Murinae	ANCESTRAL SPECIES	35	ENSGT00940000155401.j	ENSGT00940000156564	ENSGT00940000155360.B #8	ENSGT00510000049560 #9	ENSGT00940000162479 #11	ENSGT00640000092035	ENSGT00390000018090 #13	ENSGT00940000157872 #14	ENSGT00940000157849 #15	ENSGT00940000157874 #16	ENSGT00940000154474.A #17	ENSGT00940000157694 #18	ENSGT00940000154505.A #19	ENSGT00390000001101 #20	ENSGT00940000156905 #21	ENSGT00950000182899.B.a #22	ENSGT00940000154927 #23	ENSGT00530000063627.a #24	ENSGT00940000157453 #25	ENSGT00390000001394 #26	ENSGT00940000154652 #27	ENSGT01030000234579.B.b #28	ENSGT00940000159927 #29	ENSGT00940000160889 #30	ENSGT00940000161271 #31	ENSGT00390000016480 #32	ENSGT00940000157953 #33	ENSGT00940000164099.a.a #34	ENSGT00950000182950.B #35	ENSGT00390000017146.b #36	ENSGT00730000111351 #37
Mus	ANCESTRAL SPECIES	6	ENSGT00940000156564	ENSGT00940000155360.B #8	ENSGT00510000049560 #9	ENSGT00860000135683 #10	ENSGT00940000162479 #11	ENSGT00900000143323.A #12	ENSGT00390000018090 #13	ENSGT00940000157872 #14	ENSGT00940000157849 #15	ENSGT00940000157874 #16	ENSGT00940000154474.A #17	ENSGT00940000157694 #18	ENSGT00940000154505.A #19	ENSGT00390000001101 #20	ENSGT00940000156905 #21	ENSGT00950000182899.B.a #22	ENSGT00940000154927 #23	ENSGT00530000063627.a #24	ENSGT00940000157453 #25	ENSGT00390000001394 #26	ENSGT00940000154652.i #27	ENSGT01030000234579.B.b #28	ENSGT00940000159927 #29	ENSGT00940000160889 #30	ENSGT00940000161271 #31	ENSGT00390000016480 #32	ENSGT00940000157953 #33	ENSGT01000000214655	ENSGT00940000164099.a.a #34	ENSGT00950000182950.B #35	ENSGT00390000017146.b #36
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000156564	ENSGT00940000155360.B #8	ENSGT00510000049560 #9	ENSGT00860000135683 #10	ENSGT00940000162479 #11	ENSGT00900000143323.A #12	ENSGT00390000018090 #13	ENSGT00940000157872 #14	ENSGT00940000157849 #15	ENSGT00940000157874 #16	ENSGT00940000154474.A #17	ENSGT00940000157694 #18	ENSGT00940000154505.A #19	ENSGT00390000001101 #20	ENSGT00940000156905 #21	ENSGT00950000182899.B.a #22	ENSGT00940000154927 #23	ENSGT00530000063627.a #24	ENSGT00940000157453 #25	ENSGT00390000001394 #26	ENSGT00940000154652.i #27	ENSGT01030000234579.B.b #28	ENSGT00940000159927 #29	ENSGT00940000160889 #30	ENSGT00940000161271 #31	ENSGT00390000016480 #32	ENSGT00940000157953 #33	ENSGT00940000164099.a.a #34	ENSGT00950000182950.B #35	ENSGT00390000017146.b #36	ENSGT00730000111351 #37
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000156564	ENSGT00940000155360.B #8	ENSGT00510000049560 #9	ENSGT00860000135683 #10	ENSGT00940000162479 #11	ENSGT00900000143323.A #12	ENSGT00390000018090 #13	ENSGT00940000157872 #14	ENSGT00940000157849 #15	ENSGT00940000157874 #16	ENSGT00940000154474.A #17	ENSGT00940000157694 #18	ENSGT00940000154505.A #19	ENSGT00390000001101 #20	ENSGT00940000156905 #21	ENSGT00950000182899.B.a #22	ENSGT00940000154927 #23	ENSGT00530000063627.a #24	ENSGT00940000157453 #25	ENSGT00390000001394 #26	ENSGT00940000154652.i #27	ENSGT01030000234579.B.b #28	ENSGT00940000159927 #29	ENSGT00940000160889 #30	ENSGT00940000161271 #31	ENSGT00390000016480 #32	ENSGT00940000157953 #33	ENSGT00940000164099.a.a #34	ENSGT00950000182950.B #35	ENSGT00390000017146.b #36	ENSGT00730000111351 #37
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000156564	ENSGT00940000155360.B #8	ENSGT00510000049560 #9	ENSGT00860000135683 #10	ENSGT00940000162479 #11	ENSGT00900000143323.A #12	ENSGT00390000018090 #13	ENSGT00940000157872 #14	ENSGT00940000157849 #15	ENSGT00940000157874 #16	ENSGT00940000154474.A #17	ENSGT00940000157694 #18	ENSGT00940000154505.A #19	ENSGT00390000001101 #20	ENSGT00940000156905 #21	ENSGT00950000182899.B.a #22	ENSGT00940000154927 #23	ENSGT00530000063627.a #24	ENSGT00940000157453 #25	ENSGT00390000001394 #26	ENSGT00940000154652.i #27	ENSGT01030000234579.B.b #28	ENSGT00940000159927 #29	ENSGT00940000160889 #30	ENSGT00940000161271 #31	ENSGT00390000016480 #32	ENSGT00940000157953 #33	ENSGT00940000164099.a.a #34	ENSGT00950000182950.B #35	ENSGT00390000017146.b #36	ENSGT00730000111351 #37
spretus	MODERN SPECIES	17	Spaca7b (MGP_SPRETEiJ_G0031929) #7	Arhgef7 (MGP_SPRETEiJ_G0031930) #8	Tex29 (MGP_SPRETEiJ_G0031931) #9	MGP_SPRETEiJ_G0031932 #10	Sox1 (MGP_SPRETEiJ_G0031933) #11	MGP_SPRETEiJ_G0031934 #12	Spaca7 (MGP_SPRETEiJ_G0031935) #13	Tubgcp3 (MGP_SPRETEiJ_G0031936) #14	Atp11a (MGP_SPRETEiJ_G0031937) #15	Mcf2l (MGP_SPRETEiJ_G0031938) #16	F7 (MGP_SPRETEiJ_G0031939) #17	F10 (MGP_SPRETEiJ_G0031940) #18	Proz (MGP_SPRETEiJ_G0031941) #19	Pcid2 (MGP_SPRETEiJ_G0031942) #20	Cul4a (MGP_SPRETEiJ_G0031943) #21	Lamp1 (MGP_SPRETEiJ_G0031944) #22	Grtp1 (MGP_SPRETEiJ_G0031945) #23	Adprhl1 (MGP_SPRETEiJ_G0031946) #24	Dcun1d2 (MGP_SPRETEiJ_G0031947) #25	Tmco3 (MGP_SPRETEiJ_G0031948) #26	Tfdp1 (MGP_SPRETEiJ_G0031949) #27	Atp4b (MGP_SPRETEiJ_G0031950) #28	Grk1 (MGP_SPRETEiJ_G0031951) #29	Tmem255b (MGP_SPRETEiJ_G0031952) #30	Gas6 (MGP_SPRETEiJ_G0031953) #31	1700029H14Rik (MGP_SPRETEiJ_G0031954) #32	Rasa3 (MGP_SPRETEiJ_G0031955) #33	Cfap97d2 (MGP_SPRETEiJ_G0031956) #34	Cdc16 (MGP_SPRETEiJ_G0031957) #35	Upf3a (MGP_SPRETEiJ_G0031958) #36	Champ1 (MGP_SPRETEiJ_G0031959) #37
Steppe mouse	MODERN SPECIES	3344	Arhgef7 (ENSMSIG00000009198) #8	Tex29 (ENSMSIG00000009088) #9	ENSMSIG00000009060 #10	ENSMSIG00000009016	ENSMSIG00000009009 #12	Spaca7 (ENSMSIG00000008969) #13	ENSMSIG00000007709 #14	ENSMSIG00000007686	Atp11a (ENSMSIG00000007316) #15	Mcf2l (ENSMSIG00000006777) #16	F7 (ENSMSIG00000006688) #17	F10 (ENSMSIG00000006622) #18	ENSMSIG00000006611 #19	Pcid2 (ENSMSIG00000006579) #20	Cul4a (ENSMSIG00000006476) #21	Lamp1 (ENSMSIG00000006411) #22	Grtp1 (ENSMSIG00000006285) #23	Adprhl1 (ENSMSIG00000006243) #24	ENSMSIG00000006071 #25	Tmco3 (ENSMSIG00000006023) #26	ENSMSIG00000005980 #27	Atp4b (ENSMSIG00000005950) #28	Grk1 (ENSMSIG00000005917) #29	Tmem255b (ENSMSIG00000005845) #30	Gas6 (ENSMSIG00000005788) #31	1700029H14Rik (ENSMSIG00000005649) #32	Rasa3 (ENSMSIG00000005579) #33	Cfap97d2 (ENSMSIG00000005516) #34	Cdc16 (ENSMSIG00000005440) #35	Upf3a (ENSMSIG00000005401) #36
Mouse	MODERN SPECIES	17	Ing1 (ENSMUSG00000045969)	Ankrd10 (ENSMUSG00000031508)	Spaca7b (ENSMUSG00000031509) #13	Arhgef7 (ENSMUSG00000031511) #8	Tex29 (ENSMUSG00000031512) #9	Sox1 (ENSMUSG00000096014) #11	Spaca7 (ENSMUSG00000010435) #13	Tubgcp3 (ENSMUSG00000000759) #14	Atp11a (ENSMUSG00000031441) #15	Mcf2l (ENSMUSG00000031442) #16	F7 (ENSMUSG00000031443) #17	F10 (ENSMUSG00000031444) #18	Proz (ENSMUSG00000031445) #19	Pcid2 (ENSMUSG00000038542) #20	Cul4a (ENSMUSG00000031446) #21	Lamp1 (ENSMUSG00000031447) #22	Grtp1 (ENSMUSG00000038515) #23	Adprhl1 (ENSMUSG00000031448) #24	Dcun1d2 (ENSMUSG00000038506) #25	Tmco3 (ENSMUSG00000038497) #26	Tfdp1 (ENSMUSG00000038482) #27	Atp4b (ENSMUSG00000031449) #28	Grk1 (ENSMUSG00000031450) #29	Tmem255b (ENSMUSG00000038457) #30	Gas6 (ENSMUSG00000031451) #31	1700029H14Rik (ENSMUSG00000031452) #32	Rasa3 (ENSMUSG00000031453) #33	Cfap97d2 (ENSMUSG00000090336) #34	Cdc16 (ENSMUSG00000038416) #35	Upf3a (ENSMUSG00000038398) #36	Semp2l2a (ENSMUSG00000057116)
Ryukyu mouse	MODERN SPECIES	17	MGP_CAROLIEiJ_G0030820 #13	MGP_CAROLIEiJ_G0030821 #8	MGP_CAROLIEiJ_G0030822 #9	MGP_CAROLIEiJ_G0030823 #10	Sox1 (MGP_CAROLIEiJ_G0030824) #11	MGP_CAROLIEiJ_G0030825 #12	Spaca7 (MGP_CAROLIEiJ_G0030826) #13	MGP_CAROLIEiJ_G0030827	Atp11a (MGP_CAROLIEiJ_G0030828) #15	Mcf2l (MGP_CAROLIEiJ_G0030829) #16	F7 (MGP_CAROLIEiJ_G0030830) #17	MGP_CAROLIEiJ_G0030831 #18	Proz (MGP_CAROLIEiJ_G0030832) #19	Pcid2 (MGP_CAROLIEiJ_G0030833) #20	MGP_CAROLIEiJ_G0030834 #21	Lamp1 (MGP_CAROLIEiJ_G0030835) #22	Grtp1 (MGP_CAROLIEiJ_G0030836) #23	Adprhl1 (MGP_CAROLIEiJ_G0030837) #24	MGP_CAROLIEiJ_G0030838 #25	Tmco3 (MGP_CAROLIEiJ_G0030839) #26	Atp4b (MGP_CAROLIEiJ_G0030840) #28	MGP_CAROLIEiJ_G0030841 #29	Tmem255b (MGP_CAROLIEiJ_G0030842) #30	Gas6 (MGP_CAROLIEiJ_G0030843) #31	1700029H14Rik (MGP_CAROLIEiJ_G0030844) #32	Rasa3 (MGP_CAROLIEiJ_G0030845) #33	MGP_CAROLIEiJ_G0030846	Cdc16 (MGP_CAROLIEiJ_G0030847) #35	Upf3a (MGP_CAROLIEiJ_G0030848) #36	Champ1 (MGP_CAROLIEiJ_G0030849) #37	Coprs (MGP_CAROLIEiJ_G0030850)
Shrew mouse	MODERN SPECIES	10	Spaca7b (MGP_PahariEiJ_G0021282) #13	Arhgef7 (MGP_PahariEiJ_G0021283) #8	MGP_PahariEiJ_G0021284 #9	MGP_PahariEiJ_G0021285 #10	Sox1 (MGP_PahariEiJ_G0021286) #11	MGP_PahariEiJ_G0021287 #12	Spaca7 (MGP_PahariEiJ_G0021288) #13	Tubgcp3 (MGP_PahariEiJ_G0021289) #14	Atp11a (MGP_PahariEiJ_G0021290) #15	Mcf2l (MGP_PahariEiJ_G0021291) #16	F7 (MGP_PahariEiJ_G0021292) #17	F10 (MGP_PahariEiJ_G0021293) #18	Proz (MGP_PahariEiJ_G0021294) #19	Pcid2 (MGP_PahariEiJ_G0021295) #20	Cul4a (MGP_PahariEiJ_G0021296) #21	Lamp1 (MGP_PahariEiJ_G0021297) #22	Grtp1 (MGP_PahariEiJ_G0021298) #23	MGP_PahariEiJ_G0021299 #24	Dcun1d2 (MGP_PahariEiJ_G0021300) #25	Tmco3 (MGP_PahariEiJ_G0021301) #26	Tfdp1 (MGP_PahariEiJ_G0021302) #27	Atp4b (MGP_PahariEiJ_G0021303) #28	Grk1 (MGP_PahariEiJ_G0021304) #29	Tmem255b (MGP_PahariEiJ_G0021305) #30	Gas6 (MGP_PahariEiJ_G0021306) #31	1700029H14Rik (MGP_PahariEiJ_G0021307) #32	Rasa3 (MGP_PahariEiJ_G0021308) #33	MGP_PahariEiJ_G0021309	Cdc16 (MGP_PahariEiJ_G0021310) #35	Upf3a (MGP_PahariEiJ_G0021311) #36	Champ1 (MGP_PahariEiJ_G0021312) #37
Rat	MODERN SPECIES	7	AABR07026557.1 (ENSRNOG00000053136) #13	Arhgef7 (ENSRNOG00000012934) #8	Tex29 (ENSRNOG00000033585) #9	Sox1 (ENSRNOG00000064976) #11	LOC102553495 (ENSRNOG00000031681)	Spaca7 (ENSRNOG00000054006) #13	Tubgcp3 (ENSRNOG00000017085) #14	Atp11a (ENSRNOG00000017154) #15	Mcf2l (ENSRNOG00000028426) #16	F7 (ENSRNOG00000032737) #17	F10 (ENSRNOG00000033444) #18	Proz (ENSRNOG00000019700) #19	Pcid2 (ENSRNOG00000025222) #20	ENSRNOG00000064057	Cul4a (ENSRNOG00000019649) #21	Lamp1 (ENSRNOG00000019629) #22	Adprhl1 (ENSRNOG00000019504) #24	Dcun1d2 (ENSRNOG00000019473) #25	Tmco3 (ENSRNOG00000046973) #26	Tfdp1 (ENSRNOG00000019222) #27	Atp4b (ENSRNOG00000018543) #28	Grk1 (ENSRNOG00000018430) #29	Tmem255b (ENSRNOG00000026336) #30	Gas6 (ENSRNOG00000018233) #31	LOC290876 (ENSRNOG00000026740) #32	Rasa3 (ENSRNOG00000017671) #33	Cfap97d2 (ENSRNOG00000042867) #34	Cdc16 (ENSRNOG00000017536) #35	Upf3a (ENSRNOG00000017397) #36	Champ1 (ENSRNOG00000000112) #37	Coprs (ENSRNOG00000000111)