 (ENSPLOG00000001779) RAF1 (ENSPLOG00000001743) #22 MKRN2 (ENSPLOG00000001691) #24 MKRN2OS (ENSPLOG00000001659) #25 TSEN2 (ENSPLOG00000001594) #26 PPARG (ENSPLOG00000001496) #28 TIMP4 (ENSPLOG00000001454) #29 SYN2 (ENSPLOG00000001422) #30 TAMM41 (ENSPLOG00000001396) #31 VGLL4 (ENSPLOG00000001346) #32 ENSPLOG00000001305 ATG7 (ENSPLOG00000001203) #33 HRH1 (ENSPLOG00000001150) #35 SLC6A1 (ENSPLOG00000001048) #37 SLC6A11 (ENSPLOG00000000895) ATP2B2 (ENSPLOG00000000482) SEC13 (ENSPLOG00000000172) leopard MODERN SPECIES 154 NR2C2 (ENSPPRG00000013873) #9 MRPS25 (ENSPPRG00000013901) #10 RBSN (ENSPPRG00000013941) #11 TRH (ENSPPRG00000013952) #12 TMCC1 (ENSPPRG00000014113) #13 PLXND1 (ENSPPRG00000014283) #14 H1-8 (ENSPPRG00000014444) #15 RHO (ENSPPRG00000014471) #16 ENSPPRG00000014504 IFT122 (ENSPPRG00000015865) #17 MBD4 (ENSPPRG00000016480) #18 EFCAB12 (ENSPPRG00000016816) #19 RPL32 (ENSPPRG00000016964) ##20 CAND2 (ENSPPRG00000017246) #21 TMEM40 (ENSPPRG00000018566) RAF1 (ENSPPRG00000021390) #22 MKRN2 (ENSPPRG00000021887) #24 MKRN2OS (ENSPPRG00000021987) #25 Tiger MODERN SPECIES 57 ENSPTIG00000016501 #13 ENSPTIG00000016640 H1-8 (ENSPTIG00000016687) #15 RHO (ENSPTIG00000016846) #16 IFT122 (ENSPTIG00000017825) #17 ENSPTIG00000012068 #18 EFCAB12 (ENSPTIG00000012496) #19 RPL32 (ENSPTIG00000013290) ##20 CAND2 (ENSPTIG00000014551) #21 TMEM40 (ENSPTIG00000016867) RAF1 (ENSPTIG00000019431) #22 MKRN2 (ENSPTIG00000020261) #24 MKRN2OS (ENSPTIG00000020689) #25 TSEN2 (ENSPTIG00000021018) #26 PPARG (ENSPTIG00000021339) #28 SYN2 (ENSPTIG00000005386) #30 TIMP4 (ENSPTIG00000009274) #29 TAMM41 (ENSPTIG00000009439) #31 VGLL4 (ENSPTIG00000011766) #32 ATG7 (ENSPTIG00000012782) #33 HRH1 (ENSPTIG00000005327) #35 SLC6A1 (ENSPTIG00000015454) #37 SLC6A11 (ENSPTIG00000016056) ATP2B2 (ENSPTIG00000016845) SEC13 (ENSPTIG00000019088) GHRL (ENSPTIG00000020903) Cat MODERN SPECIES 1 NR2C2 (ENSFCAG00000003537) #9 MRPS25 (ENSFCAG00000027687) #10 RBSN (ENSFCAG00000025901) #11 TRH (ENSFCAG00000029423) #12 TMCC1 (ENSFCAG00000027586) #13 PLXND1 (ENSFCAG00000000095) #14 H1-8 (ENSFCAG00000000094) #15 RHO (ENSFCAG00000000092) #16 IFT122 (ENSFCAG00000000086) #17 MBD4 (ENSFCAG00000000083) #18 EFCAB12 (ENSFCAG00000000081) #19 RPL32 (ENSFCAG00000030450) ##20 CAND2 (ENSFCAG00000008340) #21 ENSFCAG00000052196 TMEM40 (ENSFCAG00000037003) RAF1 (ENSFCAG00000026299) #22 MKRN2 (ENSFCAG00000007979) #24 ENSFCAG00000049119 MKRN2OS (ENSFCAG00000046813) #25 TSEN2 (ENSFCAG00000025500) #26 PPARG (ENSFCAG00000006231) #28 TIMP4 (ENSFCAG00000028966) #29 SYN2 (ENSFCAG00000006229) #30 TAMM41 (ENSFCAG00000030835) #31 VGLL4 (ENSFCAG00000003266) #32 ATG7 (ENSFCAG00000003263) #33 HRH1 (ENSFCAG00000034897) #35 SLC6A1 (ENSFCAG00000004345) #37 SLC6A11 (ENSFCAG00000006043) ATP2B2 (ENSFCAG00000011247) SEC13 (ENSFCAG00000011245) Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b.d ##20 ENSGT00940000153973.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00950000186178 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Chiroptera ANCESTRAL SPECIES 54 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Microchiroptera ANCESTRAL SPECIES 16 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Microbat MODERN SPECIES 945 FGD5 (ENSMLUG00000010008) #8 NR2C2 (ENSMLUG00000010062) #9 ENSMLUG00000017504 #10 RBSN (ENSMLUG00000010088) #11 TRH (ENSMLUG00000007249) #12 TMCC1 (ENSMLUG00000016755) #13 PLXND1 (ENSMLUG00000014790) #14 ENSMLUG00000025226 #15 RHO (ENSMLUG00000014786) #16 IFT122 (ENSMLUG00000014771) #17 MBD4 (ENSMLUG00000014766) #18 ENSMLUG00000014759 #19 RPL32 (ENSMLUG00000022528) ##20 CAND2 (ENSMLUG00000006333) #21 TMEM40 (ENSMLUG00000002835) RAF1 (ENSMLUG00000017645) #22 MKRN2 (ENSMLUG00000017643) #24 MKRN2OS (ENSMLUG00000024734) #25 TSEN2 (ENSMLUG00000017641) #26 PPARG (ENSMLUG00000017638) #28 SYN2 (ENSMLUG00000006253) #30 TIMP4 (ENSMLUG00000006263) #29 TAMM41 (ENSMLUG00000015063) #31 VGLL4 (ENSMLUG00000010597) #32 ATG7 (ENSMLUG00000010572) #33 HRH1 (ENSMLUG00000010552) #35 SLC6A1 (ENSMLUG00000002027) #37 ENSMLUG00000009590 ATP2B2 (ENSMLUG00000001467) SEC13 (ENSMLUG00000004901) GHRL (ENSMLUG00000012014) Greater horseshoe bat MODERN SPECIES 8 NR2C2 (ENSRFEG00010017049) #9 ENSRFEG00010017258 MRPS25 (ENSRFEG00010017280) #10 RBSN (ENSRFEG00010017337) #11 TRH (ENSRFEG00010017403) #12 ENSRFEG00010017442 TMCC1 (ENSRFEG00010017473) #13 PLXND1 (ENSRFEG00010017592) #14 RHO (ENSRFEG00010017659) #16 IFT122 (ENSRFEG00010017745) #17 MBD4 (ENSRFEG00010018007) #18 EFCAB12 (ENSRFEG00010018070) #19 RPL32 (ENSRFEG00010018162) ##20 CAND2 (ENSRFEG00010018212) #21 TMEM40 (ENSRFEG00010018278) RAF1 (ENSRFEG00010018423) #22 MKRN2 (ENSRFEG00010018469) #24 MKRN2OS (ENSRFEG00010018565) #25 TSEN2 (ENSRFEG00010018592) #26 PPARG (ENSRFEG00010018692) #28 SYN2 (ENSRFEG00010018840) #30 TIMP4 (ENSRFEG00010018875) #29 TAMM41 (ENSRFEG00010018912) #31 VGLL4 (ENSRFEG00010019005) #32 ATG7 (ENSRFEG00010019096) #33 HRH1 (ENSRFEG00010019159) #35 SLC6A1 (ENSRFEG00010019187) #37 SLC6A11 (ENSRFEG00010019331) ATP2B2 (ENSRFEG00010019414) ENSRFEG00010010425 ENSRFEG00010010629 Megabat MODERN SPECIES 1499 CAND2 (ENSPVAG00000005826) #21 TMEM40 (ENSPVAG00000005825) RAF1 (ENSPVAG00000005823) #22 MKRN2 (ENSPVAG00000005822) #24 TSEN2 (ENSPVAG00000005820) #26 Equus DUPLICATION Equus ANCESTRAL SPECIES ENSGT00940000156084.`b #22 Horse MODERN SPECIES RPS24 (ENSECAG00000016939) ZMIZ1 (ENSECAG00000021528) ZCCHC24 (ENSECAG00000017763) PPIF (ENSECAG00000008796) ANXA11 (ENSECAG00000019671) ENSECAG00000045443 TMEM254 (ENSECAG00000013627) AGT (ENSECAG00000015711) COG2 (ENSECAG00000010075) ENSECAG00000050926 ENSECAG00000027790 PGBD5 (ENSECAG00000006175) GALNT2 (ENSECAG00000008653) ENSECAG00000035867 ENSECAG00000045954 ENSECAG00000033308 #22 URB2 (ENSECAG00000012338) TAF5L (ENSECAG00000016369) ABCB10 (ENSECAG00000017883) NUP133 (ENSECAG00000020760) ACTA1 (ENSECAG00000000207) CCSAP (ENSECAG00000005178) RAB4A (ENSECAG00000005207) RHOU (ENSECAG00000007462) ZNF22 (ENSECAG00000003034) RASSF4 (ENSECAG00000007066) DEPP1 (ENSECAG00000046594) ENSECAG00000045917 TMEM72 (ENSECAG00000016463) CXCL12 (ENSECAG00000019551) ZNF32 (ENSECAG00000023676) Equus DUPLICATION Equus DUPLICATION Equus ANCESTRAL SPECIES ENSGT00940000156084.ab.a.a #22 Donkey DUPLICATION Donkey MODERN SPECIES 11 ENSEASG00005022991 SAMD8 (ENSEASG00005022992) VDAC2 (ENSEASG00005022993) COMTD1 (ENSEASG00005022994) ZNF503 (ENSEASG00005022995) ENSEASG00005022998 ENSEASG00005028521 ENSEASG00005025433 ENSEASG00005012078 COG2 (ENSEASG00005012075) ENSEASG00005012074 PGBD5 (ENSEASG00005012072) ENSEASG00005012066 ENSEASG00005012068 ENSEASG00005034731 #22 ENSEASG00005012065 #22 ENSEASG00005012060 TAF5L (ENSEASG00005012053) ABCB10 (ENSEASG00005011975) NUP133 (ENSEASG00005010841) ACTA1 (ENSEASG00005031337) CCSAP (ENSEASG00005010775) RAB4A (ENSEASG00005010764) ENSEASG00005026208 ENSEASG00005025602 RASSF4 (ENSEASG00005006918) DEPP1 (ENSEASG00005006924) TMEM72 (ENSEASG00005033345) CXCL12 (ENSEASG00005031864) ZNF32 (ENSEASG00005030797) ENSEASG00005028506 Donkey MODERN SPECIES 11 DUSP13 (ENSEASG00005035904) ENSEASG00005022991 SAMD8 (ENSEASG00005022992) VDAC2 (ENSEASG00005022993) COMTD1 (ENSEASG00005022994) ZNF503 (ENSEASG00005022995) ENSEASG00005022998 ENSEASG00005028521 ENSEASG00005025433 ENSEASG00005012078 COG2 (ENSEASG00005012075) ENSEASG00005012074 PGBD5 (ENSEASG00005012072) ENSEASG00005012066 ENSEASG00005012068 ENSEASG00005034731 #22 ENSEASG00005012065 #22 ENSEASG00005012060 TAF5L (ENSEASG00005012053) ABCB10 (ENSEASG00005011975) NUP133 (ENSEASG00005010841) ACTA1 (ENSEASG00005031337) CCSAP (ENSEASG00005010775) RAB4A (ENSEASG00005010764) ENSEASG00005026208 ENSEASG00005025602 RASSF4 (ENSEASG00005006918) DEPP1 (ENSEASG00005006924) TMEM72 (ENSEASG00005033345) CXCL12 (ENSEASG00005031864) ZNF32 (ENSEASG00005030797) Equus ANCESTRAL SPECIES 5 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00940000153973.d ##20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00950000186178 ENSGT00940000156084.ab.a.b #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT01030000235208 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B Horse MODERN SPECIES 7 FGD5 (ENSECAG00000016458) #8 NR2C2 (ENSECAG00000003791) #9 MRPS25 (ENSECAG00000020841) #10 RBSN (ENSECAG00000021486) #11 TRH (ENSECAG00000006178) #12 TMCC1 (ENSECAG00000006725) #13 PLXND1 (ENSECAG00000009159) #14 H1-8 (ENSECAG00000013614) #15 RHO (ENSECAG00000013709) #16 IFT122 (ENSECAG00000015360) #17 MBD4 (ENSECAG00000022106) #18 CAND2 (ENSECAG00000010515) #21 RPL32 (ENSECAG00000049946) ##20 TMEM40 (ENSECAG00000008940) ENSECAG00000033555 RAF1 (ENSECAG00000011807) #22 MKRN2 (ENSECAG00000024404) #24 MKRN2OS (ENSECAG00000012416) TSEN2 (ENSECAG00000012813) #26 ENSECAG00000039510 PPARG (ENSECAG00000016664) #28 SYN2 (ENSECAG00000049642) #30 TIMP4 (ENSECAG00000011609) #29 TAMM41 (ENSECAG00000013860) #31 VGLL4 (ENSECAG00000039947) #32 ATG7 (ENSECAG00000022756) #33 ENSECAG00000048096 ENSECAG00000057850 HRH1 (ENSECAG00000004544) #35 SLC6A1 (ENSECAG00000000699) #37 SLC6A11 (ENSECAG00000004220) Donkey MODERN SPECIES 13 ENSEASG00005015425 NR2C2 (ENSEASG00005015422) #9 ENSEASG00005015419 #10 ENSEASG00005015384 #11 ENSEASG00005015376 #12 TMCC1 (ENSEASG00005015373) #13 PLXND1 (ENSEASG00005015351) #14 H1-8 (ENSEASG00005025925) #15 RHO (ENSEASG00005015347) #16 IFT122 (ENSEASG00005014840) #17 MBD4 (ENSEASG00005014800) #18 ENSEASG00005014792 ##20 CAND2 (ENSEASG00005014788) #21 ENSEASG00005025405 TMEM40 (ENSEASG00005033260) ENSEASG00005014777 #22 MKRN2 (ENSEASG00005014776) #24 MKRN2OS (ENSEASG00005035083) #25 ENSEASG00005014772 TSEN2 (ENSEASG00005014763) #26 PPARG (ENSEASG00005014732) #28 TIMP4 (ENSEASG00005030754) #29 SYN2 (ENSEASG00005014311) #30 TAMM41 (ENSEASG00005014302) #31 VGLL4 (ENSEASG00005014301) #32 ENSEASG00005027051 ATG7 (ENSEASG00005014298) #33 HRH1 (ENSEASG00005025266) #35 SLC6A1 (ENSEASG00005014296) #37 SLC6A11 (ENSEASG00005014295) ENSEASG00005034257 Equus ANCESTRAL SPECIES ENSGT00940000156084.ab.b #22 Donkey MODERN SPECIES 13 NKIRAS1 (ENSEASG00005026235) ENSEASG00005027441 NR1D2 (ENSEASG00005005978) THRB (ENSEASG00005005979) RARB (ENSEASG00005005983) TOP2B (ENSEASG00005005985) NGLY1 (ENSEASG00005005991) OXSM (ENSEASG00005005992) LRRC3B (ENSEASG00005024092) NEK10 (ENSEASG00005006003) SLC4A7 (ENSEASG00005006058) EOMES (ENSEASG00005006127) CMC1 (ENSEASG00005030717) AZI2 (ENSEASG00005006140) ENSEASG00005006144 ENSEASG00005033576 #22 TGFBR2 (ENSEASG00005006161) GADL1 (ENSEASG00005006169) ENSEASG00005033041 STT3B (ENSEASG00005006174) OSBPL10 (ENSEASG00005006177) GPD1L (ENSEASG00005006178) CMTM8 (ENSEASG00005006179) CMTM7 (ENSEASG00005034930) CMTM6 (ENSEASG00005034157) DYNC1LI1 (ENSEASG00005006183) CNOT10 (ENSEASG00005006189) TRIM71 (ENSEASG00005006192) CCR4 (ENSEASG00005031493) GLB1 (ENSEASG00005006196) TMPPE (ENSEASG00005031717) Atlantogenata ANCESTRAL SPECIES 34 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.b.b ##20 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 Xenarthra ANCESTRAL SPECIES 662 ENSGT00390000017740.a.b #21 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 Sloth MODERN SPECIES 2491 RAF1 (ENSCHOG00000001052) #22 Armadillo MODERN SPECIES 1334 CAND2 (ENSDNOG00000040049) #21 RAF1 (ENSDNOG00000009252) #22 ENSDNOG00000017476 #24 MKRN2OS (ENSDNOG00000042709) #25 TSEN2 (ENSDNOG00000038504) #26 PPARG (ENSDNOG00000018641) #28 TIMP4 (ENSDNOG00000012868) #29 SYN2 (ENSDNOG00000012852) #30 Afrotheria ANCESTRAL SPECIES 32 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 ENSGT00940000155616 ENSGT00940000159835 ENSGT00390000014353 Afrotheria_a ANCESTRAL SPECIES 32 ENSGT00940000157922 #8 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a #18 ENSGT00390000014874 #19 ENSGT00940000153973.c.a.a #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B ENSGT00390000004064 ENSGT00940000155616 Elephant MODERN SPECIES 49 C3orf20 (ENSLAFG00000015670) #7 FGD5 (ENSLAFG00000010491) #8 NR2C2 (ENSLAFG00000010224) #9 MRPS25 (ENSLAFG00000022178) #10 RBSN (ENSLAFG00000004227) #11 TRH (ENSLAFG00000015165) #12 TMCC1 (ENSLAFG00000013730) #13 PLXND1 (ENSLAFG00000003012) #14 RHO (ENSLAFG00000001359) #16 IFT122 (ENSLAFG00000010612) #17 MBD4 (ENSLAFG00000010609) #18 EFCAB12 (ENSLAFG00000010605) #19 ENSLAFG00000032737 #20 CAND2 (ENSLAFG00000017706) #21 TMEM40 (ENSLAFG00000010230) RAF1 (ENSLAFG00000011608) #22 MKRN2 (ENSLAFG00000011601) #24 TSEN2 (ENSLAFG00000009300) #26 PPARG (ENSLAFG00000030870) #28 SYN2 (ENSLAFG00000004657) #30 TIMP4 (ENSLAFG00000004660) #29 TAMM41 (ENSLAFG00000011239) #31 VGLL4 (ENSLAFG00000017133) #32 ATG7 (ENSLAFG00000017130) #33 HRH1 (ENSLAFG00000017128) #35 SLC6A1 (ENSLAFG00000022374) #37 SLC6A11 (ENSLAFG00000016494) ATP2B2 (ENSLAFG00000014604) SEC13 (ENSLAFG00000014598) GHRL (ENSLAFG00000014068) TATDN2 (ENSLAFG00000028812) Hyrax MODERN SPECIES 10043 RAF1 (ENSPCAG00000016080) #22 MKRN2 (ENSPCAG00000016175) #24 Tenrec MODERN SPECIES 7278 RAF1 (ENSETEG00000003974) #22 MKRN2 (ENSETEG00000003970) #24 Marsupialia ANCESTRAL SPECIES 14 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a.b #18 ENSGT00530000063687.a.a #18 ENSGT00390000014874 #19 ENSGT00940000153973 #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000154650.d.g.b.a.a.a.b ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B Marsupialia_b ANCESTRAL SPECIES 14 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT00940000160900 #15 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a.b #18 ENSGT00530000063687.a.a #18 ENSGT00390000014874 #19 ENSGT00940000153973 #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000154650.d.g.b.a.a.a.b ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B Diprotodontia ANCESTRAL SPECIES 12 ENSGT00510000050664 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a.b #18 ENSGT00530000063687.a.a #18 ENSGT00390000014874 #19 ENSGT00940000153973 #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000154650.d.g.b.a.a.a.b ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B Diprotodontia_a ANCESTRAL SPECIES 10 ENSGT00510000050664 ENSGT00940000158393 #9 ENSGT00640000091558 #10 ENSGT00390000007159 #11 ENSGT00390000016951 #12 ENSGT00940000155189 #13 ENSGT01020000230394.e.b.a #14 ENSGT01030000234549.a.a.a.a.a.b.b #16 ENSGT00390000001016.b #17 ENSGT00530000063687.a.b #18 ENSGT00530000063687.a.a #18 ENSGT00390000014874 #19 ENSGT00940000153973 #20 ENSGT00390000017740.a.b #21 ENSGT00390000017530 ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000154650.d.g.b.a.a.a.b ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00940000153393.B Common wonbat MODERN SPECIES 1012 CCDC174 (ENSVURG00010014898) FGD5 (ENSVURG00010014863) #8 ENSVURG00010014858 NR2C2 (ENSVURG00010014575) #9 MRPS25 (ENSVURG00010014548) #10 RBSN (ENSVURG00010014533) #11 TMCC1 (ENSVURG00010014518) #13 PLXND1 (ENSVURG00010014456) #14 RHO (ENSVURG00010014434) #16 IFT122 (ENSVURG00010014263) #17 ENSVURG00010014225 #18 ENSVURG00010014212 #19 ENSVURG00010014192 #20 CAND2 (ENSVURG00010013279) #21 TMEM40 (ENSVURG00010013215) RAF1 (ENSVURG00010013196) #22 MKRN2 (ENSVURG00010013169) #24 MKRN2OS (ENSVURG00010013158) #25 TSEN2 (ENSVURG00010013138) #26 PPARG (ENSVURG00010013093) #28 ENSVURG00010013080 #30 TIMP4 (ENSVURG00010013076) #29 ENSVURG00010013071 #30 TAMM41 (ENSVURG00010013046) #31 VGLL4 (ENSVURG00010013026) #32 ATG7 (ENSVURG00010012989) #33 HRH1 (ENSVURG00010012968) #35 SLC6A1 (ENSVURG00010011767) #37 ENSVURG00010011722 SLC6A11 (ENSVURG00010011698) ENSVURG00010011601 koala MODERN SPECIES 10 FGD5 (ENSPCIG00000023533) #8 NR2C2 (ENSPCIG00000023531) #9 ENSPCIG00000023530 #10 RBSN (ENSPCIG00000023528) #11 ENSPCIG00000023527 #12 TMCC1 (ENSPCIG00000002496) #13 PLXND1 (ENSPCIG00000002459) #14 RHO (ENSPCIG00000002359) #16 IFT122 (ENSPCIG00000002304) #17 ENSPCIG00000035263 #18 ENSPCIG00000002276 #18 ENSPCIG00000002263 #19 RPL32 (ENSPCIG00000036095) #20 CAND2 (ENSPCIG00000002229) #21 TMEM40 (ENSPCIG00000002215) RAF1 (ENSPCIG00000009694) #22 MKRN2 (ENSPCIG00000031653) #24 MKRN2OS (ENSPCIG00000002201) #25 TSEN2 (ENSPCIG00000002191) #26 PPARG (ENSPCIG00000002060) #28 TIMP4 (ENSPCIG00000002040) #29 SYN2 (ENSPCIG00000002007) #30 TAMM41 (ENSPCIG00000036857) #31 VGLL4 (ENSPCIG00000011097) #32 ATG7 (ENSPCIG00000011062) #33 ENSPCIG00000011056 HRH1 (ENSPCIG00000011053) #35 SLC6A1 (ENSPCIG00000011049) #37 SLC6A11 (ENSPCIG00000011028) ATP2B2 (ENSPCIG00000024350) ENSPCIG00000021918 Wallaby MODERN SPECIES 9824 RAF1 (ENSMEUG00000004360) #22 MKRN2 (ENSMEUG00000004347) #24 Tasmanian devil MODERN SPECIES FGD5 (ENSSHAG00000016383) #8 ENSSHAG00000024996 NR2C2 (ENSSHAG00000016078) #9 ENSSHAG00000015988 #11 ENSSHAG00000026312 #12 TMCC1 (ENSSHAG00000014733) #13 PLXND1 (ENSSHAG00000013651) #14 ENSSHAG00000029482 #15 RHO (ENSSHAG00000013534) #16 IFT122 (ENSSHAG00000013078) #17 MBD4 (ENSSHAG00000012953) #18 ENSSHAG00000012822 #19 ENSSHAG00000012782 #20 CAND2 (ENSSHAG00000012567) #21 TMEM40 (ENSSHAG00000012194) RAF1 (ENSSHAG00000011099) #22 ENSSHAG00000011021 #24 MKRN2OS (ENSSHAG00000010787) #25 TSEN2 (ENSSHAG00000010530) #26 PPARG (ENSSHAG00000008610) #28 TIMP4 (ENSSHAG00000006738) #29 SYN2 (ENSSHAG00000006422) #30 TAMM41 (ENSSHAG00000018802) #31 ENSSHAG00000018702 #32 ENSSHAG00000027506 ENSSHAG00000031478 ATG7 (ENSSHAG00000022602) #33 HRH1 (ENSSHAG00000028397) #35 ENSSHAG00000018140 #37 SLC6A11 (ENSSHAG00000026964) ENSSHAG00000017272 Opossum MODERN SPECIES 5 RBSN (ENSMODG00000007011) #11 ENSMODG00000028708 #12 ENSMODG00000042057 ENSMODG00000044035 TMCC1 (ENSMODG00000006987) #13 PLXND1 (ENSMODG00000006963) #14 ENSMODG00000028422 #15 RHO (ENSMODG00000006488) #16 IFT122 (ENSMODG00000006462) #17 ENSMODG00000042737 #18 ENSMODG00000006399 #18 ENSMODG00000006335 #19 RPL32 (ENSMODG00000037211) #20 CAND2 (ENSMODG00000006377) #21 ENSMODG00000025518 RAF1 (ENSMODG00000006307) #22 MKRN2 (ENSMODG00000006280) #24 MKRN2OS (ENSMODG00000006265) #25 TSEN2 (ENSMODG00000006249) #26 PPARG (ENSMODG00000006233) #28 TIMP4 (ENSMODG00000006199) #29 SYN2 (ENSMODG00000006159) #30 ENSMODG00000006153 #31 VGLL4 (ENSMODG00000006145) #32 ATG7 (ENSMODG00000006136) #33 ENSMODG00000006043 HRH1 (ENSMODG00000006000) #35 SLC6A1 (ENSMODG00000005984) #37 SLC6A11 (ENSMODG00000005602) ATP2B2 (ENSMODG00000005537) SEC13 (ENSMODG00000005505) Platypus MODERN SPECIES 83 ENSOANG00000043679 ENSOANG00000036327 MKNK2 (ENSOANG00000048798) MOB3A (ENSOANG00000040976) ENSOANG00000050388 DOT1L (ENSOANG00000010015) ENSOANG00000036300 OAZ1 (ENSOANG00000000654) ENSOANG00000030064 LINGO3 (ENSOANG00000003705) SEMA3G (ENSOANG00000013236) SYN2 (ENSOANG00000020050) #30 PPARG (ENSOANG00000046286) #28 ISY1 (ENSOANG00000013141) ENSOANG00000045625 RAF1 (ENSOANG00000005684) #22 MKRN2 (ENSOANG00000038817) #24 MKRN2OS (ENSOANG00000039177) #25 ENSOANG00000011648 #26 CIAO2B (ENSOANG00000045690) RRAD (ENSOANG00000013935) ENSOANG00000042386 PDP2 (ENSOANG00000015274) CA7 (ENSOANG00000012209) ENSOANG00000031931 ENSOANG00000029079 ENSOANG00000030783 ENSOANG00000032301 ENSOANG00000030932 NAE1 (ENSOANG00000001061) Sauria ANCESTRAL SPECIES 13 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00620000089227 Archelosauria ANCESTRAL SPECIES 17 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00620000089227 Archosauria ANCESTRAL SPECIES 24 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00620000089227 Aves ANCESTRAL SPECIES 29 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00620000089227 Neognathae ANCESTRAL SPECIES 27 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00620000089227 Galloanserae ANCESTRAL SPECIES 26 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00620000089227 Anatidae ANCESTRAL SPECIES 54 ENSGT00960000189495 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT01030000235208 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00390000004860 Pink-footed goose MODERN SPECIES 110 PTPDC1 (ENSABRG00000007379) ENSABRG00000007383 WNT7A (ENSABRG00000007393) FBLN2 (ENSABRG00000007418) HDAC11 (ENSABRG00000007799) NUP210 (ENSABRG00000007910) IQSEC1 (ENSABRG00000008262) ACAD9 (ENSABRG00000008890) CFAP92 (ENSABRG00000009441) EFCC1 (ENSABRG00000009460) GP9 (ENSABRG00000009470) RAB43 (ENSABRG00000009489) ENSABRG00000009510 ISY1 (ENSABRG00000009673) ENSABRG00000009679 RAF1 (ENSABRG00000009695) #22 MKRN2 (ENSABRG00000009708) #24 ENSABRG00000009722 TSEN2 (ENSABRG00000009724) #26 PPARG (ENSABRG00000009733) #28 SYN2 (ENSABRG00000009741) #30 TIMP4 (ENSABRG00000009748) #29 TAMM41 (ENSABRG00000009773) #31 VGLL4 (ENSABRG00000009786) #32 ATG7 (ENSABRG00000009797) #33 HRH1 (ENSABRG00000009830) #35 Duck MODERN SPECIES 4 PHF2 (ENSAPLG00000013367) PTPDC1 (ENSAPLG00000013824) ENSAPLG00000026214 WNT7A (ENSAPLG00000013876) FBLN2 (ENSAPLG00000014027) HDAC11 (ENSAPLG00000012032) NUP210 (ENSAPLG00000012355) IQSEC1 (ENSAPLG00000013323) ACAD9 (ENSAPLG00000013493) ENSAPLG00000013916 ENSAPLG00000013971 GP9 (ENSAPLG00000001853) RAB43 (ENSAPLG00000026304) ISY1 (ENSAPLG00000014136) ENSAPLG00000014227 RAF1 (ENSAPLG00000014376) #22 MKRN2 (ENSAPLG00000014833) #24 ENSAPLG00000017751 ENSAPLG00000014992 #26 PPARG (ENSAPLG00000009031) #28 SYN2 (ENSAPLG00000009144) #30 TIMP4 (ENSAPLG00000027938) #29 ENSAPLG00000028592 TAMM41 (ENSAPLG00000009828) #31 VGLL4 (ENSAPLG00000010053) #32 ATG7 (ENSAPLG00000010216) #33 HRH1 (ENSAPLG00000011710) #35 ENSAPLG00000024336 SLC6A1 (ENSAPLG00000010815) #37 SLC6A11 (ENSAPLG00000006803) ATP2B2 (ENSAPLG00000006083) Phasianidae ANCESTRAL SPECIES 16 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00620000089227 Phasianidae_b ANCESTRAL SPECIES 16 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00620000089227 Chicken MODERN SPECIES 3 BARX1 (ENSGALG00010027671) PTPDC1 (ENSGALG00010027667) WNT7A (ENSGALG00010027653) FBLN2 (ENSGALG00010027649) HDAC11 (ENSGALG00010027988) NUP210 (ENSGALG00010027980) IQSEC1 (ENSGALG00010027975) ACAD9 (ENSGALG00010027965) CFAP92 (ENSGALG00010027954) ENSGALG00010027958 GP9 (ENSGALG00010027947) RAB43 (ENSGALG00010027943) ENSGALG00010027938 ISY1 (ENSGALG00010027935) CNBP (ENSGALG00010027934) RAF1 (ENSGALG00010027930) #22 MKRN2 (ENSGALG00010027925) #24 MKRN2OS (ENSGALG00010027921) #25 TSEN2 (ENSGALG00010027919) #26 PPARG (ENSGALG00010027917) #28 TIMP4 (ENSGALG00010027909) #29 SYN2 (ENSGALG00010027905) #30 TAMM41 (ENSGALG00010027263) #31 VGLL4 (ENSGALG00010027253) #32 ATG7 (ENSGALG00010027247) #33 HRH1 (ENSGALG00010027243) #35 SLC6A1 (ENSGALG00010027240) #37 SLC6A11 (ENSGALG00010027234) ATP2B2 (ENSGALG00010027231) IARS1 (ENSGALG00010027218) ENSGALG00010028201 Turkey MODERN SPECIES 5 FAM120A (ENSMGAG00000005522) PHF2 (ENSMGAG00000005454) PTPDC1 (ENSMGAG00000005445) WNT7A (ENSMGAG00000005423) FBLN2 (ENSMGAG00000005381) HDAC11 (ENSMGAG00000005351) NUP210 (ENSMGAG00000005324) IQSEC1 (ENSMGAG00000005294) ACAD9 (ENSMGAG00000005216) ENSMGAG00000005211 GP9 (ENSMGAG00000015506) ENSMGAG00000005141 ENSMGAG00000005131 ISY1 (ENSMGAG00000005181) ENSMGAG00000005152 RAF1 (ENSMGAG00000005082) #22 MKRN2 (ENSMGAG00000005057) #24 TSEN2 (ENSMGAG00000005015) #26 PPARG (ENSMGAG00000004981) #28 TIMP4 (ENSMGAG00000004964) #29 SYN2 (ENSMGAG00000004944) #30 ENSMGAG00000021149 TAMM41 (ENSMGAG00000004937) #31 VGLL4 (ENSMGAG00000004921) #32 ENSMGAG00000019207 ATG7 (ENSMGAG00000004873) #33 HRH1 (ENSMGAG00000004868) #35 SLC6A1 (ENSMGAG00000004819) #37 SLC6A11 (ENSMGAG00000004717) ENSMGAG00000004661 IARS1 (ENSMGAG00000004555) Japanese quail MODERN SPECIES 3 BARX1 (ENSCJPG00005012892) PTPDC1 (ENSCJPG00005012891) WNT7A (ENSCJPG00005012887) FBLN2 (ENSCJPG00005012884) HDAC11 (ENSCJPG00005012883) NUP210 (ENSCJPG00005012882) IQSEC1 (ENSCJPG00005012881) ACAD9 (ENSCJPG00005012880) ENSCJPG00005012879 ENSCJPG00005012878 GP9 (ENSCJPG00005012877) RAB43 (ENSCJPG00005012876) ENSCJPG00005012875 ISY1 (ENSCJPG00005012874) ENSCJPG00005012873 RAF1 (ENSCJPG00005012872) #22 MKRN2OS (ENSCJPG00005012871) #25 MKRN2 (ENSCJPG00005012870) #24 TSEN2 (ENSCJPG00005012869) #26 PPARG (ENSCJPG00005012868) #28 TIMP4 (ENSCJPG00005012867) #29 SYN2 (ENSCJPG00005012866) #30 TAMM41 (ENSCJPG00005012865) #31 VGLL4 (ENSCJPG00005012862) #32 ATG7 (ENSCJPG00005012861) #33 HRH1 (ENSCJPG00005012860) #35 SLC6A1 (ENSCJPG00005012319) #37 SLC6A11 (ENSCJPG00005012307) ENSCJPG00005012303 IARS1 (ENSCJPG00005012250) ENSCJPG00005012248 Neognathae_b ANCESTRAL SPECIES 18 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00620000089227 Passeriformes ANCESTRAL SPECIES 16 ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00950000182865.b.b.b.c.a Passeriformes_d ANCESTRAL SPECIES 16 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980.f ENSGT00940000164112.a ENSGT00390000014109.d.b.a ENSGT00950000183041.A ENSGT00390000014300.p ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00950000182865.b.b.b.c.a Flycatcher MODERN SPECIES 3 ENSFALG00000014165 WNT7A (ENSFALG00000024842) ENSFALG00000026079 FBLN2 (ENSFALG00000009172) ENSFALG00000026076 HDAC11 (ENSFALG00000023220) NUP210 (ENSFALG00000000036) IQSEC1 (ENSFALG00000000034) ENSFALG00000000031 ENSFALG00000000026 ENSFALG00000028736 ENSFALG00000000024 ENSFALG00000000023 ENSFALG00000025948 ENSFALG00000014288 RAF1 (ENSFALG00000000018) #22 MKRN2 (ENSFALG00000000015) #24 TSEN2 (ENSFALG00000000012) #26 PPARG (ENSFALG00000028484) #28 SYN2 (ENSFALG00000000009) #30 TIMP4 (ENSFALG00000023921) #29 TAMM41 (ENSFALG00000000008) #31 VGLL4 (ENSFALG00000000007) #32 ATG7 (ENSFALG00000000006) #33 HRH1 (ENSFALG00000014152) #35 SLC6A1 (ENSFALG00000000005) #37 SLC6A11 (ENSFALG00000000004) ENSFALG00000028800 ENSFALG00000000003 IARS1 (ENSFALG00000010261) ENSFALG00000023030 Passeriformes_g ANCESTRAL SPECIES 16 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980.f ENSGT00940000164112.a ENSGT00390000014109.d.b.a ENSGT00950000183041.A ENSGT00390000014300.p ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00950000182865.b.b.b.c.a Passeroidea ANCESTRAL SPECIES 16 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980.f ENSGT00940000164112.a ENSGT00390000014109.d.b.a ENSGT00950000183041.A ENSGT00390000014300.p ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00950000182865.b.b.b.c.a Zebra finch MODERN SPECIES 3 BARX1 (ENSTGUG00000003728) PTPDC1 (ENSTGUG00000003741) WNT7A (ENSTGUG00000003752) ENSTGUG00000022371 FBLN2 (ENSTGUG00000003758) ENSTGUG00000003803 ENSTGUG00000003823 IQSEC1 (ENSTGUG00000003876) ACAD9 (ENSTGUG00000003909) ENSTGUG00000023307 GP9 (ENSTGUG00000003978) RAB43 (ENSTGUG00000021700) ENSTGUG00000003984 ENSTGUG00000003998 ENSTGUG00000004001 RAF1 (ENSTGUG00000004006) #22 MKRN2 (ENSTGUG00000004017) #24 MKRN2OS (ENSTGUG00000028016) #25 TSEN2 (ENSTGUG00000004044) #26 ENSTGUG00000025620 PPARG (ENSTGUG00000004069) #28 TIMP4 (ENSTGUG00000019602) #29 ENSTGUG00000025121 SYN2 (ENSTGUG00000004093) #30 TAMM41 (ENSTGUG00000004121) #31 VGLL4 (ENSTGUG00000004136) #32 ATG7 (ENSTGUG00000004145) #33 HRH1 (ENSTGUG00000004180) #35 SLC6A1 (ENSTGUG00000004182) #37 SLC6A11 (ENSTGUG00000004225) ATP2B2 (ENSTGUG00000004296) Common canary MODERN SPECIES 15 ENSSCAG00000010627 FBLN2 (ENSSCAG00000010640) HDAC11 (ENSSCAG00000010687) NUP210 (ENSSCAG00000010702) IQSEC1 (ENSSCAG00000010741) ACAD9 (ENSSCAG00000010788) ENSSCAG00000010943 ENSSCAG00000010945 ENSSCAG00000010950 GP9 (ENSSCAG00000010953) RAB43 (ENSSCAG00000010955) ENSSCAG00000010990 ISY1 (ENSSCAG00000011046) ENSSCAG00000011053 ENSSCAG00000011058 RAF1 (ENSSCAG00000011068) #22 MKRN2 (ENSSCAG00000011091) #24 MKRN2OS (ENSSCAG00000011095) #25 TSEN2 (ENSSCAG00000011099) #26 PPARG (ENSSCAG00000011103) #28 SYN2 (ENSSCAG00000011108) #30 TIMP4 (ENSSCAG00000011112) #29 TAMM41 (ENSSCAG00000011113) #31 VGLL4 (ENSSCAG00000011116) #32 ATG7 (ENSSCAG00000011122) #33 HRH1 (ENSSCAG00000011131) #35 SLC6A1 (ENSSCAG00000011359) #37 SLC6A11 (ENSSCAG00000012356) ATP2B2 (ENSSCAG00000012674) IARS1 (ENSSCAG00000012686) ENSSCAG00000012697 Medium ground finch MODERN SPECIES 321 GP9 (ENSGFOG00000010358) RAB43 (ENSGFOG00000010361) ENSGFOG00000010368 ENSGFOG00000010387 ENSGFOG00000010397 ENSGFOG00000010404 RAF1 (ENSGFOG00000010417) #22 MKRN2 (ENSGFOG00000010465) #24 TSEN2 (ENSGFOG00000009700) #26 PPARG (ENSGFOG00000010112) #28 SYN2 (ENSGFOG00000010635) #30 Great tit MODERN SPECIES 3 IPPK (ENSPMJG00000005095) ECM2 (ENSPMJG00000005093) ASPN (ENSPMJG00000005091) OMD (ENSPMJG00000005090) OGN (ENSPMJG00000005089) CENPP (ENSPMJG00000005088) ENSPMJG00000005087 ENSPMJG00000005086 ENSPMJG00000005084 GP9 (ENSPMJG00000005082) RAB43 (ENSPMJG00000005081) ENSPMJG00000005079 ISY1 (ENSPMJG00000005074) ENSPMJG00000005069 ENSPMJG00000005065 RAF1 (ENSPMJG00000005061) #22 ENSPMJG00000005058 #24 MKRN2OS (ENSPMJG00000005056) #25 TSEN2 (ENSPMJG00000005055) #26 PPARG (ENSPMJG00000005054) #28 ENSPMJG00000005053 #30 TIMP4 (ENSPMJG00000005043) #29 ENSPMJG00000005042 #30 TAMM41 (ENSPMJG00000005039) #31 VGLL4 (ENSPMJG00000005038) #32 ATG7 (ENSPMJG00000005007) #33 HRH1 (ENSPMJG00000005006) #35 SLC6A1 (ENSPMJG00000004995) #37 SLC6A11 (ENSPMJG00000004374) ATP2B2 (ENSPMJG00000004350) IARS1 (ENSPMJG00000004334) Neognathae_c ANCESTRAL SPECIES 21 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00620000089227 Golden eagle MODERN SPECIES 12 BARX1 (ENSACCG00020011266) PTPDC1 (ENSACCG00020011283) WNT7A (ENSACCG00020011302) FBLN2 (ENSACCG00020009352) HDAC11 (ENSACCG00020009388) NUP210 (ENSACCG00020009416) IQSEC1 (ENSACCG00020009446) ACAD9 (ENSACCG00020009474) CFAP92 (ENSACCG00020009502) ENSACCG00020009517 GP9 (ENSACCG00020009526) RAB43 (ENSACCG00020009539) ENSACCG00020009638 ISY1 (ENSACCG00020009699) ENSACCG00020009718 RAF1 (ENSACCG00020009762) #22 MKRN2 (ENSACCG00020009843) #24 MKRN2OS (ENSACCG00020009863) #25 TSEN2 (ENSACCG00020009874) #26 PPARG (ENSACCG00020009885) #28 SYN2 (ENSACCG00020009920) #30 TIMP4 (ENSACCG00020009945) #29 TAMM41 (ENSACCG00020009963) #31 VGLL4 (ENSACCG00020009982) #32 ATG7 (ENSACCG00020010015) #33 HRH1 (ENSACCG00020010042) #35 SLC6A1 (ENSACCG00020010053) #37 SLC6A11 (ENSACCG00020010066) ATP2B2 (ENSACCG00020010108) IARS1 (ENSACCG00020010143) ENSACCG00020010173 Kakapo MODERN SPECIES 3 PTPDC1 (ENSSHBG00005007285) WNT7A (ENSSHBG00005007337) FBLN2 (ENSSHBG00005007366) ENSSHBG00005007405 HDAC11 (ENSSHBG00005007414) NUP210 (ENSSHBG00005007487) IQSEC1 (ENSSHBG00005007655) ACAD9 (ENSSHBG00005007759) CFAP92 (ENSSHBG00005007781) ENSSHBG00005007802 GP9 (ENSSHBG00005007812) RAB43 (ENSSHBG00005007820) ENSSHBG00005007853 ISY1 (ENSSHBG00005007896) ENSSHBG00005007914 RAF1 (ENSSHBG00005007932) #22 MKRN2 (ENSSHBG00005007960) #24 MKRN2OS (ENSSHBG00005007967) #25 TSEN2 (ENSSHBG00005007982) #26 PPARG (ENSSHBG00005008004) #28 SYN2 (ENSSHBG00005008017) #30 TIMP4 (ENSSHBG00005008034) #29 TAMM41 (ENSSHBG00005008045) #31 VGLL4 (ENSSHBG00005008062) #32 ATG7 (ENSSHBG00005008229) #33 HRH1 (ENSSHBG00005009603) #35 SLC6A1 (ENSSHBG00005009619) #37 SLC6A11 (ENSSHBG00005009639) ATP2B2 (ENSSHBG00005009663) IARS1 (ENSSHBG00005009904) ENSSHBG00005010633 African ostrich MODERN SPECIES 1066 FAM120A (ENSSCUG00000015224) PHF2 (ENSSCUG00000015198) PTPDC1 (ENSSCUG00000015185) ENSSCUG00000015181 WNT7A (ENSSCUG00000015175) FBLN2 (ENSSCUG00000015170) HDAC11 (ENSSCUG00000015163) NUP210 (ENSSCUG00000015147) ACAD9 (ENSSCUG00000015133) CFAP92 (ENSSCUG00000015116) GP9 (ENSSCUG00000015105) RAB43 (ENSSCUG00000015101) ENSSCUG00000015094 ISY1 (ENSSCUG00000015087) ENSSCUG00000015086 RAF1 (ENSSCUG00000015081) #22 MKRN2 (ENSSCUG00000015071) #24 MKRN2OS (ENSSCUG00000015069) #25 TSEN2 (ENSSCUG00000015062) #26 PPARG (ENSSCUG00000015050) #28 SYN2 (ENSSCUG00000015041) #30 TIMP4 (ENSSCUG00000015038) #29 TAMM41 (ENSSCUG00000015017) #31 VGLL4 (ENSSCUG00000015010) #32 ATG7 (ENSSCUG00000015003) #33 HRH1 (ENSSCUG00000014994) #35 SLC6A1 (ENSSCUG00000014975) #37 SLC6A11 (ENSSCUG00000014961) ATP2B2 (ENSSCUG00000014930) IARS1 (ENSSCUG00000014894) NOL8 (ENSSCUG00000014881) Australian saltwater crocodile MODERN SPECIES 37 ENSCPRG00005019150 WNT7A (ENSCPRG00005019151) FBLN2 (ENSCPRG00005019153) HDAC11 (ENSCPRG00005019154) NUP210 (ENSCPRG00005019156) IQSEC1 (ENSCPRG00005019158) ACAD9 (ENSCPRG00005019159) CFAP92 (ENSCPRG00005019160) ENSCPRG00005019161 GP9 (ENSCPRG00005019162) ENSCPRG00005019163 RAB43 (ENSCPRG00005019165) ENSCPRG00005019166 ISY1 (ENSCPRG00005019167) ENSCPRG00005019169 RAF1 (ENSCPRG00005019170) #22 MKRN2 (ENSCPRG00005019171) #24 MKRN2OS (ENSCPRG00005019172) #25 TSEN2 (ENSCPRG00005019173) #26 PPARG (ENSCPRG00005019174) #28 SYN2 (ENSCPRG00005019176) #30 TIMP4 (ENSCPRG00005019177) #29 TAMM41 (ENSCPRG00005019178) #31 VGLL4 (ENSCPRG00005019180) #32 ATG7 (ENSCPRG00005019181) #33 HRH1 (ENSCPRG00005019183) #35 SLC6A1 (ENSCPRG00005019184) #37 SLC6A11 (ENSCPRG00005019185) ENSCPRG00005019186 IARS1 (ENSCPRG00005019188) OGN (ENSCPRG00005019192) Cryptodira ANCESTRAL SPECIES 41 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569.b ENSGT00940000161461 ENSGT00550000074921 ENSGT00390000004860 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00390000004113 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569.b ENSGT00940000161461 ENSGT00550000074921 ENSGT00390000004860.nb Emydidae ANCESTRAL SPECIES 9 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569.b ENSGT00940000161461 ENSGT00550000074921 ENSGT00390000004860.nb Three-toed box turtle MODERN SPECIES 107 IQSEC1 (ENSTMTG00000010796) ACAD9 (ENSTMTG00000010840) CFAP92 (ENSTMTG00000010898) EFCC1 (ENSTMTG00000010945) GP9 (ENSTMTG00000010971) RAB43 (ENSTMTG00000015431) ENSTMTG00000015448 ISY1 (ENSTMTG00000015483) ENSTMTG00000015505 RAF1 (ENSTMTG00000015520) #22 MKRN2 (ENSTMTG00000015544) #24 ENSTMTG00000015561 TSEN2 (ENSTMTG00000015573) #26 PPARG (ENSTMTG00000015596) #28 SYN2 (ENSTMTG00000015621) #30 TIMP4 (ENSTMTG00000015688) #29 TAMM41 (ENSTMTG00000015707) #31 VGLL4 (ENSTMTG00000015729) #32 ATG7 (ENSTMTG00000015759) #33 HRH1 (ENSTMTG00000015850) #35 SLC6A1 (ENSTMTG00000015874) #37 SLC6A11 (ENSTMTG00000016054) ENSTMTG00000016217 IARS1 (ENSTMTG00000016725) ENSTMTG00000016954 painted turtle MODERN SPECIES 14 ENSCPBG00000026342 RAB43 (ENSCPBG00000026343) ENSCPBG00000026344 ISY1 (ENSCPBG00000026346) ENSCPBG00000026348 ENSCPBG00000026349 RAF1 (ENSCPBG00000026352) #22 MKRN2 (ENSCPBG00000026356) #24 MKRN2OS (ENSCPBG00000026357) #25 TSEN2 (ENSCPBG00000026359) #26 PPARG (ENSCPBG00000026361) #28 SYN2 (ENSCPBG00000026365) #30 TIMP4 (ENSCPBG00000026368) #29 TAMM41 (ENSCPBG00000000254) #31 ATG7 (ENSCPBG00000000334) #33 HRH1 (ENSCPBG00000000415) #35 SLC6A1 (ENSCPBG00000000431) #37 ENSCPBG00000000450 SLC6A11 (ENSCPBG00000000487) ENSCPBG00000000579 IARS1 (ENSCPBG00000001174) NOL8 (ENSCPBG00000006773) Testudinidae ANCESTRAL SPECIES 5 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00940000167251 ENSGT00390000014109.c.b ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569.b ENSGT00940000161461 ENSGT00550000074921 ENSGT00390000004860.nb.c Goode s thornscrub tortoise MODERN SPECIES 21 WNT7A (ENSGEVG00005006076) FBLN2 (ENSGEVG00005005981) ENSGEVG00005005963 HDAC11 (ENSGEVG00005005930) NUP210 (ENSGEVG00005005766) IQSEC1 (ENSGEVG00005005708) ACAD9 (ENSGEVG00005005630) ENSGEVG00005005602 ENSGEVG00005005535 GP9 (ENSGEVG00005005510) RAB43 (ENSGEVG00005005485) ENSGEVG00005005430 ENSGEVG00005005367 ENSGEVG00005005307 ENSGEVG00005018078 RAF1 (ENSGEVG00005018027) #22 MKRN2 (ENSGEVG00005018003) #24 MKRN2OS (ENSGEVG00005017994) #25 TSEN2 (ENSGEVG00005017977) #26 PPARG (ENSGEVG00005017941) #28 TIMP4 (ENSGEVG00005017900) #29 SYN2 (ENSGEVG00005017832) #30 TAMM41 (ENSGEVG00005017797) #31 VGLL4 (ENSGEVG00005017769) #32 ATG7 (ENSGEVG00005017701) #33 HRH1 (ENSGEVG00005017663) #35 SLC6A1 (ENSGEVG00005017316) #37 SLC6A11 (ENSGEVG00005017116) ATP2B2 (ENSGEVG00005015471) IARS1 (ENSGEVG00005015240) ENSGEVG00005015198 Abingdon island giant tortoise MODERN SPECIES 252 RAF1 (ENSCABG00000022083) #22 MKRN2 (ENSCABG00000022121) #24 ENSCABG00000022122 TSEN2 (ENSCABG00000022123) #26 ENSCABG00000022124 PPARG (ENSCABG00000022125) #28 SYN2 (ENSCABG00000022126) #30 TIMP4 (ENSCABG00000022127) #29 Chinese turtle MODERN SPECIES 660 ISY1 (ENSPSIG00000009384) ENSPSIG00000009556 RAF1 (ENSPSIG00000009677) #22 MKRN2 (ENSPSIG00000010483) #24 MKRN2OS (ENSPSIG00000010665) #25 ENSPSIG00000010669 #26 PPARG (ENSPSIG00000011100) #28 SYN2 (ENSPSIG00000011238) #30 TIMP4 (ENSPSIG00000011745) #29 TAMM41 (ENSPSIG00000012037) #31 VGLL4 (ENSPSIG00000012119) #32 ATG7 (ENSPSIG00000012300) #33 HRH1 (ENSPSIG00000000512) #35 USP4 (ENSPSIG00000014081) ENSPSIG00000015319 ENSPSIG00000015328 ENSPSIG00000015446 Lepidosauria ANCESTRAL SPECIES 14 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00390000004860 Episquamata ANCESTRAL SPECIES 4 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00390000004860 Laterata ANCESTRAL SPECIES 1 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00390000004860.fb Common wall lizard MODERN SPECIES 10 WNT7A (ENSPMRG00000013303) FBLN2 (ENSPMRG00000013185) NUP210 (ENSPMRG00000012830) IQSEC1 (ENSPMRG00000012774) ACAD9 (ENSPMRG00000012761) CFAP92 (ENSPMRG00000012752) EFCC1 (ENSPMRG00000012744) ENSPMRG00000012740 ENSPMRG00000012736 GP9 (ENSPMRG00000012730) ENSPMRG00000012727 RAB43 (ENSPMRG00000012725) ENSPMRG00000012718 ISY1 (ENSPMRG00000012711) ENSPMRG00000012709 RAF1 (ENSPMRG00000012698) #22 MKRN2 (ENSPMRG00000012692) #24 MKRN2OS (ENSPMRG00000012689) #25 TSEN2 (ENSPMRG00000012682) #26 PPARG (ENSPMRG00000012674) #28 ENSPMRG00000012669 TIMP4 (ENSPMRG00000012664) #29 SYN2 (ENSPMRG00000012608) #30 TAMM41 (ENSPMRG00000012590) #31 VGLL4 (ENSPMRG00000012585) #32 ATG7 (ENSPMRG00000012572) #33 HRH1 (ENSPMRG00000012568) #35 ENSPMRG00000012565 SLC6A1 (ENSPMRG00000012556) #37 SLC6A11 (ENSPMRG00000012549) ATP2B2 (ENSPMRG00000012496) Argentine black and white tegu MODERN SPECIES 8 ENSSMRG00000019600 WNT7A (ENSSMRG00000019599) ENSSMRG00000019598 FBLN2 (ENSSMRG00000019596) NUP210 (ENSSMRG00000019594) IQSEC1 (ENSSMRG00000019592) ACAD9 (ENSSMRG00000019591) ENSSMRG00000019590 ENSSMRG00000019589 GP9 (ENSSMRG00000019588) ENSSMRG00000019587 RAB43 (ENSSMRG00000019586) ENSSMRG00000019585 ISY1 (ENSSMRG00000019584) ENSSMRG00000019583 RAF1 (ENSSMRG00000019582) #22 MKRN2 (ENSSMRG00000019581) #24 MKRN2OS (ENSSMRG00000019580) #25 TSEN2 (ENSSMRG00000019579) #26 PPARG (ENSSMRG00000019578) #28 TIMP4 (ENSSMRG00000019576) #29 SYN2 (ENSSMRG00000019575) #30 TAMM41 (ENSSMRG00000019573) #31 VGLL4 (ENSSMRG00000019572) #32 ATG7 (ENSSMRG00000019571) #33 HRH1 (ENSSMRG00000019569) #35 SLC6A1 (ENSSMRG00000019568) #37 SLC6A11 (ENSSMRG00000019567) ENSSMRG00000014887 IARS1 (ENSSMRG00000014856) RPL29 (ENSSMRG00000014854) Toxicofera ANCESTRAL SPECIES 3 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000161461 ENSGT00550000074921 ENSGT00390000004860 Elapidae ANCESTRAL SPECIES 2 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062.k #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569.d ENSGT00940000161461 ENSGT00550000074921 ENSGT00390000004860 Elapidae_a ANCESTRAL SPECIES 8 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062.k #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569.d ENSGT00940000161461 ENSGT00550000074921 ENSGT00390000004860 Acanthophiinae ANCESTRAL SPECIES 10 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109.d ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062.k #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569.d ENSGT00940000161461 ENSGT00550000074921 ENSGT00390000004860 Mainland tiger snake MODERN SPECIES 2 ENSNSUG00000020156 ENSNSUG00000020151 WNT7A (ENSNSUG00000020150) FBLN2 (ENSNSUG00000020149) NUP210 (ENSNSUG00000020136) ENSNSUG00000020131 IQSEC1 (ENSNSUG00000020130) ACAD9 (ENSNSUG00000020129) ENSNSUG00000020128 GP9 (ENSNSUG00000020125) ENSNSUG00000020124 RAB43 (ENSNSUG00000020123) ENSNSUG00000020122 ISY1 (ENSNSUG00000020121) ENSNSUG00000020120 RAF1 (ENSNSUG00000020119) #22 MKRN2 (ENSNSUG00000020117) #24 ENSNSUG00000020116 TSEN2 (ENSNSUG00000020115) #26 PPARG (ENSNSUG00000020114) #28 ENSNSUG00000020113 #30 Eastern brown snake MODERN SPECIES 3 ENSPTXG00000006804 ENSPTXG00000006808 WNT7A (ENSPTXG00000006810) FBLN2 (ENSPTXG00000006820) NUP210 (ENSPTXG00000006850) IQSEC1 (ENSPTXG00000006860) ACAD9 (ENSPTXG00000007049) CFAP92 (ENSPTXG00000007050) EFCC1 (ENSPTXG00000007051) GP9 (ENSPTXG00000007052) ENSPTXG00000007053 RAB43 (ENSPTXG00000007054) ENSPTXG00000007055 ISY1 (ENSPTXG00000007061) ENSPTXG00000007062 RAF1 (ENSPTXG00000007063) #22 MKRN2 (ENSPTXG00000007064) #24 MKRN2OS (ENSPTXG00000007065) #25 TSEN2 (ENSPTXG00000007066) #26 PPARG (ENSPTXG00000007067) #28 SYN2 (ENSPTXG00000007068) #30 ENSPTXG00000007073 #29 TAMM41 (ENSPTXG00000007075) #31 VGLL4 (ENSPTXG00000007085) #32 ATG7 (ENSPTXG00000007086) #33 HRH1 (ENSPTXG00000007087) #35 SLC6A1 (ENSPTXG00000007090) #37 SLC6A11 (ENSPTXG00000007128) ATP2B2 (ENSPTXG00000007129) IARS1 (ENSPTXG00000009498) NOL8 (ENSPTXG00000009500) Blue-lipped sea krait MODERN SPECIES 9066 RAF1 (ENSLLTG00000012297) #22 MKRN2 (ENSLLTG00000012312) #24 Indian cobra MODERN SPECIES 1 WNT7A (ENSNNAG00000017764) FBLN2 (ENSNNAG00000017789) ENSNNAG00000017810 NUP210 (ENSNNAG00000017830) IQSEC1 (ENSNNAG00000017851) ACAD9 (ENSNNAG00000017867) CFAP92 (ENSNNAG00000017912) EFCC1 (ENSNNAG00000017915) ENSNNAG00000017916 ENSNNAG00000017919 RAB43 (ENSNNAG00000017921) ENSNNAG00000017924 ISY1 (ENSNNAG00000017943) ENSNNAG00000017946 ENSNNAG00000017950 RAF1 (ENSNNAG00000017955) #22 MKRN2 (ENSNNAG00000017961) #24 MKRN2OS (ENSNNAG00000017966) #25 TSEN2 (ENSNNAG00000017971) #26 PPARG (ENSNNAG00000017984) #28 SYN2 (ENSNNAG00000017991) #30 ENSNNAG00000018001 #29 TAMM41 (ENSNNAG00000018006) #31 VGLL4 (ENSNNAG00000018012) #32 ATG7 (ENSNNAG00000018034) #33 HRH1 (ENSNNAG00000018100) #35 SLC6A1 (ENSNNAG00000018109) #37 SLC6A11 (ENSNNAG00000018147) ATP2B2 (ENSNNAG00000018213) ENSNNAG00000018337 IARS1 (ENSNNAG00000018371) Lizard MODERN SPECIES 1 ENSACAG00000044780 ENSACAG00000043115 ENSACAG00000043082 ENSACAG00000045372 ENSACAG00000012926 ACAD9 (ENSACAG00000012998) ENSACAG00000013119 ENSACAG00000013121 GP9 (ENSACAG00000022777) ENSACAG00000013124 ENSACAG00000013126 ENSACAG00000013142 ISY1 (ENSACAG00000013166) ENSACAG00000038503 MKRN2 (ENSACAG00000013310) #24 RAF1 (ENSACAG00000013194) #22 MKRN2OS (ENSACAG00000029532) #25 TSEN2 (ENSACAG00000013345) #26 PPARG (ENSACAG00000013360) #28 TIMP4 (ENSACAG00000013457) #29 ENSACAG00000028862 SYN2 (ENSACAG00000013404) #30 TAMM41 (ENSACAG00000010318) #31 VGLL4 (ENSACAG00000010299) #32 ATG7 (ENSACAG00000010224) #33 HRH1 (ENSACAG00000010219) #35 ENSACAG00000043799 ENSACAG00000036621 ENSACAG00000035306 SLC6A1 (ENSACAG00000010020) #37 ENSACAG00000041468 tuatara MODERN SPECIES 1318 PREX1 (ENSSPUG00000017929) RAB43 (ENSSPUG00000017960) ENSSPUG00000017987 ISY1 (ENSSPUG00000018050) ENSSPUG00000018059 RAF1 (ENSSPUG00000018074) #22 MKRN2 (ENSSPUG00000018086) #24 MKRN2OS (ENSSPUG00000018090) #25 TSEN2 (ENSSPUG00000018099) #26 PPARG (ENSSPUG00000018117) #28 SYN2 (ENSSPUG00000018134) #30 TIMP4 (ENSSPUG00000018140) #29 TAMM41 (ENSSPUG00000018148) #31 Anura ANCESTRAL SPECIES 338 ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839 #25 ENSGT00390000013266 #26 ENSGT00390000014109 Leishan spiny toad MODERN SPECIES 11 ENSLLEG00000024481 ENSLLEG00000024511 IQSEC1 (ENSLLEG00000024615) ACAD9 (ENSLLEG00000025523) ENSLLEG00000026113 ENSLLEG00000026375 GP9 (ENSLLEG00000026438) ENSLLEG00000026482 ENSLLEG00000026565 ENSLLEG00000026610 FRMD4B (ENSLLEG00000026638) ENSLLEG00000026927 LMOD3 (ENSLLEG00000026945) ARL6IP5 (ENSLLEG00000026982) ENSLLEG00000027044 RAF1 (ENSLLEG00000027363) #22 ENSLLEG00000027659 MKRN2 (ENSLLEG00000027692) #24 MKRN2OS (ENSLLEG00000027800) #25 ENSLLEG00000027826 #26 ISY1 (ENSLLEG00000027932) ENSLLEG00000028000 RAB43 (ENSLLEG00000028054) ENSLLEG00000028107 MITF (ENSLLEG00000028151) ENSLLEG00000028405 CDC73 (ENSLLEG00000028448) GLRX2 (ENSLLEG00000028565) IVNS1ABP (ENSLLEG00000028612) ENSLLEG00000028673 ENSLLEG00000028682 Frog MODERN SPECIES 4 ENSXETG00000042603 wnt7a (ENSXETG00000042176) ENSXETG00000024197 ENSXETG00000041612 XB5944457 [provisional] (ENSXETG00000012105) #37 ENSXETG00000049123 ENSXETG00000045682 ENSXETG00000045653 uqcrc1 (ENSXETG00000021470) nisch (ENSXETG00000021467) ENSXETG00000045029 ENSXETG00000043200 ENSXETG00000042389 ENSXETG00000038805 pparg (ENSXETG00000017422) #28 raf1 (ENSXETG00000020163) #22 mkrn2 (ENSXETG00000043301) #24 mkrn2os (ENSXETG00000041950) #25 ENSXETG00000042890 itih3 (ENSXETG00000006887) ENSXETG00000046560 nek4 (ENSXETG00000006888) gnl3 (ENSXETG00000013669) spcs1 (ENSXETG00000013668) glt8d1 (ENSXETG00000042897) ENSXETG00000049370 ENSXETG00000043218 pbrm1 (ENSXETG00000013671) NT5DC2 (ENSXETG00000047019) STAB1 (ENSXETG00000044486) Coelacanth MODERN SPECIES 1258 ENSLACG00000000602 RAB43 (ENSLACG00000002676) zgc:77375 (ENSLACG00000003572) ISY1 (ENSLACG00000004490) cnbpb (ENSLACG00000005327) ENSLACG00000006992 RAF1 (ENSLACG00000007082) #22 MKRN2 (ENSLACG00000007834) #24 TSEN2 (ENSLACG00000008466) #26 PPARG (ENSLACG00000009212) #28 ENSLACG00000010251 #30 TIMP4 (ENSLACG00000010983) #29 ENSLACG00000011638 #30 Actinopterygii ANCESTRAL SPECIES 14 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00530000064244.a ENSGT00390000004199 ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839.b #25 ENSGT01030000235208 ENSGT00390000003839.a #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062 #30 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00550000074921 Neopterygii ANCESTRAL SPECIES 38 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00530000064244.a ENSGT00390000004199 ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839.b #25 ENSGT01030000235208 ENSGT00390000003839.a #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000156062 #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027 #37 ENSGT00940000157569 ENSGT00940000166500 Osteoglossocephalai ANCESTRAL SPECIES 1 ENSGT00940000158148 ENSGT00940000160218 ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00990000205530 ENSGT00390000004199 ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839.b #25 ENSGT00390000003839.a #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798 #29 ENSGT00940000156062.m #30 ENSGT00390000000616 #31 ENSGT00390000003282.B.f #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027.b #37 ENSGT00940000157569 ENSGT00940000166500 ENSGT00550000074921 Clupeocephala ANCESTRAL SPECIES 347 ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000158273 #28 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b Euteleosteomorpha ANCESTRAL SPECIES 11 ENSGT00530000063687.b.b.a ##18 ENSGT00660000097455 ENSGT00940000160255 ENSGT00730000111286 ENSGT00940000161421 ENSGT00940000157794 ENSGT00940000179763 ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000158273 #28 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00740000116961 ENSGT00940000157379 Acanthomorphata ANCESTRAL SPECIES 3 ENSGT00940000157161.a.b ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00940000166256 ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 Euacanthomorphacea ANCESTRAL SPECIES 2 ENSGT00940000157161.a.b ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00940000166256 ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 Percomorphaceae ANCESTRAL SPECIES 7 ENSGT00940000157161.a.b ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00940000166256 ENSGT00940000174536 ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d Tiger tail seahorse MODERN SPECIES 487 ENSHCOG00000003595 IQSEC1 (ENSHCOG00000003556) ENSHCOG00000003476 zgc:77375 (ENSHCOG00000003467) cnbpa (ENSHCOG00000003457) raf1a (ENSHCOG00000003447) #22 syn2a (ENSHCOG00000003422) #30 VGLL4 (ENSHCOG00000003393) #32 slc6a1a (ENSHCOG00000003383) #37 ENSHCOG00000003365 DUSP7 (ENSHCOG00000003353) mrps9 (ENSHCOG00000003338) ENSHCOG00000003331 jagn1b (ENSHCOG00000003324) ENSHCOG00000003317 FILIP1L (ENSHCOG00000000101) ENSHCOG00000003278 ccdc28a (ENSHCOG00000003252) ENSHCOG00000003239 ATP1A1 (ENSHCOG00000003216) ENSHCOG00000003177 Percomorphaceae_B ANCESTRAL SPECIES 6 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 ENSGT00940000156010.db Percomorphaceae_C ANCESTRAL SPECIES 4 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 ENSGT00940000156010.db Eupercaria ANCESTRAL SPECIES 4 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Tetraodontidae ANCESTRAL SPECIES 2 ENSGT00940000157794 ENSGT00940000157161.a.b ENSGT00940000164282.a ENSGT01030000235645 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000157379 ENSGT00940000159853 ENSGT00940000156010.db ENSGT00390000011620.a.a.b.f Tetraodon MODERN SPECIES 24 ENSTNIG00000017929 ENSTNIG00000000358 BRPF1 (ENSTNIG00000017930) ENSTNIG00000017931 ENSTNIG00000001362 FGD3 (ENSTNIG00000017932) BICD2 (ENSTNIG00000017933) ENSTNIG00000017934 zgc:171857 (ENSTNIG00000000393) WNT7A (ENSTNIG00000017935) FBLN2 (ENSTNIG00000017936) NUP210 (ENSTNIG00000017937) IQSEC1 (ENSTNIG00000017938) zgc:77375 (ENSTNIG00000017939) cnbpa (ENSTNIG00000017940) raf1a (ENSTNIG00000012621) #22 syn2a (ENSTNIG00000012620) #30 slc6a1a (ENSTNIG00000012619) #37 ENSTNIG00000012618 DUSP7 (ENSTNIG00000012617) ENSTNIG00000012616 spo11 (ENSTNIG00000012615) bmp7b (ENSTNIG00000012614) irf10 (ENSTNIG00000012613) ENSTNIG00000000162 ENSTNIG00000012612 MTG2 (ENSTNIG00000012611) SS18L1 (ENSTNIG00000012610) lsm14b (ENSTNIG00000012609) TAF4 (ENSTNIG00000012608) CDH4 (ENSTNIG00000012607) Fugu MODERN SPECIES 15 ENSTRUG00000032059 ENSTRUG00000009590 ENSTRUG00000029197 ENSTRUG00000009573 FGD3 (ENSTRUG00000009033) BICD2 (ENSTRUG00000008866) ENSTRUG00000008689 zgc:171857 (ENSTRUG00000008671) WNT7A (ENSTRUG00000019490) FBLN2 (ENSTRUG00000008141) NUP210 (ENSTRUG00000007616) IQSEC1 (ENSTRUG00000007493) ENSTRUG00000007485 zgc:77375 (ENSTRUG00000007342) cnbpa (ENSTRUG00000025415) raf1a (ENSTRUG00000006611) #22 Syn2B (ENSTRUG00000006203) #30 VGLL4 (ENSTRUG00000023743) #32 slc6a1a (ENSTRUG00000005690) #37 ENSTRUG00000005516 DUSP7 (ENSTRUG00000007779) spo11 (ENSTRUG00000004583) bmp7b (ENSTRUG00000003888) irf10 (ENSTRUG00000002917) ENSTRUG00000029935 ENSTRUG00000028740 ENSTRUG00000001661 MTG2 (ENSTRUG00000001561) SS18L1 (ENSTRUG00000028532) lsm14b (ENSTRUG00000001529) TAF4 (ENSTRUG00000001439) Eupecaria_A ANCESTRAL SPECIES 4 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Ballan wrasse MODERN SPECIES 26 BRPF1 (ENSLBEG00000005929) WNK2 (ENSLBEG00000006022) ENSLBEG00000006123 ENSLBEG00000006155 ENSLBEG00000006185 FGD3 (ENSLBEG00000006231) BICD2 (ENSLBEG00000006328) ENSLBEG00000006398 zgc:171857 (ENSLBEG00000006494) WNT7A (ENSLBEG00000006524) FBLN2 (ENSLBEG00000006569) NUP210 (ENSLBEG00000006661) IQSEC1 (ENSLBEG00000007008) zgc:77375 (ENSLBEG00000007066) ENSLBEG00000007132 raf1a (ENSLBEG00000007171) #22 syn2a (ENSLBEG00000007331) #30 VGLL4 (ENSLBEG00000007400) #32 slc6a1a (ENSLBEG00000007443) #37 ENSLBEG00000007505 DUSP7 (ENSLBEG00000007544) ENSLBEG00000007571 spo11 (ENSLBEG00000007627) bmp7b (ENSLBEG00000007667) irf10 (ENSLBEG00000007684) ENSLBEG00000007715 ENSLBEG00000007734 ENSLBEG00000007774 ENSLBEG00000007883 MTG2 (ENSLBEG00000007918) ENSLBEG00000007935 Eupecaria_B ANCESTRAL SPECIES 5 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Perciformes ANCESTRAL SPECIES 4 ENSGT01010000229954 ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Perciformes_a ANCESTRAL SPECIES 2 ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000157379 ENSGT00940000159853 ENSGT00940000156010.db Channel bull blenny MODERN SPECIES 21 ENSCGOG00000020849 ENSCGOG00000020843 ENSCGOG00000020840 ENSCGOG00000020673 BICD2 (ENSCGOG00000020666) ENSCGOG00000020661 zgc:171857 (ENSCGOG00000020653) WNT7A (ENSCGOG00000020647) ENSCGOG00000020645 FBLN2 (ENSCGOG00000020641) NUP210 (ENSCGOG00000019640) IQSEC1 (ENSCGOG00000019586) ENSCGOG00000019582 zgc:77375 (ENSCGOG00000019580) cnbpa (ENSCGOG00000019576) raf1a (ENSCGOG00000018805) #22 syn2a (ENSCGOG00000018244) #30 VGLL4 (ENSCGOG00000018227) #32 slc6a1a (ENSCGOG00000015410) #37 ENSCGOG00000015327 DUSP7 (ENSCGOG00000015322) ENSCGOG00000015315 spo11 (ENSCGOG00000015307) bmp7b (ENSCGOG00000015238) ENSCGOG00000015232 irf10 (ENSCGOG00000015215) ENSCGOG00000015211 ENSCGOG00000015209 MTG2 (ENSCGOG00000015183) SS18L1 (ENSCGOG00000015178) lsm14b (ENSCGOG00000015175) Pike perch MODERN SPECIES 31 ENSSLUG00000023233 ENSSLUG00000001441 ENSSLUG00000001444 ENSSLUG00000001463 BICD2 (ENSSLUG00000001602) ENSSLUG00000001665 zgc:171857 (ENSSLUG00000001686) WNT7A (ENSSLUG00000001695) ENSSLUG00000001699 FBLN2 (ENSSLUG00000001744) NUP210 (ENSSLUG00000001909) IQSEC1 (ENSSLUG00000002103) ENSSLUG00000002185 zgc:77375 (ENSSLUG00000002189) cnbpa (ENSSLUG00000002192) raf1a (ENSSLUG00000002257) #22 syn2a (ENSSLUG00000002630) #30 VGLL4 (ENSSLUG00000002747) #32 slc6a1a (ENSSLUG00000002771) #37 ENSSLUG00000002843 DUSP7 (ENSSLUG00000002848) ENSSLUG00000002852 spo11 (ENSSLUG00000002873) bmp7b (ENSSLUG00000002945) irf10 (ENSSLUG00000002990) ENSSLUG00000003021 ENSSLUG00000003028 ENSSLUG00000003044 MTG2 (ENSSLUG00000003074) ENSSLUG00000003090 lsm14b (ENSSLUG00000003099) Cottioidei ANCESTRAL SPECIES 2 ENSGT01010000229954 ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000163520.A.a.a.a.a.a.a.h ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Stickleback MODERN SPECIES 619 BRPF1 (ENSGACG00000000086) ENSGACG00000000084 ENSGACG00000000082 ENSGACG00000000081 FGD3 (ENSGACG00000000079) BICD2 (ENSGACG00000000075) ENSGACG00000000070 zgc:171857 (ENSGACG00000000069) WNT7A (ENSGACG00000000068) ENSGACG00000000066 FBLN2 (ENSGACG00000000065) NUP210 (ENSGACG00000000064) IQSEC1 (ENSGACG00000000063) zgc:77375 (ENSGACG00000000062) cnbpa (ENSGACG00000000061) raf1a (ENSGACG00000000060) #22 syn2a (ENSGACG00000000059) #30 ENSGACG00000000058 Lumpfish MODERN SPECIES 22 ENSCLMG00005019087 ENSCLMG00005019086 ENSCLMG00005019085 FGD3 (ENSCLMG00005018989) BICD2 (ENSCLMG00005018986) ENSCLMG00005018985 zgc:171857 (ENSCLMG00005018983) WNT7A (ENSCLMG00005018981) ENSCLMG00005018978 ENSCLMG00005018977 NUP210 (ENSCLMG00005018309) IQSEC1 (ENSCLMG00005018246) ENSCLMG00005018241 zgc:77375 (ENSCLMG00005018239) cnbpa (ENSCLMG00005018238) raf1a (ENSCLMG00005017410) #22 syn2a (ENSCLMG00005017371) #30 VGLL4 (ENSCLMG00005017367) #32 slc6a1a (ENSCLMG00005017364) #37 ENSCLMG00005017362 DUSP7 (ENSCLMG00005017361) ENSCLMG00005017344 spo11 (ENSCLMG00005017339) bmp7b (ENSCLMG00005017337) irf10 (ENSCLMG00005017332) ENSCLMG00005017328 ENSCLMG00005017324 ENSCLMG00005017321 MTG2 (ENSCLMG00005017318) ENSCLMG00005017314 LSM14B (ENSCLMG00005017294) Eupecaria_C ANCESTRAL SPECIES 5 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Eupercaria_incertae_sedis ANCESTRAL SPECIES 15 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 European seabass MODERN SPECIES 14 ENSDLAG00005031065 ENSDLAG00005009176 ENSDLAG00005027932 ENSDLAG00005008852 ENSDLAG00005008696 ENSDLAG00005008548 zgc:171857 (ENSDLAG00005008532) ENSDLAG00005028187 ENSDLAG00005030442 FBLN2 (ENSDLAG00005008121) ENSDLAG00005007677 IQSEC1 (ENSDLAG00005005257) ENSDLAG00005032793 ENSDLAG00005005128 cnbpa (ENSDLAG00005031817) raf1a (ENSDLAG00005004923) #22 syn2a (ENSDLAG00005004685) #30 ENSDLAG00005028508 #32 slc6a1a (ENSDLAG00005004349) #37 ENSDLAG00005004200 ENSDLAG00005026444 ENSDLAG00005004136 ENSDLAG00005004117 ENSDLAG00005004070 ENSDLAG00005004052 ENSDLAG00005004048 ENSDLAG00005004039 ENSDLAG00005004017 ENSDLAG00005003982 MTG2 (ENSDLAG00005032440) SS18L1 (ENSDLAG00005003909) Large yellow croaker MODERN SPECIES 18 NINJ1 (ENSLCRG00005006270) ENSLCRG00005006274 ENSLCRG00005006285 FGD3 (ENSLCRG00005006289) BICD2 (ENSLCRG00005006354) ENSLCRG00005006368 zgc:171857 (ENSLCRG00005006407) WNT7A (ENSLCRG00005006409) ENSLCRG00005006411 FBLN2 (ENSLCRG00005006413) NUP210 (ENSLCRG00005006427) IQSEC1 (ENSLCRG00005006530) ENSLCRG00005006541 zgc:77375 (ENSLCRG00005006542) cnbpa (ENSLCRG00005006543) raf1a (ENSLCRG00005006549) #22 syn2a (ENSLCRG00005006644) #30 VGLL4 (ENSLCRG00005007117) #32 slc6a1a (ENSLCRG00005007120) #37 ENSLCRG00005007163 DUSP7 (ENSLCRG00005007164) ENSLCRG00005007165 spo11 (ENSLCRG00005001447) bmp7b (ENSLCRG00005001589) IRF10 (ENSLCRG00005001665) ENSLCRG00005001688 ENSLCRG00005001702 ENSLCRG00005001718 ENSLCRG00005001758 ENSLCRG00005001839 MTG2 (ENSLCRG00005001847) Gilthead seabream MODERN SPECIES 21 ENSSAUG00010012885 ENSSAUG00010012887 ENSSAUG00010012888 ENSSAUG00010012889 ENSSAUG00010012891 BICD2 (ENSSAUG00010012894) ENSSAUG00010013152 zgc:171857 (ENSSAUG00010013155) WNT7A (ENSSAUG00010013157) FBLN2 (ENSSAUG00010013162) NUP210 (ENSSAUG00010013565) IQSEC1 (ENSSAUG00010013583) ENSSAUG00010013599 zgc:77375 (ENSSAUG00010013600) cnbpa (ENSSAUG00010013604) raf1a (ENSSAUG00010013610) #22 syn2a (ENSSAUG00010014102) #30 VGLL4 (ENSSAUG00010014228) #32 slc6a1a (ENSSAUG00010014234) #37 ENSSAUG00010014292 ENSSAUG00010014324 DUSP7 (ENSSAUG00010014328) ENSSAUG00010014329 spo11 (ENSSAUG00010014336) bmp7b (ENSSAUG00010014363) irf10 (ENSSAUG00010014372) ENSSAUG00010014374 ENSSAUG00010014377 ENSSAUG00010014380 ENSSAUG00010014382 MTG2 (ENSSAUG00010004113) Percomorphaceae_D ANCESTRAL SPECIES 4 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Carangaria ANCESTRAL SPECIES 2 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000163520.A.a.a.a.a.a.a.h ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00940000166256.b ENSGT00940000166256.a ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d Pleuronectoidei ANCESTRAL SPECIES 38 ENSGT00940000157161.a.b ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000157379 ENSGT00940000159853 ENSGT00940000156010.db Tongue sole MODERN SPECIES 1 nr2c2 (ENSCSEG00000021393) #9 wdr46 (ENSCSEG00000021394) B3GALT4 (ENSCSEG00000021395) ENSCSEG00000021396 ENSCSEG00000021397 SLC6A6 (ENSCSEG00000021398) grip2a (ENSCSEG00000021399) ENSCSEG00000021400 zgc:171857 (ENSCSEG00000021401) WNT7A (ENSCSEG00000021402) ENSCSEG00000021424 NUP210 (ENSCSEG00000021425) IQSEC1 (ENSCSEG00000021426) zgc:77375 (ENSCSEG00000021427) cnbpa (ENSCSEG00000021428) raf1a (ENSCSEG00000021429) #22 syn2a (ENSCSEG00000021430) #30 VGLL4 (ENSCSEG00000021431) #32 slc6a1a (ENSCSEG00000021432) #37 ENSCSEG00000021433 spryd4 (ENSCSEG00000021434) GLS2 (ENSCSEG00000021435) col2a1a (ENSCSEG00000021471) aaas (ENSCSEG00000021476) map3k12 (ENSCSEG00000021484) pcbp2 (ENSCSEG00000021490) ENSCSEG00000021501 rnf41 (ENSCSEG00000021504) dgkaa (ENSCSEG00000021507) tamalin (ENSCSEG00000021514) nr4a1 (ENSCSEG00000021518) Turbot MODERN SPECIES 2 ankrd52a (ENSSMAG00000020861) rnf41 (ENSSMAG00000020873) dgkaa (ENSSMAG00000020876) tamalin (ENSSMAG00000020882) nr4a1 (ENSSMAG00000020885) zgc:56699 (ENSSMAG00000020886) letmd1 (ENSSMAG00000020891) cd63 (ENSSMAG00000031724) nemp1 (ENSSMAG00000020897) ENSSMAG00000020898 ENSSMAG00000032462 ENSSMAG00000020901 ENSSMAG00000020906 ENSSMAG00000028219 ENSSMAG00000020914 raf1a (ENSSMAG00000020915) #22 syn2a (ENSSMAG00000020924) #30 ENSSMAG00000020938 #32 slc6a1a (ENSSMAG00000020940) #37 ENSSMAG00000020950 ENSSMAG00000020951 ENSSMAG00000032794 ENSSMAG00000020952 ENSSMAG00000020963 ENSSMAG00000020985 ENSSMAG00000020987 ENSSMAG00000025353 ENSSMAG00000031631 ENSSMAG00000028209 ENSSMAG00000038052 MTG2 (ENSSMAG00000000126) Carangaria_A ANCESTRAL SPECIES 1 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000163520.A.a.a.a.a.a.a.h ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Seriola ANCESTRAL SPECIES 8 ENSGT00940000157161.a.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000163520.A.a.a.a.a.a.a.h ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00940000166256.b ENSGT00940000166256.a ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d Yellowtail amberjack MODERN SPECIES 3185 ENSSLDG00000010887 ENSSLDG00000010903 ENSSLDG00000010926 FGD3 (ENSSLDG00000010948) BICD2 (ENSSLDG00000011006) ENSSLDG00000011040 zgc:171857 (ENSSLDG00000011065) WNT7A (ENSSLDG00000011092) ENSSLDG00000011108 FBLN2 (ENSSLDG00000011147) NUP210 (ENSSLDG00000011338) IQSEC1 (ENSSLDG00000011510) ENSSLDG00000011630 zgc:77375 (ENSSLDG00000011655) cnbpa (ENSSLDG00000011731) raf1a (ENSSLDG00000011758) #22 syn2a (ENSSLDG00000011845) #30 VGLL4 (ENSSLDG00000011880) #32 slc6a1a (ENSSLDG00000011897) #37 ENSSLDG00000011935 DUSP7 (ENSSLDG00000011957) ENSSLDG00000011995 spo11 (ENSSLDG00000012075) bmp7b (ENSSLDG00000012142) irf10 (ENSSLDG00000012207) ENSSLDG00000012498 ENSSLDG00000012515 ENSSLDG00000012547 MTG2 (ENSSLDG00000012653) SS18L1 (ENSSLDG00000012675) ENSSLDG00000012686 Greater amberjack MODERN SPECIES 16 ENSSDUG00000001021 ENSSDUG00000000999 ENSSDUG00000000993 FGD3 (ENSSDUG00000000908) BICD2 (ENSSDUG00000000859) ENSSDUG00000000747 zgc:171857 (ENSSDUG00000000727) WNT7A (ENSSDUG00000000696) ENSSDUG00000000685 FBLN2 (ENSSDUG00000000680) NUP210 (ENSSDUG00000000512) IQSEC1 (ENSSDUG00000000442) ENSSDUG00000000421 zgc:77375 (ENSSDUG00000000389) cnbpa (ENSSDUG00000000383) raf1a (ENSSDUG00000000302) #22 syn2a (ENSSDUG00000000252) #30 VGLL4 (ENSSDUG00000000240) #32 slc6a1a (ENSSDUG00000000159) #37 ENSSDUG00000000111 DUSP7 (ENSSDUG00000000089) ENSSDUG00000022838 spo11 (ENSSDUG00000022830) bmp7b (ENSSDUG00000022821) irf10 (ENSSDUG00000022811) ENSSDUG00000022805 ENSSDUG00000022793 ENSSDUG00000022787 ENSSDUG00000022785 MTG2 (ENSSDUG00000022779) ENSSDUG00000022774 Barramundi perch MODERN SPECIES 252 ENSLCAG00010018455 ENSLCAG00010018501 ENSLCAG00010018504 ENSLCAG00010018507 ENSLCAG00010018527 BICD2 (ENSLCAG00010018593) ENSLCAG00010018598 zgc:171857 (ENSLCAG00010018608) WNT7A (ENSLCAG00010018616) FBLN2 (ENSLCAG00010018624) NUP210 (ENSLCAG00010018685) IQSEC1 (ENSLCAG00010018949) ENSLCAG00010019403 zgc:77375 (ENSLCAG00010019404) cnbpa (ENSLCAG00010019408) raf1a (ENSLCAG00010019431) #22 syn2a (ENSLCAG00010019465) #30 VGLL4 (ENSLCAG00010019468) #32 slc6a1a (ENSLCAG00010019476) #37 ENSLCAG00010019519 DUSP7 (ENSLCAG00010019521) ENSLCAG00010019529 spo11 (ENSLCAG00010019536) bmp7b (ENSLCAG00010019543) irf10 (ENSLCAG00010019557) ENSLCAG00010019562 ENSLCAG00010019563 ENSLCAG00010019564 ENSLCAG00010019574 MTG2 (ENSLCAG00010019585) SS18L1 (ENSLCAG00010019593) Anabantaria ANCESTRAL SPECIES 3 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Zig-zag eel MODERN SPECIES 21 ENSMAMG00000027098 ENSMAMG00000024093 ENSMAMG00000024094 ENSMAMG00000024095 ENSMAMG00000024096 ENSMAMG00000024097 ENSMAMG00000024098 zgc:171857 (ENSMAMG00000024099) WNT7A (ENSMAMG00000026358) FBLN2 (ENSMAMG00000024101) NUP210 (ENSMAMG00000024102) IQSEC1 (ENSMAMG00000024103) ENSMAMG00000024104 ENSMAMG00000024105 cnbpa (ENSMAMG00000024106) raf1a (ENSMAMG00000024107) #22 syn2a (ENSMAMG00000024108) #30 ENSMAMG00000024286 #32 slc6a1a (ENSMAMG00000024110) #37 ENSMAMG00000024111 ENSMAMG00000024112 ENSMAMG00000024113 ENSMAMG00000024114 ENSMAMG00000024115 ENSMAMG00000024116 ENSMAMG00000024117 ENSMAMG00000024118 ENSMAMG00000024120 ENSMAMG00000024121 MTG2 (ENSMAMG00000024122) ENSMAMG00000024685 Anabantoidei ANCESTRAL SPECIES 2 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Siamese fighting fish MODERN SPECIES 18 BRPF1 (ENSBSLG00000014570) WNK2 (ENSBSLG00000014520) NINJ1 (ENSBSLG00000014476) ENSBSLG00000014448 FGD3 (ENSBSLG00000014105) BICD2 (ENSBSLG00000013666) ENSBSLG00000013265 zgc:171857 (ENSBSLG00000013102) WNT7A (ENSBSLG00000013059) FBLN2 (ENSBSLG00000012590) NUP210 (ENSBSLG00000012441) IQSEC1 (ENSBSLG00000011801) ENSBSLG00000011583 zgc:77375 (ENSBSLG00000011428) cnbpa (ENSBSLG00000011418) raf1a (ENSBSLG00000011398) #22 syn2a (ENSBSLG00000011244) #30 ENSBSLG00000011233 VGLL4 (ENSBSLG00000011229) #32 slc6a1a (ENSBSLG00000011021) #37 ENSBSLG00000010961 DUSP7 (ENSBSLG00000010940) spo11 (ENSBSLG00000010764) ENSBSLG00000010727 bmp7b (ENSBSLG00000010648) irf10 (ENSBSLG00000010614) ENSBSLG00000010585 ENSBSLG00000010151 ENSBSLG00000010146 ENSBSLG00000010122 icmt (ENSBSLG00000010111) Climbing perch MODERN SPECIES 20 ENSATEG00000028766 ENSATEG00000014845 ENSATEG00000014866 ENSATEG00000014884 FGD3 (ENSATEG00000014910) ENSATEG00000015065 zgc:171857 (ENSATEG00000015110) ENSATEG00000015120 ENSATEG00000025400 FBLN2 (ENSATEG00000015165) ENSATEG00000015201 IQSEC1 (ENSATEG00000015332) ENSATEG00000015459 ENSATEG00000029003 cnbpa (ENSATEG00000015473) raf1a (ENSATEG00000015487) #22 syn2a (ENSATEG00000015569) #30 ENSATEG00000015602 #32 slc6a1a (ENSATEG00000015611) #37 ENSATEG00000027776 ENSATEG00000015660 ENSATEG00000015672 ENSATEG00000015710 ENSATEG00000015733 ENSATEG00000015753 ENSATEG00000015767 ENSATEG00000026513 ENSATEG00000015788 ENSATEG00000015845 MTG2 (ENSATEG00000015862) ENSATEG00000015876 Ovalentaria ANCESTRAL SPECIES 6 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 ENSGT00940000156010.db Atherinomorphae ANCESTRAL SPECIES 3 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 ENSGT00940000156010.db Cyprinodontiformes ANCESTRAL SPECIES 4 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 ENSGT00940000156010.db Aplocheiloidei ANCESTRAL SPECIES ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a.f ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 ENSGT00940000156010.db Turquoise killifish MODERN SPECIES 1624 ZBTB39 (ENSNFUG00015024277) gpr182 (ENSNFUG00015024276) SUSD3 (ENSNFUG00015024268) FGD (ENSNFUG00015024228) ENSNFUG00015024222 BICD2 (ENSNFUG00015024202) ENSNFUG00015024197 FBXW12 (ENSNFUG00015024195) WNT7A (ENSNFUG00015024192) FBLN2 (ENSNFUG00015024178) NUP210 (ENSNFUG00015023752) CABZ01046283.1 (ENSNFUG00015023693) ENSNFUG00015023674 zgc:77375 (ENSNFUG00015023669) CNBPA (ENSNFUG00015023652) raf1a (ENSNFUG00015023636) #22 ENSNFUG00015023629 SYN2A (ENSNFUG00015023280) #30 VGLL4A (ENSNFUG00015023261) #32 SLC6A1 (ENSNFUG00015023232) #37 ENSNFUG00015023222 ENSNFUG00015023221 PFKFB2 (ENSNFUG00015020287) Nfu_g_1_001425 (ENSNFUG00015020168) SCUBE3 (ENSNFUG00015017462) ENSNFUG00015017358 rh50 (ENSNFUG00015017354) rbm39b (ENSNFUG00015017277) pabpc1l (ENSNFUG00015016889) YWHAB (ENSNFUG00015016859) ENSNFUG00015016852 Mangrove rivulus MODERN SPECIES 13 ENSKMAG00000014665 ENSKMAG00000014636 ENSKMAG00000014615 ENSKMAG00000014587 BICD2 (ENSKMAG00000014540) ENSKMAG00000014515 zgc:171857 (ENSKMAG00000014464) WNT7A (ENSKMAG00000014419) ENSKMAG00000014404 FBLN2 (ENSKMAG00000014363) NUP210 (ENSKMAG00000014183) IQSEC1 (ENSKMAG00000013915) ENSKMAG00000013820 zgc:77375 (ENSKMAG00000013780) cnbpa (ENSKMAG00000013742) raf1a (ENSKMAG00000013649) #22 syn2a (ENSKMAG00000013578) #30 VGLL4 (ENSKMAG00000013547) #32 slc6a1a (ENSKMAG00000013502) #37 ENSKMAG00000013462 DUSP7 (ENSKMAG00000013438) spo11 (ENSKMAG00000013368) bmp7b (ENSKMAG00000013338) irf10 (ENSKMAG00000013286) ENSKMAG00000013261 ENSKMAG00000013243 ENSKMAG00000013217 ENSKMAG00000012982 MTG2 (ENSKMAG00000012885) ENSKMAG00000012873 ENSKMAG00000012859 Cyprinodontoidei ANCESTRAL SPECIES 3 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d.c ENSGT00940000155218.A.d.d ENSGT00940000157379 ENSGT00940000159853 NAME_4 ANCESTRAL SPECIES 101 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000157379 ENSGT00940000159853 ENSGT00940000156010.db ENSGT00390000011620.a.a.b.f Mummichog MODERN SPECIES 2287 BICD2 (ENSFHEG00000002760) ENSFHEG00000002838 zgc:171857 (ENSFHEG00000002850) WNT7A (ENSFHEG00000002866) FBLN2 (ENSFHEG00000002878) NUP210 (ENSFHEG00000002917) IQSEC1 (ENSFHEG00000002939) ENSFHEG00000002951 zgc:77375 (ENSFHEG00000002970) cnbpa (ENSFHEG00000002985) raf1a (ENSFHEG00000003029) #22 syn2a (ENSFHEG00000003059) #30 VGLL4 (ENSFHEG00000003072) #32 slc6a1a (ENSFHEG00000003089) #37 ENSFHEG00000003111 DUSP7 (ENSFHEG00000003116) spo11 (ENSFHEG00000003166) bmp7b (ENSFHEG00000003184) irf10 (ENSFHEG00000003215) ENSFHEG00000003223 ENSFHEG00000003233 ENSFHEG00000003248 ENSFHEG00000003262 ENSFHEG00000003272 ENSFHEG00000003284 ENSFHEG00000003306 Sheepshead minnow MODERN SPECIES 320 ENSCVAG00000013381 ENSCVAG00000013329 ENSCVAG00000013313 ENSCVAG00000013300 BICD2 (ENSCVAG00000013282) ENSCVAG00000013221 zgc:171857 (ENSCVAG00000013150) WNT7A (ENSCVAG00000013142) ENSCVAG00000013127 FBLN2 (ENSCVAG00000013122) NUP210 (ENSCVAG00000013103) IQSEC1 (ENSCVAG00000012975) ENSCVAG00000012863 zgc:77375 (ENSCVAG00000012859) cnbpa (ENSCVAG00000012825) raf1a (ENSCVAG00000012816) #22 syn2a (ENSCVAG00000012786) #30 VGLL4 (ENSCVAG00000012712) #32 slc6a1a (ENSCVAG00000012675) #37 ENSCVAG00000012631 DUSP7 (ENSCVAG00000012607) spo11 (ENSCVAG00000012572) bmp7b (ENSCVAG00000012517) irf10 (ENSCVAG00000012497) ENSCVAG00000012483 ENSCVAG00000000663 ENSCVAG00000012464 MTG2 (ENSCVAG00000012457) SS18L1 (ENSCVAG00000012450) ENSCVAG00000012444 ENSCVAG00000012433 Poeciliinae ANCESTRAL SPECIES 2 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589.j ENSGT00940000155218.A.d.c ENSGT00940000155218.A.d.d ENSGT00940000161589.i ENSGT00940000157379 Poecilia ANCESTRAL SPECIES 14 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589.j ENSGT00940000155218.A.d.c ENSGT00940000155218.A.d.d ENSGT00940000161589.i ENSGT00940000157379 NAME_6 ANCESTRAL SPECIES 42 ENSGT00940000157161.a.b ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813.i ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589.j ENSGT00940000155218.A.d.c ENSGT00940000155218.A.d.d ENSGT00940000161589.i ENSGT00940000157379 Sailfin molly MODERN SPECIES 270 NINJ1 (ENSPLAG00000020465) ENSPLAG00000020403 ENSPLAG00000020387 FGD3 (ENSPLAG00000020368) BICD2 (ENSPLAG00000020355) ENSPLAG00000020313 zgc:171857 (ENSPLAG00000020232) WNT7A (ENSPLAG00000020226) FBLN2 (ENSPLAG00000020209) NUP210 (ENSPLAG00000020151) ENSPLAG00000020125 IQSEC1 (ENSPLAG00000020111) ENSPLAG00000020081 zgc:77375 (ENSPLAG00000020066) cnbpa (ENSPLAG00000019977) raf1a (ENSPLAG00000019961) #22 syn2a (ENSPLAG00000019880) #30 VGLL4 (ENSPLAG00000019847) #32 slc6a1a (ENSPLAG00000019835) #37 Amazon molly MODERN SPECIES 385 NINJ1 (ENSPFOG00000014789) ENSPFOG00000014800 ENSPFOG00000014832 FGD3 (ENSPFOG00000014867) BICD2 (ENSPFOG00000015060) ENSPFOG00000015229 zgc:171857 (ENSPFOG00000015281) WNT7A (ENSPFOG00000015340) FBLN2 (ENSPFOG00000015394) NUP210 (ENSPFOG00000015584) IQSEC1 (ENSPFOG00000015838) zgc:77375 (ENSPFOG00000015899) ENSPFOG00000020471 zgc:77375 (ENSPFOG00000024214) cnbpa (ENSPFOG00000015951) raf1a (ENSPFOG00000015974) #22 syn2a (ENSPFOG00000016034) #30 VGLL4 (ENSPFOG00000016081) #32 slc6a1a (ENSPFOG00000016096) #37 Guppy MODERN SPECIES 459 ENSPREG00000009706 ENSPREG00000009661 ENSPREG00000009611 FGD3 (ENSPREG00000009601) BICD2 (ENSPREG00000009582) ENSPREG00000009524 zgc:171857 (ENSPREG00000009493) WNT7A (ENSPREG00000009481) ENSPREG00000009466 FBLN2 (ENSPREG00000008686) NUP210 (ENSPREG00000008443) IQSEC1 (ENSPREG00000008328) ENSPREG00000008316 zgc:77375 (ENSPREG00000008306) cnbpa (ENSPREG00000008229) raf1a (ENSPREG00000008192) #22 syn2a (ENSPREG00000008158) #30 VGLL4 (ENSPREG00000008150) #32 slc6a1a (ENSPREG00000008121) #37 ENSPREG00000008090 DUSP7 (ENSPREG00000008076) spo11 (ENSPREG00000008058) bmp7b (ENSPREG00000008041) irf10 (ENSPREG00000007944) ENSPREG00000007919 ENSPREG00000007912 ENSPREG00000007880 MTG2 (ENSPREG00000007861) ENSPREG00000007853 ENSPREG00000007828 ENSPREG00000007817 Platyfish MODERN SPECIES NINJ1 (ENSXMAG00000022037) ENSXMAG00000027075 ENSXMAG00000017523 FGD3 (ENSXMAG00000017525) BICD2 (ENSXMAG00000017565) ENSXMAG00000017581 zgc:171857 (ENSXMAG00000017604) WNT7A (ENSXMAG00000017615) ENSXMAG00000017617 FBLN2 (ENSXMAG00000017618) NUP210 (ENSXMAG00000017633) IQSEC1 (ENSXMAG00000017845) ENSXMAG00000017843 zgc:77375 (ENSXMAG00000017656) cnbpa (ENSXMAG00000024938) raf1a (ENSXMAG00000017691) #22 syn2a (ENSXMAG00000017725) #30 VGLL4 (ENSXMAG00000017739) #32 slc6a1a (ENSXMAG00000017742) #37 ENSXMAG00000021120 DUSP7 (ENSXMAG00000017789) spo11 (ENSXMAG00000017799) bmp7b (ENSXMAG00000017817) irf10 (ENSXMAG00000017848) ENSXMAG00000028965 ENSXMAG00000017854 ENSXMAG00000009659 ENSXMAG00000017866 ENSXMAG00000028553 ENSXMAG00000028070 MTG2 (ENSXMAG00000015450) Oryzias ANCESTRAL SPECIES 4 ENSGT00940000157794 ENSGT00940000157161.a.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a.h ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589.l ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 ENSGT00940000156010.db Oryzias_b ANCESTRAL SPECIES 2 ENSGT00940000157794 ENSGT00940000157161.a.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a.h ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589.l ENSGT00940000161589.k.b ENSGT00940000161589.k.a ENSGT00940000155218.A.d ENSGT00940000157379 Indian medaka MODERN SPECIES 23 BRPF1 (ENSOMEG00000008644) ENSOMEG00000008590 ENSOMEG00000008552 ENSOMEG00000008523 FGD3 (ENSOMEG00000008487) BICD2 (ENSOMEG00000008421) ENSOMEG00000008380 zgc:171857 (ENSOMEG00000008331) WNT7A (ENSOMEG00000008310) FBLN2 (ENSOMEG00000008281) NUP210 (ENSOMEG00000008219) IQSEC1 (ENSOMEG00000008146) ENSOMEG00000008061 zgc:77375 (ENSOMEG00000008041) ENSOMEG00000007985 raf1a (ENSOMEG00000007930) #22 syn2a (ENSOMEG00000007816) #30 VGLL4 (ENSOMEG00000007778) #32 slc6a1a (ENSOMEG00000007745) #37 ENSOMEG00000007652 DUSP7 (ENSOMEG00000007613) spo11 (ENSOMEG00000007582) bmp7b (ENSOMEG00000007490) irf10 (ENSOMEG00000007467) ENSOMEG00000007446 ENSOMEG00000007441 ENSOMEG00000007403 ENSOMEG00000007324 ENSOMEG00000007305 ENSOMEG00000007287 MTG2 (ENSOMEG00000007270) Javanese ricefish MODERN SPECIES 21 BRPF1 (ENSOJAG00000008182) ENSOJAG00000008248 ENSOJAG00000008294 ENSOJAG00000008326 FGD3 (ENSOJAG00000008354) BICD2 (ENSOJAG00000008579) ENSOJAG00000009289 zgc:171857 (ENSOJAG00000009361) WNT7A (ENSOJAG00000009382) FBLN2 (ENSOJAG00000009396) NUP210 (ENSOJAG00000009431) IQSEC1 (ENSOJAG00000009867) ENSOJAG00000011312 zgc:77375 (ENSOJAG00000011339) cnbpa (ENSOJAG00000011380) raf1a (ENSOJAG00000011473) #22 syn2a (ENSOJAG00000011897) #30 VGLL4 (ENSOJAG00000012101) #32 slc6a1a (ENSOJAG00000012121) #37 ENSOJAG00000012274 DUSP7 (ENSOJAG00000012303) spo11 (ENSOJAG00000012351) bmp7b (ENSOJAG00000012453) irf10 (ENSOJAG00000012617) ENSOJAG00000012623 ENSOJAG00000012627 ENSOJAG00000012635 ENSOJAG00000012648 ENSOJAG00000012822 ENSOJAG00000012868 MTG2 (ENSOJAG00000012886) Oryzias_a ANCESTRAL SPECIES ENSGT00940000157161.a.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000157503.j ENSGT00940000159438 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a.h ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589.l.a ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 ENSGT00940000156010.db Japanese Medaka HdrR MODERN SPECIES 21 ENSORLG00000027702 ENSORLG00000027599 ENSORLG00000011170 BICD2 (ENSORLG00000011196) ENSORLG00000011215 zgc:171857 (ENSORLG00000023903) ENSORLG00000030368 zgc:171857 (ENSORLG00000011233) WNT7A (ENSORLG00000011261) FBLN2 (ENSORLG00000011304) NUP210 (ENSORLG00000011390) IQSEC1 (ENSORLG00000011415) ENSORLG00000011419 zgc:77375 (ENSORLG00000011428) cnbpa (ENSORLG00000011453) raf1a (ENSORLG00000011471) #22 syn2a (ENSORLG00000011479) #30 ENSORLG00000011494 #32 slc6a1a (ENSORLG00000011608) #37 ENSORLG00000011624 ENSORLG00000029873 ENSORLG00000011642 spo11 (ENSORLG00000011654) bmp7b (ENSORLG00000011720) irf10 (ENSORLG00000011745) ENSORLG00000025783 ENSORLG00000023244 ENSORLG00000024787 ENSORLG00000026260 ENSORLG00000028288 ENSORLG00000022337 Chinese medaka MODERN SPECIES 98 BRPF1 (ENSOSIG00000020422) ENSOSIG00000020444 ENSOSIG00000020446 ENSOSIG00000020448 ENSOSIG00000020500 BICD2 (ENSOSIG00000020906) ENSOSIG00000020978 zgc:171857 (ENSOSIG00000020987) WNT7A (ENSOSIG00000000057) FBLN2 (ENSOSIG00000000095) NUP210 (ENSOSIG00000000240) IQSEC1 (ENSOSIG00000000318) ENSOSIG00000000320 zgc:77375 (ENSOSIG00000000332) cnbpa (ENSOSIG00000000341) raf1a (ENSOSIG00000000385) #22 syn2a (ENSOSIG00000000496) #30 VGLL4 (ENSOSIG00000000954) #32 slc6a1a (ENSOSIG00000001003) #37 ENSOSIG00000006484 DUSP7 (ENSOSIG00000006493) spo11 (ENSOSIG00000006498) bmp7b (ENSOSIG00000006601) irf10 (ENSOSIG00000006636) ENSOSIG00000006639 ENSOSIG00000006642 ENSOSIG00000006648 ENSOSIG00000006655 MTG2 (ENSOSIG00000006658) SS18L1 (ENSOSIG00000006660) LSM14B (ENSOSIG00000006662) Ovalentaria_B ANCESTRAL SPECIES 2 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Pomacentridae ANCESTRAL SPECIES 2 ENSGT00940000157161.a.b ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Pomacentridae_A ANCESTRAL SPECIES 59 ENSGT00940000157161.a.b ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Amphiprion ANCESTRAL SPECIES 77 ENSGT00940000157161.a.b ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Orange clownfish MODERN SPECIES 22 WNK2 (ENSAPEG00000015669) NINJ1 (ENSAPEG00000015654) ENSAPEG00000015643 ENSAPEG00000015636 FGD3 (ENSAPEG00000015625) BICD2 (ENSAPEG00000015591) ENSAPEG00000015461 zgc:171857 (ENSAPEG00000015429) WNT7A (ENSAPEG00000015416) FBLN2 (ENSAPEG00000015393) NUP210 (ENSAPEG00000015229) IQSEC1 (ENSAPEG00000014627) ENSAPEG00000014509 zgc:77375 (ENSAPEG00000014465) cnbpa (ENSAPEG00000014455) raf1a (ENSAPEG00000014392) #22 syn2a (ENSAPEG00000014339) #30 VGLL4 (ENSAPEG00000014321) #32 slc6a1a (ENSAPEG00000014269) #37 ENSAPEG00000014232 DUSP7 (ENSAPEG00000014224) ENSAPEG00000014190 spo11 (ENSAPEG00000014057) bmp7b (ENSAPEG00000013999) irf10 (ENSAPEG00000013982) ENSAPEG00000013961 ENSAPEG00000013941 ENSAPEG00000013856 MTG2 (ENSAPEG00000013840) SS18L1 (ENSAPEG00000013802) ENSAPEG00000013779 Clown anemonefish MODERN SPECIES 3397 WNK2 (ENSAOCG00000007750) ENSAOCG00000007597 ENSAOCG00000007573 ENSAOCG00000000411 FGD3 (ENSAOCG00000007560) BICD2 (ENSAOCG00000007536) ENSAOCG00000007487 zgc:171857 (ENSAOCG00000007423) WNT7A (ENSAOCG00000007412) FBLN2 (ENSAOCG00000007393) NUP210 (ENSAOCG00000007358) IQSEC1 (ENSAOCG00000007206) zgc:77375 (ENSAOCG00000000375) ENSAOCG00000007095 cnbpa (ENSAOCG00000007087) raf1a (ENSAOCG00000007076) #22 syn2a (ENSAOCG00000007039) #30 VGLL4 (ENSAOCG00000006994) #32 slc6a1a (ENSAOCG00000006978) #37 ENSAOCG00000006927 DUSP7 (ENSAOCG00000006917) ENSAOCG00000006909 spo11 (ENSAOCG00000006884) bmp7b (ENSAOCG00000006837) irf10 (ENSAOCG00000006804) ENSAOCG00000006788 ENSAOCG00000006782 ENSAOCG00000006767 ENSAOCG00000006719 MTG2 (ENSAOCG00000006709) SS18L1 (ENSAOCG00000006696) Spiny chromis MODERN SPECIES 533 IQSEC1 (ENSAPOG00000010659) ENSAPOG00000010599 zgc:77375 (ENSAPOG00000010597) cnbpa (ENSAPOG00000010571) raf1a (ENSAPOG00000010557) #22 syn2a (ENSAPOG00000010466) #30 VGLL4 (ENSAPOG00000010447) #32 slc6a1a (ENSAPOG00000010425) #37 ENSAPOG00000010361 DUSP7 (ENSAPOG00000010353) ENSAPOG00000010344 spo11 (ENSAPOG00000010320) bmp7b (ENSAPOG00000010229) irf10 (ENSAPOG00000010188) ENSAPOG00000010154 ENSAPOG00000010145 ENSAPOG00000010127 MTG2 (ENSAPOG00000010041) SS18L1 (ENSAPOG00000010017) ENSAPOG00000010003 Bicolor damselfish MODERN SPECIES 1428 IQSEC1 (ENSSPAG00000019673) zgc:77375 (ENSSPAG00000019713) ENSSPAG00000019749 cnbpa (ENSSPAG00000019754) raf1a (ENSSPAG00000019773) #22 syn2a (ENSSPAG00000019841) #30 VGLL4 (ENSSPAG00000019858) #32 slc6a1a (ENSSPAG00000019874) #37 ENSSPAG00000019898 DUSP7 (ENSSPAG00000019914) ENSSPAG00000019923 spo11 (ENSSPAG00000019959) Cichlidae ANCESTRAL SPECIES ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Pseudocrenilabrinae ANCESTRAL SPECIES 5 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Pseudocrenilabrinae_A ANCESTRAL SPECIES 18 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Haplochromini ANCESTRAL SPECIES 20 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000182562 ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d ENSGT00940000157379 ENSGT00940000159853 Haplochromini_A ANCESTRAL SPECIES 17 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00950000183116.b.a.a.b.a.a.b ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000182562 ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000157379 ENSGT00940000159853 ENSGT00940000156010.db Haplochromini_B ANCESTRAL SPECIES 14 ENSGT00940000157794 ENSGT00940000157161.a.b ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000157379 ENSGT00940000159853 ENSGT00940000156010.db.m Zebra mbuna MODERN SPECIES 1103 ENSMZEG00005025842 ENSMZEG00005025867 ENSMZEG00005025870 ENSMZEG00005025872 ENSMZEG00005025875 BICD2 (ENSMZEG00005025878) ENSMZEG00005025883 zgc:171857 (ENSMZEG00005025886) WNT7A (ENSMZEG00005025887) FBLN2 (ENSMZEG00005025888) NUP210 (ENSMZEG00005025890) IQSEC1 (ENSMZEG00005025901) ENSMZEG00005025906 zgc:77375 (ENSMZEG00005025909) cnbpa (ENSMZEG00005025913) raf1a (ENSMZEG00005025919) #22 syn2a (ENSMZEG00005025923) #30 VGLL4 (ENSMZEG00005025925) #32 slc6a1a (ENSMZEG00005025927) #37 ENSMZEG00005025930 DUSP7 (ENSMZEG00005025931) ENSMZEG00005025936 spo11 (ENSMZEG00005025972) bmp7b (ENSMZEG00005025985) irf10 (ENSMZEG00005025986) ENSMZEG00005025990 ENSMZEG00005025992 ENSMZEG00005025993 MTG2 (ENSMZEG00005025997) SS18L1 (ENSMZEG00005025998) LSM14B (ENSMZEG00005026001) P. nyererei MODERN SPECIES 531 ENSPNYG00000005474 ENSPNYG00000005454 ENSPNYG00000005435 BICD2 (ENSPNYG00000005388) ENSPNYG00000005294 zgc:171857 (ENSPNYG00000005269) WNT7A (ENSPNYG00000005254) ENSPNYG00000005234 FBLN2 (ENSPNYG00000005214) NUP210 (ENSPNYG00000005109) ENSPNYG00000005083 IQSEC1 (ENSPNYG00000005048) ENSPNYG00000005038 zgc:77375 (ENSPNYG00000005031) cnbpa (ENSPNYG00000005020) raf1a (ENSPNYG00000004978) #22 syn2a (ENSPNYG00000004934) #30 VGLL4 (ENSPNYG00000004913) #32 slc6a1a (ENSPNYG00000004881) #37 ENSPNYG00000004864 DUSP7 (ENSPNYG00000004852) ENSPNYG00000004374 Burton s mouthbrooder MODERN SPECIES 527 ENSHBUG00000022201 ENSHBUG00000022185 ENSHBUG00000022176 BICD2 (ENSHBUG00000022158) ENSHBUG00000022074 zgc:171857 (ENSHBUG00000021967) WNT7A (ENSHBUG00000021931) ENSHBUG00000021914 FBLN2 (ENSHBUG00000000678) NUP210 (ENSHBUG00000021863) IQSEC1 (ENSHBUG00000021634) ENSHBUG00000021597 zgc:77375 (ENSHBUG00000021581) ENSHBUG00000021578 cnbpa (ENSHBUG00000021569) raf1a (ENSHBUG00000021557) #22 syn2a (ENSHBUG00000021521) #30 VGLL4 (ENSHBUG00000021482) #32 slc6a1a (ENSHBUG00000021465) #37 ENSHBUG00000021429 DUSP7 (ENSHBUG00000021408) ENSHBUG00000000657 Lyretail cichlid MODERN SPECIES 334 ENSNBRG00000021634 ENSNBRG00000021650 ENSNBRG00000021693 ENSNBRG00000021708 FGD3 (ENSNBRG00000021738) BICD2 (ENSNBRG00000021765) ENSNBRG00000021804 zgc:171857 (ENSNBRG00000021856) WNT7A (ENSNBRG00000021879) FBLN2 (ENSNBRG00000021897) NUP210 (ENSNBRG00000021969) IQSEC1 (ENSNBRG00000022045) ENSNBRG00000022062 zgc:77375 (ENSNBRG00000022074) cnbpa (ENSNBRG00000022113) raf1a (ENSNBRG00000022128) #22 syn2a (ENSNBRG00000022172) #30 VGLL4 (ENSNBRG00000022196) #32 slc6a1a (ENSNBRG00000022219) #37 ENSNBRG00000022240 DUSP7 (ENSNBRG00000022256) ENSNBRG00000022260 spo11 (ENSNBRG00000022278) bmp7b (ENSNBRG00000022300) irf10 (ENSNBRG00000022314) ENSNBRG00000022326 MTG2 (ENSNBRG00000022342) ENSNBRG00000022365 ENSNBRG00000022370 TAF4 (ENSNBRG00000022380) CDH4 (ENSNBRG00000022425) Nile tilapia MODERN SPECIES 12 ENSONIG00000017200 ENSONIG00000017198 ENSONIG00000017197 ENSONIG00000017195 BICD2 (ENSONIG00000017193) ENSONIG00000017192 zgc:171857 (ENSONIG00000017191) WNT7A (ENSONIG00000017190) ENSONIG00000017189 FBLN2 (ENSONIG00000017187) NUP210 (ENSONIG00000017176) IQSEC1 (ENSONIG00000042189) ENSONIG00000021140 zgc:77375 (ENSONIG00000017175) cnbpa (ENSONIG00000040402) raf1a (ENSONIG00000017170) #22 VGLL4 (ENSONIG00000017166) #32 syn2a (ENSONIG00000017168) #30 slc6a1a (ENSONIG00000017160) #37 ENSONIG00000017159 ENSONIG00000040172 spo11 (ENSONIG00000017154) DUSP7 (ENSONIG00000017157) bmp7b (ENSONIG00000017150) irf10 (ENSONIG00000017148) ENSONIG00000035271 ENSONIG00000017146 ENSONIG00000017145 ENSONIG00000017132 ENSONIG00000038637 ENSONIG00000041254 Midas cichlid MODERN SPECIES 732 ENSACIG00000004211 ENSACIG00000004171 ENSACIG00000004152 FGD3 (ENSACIG00000004039) BICD2 (ENSACIG00000003992) ENSACIG00000003923 zgc:171857 (ENSACIG00000003897) WNT7A (ENSACIG00000003878) ENSACIG00000003863 FBLN2 (ENSACIG00000003825) NUP210 (ENSACIG00000003714) IQSEC1 (ENSACIG00000003682) ENSACIG00000003675 zgc:77375 (ENSACIG00000003651) cnbpa (ENSACIG00000003540) raf1a (ENSACIG00000003513) #22 syn2a (ENSACIG00000003473) #30 VGLL4 (ENSACIG00000003459) #32 slc6a1a (ENSACIG00000003423) #37 ENSACIG00000003407 DUSP7 (ENSACIG00000003348) ENSACIG00000003311 spo11 (ENSACIG00000003282) ENSACIG00000003270 bmp7b (ENSACIG00000003253) irf10 (ENSACIG00000003233) ENSACIG00000003220 ENSACIG00000003197 MTG2 (ENSACIG00000003178) ENSACIG00000003167 LSM14B (ENSACIG00000003147) Pinecone sodierfish MODERN SPECIES 21 ENSMMDG00005016723 ENSMMDG00005016726 ENSMMDG00005016733 FGD3 (ENSMMDG00005016742) BICD2 (ENSMMDG00005016751) adtrp1 (ENSMMDG00005016780) ENSMMDG00005016785 zgc:171857 (ENSMMDG00005016792) WNT7A (ENSMMDG00005016795) FBLN2 (ENSMMDG00005016827) NUP210 (ENSMMDG00005017833) IQSEC1 (ENSMMDG00005018090) ENSMMDG00005018101 zgc:77375 (ENSMMDG00005018103) cnbpa (ENSMMDG00005018104) raf1a (ENSMMDG00005018107) #22 syn2a (ENSMMDG00005018489) #30 VGLL4 (ENSMMDG00005018494) #32 slc6a1a (ENSMMDG00005018503) #37 ENSMMDG00005018616 DUSP7 (ENSMMDG00005018620) ENSMMDG00005018624 spo11 (ENSMMDG00005018630) bmp7b (ENSMMDG00005018641) irf10 (ENSMMDG00005018643) ENSMMDG00005018649 ENSMMDG00005018651 MTG2 (ENSMMDG00005018652) ENSMMDG00005018654 lsm14b (ENSMMDG00005018657) CDH4 (ENSMMDG00005018665) Cod MODERN SPECIES ENSGMOG00000024353 ENSGMOG00000035790 ENSGMOG00000017340 ENSGMOG00000017305 ENSGMOG00000034969 adtrp1 (ENSGMOG00000033011) ENSGMOG00000017264 zgc:171857 (ENSGMOG00000017244) WNT7A (ENSGMOG00000031507) FBLN2 (ENSGMOG00000017143) NUP210 (ENSGMOG00000017069) IQSEC1 (ENSGMOG00000017042) ENSGMOG00000026511 ENSGMOG00000017018 cnbpa (ENSGMOG00000017012) raf1a (ENSGMOG00000016976) #22 syn2a (ENSGMOG00000016959) #30 ENSGMOG00000023206 #32 slc6a1a (ENSGMOG00000002873) #37 ENSGMOG00000002857 ENSGMOG00000002844 ENSGMOG00000002805 ENSGMOG00000002782 ENSGMOG00000002761 ENSGMOG00000002737 ENSGMOG00000036169 ENSGMOG00000024498 ENSGMOG00000002661 ENSGMOG00000002622 MTG2 (ENSGMOG00000002601) ENSGMOG00000027726 Protacanthopterygii ANCESTRAL SPECIES 37 ENSGT00940000158892.b.i.b ENSGT00940000164282.a ENSGT00940000168452 ENSGT00940000159597 ENSGT00940000154471.a.b.a.a.b.b ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00940000161980 ENSGT00940000164112.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000158273 #28 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.A ENSGT00940000157262.m.b ENSGT00940000156030.j ENSGT00940000166256 ENSGT00390000001787 ENSGT00940000156490.b.a ENSGT00940000163813 ENSGT00390000005939.a.b.a ENSGT00940000165182.c ENSGT00940000161589 ENSGT00940000155218.A.d Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 50 ENSGT00940000164282.a.b ENSGT00940000168452.a ENSGT00940000159597.c ENSGT00940000154471.a.b.a.a.b.b.c ENSGT00940000158284.vb.a ENSGT00940000164549.a.a.c ENSGT00940000162955 ENSGT00940000158523.c.a.d ENSGT00940000156047.b.c ENSGT00390000009491.d.o ENSGT00940000156915.f.a.c ENSGT00530000064244.a ENSGT00940000164112.a.k.a ENSGT00950000183041.A.a.b.a ENSGT00940000156084.a.a #22 ENSGT00940000158273.m.a #28 ENSGT00940000156062.n.c #30 ENSGT00390000003282.B.e.a #32 ENSGT00940000156027.a.e #37 ENSGT00940000153541.A.d ENSGT00940000157262.m.b.a ENSGT00990000211061 ENSGT00940000156490.b.a.c ENSGT00940000163813.k ENSGT00390000005939.a.b.a.a ENSGT00940000161589.q ENSGT00940000155218.A.d ENSGT00740000116961.a ENSGT00940000157379.l.a ENSGT00940000159853.c Huchen MODERN SPECIES 40 ENSHHUG00000025886 ENSHHUG00000025931 ENSHHUG00000025934 FGD3 (ENSHHUG00000025935) BICD2 (ENSHHUG00000025955) adtrp1 (ENSHHUG00000026055) ENSHHUG00000026056 zgc:171857 (ENSHHUG00000026065) WNT7A (ENSHHUG00000026069) FBLN2 (ENSHHUG00000026083) NUP210 (ENSHHUG00000026120) IQSEC1 (ENSHHUG00000026204) ENSHHUG00000026285 ENSHHUG00000026288 cnbpa (ENSHHUG00000026294) RAF1 (ENSHHUG00000026305) #22 ENSHHUG00000026529 #28 syn2a (ENSHHUG00000026539) #30 VGLL4 (ENSHHUG00000026623) #32 slc6a1a (ENSHHUG00000026636) #37 ENSHHUG00000026660 DUSP7 (ENSHHUG00000026672) ENSHHUG00000026685 ENSHHUG00000026690 bmp7b (ENSHHUG00000026697) irf10 (ENSHHUG00000026748) ENSHHUG00000026764 Salmoninae_a ANCESTRAL SPECIES 15 ENSGT00940000164282.a.b ENSGT00940000168452.a ENSGT00940000159597.c ENSGT00940000154471.a.b.a.a.b.b.c ENSGT00940000158284.vb.a ENSGT00940000164549.a.a.c ENSGT00940000162955 ENSGT00940000158523.c.a.d ENSGT00940000156047.b.c ENSGT00390000009491.d.o ENSGT00940000156915.f.a.c ENSGT00530000064244.a ENSGT00940000164112.a.k.a ENSGT00950000183041.A.a.b.a ENSGT00940000156084.a.a #22 ENSGT00940000158273.m.a #28 ENSGT00940000156062.n.c #30 ENSGT00390000003282.B.e.a #32 ENSGT00940000156027.a.e #37 ENSGT00940000153541.A.d ENSGT00940000157262.m.b.a ENSGT00990000211061 ENSGT00940000156490.b.a.c ENSGT00940000163813.k ENSGT00390000005939.a.b.a.a ENSGT00940000161589.q ENSGT00940000155218.A.d ENSGT00740000116961.a ENSGT00940000157379.l.a ENSGT00940000159853.c Salmo ANCESTRAL SPECIES 39 ENSGT00940000158963.b.b.c ENSGT00940000164282.a.b ENSGT00940000168452.a ENSGT00940000159597.c ENSGT00940000154471.a.b.a.a.b.b.c ENSGT00940000158284.vb.a ENSGT00940000164549.a.a.c ENSGT00940000162955 ENSGT00940000158523.c.a.d ENSGT00940000156047.b.c ENSGT00390000009491.d.o ENSGT00940000156915.f.a.c ENSGT00530000064244.a ENSGT00940000164112.a.k.a ENSGT00950000183041.A.a.b.a ENSGT00940000156084.a.a #22 ENSGT00940000158273.m.a #28 ENSGT00940000156062.n.c #30 ENSGT00390000003282.B.e.a #32 ENSGT00940000156027.a.e #37 ENSGT00940000153541.A.d ENSGT00940000157262.m.b.a ENSGT00990000211061 ENSGT00940000156490.b.a.c ENSGT00940000163813.k ENSGT00390000005939.a.b.a.a ENSGT00940000161589.q ENSGT00940000155218.A.d ENSGT00740000116961.a ENSGT00940000157379.l.a ENSGT00940000159853.c Atlantic salmon MODERN SPECIES 6 ENSSSAG00000116165 ENSSSAG00000006838 ENSSSAG00000006841 ENSSSAG00000006851 ENSSSAG00000006906 ENSSSAG00000108729 ENSSSAG00000094839 fbxw12 (ENSSSAG00000007336) ENSSSAG00000007323 WNT7A (ENSSSAG00000083105) FBLN2 (ENSSSAG00000007361) NUP210 (ENSSSAG00000007421) IQSEC1 (ENSSSAG00000007667) ENSSSAG00000104725 cnbpa (ENSSSAG00000007968) ENSSSAG00000014280 #22 ENSSSAG00000087293 ENSSSAG00000007991 #28 syn2a (ENSSSAG00000008160) #30 ENSSSAG00000089027 #32 slc6a1a (ENSSSAG00000034299) #37 TNNC1 (ENSSSAG00000036263) DUS7 (ENSSSAG00000036380) ENSSSAG00000036866 ENSSSAG00000037152 ENSSSAG00000037663 ENSSSAG00000038413 ENSSSAG00000038288 ENSSSAG00000038989 ENSSSAG00000040049 ENSSSAG00000105660 River trout MODERN SPECIES 20 ENSSTUG00000017139 ENSSTUG00000017155 ENSSTUG00000017162 FGD3 (ENSSTUG00000017176) BICD2 (ENSSTUG00000017276) adtrp1 (ENSSTUG00000017392) ENSSTUG00000017399 zgc:171857 (ENSSTUG00000017428) WNT7A (ENSSTUG00000017462) FBLN2 (ENSSTUG00000017495) NUP210 (ENSSTUG00000017715) IQSEC1 (ENSSTUG00000018328) ENSSTUG00000018632 ENSSTUG00000018649 cnbpa (ENSSTUG00000018687) RAF1 (ENSSTUG00000018748) #22 ENSSTUG00000019571 #28 syn2a (ENSSTUG00000019732) #30 VGLL4 (ENSSTUG00000023195) #32 slc6a1a (ENSSTUG00000023232) #37 ENSSTUG00000023300 DUSP7 (ENSSTUG00000023320) ENSSTUG00000023348 ENSSTUG00000023360 bmp7b (ENSSTUG00000023390) irf10 (ENSSTUG00000023405) ENSSTUG00000023429 ENSSTUG00000023432 ENSSTUG00000023444 ENSSTUG00000023470 ENSSTUG00000023533 Oncorhynchus ANCESTRAL SPECIES 5 ENSGT00940000164282.a.b ENSGT00940000168452.a ENSGT00940000159597.c ENSGT00940000154471.a.b.a.a.b.b.c ENSGT00940000158284.vb.a ENSGT00940000164549.a.a.c ENSGT00940000162955 ENSGT00940000158523.c.a.d ENSGT00940000156047.b.c ENSGT00390000009491.d.o ENSGT00940000156915.f.a.c ENSGT00530000064244.a ENSGT00940000164112.a.k.a ENSGT00950000183041.A.a.b.a ENSGT00940000156084.a.a #22 ENSGT00940000158273.m.a #28 ENSGT00940000156062.n.c #30 ENSGT00390000003282.B.e.a #32 ENSGT00940000156027.a.e #37 ENSGT00940000153541.A.d ENSGT00940000157262.m.b.a ENSGT00940000156490.b.a.c ENSGT00940000163813.k ENSGT00390000005939.a.b.a.a ENSGT00940000161589.q ENSGT00940000155218.A.d ENSGT00940000157379.l.a ENSGT00940000159853.c ENSGT00940000167759 ENSGT00390000011620.a.a.b.f.a Rainbow trout MODERN SPECIES 30 ENSOMYG00000050491 ENSOMYG00000034229 ENSOMYG00000074233 ENSOMYG00000062080 adtrp1 (ENSOMYG00000035665) ENSOMYG00000035675 ENSOMYG00000064867 zgc:171857 (ENSOMYG00000035689) WNT7A (ENSOMYG00000068194) FBLN2 (ENSOMYG00000035747) NUP210 (ENSOMYG00000036054) IQSEC1 (ENSOMYG00000060750) ENSOMYG00000036987 ENSOMYG00000036991 cnbpa (ENSOMYG00000037003) ENSOMYG00000037086 #22 ENSOMYG00000037258 #28 syn2a (ENSOMYG00000037514) #30 ENSOMYG00000038214 #32 slc6a1a (ENSOMYG00000038238) #37 ENSOMYG00000038279 ENSOMYG00000038290 ENSOMYG00000065416 ENSOMYG00000038340 ENSOMYG00000038325 ENSOMYG00000038360 ENSOMYG00000038389 MTG2 (ENSOMYG00000038412) SS18L1 (ENSOMYG00000038431) ENSOMYG00000056500 ENSOMYG00000038478 Oncorhynchus_a ANCESTRAL SPECIES 7 ENSGT00440000039084.a.a ENSGT00940000164282.a.b ENSGT00940000168452.a ENSGT00940000159597.c ENSGT00940000154471.a.b.a.a.b.b.c ENSGT00940000158284.vb.a ENSGT00940000164549.a.a.c ENSGT00940000162955 ENSGT00940000158523.c.a.d ENSGT00940000156047.b.c ENSGT00390000009491.d.o ENSGT00940000156915.f.a.c ENSGT00530000064244.a ENSGT00940000164112.a.k.a ENSGT00950000183041.A.a.b.a ENSGT00940000156084.a.a #22 ENSGT00940000158273.m.a #28 ENSGT00940000156062.n.c #30 ENSGT00390000003282.B.e.a #32 ENSGT00940000156027.a.e #37 ENSGT00940000153541.A.d ENSGT00940000157262.m.b.a ENSGT00940000156490.b.a.c ENSGT00940000163813.k ENSGT00390000005939.a.b.a.a ENSGT00940000161589.q ENSGT00940000155218.A.d ENSGT00740000116961.a ENSGT00940000159853.c ENSGT00940000167759 ENSGT00390000011620.a.a.b.f.a Coho salmon MODERN SPECIES 8 ciz1b (ENSOKIG00005038298) ENSOKIG00005038373 ENSOKIG00005038393 FGD3 (ENSOKIG00005038409) BICD2 (ENSOKIG00005038449) adtrp1 (ENSOKIG00005039240) ENSOKIG00005039280 zgc:171857 (ENSOKIG00005039294) WNT7A (ENSOKIG00005039363) FBLN2 (ENSOKIG00005039413) NUP210 (ENSOKIG00005040185) IQSEC1 (ENSOKIG00005004481) ENSOKIG00005005310 ENSOKIG00005005317 cnbpa (ENSOKIG00005005323) RAF1 (ENSOKIG00005005365) #22 ENSOKIG00005005487 ENSOKIG00005005496 #28 syn2a (ENSOKIG00005005639) #30 VGLL4 (ENSOKIG00005007344) #32 slc6a1a (ENSOKIG00005007368) #37 ENSOKIG00005007471 DUSP7 (ENSOKIG00005007491) ENSOKIG00005007514 bmp7b (ENSOKIG00005007536) ENSOKIG00005007548 ENSOKIG00005007564 ENSOKIG00005007571 ENSOKIG00005007612 ENSOKIG00005007634 ENSOKIG00005007653 Chinook salmon MODERN SPECIES 7 ENSOTSG00005007171 ciz1b (ENSOTSG00005007173) ENSOTSG00005007175 ENSOTSG00005007179 BICD2 (ENSOTSG00005007187) adtrp1 (ENSOTSG00005007201) ENSOTSG00005007202 zgc:171857 (ENSOTSG00005007203) WNT7A (ENSOTSG00005007204) FBLN2 (ENSOTSG00005007211) NUP210 (ENSOTSG00005008035) IQSEC1 (ENSOTSG00005008047) ENSOTSG00005011853 ENSOTSG00005011855 cnbpa (ENSOTSG00005011857) RAF1 (ENSOTSG00005011868) #22 ENSOTSG00005012312 #28 syn2a (ENSOTSG00005012320) #30 VGLL4 (ENSOTSG00005013268) #32 slc6a1a (ENSOTSG00005013270) #37 ENSOTSG00005013323 DUSP7 (ENSOTSG00005013327) bmp7b (ENSOTSG00005013340) irf10 (ENSOTSG00005013342) ENSOTSG00005013343 ENSOTSG00005013346 ENSOTSG00005013349 ENSOTSG00005013350 SS18L1 (ENSOTSG00005013352) PSMA7 (ENSOTSG00005013358) TAF4 (ENSOTSG00005013381) Salmoninae ANCESTRAL SPECIES 465 ENSGT00940000164112.a.k.b ENSGT00950000183041.A.a.b.b ENSGT00940000156084.a.b #22 ENSGT00940000158273.m.b #28 ENSGT00940000156062.n.d #30 ENSGT00390000003282.B.e.b #32 ENSGT00940000156027.a.f #37 ENSGT00940000153541.A.c ENSGT00940000157262.m.b.b ENSGT00940000156030.j.j ENSGT00390000001787 ENSGT00940000156490.b.a.d ENSGT00940000163813.l ENSGT00390000005939.a.b.a.b ENSGT00940000165182.c ENSGT00940000161589.r ENSGT00940000157379.l.b ENSGT00940000159853.d Huchen MODERN SPECIES 2089 ENSHHUG00000015000 cnbpa (ENSHHUG00000014966) RAF1 (ENSHHUG00000014935) #22 ENSHHUG00000014896 #28 syn2a (ENSHHUG00000014779) #30 VGLL4 (ENSHHUG00000014768) #32 slc6a1a (ENSHHUG00000014726) #37 ENSHHUG00000014715 DUSP7 (ENSHHUG00000014668) ENSHHUG00000014639 spo11 (ENSHHUG00000014597) Salmoninae_a ANCESTRAL SPECIES 26 ENSGT00940000157161.a.b.f.b ENSGT00940000158892.b.i.b ENSGT00940000164282.a.a ENSGT00940000168452.b ENSGT00940000159597.d ENSGT00940000154471.a.b.a.a.b.b.d ENSGT00940000158284.vb.b ENSGT00940000164549.a.a.d ENSGT00940000158523.c.a.c ENSGT00940000156047.b.d ENSGT00390000009491.d.p ENSGT00940000156915.f.a.d ENSGT00940000182532 ENSGT00940000164112.a.k.b ENSGT00950000183041.A.a.b.b ENSGT00940000156084.a.b #22 ENSGT00940000158273.m.b #28 ENSGT00940000156062.n.d #30 ENSGT00390000003282.B.e.b #32 ENSGT00940000156027.a.f #37 ENSGT00940000153541.A.c ENSGT00940000157262.m.b.b ENSGT00940000156030.j.j ENSGT00390000001787 ENSGT00940000156490.b.a.d ENSGT00940000163813.l ENSGT00390000005939.a.b.a.b ENSGT00940000165182.c ENSGT00940000161589.r ENSGT00740000116961.b ENSGT00940000157379.l.b Salmo ANCESTRAL SPECIES 4 ENSGT00940000157161.a.b.f.b ENSGT00940000158892.b.i.b ENSGT00940000164282.a.a ENSGT00940000168452.b ENSGT00940000159597.d ENSGT00940000154471.a.b.a.a.b.b.d ENSGT00940000158284.vb.b ENSGT00940000164549.a.a.d ENSGT00940000158523.c.a.c ENSGT00940000156047.b.d ENSGT00390000009491.d.p ENSGT00940000156915.f.a.d ENSGT00940000182532 ENSGT00940000164112.a.k.b ENSGT00950000183041.A.a.b.b ENSGT00940000156084.a.b #22 ENSGT00940000158273.m.b #28 ENSGT00940000156062.n.d #30 ENSGT00390000003282.B.e.b #32 ENSGT00940000156027.a.f #37 ENSGT00940000153541.A.c ENSGT00940000157262.m.b.b ENSGT00940000156030.j.j ENSGT00390000001787 ENSGT00940000156490.b.a.d ENSGT00940000163813.l ENSGT00390000005939.a.b.a.b ENSGT00940000161589.r ENSGT00740000116961.b ENSGT00940000157379.l.b ENSGT00940000159853.d Atlantic salmon MODERN SPECIES 4 ENSSSAG00000007436 ENSSSAG00000098234 ENSSSAG00000007466 SUSD3 (ENSSSAG00000007472) ENSSSAG00000007478 ENSSSAG00000086223 ENSSSAG00000007544 ENSSSAG00000119561 adtrp1 (ENSSSAG00000008678) ENSSSAG00000008699 WNT7A (ENSSSAG00000098279) FBLN2 (ENSSSAG00000008885) NUP210 (ENSSSAG00000009711) IQSEC1 (ENSSSAG00000010201) ENSSSAG00000007959 RAF1 (ENSSSAG00000087185) #22 ENSSSAG00000121239 ENSSSAG00000016562 #28 syn2a (ENSSSAG00000020439) #30 ENSSSAG00000043588 #32 slc6a1a (ENSSSAG00000043626) #37 ENSSSAG00000044930 ENSSSAG00000044955 ENSSSAG00000044979 ENSSSAG00000045416 ENSSSAG00000087720 ENSSSAG00000121498 ENSSSAG00000082434 ENSSSAG00000084801 ENSSSAG00000045657 y4629 (ENSSSAG00000045699) River trout MODERN SPECIES 23 ENSSTUG00000007260 FGD3 (ENSSTUG00000007217) BICD2 (ENSSTUG00000007170) adtrp1 (ENSSTUG00000007153) ENSSTUG00000007112 WNT7A (ENSSTUG00000007105) FBLN2 (ENSSTUG00000006286) NUP210 (ENSSTUG00000005830) ENSSTUG00000005811 ENSSTUG00000005806 ENSSTUG00000005797 IQSEC1 (ENSSTUG00000005479) ENSSTUG00000005421 ENSSTUG00000005313 cnbpa (ENSSTUG00000005293) RAF1 (ENSSTUG00000004779) #22 ENSSTUG00000004031 #28 VGLL4 (ENSSTUG00000003988) #32 slc6a1a (ENSSTUG00000003932) #37 ENSSTUG00000003897 DUSP7 (ENSSTUG00000003870) ENSSTUG00000003633 spo11 (ENSSTUG00000050338) bmp7b (ENSSTUG00000050322) irf10 (ENSSTUG00000050316) ENSSTUG00000050312 ENSSTUG00000050308 ENSSTUG00000050302 MTG2 (ENSSTUG00000050298) ENSSTUG00000050289 lsm14b (ENSSTUG00000050286) Oncorhynchus ANCESTRAL SPECIES 7 ENSGT00940000157794.n ENSGT00940000157161.a.b.f.b ENSGT00940000158892.b.i.b ENSGT00940000164282.a.a ENSGT00940000168452.b ENSGT00940000159597.d ENSGT00940000154471.a.b.a.a.b.b.d ENSGT00940000158284.vb.b ENSGT00940000164549.a.a.d ENSGT00940000158523.c.a.c ENSGT00940000156047.b.d ENSGT00390000009491.d.p ENSGT00940000156915.f.a.d ENSGT00940000164112.a.k.b ENSGT00950000183041.A.a.b.b ENSGT00940000156084.a.b #22 ENSGT00940000158273.m.b #28 ENSGT00940000156062.n.d #30 ENSGT00390000003282.B.e.b #32 ENSGT00940000156027.a.f #37 ENSGT00940000153541.A.c ENSGT00940000157262.m.b.b ENSGT00940000156030.j.j ENSGT00390000001787 ENSGT00940000156490.b.a.d ENSGT00940000163813.l ENSGT00390000005939.a.b.a.b ENSGT00940000165182.c ENSGT00940000161589.r ENSGT00740000116961.b ENSGT00940000157379.l.b Oncorhynchus_a ANCESTRAL SPECIES 9 ENSGT00940000157161.a.b.f.b ENSGT00940000158892.b.i.b ENSGT00940000164282.a.a ENSGT00940000168452.b ENSGT00940000159597.d ENSGT00940000154471.a.b.a.a.b.b.d ENSGT00940000158284.vb.b ENSGT00940000164549.a.a.d ENSGT00940000158523.c.a.c ENSGT00940000156047.b.d ENSGT00390000009491.d.p ENSGT01010000230178 ENSGT00940000182532 ENSGT00940000164112.a.k.b ENSGT00950000183041.A.a.b.b ENSGT00940000156084.a.b #22 ENSGT00940000158273.m.b #28 ENSGT00940000156062.n.d #30 ENSGT00390000003282.B.e.b #32 ENSGT00940000156027.a.f #37 ENSGT00940000153541.A.c ENSGT00940000157262.m.b.b ENSGT00940000156030.j.j ENSGT00390000001787 ENSGT00940000156490.b.a.d ENSGT00940000163813.l ENSGT00390000005939.a.b.a.b ENSGT00940000165182.c ENSGT00940000161589.r ENSGT00940000157379.l.b ENSGT00940000159853.d Coho salmon MODERN SPECIES 16 BRPF1 (ENSOKIG00005018645) ENSOKIG00005018461 ENSOKIG00005018415 ENSOKIG00005018389 ENSOKIG00005018373 ENSOKIG00005018316 BICD2 (ENSOKIG00005018238) adtrp1 (ENSOKIG00005018209) ENSOKIG00005018196 WNT7A (ENSOKIG00005018188) FBLN2 (ENSOKIG00005018076) ENSOKIG00005018060 IQSEC1 (ENSOKIG00005016202) ENSOKIG00005016060 cnbpa (ENSOKIG00005016035) RAF1 (ENSOKIG00005015922) #22 ENSOKIG00005015625 #28 syn2a (ENSOKIG00005014947) #30 VGLL4 (ENSOKIG00005014895) #32 slc6a1a (ENSOKIG00005014797) #37 ENSOKIG00005014774 DUSP7 (ENSOKIG00005014759) ENSOKIG00005014605 spo11 (ENSOKIG00005014331) BMP7 (ENSOKIG00005014314) irf10 (ENSOKIG00005014293) ENSOKIG00005014289 ENSOKIG00005014287 ENSOKIG00005014273 MTG2 (ENSOKIG00005014255) SS18L1 (ENSOKIG00005014201) Chinook salmon MODERN SPECIES 14 ENSOTSG00005028446 NINJ1 (ENSOTSG00005028445) ENSOTSG00005028443 ENSOTSG00005028442 FGD3 (ENSOTSG00005028439) BICD2 (ENSOTSG00005028126) adtrp1 (ENSOTSG00005028124) ENSOTSG00005028123 WNT7A (ENSOTSG00005028122) FBLN2 (ENSOTSG00005027937) ENSOTSG00005027935 ENSOTSG00005027864 ENSOTSG00005027840 ENSOTSG00005022303 cnbpa (ENSOTSG00005022302) RAF1 (ENSOTSG00005022232) #22 ENSOTSG00005022208 #28 syn2a (ENSOTSG00005020974) #30 VGLL4 (ENSOTSG00005020961) #32 slc6a1a (ENSOTSG00005020746) #37 ENSOTSG00005020742 DUSP7 (ENSOTSG00005020740) ENSOTSG00005020733 spo11 (ENSOTSG00005020236) ENSOTSG00005020007 ENSOTSG00005019961 tdg.1 (ENSOTSG00005019960) ENSOTSG00005019959 ENSOTSG00005019958 samm50 (ENSOTSG00005019536) api5 (ENSOTSG00005019535) Rainbow trout MODERN SPECIES 7 ENSOMYG00000061877 FGD3 (ENSOMYG00000032391) ENSOMYG00000032309 ENSOMYG00000064492 adtrp1 (ENSOMYG00000032253) ENSOMYG00000032247 ENSOMYG00000032239 ENSOMYG00000074569 ENSOMYG00000032219 ENSOMYG00000048445 ENSOMYG00000032197 ENSOMYG00000030335 ENSOMYG00000048424 ENSOMYG00000029739 cnbpa (ENSOMYG00000029713) ENSOMYG00000029550 #22 ENSOMYG00000029281 #28 ENSOMYG00000049529 syn2a (ENSOMYG00000029121) #30 ENSOMYG00000047222 #32 slc6a1a (ENSOMYG00000047213) #37 ENSOMYG00000047204 ENSOMYG00000047202 ENSOMYG00000047191 ENSOMYG00000047178 ENSOMYG00000047171 IRF10a (ENSOMYG00000047162) ENSOMYG00000047156 ENSOMYG00000047149 ENSOMYG00000072712 ENSOMYG00000064417 Salmoninae ANCESTRAL SPECIES 400 ENSGT00530000063168.a.a.a.f.a ENSGT00940000158148.e ENSGT00940000160218.i ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a.b ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00940000161980 ENSGT00940000164112.a.l ENSGT00390000014109 ENSGT00950000183041.A.a.a.a ENSGT00940000156084.b #22 ENSGT00950000183077.a.b.s #24 ENSGT00390000003839.b #25 ENSGT00390000003839.a #25 ENSGT00390000013266 #26 ENSGT00940000158273.n #28 Salmoninae_a ANCESTRAL SPECIES 78 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a.e ENSGT00940000158148.e ENSGT00940000160218.i ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a.a.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00940000161980 ENSGT00940000164112.a.l ENSGT00950000183041.A.a.a.a.b ENSGT00940000156084.b #22 ENSGT00950000183077.a.b.s #24 ENSGT00390000003839.b #25 ENSGT01030000235208 ENSGT00390000003839.a #25 ENSGT00390000013266 #26 ENSGT00940000158273.n #28 Salmo ANCESTRAL SPECIES 61 ENSGT01010000229826 ENSGT00950000183008.a.a.a.a ENSGT00530000063168.a.a.a.e ENSGT00940000158148.e ENSGT00940000160218.i ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000156047.a.b ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00390000008330 ENSGT00950000183014.f.b.a.b ENSGT00940000161980 ENSGT00940000164112.a.l ENSGT00950000183041.A.a.a.a.b ENSGT00940000156084.b #22 ENSGT00950000183077.a.b.s #24 ENSGT00390000003839.b #25 ENSGT01030000235208 ENSGT00390000013266 #26 ENSGT00940000158273.n #28 Atlantic salmon MODERN SPECIES 14 ENSSSAG00000121063 ENSSSAG00000083877 barx1 (ENSSSAG00000114886) ptpdc1a (ENSSSAG00000008674) ENSSSAG00000064612 FBLN2 (ENSSSAG00000008760) hdac11 (ENSSSAG00000008746) ENSSSAG00000121382 IQSEC1 (ENSSSAG00000009162) ENSSSAG00000008800 ENSSSAG00000091562 ENSSSAG00000008818 rab43 (ENSSSAG00000117714) zgc:77375 (ENSSSAG00000084248) ENSSSAG00000008850 raf1b (ENSSSAG00000015667) #22 mkrn2 (ENSSSAG00000028437) #24 mkrn2os (ENSSSAG00000028619) #25 tsen2 (ENSSSAG00000028772) #26 PPARG (ENSSSAG00000029040) #28 River trout MODERN SPECIES 7 ptpdc1a (ENSSTUG00000036105) ENSSTUG00000036095 wnt7aa (ENSSTUG00000036082) ENSSTUG00000035792 ENSSTUG00000035774 hdac11 (ENSSTUG00000035494) IQSEC1 (ENSSTUG00000035075) ENSSTUG00000035002 EFCC1 (ENSSTUG00000034995) ENSSTUG00000034980 ENSSTUG00000034976 ENSSTUG00000034973 rab43 (ENSSTUG00000034972) zgc:77375 (ENSSTUG00000034964) ENSSTUG00000034948 raf1b (ENSSTUG00000034296) #22 mkrn2 (ENSSTUG00000034245) #24 MKRN2OS (ENSSTUG00000034234) #25 ENSSTUG00000034229 tsen2 (ENSSTUG00000034204) #26 PPARG (ENSSTUG00000034013) #28 Northern pike DUPLICATION Northern pike MODERN SPECIES 11 BICD2 (ENSELUG00000018122) adtrp1 (ENSELUG00000018080) ENSELUG00000018054 zgc:171857 (ENSELUG00000018043) WNT7A (ENSELUG00000018032) FBLN2 (ENSELUG00000018004) NUP210 (ENSELUG00000017911) IQSEC1 (ENSELUG00000017810) ENSELUG00000017705 ENSELUG00000017694 ENSELUG00000017674 ENSELUG00000000702 ENSELUG00000017665 ENSELUG00000000698 cnbpa (ENSELUG00000017627) raf1a (ENSELUG00000017588) #22 ENSELUG00000017401 #28 syn2a (ENSELUG00000016963) #30 VGLL4 (ENSELUG00000016892) #32 slc6a1a (ENSELUG00000016865) #37 tnnc1 (ENSELUG00000024716) DUSP7 (ENSELUG00000016725) ENSELUG00000027063 spo11 (ENSELUG00000016656) ENSELUG00000016512 bmp7b (ENSELUG00000000624) irf10 (ENSELUG00000016496) ENSELUG00000024742 ENSELUG00000016476 ENSELUG00000028265 ENSELUG00000026495 Northern pike MODERN SPECIES 1 barx1 (ENSELUG00000013869) ptpdc1a (ENSELUG00000013847) wnt7aa (ENSELUG00000013813) FBLN2 (ENSELUG00000013779) ENSELUG00000030211 hdac11 (ENSELUG00000026940) IQSEC1 (ENSELUG00000013644) acad9 (ENSELUG00000013607) ENSELUG00000013547 ENSELUG00000013517 nuf2 (ENSELUG00000013487) rab43 (ENSELUG00000013468) zgc:77375 (ENSELUG00000013454) isy1 (ENSELUG00000000489) ENSELUG00000013402 raf1b (ENSELUG00000013381) #22 mkrn2 (ENSELUG00000013320) #24 ENSELUG00000013290 #25 MKRN2OS (ENSELUG00000013278) #25 tsen2 (ENSELUG00000013262) #26 PPARG (ENSELUG00000013192) #28 timp4.3 (ENSELUG00000028743) #29 syn2b (ENSELUG00000013135) Otomorpha ANCESTRAL SPECIES 29 ENSGT00390000004199 ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839.b #25 ENSGT00390000003839.a #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000167517 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B.f #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027.b #37 ENSGT00940000157569 ENSGT00940000166500 ENSGT00550000074921 Clupeiformes ANCESTRAL SPECIES 214 ENSGT00950000183041.A.a.a ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839.b #25 ENSGT00390000003839.a #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000167517 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B.f #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027.b #37 ENSGT00940000157569 ENSGT00940000166500 ENSGT00550000074921 Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 20 EPB41L1 (ENSCHAG00000022006) edn3b (ENSCHAG00000021996) ttll9 (ENSCHAG00000021869) ENSCHAG00000021858 ppp1r3da (ENSCHAG00000021849) phactr3a (ENSCHAG00000021830) PIGT (ENSCHAG00000021719) ENSCHAG00000021696 snx21 (ENSCHAG00000021688) srsf6a (ENSCHAG00000021645) NUP210 (ENSCHAG00000021425) FBLN2 (ENSCHAG00000020606) IQSEC1 (ENSCHAG00000019858) ENSCHAG00000019833 cnbpa (ENSCHAG00000019771) raf1a (ENSCHAG00000019289) #22 ENSCHAG00000019273 #28 syn2a (ENSCHAG00000019267) #30 VGLL4 (ENSCHAG00000019262) #32 slc6a1a (ENSCHAG00000019029) #37 ENSCHAG00000019015 DUSP7 (ENSCHAG00000019003) atp6ap1a (ENSCHAG00000018899) tafazzin (ENSCHAG00000018782) ENSCHAG00000018525 GDI1 (ENSCHAG00000018356) ITIH6 (ENSCHAG00000018239) ndnl2 (ENSCHAG00000018210) PFKFB1 (ENSCHAG00000016115) smc1al (ENSCHAG00000012525) ENSCHAG00000012432 Atlantic herring MODERN SPECIES 21 rad18 (ENSCHAG00000009480) oxtra (ENSCHAG00000009498) CAV3 (ENSCHAG00000009540) ENSCHAG00000009548 ENSCHAG00000009554 parp3 (ENSCHAG00000009559) GRM2 (ENSCHAG00000009645) tex264a (ENSCHAG00000009710) fancd2 (ENSCHAG00000009730) ENSCHAG00000010316 ENSCHAG00000010466 emc3 (ENSCHAG00000014853) tmem45b (ENSCHAG00000014956) gng8 (ENSCHAG00000014964) ENSCHAG00000014985 raf1b (ENSCHAG00000015158) #22 mkrn2 (ENSCHAG00000015498) #24 ENSCHAG00000015536 #25 MKRN2OS (ENSCHAG00000015545) #25 tsen2 (ENSCHAG00000015557) #26 PPARG (ENSCHAG00000015643) #28 syn2b (ENSCHAG00000015897) timp4.2 (ENSCHAG00000017406) #29 tamm41 (ENSCHAG00000017413) #31 vgll4b (ENSCHAG00000017431) #32 ATG7 (ENSCHAG00000017457) #33 HRH1 (ENSCHAG00000017743) #35 slc6a1b (ENSCHAG00000017782) #37 SLC6A11 (ENSCHAG00000018702) atp2b2 (ENSCHAG00000019399) iars1 (ENSCHAG00000019757) Denticle herring DUPLICATION Denticle herring MODERN SPECIES 1 ENSDCDG00000005219 ENSDCDG00000005220 ENSDCDG00000005224 ENSDCDG00000005229 ENSDCDG00000005334 lamb2 (ENSDCDG00000013139) USP19 (ENSDCDG00000022772) ENSDCDG00000027115 ENSDCDG00000027116 guca1b (ENSDCDG00000027117) FBLN2 (ENSDCDG00000027122) NUP210 (ENSDCDG00000027237) IQSEC1 (ENSDCDG00000027970) ENSDCDG00000028047 cnbpa (ENSDCDG00000028049) raf1a (ENSDCDG00000028058) #22 syn2a (ENSDCDG00000028170) #30 VGLL4 (ENSDCDG00000028538) #32 slc6a1a (ENSDCDG00000028568) #37 ENSDCDG00000029564 ENSDCDG00000029572 atp6ap1a (ENSDCDG00000029578) tafazzin (ENSDCDG00000029585) ENSDCDG00000029641 gdi1 (ENSDCDG00000029746) oard1 (ENSDCDG00000029775) apobec2b (ENSDCDG00000029776) ENSDCDG00000029778 ccdc115 (ENSDCDG00000029779) ebp (ENSDCDG00000029785) aar2 (ENSDCDG00000029802) Denticle herring MODERN SPECIES 3 vdrb (ENSDCDG00000026991) HDAC7 (ENSDCDG00000026829) ENSDCDG00000026821 slc48a1b (ENSDCDG00000026820) ITGA5 (ENSDCDG00000021357) bin2b (ENSDCDG00000021235) stk35l (ENSDCDG00000021227) GRM2 (ENSDCDG00000021222) tex264a (ENSDCDG00000021219) fancd2 (ENSDCDG00000020972) ENSDCDG00000020954 gpx1a (ENSDCDG00000020953) ENSDCDG00000016718 emc3 (ENSDCDG00000016651) ENSDCDG00000016645 raf1b (ENSDCDG00000016216) #22 mkrn2 (ENSDCDG00000016143) #24 ENSDCDG00000016138 #25 MKRN2OS (ENSDCDG00000016136) #25 tsen2 (ENSDCDG00000016127) #26 PPARG (ENSDCDG00000016087) #28 timp4.2 (ENSDCDG00000016082) #29 tamm41 (ENSDCDG00000016077) #31 syn2b (ENSDCDG00000035419) tamm41 (ENSDCDG00000035411) #31 vgll4b (ENSDCDG00000035408) #32 ATG7 (ENSDCDG00000035327) #33 HRH1 (ENSDCDG00000035297) #35 slc6a1b (ENSDCDG00000035164) #37 SLC6A11 (ENSDCDG00000035032) atp2b2 (ENSDCDG00000034974) Otophysi ANCESTRAL SPECIES 247 ENSGT00390000004199 ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839.b #25 ENSGT00390000003839.a #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000167517 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B.f #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027.b #37 ENSGT00940000157569 ENSGT00940000166500 ENSGT00550000074921 Characiphysae ANCESTRAL SPECIES 5 ENSGT00390000004860 ENSGT00390000011897 ENSGT00940000157238.a ENSGT00940000160986 ENSGT00940000157444 ENSGT00940000159941 ENSGT00390000010053 ENSGT00950000182952.C.g.b ENSGT00940000166455 ENSGT00940000166256 ENSGT00390000004199 ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839.b #25 ENSGT00390000003839.a #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000167517 ENSGT00940000156062.m #30 ENSGT00940000159798 #29 ENSGT00390000000616 #31 ENSGT00390000003282.B.f #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027.b #37 ENSGT00940000157569 ENSGT00940000166500 Channel catfish DUPLICATION Channel catfish MODERN SPECIES 6 Iqsec1 (ENSIPUG00000018899) ENSIPUG00000018890 cnbpa (ENSIPUG00000018873) RAF1 (ENSIPUG00000018733) #22 ENSIPUG00000017984 #28 ENSIPUG00000017936 Syn2 (ENSIPUG00000017901) #30 VGLL4 (ENSIPUG00000017868) #32 slc6a1a (ENSIPUG00000017842) #37 ENSIPUG00000017832 ATP6AP1 (ENSIPUG00000017801) tafazzin (ENSIPUG00000017688) ILRUN (ENSIPUG00000017672) SPDEF (ENSIPUG00000017654) ENSIPUG00000017644 pacsin1a (ENSIPUG00000017587) ENSIPUG00000017577 GDI1 (ENSIPUG00000017551) ENSIPUG00000017531 Channel catfish MODERN SPECIES 13 nol8 (ENSIPUG00000010933) cenpp (ENSIPUG00000010997) ogn (ENSIPUG00000011040) OMD (ENSIPUG00000011045) aspn (ENSIPUG00000011058) ecm2 (ENSIPUG00000011082) ippk (ENSIPUG00000011110) si:dkey-42i9.4 (ENSIPUG00000011123) atrip (ENSIPUG00000011138) shisa5 (ENSIPUG00000011229) nuf2 (ENSIPUG00000011256) RAB43 (ENSIPUG00000011323) zgc:77375 (ENSIPUG00000011342) Isy1 (ENSIPUG00000011379) ENSIPUG00000011418 raf1 (ENSIPUG00000011435) #22 mkrn2 (ENSIPUG00000011589) #24 ENSIPUG00000011635 #25 MKRN2OS (ENSIPUG00000011647) #25 tsen2 (ENSIPUG00000011651) #26 PPARG (ENSIPUG00000011668) #28 syn2 (ENSIPUG00000011716) timp4 (ENSIPUG00000011732) #29 tamm41 (ENSIPUG00000011765) #31 vgll4 (ENSIPUG00000011872) #32 atg7 (ENSIPUG00000011898) #33 hrh1 (ENSIPUG00000011966) #35 slc6a1 (ENSIPUG00000011974) #37 slc6a11 (ENSIPUG00000012021) atp2b2 (ENSIPUG00000012098) iars (ENSIPUG00000012333) Characiphysae_b ANCESTRAL SPECIES 77 ENSGT00950000183021.a.b.c ENSGT00390000005386.r ENSGT00390000008631.a.o.b ENSGT00940000155448.c.b ENSGT00940000159708 ENSGT00940000153776.a.b ENSGT00940000156091.a ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00940000156047.b ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.D ENSGT00940000157262.n ENSGT00940000156650.j ENSGT00390000018621 ENSGT00940000167069 ENSGT00950000182994.B.a.a.a.d.a ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00940000156478 ENSGT00940000161109.t ENSGT00940000164454 Electric eel DUPLICATION Electric eel MODERN SPECIES 54 smpd2a (ENSEEEG00000008916) ENSEEEG00000008917 arl6ip5b (ENSEEEG00000008919) srsf6a (ENSEEEG00000008920) L3MBTL1 (ENSEEEG00000008921) sgk2a (ENSEEEG00000008927) mybl2a (ENSEEEG00000008975) adtrp1 (ENSEEEG00000008976) zgc:171857 (ENSEEEG00000008977) WNT7A (ENSEEEG00000008978) FBLN2 (ENSEEEG00000008980) NUP210 (ENSEEEG00000008993) IQSEC1 (ENSEEEG00000009053) ENSEEEG00000009481 cnbpa (ENSEEEG00000009483) raf1a (ENSEEEG00000009503) #22 syn2a (ENSEEEG00000009732) #30 VGLL4 (ENSEEEG00000009744) #32 slc6a1a (ENSEEEG00000009746) #37 ENSEEEG00000009762 DUSP7 (ENSEEEG00000009828) atp6ap1a (ENSEEEG00000009833) tafazzin (ENSEEEG00000009836) ENSEEEG00000009841 gdi1 (ENSEEEG00000009844) pacsin1a (ENSEEEG00000009894) SPDEF (ENSEEEG00000009896) ILRUN (ENSEEEG00000009902) hm13 (ENSEEEG00000009908) ID1 (ENSEEEG00000009919) ENSEEEG00000009924 Electric eel MODERN SPECIES 237 ENSEEEG00000008064 ENSEEEG00000008068 ENSEEEG00000008069 cenpp (ENSEEEG00000008070) ogna (ENSEEEG00000008072) aspn (ENSEEEG00000008075) ECM2 (ENSEEEG00000008077) ippk (ENSEEEG00000008100) atrip (ENSEEEG00000008151) shisa10.1 (ENSEEEG00000008159) nuf2 (ENSEEEG00000008163) rab43 (ENSEEEG00000008168) zgc:77375 (ENSEEEG00000008170) isy1 (ENSEEEG00000008173) ENSEEEG00000008175 raf1b (ENSEEEG00000008185) #22 Characoidei ANCESTRAL SPECIES 38 ENSGT00390000011897 ENSGT00940000157238.a ENSGT00940000160986 ENSGT00940000157444 ENSGT00940000159941 ENSGT01030000235189 ENSGT00390000010053 ENSGT00950000182952.C.g.b ENSGT00940000166455 ENSGT00940000166256 ENSGT00390000004199 ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156084 #22 ENSGT00950000183077.a.b #24 ENSGT00390000003839.b #25 ENSGT00390000003839.a #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000167517 ENSGT00940000159798 #29 ENSGT00390000015124 ENSGT00390000016940.c.a.b ENSGT00940000158593.a ENSGT00950000183188.A.a.a ENSGT00940000159517 ENSGT00390000002944 ENSGT00940000166043 ENSGT00550000074921 Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 6 hm13 (ENSAMXG00000032438) ILRUN (ENSAMXG00000032528) SPDEF (ENSAMXG00000040721) pacsin1a (ENSAMXG00000036749) GDI1 (ENSAMXG00000009105) ENSAMXG00000039739 tafazzin (ENSAMXG00000043118) atp6ap1a (ENSAMXG00000009113) ENSAMXG00000035577 slc6a1a (ENSAMXG00000009126) #37 VGLL4 (ENSAMXG00000038300) #32 syn2a (ENSAMXG00000001126) #30 ENSAMXG00000043621 ENSAMXG00000041369 ENSAMXG00000043189 #28 raf1a (ENSAMXG00000001055) #22 ENSAMXG00000026018 cnbpa (ENSAMXG00000032363) IQSEC1 (ENSAMXG00000001027) NUP210 (ENSAMXG00000029488) ENSAMXG00000042741 ENSAMXG00000034327 WNT7A (ENSAMXG00000030245) zgc:171857 (ENSAMXG00000008861) ENSAMXG00000008851 adtrp1 (ENSAMXG00000029865) mybl2a (ENSAMXG00000008837) sgk2a (ENSAMXG00000008828) L3MBTL1 (ENSAMXG00000030188) srsf6a (ENSAMXG00000003101) ENSAMXG00000043112 Mexicana tetra MODERN SPECIES 14 cav4a (ENSAMXG00000006781) ENSAMXG00000032725 rrp9 (ENSAMXG00000006788) grm2b (ENSAMXG00000006790) ENSAMXG00000034242 ippk (ENSAMXG00000033401) ENSAMXG00000041795 si:dkey-42i9.4 (ENSAMXG00000005289) atrip (ENSAMXG00000005302) shisa10.1 (ENSAMXG00000039145) nuf2 (ENSAMXG00000005348) rab43 (ENSAMXG00000032172) zgc:77375 (ENSAMXG00000029468) isy1 (ENSAMXG00000005423) ENSAMXG00000005433 raf1b (ENSAMXG00000005440) #22 mkrn2 (ENSAMXG00000005535) #24 ENSAMXG00000038911 #25 MKRN2OS (ENSAMXG00000005712) #25 tsen2 (ENSAMXG00000043484) #26 PPARG (ENSAMXG00000043041) #28 syn2b (ENSAMXG00000032883) timp4.3 (ENSAMXG00000042051) #29 timeless (ENSAMXG00000005979) ENSAMXG00000036008 MMP19 (ENSAMXG00000006031) pmela (ENSAMXG00000006095) cdk2 (ENSAMXG00000030741) sarnp (ENSAMXG00000004834) gdf11 (ENSAMXG00000039058) iars1 (ENSAMXG00000036265) Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 55 BFAR (ENSPNAG00000005297) arl6ip5b (ENSPNAG00000023197) srsf6a (ENSPNAG00000023179) srsf6a (ENSPNAG00000023145) ENSPNAG00000023136 sgk2a (ENSPNAG00000023111) ENSPNAG00000023042 ENSPNAG00000023025 zgc:171857 (ENSPNAG00000023008) WNT7A (ENSPNAG00000022992) FBLN2 (ENSPNAG00000022977) NUP210 (ENSPNAG00000022954) IQSEC1 (ENSPNAG00000022682) ENSPNAG00000022440 cnbpa (ENSPNAG00000022431) raf1a (ENSPNAG00000022396) #22 ENSPNAG00000022259 #28 syn2a (ENSPNAG00000022244) #30 VGLL4 (ENSPNAG00000022221) #32 slc6a1a (ENSPNAG00000022190) #37 ENSPNAG00000022129 ENSPNAG00000022099 atp6ap1a (ENSPNAG00000022089) tafazzin (ENSPNAG00000022068) ENSPNAG00000022018 GDI1 (ENSPNAG00000021971) pacsin1a (ENSPNAG00000021909) Red-bellied piranha MODERN SPECIES 103 nol8 (ENSPNAG00000029992) ogna (ENSPNAG00000029996) OMD (ENSPNAG00000006585) aspn (ENSPNAG00000008046) ECM2 (ENSPNAG00000008055) cenpp (ENSPNAG00000000629) ippk (ENSPNAG00000008073) si:dkey-42i9.4 (ENSPNAG00000008076) atrip (ENSPNAG00000008094) shisa10.1 (ENSPNAG00000000671) nuf2 (ENSPNAG00000000683) rab43 (ENSPNAG00000000692) zgc:77375 (ENSPNAG00000008127) isy1 (ENSPNAG00000000703) ENSPNAG00000008143 raf1b (ENSPNAG00000008167) #22 mkrn2 (ENSPNAG00000008184) #24 ENSPNAG00000000758 #25 MKRN2OS (ENSPNAG00000008194) #25 tsen2 (ENSPNAG00000008203) #26 PPARG (ENSPNAG00000008214) #28 timp4.3 (ENSPNAG00000008221) #29 syn2b (ENSPNAG00000000793) timeless (ENSPNAG00000008298) ENSPNAG00000000887 MMP19 (ENSPNAG00000000896) pmela (ENSPNAG00000008382) cdk2 (ENSPNAG00000008407) sarnp (ENSPNAG00000000975) gdf11 (ENSPNAG00000008415) iars1 (ENSPNAG00000008441) Cyprinoidei ANCESTRAL SPECIES 83 ENSGT00510000046470.a.a.b ENSGT00390000008631.a.o.b ENSGT00940000155448.c.b ENSGT00940000159708 ENSGT00940000153776.a.b ENSGT00940000157709.j ENSGT00940000159342.b ENSGT00940000158284 ENSGT00940000164549.a.a ENSGT00940000162955 ENSGT00940000158523.c.a ENSGT00390000009491.d ENSGT00940000156915.f.a ENSGT00530000064244.a ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00940000156062.n #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a #37 ENSGT00940000153541.D ENSGT00940000156650.j ENSGT00390000018621 ENSGT00940000167069 ENSGT00940000164454 ENSGT00950000182835.c.c.g.a ENSGT00940000155614.i.a ENSGT00390000002821 ENSGT00940000161930 ENSGT00390000018730.A.e ENSGT00940000160902.c.b Zebrafish DUPLICATION Zebrafish DUPLICATION Zebrafish MODERN SPECIES 15 srsf6a (ENSDARG00000013729) ENSDARG00000095510 ENSDARG00000094801 L3MBTL1 (ENSDARG00000014828) sgk2a (ENSDARG00000063370) mybl2a (ENSDARG00000095241) adtrp1 (ENSDARG00000037810) ENSDARG00000058873 zgc:171857 (ENSDARG00000058871) WNT7A (ENSDARG00000002483) NUP210 (ENSDARG00000063333) IQSEC1 (ENSDARG00000073822) ENSDARG00000090638 cnbpa (ENSDARG00000045776) raf1a (ENSDARG00000096415) #22 ENSDARG00000102328 #22 syn2a (ENSDARG00000045945) #30 VGLL4 (ENSDARG00000094332) #32 slc6a1a (ENSDARG00000045944) #37 tnnc1a (ENSDARG00000011400) atp6ap1a (ENSDARG00000041417) tafazzin (ENSDARG00000041421) ngfa (ENSDARG00000058961) kcna2b (ENSDARG00000102064) etv7 (ENSDARG00000089434) ube2t (ENSDARG00000063285) zgc:194242 (ENSDARG00000079532) ENSDARG00000075295 TEAD3 (ENSDARG00000074321) smpd2a (ENSDARG00000040523) ENSDARG00000090598 Zebrafish MODERN SPECIES 15 arl6ip5b (ENSDARG00000016238) srsf6a (ENSDARG00000013729) ENSDARG00000095510 ENSDARG00000094801 L3MBTL1 (ENSDARG00000014828) sgk2a (ENSDARG00000063370) mybl2a (ENSDARG00000095241) adtrp1 (ENSDARG00000037810) ENSDARG00000058873 zgc:171857 (ENSDARG00000058871) WNT7A (ENSDARG00000002483) NUP210 (ENSDARG00000063333) IQSEC1 (ENSDARG00000073822) ENSDARG00000090638 cnbpa (ENSDARG00000045776) raf1a (ENSDARG00000096415) #22 ENSDARG00000102328 #22 syn2a (ENSDARG00000045945) #30 VGLL4 (ENSDARG00000094332) #32 slc6a1a (ENSDARG00000045944) #37 tnnc1a (ENSDARG00000011400) atp6ap1a (ENSDARG00000041417) tafazzin (ENSDARG00000041421) ngfa (ENSDARG00000058961) kcna2b (ENSDARG00000102064) etv7 (ENSDARG00000089434) ube2t (ENSDARG00000063285) zgc:194242 (ENSDARG00000079532) ENSDARG00000075295 TEAD3 (ENSDARG00000074321) smpd2a (ENSDARG00000040523) Zebrafish MODERN SPECIES 2 dusp7 (ENSDARG00000101413) alas1 (ENSDARG00000021059) npffl (ENSDARG00000045016) slc11a2 (ENSDARG00000024295) mettl1 (ENSDARG00000076518) POC1A (ENSDARG00000078533) cyp27b1 (ENSDARG00000045015) pdrg1 (ENSDARG00000045017) ENSDARG00000109591 znf831 (ENSDARG00000074906) nuf2 (ENSDARG00000034624) rab43 (ENSDARG00000059404) zgc:77375 (ENSDARG00000004282) isy1 (ENSDARG00000063466) cnbpb (ENSDARG00000070922) raf1b (ENSDARG00000059406) #22 ENSDARG00000105417 mkrn2 (ENSDARG00000007630) #24 ENSDARG00000086655 #25 MKRN2OS (ENSDARG00000100728) #25 tsen2 (ENSDARG00000091851) #26 pparg (ENSDARG00000031848) syn2b (ENSDARG00000101054) TIMP4 (ENSDARG00000111805) #29 timp4.2 (ENSDARG00000102617) #29 timp4.3 (ENSDARG00000100795) #29 vgll4b (ENSDARG00000103730) #32 tamm41 (ENSDARG00000100157) #31 ATG7 (ENSDARG00000102893) #33 slc6a1b (ENSDARG00000039647) #37 SLC6A11 (ENSDARG00000087981) Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 787 ENSGT00940000157804.l ENSGT00390000010265.b ENSGT00390000004199 ENSGT00950000183041.A.a.b.e.b ENSGT00940000156084.s.a #22 ENSGT00390000003839.b #25 ENSGT00390000003839.a #25 ENSGT00940000158273.a #28 ENSGT00940000167517.c Cyprininae_a ANCESTRAL SPECIES 535 ENSGT00940000157804.l ENSGT00390000010265.b ENSGT00390000010265.a ENSGT00940000155224.c.a ENSGT00390000004199 ENSGT00950000183041.A.a.b.e.b ENSGT00940000156084.s.a #22 ENSGT00390000003839.b #25 ENSGT00390000003839.a #25 ENSGT00940000158273.a #28 ENSGT00940000167517.c ENSGT00940000159798.h.a.a #29 ENSGT00940000159798.g.a.a #29 Golden-line barbel DUPLICATION Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 1558 RAB43 (ENSSGRG00000012301) isy1 (ENSSGRG00000012296) cnbpb (ENSSGRG00000012295) ENSSGRG00000012294 #22 ENSSGRG00000012293 #22 raf1b (ENSSGRG00000012292) #22 mkrn2 (ENSSGRG00000012291) #24 mkrn2 (ENSSGRG00000012290) #24 PPARG (ENSSGRG00000012207) #28 syn2b (ENSSGRG00000012203) TIMP4 (ENSSGRG00000012200) #29 ENSSGRG00000012199 #29 ENSSGRG00000012198 Golden-line barbel MODERN SPECIES 1558 RAB43 (ENSSGRG00000012301) isy1 (ENSSGRG00000012296) cnbpb (ENSSGRG00000012295) ENSSGRG00000012294 #22 ENSSGRG00000012293 #22 raf1b (ENSSGRG00000012292) #22 mkrn2 (ENSSGRG00000012291) #24 mkrn2 (ENSSGRG00000012290) #24 PPARG (ENSSGRG00000012207) #28 syn2b (ENSSGRG00000012203) TIMP4 (ENSSGRG00000012200) #29 ENSSGRG00000012199 #29 ENSSGRG00000012198 Golden-line barbel MODERN SPECIES 1558 RAB43 (ENSSGRG00000012301) isy1 (ENSSGRG00000012296) cnbpb (ENSSGRG00000012295) ENSSGRG00000012294 #22 ENSSGRG00000012293 #22 raf1b (ENSSGRG00000012292) #22 mkrn2 (ENSSGRG00000012291) #24 mkrn2 (ENSSGRG00000012290) #24 PPARG (ENSSGRG00000012207) #28 syn2b (ENSSGRG00000012203) TIMP4 (ENSSGRG00000012200) #29 ENSSGRG00000012199 #29 ENSSGRG00000012198 Cyprininae ANCESTRAL SPECIES 504 ENSGT00940000161980.i.a ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A.a.b.e.a ENSGT00940000156084.s.b #22 ENSGT00950000183077.a.b #24 ENSGT00390000013266 #26 ENSGT00940000158273.b #28 ENSGT00940000167517.d ENSGT00940000159798.h #29 ENSGT00940000159798.g #29 ENSGT00940000156062.m #30 ENSGT00390000003282.B.f.c #32 ENSGT00390000017509.a #33 ENSGT00390000000616 #31 ENSGT00390000003282.B.f.d #32 ENSGT00390000017509.b #33 ENSGT00940000160690 #35 ENSGT00940000156027.b.a #37 ENSGT00940000157569.l.a Cyprininae_a ANCESTRAL SPECIES 268 ENSGT00940000161980.i.a ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A.a.b.e.a ENSGT00940000156084.s.b #22 ENSGT00950000183077.a.b #24 ENSGT00390000013266 #26 ENSGT00940000158273.b #28 ENSGT00940000159798.h.b #29 ENSGT00940000167517.d ENSGT00940000159798.h.a.b #29 ENSGT00940000159798.g.b #29 ENSGT00390000000616 #31 ENSGT00390000003282.B.f.d.a #32 ENSGT00390000017509.b #33 ENSGT00940000160690 #35 ENSGT00940000157569.k ENSGT00940000166500.b ENSGT00550000074921.a ENSGT00390000007084.l Common carp reference MODERN SPECIES 42 ENSCCRG00000068236 ENSCCRG00000018170 mybl2b (ENSCCRG00000004062) ift52 (ENSCCRG00000038783) srsf6b (ENSCCRG00000073658) acot8 (ENSCCRG00000079671) phactr3b (ENSCCRG00000001436) ENSCCRG00000081475 pdrg1 (ENSCCRG00000025072) znf831 (ENSCCRG00000021373) rab43 (ENSCCRG00000023130) zgc:77375 (ENSCCRG00000078156) isy1 (ENSCCRG00000053267) cnbpb (ENSCCRG00000071758) raf1b (ENSCCRG00000029621) #22 mkrn2 (ENSCCRG00000029638) #24 tsen2 (ENSCCRG00000029639) #26 PPARG (ENSCCRG00000029641) #28 TIMP4 (ENSCCRG00000060473) #29 TIMP4 (ENSCCRG00000069980) #29 ENSCCRG00000039284 tamm41 (ENSCCRG00000036889) #31 VGLL4 (ENSCCRG00000039243) #32 ATG7 (ENSCCRG00000073737) #33 HRH1 (ENSCCRG00000082749) #35 ENSCCRG00000068512 ENSCCRG00000072366 ENSCCRG00000075579 slc6a1b (ENSCCRG00000016189) #37 SLC6A11 (ENSCCRG00000016659) Golden-line barbel MODERN SPECIES 919 rab43 (ENSSGRG00000035390) zgc:77375 (ENSSGRG00000035392) isy1 (ENSSGRG00000035398) cnbpb (ENSSGRG00000035512) raf1b (ENSSGRG00000035606) #22 mkrn2 (ENSSGRG00000036465) #24 ENSSGRG00000036467 ENSSGRG00000036468 #25 ENSSGRG00000036469 PPARG (ENSSGRG00000036484) #28 syn2b (ENSSGRG00000036635) TIMP4 (ENSSGRG00000036636) #29 TIMP4 (ENSSGRG00000036637) #29 tamm41 (ENSSGRG00000036638) #31 vgll4b (ENSSGRG00000036647) #32 ATG7 (ENSSGRG00000036655) #33 HRH1 (ENSSGRG00000036658) #35 Goldfish MODERN SPECIES 29 rap1ab (ENSCARG00000025079) PANK4 (ENSCARG00000024915) agtrap (ENSCARG00000024891) ctbs (ENSCARG00000024868) SPATA1 (ENSCARG00000024838) rpf1 (ENSCARG00000024311) uox (ENSCARG00000024219) samd13 (ENSCARG00000024207) prkacba (ENSCARG00000024140) ttll7 (ENSCARG00000024108) ENSCARG00000024104 rab43 (ENSCARG00000024098) zgc:77375 (ENSCARG00000024081) isy1 (ENSCARG00000024022) cnbpb (ENSCARG00000023990) raf1b (ENSCARG00000023947) #22 mkrn2 (ENSCARG00000023910) #24 tsen2 (ENSCARG00000023895) #26 PPARG (ENSCARG00000023697) #28 TIMP4 (ENSCARG00000023678) #29 syn2b (ENSCARG00000022229) tamm41 (ENSCARG00000022168) #31 vgll4b (ENSCARG00000022145) #32 ATG7 (ENSCARG00000021718) #33 HRH1 (ENSCARG00000021671) #35 avil (ENSCARG00000021483) SLC11A2 (ENSCARG00000021353) npffl (ENSCARG00000021332) ENSCARG00000021318 ENSCARG00000021306 ENSCARG00000021300 Cyprininae ANCESTRAL SPECIES 529 ENSGT00510000046470.a.a.b.a ENSGT00390000008631.a.o.b ENSGT00940000155448.c.b.d ENSGT00940000159708 ENSGT00940000153776.a.b ENSGT00940000164549.a.a.b.a ENSGT00940000162955.c ENSGT00940000158523.c.a.b ENSGT00940000156091.a ENSGT00940000164549.a.a.a ENSGT00940000162955.d ENSGT00940000158523.c.a.a ENSGT00390000009491.d.k ENSGT00940000156915.f.a.a ENSGT00940000182532 ENSGT00940000156084.t #22 ENSGT00940000156062.n.b #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a.b #37 ENSGT00940000153541.D.a Goldfish MODERN SPECIES 57 ENSCARG00000022414 samhd1 (ENSCARG00000022425) hm13 (ENSCARG00000022451) col9a3 (ENSCARG00000022858) ogfr (ENSCARG00000022882) MTG2 (ENSCARG00000022892) ENSCARG00000022902 NUP210 (ENSCARG00000022906) IQSEC1 (ENSCARG00000022953) ENSCARG00000023007 ENSCARG00000023008 ENSCARG00000023009 cnbpa (ENSCARG00000023017) raf1a (ENSCARG00000023115) #22 syn2a (ENSCARG00000025554) #30 prdm5 (ENSCARG00000025578) ndnf (ENSCARG00000025663) CPEB2 (ENSCARG00000025691) ENSCARG00000026334 PLEKHG1 (ENSCARG00000026347) tcp1 (ENSCARG00000026367) ENSCARG00000026478 snai1b (ENSCARG00000026486) ENSCARG00000026503 GGT7 (ENSCARG00000026523) NCOA6 (ENSCARG00000026591) ENSCARG00000026627 plcg1 (ENSCARG00000026709) zhx3b (ENSCARG00000028175) Cyprininae_a ANCESTRAL SPECIES 610 ENSGT01030000234583.a.a.c.b.a.a.a.b.b.a.a.a.a.a.a.b ENSGT00390000009491.d.l ENSGT00940000156915.f.a.b ENSGT00530000064244.a ENSGT00950000183041.A.a.b.f.b ENSGT00940000156084.t #22 ENSGT00940000156062.n.b #30 ENSGT00390000003282.B.e #32 ENSGT00940000156027.a.b #37 Common carp reference MODERN SPECIES 11 aar2 (ENSCCRG00000073612) zgc:113278 (ENSCCRG00000072829) ENSCCRG00000013582 ENSCCRG00000073134 sgk2a (ENSCCRG00000030012) ENSCCRG00000054965 mybl2a (ENSCCRG00000062825) ENSCCRG00000013508 ENSCCRG00000070198 zgc:171857 (ENSCCRG00000013502) ENSCCRG00000054024 ENSCCRG00000004465 IQSEC1 (ENSCCRG00000020031) ENSCCRG00000028448 cnbpa (ENSCCRG00000028039) raf1a (ENSCCRG00000028114) #22 syn2a (ENSCCRG00000053383) #30 ENSCCRG00000064445 #32 slc6a1a (ENSCCRG00000060481) #37 ENSCCRG00000067481 tnnc1a (ENSCCRG00000050469) ENSCCRG00000070511 ENSCCRG00000068315 ENSCCRG00000028383 ENSCCRG00000055517 ENSCCRG00000033530 ENSCCRG00000076156 ENSCCRG00000072841 ENSCCRG00000028042 ENSCCRG00000057479 ENSCCRG00000073987 Golden-line barbel MODERN SPECIES 544 ndnl2 (ENSSGRG00000046750) aar2 (ENSSGRG00000046752) zgc:113278 (ENSSGRG00000046757) arl6ip5b (ENSSGRG00000046904) srsf6a (ENSSGRG00000046905) L3MBTL1 (ENSSGRG00000046907) ENSSGRG00000046909 adtrp1 (ENSSGRG00000046960) ENSSGRG00000046961 zgc:171857 (ENSSGRG00000046962) WNT7A (ENSSGRG00000046963) NUP210 (ENSSGRG00000046975) IQSEC1 (ENSSGRG00000047089) ENSSGRG00000047239 cnbpa (ENSSGRG00000047240) raf1a (ENSSGRG00000047253) #22 syn2a (ENSSGRG00000047285) #30 ENSSGRG00000047338 #32 ENSSGRG00000047339 ENSSGRG00000047340 ENSSGRG00000047342 ENSSGRG00000047345 ENSSGRG00000047349 ENSSGRG00000047354 Osteoglossiformes ANCESTRAL SPECIES 57 ENSGT00940000160218.f ENSGT00940000164549.a.b ENSGT00940000158523.c.b ENSGT00940000158523.d ENSGT00940000156047.a ENSGT00940000156308 ENSGT00940000156915.f.b ENSGT00940000157312 ENSGT00390000008330 ENSGT00940000163561 ENSGT00390000004199 ENSGT00940000161980 ENSGT00940000164112.a ENSGT00390000014109 ENSGT00950000183041.A.a.b ENSGT00940000156084 #22 ENSGT00950000183077.a.b.p #24 ENSGT00390000003839.b #25 ENSGT00390000003839.a #25 ENSGT00390000013266 #26 ENSGT00940000158273 #28 ENSGT00940000159798.b #29 ENSGT00940000156062.m #30 ENSGT00940000159798.a.b #29 ENSGT00390000000616 #31 ENSGT00390000003282.B.f #32 ENSGT00390000017509 #33 ENSGT00940000160690 #35 ENSGT00940000156027.b #37 ENSGT00940000157569 ENSGT00940000166500.k Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES ttll9 (ENSSFOG00015032669) ttll9 (ENSSFOG00015015729) ENSSFOG00015015686 adtrp1 (ENSSFOG00015027701) PHF2 (ENSSFOG00015015603) BARX1 (ENSSFOG00015015595) ENSSFOG00015015566 zgc:171857 (ENSSFOG00015015537) WNT7A (ENSSFOG00015031761) NUP210 (ENSSFOG00015015318) IQSEC1 (ENSSFOG00015014520) ENSSFOG00015028833 ENSSFOG00015014402 zgc:77375 (ENSSFOG00015014380) cnbpa (ENSSFOG00015014361) raf1a (ENSSFOG00015014237) #22 syn2a (ENSSFOG00015013839) #30 TIMP4 (ENSSFOG00015029944) #29 VGLL4 (ENSSFOG00015028466) #32 slc6a1a (ENSSFOG00015013739) #37 DUSP7 (ENSSFOG00015027406) ALAS1 (ENSSFOG00015013574) IPPK (ENSSFOG00015013541) stab1 (ENSSFOG00015013421) ENSSFOG00015013402 kctd6b (ENSSFOG00015025544) slmapa (ENSSFOG00015013304) ENSSFOG00015013285 ENSSFOG00015013262 ENSSFOG00015013245 IP6K1 (ENSSFOG00015013241) Asian bonytongue MODERN SPECIES 14 barx1 (ENSSFOG00015031658) ptpdc1a (ENSSFOG00015014883) WNT7A (ENSSFOG00015014849) FBLN2 (ENSSFOG00015014730) hdac11 (ENSSFOG00015025218) ENSSFOG00015024488 IQSEC1 (ENSSFOG00015014615) acad9 (ENSSFOG00015000925) ENSSFOG00015000944 ENSSFOG00015000953 nuf2 (ENSSFOG00015001011) rab43 (ENSSFOG00015032863) ENSSFOG00015001099 isy1 (ENSSFOG00015001127) cnbpb (ENSSFOG00015031332) raf1b (ENSSFOG00015001166) #22 mkrn2 (ENSSFOG00015001191) #24 ENSSFOG00015001244 ENSSFOG00015001275 tsen2 (ENSSFOG00015001309) #26 ENSSFOG00015001374 PPARG (ENSSFOG00015001328) #28 TIMP4 (ENSSFOG00015029651) #29 SYN2 (ENSSFOG00015001391) #30 tamm41 (ENSSFOG00015001457) #31 vgll4b (ENSSFOG00015027191) #32 ATG7 (ENSSFOG00015001550) #33 HRH1 (ENSSFOG00015001587) #35 slc6a1b (ENSSFOG00015001593) #37 SLC6A11 (ENSSFOG00015001655) atp2b2 (ENSSFOG00015001733) P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 77 PIGT (ENSPKIG00000018290) phactr3a (ENSPKIG00000018263) ENSPKIG00000018238 ttll9 (ENSPKIG00000018185) ENSPKIG00000018151 adtrp1 (ENSPKIG00000018124) PHF2 (ENSPKIG00000018055) BARX1 (ENSPKIG00000018006) zgc:171857 (ENSPKIG00000017983) WNT7A (ENSPKIG00000017955) NUP210 (ENSPKIG00000017842) IQSEC1 (ENSPKIG00000017703) ENSPKIG00000017636 zgc:77375 (ENSPKIG00000017599) cnbpa (ENSPKIG00000017562) raf1a (ENSPKIG00000017461) #22 TIMP4 (ENSPKIG00000017371) #29 syn2a (ENSPKIG00000017339) #30 VGLL4 (ENSPKIG00000017317) #32 slc6a1a (ENSPKIG00000017271) #37 ENSPKIG00000017158 DUSP7 (ENSPKIG00000017098) ALAS1 (ENSPKIG00000017065) zgc:56699 (ENSPKIG00000017039) nr4a1 (ENSPKIG00000017017) tamalin (ENSPKIG00000016990) dgkaa (ENSPKIG00000016878) RNF41 (ENSPKIG00000016797) SLC39A5 (ENSPKIG00000016771) ankrd52a (ENSPKIG00000016673) COQ10A (ENSPKIG00000016600) P. kingsleyae MODERN SPECIES 60 AVPR2 (ENSPKIG00000024364) ENSPKIG00000024382 TEAD3 (ENSPKIG00000024423) TULP1 (ENSPKIG00000024476) ENSPKIG00000024482 ENSPKIG00000024490 ENSPKIG00000024498 ENSPKIG00000024509 ENSPKIG00000024519 ENSPKIG00000024532 nuf2 (ENSPKIG00000024545) rab43 (ENSPKIG00000024563) ENSPKIG00000024576 isy1 (ENSPKIG00000024592) cnbpb (ENSPKIG00000024603) raf1b (ENSPKIG00000024636) #22 MKRN2 (ENSPKIG00000024724) #24 ENSPKIG00000024788 #25 MKRN2OS (ENSPKIG00000024791) #25 tsen2 (ENSPKIG00000024801) #26 PPARG (ENSPKIG00000024820) #28 SYN2 (ENSPKIG00000024841) #30 TIMP4 (ENSPKIG00000024854) #29 tamm41 (ENSPKIG00000024860) #31 vgll4b (ENSPKIG00000024872) #32 ATG7 (ENSPKIG00000024886) #33 HRH1 (ENSPKIG00000024898) #35 slc6a1b (ENSPKIG00000024901) #37 SLC6A11 (ENSPKIG00000024908) atp2b2 (ENSPKIG00000024938) ENSPKIG00000024988 Spotted gar MODERN SPECIES 671 FBLN2 (ENSLOCG00000014039) hdac11 (ENSLOCG00000014033) NUP210 (ENSLOCG00000014031) IQSEC1 (ENSLOCG00000014026) acad9 (ENSLOCG00000014020) ENSLOCG00000014017 ENSLOCG00000014014 GP9 (ENSLOCG00000018262) ENSLOCG00000018261 nuf2 (ENSLOCG00000014009) nuf2 (ENSLOCG00000014004) rab43 (ENSLOCG00000014001) zgc:77375 (ENSLOCG00000013994) isy1 (ENSLOCG00000013988) cnbpb (ENSLOCG00000013985) raf1b (ENSLOCG00000013974) #22 mkrn2 (ENSLOCG00000013970) #24 MKRN2OS (ENSLOCG00000013968) #25 tsen2 (ENSLOCG00000013958) #26 PPARG (ENSLOCG00000013954) #28 timp4.2 (ENSLOCG00000013951) #29 syn2a (ENSLOCG00000013941) #30 tamm41 (ENSLOCG00000013931) #31 vgll4b (ENSLOCG00000013927) #32 ATG7 (ENSLOCG00000013924) #33 HRH1 (ENSLOCG00000013921) #35 slc6a1a (ENSLOCG00000013915) #37 SLC6A11 (ENSLOCG00000013904) atp2b2 (ENSLOCG00000013890) iars1 (ENSLOCG00000013871) ENSLOCG00000013869 Reedfish MODERN SPECIES 9 FBLN2 (ENSECRG00000021236) hdac11 (ENSECRG00000021200) NUP210 (ENSECRG00000021120) NUP210 (ENSECRG00000021042) IQSEC1 (ENSECRG00000020985) acad9 (ENSECRG00000020941) ENSECRG00000020909 EFCC1 (ENSECRG00000020895) GP9 (ENSECRG00000020886) ENSECRG00000020870 nuf2 (ENSECRG00000020838) rab43 (ENSECRG00000020826) zgc:77375 (ENSECRG00000020811) isy1 (ENSECRG00000020784) cnbpb (ENSECRG00000020753) raf1b (ENSECRG00000020686) #22 mkrn2 (ENSECRG00000020646) #24 MKRN2OS (ENSECRG00000020632) #25 TSEN2 (ENSECRG00000020616) #26 PPARG (ENSECRG00000020604) #28 timp4.2 (ENSECRG00000020586) #29 syn2a (ENSECRG00000020574) #30 tamm41 (ENSECRG00000020546) #31 vgll4b (ENSECRG00000019720) #32 ATG7 (ENSECRG00000019598) #33 HRH1 (ENSECRG00000019568) #35 slc6a1a (ENSECRG00000019515) #37 SLC6A11 (ENSECRG00000019456) ENSECRG00000019113 ENSECRG00000019049 iars1 (ENSECRG00000019013) Elephant shark MODERN SPECIES 1592 ptpdc1a (ENSCMIG00000011412) wnt7aa (ENSCMIG00000011404) FBLN2 (ENSCMIG00000011392) hdac11 (ENSCMIG00000011388) NUP210 (ENSCMIG00000011053) IQSEC1 (ENSCMIG00000010972) acad9 (ENSCMIG00000010969) ENSCMIG00000010964 EFCC1 (ENSCMIG00000010962) ENSCMIG00000010960 ENSCMIG00000010954 rab43 (ENSCMIG00000010951) zgc:77375 (ENSCMIG00000010950) isy1 (ENSCMIG00000010938) cnbpb (ENSCMIG00000010936) raf1b (ENSCMIG00000010901) #22 mkrn2 (ENSCMIG00000010891) #24 mkrn2os (ENSCMIG00000010887) #25 tsen2 (ENSCMIG00000010886) #26 PPARG (ENSCMIG00000010883) #28 TIMP4 (ENSCMIG00000010881) #29 syn2a (ENSCMIG00000010866) #30