Theria	ANCESTRAL SPECIES	3	ENSGT00390000002049.c.a	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Eutheria	ANCESTRAL SPECIES		ENSGT00390000003103	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Primates	ANCESTRAL SPECIES	7	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Haplorrhini	ANCESTRAL SPECIES	7	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Simiiformes	ANCESTRAL SPECIES	8	ENSGT00500000045038.y.b #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00910000147146 #12	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.k.a #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Catarrhini	ANCESTRAL SPECIES	10	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00910000147146 #12	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.k.a #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00390000009405.a.b	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Hominoidea	ANCESTRAL SPECIES	7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00910000147146 #12	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.k.a #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a.g #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00390000009405.a.b	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Gibbon	MODERN SPECIES	2	MRPS21 (ENSNLEG00000031023) #7	PRPF3 (ENSNLEG00000009841) #8	ENSNLEG00000029292 #9	TARS2 (ENSNLEG00000009858) #10	ECM1 (ENSNLEG00000009877) #11	ENSNLEG00000033454 #12	ADAMTSL4 (ENSNLEG00000009896) #13	MCL1 (ENSNLEG00000009922) #14	ENSNLEG00000009928 #15	GOLPH3L (ENSNLEG00000028540) #16	HORMAD1 (ENSNLEG00000009941) #17	CTSS (ENSNLEG00000009960) #18	CTSK (ENSNLEG00000033510) #19	ARNT (ENSNLEG00000009971) #20	CTXND2 (ENSNLEG00000035943) #21	SETDB1 (ENSNLEG00000009996) #22	CERS2 (ENSNLEG00000010014) #23	ANXA9 (ENSNLEG00000010032) #24	MINDY1 (ENSNLEG00000033005) #25	PRUNE1 (ENSNLEG00000010057) #26	BNIPL (ENSNLEG00000010065) #27	ENSNLEG00000027334 #28	C1orf56 (ENSNLEG00000010073) #29	CDC42SE1 (ENSNLEG00000031841) #30	ENSNLEG00000032141 #31	MLLT11 (ENSNLEG00000030296) #32	GABPB2 (ENSNLEG00000033310) #33	SEMA6C (ENSNLEG00000010093) #34	TNFAIP8L2 (ENSNLEG00000035422) #35	LYSMD1 (ENSNLEG00000032888) #36	SCNM1 (ENSNLEG00000010123) #37
Hominidae	ANCESTRAL SPECIES	6	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00910000147146 #12	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.k.a #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a.g #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00390000009405.a.b	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	6	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00910000147146 #12	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.k.a #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a.g #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00390000009405.a.b.a	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Homo/Pan group	ANCESTRAL SPECIES	7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00910000147146 #12	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.k.a #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a.g #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00390000009405.a.b.a	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00910000146771 #31	ENSGT00860000134665	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37
Pan	ANCESTRAL SPECIES		ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00910000147146 #12	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.k.a #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a.g #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00390000009405.a.b.a	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00860000134665	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Chimpanzee	MODERN SPECIES		PRPF3 (ENSPTRG00000001254) #8	RPRD2 (ENSPTRG00000001255) #9	TARS2 (ENSPTRG00000001256) #10	ECM1 (ENSPTRG00000001257) #11	ADAMTSL4 (ENSPTRG00000001258) #13	ENSPTRG00000040851 #12	MCL1 (ENSPTRG00000001260) #14	ENSA (ENSPTRG00000001261) #15	GOLPH3L (ENSPTRG00000001262) #16	HORMAD1 (ENSPTRG00000001263) #17	CTSS (ENSPTRG00000001264) #18	CTSK (ENSPTRG00000001265) #19	ARNT (ENSPTRG00000001266) #20	ENSPTRG00000044588	CTXND2 (ENSPTRG00000043902) #21	SETDB1 (ENSPTRG00000001267) #22	CERS2 (ENSPTRG00000001268) #23	ANXA9 (ENSPTRG00000001269) #24	MINDY1 (ENSPTRG00000001270) #25	PRUNE1 (ENSPTRG00000050821) #26	BNIPL (ENSPTRG00000001272) #27	C1H1orf56 (ENSPTRG00000001274) #29	CDC42SE1 (ENSPTRG00000023156) #30	ENSPTRG00000050883 #31	ENSPTRG00000049844	GABPB2 (ENSPTRG00000001275) #33	SEMA6C (ENSPTRG00000001276) #34	TNFAIP8L2 (ENSPTRG00000001277) #35	LYSMD1 (ENSPTRG00000001278) #36	SCNM1 (ENSPTRG00000001279) #37	TMOD4 (ENSPTRG00000001280)
Bonobo	MODERN SPECIES		PRPF3 (ENSPPAG00000030983) #8	RPRD2 (ENSPPAG00000028604) #9	TARS2 (ENSPPAG00000042011) #10	ECM1 (ENSPPAG00000031650) #11	ADAMTSL4 (ENSPPAG00000042395) #13	ENSPPAG00000034501 #12	MCL1 (ENSPPAG00000038714) #14	ENSPPAG00000001282 #15	GOLPH3L (ENSPPAG00000017189) #16	HORMAD1 (ENSPPAG00000006843) #17	CTSS (ENSPPAG00000030281) #18	CTSK (ENSPPAG00000041595) #19	ARNT (ENSPPAG00000040647) #20	ENSPPAG00000026470	CTXND2 (ENSPPAG00000024020) #21	SETDB1 (ENSPPAG00000041015) #22	CERS2 (ENSPPAG00000039698) #23	ANXA9 (ENSPPAG00000035171) #24	MINDY1 (ENSPPAG00000038839) #25	PRUNE1 (ENSPPAG00000033014) #26	ENSPPAG00000033368 #27	C1orf56 (ENSPPAG00000031132) #29	CDC42SE1 (ENSPPAG00000036728) #30	ENSPPAG00000023077 #31	ENSPPAG00000000610	GABPB2 (ENSPPAG00000012295) #33	SEMA6C (ENSPPAG00000038335) #34	TNFAIP8L2 (ENSPPAG00000021231) #35	LYSMD1 (ENSPPAG00000036493) #36	SCNM1 (ENSPPAG00000029574) #37	TMOD4 (ENSPPAG00000031353)
Human	MODERN SPECIES		CIART (ENSG00000159208)	MRPS21 (ENSG00000266472) #7	PRPF3 (ENSG00000117360) #8	RPRD2 (ENSG00000163125) #9	TARS2 (ENSG00000143374) #10	ECM1 (ENSG00000143369) #11	ADAMTSL4 (ENSG00000143382) #13	MCL1 (ENSG00000143384) #14	ENSA (ENSG00000143420) #15	GOLPH3L (ENSG00000143457) #16	HORMAD1 (ENSG00000143452) #17	CTSS (ENSG00000163131) #18	CTSK (ENSG00000143387) #19	ARNT (ENSG00000143437) #20	CTXND2 (ENSG00000283324) #21	SETDB1 (ENSG00000143379) #22	CERS2 (ENSG00000143418) #23	ANXA9 (ENSG00000143412) #24	MINDY1 (ENSG00000143409) #25	PRUNE1 (ENSG00000143363) #26	BNIPL (ENSG00000163141) #27	C1orf56 (ENSG00000143443) #29	CDC42SE1 (ENSG00000197622) #30	MLLT11 (ENSG00000213190) #32	GABPB2 (ENSG00000143458) #33	SEMA6C (ENSG00000143434) #34	TNFAIP8L2 (ENSG00000163154) #35	SCNM1 (ENSG00000163156) #37	LYSMD1 (ENSG00000163155) #36	TMOD4 (ENSG00000163157)	VPS72 (ENSG00000163159)
Gorilla	MODERN SPECIES		RPRD2 (ENSGGOG00000004818) #9	TARS2 (ENSGGOG00000006311) #10	ENSGGOG00000006323 #11	ENSGGOG00000041363 #11	ENSGGOG00000042298 #12	ADAMTSL4 (ENSGGOG00000016142) #13	MCL1 (ENSGGOG00000016154) #14	ENSGGOG00000023948 #15	GOLPH3L (ENSGGOG00000000869) #16	HORMAD1 (ENSGGOG00000004337) #17	ENSGGOG00000004909 #18	CTSK (ENSGGOG00000015378) #19	ARNT (ENSGGOG00000015383) #20	ENSGGOG00000023315	CTXND2 (ENSGGOG00000038429) #21	SETDB1 (ENSGGOG00000016308) #22	CERS2 (ENSGGOG00000011486) #23	ANXA9 (ENSGGOG00000005582) #24	MINDY1 (ENSGGOG00000001534) #25	ENSGGOG00000039222 #26	BNIPL (ENSGGOG00000008210) #27	C1orf56 (ENSGGOG00000023531) #29	CDC42SE1 (ENSGGOG00000008215) #30	ENSGGOG00000039380 #31	MLLT11 (ENSGGOG00000040228) #32	GABPB2 (ENSGGOG00000001029) #33	SEMA6C (ENSGGOG00000022199) #34	TNFAIP8L2 (ENSGGOG00000014042) #35	LYSMD1 (ENSGGOG00000014046) #36	SCNM1 (ENSGGOG00000003357) #37	TMOD4 (ENSGGOG00000024182)
Orangutan	MODERN SPECIES		CIART (ENSPPYG00000000903)	MRPS21 (ENSPPYG00000032712) #7	PRPF3 (ENSPPYG00000000900) #8	RPRD2 (ENSPPYG00000000899) #9	TARS2 (ENSPPYG00000000898) #10	ECM1 (ENSPPYG00000000897) #11	ADAMTSL4 (ENSPPYG00000000896) #13	MCL1 (ENSPPYG00000000894) #14	ENSPPYG00000000893 ##15	GOLPH3L (ENSPPYG00000000892) #16	HORMAD1 (ENSPPYG00000000891) #17	CTSS (ENSPPYG00000000890) #18	CTSK (ENSPPYG00000000889) #19	ARNT (ENSPPYG00000000888) #20	CTXND2 (ENSPPYG00000031784) #21	SETDB1 (ENSPPYG00000000887) #22	CERS2 (ENSPPYG00000000886) #23	ANXA9 (ENSPPYG00000000885) #24	MINDY1 (ENSPPYG00000000884) #25	PRUNE1 (ENSPPYG00000000883) #26	ENSPPYG00000000882 #27	C1orf56 (ENSPPYG00000000881) #29	CDC42SE1 (ENSPPYG00000030734) #30	MLLT11 (ENSPPYG00000000879)	GABPB2 (ENSPPYG00000000878) #33	SEMA6C (ENSPPYG00000000877) #34	LYSMD1 (ENSPPYG00000036209) #36	ENSPPYG00000000874 #37	TMOD4 (ENSPPYG00000034301)	VPS72 (ENSPPYG00000000873)	PIP5K1A (ENSPPYG00000000872)
Cercopithecidae	ANCESTRAL SPECIES	22	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00910000147146 #12	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.l.a.a ##15	ENSGT00940000155413.k.a #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00390000009405.a.b	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038.y.b.b ##7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.l.b ##15	ENSGT00940000155413.k.a #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038.y.b.b ##7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.l.b ##15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00390000009405.a.b	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Macaca	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038.y.b.b ##7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.l.b ##15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00390000009405.a.b	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Macaca_a	ANCESTRAL SPECIES		ENSGT00390000003103	ENSGT00390000018360	ENSGT00500000045038.y.b.b ##7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.l.b ##15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00860000134665	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Crab-eating macaque	MODERN SPECIES		C1orf54 (ENSMFAG00000002775)	CIART (ENSMFAG00000042429)	MRPS21 (ENSMFAG00000042375) ##7	PRPF3 (ENSMFAG00000039791) #8	RPRD2 (ENSMFAG00000002559) #9	TARS2 (ENSMFAG00000030387) #10	ECM1 (ENSMFAG00000040115) #11	ADAMTSL4 (ENSMFAG00000002869) #13	MCL1 (ENSMFAG00000042545) #14	ENSA (ENSMFAG00000001523) ##15	GOLPH3L (ENSMFAG00000042364) #16	HORMAD1 (ENSMFAG00000000795) #17	CTSS (ENSMFAG00000035464) #18	CTSK (ENSMFAG00000000402) #19	ARNT (ENSMFAG00000038379) #20	SETDB1 (ENSMFAG00000042328) #22	CERS2 (ENSMFAG00000038604) #23	ENSMFAG00000055601	PIP5K1A (ENSMFAG00000031399)	PSMD4 (ENSMFAG00000000623)	ZNF687 (ENSMFAG00000034438)	PI4KB (ENSMFAG00000004350)	RFX5 (ENSMFAG00000033452)	SELENBP1 (ENSMFAG00000033465)	PSMB4 (ENSMFAG00000033442)	ENSMFAG00000054881	POGZ (ENSMFAG00000043596)	ENSMFAG00000003431	TUFT1 (ENSMFAG00000034076)	SNX27 (ENSMFAG00000030490)	CELF3 (ENSMFAG00000040182)
Rhesus	MODERN SPECIES		CIART (ENSMMUG00000021388)	ENSMMUG00000049420	MRPS21 (ENSMMUG00000021391) ##7	ENSMMUG00000060724	PRPF3 (ENSMMUG00000016301) #8	RPRD2 (ENSMMUG00000007303) #9	TARS2 (ENSMMUG00000006256) #10	ECM1 (ENSMMUG00000006257) #11	ADAMTSL4 (ENSMMUG00000008218) #13	MCL1 (ENSMMUG00000053525) #14	ENSA (ENSMMUG00000012814) ##15	GOLPH3L (ENSMMUG00000010668) #16	HORMAD1 (ENSMMUG00000010669) #17	CTSS (ENSMMUG00000010670) #18	ARNT (ENSMMUG00000000541) #20	SETDB1 (ENSMMUG00000023235) #22	CERS2 (ENSMMUG00000023234) #23	ANXA9 (ENSMMUG00000023231) #24	MINDY1 (ENSMMUG00000010067) #25	PRUNE1 (ENSMMUG00000010068) #26	BNIPL (ENSMMUG00000010071) #27	C1H1orf56 (ENSMMUG00000010072) #29	CDC42SE1 (ENSMMUG00000010074) #30	MLLT11 (ENSMMUG00000010075)	GABPB2 (ENSMMUG00000008402) #33	SEMA6C (ENSMMUG00000007643) #34	TNFAIP8L2 (ENSMMUG00000007897) #35	LYSMD1 (ENSMMUG00000007898) #36	SCNM1 (ENSMMUG00000007900) #37	TMOD4 (ENSMMUG00000007903)	VPS72 (ENSMMUG00000007905)
Pig-tailed macaque	MODERN SPECIES	262	CIART (ENSMNEG00000040203)	ENSMNEG00000031239 ##7	PRPF3 (ENSMNEG00000038161) #8	RPRD2 (ENSMNEG00000028542) #9	TARS2 (ENSMNEG00000042066) #10	ECM1 (ENSMNEG00000015328) #11	ADAMTSL4 (ENSMNEG00000028307) #13	MCL1 (ENSMNEG00000045448) #14	ENSA (ENSMNEG00000031456) ##15	GOLPH3L (ENSMNEG00000008522) #16	HORMAD1 (ENSMNEG00000043307) #17	CTSS (ENSMNEG00000034738) #18	CTSK (ENSMNEG00000033034) #19	ARNT (ENSMNEG00000044100) #20	ENSMNEG00000005779	SETDB1 (ENSMNEG00000017223) #22	CERS2 (ENSMNEG00000042406) #23	ANXA9 (ENSMNEG00000000542) #24	MINDY1 (ENSMNEG00000041868) #25	PRUNE1 (ENSMNEG00000030962) #26	BNIPL (ENSMNEG00000037149) #27	C1orf56 (ENSMNEG00000037405) #29	CDC42SE1 (ENSMNEG00000041697) #30	ENSMNEG00000033578 #31	MLLT11 (ENSMNEG00000022771) #32	GABPB2 (ENSMNEG00000013770) #33	SEMA6C (ENSMNEG00000035534) #34	TNFAIP8L2 (ENSMNEG00000020572) #35	LYSMD1 (ENSMNEG00000029644) #36	SCNM1 (ENSMNEG00000026712) #37	TMOD4 (ENSMNEG00000041160)
Cercopithecinae_b	ANCESTRAL SPECIES	3	ENSGT00390000018360	ENSGT00500000045038.y.b.b ##7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.k.a #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00390000009405.a.b	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00910000146771 #31	ENSGT00860000134665	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37
Olive baboon	MODERN SPECIES		C1orf54 (ENSPANG00000033401)	CIART (ENSPANG00000034379)	MRPS21 (ENSPANG00000030104) ##7	PRPF3 (ENSPANG00000000499) #8	RPRD2 (ENSPANG00000019137) #9	TARS2 (ENSPANG00000016774) #10	ECM1 (ENSPANG00000006364) #11	ADAMTSL4 (ENSPANG00000011009) #13	MCL1 (ENSPANG00000016574) #14	ENSA (ENSPANG00000021851) #15	GOLPH3L (ENSPANG00000036054) #16	HORMAD1 (ENSPANG00000009155) #17	CTSS (ENSPANG00000021581) #18	CTSK (ENSPANG00000009168) #19	ARNT (ENSPANG00000016773) #20	SETDB1 (ENSPANG00000020214) #22	CERS2 (ENSPANG00000012293) #23	ANXA9 (ENSPANG00000012518) #24	MINDY1 (ENSPANG00000015350) #25	PRUNE1 (ENSPANG00000011008) #26	BNIPL (ENSPANG00000005713) #27	C1orf56 (ENSPANG00000012292) #29	CDC42SE1 (ENSPANG00000022420) #30	MLLT11 (ENSPANG00000035992) #32	GABPB2 (ENSPANG00000015567) #33	SEMA6C (ENSPANG00000021850) #34	LYSMD1 (ENSPANG00000008738) #36	TMOD4 (ENSPANG00000000635)	VPS72 (ENSPANG00000000636)	PIP5K1A (ENSPANG00000015349)	PSMD4 (ENSPANG00000010190)
Cercopithecinae_d	ANCESTRAL SPECIES	29	ENSGT00390000003103	ENSGT00390000018360	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.k.a #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00390000009405.a.b	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00860000134665	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Drill	MODERN SPECIES	411	C1orf54 (ENSMLEG00000007055)	CIART (ENSMLEG00000009773)	PRPF3 (ENSMLEG00000040609) #8	RPRD2 (ENSMLEG00000028436) #9	TARS2 (ENSMLEG00000030174) #10	ECM1 (ENSMLEG00000023846) #11	ADAMTSL4 (ENSMLEG00000041962) #13	MCL1 (ENSMLEG00000026079) #14	ENSA (ENSMLEG00000028446) #15	GOLPH3L (ENSMLEG00000042824) #16	HORMAD1 (ENSMLEG00000023333) #17	CTSS (ENSMLEG00000037846) #18	CTSK (ENSMLEG00000035690) #19	ARNT (ENSMLEG00000043783) #20	ENSMLEG00000027987	SETDB1 (ENSMLEG00000033050) #22	CERS2 (ENSMLEG00000037916) #23	ANXA9 (ENSMLEG00000038293) #24	MINDY1 (ENSMLEG00000013546) #25	PRUNE1 (ENSMLEG00000039523) #26	BNIPL (ENSMLEG00000043110) #27	C1orf56 (ENSMLEG00000037789) #29	CDC42SE1 (ENSMLEG00000014068) #30	ENSMLEG00000027133	GABPB2 (ENSMLEG00000043912) #33	ENSMLEG00000033840 #34	TNFAIP8L2 (ENSMLEG00000002703) #35	LYSMD1 (ENSMLEG00000036832) #36	SCNM1 (ENSMLEG00000018977) #37	TMOD4 (ENSMLEG00000044243)	VPS72 (ENSMLEG00000035130)
Sooty mangabey	MODERN SPECIES	153	APH1A (ENSCATG00000033983)	C1orf54 (ENSCATG00000033751)	CIART (ENSCATG00000032392)	PRPF3 (ENSCATG00000041778) #8	RPRD2 (ENSCATG00000033842) #9	TARS2 (ENSCATG00000034784) #10	ECM1 (ENSCATG00000033093) #11	ADAMTSL4 (ENSCATG00000043576) #13	MCL1 (ENSCATG00000032744) #14	ENSCATG00000032600 ##15	GOLPH3L (ENSCATG00000033915) #16	HORMAD1 (ENSCATG00000039929) #17	CTSS (ENSCATG00000036085) #18	CTSK (ENSCATG00000036086) #19	ARNT (ENSCATG00000041677) #20	SETDB1 (ENSCATG00000044888) #22	CERS2 (ENSCATG00000031279) #23	ANXA9 (ENSCATG00000034635) #24	MINDY1 (ENSCATG00000038845) #25	PRUNE1 (ENSCATG00000044946) #26	BNIPL (ENSCATG00000040526) #27	C1orf56 (ENSCATG00000029971) #29	CDC42SE1 (ENSCATG00000032396) #30	ENSCATG00000038418 #31	ENSCATG00000017037	GABPB2 (ENSCATG00000042751) #33	SEMA6C (ENSCATG00000042275) #34	TNFAIP8L2 (ENSCATG00000016739) #35	LYSMD1 (ENSCATG00000037386) #36	SCNM1 (ENSCATG00000042592) #37	TMOD4 (ENSCATG00000032370)
Vervet Monkey	MODERN SPECIES	179	CIART (ENSCSAG00000018088)	MRPS21 (ENSCSAG00000018085) ##7	ENSCSAG00000018084 #9	ENSCSAG00000018079 #9	TARS2 (ENSCSAG00000018075) #10	ECM1 (ENSCSAG00000018071) #11	ADAMTSL4 (ENSCSAG00000018068) #13	MCL1 (ENSCSAG00000018064) #14	ENSCSAG00000018061	ENSA (ENSCSAG00000018058) #15	GOLPH3L (ENSCSAG00000018055) #16	HORMAD1 (ENSCSAG00000018051) #17	CTSS (ENSCSAG00000018046) #18	CTSK (ENSCSAG00000018040) #19	ARNT (ENSCSAG00000018038) #20	SETDB1 (ENSCSAG00000018034) #22	CERS2 (ENSCSAG00000018030) #23	ANXA9 (ENSCSAG00000018026) #24	MINDY1 (ENSCSAG00000018023) #25	PRUNE1 (ENSCSAG00000018020) #26	BNIPL (ENSCSAG00000018015) #27	C1orf56 (ENSCSAG00000018010) #29
Rhinopithecus	ANCESTRAL SPECIES	23	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00910000147146 #12	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.l.a.a ##15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00390000009405.a.b	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00860000134665	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Black snub-nosed monkey	MODERN SPECIES	590	CIART (ENSRBIG00000026376)	PRPF3 (ENSRBIG00000028854) #8	RPRD2 (ENSRBIG00000032833) #9	TARS2 (ENSRBIG00000044518) #10	ECM1 (ENSRBIG00000029889) #11	ADAMTSL4 (ENSRBIG00000044718) #13	MCL1 (ENSRBIG00000031092) #14	ENSRBIG00000027848 ##15	GOLPH3L (ENSRBIG00000033265) #16	HORMAD1 (ENSRBIG00000031865) #17	CTSS (ENSRBIG00000034911) #18	CTSK (ENSRBIG00000011955) #19	ARNT (ENSRBIG00000043770) #20	ENSRBIG00000015869	CTXND2 (ENSRBIG00000017453) #21	SETDB1 (ENSRBIG00000042359) #22	CERS2 (ENSRBIG00000029589) #23	ANXA9 (ENSRBIG00000006699) #24	MINDY1 (ENSRBIG00000041946) #25	PRUNE1 (ENSRBIG00000041012) #26	BNIPL (ENSRBIG00000007306) #27	C1orf56 (ENSRBIG00000041763) #29	CDC42SE1 (ENSRBIG00000036252) #30	GABPB2 (ENSRBIG00000035367) #33	SEMA6C (ENSRBIG00000041675) #34	TNFAIP8L2 (ENSRBIG00000002148) #35	LYSMD1 (ENSRBIG00000043593) #36	SCNM1 (ENSRBIG00000020166) #37	TMOD4 (ENSRBIG00000035077)	VPS72 (ENSRBIG00000027963)	PIP5K1A (ENSRBIG00000040874)
Golden snub-nosed monkey	MODERN SPECIES	2622	RPRD2 (ENSRROG00000044462) #9	TARS2 (ENSRROG00000030946) #10	ECM1 (ENSRROG00000030152) #11	ENSRROG00000044578 #12	ADAMTSL4 (ENSRROG00000035617) #13	MCL1 (ENSRROG00000033266) #14	ENSRROG00000034733 ##15	GOLPH3L (ENSRROG00000042636) #16	HORMAD1 (ENSRROG00000007880) #17	CTSS (ENSRROG00000039722) #18	CTSK (ENSRROG00000036101) #19	ARNT (ENSRROG00000032414) #20	ENSRROG00000010877	ENSRROG00000015516	CTXND2 (ENSRROG00000017486) #21	SETDB1 (ENSRROG00000032628) #22	CERS2 (ENSRROG00000010279) #23	ANXA9 (ENSRROG00000032772) #24	MINDY1 (ENSRROG00000037195) #25	PRUNE1 (ENSRROG00000037584) #26	BNIPL (ENSRROG00000034530) #27	C1orf56 (ENSRROG00000027918) #29	CDC42SE1 (ENSRROG00000045185) #30	ENSRROG00000013259	GABPB2 (ENSRROG00000035884) #33	SEMA6C (ENSRROG00000044266) #34	TNFAIP8L2 (ENSRROG00000027193) #35	LYSMD1 (ENSRROG00000042467) #36	SCNM1 (ENSRROG00000038049) #37	TMOD4 (ENSRROG00000040162)	VPS72 (ENSRROG00000026948)
Platyrrhini	ANCESTRAL SPECIES	12	ENSGT00500000045038.y.b #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00910000147146 #12	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b.e #14	ENSGT00940000155413.k.a #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Cebidae	ANCESTRAL SPECIES	12	ENSGT00500000045038.y.b #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00910000147146 #12	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b.e #14	ENSGT00940000155413.k.a #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Cebidae_a	ANCESTRAL SPECIES	6	ENSGT00500000045038.y.b #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00910000147146 #12	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b.e #14	ENSGT00940000155413.k.a #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503	ENSGT00940000154703.e.a
Capuchin	MODERN SPECIES	188	PRPF3 (ENSCCAG00000026380) #8	RPRD2 (ENSCCAG00000032422) #9	TARS2 (ENSCCAG00000034305) #10	ECM1 (ENSCCAG00000026093) #11	ENSCCAG00000027383 #12	ADAMTSL4 (ENSCCAG00000026279) #13	MCL1 (ENSCCAG00000029442) #14	ENSCCAG00000029199 #15	GOLPH3L (ENSCCAG00000000006) #16	HORMAD1 (ENSCCAG00000028128) #17	CTSS (ENSCCAG00000021854) #18	CTSK (ENSCCAG00000029150) #19	ARNT (ENSCCAG00000029182) #20	ENSCCAG00000025398	CTXND2 (ENSCCAG00000006838) #21	SETDB1 (ENSCCAG00000024882) #22	CERS2 (ENSCCAG00000024890) #23	ANXA9 (ENSCCAG00000029485) #24	MINDY1 (ENSCCAG00000034264) #25	PRUNE1 (ENSCCAG00000032830) #26	BNIPL (ENSCCAG00000035594) #27	C1orf56 (ENSCCAG00000029248) #29	CDC42SE1 (ENSCCAG00000037855) #30	GABPB2 (ENSCCAG00000035213) #33	SEMA6C (ENSCCAG00000023670) #34	TNFAIP8L2 (ENSCCAG00000010675) #35	LYSMD1 (ENSCCAG00000000035) #36	SCNM1 (ENSCCAG00000034389) #37	TMOD4 (ENSCCAG00000031316)	VPS72 (ENSCCAG00000035387)	ENSCCAG00000028432
Bolivian squirrel monkey	MODERN SPECIES	194	MRPS21 (ENSSBOG00000000667) #7	PRPF3 (ENSSBOG00000033104) #8	RPRD2 (ENSSBOG00000020427) #9	TARS2 (ENSSBOG00000001108) #10	ECM1 (ENSSBOG00000031851) #11	ENSSBOG00000003745 #12	ADAMTSL4 (ENSSBOG00000028243) #13	MCL1 (ENSSBOG00000035804) #14	ENSA (ENSSBOG00000030145) #15	GOLPH3L (ENSSBOG00000035901) #16	HORMAD1 (ENSSBOG00000034042) #17	CTSS (ENSSBOG00000027502) #18	CTSK (ENSSBOG00000028605) #19	ARNT (ENSSBOG00000025839) #20	CTXND2 (ENSSBOG00000016796) #21	SETDB1 (ENSSBOG00000028608) #22	CERS2 (ENSSBOG00000033621) #23	ANXA9 (ENSSBOG00000017233) #24	MINDY1 (ENSSBOG00000035915) #25	PRUNE1 (ENSSBOG00000014294) #26	BNIPL (ENSSBOG00000029084) #27	C1orf56 (ENSSBOG00000025901) #29	CDC42SE1 (ENSSBOG00000035657) #30	GABPB2 (ENSSBOG00000029601) #33	SEMA6C (ENSSBOG00000024763) #34	TNFAIP8L2 (ENSSBOG00000004747) #35	LYSMD1 (ENSSBOG00000000350) #36	SCNM1 (ENSSBOG00000032405) #37	TMOD4 (ENSSBOG00000030865)	VPS72 (ENSSBOG00000033206)	ENSSBOG00000033201
Marmoset	MODERN SPECIES	9	MRPS21 (ENSCJAG00000041203) #7	PRPF3 (ENSCJAG00000009926) #8	RPRD2 (ENSCJAG00000006424) #9	MCL1 (ENSCJAG00000006605) #14	TARS2 (ENSCJAG00000006429) #10	ECM1 (ENSCJAG00000006499) #11	ADAMTSL4 (ENSCJAG00000006555) #13	ENSCJAG00000038289	ENSCJAG00000080548	ENSA (ENSCJAG00000046173) #15	GOLPH3L (ENSCJAG00000055606) #16	HORMAD1 (ENSCJAG00000006705) #17	CTSS (ENSCJAG00000006790) #18	CTSK (ENSCJAG00000006804) #19	ARNT (ENSCJAG00000006839) #20	SETDB1 (ENSCJAG00000006972) #22	CERS2 (ENSCJAG00000007043) #23	ANXA9 (ENSCJAG00000007078) #24	MINDY1 (ENSCJAG00000007100) #25	PRUNE1 (ENSCJAG00000007107) #26	BNIPL (ENSCJAG00000007115) #27	C1orf56 (ENSCJAG00000007125) #29	CDC42SE1 (ENSCJAG00000041056) #30	MLLT11 (ENSCJAG00000043847) #32	GABPB2 (ENSCJAG00000007146) #33	SEMA6C (ENSCJAG00000007159) #34	TNFAIP8L2 (ENSCJAG00000046203) #35	LYSMD1 (ENSCJAG00000045898) #36	SCNM1 (ENSCJAG00000007277) #37	TMOD4 (ENSCJAG00000007296)	VPS72 (ENSCJAG00000070474)
Mas night monkey	MODERN SPECIES	784	PRPF3 (ENSANAG00000026138) #8	RPRD2 (ENSANAG00000019468) #9	TARS2 (ENSANAG00000019620) #10	ECM1 (ENSANAG00000031765) #11	ADAMTSL4 (ENSANAG00000019112) #13	ENSANAG00000021748 #14	ENSANAG00000003718	ENSANAG00000029931 ##15	GOLPH3L (ENSANAG00000020389) #16	HORMAD1 (ENSANAG00000021070) #17	CTSS (ENSANAG00000027610) #18	CTSK (ENSANAG00000037073) #19	ARNT (ENSANAG00000021110) #20	ENSANAG00000035985	CTXND2 (ENSANAG00000007098) #21	SETDB1 (ENSANAG00000001819) #22	CERS2 (ENSANAG00000027061) #23	ANXA9 (ENSANAG00000037268) #24	MINDY1 (ENSANAG00000035903) #25	PRUNE1 (ENSANAG00000023005) #26	ENSANAG00000029347	BNIPL (ENSANAG00000034658) #27	C1orf56 (ENSANAG00000033953) #29	CDC42SE1 (ENSANAG00000034234) #30	GABPB2 (ENSANAG00000033560) #33	SEMA6C (ENSANAG00000030841) #34	TNFAIP8L2 (ENSANAG00000013726) #35	ENSANAG00000027900 #36	SCNM1 (ENSANAG00000021348) #37	TMOD4 (ENSANAG00000025034)	VPS72 (ENSANAG00000032435)
Tarsier	MODERN SPECIES	2293										ENSA (ENSTSYG00000029565) #15	GOLPH3L (ENSTSYG00000009078) #16	ENSTSYG00000006025 #17	CTSS (ENSTSYG00000000892) #18	CTSK (ENSTSYG00000006055) #19	ARNT (ENSTSYG00000006074) #20	SETDB1 (ENSTSYG00000012646) #22	ENSTSYG00000031523
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Lemuriformes	ANCESTRAL SPECIES	11	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b.c.a #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Mouse lemur	MODERN SPECIES	11	RPRD2 (ENSMICG00000007991) #9	TARS2 (ENSMICG00000008016) #10	ECM1 (ENSMICG00000044220) #11	ADAMTSL4 (ENSMICG00000008061) #13	MCL1 (ENSMICG00000034250) #14	ENSMICG00000029534	ENSA (ENSMICG00000004996) #15	GOLPH3L (ENSMICG00000027785) #16	HORMAD1 (ENSMICG00000036889) #17	ENSMICG00000027297	CTSS (ENSMICG00000032451) #18	CTSK (ENSMICG00000005853) #19	ARNT (ENSMICG00000005872) #20	ENSMICG00000034737	CTXND2 (ENSMICG00000044474) #21	SETDB1 (ENSMICG00000000425) #22	CERS2 (ENSMICG00000000441) #23	ANXA9 (ENSMICG00000000445) #24	MINDY1 (ENSMICG00000000449) #25	PRUNE1 (ENSMICG00000000451) #26	BNIPL (ENSMICG00000000460) #27	C1orf56 (ENSMICG00000000470) #29	CDC42SE1 (ENSMICG00000045944) #30	GABPB2 (ENSMICG00000006802) #33	SEMA6C (ENSMICG00000006866) #34	LYSMD1 (ENSMICG00000026636) #36	SCNM1 (ENSMICG00000047233) #37	TMOD4 (ENSMICG00000006822)	VPS72 (ENSMICG00000006827)	PIP5K1A (ENSMICG00000033339)	PSMD4 (ENSMICG00000016117)
Lemuriformes_a	ANCESTRAL SPECIES	19	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b.c.a #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Coquerels sifaka	MODERN SPECIES	750	ENSPCOG00000023504 #7	PRPF3 (ENSPCOG00000013828) #8	ENSPCOG00000022424	RPRD2 (ENSPCOG00000015902) #9	TARS2 (ENSPCOG00000017247) #10	ECM1 (ENSPCOG00000027232) #11	ADAMTSL4 (ENSPCOG00000010721) #13	ENSPCOG00000025226 #14	ENSA (ENSPCOG00000015526) #15	GOLPH3L (ENSPCOG00000019149) #16	HORMAD1 (ENSPCOG00000026567) #17	CTSS (ENSPCOG00000015772) #18	CTSK (ENSPCOG00000022303) #19	ARNT (ENSPCOG00000028373) #20	CTXND2 (ENSPCOG00000010066) #21	SETDB1 (ENSPCOG00000027869) #22	CERS2 (ENSPCOG00000020561) #23	ANXA9 (ENSPCOG00000019416) #24	PRUNE1 (ENSPCOG00000028302) #26	BNIPL (ENSPCOG00000014517) #27	C1orf56 (ENSPCOG00000004934) #29	CDC42SE1 (ENSPCOG00000015975) #30	GABPB2 (ENSPCOG00000024488) #33	SEMA6C (ENSPCOG00000023729) #34	LYSMD1 (ENSPCOG00000015497) #36	SCNM1 (ENSPCOG00000004493) #37	TMOD4 (ENSPCOG00000019379)	VPS72 (ENSPCOG00000028469)	PIP5K1A (ENSPCOG00000010811)	PSMD4 (ENSPCOG00000027248)	ENSPCOG00000013223
Greater bamboo lemur	MODERN SPECIES	998		RPRD2 (ENSPSMG00000021029) #9	TARS2 (ENSPSMG00000021195) #10	ECM1 (ENSPSMG00000021284) #11	ADAMTSL4 (ENSPSMG00000021345) #13	ENSPSMG00000021413 #14	ENSPSMG00000021426	ENSA (ENSPSMG00000021455) #15	GOLPH3L (ENSPSMG00000021465) #16	ENSPSMG00000021475	HORMAD1 (ENSPSMG00000021500) #17	CTSS (ENSPSMG00000021523) #18	CTSK (ENSPSMG00000021532) #19	ARNT (ENSPSMG00000021753) #20	CTXND2 (ENSPSMG00000021975) #21	SETDB1 (ENSPSMG00000022003) #22	CERS2 (ENSPSMG00000022037) #23	ANXA9 (ENSPSMG00000022049) #24	MINDY1 (ENSPSMG00000022064) #25	PRUNE1 (ENSPSMG00000022096) #26	BNIPL (ENSPSMG00000022120) #27	C1orf56 (ENSPSMG00000022123) #29	CDC42SE1 (ENSPSMG00000022130) #30	MLLT11 (ENSPSMG00000022132) #32	GABPB2 (ENSPSMG00000022159) #33	SEMA6C (ENSPSMG00000022272) #34
Bushbaby	MODERN SPECIES	289	CIART (ENSOGAG00000004846)	PRPF3 (ENSOGAG00000005352) #8	ENSOGAG00000028162	RPRD2 (ENSOGAG00000029308) #9	TARS2 (ENSOGAG00000005360) #10	ECM1 (ENSOGAG00000005365) #11	ADAMTSL4 (ENSOGAG00000006696) #13	MCL1 (ENSOGAG00000016421) #14	ENSA (ENSOGAG00000005863) #15	GOLPH3L (ENSOGAG00000029017) #16	HORMAD1 (ENSOGAG00000005640) #17	CTSS (ENSOGAG00000014743) #18	CTSK (ENSOGAG00000004519) #19	ARNT (ENSOGAG00000004523) #20	ENSOGAG00000024502	SETDB1 (ENSOGAG00000010320) #22	CERS2 (ENSOGAG00000010325) #23	ANXA9 (ENSOGAG00000010336) #24	MINDY1 (ENSOGAG00000010340) #25	PRUNE1 (ENSOGAG00000010345) #26	BNIPL (ENSOGAG00000010350) #27	C1orf56 (ENSOGAG00000032399) #29	CDC42SE1 (ENSOGAG00000010356) #30	MLLT11 (ENSOGAG00000034023) #32	GABPB2 (ENSOGAG00000010359) #33	SEMA6C (ENSOGAG00000010363) #34	TNFAIP8L2 (ENSOGAG00000002842) #35	LYSMD1 (ENSOGAG00000002844) #36	SCNM1 (ENSOGAG00000032806) #37	TMOD4 (ENSOGAG00000006400)	VPS72 (ENSOGAG00000006403)
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Glires	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Rodentia	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Muroidea	ANCESTRAL SPECIES	6	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00390000003103	ENSGT00390000018360	ENSGT00500000045038.u #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Cricetinae	ANCESTRAL SPECIES	12	ENSGT00390000003103	ENSGT00390000018360	ENSGT00500000045038.u #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Chinese hamster chok1gshd	MODERN SPECIES	66	Prpf3 (ENSCGRG00001019100) #8	Rprd2 (ENSCGRG00001021587) #9	Tars2 (ENSCGRG00001023517) #10	Ecm1 (ENSCGRG00001009335) #11	ENSCGRG00001003470	Adamtsl4 (ENSCGRG00001017255) #13	Mcl1 (ENSCGRG00001017446) #14	Ensa (ENSCGRG00001022170) #15	Golph3l (ENSCGRG00001000763) #16	Hormad1 (ENSCGRG00001016359) #17	Ctss (ENSCGRG00001009630) #18	Ctsk (ENSCGRG00001018122) #19	Arnt (ENSCGRG00001020065) #20	ENSCGRG00001022347	Ctxnd2 (ENSCGRG00001010032) #21	Setdb1 (ENSCGRG00001010822) #22	Cers2 (ENSCGRG00001014039) #23	Anxa9 (ENSCGRG00001018214) #24	Mindy1 (ENSCGRG00001015953) #25	Prune1 (ENSCGRG00001013833) #26	Bnipl (ENSCGRG00001024336) #27	Gm128 (ENSCGRG00001021721) #29	Cdc42se1 (ENSCGRG00001000423) #30	Mllt11 (ENSCGRG00001003537) #32	Gabpb2 (ENSCGRG00001013536) #33	Sema6c (ENSCGRG00001003943) #34	Tnfaip8l2 (ENSCGRG00001010397) #35	Lysmd1 (ENSCGRG00001007524) #36	Scnm1 (ENSCGRG00001006323) #37	Tmod4 (ENSCGRG00001019854)	Vps72 (ENSCGRG00001017696)
Golden Hamster	MODERN SPECIES	782	BC028528 (ENSMAUG00000009366)	ENSMAUG00000001664	ENSMAUG00000014535 #7	Prpf3 (ENSMAUG00000017112) #8	Rprd2 (ENSMAUG00000019875) #9	Tars2 (ENSMAUG00000008184) #10	Ecm1 (ENSMAUG00000016262) #11	Adamtsl4 (ENSMAUG00000014851) #13	Mcl1 (ENSMAUG00000007430) #14	Ensa (ENSMAUG00000008619) #15	Golph3l (ENSMAUG00000012523) #16	Hormad1 (ENSMAUG00000020053) #17	Ctss (ENSMAUG00000021301) #18	Ctsk (ENSMAUG00000019242) #19	ENSMAUG00000009522 #20	Setdb1 (ENSMAUG00000021391) #22	Cers2 (ENSMAUG00000015178) #23	Anxa9 (ENSMAUG00000021724) #24	Mindy1 (ENSMAUG00000020108) #25	Prune1 (ENSMAUG00000000710) #26	Bnipl (ENSMAUG00000008535) #27	ENSMAUG00000014653 #29	Cdc42se1 (ENSMAUG00000000575) #30	Mllt11 (ENSMAUG00000018228) #32	Gabpb2 (ENSMAUG00000015210) #33	Sema6c (ENSMAUG00000019207) #34	Tnfaip8l2 (ENSMAUG00000017288) #35	Lysmd1 (ENSMAUG00000019865) #36	Scnm1 (ENSMAUG00000021081) #37	Tmod4 (ENSMAUG00000016821)	Vps72 (ENSMAUG00000005849)
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00390000018360	ENSGT00500000045038.u #7	ENSGT00500000045038.v.a.b #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Prairie vole	MODERN SPECIES	8	BC028528 (ENSMOCG00000003466)	Ciart (ENSMOCG00000020599)	ENSMOCG00000004675 #7	Prpf3 (ENSMOCG00000000242) #8	ENSMOCG00000013494 #9	Tars2 (ENSMOCG00000018432) #10	Ecm1 (ENSMOCG00000019294) #11	Adamtsl4 (ENSMOCG00000008356) #13	Mcl1 (ENSMOCG00000000395) #14	Ensa (ENSMOCG00000017464) #15	Golph3l (ENSMOCG00000018491) #16	Hormad1 (ENSMOCG00000018601) #17	Ctss (ENSMOCG00000022241) #18	Ctsk (ENSMOCG00000022513) #19	Arnt (ENSMOCG00000001627) #20	Setdb1 (ENSMOCG00000017407) #22	Cers2 (ENSMOCG00000001144) #23	Anxa9 (ENSMOCG00000000205) #24	Mindy1 (ENSMOCG00000021873) #25	Prune1 (ENSMOCG00000007764) #26	Bnipl (ENSMOCG00000013338) #27	Gm128 (ENSMOCG00000000577) #29	ENSMOCG00000018578 #30	Mllt11 (ENSMOCG00000019439) #32	Gabpb2 (ENSMOCG00000020822) #33	Sema6c (ENSMOCG00000015540) #34	Tnfaip8l2 (ENSMOCG00000020387) #35	Lysmd1 (ENSMOCG00000006887) #36	Scnm1 (ENSMOCG00000008260) #37	Tmod4 (ENSMOCG00000012934)	Vps72 (ENSMOCG00000013004)
Northern American deer mouse	MODERN SPECIES	19	ENSPEMG00000013980 #7	ENSPEMG00000030510	Prpf3 (ENSPEMG00000011672) #8	ENSPEMG00000024405	Rprd2 (ENSPEMG00000013381) #9	Tars2 (ENSPEMG00000014203) #10	Ecm1 (ENSPEMG00000016753) #11	Adamtsl4 (ENSPEMG00000008970) #13	ENSPEMG00000031072 #14	Ensa (ENSPEMG00000024023) #15	Golph3l (ENSPEMG00000029486) #16	Hormad1 (ENSPEMG00000012403) #17	Ctss (ENSPEMG00000009697) #18	Ctsk (ENSPEMG00000001057) #19	Arnt (ENSPEMG00000029682) #20	Setdb1 (ENSPEMG00000010553) #22	Cers2 (ENSPEMG00000016044) #23	ENSPEMG00000030061	Anxa9 (ENSPEMG00000011713) #24	Mindy1 (ENSPEMG00000009924) #25	Prune1 (ENSPEMG00000028397) #26	Bnipl (ENSPEMG00000010539) #27	Gm128 (ENSPEMG00000024273) #29	Cdc42se1 (ENSPEMG00000029475) #30	Mllt11 (ENSPEMG00000030271) #32	Gabpb2 (ENSPEMG00000016588) #33	Sema6c (ENSPEMG00000024024) #34	Tnfaip8l2 (ENSPEMG00000017636) #35	Lysmd1 (ENSPEMG00000029321) #36	Scnm1 (ENSPEMG00000023042) #37	Tmod4 (ENSPEMG00000014116)
Murinae	ANCESTRAL SPECIES	5	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Mus	ANCESTRAL SPECIES	7	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Mus_A	ANCESTRAL SPECIES	9	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.v #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Mus_B	ANCESTRAL SPECIES	8	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.v #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Mus_C	ANCESTRAL SPECIES	6	ENSGT00500000045038.t #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.v #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000170759	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Steppe mouse	MODERN SPECIES	3111	Prpf3 (ENSMSIG00000007342) #8	Rprd2 (ENSMSIG00000007289) #9	Tars2 (ENSMSIG00000006741) #10	Ecm1 (ENSMSIG00000006669) #11	Adamtsl4 (ENSMSIG00000006628) #13	Mcl1 (ENSMSIG00000006604) #14	Ensa (ENSMSIG00000006584) #15	Golph3l (ENSMSIG00000006388) #16	ENSMSIG00000006052 #17	Ctss (ENSMSIG00000005997) #18	Ctsk (ENSMSIG00000005966) #19	Arnt (ENSMSIG00000005683) #20	ENSMSIG00000005664	ENSMSIG00000005661	Ctxnd2 (ENSMSIG00000005609) #21	Setdb1 (ENSMSIG00000005513) #22	Cers2 (ENSMSIG00000005476) #23	Anxa9 (ENSMSIG00000005379) #24	Mindy1 (ENSMSIG00000005316) #25	Prune1 (ENSMSIG00000005284) #26	Bnipl (ENSMSIG00000005186) #27	Gm128 (ENSMSIG00000005144) #29	Cdc42se1 (ENSMSIG00000005109) #30	Mllt11 (ENSMSIG00000005094) #32	Gabpb2 (ENSMSIG00000005022) #33	Sema6c (ENSMSIG00000004785) #34	Tnfaip8l2 (ENSMSIG00000004763) #35	Lysmd1 (ENSMSIG00000004745) #36	Scnm1 (ENSMSIG00000004699) #37	Tmod4 (ENSMSIG00000004640)	ENSMSIG00000004624
Mouse	MODERN SPECIES	12	Ciart (ENSMUSG00000038550)	Mrps21 (ENSMUSG00000054312) #7	Prpf3 (ENSMUSG00000015748) #8	Rprd2 (ENSMUSG00000028106) #9	Tars2 (ENSMUSG00000028107) #10	Ecm1 (ENSMUSG00000028108) #11	Adamtsl4 (ENSMUSG00000015850) #13	Mcl1 (ENSMUSG00000038612) #14	Ensa (ENSMUSG00000038619) #15	Golph3l (ENSMUSG00000046519) #16	Hormad1 (ENSMUSG00000028109) #17	Ctss (ENSMUSG00000038642) #18	Ctsk (ENSMUSG00000028111) #19	Arnt (ENSMUSG00000015522) #20	Ctxnd2 (ENSMUSG00000105734) #21	Setdb1 (ENSMUSG00000015697) #22	Cers2 (ENSMUSG00000015714) #23	Anxa9 (ENSMUSG00000015702) #24	Mindy1 (ENSMUSG00000038712) #25	Prune1 (ENSMUSG00000015711) #26	Bnipl (ENSMUSG00000028115) #27	Gm128 (ENSMUSG00000068860) #29	Cdc42se1 (ENSMUSG00000046722) #30	Mllt11 (ENSMUSG00000053192) #32	Gabpb2 (ENSMUSG00000038766) #33	Sema6c (ENSMUSG00000038777) #34	Tnfaip8l2 (ENSMUSG00000013707) #35	Lysmd1 (ENSMUSG00000053769) #36	Scnm1 (ENSMUSG00000092607) #37	Tmod4 (ENSMUSG00000005628)	Vps72 (ENSMUSG00000008958)
Ryukyu mouse	MODERN SPECIES	12	BC028528 (MGP_CAROLIEiJ_G0025357)	MGP_CAROLIEiJ_G0025356	Mrps21 (MGP_CAROLIEiJ_G0025355) #7	Prpf3 (MGP_CAROLIEiJ_G0025354) #8	Rprd2 (MGP_CAROLIEiJ_G0025353) #9	Tars2 (MGP_CAROLIEiJ_G0025352) #10	Ecm1 (MGP_CAROLIEiJ_G0025351) #11	Adamtsl4 (MGP_CAROLIEiJ_G0025350) #13	Mcl1 (MGP_CAROLIEiJ_G0025349) #14	Ensa (MGP_CAROLIEiJ_G0025348) #15	MGP_CAROLIEiJ_G0025347 ##16	Hormad1 (MGP_CAROLIEiJ_G0025346) #17	Ctss (MGP_CAROLIEiJ_G0025345) #18	Ctsk (MGP_CAROLIEiJ_G0025344) #19	Arnt (MGP_CAROLIEiJ_G0025343) #20	Setdb1 (MGP_CAROLIEiJ_G0025342) #22	Cers2 (MGP_CAROLIEiJ_G0025341) #23	Anxa9 (MGP_CAROLIEiJ_G0025340) #24	Mindy1 (MGP_CAROLIEiJ_G0025339) #25	Prune1 (MGP_CAROLIEiJ_G0025338) #26	Bnipl (MGP_CAROLIEiJ_G0025337) #27	Gm128 (MGP_CAROLIEiJ_G0025336) #29	Cdc42se1 (MGP_CAROLIEiJ_G0025335) #30	Mllt11 (MGP_CAROLIEiJ_G0025334) #32	MGP_CAROLIEiJ_G0025333 #33	Sema6c (MGP_CAROLIEiJ_G0025332) #34	Tnfaip8l2 (MGP_CAROLIEiJ_G0025331) #35	MGP_CAROLIEiJ_G0025330 #36	MGP_CAROLIEiJ_G0025329 #36	MGP_CAROLIEiJ_G0025328 #37	Tmod4 (MGP_CAROLIEiJ_G0025327)
Rat	MODERN SPECIES	11	C2H1orf54 (ENSRNOG00000059750)	Ciart (ENSRNOG00000042717)	Mrps21 (ENSRNOG00000024845) #7	Prpf3 (ENSRNOG00000025629) #8	Rprd2 (ENSRNOG00000054294) #9	Tars2 (ENSRNOG00000057194) #10	Ecm1 (ENSRNOG00000021166) #11	Adamtsl4 (ENSRNOG00000049385) #13	Mcl1 (ENSRNOG00000063678) #14	Ensa (ENSRNOG00000048617) #15	Golph3l (ENSRNOG00000047620) #16	Hormad1 (ENSRNOG00000021160) #17	Ctss (ENSRNOG00000021157) #18	Ctsk (ENSRNOG00000021155) #19	Arnt (ENSRNOG00000031174) #20	Setdb1 (ENSRNOG00000021143) #22	Cers2 (ENSRNOG00000021138) #23	Anxa9 (ENSRNOG00000021134) #24	Mindy1 (ENSRNOG00000021131) #25	Prune1 (ENSRNOG00000021120) #26	Bnipl (ENSRNOG00000021116) #27	C2h1orf56 (ENSRNOG00000021656) #29	Gabpb2 (ENSRNOG00000021105) #33	Sema6c (ENSRNOG00000021101) #34	Tnfaip8l2 (ENSRNOG00000021100) #35	Lysmd1 (ENSRNOG00000021099) #36	Scnm1 (ENSRNOG00000021092) #37	Tmod4 (ENSRNOG00000021088)	Vps72 (ENSRNOG00000021081)	Pip5k1a (ENSRNOG00000021068)	Psmd4 (ENSRNOG00000021042)
Upper Galilee mountains blind mole rat	MODERN SPECIES	593																Setdb1 (ENSNGAG00000020151) #22	Cers2 (ENSNGAG00000016719) #23	Anxa9 (ENSNGAG00000015153) #24	Mindy1 (ENSNGAG00000020364) #25	Prune1 (ENSNGAG00000019947) #26	Bnipl (ENSNGAG00000001458) #27	Gm128 (ENSNGAG00000015278) #29	Cdc42se1 (ENSNGAG00000010539) #30	Mllt11 (ENSNGAG00000002849) #32	ENSNGAG00000021741 #33	Sema6c (ENSNGAG00000020194) #34	Tnfaip8l2 (ENSNGAG00000011818) #35	Lysmd1 (ENSNGAG00000007843) #36	Scnm1 (ENSNGAG00000005774) #37	Tmod4 (ENSNGAG00000002605)	Vps72 (ENSNGAG00000022821)
Kangaroo rat	MODERN SPECIES	345	BC028528 (ENSDORG00000011695)	ENSDORG00000025269	Mrps21 (ENSDORG00000030111) #7	Prpf3 (ENSDORG00000008664) #8	Rprd2 (ENSDORG00000023813) #9	Tars2 (ENSDORG00000007569) #10	Ecm1 (ENSDORG00000007570) #11	Adamtsl4 (ENSDORG00000000397) #13	Mcl1 (ENSDORG00000011424) #14	Ensa (ENSDORG00000011425) #15	Golph3l (ENSDORG00000024987) #16	Hormad1 (ENSDORG00000008931) #17	Ctss (ENSDORG00000011000) #18	Ctsk (ENSDORG00000027450) #19	ENSDORG00000023883 #20	Setdb1 (ENSDORG00000006830) #22	Cers2 (ENSDORG00000006831) #23	Anxa9 (ENSDORG00000009615) #24	Mindy1 (ENSDORG00000007366) #25	Prune1 (ENSDORG00000007367) #26	Bnipl (ENSDORG00000007368) #27	ENSDORG00000026052 #29	Cdc42se1 (ENSDORG00000007370) #30	Mllt11 (ENSDORG00000030219) #32	Gabpb2 (ENSDORG00000005828) #33	Sema6c (ENSDORG00000015324) #34	Tnfaip8l2 (ENSDORG00000024206) #35	Lysmd1 (ENSDORG00000028528) #36	Scnm1 (ENSDORG00000010356) #37	Tmod4 (ENSDORG00000010358)	Vps72 (ENSDORG00000010360)
Rodentia_A	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Sciuridae	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.q.b #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895.i.a #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Marmotini	ANCESTRAL SPECIES	33	ENSGT00940000164936	ENSGT00500000045038.r #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.q.b #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895.i.a #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Marmotini_b	ANCESTRAL SPECIES	77	ENSGT00940000164936	ENSGT00500000045038.r #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413.q.b #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895.i.a #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Squirrel	MODERN SPECIES	180	C1orf54 (ENSSTOG00000006055)	ENSSTOG00000024097	ENSSTOG00000019516 #7	PRPF3 (ENSSTOG00000001889) #8	RPRD2 (ENSSTOG00000001895) #9	TARS2 (ENSSTOG00000008311) #10	ECM1 (ENSSTOG00000008340) #11	ADAMTSL4 (ENSSTOG00000024198) #13	MCL1 (ENSSTOG00000027465) #14	ENSA (ENSSTOG00000002742) #15	GOLPH3L (ENSSTOG00000002747) #16	HORMAD1 (ENSSTOG00000002768) #17	CTSS (ENSSTOG00000021432) #18	CTSK (ENSSTOG00000013868) #19	ARNT (ENSSTOG00000013876) #20	SETDB1 (ENSSTOG00000006770) #22	CERS2 (ENSSTOG00000006797) #23	ANXA9 (ENSSTOG00000006824) #24	MINDY1 (ENSSTOG00000006840) #25	PRUNE1 (ENSSTOG00000006879) #26	BNIPL (ENSSTOG00000006902) #27	ENSSTOG00000021284 #29	CDC42SE1 (ENSSTOG00000032349) #30	ENSSTOG00000026549 #32	SEMA6C (ENSSTOG00000000573) #34	GABPB2 (ENSSTOG00000000567) #33	TNFAIP8L2 (ENSSTOG00000000585) #35	LYSMD1 (ENSSTOG00000000588) #36	SCNM1 (ENSSTOG00000000590) #37	TMOD4 (ENSSTOG00000000592)	VPS72 (ENSSTOG00000025406)
Arctic ground squirrel	MODERN SPECIES	298	APH1A (ENSUPAG00010001823)	C1orf54 (ENSUPAG00010001839)	CIART (ENSUPAG00010001847)	PRPF3 (ENSUPAG00010001860) #8	RPRD2 (ENSUPAG00010001879) #9	TARS2 (ENSUPAG00010001943) #10	ECM1 (ENSUPAG00010002264) #11	ADAMTSL4 (ENSUPAG00010002294) #13	MCL1 (ENSUPAG00010002404) #14	ENSA (ENSUPAG00010002412) #15	HORMAD1 (ENSUPAG00010002435) #17	CTSS (ENSUPAG00010002451) #18	CTSK (ENSUPAG00010002778) #19	ARNT (ENSUPAG00010002789) #20	CTXND2 (ENSUPAG00010002982) #21	SETDB1 (ENSUPAG00010002991) #22	CERS2 (ENSUPAG00010003717) #23	ANXA9 (ENSUPAG00010003775) #24	MINDY1 (ENSUPAG00010003812) #25	PRUNE1 (ENSUPAG00010003831) #26	BNIPL (ENSUPAG00010003858) #27	C1orf56 (ENSUPAG00010003917) #29	CDC42SE1 (ENSUPAG00010003923) #30	ENSUPAG00010003938 #32	GABPB2 (ENSUPAG00010003948) #33	SEMA6C (ENSUPAG00010003983) #34	TNFAIP8L2 (ENSUPAG00010004011) #35	ENSUPAG00010004016 #36	SCNM1 (ENSUPAG00010004024) #37	TMOD4 (ENSUPAG00010004052)	VPS72 (ENSUPAG00010004077)
Alpin marmot	MODERN SPECIES	85	APH1A (ENSMMMG00000019524)	C1orf54 (ENSMMMG00000019516)	CIART (ENSMMMG00000019509)	PRPF3 (ENSMMMG00000019495) #8	RPRD2 (ENSMMMG00000019468) #9	TARS2 (ENSMMMG00000019396) #10	ECM1 (ENSMMMG00000019374) #11	ADAMTSL4 (ENSMMMG00000019345) #13	ENSMMMG00000019337 #15	GOLPH3L (ENSMMMG00000019322) #16	HORMAD1 (ENSMMMG00000019288) #17	CTSS (ENSMMMG00000019262) #18	CTSK (ENSMMMG00000019259) #19	ARNT (ENSMMMG00000019205) #20	CTXND2 (ENSMMMG00000019184) #21	SETDB1 (ENSMMMG00000019144) #22	CERS2 (ENSMMMG00000019137) #23	ANXA9 (ENSMMMG00000019113) #24	MINDY1 (ENSMMMG00000019104) #25	PRUNE1 (ENSMMMG00000019091) #26	BNIPL (ENSMMMG00000019067) #27	C1orf56 (ENSMMMG00000019063) #29	CDC42SE1 (ENSMMMG00000019055) #30	ENSMMMG00000019054 #32	GABPB2 (ENSMMMG00000019037) #33	SEMA6C (ENSMMMG00000018987) #34	TNFAIP8L2 (ENSMMMG00000018952) #35	LYSMD1 (ENSMMMG00000018943) #36	SCNM1 (ENSMMMG00000018931) #37	TMOD4 (ENSMMMG00000018917)	VPS72 (ENSMMMG00000018907)
Eurasian red squirrel	MODERN SPECIES		PRPF3 (ENSSVLG00005001025) #8	RPRD2 (ENSSVLG00005001061) #9	TARS2 (ENSSVLG00005001101) #10	ECM1 (ENSSVLG00005001143) #11	ADAMTSL4 (ENSSVLG00005001195) #13	MCL1 (ENSSVLG00005001232) #14	ENSSVLG00005001308 #15	ENSSVLG00005001356	GOLPH3L (ENSSVLG00005001367) #16	HORMAD1 (ENSSVLG00005001438) #17	ENSSVLG00005001503	CTSS (ENSSVLG00005001527) #18	CTSK (ENSSVLG00005001562) #19	ARNT (ENSSVLG00005001590) #20	CTXND2 (ENSSVLG00005001652) #21	SETDB1 (ENSSVLG00005001698) #22	CERS2 (ENSSVLG00005001737) #23	ANXA9 (ENSSVLG00005001768) #24	MINDY1 (ENSSVLG00005001783) #25	ENSSVLG00005001812 #26	BNIPL (ENSSVLG00005001858) #27	C1orf56 (ENSSVLG00005001885) #29	CDC42SE1 (ENSSVLG00005001905) #30	ENSSVLG00005001925 #32	ENSSVLG00005001950 #33	SEMA6C (ENSSVLG00005001999) #34	TNFAIP8L2 (ENSSVLG00005002031) #35	LYSMD1 (ENSSVLG00005002044) #36	SCNM1 (ENSSVLG00005002067) #37	TMOD4 (ENSSVLG00005002090)	VPS72 (ENSSVLG00005002112)
Hystricomorpha	ANCESTRAL SPECIES	23	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Hystricomorpha_a	ANCESTRAL SPECIES	59	ENSGT00390000003103	ENSGT00940000164936	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Hystricomorpha_b	ANCESTRAL SPECIES	79	ENSGT00390000003103	ENSGT00940000164936	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00900000143229	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Long-tailed chinchilla	MODERN SPECIES	295													CTSK (ENSCLAG00000000173) #19	ARNT (ENSCLAG00000000889) #20	ENSCLAG00000000457 #32	SETDB1 (ENSCLAG00000000242) #22	CERS2 (ENSCLAG00000000260) #23	ANXA9 (ENSCLAG00000000291) #24	MINDY1 (ENSCLAG00000000123) #25	PRUNE1 (ENSCLAG00000000177) #26	BNIPL (ENSCLAG00000000367) #27	C1orf56 (ENSCLAG00000000381) #29	CDC42SE1 (ENSCLAG00000001637) #30	ENSCLAG00000001683 #32	GABPB2 (ENSCLAG00000001712) #33	SEMA6C (ENSCLAG00000001760) #34	TNFAIP8L2 (ENSCLAG00000000171) #35	LYSMD1 (ENSCLAG00000000193) #36	TMOD4 (ENSCLAG00000000301)	SCNM1 (ENSCLAG00000000328) #37	VPS72 (ENSCLAG00000000394)
Degu	MODERN SPECIES	89	ENSODEG00000013089	ENSODEG00000011678 #7	ENSODEG00000011363 #8	RPRD2 (ENSODEG00000012617) #9	TARS2 (ENSODEG00000011883) #10	ECM1 (ENSODEG00000011744) #11	ENSODEG00000013487 #13	ENSODEG00000011170 #15	GOLPH3L (ENSODEG00000011029) #16	HORMAD1 (ENSODEG00000012417) #17	CTSS (ENSODEG00000010580) #18	ENSODEG00000012573 #19	ENSODEG00000011559 #20	ENSODEG00000012445	ENSODEG00000012710	SETDB1 (ENSODEG00000012471) #22	CERS2 (ENSODEG00000012022) #23	ANXA9 (ENSODEG00000011014) #24	MINDY1 (ENSODEG00000010980) #25	PRUNE1 (ENSODEG00000010818) #26	BNIPL (ENSODEG00000011106) #27	C1orf56 (ENSODEG00000010338) #29	CDC42SE1 (ENSODEG00000010472) #30	ENSODEG00000012396 #32	GABPB2 (ENSODEG00000010710) #33	SEMA6C (ENSODEG00000011548) #34	TNFAIP8L2 (ENSODEG00000011478) #35	LYSMD1 (ENSODEG00000011246) #36	SCNM1 (ENSODEG00000013925) #37	TMOD4 (ENSODEG00000014977)	ENSODEG00000010899
Guinea pig	MODERN SPECIES	2	C1orf54 (ENSCPOG00000026169)	ENSCPOG00000035575	MRPS21 (ENSCPOG00000020443) #7	PRPF3 (ENSCPOG00000008068) #8	RPRD2 (ENSCPOG00000040179) #9	ENSCPOG00000010586 #10	ECM1 (ENSCPOG00000010599) #11	ADAMTSL4 (ENSCPOG00000011954) #13	MCL1 (ENSCPOG00000040407) #14	ENSA (ENSCPOG00000033807) #15	GOLPH3L (ENSCPOG00000005605) #16	HORMAD1 (ENSCPOG00000006235) #17	CTSS (ENSCPOG00000010629) #18	CTSK (ENSCPOG00000023854) #19	Arnt (ENSCPOG00000014578) #20	SETDB1 (ENSCPOG00000001632) #22	CERS2 (ENSCPOG00000001637) #23	ANXA9 (ENSCPOG00000001639) #24	MINDY1 (ENSCPOG00000001640) #25	PRUNE1 (ENSCPOG00000001641) #26	BNIPL (ENSCPOG00000026618) #27	C1orf56 (ENSCPOG00000025771) #29	CDC42SE1 (ENSCPOG00000036299) #30	MLLT11 (ENSCPOG00000036668) #32	GABPB2 (ENSCPOG00000011789) #33	SEMA6C (ENSCPOG00000002176) #34	TNFAIP8L2 (ENSCPOG00000034011) #35	LYSMD1 (ENSCPOG00000036409) #36	SCNM1 (ENSCPOG00000002184) #37	TMOD4 (ENSCPOG00000037550)	VPS72 (ENSCPOG00000019331)
Naked mole-rat female	MODERN SPECIES	10	GOLPH3L (ENSHGLG00000042052) #16	HORMAD1 (ENSHGLG00000013087) #17	ENSHGLG00000038892 #18	ENSHGLG00000041980	ENSHGLG00000018535	HMGCS2 (ENSHGLG00000016719)	ENSHGLG00000016686	ENSHGLG00000032256	ENSHGLG00000046834	ENSHGLG00000036245	ENSHGLG00000041981	ENSHGLG00000011085 #19	ARNT (ENSHGLG00000005864) #20	ENSHGLG00000040159	CTXND2 (ENSHGLG00000046081) #21	SETDB1 (ENSHGLG00000011098) #22	CERS2 (ENSHGLG00000010168) #23	ENSHGLG00000012738 #24	MINDY1 (ENSHGLG00000011645) #25	PRUNE1 (ENSHGLG00000009857) #26	BNIPL (ENSHGLG00000008894) #27	CDC42SE1 (ENSHGLG00000007587) #30	ENSHGLG00000006929 #32	ENSHGLG00000033273	ENSHGLG00000005117 #33	SEMA6C (ENSHGLG00000007351) #34	TNFAIP8L2 (ENSHGLG00000005573) #35	LYSMD1 (ENSHGLG00000005177) #36	SCNM1 (ENSHGLG00000005098) #37	TMOD4 (ENSHGLG00000010575)	VPS72 (ENSHGLG00000009189)
Lagomorpha	ANCESTRAL SPECIES	1	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Rabbit	MODERN SPECIES	4	CIART (ENSOCUG00000009044)	ENSOCUG00000027120 #7	PRPF3 (ENSOCUG00000011760) #8	RPRD2 (ENSOCUG00000011770) #9	TARS2 (ENSOCUG00000031561) #10	ECM1 (ENSOCUG00000011786) #11	ADAMTSL4 (ENSOCUG00000000927) #13	MCL1 (ENSOCUG00000012152) #14	ENSOCUG00000003267 #15	GOLPH3L (ENSOCUG00000032306) #16	HORMAD1 (ENSOCUG00000003275) #17	CTSS (ENSOCUG00000011085) #18	CTSK (ENSOCUG00000011090) #19	ARNT (ENSOCUG00000013582) #20	CTXND2 (ENSOCUG00000030922) #21	SETDB1 (ENSOCUG00000003642) #22	CERS2 (ENSOCUG00000022419) #23	ANXA9 (ENSOCUG00000014955) #24	MINDY1 (ENSOCUG00000004694) #25	PRUNE1 (ENSOCUG00000004699) #26	BNIPL (ENSOCUG00000004704) #27	C1orf56 (ENSOCUG00000004709) #29	CDC42SE1 (ENSOCUG00000024314) #30	MLLT11 (ENSOCUG00000004821) #32	GABPB2 (ENSOCUG00000004712) #33	SEMA6C (ENSOCUG00000002736) #34	TNFAIP8L2 (ENSOCUG00000004719) #35	LYSMD1 (ENSOCUG00000004722) #36	SCNM1 (ENSOCUG00000026766) #37	TMOD4 (ENSOCUG00000020919)	VPS72 (ENSOCUG00000021424)
Pika	MODERN SPECIES	10062																SETDB1 (ENSOPRG00000015349) #22
Tree shrew	MODERN SPECIES	2122																SETDB1 (ENSTBEG00000009306) #22	CERS2 (ENSTBEG00000001240) #23	ANXA9 (ENSTBEG00000001691) #24	MINDY1 (ENSTBEG00000002408) #25	ENSTBEG00000004483 #26	BNIPL (ENSTBEG00000004916) #27	C1orf56 (ENSTBEG00000005461) #29	CDC42SE1 (ENSTBEG00000006266) #30	GABPB2 (ENSTBEG00000006499) #33	LYSMD1 (ENSTBEG00000006976) #36
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Artiodactyla	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Suina	ANCESTRAL SPECIES	8	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Pig	MODERN SPECIES	12	ENSSSCG00000052263 #7	PRPF3 (ENSSSCG00000030119) #8	RPRD2 (ENSSSCG00000030291) #9	TARS2 (ENSSSCG00000026395) #10	ECM1 (ENSSSCG00000029230) #11	ADAMTSL4 (ENSSSCG00000006651) #13	MCL1 (ENSSSCG00000039314) #14	ENSA (ENSSSCG00000006653) #15	ENSSSCG00000049503	GOLPH3L (ENSSSCG00000038558) #16	HORMAD1 (ENSSSCG00000006649) #17	CTSS (ENSSSCG00000006648) #18	CTSK (ENSSSCG00000052889) #19	ARNT (ENSSSCG00000006646) #20	CTXND2 (ENSSSCG00000057128) #21	SETDB1 (ENSSSCG00000006645) #22	CERS2 (ENSSSCG00000006644) #23	ANXA9 (ENSSSCG00000006643) #24	MINDY1 (ENSSSCG00000006642) #25	PRUNE1 (ENSSSCG00000006641) #26	BNIPL (ENSSSCG00000006640) #27	C1orf56 (ENSSSCG00000006639) #29	MLLT11 (ENSSSCG00000030278) #32	CDC42SE1 (ENSSSCG00000031881) #30	GABPB2 (ENSSSCG00000006636) #33	SEMA6C (ENSSSCG00000006635) #34	TNFAIP8L2 (ENSSSCG00000006634) #35	LYSMD1 (ENSSSCG00000020965) #36	SCNM1 (ENSSSCG00000006632) #37	TMOD4 (ENSSSCG00000006631)	VPS72 (ENSSSCG00000031869)
Chacoan peccary	MODERN SPECIES	29	CIART (ENSCWAG00000009100)	MRPS21 (ENSCWAG00000009071) #7	PRPF3 (ENSCWAG00000008995) #8	RPRD2 (ENSCWAG00000008913) #9	TARS2 (ENSCWAG00000008672) #10	ECM1 (ENSCWAG00000008573) #11	ADAMTSL4 (ENSCWAG00000008396) #13	MCL1 (ENSCWAG00000008263) #14	ENSCWAG00000008100 #15	GOLPH3L (ENSCWAG00000008042) #16	HORMAD1 (ENSCWAG00000007637) #17	CTSS (ENSCWAG00000007587) #18	CTSK (ENSCWAG00000007556) #19	ARNT (ENSCWAG00000007457) #20	CTXND2 (ENSCWAG00000007433) #21	SETDB1 (ENSCWAG00000007313) #22	CERS2 (ENSCWAG00000007281) #23	ANXA9 (ENSCWAG00000007232) #24	MINDY1 (ENSCWAG00000007209) #25	PRUNE1 (ENSCWAG00000007173) #26	BNIPL (ENSCWAG00000007128) #27	C1orf56 (ENSCWAG00000007095) #29	CDC42SE1 (ENSCWAG00000007079) #30	MLLT11 (ENSCWAG00000007068) #32	GABPB2 (ENSCWAG00000007044) #33	SEMA6C (ENSCWAG00000006983) #34	TNFAIP8L2 (ENSCWAG00000006959) #35	LYSMD1 (ENSCWAG00000006908) #36	SCNM1 (ENSCWAG00000006857) #37	TMOD4 (ENSCWAG00000006804)	VPS72 (ENSCWAG00000006762)
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Cetacea	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b.m #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112.o.a #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503	ENSGT00940000154703
Odontoceti	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b.m #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00390000016607.b #25	ENSGT00450000040262.f #26	ENSGT00450000040262.e.b #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112.o.a #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b.m #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00390000016607.b #25	ENSGT00450000040262.f #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112.o.a #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503	ENSGT00940000154703
Dolphin	MODERN SPECIES	769																SETDB1 (ENSTTRG00000006966) #22	CERS2 (ENSTTRG00000006978) #23	MINDY1 (ENSTTRG00000006986) #25	PRUNE1 (ENSTTRG00000006991) #26	BNIPL (ENSTTRG00000006994) #27	CDC42SE1 (ENSTTRG00000007000) #30	MLLT11 (ENSTTRG00000007002) #32	GABPB2 (ENSTTRG00000007003) #33	SEMA6C (ENSTTRG00000007007) #34	TNFAIP8L2 (ENSTTRG00000007009) #35	SCNM1 (ENSTTRG00000007011) #37	TMOD4 (ENSTTRG00000007013)	VPS72 (ENSTTRG00000007015)	PIP5K1A (ENSTTRG00000007016)	PSMD4 (ENSTTRG00000007019)	ZNF687 (ENSTTRG00000007020)
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b.m #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00390000016607.b #25	ENSGT00450000040262.f #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112.o.a #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503	ENSGT00940000154703
Monodontidae	ANCESTRAL SPECIES		ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b.m #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00950000183109.c.a.a.m.b.d	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00390000016607.b #25	ENSGT00450000040262.f #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112.o.a #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503	ENSGT00940000154703
Beluga whale	MODERN SPECIES	99	APH1A (ENSDLEG00000009850)	ENSDLEG00000009839	CIART (ENSDLEG00000009825)	MRPS21 (ENSDLEG00000009817) #7	PRPF3 (ENSDLEG00000009787) #8	RPRD2 (ENSDLEG00000009754) #9	ECM1 (ENSDLEG00000009658) #10	ADAMTSL4 (ENSDLEG00000009315) #13	MCL1 (ENSDLEG00000009251) #14	ENSA (ENSDLEG00000009232) #15	GOLPH3L (ENSDLEG00000009214) #16	CTSS (ENSDLEG00000009183) #18	CTSK (ENSDLEG00000009129) #19	ARNT (ENSDLEG00000008978) #20	ENSDLEG00000008940	SETDB1 (ENSDLEG00000008865) #22	CERS2 (ENSDLEG00000008736) #23	MINDY1 (ENSDLEG00000008706) #25	PRUNE1 (ENSDLEG00000008668) #26	BNIPL (ENSDLEG00000008485) #27	C1orf56 (ENSDLEG00000008441) #29	CDC42SE1 (ENSDLEG00000008403) #30	MLLT11 (ENSDLEG00000008383) #32	GABPB2 (ENSDLEG00000008303) #33	SEMA6C (ENSDLEG00000008123) #34	TNFAIP8L2 (ENSDLEG00000011599) #35	LYSMD1 (ENSDLEG00000011595) #36	SCNM1 (ENSDLEG00000011581) #37	TMOD4 (ENSDLEG00000011565)	VPS72 (ENSDLEG00000011554)	PIP5K1A (ENSDLEG00000011526)
Narwhal	MODERN SPECIES	304	MRPS21 (ENSMMNG00015004720) #7	PRPF3 (ENSMMNG00015004709) #8	RPRD2 (ENSMMNG00015004667) #9	TARS2 (ENSMMNG00015004626) #10	ECM1 (ENSMMNG00015004604) #11	ADAMTSL4 (ENSMMNG00015004588) #13	MCL1 (ENSMMNG00015004577) #14	ENSA (ENSMMNG00015004565) #15	GOLPH3L (ENSMMNG00015004555) #16	HORMAD1 (ENSMMNG00015004509) #17	CTSS (ENSMMNG00015004454) #18	CTSK (ENSMMNG00015004429) #19	ARNT (ENSMMNG00015004336) #20	ENSMMNG00015004305	CTXND2 (ENSMMNG00015004301) #21	SETDB1 (ENSMMNG00015004269) #22	CERS2 (ENSMMNG00015004250) #23	MINDY1 (ENSMMNG00015004226) #25	PRUNE1 (ENSMMNG00015004204) #26	BNIPL (ENSMMNG00015004189) #27	C1orf56 (ENSMMNG00015004180) #29	ENSMMNG00015004170 #30	MLLT11 (ENSMMNG00015004162) #32	GABPB2 (ENSMMNG00015004107) #33	SEMA6C (ENSMMNG00015003950) #34	TNFAIP8L2 (ENSMMNG00015003890) #35	LYSMD1 (ENSMMNG00015003872) #36	SCNM1 (ENSMMNG00015003851) #37	TMOD4 (ENSMMNG00015003815)	VPS72 (ENSMMNG00015003778)	PIP5K1A (ENSMMNG00015003697)
Vaquita	MODERN SPECIES		RPRD2 (ENSPSNG00000001899) #9	TARS2 (ENSPSNG00000001970) #10	ECM1 (ENSPSNG00000002059) #11	ADAMTSL4 (ENSPSNG00000002117) #13	MCL1 (ENSPSNG00000002164) #14	ENSPSNG00000002192 #15	GOLPH3L (ENSPSNG00000002225) #16	HORMAD1 (ENSPSNG00000002291) #17	ENSPSNG00000002431	CTSS (ENSPSNG00000002456) #18	ENSPSNG00000002497	CTSK (ENSPSNG00000002537) #19	ARNT (ENSPSNG00000002599) #20	ENSPSNG00000002663	CTXND2 (ENSPSNG00000002678) #21	SETDB1 (ENSPSNG00000002722) #22	CERS2 (ENSPSNG00000002789) #23	MINDY1 (ENSPSNG00000002812) #25	PRUNE1 (ENSPSNG00000002841) #26	BNIPL (ENSPSNG00000002869) #27	C1orf56 (ENSPSNG00000002883) #29	CDC42SE1 (ENSPSNG00000002899) #30	MLLT11 (ENSPSNG00000002930) #32	GABPB2 (ENSPSNG00000002981) #33	SEMA6C (ENSPSNG00000003085) #34	TNFAIP8L2 (ENSPSNG00000003213) #35	LYSMD1 (ENSPSNG00000003233) #36	SCNM1 (ENSPSNG00000003271) #37	TMOD4 (ENSPSNG00000003298)	VPS72 (ENSPSNG00000003334)	PIP5K1A (ENSPSNG00000003403)
Blue whale	MODERN SPECIES		PRPF3 (ENSBMSG00010014445) #8	RPRD2 (ENSBMSG00010014508) #9	TARS2 (ENSBMSG00010014680) #10	ECM1 (ENSBMSG00010014903) #11	ENSBMSG00010014950	ADAMTSL4 (ENSBMSG00010014975) #13	ENSBMSG00010015010 #14	ENSBMSG00010015076 #15	GOLPH3L (ENSBMSG00010015147) #16	HORMAD1 (ENSBMSG00010015193) #17	CTSS (ENSBMSG00010015415) #18	ENSBMSG00010015501	CTSK (ENSBMSG00010015531) #19	ARNT (ENSBMSG00010015560) #20	CTXND2 (ENSBMSG00010015619) #21	SETDB1 (ENSBMSG00010015648) #22	CERS2 (ENSBMSG00010015712) #23	MINDY1 (ENSBMSG00010015736) #25	PRUNE1 (ENSBMSG00010015772) #26	BNIPL (ENSBMSG00010015820) #27	C1orf56 (ENSBMSG00010015857) #29	ENSBMSG00010015864 #30	MLLT11 (ENSBMSG00010015877) #32	GABPB2 (ENSBMSG00010015897) #33	SEMA6C (ENSBMSG00010015964) #34	TNFAIP8L2 (ENSBMSG00010016214) #35	LYSMD1 (ENSBMSG00010016236) #36	SCNM1 (ENSBMSG00010016290) #37	TMOD4 (ENSBMSG00010016336)	VPS72 (ENSBMSG00010016387)	PIP5K1A (ENSBMSG00010016429)
Pecora	ANCESTRAL SPECIES	2	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Percora_a	ANCESTRAL SPECIES	1	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000154555.a.a.b	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Bovidae	ANCESTRAL SPECIES	1	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000154555.a.a.b	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Caprinae	ANCESTRAL SPECIES	2	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000003316.d.g.a.b.a.a	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000154555.a.a.b	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00910000146771 #31	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Goat	MODERN SPECIES	22	RPRD2 (ENSCHIG00000023733) #9	TARS2 (ENSCHIG00000018559) #10	ECM1 (ENSCHIG00000010881) #11	ENSCHIG00000025006	ENSCHIG00000011166	ADAMTSL4 (ENSCHIG00000024595) #13	MCL1 (ENSCHIG00000027012) #14	ENSA (ENSCHIG00000011483) #15	ENSCHIG00000017930 #16	ENSCHIG00000006760	HORMAD1 (ENSCHIG00000010871) #17	CTSS (ENSCHIG00000022768) #18	ENSCHIG00000012927	CTSK (ENSCHIG00000011574) #19	ARNT (ENSCHIG00000012451) #20	SETDB1 (ENSCHIG00000010698) #22	CERS2 (ENSCHIG00000023499) #23	ANXA9 (ENSCHIG00000024087) #24	MINDY1 (ENSCHIG00000018101) #25	PRUNE1 (ENSCHIG00000011605) #26	BNIPL (ENSCHIG00000025222) #27	CDC42SE1 (ENSCHIG00000009064) #30	ENSCHIG00000010765 #31	MLLT11 (ENSCHIG00000001570) #32	GABPB2 (ENSCHIG00000017762) #33	SEMA6C (ENSCHIG00000027158) #34	TNFAIP8L2 (ENSCHIG00000008444) #35	LYSMD1 (ENSCHIG00000025538) #36	SCNM1 (ENSCHIG00000014264) #37	TMOD4 (ENSCHIG00000023166)	VPS72 (ENSCHIG00000014800)
Rambouillet Sheep	MODERN SPECIES		RPRD2 (ENSOARG00020008088) #9	TARS2 (ENSOARG00020008324) #10	ECM1 (ENSOARG00020008539) #11	ADAMTSL4 (ENSOARG00020008616) #13	MCL1 (ENSOARG00020008725) #14	ENSA (ENSOARG00020008758) #15	GOLPH3L (ENSOARG00020008878) #16	ENSOARG00020008922	HORMAD1 (ENSOARG00020008996) #17	CTSS (ENSOARG00020009546) #18	ENSOARG00020009638	CTSK (ENSOARG00020009669) #19	ARNT (ENSOARG00020009727) #20	ENSOARG00020011070	CTXND2 (ENSOARG00020011105) #21	SETDB1 (ENSOARG00020011148) #22	CERS2 (ENSOARG00020011401) #23	ANXA9 (ENSOARG00020011475) #24	MINDY1 (ENSOARG00020011596) #25	PRUNE1 (ENSOARG00020011679) #26	BNIPL (ENSOARG00020011956) #27	C1orf56 (ENSOARG00020011990) #29	CDC42SE1 (ENSOARG00020012045) #30	MLLT11 (ENSOARG00020012089) #32	GABPB2 (ENSOARG00020012123) #33	SEMA6C (ENSOARG00020012397) #34	TNFAIP8L2 (ENSOARG00020013414) #35	LYSMD1 (ENSOARG00020013436) #36	SCNM1 (ENSOARG00020013488) #37	TMOD4 (ENSOARG00020013556)	VPS72 (ENSOARG00020013630)
Bovinae	ANCESTRAL SPECIES	1	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000154555.a.a.b	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Bos	ANCESTRAL SPECIES		ENSGT00390000011497 #8	ENSGT01100000263480.a.a.b.a.b.b.b.b.b	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000154555.a.a.b	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Bos_a	ANCESTRAL SPECIES	47	ENSGT00390000011497 #8	ENSGT01100000263480.a.a.b.a.b.b.b.b.b	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000154555.a.a.b	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Wild yak	MODERN SPECIES	688	MRPS21 (ENSBMUG00000023447) #7	PRPF3 (ENSBMUG00000023465) #8	RPRD2 (ENSBMUG00000023488) #9	TARS2 (ENSBMUG00000023540) #10	ECM1 (ENSBMUG00000023627) #11	ADAMTSL4 (ENSBMUG00000023675) #13	MCL1 (ENSBMUG00000023701) #14	ENSA (ENSBMUG00000023727) #15	GOLPH3L (ENSBMUG00000023736) #16	HORMAD1 (ENSBMUG00000023788) #17	CTSS (ENSBMUG00000023817) #18	ENSBMUG00000023823	CTSK (ENSBMUG00000023829) #19	ARNT (ENSBMUG00000023892) #20	CTXND2 (ENSBMUG00000023928) #21	SETDB1 (ENSBMUG00000023958) #22	CERS2 (ENSBMUG00000023975) #23	ANXA9 (ENSBMUG00000023991) #24	MINDY1 (ENSBMUG00000024003) #25	PRUNE1 (ENSBMUG00000024019) #26	BNIPL (ENSBMUG00000024035) #27	C1orf56 (ENSBMUG00000024042) #29	CDC42SE1 (ENSBMUG00000024051) #30	MLLT11 (ENSBMUG00000024057) #32	GABPB2 (ENSBMUG00000024085) #33	SEMA6C (ENSBMUG00000024160) #34	TNFAIP8L2 (ENSBMUG00000024178) #35	LYSMD1 (ENSBMUG00000024179) #36	SCNM1 (ENSBMUG00000024189) #37	TMOD4 (ENSBMUG00000024204)	VPS72 (ENSBMUG00000024221)
Domestic yak	MODERN SPECIES	22	ENSBGRG00000000401	RPRD2 (ENSBGRG00000000422) #9	ENSBGRG00000000495	TARS2 (ENSBGRG00000000557) #10	ECM1 (ENSBGRG00000000897) #11	ADAMTSL4 (ENSBGRG00000000934) #13	MCL1 (ENSBGRG00000000962) #14	ENSA (ENSBGRG00000001008) #15	ENSBGRG00000001073 #16	HORMAD1 (ENSBGRG00000001109) #17	ENSBGRG00000001219	ENSBGRG00000001228	CTSK (ENSBGRG00000001240) #19	ARNT (ENSBGRG00000001283) #20	CTXND2 (ENSBGRG00000001358) #21	SETDB1 (ENSBGRG00000001377) #22	CERS2 (ENSBGRG00000001419) #23	ANXA9 (ENSBGRG00000001440) #24	MINDY1 (ENSBGRG00000001466) #25	PRUNE1 (ENSBGRG00000001499) #26	BNIPL (ENSBGRG00000001530) #27	C1orf56 (ENSBGRG00000001556) #29	CDC42SE1 (ENSBGRG00000001575) #30	MLLT11 (ENSBGRG00000001584) #32	GABPB2 (ENSBGRG00000001610) #33	SEMA6C (ENSBGRG00000001699) #34	TNFAIP8L2 (ENSBGRG00000001735) #35	LYSMD1 (ENSBGRG00000001747) #36	SCNM1 (ENSBGRG00000001758) #37	TMOD4 (ENSBGRG00000001770)	VPS72 (ENSBGRG00000001785)
Bos_b	ANCESTRAL SPECIES	1	ENSGT00390000011497 #8	ENSGT01100000263480.a.a.b.a.b.b.b.b.b	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b.o #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000154555.a.a.b	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Cow	MODERN SPECIES	22	CIART (ENSBTAG00000021487)	MRPS21 (ENSBTAG00000024378) #7	PRPF3 (ENSBTAG00000013946) #8	RPRD2 (ENSBTAG00000014984) #9	TARS2 (ENSBTAG00000003799) #10	ECM1 (ENSBTAG00000003806) #11	ADAMTSL4 (ENSBTAG00000003604) #13	MCL1 (ENSBTAG00000015154) #14	ENSA (ENSBTAG00000007123) #15	GOLPH3L (ENSBTAG00000020357) #16	HORMAD1 (ENSBTAG00000002724) #17	CTSS (ENSBTAG00000017135) #18	ENSBTAG00000050340	CTSK (ENSBTAG00000021035) #19	ARNT (ENSBTAG00000021037) #20	SETDB1 (ENSBTAG00000000098) #22	CERS2 (ENSBTAG00000000099) #23	ANXA9 (ENSBTAG00000015304) #24	MINDY1 (ENSBTAG00000015329) #25	PRUNE1 (ENSBTAG00000015336) #26	BNIPL (ENSBTAG00000015345) #27	C3H1orf56 (ENSBTAG00000015349) #29	MLLT11 (ENSBTAG00000015369) #32	GABPB2 (ENSBTAG00000015371) #33	SEMA6C (ENSBTAG00000007281) #34	TNFAIP8L2 (ENSBTAG00000020394) #35	LYSMD1 (ENSBTAG00000020395) #36	SCNM1 (ENSBTAG00000018070) #37	TMOD4 (ENSBTAG00000018071)	VPS72 (ENSBTAG00000018074)	PIP5K1A (ENSBTAG00000006099)
Hybrid Bos Indicus	MODERN SPECIES	22	CIART (ENSBIXG00005026269)	MRPS21 (ENSBIXG00005004483) #7	PRPF3 (ENSBIXG00005026388) #8	ENSBIXG00005026407	RPRD2 (ENSBIXG00005004524) #9	TARS2 (ENSBIXG00005007645) #10	ADAMTSL4 (ENSBIXG00005026752) #13	ENSBIXG00005026789 #14	ENSA (ENSBIXG00005026915) #15	GOLPH3L (ENSBIXG00005004612) #16	HORMAD1 (ENSBIXG00005027115) #17	ENSBIXG00005027168	CTSK (ENSBIXG00005027189) #19	ARNT (ENSBIXG00005006942) #20	CTXND2 (ENSBIXG00005027316) #21	SETDB1 (ENSBIXG00005027385) #22	CERS2 (ENSBIXG00005027450) #23	ANXA9 (ENSBIXG00005007589) #24	MINDY1 (ENSBIXG00005027538) #25	PRUNE1 (ENSBIXG00005027606) #26	BNIPL (ENSBIXG00005027654) #27	C1orf56 (ENSBIXG00005027664) #29	CDC42SE1 (ENSBIXG00005027674) #30	MLLT11 (ENSBIXG00005004758) #32	GABPB2 (ENSBIXG00005027729) #33	SEMA6C (ENSBIXG00005027801) #34	TNFAIP8L2 (ENSBIXG00005027841) #35	LYSMD1 (ENSBIXG00005027861) #36	SCNM1 (ENSBIXG00005027892) #37	TMOD4 (ENSBIXG00005027928)	VPS72 (ENSBIXG00005027956)
American bison	MODERN SPECIES	3032	MRPS21 (ENSBBBG00000023564) #7	PRPF3 (ENSBBBG00000023595) #8	RPRD2 (ENSBBBG00000023635) #9	TARS2 (ENSBBBG00000023752) #10	ECM1 (ENSBBBG00000023801) #11	ADAMTSL4 (ENSBBBG00000008423) #13	MCL1 (ENSBBBG00000023859) #14	ENSA (ENSBBBG00000023921) #15	ENSBBBG00000023935 #16	HORMAD1 (ENSBBBG00000024026) #17	CTSS (ENSBBBG00000024064) #18	ENSBBBG00000006254	CTSK (ENSBBBG00000006256) #19	ARNT (ENSBBBG00000024242) #20	CTXND2 (ENSBBBG00000006318) #21	SETDB1 (ENSBBBG00000006339) #22	CERS2 (ENSBBBG00000006357) #23	ANXA9 (ENSBBBG00000024438) #24	MINDY1 (ENSBBBG00000024479) #25	PRUNE1 (ENSBBBG00000000262) #26	BNIPL (ENSBBBG00000024535) #27	C1orf56 (ENSBBBG00000006397) #29	CDC42SE1 (ENSBBBG00000024557) #30
Siberian musk deer	MODERN SPECIES	247	PRPF3 (ENSMMSG00000020222) #8	RPRD2 (ENSMMSG00000020110) #9	TARS2 (ENSMMSG00000019987) #10	ECM1 (ENSMMSG00000019915) #11	ADAMTSL4 (ENSMMSG00000019809) #13	MCL1 (ENSMMSG00000019746) #14	ENSA (ENSMMSG00000019666) #15	ENSMMSG00000019621	ENSMMSG00000019604 #16	HORMAD1 (ENSMMSG00000019531) #17	CTSS (ENSMMSG00000019442) #18	ENSMMSG00000019418	CTSK (ENSMMSG00000019381) #19	ARNT (ENSMMSG00000019310) #20	CTXND2 (ENSMMSG00000019290) #21	SETDB1 (ENSMMSG00000019191) #22	CERS2 (ENSMMSG00000019147) #23	ANXA9 (ENSMMSG00000019107) #24	MINDY1 (ENSMMSG00000019051) #25	PRUNE1 (ENSMMSG00000018956) #26	BNIPL (ENSMMSG00000018916) #27	C1orf56 (ENSMMSG00000018885) #29	ENSMMSG00000018858 #30	MLLT11 (ENSMMSG00000018852) #32	GABPB2 (ENSMMSG00000018775) #33	SEMA6C (ENSMMSG00000018695) #34	TNFAIP8L2 (ENSMMSG00000018650) #35	LYSMD1 (ENSMMSG00000018627) #36	SCNM1 (ENSMMSG00000018590) #37	TMOD4 (ENSMMSG00000018543)	VPS72 (ENSMMSG00000018503)
Yarkand deer	MODERN SPECIES	12	CIART (ENSCHYG00000012538)	ENSCHYG00000012484 #7	PRPF3 (ENSCHYG00000012362) #8	RPRD2 (ENSCHYG00000012167) #9	TARS2 (ENSCHYG00000011458) #10	ECM1 (ENSCHYG00000011225) #11	ADAMTSL4 (ENSCHYG00000010890) #13	MCL1 (ENSCHYG00000010763) #14	ENSCHYG00000010464 #15	GOLPH3L (ENSCHYG00000010384) #16	HORMAD1 (ENSCHYG00000010140) #17	CTSS (ENSCHYG00000009944) #18	CTSK (ENSCHYG00000009848) #19	ARNT (ENSCHYG00000009373) #20	CTXND2 (ENSCHYG00000009233) #21	SETDB1 (ENSCHYG00000008840) #22	CERS2 (ENSCHYG00000008620) #23	ANXA9 (ENSCHYG00000008588) #24	MINDY1 (ENSCHYG00000008523) #25	PRUNE1 (ENSCHYG00000008341) #26	BNIPL (ENSCHYG00000008308) #27	C1orf56 (ENSCHYG00000008299) #29	CDC42SE1 (ENSCHYG00000008283) #30	ENSCHYG00000008272 #32	GABPB2 (ENSCHYG00000008209) #33	SEMA6C (ENSCHYG00000008002) #34	TNFAIP8L2 (ENSCHYG00000007962) #35	LYSMD1 (ENSCHYG00000007945) #36	SCNM1 (ENSCHYG00000007917) #37	TMOD4 (ENSCHYG00000007877)	ENSCHYG00000007817
Camelidae	ANCESTRAL SPECIES	6	ENSGT00390000003103	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Arabian camel	MODERN SPECIES	13	ENSCDRG00005016574	CIART (ENSCDRG00005016658)	ENSCDRG00005016696 #7	PRPF3 (ENSCDRG00005016744) #8	RPRD2 (ENSCDRG00005016821) #9	TARS2 (ENSCDRG00005017096) #10	ECM1 (ENSCDRG00005017209) #11	ADAMTSL4 (ENSCDRG00005017304) #13	MCL1 (ENSCDRG00005017360) #14	ENSA (ENSCDRG00005017421) #15	GOLPH3L (ENSCDRG00005017458) #16	HORMAD1 (ENSCDRG00005017527) #17	CTSS (ENSCDRG00005017707) #18	CTSK (ENSCDRG00005017757) #19	ARNT (ENSCDRG00005017808) #20	SETDB1 (ENSCDRG00005018003) #22	CERS2 (ENSCDRG00005018124) #23	ANXA9 (ENSCDRG00005018156) #24	MINDY1 (ENSCDRG00005018219) #25	PRUNE1 (ENSCDRG00005018303) #26	BNIPL (ENSCDRG00005018369) #27	C1orf56 (ENSCDRG00005018387) #29	CDC42SE1 (ENSCDRG00005018416) #30	MLLT11 (ENSCDRG00005008910) #32	GABPB2 (ENSCDRG00005008942) #33	SEMA6C (ENSCDRG00005009095) #34	TNFAIP8L2 (ENSCDRG00005009207) #35	LYSMD1 (ENSCDRG00005009227) #36	SCNM1 (ENSCDRG00005009273) #37	TMOD4 (ENSCDRG00005009355)	VPS72 (ENSCDRG00005009442)
Alpaca	MODERN SPECIES	2206	ENSVPAG00000005423	CIART (ENSVPAG00000005424)	MRPS21 (ENSVPAG00000015525) #7	ENSVPAG00000015489	PRPF3 (ENSVPAG00000005425) #8	RPRD2 (ENSVPAG00000005426) #9	TARS2 (ENSVPAG00000005427) #10	ENSVPAG00000005428	MCL1 (ENSVPAG00000005430) #14	ENSA (ENSVPAG00000005431) #15	GOLPH3L (ENSVPAG00000005432) #16	HORMAD1 (ENSVPAG00000005435) #17	CTSS (ENSVPAG00000005436) #18	CTSK (ENSVPAG00000005437) #19	ARNT (ENSVPAG00000005439) #20	SETDB1 (ENSVPAG00000005440) #22
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Carnivora	ANCESTRAL SPECIES	1	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Caniformia	ANCESTRAL SPECIES	31	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Caniformia_b	ANCESTRAL SPECIES	35	ENSGT00390000003103	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Ursidae	ANCESTRAL SPECIES		ENSGT00390000003103	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Ursus	ANCESTRAL SPECIES	18	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00950000186073	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
American black bear	MODERN SPECIES	3555													ENSUAMG00000026728 #20	ENSUAMG00000026727 #20	ENSUAMG00000026726	SETDB1 (ENSUAMG00000026724) #22	CERS2 (ENSUAMG00000026723) #23
Polar bear	MODERN SPECIES	193	C1orf54 (ENSUMAG00000003742)	CIART (ENSUMAG00000003740)	MRPS21 (ENSUMAG00000003735) #7	PRPF3 (ENSUMAG00000003720) #8	RPRD2 (ENSUMAG00000003712) #9	TARS2 (ENSUMAG00000003705) #10	ECM1 (ENSUMAG00000003701) #11	ADAMTSL4 (ENSUMAG00000003512) #13	ENSA (ENSUMAG00000003476) #15	GOLPH3L (ENSUMAG00000003469) #16	HORMAD1 (ENSUMAG00000003454) #17	CTSS (ENSUMAG00000003442) #18	ENSUMAG00000003430	CTSK (ENSUMAG00000003426) #19	ARNT (ENSUMAG00000003392) #20	SETDB1 (ENSUMAG00000003141) #22	CERS2 (ENSUMAG00000003094) #23	ANXA9 (ENSUMAG00000003084) #24	MINDY1 (ENSUMAG00000003075) #25	PRUNE1 (ENSUMAG00000003066) #26	BNIPL (ENSUMAG00000003048) #27	C1orf56 (ENSUMAG00000003044) #29	CDC42SE1 (ENSUMAG00000003032) #30	MLLT11 (ENSUMAG00000003030) #32	GABPB2 (ENSUMAG00000003028) #33	SEMA6C (ENSUMAG00000002709) #34	LYSMD1 (ENSUMAG00000002659) #36	SCNM1 (ENSUMAG00000002656) #37	TMOD4 (ENSUMAG00000002565)	VPS72 (ENSUMAG00000002554)	PIP5K1A (ENSUMAG00000002546)
Giant Panda	MODERN SPECIES	11	C1orf54 (ENSAMEG00000001725)	CIART (ENSAMEG00000001706)	MRPS21 (ENSAMEG00000001703) #7	PRPF3 (ENSAMEG00000001630) #8	RPRD2 (ENSAMEG00000001598) #9	TARS2 (ENSAMEG00000001547) #10	ECM1 (ENSAMEG00000001502) #11	ADAMTSL4 (ENSAMEG00000001424) #13	MCL1 (ENSAMEG00000001399) #14	ENSA (ENSAMEG00000001375) #15	GOLPH3L (ENSAMEG00000030641) #16	HORMAD1 (ENSAMEG00000001321) #17	ENSAMEG00000001264 #18	ARNT (ENSAMEG00000001200) #20	ENSAMEG00000011643	SETDB1 (ENSAMEG00000001160) #22	CERS2 (ENSAMEG00000001115) #23	ANXA9 (ENSAMEG00000001101) #24	MINDY1 (ENSAMEG00000001070) #25	PRUNE1 (ENSAMEG00000001056) #26	BNIPL (ENSAMEG00000000980) #27	C1orf56 (ENSAMEG00000024447) #29	CDC42SE1 (ENSAMEG00000000978) #30	MLLT11 (ENSAMEG00000019143) #32	GABPB2 (ENSAMEG00000000961) #33	SEMA6C (ENSAMEG00000000929) #34	TNFAIP8L2 (ENSAMEG00000019127) #35	LYSMD1 (ENSAMEG00000000925) #36	SCNM1 (ENSAMEG00000000911) #37	TMOD4 (ENSAMEG00000000834)	VPS72 (ENSAMEG00000000824)
Mustelinae	ANCESTRAL SPECIES	81	ENSGT00390000003103	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
American mink	MODERN SPECIES	316	MRPS21 (ENSNVIG00000016967) #7	PRPF3 (ENSNVIG00000016938) #8	RPRD2 (ENSNVIG00000016878) #9	TARS2 (ENSNVIG00000016668) #10	ECM1 (ENSNVIG00000016576) #11	ADAMTSL4 (ENSNVIG00000016514) #13	MCL1 (ENSNVIG00000016500) #14	ENSA (ENSNVIG00000016441) #15	GLP3L (ENSNVIG00000016426) #16	HORMAD1 (ENSNVIG00000016390) #17	CTSS (ENSNVIG00000016354) #18	CATK (ENSNVIG00000016339) #19	ARNT (ENSNVIG00000016210) #20	ENSNVIG00000016187	CTXND2 (ENSNVIG00000016170) #21	SETDB1 (ENSNVIG00000016086) #22	CERS2 (ENSNVIG00000016039) #23	ANXA9 (ENSNVIG00000016007) #24	MINDY1 (ENSNVIG00000015928) #25	PRUNE1 (ENSNVIG00000015904) #26	BNIPL (ENSNVIG00000015873) #27	C1orf56 (ENSNVIG00000015864) #29	CDC42SE1 (ENSNVIG00000015858) #30	GABPB2 (ENSNVIG00000015834) #33	SEMA6C (ENSNVIG00000015653) #34	TNFAIP8L2 (ENSNVIG00000015633) #35	LYSM1 (ENSNVIG00000015619) #36	SCNM1 (ENSNVIG00000015600) #37	TMOD4 (ENSNVIG00000015581)	VPS72 (ENSNVIG00000015557)	PIP5K1A (ENSNVIG00000015442)
Ferret	MODERN SPECIES	398	CIART (ENSMPUG00000005224)	MRPS21 (ENSMPUG00000005221) #7	PRPF3 (ENSMPUG00000005080) #8	RPRD2 (ENSMPUG00000005032) #9	TARS2 (ENSMPUG00000004795) #10	ECM1 (ENSMPUG00000004712) #11	ADAMTSL4 (ENSMPUG00000004691) #13	MCL1 (ENSMPUG00000004683) #14	ENSA (ENSMPUG00000004647) #15	GOLPH3L (ENSMPUG00000004608) #16	HORMAD1 (ENSMPUG00000004562) #17	CTSS (ENSMPUG00000004552) #18	ENSMPUG00000004471	CTSK (ENSMPUG00000004373) #19	ARNT (ENSMPUG00000004365) #20	SETDB1 (ENSMPUG00000004298) #22	CERS2 (ENSMPUG00000004292) #23	ANXA9 (ENSMPUG00000004217) #24	MINDY1 (ENSMPUG00000004209) #25	PRUNE1 (ENSMPUG00000004205) #26	BNIPL (ENSMPUG00000004137) #27	C1orf56 (ENSMPUG00000004134) #29	MLLT11 (ENSMPUG00000018421) #32	GABPB2 (ENSMPUG00000004074) #33	SEMA6C (ENSMPUG00000004065) #34	TNFAIP8L2 (ENSMPUG00000004060) #35	LYSMD1 (ENSMPUG00000004055) #36	SCNM1 (ENSMPUG00000004051) #37	TMOD4 (ENSMPUG00000004039)	VPS72 (ENSMPUG00000004027)	PIP5K1A (ENSMPUG00000003887)
Canidae	ANCESTRAL SPECIES	18	ENSGT00390000018360	ENSGT00500000045038.k #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00390000018360	ENSGT00500000045038.k #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Dog	MODERN SPECIES	8	CIART (ENSCAFG00845016855)	MRPS21 (ENSCAFG00845016904) #7	PRPF3 (ENSCAFG00845017034) #8	RPRD2 (ENSCAFG00845017196) #9	TARS2 (ENSCAFG00845017490) #10	ECM1 (ENSCAFG00845018089) #11	ADAMTSL4 (ENSCAFG00845018385) #13	MCL1 (ENSCAFG00845018496) #14	ENSA (ENSCAFG00845018577) #15	GOLPH3L (ENSCAFG00845018671) #16	HORMAD1 (ENSCAFG00845018896) #17	CTSS (ENSCAFG00845019241) #18	CTSK (ENSCAFG00845019461) #19	ARNT (ENSCAFG00845019671) #20	CTXND2 (ENSCAFG00845020148) #21	SETDB1 (ENSCAFG00845020216) #22	CERS2 (ENSCAFG00845020459) #23	ANXA9 (ENSCAFG00845020549) #24	MINDY1 (ENSCAFG00845020685) #25	PRUNE1 (ENSCAFG00845020879) #26	BNIPL (ENSCAFG00845021092) #27	C1orf56 (ENSCAFG00845021195) #29	MLLT11 (ENSCAFG00845021250) #32	GABPB2 (ENSCAFG00845021379) #33	SEMA6C (ENSCAFG00845021515) #34	TNFAIP8L2 (ENSCAFG00845021939) #35	LYSMD1 (ENSCAFG00845021963) #36	SCNM1 (ENSCAFG00845022000) #37	TMOD4 (ENSCAFG00845022073)	VPS72 (ENSCAFG00845022136)	PIP5K1A (ENSCAFG00845022223)
Dingo	MODERN SPECIES	223	C1orf54 (ENSCAFG00020019667)	CIART (ENSCAFG00020019665)	MRPS21 (ENSCAFG00020019663) #7	PRPF3 (ENSCAFG00020019653) #8	RPRD2 (ENSCAFG00020019619) #9	TARS2 (ENSCAFG00020019615) #10	ECM1 (ENSCAFG00020019611) #11	ADAMTSL4 (ENSCAFG00020019552) #13	MCL1 (ENSCAFG00020019541) #14	ENSA (ENSCAFG00020019539) #15	GOLPH3L (ENSCAFG00020019538) #16	HORMAD1 (ENSCAFG00020019532) #17	CTSS (ENSCAFG00020019528) #18	CTSK (ENSCAFG00020019521) #19	ARNT (ENSCAFG00020014304) #20	SETDB1 (ENSCAFG00020013596) #22	CERS2 (ENSCAFG00020013567) #23	ANXA9 (ENSCAFG00020013531) #24	MINDY1 (ENSCAFG00020013527) #25	PRUNE1 (ENSCAFG00020013525) #26	BNIPL (ENSCAFG00020013521) #27	C1orf56 (ENSCAFG00020013517) #29	CDC42SE1 (ENSCAFG00020013513) #30	MLLT11 (ENSCAFG00020013511) #32	GABPB2 (ENSCAFG00020013493) #33	SEMA6C (ENSCAFG00020013490) #34	TNFAIP8L2 (ENSCAFG00020013486) #35	LYSMD1 (ENSCAFG00020013482) #36	SCNM1 (ENSCAFG00020013477) #37	TMOD4 (ENSCAFG00020013465)	ENSCAFG00020013463
Red fox	MODERN SPECIES	176	CIART (ENSVVUG00000007857)	MRPS21 (ENSVVUG00000007865) #7	PRPF3 (ENSVVUG00000007933) #8	RPRD2 (ENSVVUG00000009075) #9	TARS2 (ENSVVUG00000009226) #10	ECM1 (ENSVVUG00000011492) #11	ENSVVUG00000011504	ADAMTSL4 (ENSVVUG00000011516) #13	MCL1 (ENSVVUG00000011532) #14	ENSA (ENSVVUG00000011538) #15	ENSVVUG00000011548 #16	CTSS (ENSVVUG00000011558) #18	CTSK (ENSVVUG00000011566) #19	ARNT (ENSVVUG00000011582) #20	ENSVVUG00000011618	SETDB1 (ENSVVUG00000011637) #22	CERS2 (ENSVVUG00000011653) #23	ANXA9 (ENSVVUG00000011665) #24	MINDY1 (ENSVVUG00000011699) #25	PRUNE1 (ENSVVUG00000011711) #26	BNIPL (ENSVVUG00000011719) #27	C1orf56 (ENSVVUG00000011731) #29	CDC42SE1 (ENSVVUG00000011739) #30	MLLT11 (ENSVVUG00000011750) #32	GABPB2 (ENSVVUG00000011753) #33	SEMA6C (ENSVVUG00000011791) #34	TNFAIP8L2 (ENSVVUG00000012677) #35	LYSMD1 (ENSVVUG00000012681) #36	SCNM1 (ENSVVUG00000012685) #37	TMOD4 (ENSVVUG00000012692)	VPS72 (ENSVVUG00000012757)
Felidae	ANCESTRAL SPECIES	10	ENSGT00500000045038.n #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00390000009588.fb.b	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Panthera	ANCESTRAL SPECIES	40	ENSGT00500000045038.n.a #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00390000009588.fb.b	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Panthera_a	ANCESTRAL SPECIES	38	ENSGT00500000045038.n.a #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00390000009588.fb.b	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
leopard	MODERN SPECIES	149	PRPF3 (ENSPPRG00000000731) #8	ENSPPRG00000000561	RPRD2 (ENSPPRG00000000487) #9	TARS2 (ENSPPRG00000019975) #10	ECM1 (ENSPPRG00000013966) #11	ADAMTSL4 (ENSPPRG00000012710) #13	MCL1 (ENSPPRG00000011968) #14	ENSPPRG00000011393 #15	GOLPH3L (ENSPPRG00000010135) #16	HORMAD1 (ENSPPRG00000010018) #17	CTSS (ENSPPRG00000008620) #18	CTSK (ENSPPRG00000008091) #19	ARNT (ENSPPRG00000007894) #20	ENSPPRG00000006841	CTXND2 (ENSPPRG00000015884) #21	SETDB1 (ENSPPRG00000005462) #22	CERS2 (ENSPPRG00000003137) #23	ANXA9 (ENSPPRG00000003017) #24	MINDY1 (ENSPPRG00000002925) #25	PRUNE1 (ENSPPRG00000002301) #26	BNIPL (ENSPPRG00000001137) #27	C1orf56 (ENSPPRG00000000789) #29	CDC42SE1 (ENSPPRG00000000753) #30	MLLT11 (ENSPPRG00000015706) #32	GABPB2 (ENSPPRG00000021737) #33	SEMA6C (ENSPPRG00000016004) #34	TNFAIP8L2 (ENSPPRG00000015393) #35	LYSMD1 (ENSPPRG00000009376) #36	SCNM1 (ENSPPRG00000008819) #37	TMOD4 (ENSPPRG00000008141)	VPS72 (ENSPPRG00000008110)
lion	MODERN SPECIES	8	CIART (ENSPLOG00000018806)	ENSPLOG00000018890 #7	PRPF3 (ENSPLOG00000018919) #8	RPRD2 (ENSPLOG00000018951) #9	TARS2 (ENSPLOG00000019042) #10	ECM1 (ENSPLOG00000019469) #11	ADAMTSL4 (ENSPLOG00000019514) #13	MCL1 (ENSPLOG00000019623) #14	ENSPLOG00000019678 #15	GOLPH3L (ENSPLOG00000019714) #16	HORMAD1 (ENSPLOG00000019828) #17	CTSK (ENSPLOG00000020110) #19	ARNT (ENSPLOG00000020141) #20	ENSPLOG00000020188	CTXND2 (ENSPLOG00000020213) #21	SETDB1 (ENSPLOG00000020237) #22	CERS2 (ENSPLOG00000020309) #23	ANXA9 (ENSPLOG00000020367) #24	MINDY1 (ENSPLOG00000020401) #25	PRUNE1 (ENSPLOG00000020473) #26	BNIPL (ENSPLOG00000020559) #27	C1orf56 (ENSPLOG00000020617) #29	CDC42SE1 (ENSPLOG00000020633) #30	MLLT11 (ENSPLOG00000020660) #32	GABPB2 (ENSPLOG00000020686) #33	SEMA6C (ENSPLOG00000020778) #34	TNFAIP8L2 (ENSPLOG00000021032) #35	LYSMD1 (ENSPLOG00000021058) #36	SCNM1 (ENSPLOG00000021105) #37	TMOD4 (ENSPLOG00000021143)	VPS72 (ENSPLOG00000021188)
Tiger	MODERN SPECIES	275	ENSPTIG00000003850 #7	PRPF3 (ENSPTIG00000005516) #8	RPRD2 (ENSPTIG00000006304) #9	TARS2 (ENSPTIG00000008079) #10	ECM1 (ENSPTIG00000012717) #11	ADAMTSL4 (ENSPTIG00000015181) #13	MCL1 (ENSPTIG00000016268) #14	ENSA (ENSPTIG00000016622) #15	GOLPH3L (ENSPTIG00000019004) #16	HORMAD1 (ENSPTIG00000019960) #17	CTSS (ENSPTIG00000001310) #18	CTSK (ENSPTIG00000004636) #19	ARNT (ENSPTIG00000006152) #20	ENSPTIG00000012578	CTXND2 (ENSPTIG00000005780) #21	SETDB1 (ENSPTIG00000014233) #22	CERS2 (ENSPTIG00000018998) #23	ANXA9 (ENSPTIG00000021585) #24	MINDY1 (ENSPTIG00000000898) #25	PRUNE1 (ENSPTIG00000003242) #26	BNIPL (ENSPTIG00000007131) #27	C1orf56 (ENSPTIG00000008272) #29	CDC42SE1 (ENSPTIG00000008491) #30	MLLT11 (ENSPTIG00000005928) #32	GABPB2 (ENSPTIG00000009109) #33	ENSPTIG00000009931 #34	TNFAIP8L2 (ENSPTIG00000005950) #35	LYSMD1 (ENSPTIG00000011723) #36	SCNM1 (ENSPTIG00000012793) #37	TMOD4 (ENSPTIG00000013183)	VPS72 (ENSPTIG00000013626)
Cat	MODERN SPECIES	239	CIART (ENSFCAG00000013937)	ENSFCAG00000034082 #7	PRPF3 (ENSFCAG00000013940) #8	RPRD2 (ENSFCAG00000030083) #9	MCL1 (ENSFCAG00000030278) #14	TARS2 (ENSFCAG00000001702) #10	ECM1 (ENSFCAG00000027224) #11	ADAMTSL4 (ENSFCAG00000000754) #13	ENSA (ENSFCAG00000024290) #15	GOLPH3L (ENSFCAG00000035181) #16	HORMAD1 (ENSFCAG00000025264) #17	CTSS (ENSFCAG00000003642) #18	CTSK (ENSFCAG00000003643) #19	ARNT (ENSFCAG00000003644) #20	ENSFCAG00000035512	SETDB1 (ENSFCAG00000009655) #22	CERS2 (ENSFCAG00000009657) #23	ANXA9 (ENSFCAG00000009658) #24	ENSFCAG00000052357	MINDY1 (ENSFCAG00000009660) #25	PRUNE1 (ENSFCAG00000044569) #26	BNIPL (ENSFCAG00000032352) #27	C1orf56 (ENSFCAG00000041587) #29	CDC42SE1 (ENSFCAG00000052064) #30	MLLT11 (ENSFCAG00000027874) #32	GABPB2 (ENSFCAG00000033249) #33	SEMA6C (ENSFCAG00000005557) #34	TNFAIP8L2 (ENSFCAG00000005558) #35	LYSMD1 (ENSFCAG00000036601) #36	SCNM1 (ENSFCAG00000005560) #37	TMOD4 (ENSFCAG00000005561)
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Chiroptera	ANCESTRAL SPECIES	20	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Microchiroptera	ANCESTRAL SPECIES	21	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Microbat	MODERN SPECIES	1088	APH1A (ENSMLUG00000013692)	C1orf54 (ENSMLUG00000013704)	CIART (ENSMLUG00000013709)	MRPS21 (ENSMLUG00000025875) #7	RPRD2 (ENSMLUG00000013112) #9	TARS2 (ENSMLUG00000013123) #10	ECM1 (ENSMLUG00000013133) #11	ADAMTSL4 (ENSMLUG00000003472) #13	ENSMLUG00000029657	ENSA (ENSMLUG00000027950) #15	GOLPH3L (ENSMLUG00000003484) #16	HORMAD1 (ENSMLUG00000003485) #17	CTSS (ENSMLUG00000003491) #18	CTSK (ENSMLUG00000003495) #19	ARNT (ENSMLUG00000003502) #20	SETDB1 (ENSMLUG00000010486) #22	CERS2 (ENSMLUG00000010519) #23	ANXA9 (ENSMLUG00000010544) #24	ENSMLUG00000010567 #25	PRUNE1 (ENSMLUG00000010581) #26	BNIPL (ENSMLUG00000010588) #27	C1orf56 (ENSMLUG00000023169) #29	MLLT11 (ENSMLUG00000027273) #32	GABPB2 (ENSMLUG00000002973) #33	SEMA6C (ENSMLUG00000002978) #34	ENSMLUG00000015143 #35	LYSMD1 (ENSMLUG00000023399) #36	SCNM1 (ENSMLUG00000015145) #37	TMOD4 (ENSMLUG00000015148)	VPS72 (ENSMLUG00000015162)	PIP5K1A (ENSMLUG00000015171)
Greater horseshoe bat	MODERN SPECIES	14	PRPF3 (ENSRFEG00010020436) #8	RPRD2 (ENSRFEG00010020482) #9	TARS2 (ENSRFEG00010020572) #10	ECM1 (ENSRFEG00010020676) #11	ADAMTSL4 (ENSRFEG00010020724) #13	MCL1 (ENSRFEG00010020768) #14	ENSA (ENSRFEG00010020814) #15	ENSRFEG00010020865	GOLPH3L (ENSRFEG00010020873) #16	HORMAD1 (ENSRFEG00010020903) #17	CTSS (ENSRFEG00010021017) #18	CTSK (ENSRFEG00010021054) #19	ENSRFEG00010021080	ARNT (ENSRFEG00010021097) #20	CTXND2 (ENSRFEG00010021199) #21	SETDB1 (ENSRFEG00010021209) #22	CERS2 (ENSRFEG00010021239) #23	ANXA9 (ENSRFEG00010021262) #24	MINDY1 (ENSRFEG00010021279) #25	PRUNE1 (ENSRFEG00010021296) #26	BNIPL (ENSRFEG00010021309) #27	C1orf56 (ENSRFEG00010021323) #29	ENSRFEG00010021328 #30	MLLT11 (ENSRFEG00010021338) #32	GABPB2 (ENSRFEG00010021352) #33	SEMA6C (ENSRFEG00010021390) #34	TNFAIP8L2 (ENSRFEG00010021420) #35	LYSMD1 (ENSRFEG00010021428) #36	SCNM1 (ENSRFEG00010021441) #37	TMOD4 (ENSRFEG00010021448)	VPS72 (ENSRFEG00010021466)
Megabat	MODERN SPECIES	1048						TARS2 (ENSPVAG00000004340) #10	ECM1 (ENSPVAG00000004342) #11	ADAMTSL4 (ENSPVAG00000004344) #13	MCL1 (ENSPVAG00000004347) #14	ENSA (ENSPVAG00000004348) #15	GOLPH3L (ENSPVAG00000004349) #16	HORMAD1 (ENSPVAG00000004350) #17	CTSS (ENSPVAG00000004352) #18	CTSK (ENSPVAG00000004353) #19	ARNT (ENSPVAG00000004354) #20	SETDB1 (ENSPVAG00000004355) #22
Equus	ANCESTRAL SPECIES	3	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000164740 #21	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00860000134665	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734
Donkey	MODERN SPECIES	17	CIART (ENSEASG00005001554)	MRPS21 (ENSEASG00005001557) #7	PRPF3 (ENSEASG00005001566) #8	RPRD2 (ENSEASG00005001574) #9	TARS2 (ENSEASG00005001587) #10	ECM1 (ENSEASG00005001606) #11	ADAMTSL4 (ENSEASG00005001774) #13	MCL1 (ENSEASG00005002018) #14	ENSA (ENSEASG00005025935) #15	GOLPH3L (ENSEASG00005034481) #16	HORMAD1 (ENSEASG00005002037) #17	CTSS (ENSEASG00005002042) #18	CTSK (ENSEASG00005002046) #19	ARNT (ENSEASG00005002052) #20	CTXND2 (ENSEASG00005023903) #21	SETDB1 (ENSEASG00005002061) #22	CERS2 (ENSEASG00005002064) #23	ANXA9 (ENSEASG00005002066) #24	MINDY1 (ENSEASG00005002074) #25	PRUNE1 (ENSEASG00005002076) #26	BNIPL (ENSEASG00005002080) #27	ENSEASG00005002085 #29	ENSEASG00005027259 #30	ENSEASG00005033916	GABPB2 (ENSEASG00005002094) #33	SEMA6C (ENSEASG00005002102) #34	TNFAIP8L2 (ENSEASG00005034798) #35	LYSMD1 (ENSEASG00005034347) #36	TMOD4 (ENSEASG00005002119)	ENSEASG00005002113 #37	ENSEASG00005002121
Horse	MODERN SPECIES	26	APH1A (ENSECAG00000012998)	CA14 (ENSECAG00000002916)	CIART (ENSECAG00000010349)	PRPF3 (ENSECAG00000019840) #8	RPRD2 (ENSECAG00000018617) #9	TARS2 (ENSECAG00000014276) #10	ECM1 (ENSECAG00000008545) #11	ADAMTSL4 (ENSECAG00000019154) #13	MCL1 (ENSECAG00000018823) #14	ENSA (ENSECAG00000017165) #15	GOLPH3L (ENSECAG00000016587) #16	HORMAD1 (ENSECAG00000011731) #17	CTSS (ENSECAG00000022438) #18	CTSK (ENSECAG00000019087) #19	ARNT (ENSECAG00000009602) #20	SETDB1 (ENSECAG00000023954) #22	CERS2 (ENSECAG00000018141) #23	MINDY1 (ENSECAG00000009096) #25	ANXA9 (ENSECAG00000014801) #24	PRUNE1 (ENSECAG00000000743) #26	C5H1orf56 (ENSECAG00000022044) #29	CDC42SE1 (ENSECAG00000052501) #30	MLLT11 (ENSECAG00000021503) #32	GABPB2 (ENSECAG00000014497) #33	SEMA6C (ENSECAG00000000588) #34	TNFAIP8L2 (ENSECAG00000007696) #35	TMOD4 (ENSECAG00000019026)	SCNM1 (ENSECAG00000023965) #37	VPS72 (ENSECAG00000017754)	PIP5K1A (ENSECAG00000008201)	ENSECAG00000048200
Eulipotyphla	ANCESTRAL SPECIES	127																ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30
Common shrew	MODERN SPECIES	3046																ENSSARG00000002693 #22	CERS2 (ENSSARG00000002775) #23	ENSSARG00000002798 #27	C1orf56 (ENSSARG00000002823) #29	CDC42SE1 (ENSSARG00000002846) #30
Hedgehog	MODERN SPECIES	4020																SETDB1 (ENSEEUG00000015825) #22	CERS2 (ENSEEUG00000015863) #23
Atlantogenata	ANCESTRAL SPECIES	66	ENSGT00390000003103	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Afrotheria	ANCESTRAL SPECIES	76	ENSGT00390000003103	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Afrotheria_a	ANCESTRAL SPECIES	75	ENSGT00390000003103	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Elephant	MODERN SPECIES	26	C1orf54 (ENSLAFG00000022852)	CIART (ENSLAFG00000002729)	MRPS21 (ENSLAFG00000030348) #7	PRPF3 (ENSLAFG00000004713) #8	RPRD2 (ENSLAFG00000004975) #9	TARS2 (ENSLAFG00000004979) #10	ECM1 (ENSLAFG00000028827) #11	ADAMTSL4 (ENSLAFG00000030426) #13	MCL1 (ENSLAFG00000011260) #14	ENSA (ENSLAFG00000011261) #15	GOLPH3L (ENSLAFG00000031294) #16	HORMAD1 (ENSLAFG00000011265) #17	CTSS (ENSLAFG00000011276) #18	CTSK (ENSLAFG00000011279) #19	ARNT (ENSLAFG00000011282) #20	SETDB1 (ENSLAFG00000004006) #22	CERS2 (ENSLAFG00000028936) #23	ANXA9 (ENSLAFG00000004011) #24	MINDY1 (ENSLAFG00000004012) #25	PRUNE1 (ENSLAFG00000004016) #26	BNIPL (ENSLAFG00000029342) #27	C1orf56 (ENSLAFG00000004017) #29	CDC42SE1 (ENSLAFG00000004019) #30	MLLT11 (ENSLAFG00000020588) #32	GABPB2 (ENSLAFG00000004020) #33	SEMA6C (ENSLAFG00000010983) #34	LYSMD1 (ENSLAFG00000013404) #36	SCNM1 (ENSLAFG00000013409) #37	TMOD4 (ENSLAFG00000013414)	VPS72 (ENSLAFG00000013421)	PIP5K1A (ENSLAFG00000013425)
Hyrax	MODERN SPECIES	3217																SETDB1 (ENSPCAG00000002527) #22	CERS2 (ENSPCAG00000002617) #23	ANXA9 (ENSPCAG00000002679) #24	MINDY1 (ENSPCAG00000002750) #25	PRUNE1 (ENSPCAG00000002774) #26	BNIPL (ENSPCAG00000002807) #27	CDC42SE1 (ENSPCAG00000002881) #30	MLLT11 (ENSPCAG00000002899) #32	GABPB2 (ENSPCAG00000002909) #33	SEMA6C (ENSPCAG00000002952) #34	TNFAIP8L2 (ENSPCAG00000003022) #35	LYSMD1 (ENSPCAG00000003030) #36	SCNM1 (ENSPCAG00000003064) #37	TMOD4 (ENSPCAG00000003101)	VPS72 (ENSPCAG00000003194)	PIP5K1A (ENSPCAG00000003223)
Tenrec	MODERN SPECIES	8596																ENSETEG00000013351 #22
Xenarthra	ANCESTRAL SPECIES	253																ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Armadillo	MODERN SPECIES	1323																SETDB1 (ENSDNOG00000007754) #22	CERS2 (ENSDNOG00000007761) #23	ANXA9 (ENSDNOG00000006510) #24	MINDY1 (ENSDNOG00000001917) #25	PRUNE1 (ENSDNOG00000016363) #26	BNIPL (ENSDNOG00000016365) #27	CDC42SE1 (ENSDNOG00000043995) #30	ENSDNOG00000049501 #32	ENSDNOG00000004312 #33	SEMA6C (ENSDNOG00000043434) #34	TNFAIP8L2 (ENSDNOG00000004318) #35	LYSMD1 (ENSDNOG00000037068) #36	SCNM1 (ENSDNOG00000004323) #37	TMOD4 (ENSDNOG00000004327)	VPS72 (ENSDNOG00000004332)
Sloth	MODERN SPECIES	3549																SETDB1 (ENSCHOG00000004013) #22	ENSCHOG00000004042 #23
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00390000002049.c.a	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00390000002049.c.a	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Diprotodontia	ANCESTRAL SPECIES	5	ENSGT00390000002049.c.a	ENSGT00390000018360	ENSGT00500000045038 #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Wallaby	DUPLICATION
Wallaby	MODERN SPECIES	5065																ENSMEUG00000006544 #22	CERS2 (ENSMEUG00000006577) #23	ANXA9 (ENSMEUG00000006597) #24	MINDY1 (ENSMEUG00000006614) #25
Wallaby	MODERN SPECIES	6443																ENSMEUG00000000555 #22	ENSMEUG00000000549
Diprotodontia_a	ANCESTRAL SPECIES	6	ENSGT00390000002049.c.a	ENSGT00390000018360	ENSGT00500000045038.gb #7	ENSGT00390000011497 #8	ENSGT00950000183094.a #9	ENSGT00940000161600 #10	ENSGT00390000006215 #11	ENSGT00940000161136 #13	ENSGT01090000260003.a.b.b.a.a.a.b.b #14	ENSGT00940000155413 #15	ENSGT00390000007153.a.b #16	ENSGT00390000018130.a.a.a #17	ENSGT00940000155176 #18	ENSGT00940000157759 #19	ENSGT00940000157585 #20	ENSGT00940000157471 #22	ENSGT01030000234515.a.b.a.a #23	ENSGT00940000161835 #24	ENSGT00390000016607.b #25	ENSGT00450000040262 #26	ENSGT00940000161723 #27	ENSGT00390000014288 #29	ENSGT00940000160112 #30	ENSGT00390000009895 #32	ENSGT00940000156794 #33	ENSGT00940000158641 #34	ENSGT00390000003488.b #35	ENSGT00940000160002 #36	ENSGT00390000010811 #37	ENSGT00940000158734	ENSGT00390000017503
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1007	ENSVURG00010000715	ENSVURG00010000676	ENSVURG00010000650 #7	ENSVURG00010000618 #8	ENSVURG00010000591 #9	ENSVURG00010000553 #10	ENSVURG00010000529 #11	ENSVURG00010000490 #13	ENSVURG00010000461 #14	ENSVURG00010000444 #15	ENSVURG00010000422 #16	ENSVURG00010000357 #17	ENSVURG00010000321 #18	ENSVURG00010000306 #19	ENSVURG00010000270 #20	ENSVURG00010000234 #22	ENSVURG00010000206 #23	ENSVURG00010000188 #24	ENSVURG00010000167 #25	ENSVURG00010000146 #26	ENSVURG00010000128 #27	ENSVURG00010000117 #29	ENSVURG00010000108 #30	ENSVURG00010018897 #33	ENSVURG00010018895 #35	ENSVURG00010018879 #34	ENSVURG00010018892 #36	ENSVURG00010018868 #37	ENSVURG00010018858	ENSVURG00010018853	ENSVURG00010018840
Common wonbat	MODERN SPECIES	1007	ENSVURG00010015618	ENSVURG00010015603	ENSVURG00010015584 #7	ENSVURG00010015568 #8	ENSVURG00010015284 #9	ENSVURG00010015119 #10	ENSVURG00010015082 #11	ENSVURG00010015042 #13	ENSVURG00010015036 #14	ENSVURG00010015024 #15	ENSVURG00010015007 #16	ENSVURG00010014924 #17	ENSVURG00010014896 #18	ENSVURG00010014884 #19	ENSVURG00010014843 #20	ENSVURG00010014816 #22	ENSVURG00010014801 #23	ENSVURG00010014785 #24	ENSVURG00010014761 #25	ENSVURG00010014734 #26	ENSVURG00010014689 #27	ENSVURG00010014712 #29	ENSVURG00010014667 #30	MLLT11 (ENSVURG00010014655) #32	ENSVURG00010014626 #33	ENSVURG00010014579 #34	ENSVURG00010014564 #35	ENSVURG00010014557 #36	ENSVURG00010014549 #37	ENSVURG00010014536	ENSVURG00010014525
Tasmanian devil	MODERN SPECIES	3	ANP32E (ENSSHAG00000021363)	CA14 (ENSSHAG00000009010)	APH1A (ENSSHAG00000022849)	CIART (ENSSHAG00000021296)	MRPS21 (ENSSHAG00000029824) #7	RPRD2 (ENSSHAG00000009969) #9	TARS2 (ENSSHAG00000010286) #10	ENSSHAG00000009548 #8	ECM1 (ENSSHAG00000010367) #11	ADAMTSL4 (ENSSHAG00000010707) #13	MCL1 (ENSSHAG00000021636) #14	ENSA (ENSSHAG00000029217) #15	HORMAD1 (ENSSHAG00000011613) #17	CTSS (ENSSHAG00000011950) #18	ARNT (ENSSHAG00000025438) #20	SETDB1 (ENSSHAG00000012701) #22	CERS2 (ENSSHAG00000012811) #23	MINDY1 (ENSSHAG00000013033) #25	ANXA9 (ENSSHAG00000012884) #24	ENSSHAG00000028099 #29	ENSSHAG00000029597 #26	ENSSHAG00000026643 #27	GABPB2 (ENSSHAG00000030596) #33	MLLT11 (ENSSHAG00000025455) #32	ENSSHAG00000025507 #36	SEMA6C (ENSSHAG00000013618) #34	ENSSHAG00000022218 #35	SCNM1 (ENSSHAG00000013796) #37	TMOD4 (ENSSHAG00000013797)	VPS72 (ENSSHAG00000013847)	PIP5K1A (ENSSHAG00000013894)
Opossum	MODERN SPECIES	1	APH1A (ENSMODG00000018778)	ENSMODG00000018781	MRPS21 (ENSMODG00000018783) #7	PRPF3 (ENSMODG00000018774) #8	RPRD2 (ENSMODG00000018786) #9	TARS2 (ENSMODG00000018792) #10	ENSMODG00000018796 #11	MCL1 (ENSMODG00000018801) #14	ADAMTSL4 (ENSMODG00000018799) #13	ENSA (ENSMODG00000018804) #15	GOLPH3L (ENSMODG00000051501) #16	HORMAD1 (ENSMODG00000018807) #17	CTSS (ENSMODG00000018809) #18	CTSK (ENSMODG00000018811) #19	ARNT (ENSMODG00000018814) #20	SETDB1 (ENSMODG00000018821) #22	CERS2 (ENSMODG00000018825) #23	ANXA9 (ENSMODG00000018826) #24	MINDY1 (ENSMODG00000018827) #25	PRUNE1 (ENSMODG00000045279) #26	BNIPL (ENSMODG00000046354) #27	ENSMODG00000018832 #29	CDC42SE1 (ENSMODG00000018833) #30	MLLT11 (ENSMODG00000023207) #32	GABPB2 (ENSMODG00000018836) #33	SEMA6C (ENSMODG00000018839) #34	ENSMODG00000048842	TNFAIP8L2 (ENSMODG00000023206) #35	LYSMD1 (ENSMODG00000018841) #36	SCNM1 (ENSMODG00000042115) #37	TMOD4 (ENSMODG00000018845)