Vertebrata ANCESTRAL SPECIES 24 ENSGT01030000234550.a.a.d.a.b ENSGT00530000063981 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 Gnathostomata ANCESTRAL SPECIES 561 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 Euteleostomi ANCESTRAL SPECIES 570 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 Sarcopterygii ANCESTRAL SPECIES 148 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00960000189759 ENSGT00970000198416 ENSGT00530000063981.a ENSGT00940000160758 ENSGT00990000206310 ENSGT00940000161105 ENSGT00440000035348 ENSGT00390000004190 ENSGT00940000153392.b.a ENSGT00390000013715 Tetrapoda ANCESTRAL SPECIES 87 ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00940000177916 ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00940000160916 ENSGT00940000161702 Amniota ANCESTRAL SPECIES 58 ENSGT00940000163296 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00940000177916 ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00390000004003 ENSGT00390000000068 ENSGT00940000166253 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Mammalia ANCESTRAL SPECIES 36 ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00390000004003 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00390000013192 ENSGT00390000014089 Theria ANCESTRAL SPECIES ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00910000144330 ENSGT00940000161540 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b ENSGT01050000244883.A.a.a.b.x ENSGT00940000162509 ENSGT00940000154270 ENSGT00940000162480 ENSGT01050000244883.A.a.a.a.a ENSGT00530000064313 ENSGT00940000155819 ENSGT00940000163545 ENSGT00940000164297 ENSGT00940000163595 Eutheria ANCESTRAL SPECIES 1 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT00940000161540 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b ENSGT00940000162509 ENSGT00940000154460.a ENSGT00940000164102 ENSGT00940000155819.d ENSGT00940000163545.a Boreoeutheria ANCESTRAL SPECIES 13 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a Euarchontoglires ANCESTRAL SPECIES 13 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a Euarchontoglires_A ANCESTRAL SPECIES 17 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a Glires ANCESTRAL SPECIES 18 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a ENSGT00940000162509.l Lagomorpha ANCESTRAL SPECIES 107 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.b.x ENSGT00940000154460.a ENSGT00940000164097 Pika MODERN SPECIES 1889 AGK (ENSOPRG00000012230) #19 DENND11 (ENSOPRG00000012249) #20 WEE2 (ENSOPRG00000009103) #21 SSBP1 (ENSOPRG00000003195) #22 TAS2R4 (ENSOPRG00000009115) #23 PRSS37 (ENSOPRG00000009119) #24 Rabbit DUPLICATION Rabbit DUPLICATION Rabbit MODERN SPECIES 1401 APLN (ENSOCUG00000022649) OCRL (ENSOCUG00000016167) SMARCA1 (ENSOCUG00000001047) ENSOCUG00000025977 ENSOCUG00000030104 ENSOCUG00000034526 ENSOCUG00000002602 ENSOCUG00000029410 PRR32 (ENSOCUG00000015056) ENSOCUG00000000908 ENSOCUG00000010499 ENSOCUG00000006392 ENSOCUG00000023025 TENM1 (ENSOCUG00000005013) SH2D1A (ENSOCUG00000005012) ENSOCUG00000022591 #22 STAG2 (ENSOCUG00000009879) ENSOCUG00000009878 THOC2 (ENSOCUG00000005996) GRIA3 (ENSOCUG00000000315) ENSOCUG00000021549 ENSOCUG00000027726 C1GALT1C1 (ENSOCUG00000004781) ENSOCUG00000014315 CUL4B (ENSOCUG00000015633) ENSOCUG00000027764 LAMP2 (ENSOCUG00000024954) ATP1B4 (ENSOCUG00000003951) TMEM255A (ENSOCUG00000004334) ZBTB33 (ENSOCUG00000004331) ENSOCUG00000029262 Rabbit MODERN SPECIES 18 MDFIC (ENSOCUG00000012455) TFEC (ENSOCUG00000006292) TES (ENSOCUG00000008491) CAV2 (ENSOCUG00000014515) CAV1 (ENSOCUG00000014520) MET (ENSOCUG00000013060) ST7 (ENSOCUG00000016156) WNT2 (ENSOCUG00000016173) ASZ1 (ENSOCUG00000015962) CFTR (ENSOCUG00000010733) ENSOCUG00000038182 CTTNBP2 (ENSOCUG00000001386) LSM8 (ENSOCUG00000017359) ENSOCUG00000021922 ENSOCUG00000032257 ENSOCUG00000023965 #22 ENSOCUG00000037642 KCND2 (ENSOCUG00000004149) TSPAN12 (ENSOCUG00000001875) ENSOCUG00000034467 ING3 (ENSOCUG00000001881) CPED1 (ENSOCUG00000005778) WNT16 (ENSOCUG00000014744) FAM3C (ENSOCUG00000003351) PTPRZ1 (ENSOCUG00000013209) AASS (ENSOCUG00000013237) FEZF1 (ENSOCUG00000021285) ENSOCUG00000039223 ENSOCUG00000033009 CADPS2 (ENSOCUG00000007425) TAS2R16 (ENSOCUG00000017889) ##23 Rabbit MODERN SPECIES 491 ENSOCUG00000022873 DENND11 (ENSOCUG00000017559) #20 WEE2 (ENSOCUG00000026396) #21 ENSOCUG00000003799 #22 TAS2R3 (ENSOCUG00000003800) ##23 TAS2R4 (ENSOCUG00000003805) #23 PRSS37 (ENSOCUG00000006129) #24 ENSOCUG00000022171 ENSOCUG00000037719 CLEC5A (ENSOCUG00000009582) ENSOCUG00000031008 ##23 MGAM (ENSOCUG00000008177) ENSOCUG00000000872 ENSOCUG00000000387 ENSOCUG00000025914 PRSS58 (ENSOCUG00000000389) ENSOCUG00000000393 ENSOCUG00000025211 ENSOCUG00000026000 Rodentia ANCESTRAL SPECIES 12 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163043 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b Rodentia_A ANCESTRAL SPECIES 12 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163043 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l Sciuridae ANCESTRAL SPECIES 7 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.b.b ENSGT00940000162480.a Marmotini ANCESTRAL SPECIES 32 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401.y.a ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.b.b ENSGT01050000244883.A.a.a.a.b.k.a.b.b.a.a.c.b ENSGT01050000244883.A.a.a.a.b.k.a.b.b.a.a.c.a Alpin marmot MODERN SPECIES 35 PARP12 (ENSMMMG00000011607) KDM7A (ENSMMMG00000011574) ENSMMMG00000011544 MKRN1 (ENSMMMG00000011534) DENND2A (ENSMMMG00000011518) ADCK2 (ENSMMMG00000011466) NDUFB2 (ENSMMMG00000011455) BRAF (ENSMMMG00000011443) ENSMMMG00000011427 ENSMMMG00000011416 ENSMMMG00000011406 TMEM178B (ENSMMMG00000011372) AGK (ENSMMMG00000011318) #19 DENND11 (ENSMMMG00000011283) #20 WEE2 (ENSMMMG00000011258) #21 SSBP1 (ENSMMMG00000011224) #22 ENSMMMG00000011214 ##23 TAS2R4 (ENSMMMG00000011210) #23 ENSMMMG00000011201 ##23 PRSS37 (ENSMMMG00000011182) #24 OR9A1P (ENSMMMG00000011173) OR9A4 (ENSMMMG00000011167) CLEC5A (ENSMMMG00000011125) MGAM (ENSMMMG00000010862) MGAM2 (ENSMMMG00000009935) ENSMMMG00000009899 PRSS58 (ENSMMMG00000009890) ENSMMMG00000009883 ENSMMMG00000009748 ENSMMMG00000008868 ENSMMMG00000008499 Marmotini_b ANCESTRAL SPECIES 117 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139.i ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401.y.a ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT00940000161540 Squirrel MODERN SPECIES 192 CLEC2L (ENSSTOG00000021797) HIPK2 (ENSSTOG00000005957) TBXAS1 (ENSSTOG00000004552) PARP12 (ENSSTOG00000004578) KDM7A (ENSSTOG00000012789) ENSSTOG00000010929 ENSSTOG00000031161 DENND2A (ENSSTOG00000002912) ADCK2 (ENSSTOG00000002559) NDUFB2 (ENSSTOG00000002566) BRAF (ENSSTOG00000002569) ENSSTOG00000001019 TMEM178B (ENSSTOG00000023428) AGK (ENSSTOG00000020008) #19 DENND11 (ENSSTOG00000006980) #20 SSBP1 (ENSSTOG00000007007) #22 PRSS37 (ENSSTOG00000014505) #24 OR9A4 (ENSSTOG00000028119) CLEC5A (ENSSTOG00000015960) ENSSTOG00000003319 Arctic ground squirrel MODERN SPECIES 318 PARP12 (ENSUPAG00010015611) KDM7A (ENSUPAG00010015626) ENSUPAG00010015737 RAB19 (ENSUPAG00010015754) MKRN1 (ENSUPAG00010015763) DENND2A (ENSUPAG00010015818) ADCK2 (ENSUPAG00010015851) NDUFB2 (ENSUPAG00010015866) BRAF (ENSUPAG00010015886) ENSUPAG00010015929 MRPS33 (ENSUPAG00010015943) TMEM178B (ENSUPAG00010015946) AGK (ENSUPAG00010015967) #19 DENND11 (ENSUPAG00010015983) #20 WEE2 (ENSUPAG00010015989) #21 SSBP1 (ENSUPAG00010016004) #22 ENSUPAG00010016035 ##23 TAS2R4 (ENSUPAG00010016043) #23 ENSUPAG00010016047 ##23 PRSS37 (ENSUPAG00010016052) #24 OR9A1P (ENSUPAG00010016064) OR9A4 (ENSUPAG00010016069) CLEC5A (ENSUPAG00010016074) MGAM (ENSUPAG00010016104) Eurasian red squirrel MODERN SPECIES 17 KDM7A (ENSSVLG00005012470) ENSSVLG00005012379 RAB19 (ENSSVLG00005012313) ENSSVLG00005012241 ENSSVLG00005012011 DENND2A (ENSSVLG00005011668) ADCK2 (ENSSVLG00005011400) NDUFB2 (ENSSVLG00005011276) BRAF (ENSSVLG00005011137) ENSSVLG00005011057 MRPS33 (ENSSVLG00005011000) TMEM178B (ENSSVLG00005010943) AGK (ENSSVLG00005010726) #19 DENND11 (ENSSVLG00005010569) #20 ENSSVLG00005010476 #21 SSBP1 (ENSSVLG00005010423) #22 ENSSVLG00005010410 ##23 ENSSVLG00005010344 ##23 PRSS37 (ENSSVLG00005010291) #24 OR9A1P (ENSSVLG00005010283) OR9A4 (ENSSVLG00005010273) CLEC5A (ENSSVLG00005010134) TAS2R38 (ENSSVLG00005010093) ##23 MGAM (ENSSVLG00005009048) ENSSVLG00005008783 ENSSVLG00005008706 PRSS58 (ENSSVLG00005017027) ENSSVLG00005016942 ENSSVLG00005016228 ENSSVLG00005016073 ENSSVLG00005015340 Hystricomorpha ANCESTRAL SPECIES 35 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163043 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000154460.a ENSGT00940000163545.a Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 6 ENSHGLG00000005137 PLCB1 (ENSHGLG00000017610) ENSHGLG00000044330 PLCB4 (ENSHGLG00000018217) LAMP5 (ENSHGLG00000036148) ENSHGLG00000032981 PAK5 (ENSHGLG00000016050) ENSHGLG00000046856 ANKEF1 (ENSHGLG00000017245) ENSHGLG00000016926 ENSHGLG00000033517 ISM1 (ENSHGLG00000043849) TASP1 (ENSHGLG00000016276) ESF1 (ENSHGLG00000011505) NDUFAF5 (ENSHGLG00000012482) ENSHGLG00000021400 #22 ENSHGLG00000017747 ENSHGLG00000037190 FLRT3 (ENSHGLG00000016173) ENSHGLG00000032467 ENSHGLG00000017926 ENSHGLG00000016849 SNRPB2 (ENSHGLG00000006969) OTOR (ENSHGLG00000008576) ENSHGLG00000005046 ENSHGLG00000020281 ENSHGLG00000018289 BANF2 (ENSHGLG00000015254) SNX5 (ENSHGLG00000017606) OVOL2 (ENSHGLG00000045118) PET117 (ENSHGLG00000016254) Naked mole-rat female MODERN SPECIES 17 ENSHGLG00000009494 RAB19 (ENSHGLG00000010948) ENSHGLG00000044578 ENSHGLG00000040747 ENSHGLG00000043500 DENND2A (ENSHGLG00000014310) ADCK2 (ENSHGLG00000037504) ENSHGLG00000017933 BRAF (ENSHGLG00000014168) ENSHGLG00000049810 ENSHGLG00000040990 TMEM178B (ENSHGLG00000043245) AGK (ENSHGLG00000046237) #19 DENND11 (ENSHGLG00000010322) #20 ENSHGLG00000011701 #21 ENSHGLG00000009362 #22 TAS2R4 (ENSHGLG00000039087) #23 PRSS37 (ENSHGLG00000006169) #24 CLEC5A (ENSHGLG00000041574) TAS2R38 (ENSHGLG00000008887) ##23 MGAM (ENSHGLG00000009763) ENSHGLG00000036048 ENSHGLG00000012020 ENSHGLG00000004421 ENSHGLG00000006188 SEMA4D (ENSHGLG00000007257) ENSHGLG00000008542 ENSHGLG00000014380 CKS2 (ENSHGLG00000008721) SHC3 (ENSHGLG00000009124) ENSHGLG00000032550 Hystricomorpha_a ANCESTRAL SPECIES 40 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT00940000163545.a ENSGT00940000162480.b Guinea pig MODERN SPECIES 10 TBXAS1 (ENSCPOG00000000064) PARP12 (ENSCPOG00000011210) KDM7A (ENSCPOG00000011219) ENSCPOG00000003740 RAB19 (ENSCPOG00000031937) MKRN1 (ENSCPOG00000000948) DENND2A (ENSCPOG00000030550) ADCK2 (ENSCPOG00000031703) NDUFB2 (ENSCPOG00000025368) BRAF (ENSCPOG00000021487) MRPS33 (ENSCPOG00000038792) ENSCPOG00000020150 AGK (ENSCPOG00000015447) #19 DENND11 (ENSCPOG00000015452) #20 ENSCPOG00000025291 #21 SSBP1 (ENSCPOG00000040289) #22 TAS2R3 (ENSCPOG00000007635) ##23 TAS2R4 (ENSCPOG00000026813) #23 PRSS37 (ENSCPOG00000004461) #24 CLEC5A (ENSCPOG00000039585) MGAM (ENSCPOG00000011280) ENSCPOG00000039963 MGAM2 (ENSCPOG00000009935) PRSS58 (ENSCPOG00000006756) ENSCPOG00000021713 ENSCPOG00000026673 ENSCPOG00000010598 ENSCPOG00000025586 ENSCPOG00000032580 ENSCPOG00000038762 ENSCPOG00000038847 Hystricomorpha_b ANCESTRAL SPECIES 40 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000161483 #24 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.b.x.m ENSGT00940000156687.g ENSGT00940000160399.d ENSGT00940000161809 Degu DUPLICATION Degu MODERN SPECIES 84 FAM107A (ENSODEG00000009417) ACOX2 (ENSODEG00000009665) KCTD6 (ENSODEG00000009456) PDHB (ENSODEG00000011071) PXK (ENSODEG00000009061) ENSODEG00000010715 ABHD6 (ENSODEG00000008297) ENSODEG00000010685 METTL6 (ENSODEG00000008650) EAF1 (ENSODEG00000008752) COLQ (ENSODEG00000009333) HACL1 (ENSODEG00000007866) ENSODEG00000019451 SH3BP5 (ENSODEG00000013984) CAPN7 (ENSODEG00000009154) ENSODEG00000008798 #22 DNAH1 (ENSODEG00000008443) BAP1 (ENSODEG00000008927) PHF7 (ENSODEG00000008416) SEMA3G (ENSODEG00000010653) ENSODEG00000010480 NISCH (ENSODEG00000007768) ENSODEG00000007867 ENSODEG00000008276 NT5DC2 (ENSODEG00000008156) UQCC5 (ENSODEG00000007436) ENSODEG00000019639 ENSODEG00000009139 PBRM1 (ENSODEG00000008265) GNL3 (ENSODEG00000009492) ENSODEG00000007760 Degu MODERN SPECIES 68 ENSODEG00000014445 ENSODEG00000014675 RAB19 (ENSODEG00000013764) ENSODEG00000013658 ENSODEG00000013390 ENSODEG00000014071 NDUFB2 (ENSODEG00000013607) BRAF (ENSODEG00000013401) ENSODEG00000012846 ENSODEG00000014878 ENSODEG00000013320 ENSODEG00000013547 AGK (ENSODEG00000015489) #19 DENND11 (ENSODEG00000013048) #20 ENSODEG00000013142 #21 ENSODEG00000013367 #22 PRSS37 (ENSODEG00000013473) #24 CLEC5A (ENSODEG00000013699) ENSODEG00000014828 ENSODEG00000013408 ENSODEG00000012690 PRSS58 (ENSODEG00000013832) ENSODEG00000013684 ENSODEG00000012923 ENSODEG00000012554 ENSODEG00000013222 ENSODEG00000014167 ENSODEG00000012766 TRPV6 (ENSODEG00000015340) EPHB6 (ENSODEG00000012570) TRPV5 (ENSODEG00000014153) Long-tailed chinchilla MODERN SPECIES 201 SLC37A3 (ENSCLAG00000001923) MKRN1 (ENSCLAG00000001783) ENSCLAG00000001763 DENND2A (ENSCLAG00000001519) ADCK2 (ENSCLAG00000001471) NDUFB2 (ENSCLAG00000001447) ENSCLAG00000001414 ENSCLAG00000001297 ENSCLAG00000001167 MRPS33 (ENSCLAG00000001134) ENSCLAG00000001114 AGK (ENSCLAG00000001071) #19 DENND11 (ENSCLAG00000001043) #20 ENSCLAG00000001751 WEE2 (ENSCLAG00000009356) #21 SSBP1 (ENSCLAG00000009247) #22 PRSS37 (ENSCLAG00000008886) #24 CLEC5A (ENSCLAG00000008820) TAS2R38 (ENSCLAG00000008669) ##23 ENSCLAG00000007384 ENSCLAG00000003350 ENSCLAG00000003095 ENSCLAG00000003077 PRSS58 (ENSCLAG00000002996) ENSCLAG00000001949 ENSCLAG00000001291 ENSCLAG00000001271 ENSCLAG00000001180 ENSCLAG00000001157 ENSCLAG00000001113 TRPV6 (ENSCLAG00000001066) Rodentia_B ANCESTRAL SPECIES 9 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a Myomorpha ANCESTRAL SPECIES 8 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a Muroidea ANCESTRAL SPECIES 8 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b Muroidea_A ANCESTRAL SPECIES 4 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a Murinae ANCESTRAL SPECIES 4 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a Mus ANCESTRAL SPECIES 20 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a Mus_A ANCESTRAL SPECIES 7 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401.s ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a Ryukyu mouse MODERN SPECIES 15 Parp12 (MGP_CAROLIEiJ_G0028242) MGP_CAROLIEiJ_G0028243 MGP_CAROLIEiJ_G0028244 Rab19 (MGP_CAROLIEiJ_G0028245) Mkrn1 (MGP_CAROLIEiJ_G0028246) Dennd2a (MGP_CAROLIEiJ_G0028247) Adck2 (MGP_CAROLIEiJ_G0028248) MGP_CAROLIEiJ_G0028249 Ndufb2 (MGP_CAROLIEiJ_G0028250) Braf (MGP_CAROLIEiJ_G0028251) Mrps33 (MGP_CAROLIEiJ_G0028252) MGP_CAROLIEiJ_G0028253 Agk (MGP_CAROLIEiJ_G0028254) #19 Dennd11 (MGP_CAROLIEiJ_G0028255) #20 Wee2 (MGP_CAROLIEiJ_G0028256) #21 Ssbp1 (MGP_CAROLIEiJ_G0028257) #22 MGP_CAROLIEiJ_G0028258 Tas2r108 (MGP_CAROLIEiJ_G0028259) #23 Prss37 (MGP_CAROLIEiJ_G0028260) #24 Or9a7 (MGP_CAROLIEiJ_G0028261) Or9a4 (MGP_CAROLIEiJ_G0028262) Clec5a (MGP_CAROLIEiJ_G0028263) Tas2r138 (MGP_CAROLIEiJ_G0028264) ##23 MGP_CAROLIEiJ_G0028265 Moxd2 (MGP_CAROLIEiJ_G0028266) Trbv1 (MGP_CAROLIEiJ_G0002243) Prss58 (MGP_CAROLIEiJ_G0028267) Prss59 (MGP_CAROLIEiJ_G0028268) MGP_CAROLIEiJ_G0028269 MGP_CAROLIEiJ_G0028270 MGP_CAROLIEiJ_G0028271 Mus_B ANCESTRAL SPECIES 20 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401.s ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a Mus_C ANCESTRAL SPECIES 19 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401.s ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ENSGT01050000244883.A.a.a.a.b.k.b spretus MODERN SPECIES 15 Parp12 (MGP_SPRETEiJ_G0029241) Kdm7a (MGP_SPRETEiJ_G0029242) Slc37a3 (MGP_SPRETEiJ_G0029243) Rab19 (MGP_SPRETEiJ_G0029244) Mkrn1 (MGP_SPRETEiJ_G0029245) Dennd2a (MGP_SPRETEiJ_G0029246) Adck2 (MGP_SPRETEiJ_G0029247) MGP_SPRETEiJ_G0029248 Ndufb2 (MGP_SPRETEiJ_G0029249) Braf (MGP_SPRETEiJ_G0029250) Mrps33 (MGP_SPRETEiJ_G0029251) MGP_SPRETEiJ_G0029252 Agk (MGP_SPRETEiJ_G0029253) #19 Dennd11 (MGP_SPRETEiJ_G0029254) #20 Wee2 (MGP_SPRETEiJ_G0029255) #21 Ssbp1 (MGP_SPRETEiJ_G0029256) #22 MGP_SPRETEiJ_G0029257 Tas2r108 (MGP_SPRETEiJ_G0029258) #23 Prss37 (MGP_SPRETEiJ_G0029259) #24 MGP_SPRETEiJ_G0029260 Or9a4 (MGP_SPRETEiJ_G0029261) Clec5a (MGP_SPRETEiJ_G0029262) Tas2r138 (MGP_SPRETEiJ_G0029263) ##23 MGP_SPRETEiJ_G0029264 Moxd2 (MGP_SPRETEiJ_G0029265) Trbv1 (MGP_SPRETEiJ_G0002397) Prss58 (MGP_SPRETEiJ_G0029266) Prss59 (MGP_SPRETEiJ_G0029267) MGP_SPRETEiJ_G0029268 MGP_SPRETEiJ_G0029269 MGP_SPRETEiJ_G0029270 Steppe mouse MODERN SPECIES 3159 Parp12 (ENSMSIG00000003821) Kdm7a (ENSMSIG00000003734) Slc37a3 (ENSMSIG00000003657) Rab19 (ENSMSIG00000003633) Mkrn1 (ENSMSIG00000003580) ENSMSIG00000003618 Dennd2a (ENSMSIG00000003496) Adck2 (ENSMSIG00000003366) Ndufb2 (ENSMSIG00000003342) Braf (ENSMSIG00000003138) ENSMSIG00000003115 ENSMSIG00000003101 Agk (ENSMSIG00000003072) #19 Dennd11 (ENSMSIG00000003036) #20 Wee2 (ENSMSIG00000002990) #21 Ssbp1 (ENSMSIG00000002905) #22 Tas2r137 (ENSMSIG00000002897) ##23 Tas2r108 (ENSMSIG00000002885) #23 Prss37 (ENSMSIG00000002853) #24 Or9a7 (ENSMSIG00000002837) Clec5a (ENSMSIG00000002705) Tas2r138 (ENSMSIG00000002690) ##23 ENSMSIG00000002337 ENSMSIG00000001963 Moxd2 (ENSMSIG00000001914) Trbv1 (ENSMSIG00000001891) Prss59 (ENSMSIG00000001848) ENSMSIG00000001830 Mouse MODERN SPECIES 15 Tbxas1 (ENSMUSG00000029925) Parp12 (ENSMUSG00000038507) Kdm7a (ENSMUSG00000042599) Slc37a3 (ENSMUSG00000029924) Rab19 (ENSMUSG00000029923) Mkrn1 (ENSMUSG00000029922) Dennd2a (ENSMUSG00000038456) Adck2 (ENSMUSG00000046947) Ndufb2 (ENSMUSG00000002416) Braf (ENSMUSG00000002413) Mrps33 (ENSMUSG00000029918) Tmem178b (ENSMUSG00000057716) Agk (ENSMUSG00000029916) #19 Dennd11 (ENSMUSG00000037172) #20 Wee2 (ENSMUSG00000037159) #21 Ssbp1 (ENSMUSG00000029911) #22 Tas2r137 (ENSMUSG00000052850) ##23 Tas2r108 (ENSMUSG00000037140) #23 Prss37 (ENSMUSG00000029909) #24 Or9a7 (ENSMUSG00000068259) Or9a4 (ENSMUSG00000045514) Clec5a (ENSMUSG00000029915) Tas2r138 (ENSMUSG00000058250) ##23 Mgam (ENSMUSG00000068587) Mgam2-ps (ENSMUSG00000102802) Moxd2 (ENSMUSG00000029885) Trbv1 (ENSMUSG00000076461) Prss58 (ENSMUSG00000051936) Prss59 (ENSMUSG00000029883) 1810009J06Rik (ENSMUSG00000094808) Gm2663 (ENSMUSG00000096525) Shrew mouse MODERN SPECIES 11 Parp12 (MGP_PahariEiJ_G0022000) Kdm7a (MGP_PahariEiJ_G0022001) MGP_PahariEiJ_G0022002 Rab19 (MGP_PahariEiJ_G0022003) Mkrn1 (MGP_PahariEiJ_G0022004) Dennd2a (MGP_PahariEiJ_G0022005) Adck2 (MGP_PahariEiJ_G0022006) MGP_PahariEiJ_G0022007 Ndufb2 (MGP_PahariEiJ_G0022008) Braf (MGP_PahariEiJ_G0022009) Mrps33 (MGP_PahariEiJ_G0022010) MGP_PahariEiJ_G0022011 Agk (MGP_PahariEiJ_G0022012) #19 Dennd11 (MGP_PahariEiJ_G0022013) #20 Wee2 (MGP_PahariEiJ_G0022014) #21 Ssbp1 (MGP_PahariEiJ_G0022015) #22 MGP_PahariEiJ_G0022016 Tas2r108 (MGP_PahariEiJ_G0022017) #23 Prss37 (MGP_PahariEiJ_G0022018) #24 Or9a4 (MGP_PahariEiJ_G0022019) Clec5a (MGP_PahariEiJ_G0022020) Tas2r138 (MGP_PahariEiJ_G0022021) ##23 MGP_PahariEiJ_G0022022 Moxd2 (MGP_PahariEiJ_G0022023) Trbv1 (MGP_PahariEiJ_G0002045) Prss58 (MGP_PahariEiJ_G0022024) Prss59 (MGP_PahariEiJ_G0022025) MGP_PahariEiJ_G0022026 MGP_PahariEiJ_G0022027 MGP_PahariEiJ_G0022028 Prss3b (MGP_PahariEiJ_G0022029) Rat MODERN SPECIES 14 Tbxas1 (ENSRNOG00000007918) Parp12 (ENSRNOG00000008196) Kdm7a (ENSRNOG00000052445) Chmp4bl1 (ENSRNOG00000034071) Slc37a3 (ENSRNOG00000008725) Rab19 (ENSRNOG00000009030) Mkrn1 (ENSRNOG00000009280) Dennd2a (ENSRNOG00000026748) Ndufb2 (ENSRNOG00000010005) Braf (ENSRNOG00000010957) Mrps33 (ENSRNOG00000026528) Tmem178b (ENSRNOG00000047635) Agk (ENSRNOG00000011509) #19 Dennd11 (ENSRNOG00000011854) #20 Wee2 (ENSRNOG00000026446) #21 Ssbp1 (ENSRNOG00000012100) #22 Tas2r137 (ENSRNOG00000030413) ##23 Tas2r108 (ENSRNOG00000012195) #23 Prss37 (ENSRNOG00000012201) #24 Or9a4 (ENSRNOG00000066955) Clec5a (ENSRNOG00000026306) Tas2r138 (ENSRNOG00000026225) ##23 Mgam (ENSRNOG00000026177) Mgam2 (ENSRNOG00000066165) Moxd2 (ENSRNOG00000012916) Trbv1 (ENSRNOG00000048468) Prss58 (ENSRNOG00000013132) Prss59 (ENSRNOG00000028989) LOC312273 (ENSRNOG00000013203) LOC286960 (ENSRNOG00000013245) Prss3b (ENSRNOG00000013382) Cricetidae ANCESTRAL SPECIES 3 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.w ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ENSGT01050000244883.A.a.a.a.b.k.a.a ENSGT00940000162509.l Cricetinae ANCESTRAL SPECIES 23 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.b ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.w ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.a ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.a ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.b.f Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 160 Fig4 (ENSCGRG00001015893) Gpr6 (ENSCGRG00001015004) Wasf1 (ENSCGRG00001013706) Cdc40 (ENSCGRG00001012490) Mettl24 (ENSCGRG00001012045) Ddo (ENSCGRG00001010313) Slc22a16 (ENSCGRG00001010111) ENSCGRG00001008723 ENSCGRG00001006339 Cdk19 (ENSCGRG00001013081) ENSCGRG00001010501 Gtf3c6 (ENSCGRG00001010188) ENSCGRG00001007331 ENSCGRG00001014458 Slc16a10 (ENSCGRG00001004043) ENSCGRG00001001576 #22 ENSCGRG00001000675 Mfsd4b5 (ENSCGRG00001023659) ENSCGRG00001021041 ENSCGRG00001019786 Mfsd4b4 (ENSCGRG00001018700) Rev3l (ENSCGRG00001006588) Traf3ip2 (ENSCGRG00001022894) Fyn (ENSCGRG00001013292) ENSCGRG00001012299 ENSCGRG00001014335 Ccn6 (ENSCGRG00001011722) Tube1 (ENSCGRG00001012631) Fam229b (ENSCGRG00001012149) Lama4 (ENSCGRG00001023009) Marcks (ENSCGRG00001020371) Chinese hamster chok1gshd MODERN SPECIES 153 Fbn2 (ENSCGRG00001020407) ENSCGRG00001024319 Slc12a2 (ENSCGRG00001019992) Ccdc192 (ENSCGRG00001017920) Ctxn3 (ENSCGRG00001003792) Prrc1 (ENSCGRG00001021725) Megf10 (ENSCGRG00001016594) C330018D20Rik (ENSCGRG00001000564) Marchf3 (ENSCGRG00001018443) Lmnb1 (ENSCGRG00001023736) Tex43 (ENSCGRG00001000467) Phax (ENSCGRG00001022020) ENSCGRG00001012154 ENSCGRG00001011295 Gramd3 (ENSCGRG00001014891) ENSCGRG00001013902 #22 Zfp608 (ENSCGRG00001015219) Csnk1g3 (ENSCGRG00001024465) Cep120 (ENSCGRG00001017499) Prdm6 (ENSCGRG00001016821) Ppic (ENSCGRG00001008818) Snx24 (ENSCGRG00001011694) ENSCGRG00001023240 Sncaip (ENSCGRG00001013058) Gykl1 (ENSCGRG00001001492) 1700034E13Rik (ENSCGRG00001001918) Zfp474 (ENSCGRG00001002746) Lox (ENSCGRG00001014607) Srfbp1 (ENSCGRG00001000718) Ftmt (ENSCGRG00001006087) ENSCGRG00001012009 Chinese hamster chok1gshd MODERN SPECIES 54 Kdm7a (ENSCGRG00001009052) Slc37a3 (ENSCGRG00001009575) Rab19 (ENSCGRG00001003148) ENSCGRG00001013880 Mkrn1 (ENSCGRG00001016621) Dennd2a (ENSCGRG00001013315) Adck2 (ENSCGRG00001016753) Ndufb2 (ENSCGRG00001008411) Braf (ENSCGRG00001021906) ENSCGRG00001023061 Mrps33 (ENSCGRG00001000348) ENSCGRG00001012889 Agk (ENSCGRG00001013723) #19 Dennd11 (ENSCGRG00001015156) #20 Wee2 (ENSCGRG00001006258) #21 ENSCGRG00001015635 #22 Tas2r137 (ENSCGRG00001009992) ##23 Tas2r108 (ENSCGRG00001010522) #23 Prss37 (ENSCGRG00001018297) #24 Crot (ENSCGRG00001023042) Abcb4 (ENSCGRG00001013813) Abcb1b (ENSCGRG00001002555) ABCB1 (ENSCGRG00001014754) Rundc3b (ENSCGRG00001002136) Slc25a40 (ENSCGRG00001000177) Dbf4 (ENSCGRG00001014352) Adam22 (ENSCGRG00001024130) Sri (ENSCGRG00001010200) Steap4 (ENSCGRG00001019212) Zfp804b (ENSCGRG00001000316) Tex47 (ENSCGRG00001007269) Chinese hamster chok1gshd MODERN SPECIES 111 Cnr1 (ENSCGRG00001010105) Spaca1 (ENSCGRG00001016168) Akirin2 (ENSCGRG00001013427) Orc3 (ENSCGRG00001023069) Rars2 (ENSCGRG00001021675) SLC35A1 (ENSCGRG00001019920) Cfap206 (ENSCGRG00001002156) ENSCGRG00001014099 Smim8 (ENSCGRG00001012821) ENSCGRG00001006646 Zfp292 (ENSCGRG00001003267) Cga (ENSCGRG00001000454) ENSCGRG00001024026 ENSCGRG00001023523 Mob3b (ENSCGRG00001022528) ENSCGRG00001021493 #22 ENSCGRG00001006221 C9orf72 (ENSCGRG00001013910) Lingo2 (ENSCGRG00001009497) ENSCGRG00001010834 1700009N14Rik (ENSCGRG00001004727) Aco1 (ENSCGRG00001024337) Rigi (ENSCGRG00001024123) Topors (ENSCGRG00001022117) Ndufb6 (ENSCGRG00001021089) Tmem215 (ENSCGRG00001009559) Aptx (ENSCGRG00001000705) Dnaja1 (ENSCGRG00001009232) Smu1 (ENSCGRG00001023488) B4galt1 (ENSCGRG00001014638) Spink4 (ENSCGRG00001023982) Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 817 ENSMAUG00000003611 Rab19 (ENSMAUG00000001491) ENSMAUG00000001183 Dennd2a (ENSMAUG00000000468) Adck2 (ENSMAUG00000000751) Ndufb2 (ENSMAUG00000000340) Braf (ENSMAUG00000016066) Mrps33 (ENSMAUG00000014314) ENSMAUG00000018327 ENSMAUG00000017929 ENSMAUG00000016360 Agk (ENSMAUG00000015011) #19 Dennd11 (ENSMAUG00000014079) #20 ENSMAUG00000013965 Wee2 (ENSMAUG00000013105) #21 ENSMAUG00000016883 #22 Tas2r108 (ENSMAUG00000015894) #23 Prss37 (ENSMAUG00000014269) #24 Or9a4 (ENSMAUG00000015834) Clec5a (ENSMAUG00000013571) ENSMAUG00000011057 ENSMAUG00000011729 Golden Hamster MODERN SPECIES 617 Rnls (ENSMAUG00000006476) ENSMAUG00000004988 Lipf (ENSMAUG00000006602) Lipk (ENSMAUG00000008826) Lipn (ENSMAUG00000009129) Lipm (ENSMAUG00000006798) Ankrd22 (ENSMAUG00000005961) ENSMAUG00000004326 Acta2 (ENSMAUG00000007124) Fas (ENSMAUG00000008875) Ch25h (ENSMAUG00000001529) Lipa (ENSMAUG00000004120) Ifit2 (ENSMAUG00000004507) ENSMAUG00000004294 ENSMAUG00000004543 ENSMAUG00000006010 #22 Slc16a12 (ENSMAUG00000005932) Pank1 (ENSMAUG00000004211) Kif20b (ENSMAUG00000003707) Htr7 (ENSMAUG00000008537) Rpp30 (ENSMAUG00000008797) Ankrd1 (ENSMAUG00000004256) Pcgf5 (ENSMAUG00000006268) Hectd2 (ENSMAUG00000005723) Ppp1r3c (ENSMAUG00000021890) Tnks2 (ENSMAUG00000002675) Fgfbp3 (ENSMAUG00000003881) Btaf1 (ENSMAUG00000003977) Cpeb3 (ENSMAUG00000002789) ENSMAUG00000001811 ENSMAUG00000004621 Cricetidae_B ANCESTRAL SPECIES 10 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.w ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ENSGT01050000244883.A.a.a.a.b.k.a.a ENSGT00940000162509.l Prairie vole MODERN SPECIES 87 Kdm7a (ENSMOCG00000012739) Slc37a3 (ENSMOCG00000013977) ENSMOCG00000018385 Rab19 (ENSMOCG00000000473) Mkrn1 (ENSMOCG00000006155) Dennd2a (ENSMOCG00000012296) Adck2 (ENSMOCG00000021171) ENSMOCG00000016120 Braf (ENSMOCG00000023027) ENSMOCG00000016152 ENSMOCG00000020593 ENSMOCG00000000534 Agk (ENSMOCG00000003528) #19 Dennd11 (ENSMOCG00000018809) #20 Wee2 (ENSMOCG00000000778) #21 Ssbp1 (ENSMOCG00000015007) #22 Prss37 (ENSMOCG00000000882) #24 Or9a4 (ENSMOCG00000002678) Clec5a (ENSMOCG00000016188) ENSMOCG00000013070 Moxd2 (ENSMOCG00000014636) Prss58 (ENSMOCG00000001185) Prss59 (ENSMOCG00000004650) ENSMOCG00000003387 ENSMOCG00000012091 Northern American deer mouse MODERN SPECIES 16 Tbxas1 (ENSPEMG00000012189) Parp12 (ENSPEMG00000023375) Kdm7a (ENSPEMG00000007158) Slc37a3 (ENSPEMG00000023926) Rab19 (ENSPEMG00000006800) Mkrn1 (ENSPEMG00000023646) Dennd2a (ENSPEMG00000021909) Adck2 (ENSPEMG00000021773) ENSPEMG00000023701 Braf (ENSPEMG00000001337) ENSPEMG00000021616 ENSPEMG00000016644 Agk (ENSPEMG00000018886) #19 Dennd11 (ENSPEMG00000009508) #20 Wee2 (ENSPEMG00000012913) #21 Ssbp1 (ENSPEMG00000011838) #22 Tas2r137 (ENSPEMG00000013488) ##23 Tas2r108 (ENSPEMG00000026064) #23 Prss37 (ENSPEMG00000017152) #24 Or9a4 (ENSPEMG00000009189) Clec5a (ENSPEMG00000017851) Tas2r138 (ENSPEMG00000001418) ##23 ENSPEMG00000008741 Mgam2-ps (ENSPEMG00000028150) Moxd2 (ENSPEMG00000005786) Prss58 (ENSPEMG00000010113) Prss59 (ENSPEMG00000016197) ENSPEMG00000025308 ENSPEMG00000027928 ENSPEMG00000028207 ENSPEMG00000008477 Upper Galilee mountains blind mole rat MODERN SPECIES 1840 Parp12 (ENSNGAG00000015925) Kdm7a (ENSNGAG00000010381) ENSNGAG00000007888 Rab19 (ENSNGAG00000017844) Mkrn1 (ENSNGAG00000019077) Dennd2a (ENSNGAG00000016156) Adck2 (ENSNGAG00000010919) Ndufb2 (ENSNGAG00000016898) Braf (ENSNGAG00000014000) ENSNGAG00000011360 Mrps33 (ENSNGAG00000014172) ENSNGAG00000021460 Agk (ENSNGAG00000007692) #19 Dennd11 (ENSNGAG00000011955) #20 ENSNGAG00000019527 Ssbp1 (ENSNGAG00000014269) #22 Tas2r137 (ENSNGAG00000016702) ##23 Tas2r108 (ENSNGAG00000015066) #23 Prss37 (ENSNGAG00000000102) #24 Or9a7 (ENSNGAG00000017910) Clec5a (ENSNGAG00000017609) Tas2r138 (ENSNGAG00000015138) ##23 ENSNGAG00000010341 Lesser Egyptian jerboa MODERN SPECIES 81 Fmc1 (ENSJJAG00000017491) Luc7l2 (ENSJJAG00000011456) Hipk2 (ENSJJAG00000019253) Tbxas1 (ENSJJAG00000020954) Parp12 (ENSJJAG00000019161) Slc37a3 (ENSJJAG00000019794) Rab19 (ENSJJAG00000015955) ENSJJAG00000010761 Dennd2a (ENSJJAG00000017109) ENSJJAG00000000905 Braf (ENSJJAG00000020559) ENSJJAG00000016723 ENSJJAG00000014217 Wee2 (ENSJJAG00000022003) #21 ENSJJAG00000001577 Ssbp1 (ENSJJAG00000016282) #22 Clec5a (ENSJJAG00000017338) ENSJJAG00000013568 ENSJJAG00000017582 Moxd2 (ENSJJAG00000011768) Prss59 (ENSJJAG00000020845) ENSJJAG00000013742 ENSJJAG00000007203 Ephb6 (ENSJJAG00000015598) Trpv6 (ENSJJAG00000010273) Trpv5 (ENSJJAG00000020226) Tas2r144 (ENSJJAG00000017432) ##23 ENSJJAG00000012066 Tmem139 (ENSJJAG00000014062) Casp2 (ENSJJAG00000008256) Zyx (ENSJJAG00000016066) Kangaroo rat MODERN SPECIES 375 Parp12 (ENSDORG00000009525) Kdm7a (ENSDORG00000012871) Slc37a3 (ENSDORG00000013791) Rab19 (ENSDORG00000006983) Mkrn1 (ENSDORG00000003480) Dennd2a (ENSDORG00000016236) Adck2 (ENSDORG00000030048) ENSDORG00000009731 Braf (ENSDORG00000009732) ENSDORG00000024624 Mrps33 (ENSDORG00000007444) ENSDORG00000026381 Agk (ENSDORG00000003733) #19 Dennd11 (ENSDORG00000003736) #20 Wee2 (ENSDORG00000015156) #21 Ssbp1 (ENSDORG00000015161) #22 Prss37 (ENSDORG00000015166) #24 Clec5a (ENSDORG00000000839) ENSDORG00000007415 ENSDORG00000007422 Moxd2 (ENSDORG00000007423) Prss58 (ENSDORG00000007425) Prss59 (ENSDORG00000027379) ENSDORG00000007428 ENSDORG00000026650 ENSDORG00000025187 ENSDORG00000024335 ENSDORG00000025731 ENSDORG00000023156 ENSDORG00000025009 ENSDORG00000008690 Primates ANCESTRAL SPECIES 12 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l Strepsirrhini ANCESTRAL SPECIES 9 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000162509 Lemuriformes ANCESTRAL SPECIES 4 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b.ib ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401.m ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000162509 ENSGT00940000154270.a.b Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 2 KDM7A (ENSMICG00000003175) SLC37A3 (ENSMICG00000015980) RAB19 (ENSMICG00000006614) MKRN1 (ENSMICG00000002114) DENND2A (ENSMICG00000002120) ADCK2 (ENSMICG00000005086) ENSMICG00000005092 BRAF (ENSMICG00000005096) MRPS33 (ENSMICG00000029049) ENSMICG00000028298 ENSMICG00000036507 TMEM178B (ENSMICG00000027101) ENSMICG00000002561 #19 DENND11 (ENSMICG00000002570) #20 WEE2 (ENSMICG00000045942) #21 ENSMICG00000031317 #22 TAS2R5 (ENSMICG00000002588) ##23 PRSS37 (ENSMICG00000043681) #24 OR9A1P (ENSMICG00000047958) CLEC5A (ENSMICG00000001118) ENSMICG00000027436 MGAM (ENSMICG00000001123) ENSMICG00000027181 ENSMICG00000001140 PRSS58 (ENSMICG00000043863) ENSMICG00000028481 ENSMICG00000026754 TRBV15 (ENSMICG00000030792) ENSMICG00000007358 ENSMICG00000047513 ENSMICG00000027701 Mouse lemur MODERN SPECIES 27 TP53I11 (ENSMICG00000033784) TSPAN18 (ENSMICG00000006504) CD82 (ENSMICG00000010264) ALX4 (ENSMICG00000048133) EXT2 (ENSMICG00000014680) ENSMICG00000028094 ACCS (ENSMICG00000007981) ACCSL (ENSMICG00000014661) ENSMICG00000034539 C11orf96 (ENSMICG00000041610) ALKBH3 (ENSMICG00000014651) HSD17B12 (ENSMICG00000014632) TTC17 (ENSMICG00000014602) ENSMICG00000014581 LRRC4C (ENSMICG00000047157) ENSMICG00000043108 #22 IFTAP (ENSMICG00000008620) TRAF6 (ENSMICG00000008604) PRR5L (ENSMICG00000047184) COMMD9 (ENSMICG00000008594) LDLRAD3 (ENSMICG00000008590) TRIM44 (ENSMICG00000008587) FJX1 (ENSMICG00000033879) PAMR1 (ENSMICG00000003733) SLC1A2 (ENSMICG00000003719) CD44 (ENSMICG00000003713) ENSMICG00000036406 PDHX (ENSMICG00000003700) APIP (ENSMICG00000003696) EHF (ENSMICG00000003694) ENSMICG00000038699 Lemuriformes_a ANCESTRAL SPECIES 51 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b.ib ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401.m ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000162509 ENSGT00940000154270.a.b ENSGT00940000154270.a.a Greater bamboo lemur MODERN SPECIES 70 SLC37A3 (ENSPSMG00000006206) RAB19 (ENSPSMG00000006175) ENSPSMG00000006161 ENSPSMG00000006137 DENND2A (ENSPSMG00000006080) ADCK2 (ENSPSMG00000006015) ENSPSMG00000006007 NDUFB2 (ENSPSMG00000005977) BRAF (ENSPSMG00000005759) ENSPSMG00000005632 ENSPSMG00000005629 TMEM178B (ENSPSMG00000005625) AGK (ENSPSMG00000005473) #19 DENND11 (ENSPSMG00000005424) #20 WEE2 (ENSPSMG00000005416) #21 SSBP1 (ENSPSMG00000005385) #22 TAS2R3 (ENSPSMG00000005351) ##23 TAS2R4 (ENSPSMG00000005349) #23 PRSS37 (ENSPSMG00000005348) #24 OR9A1P (ENSPSMG00000005343) OR9A4 (ENSPSMG00000005339) CLEC5A (ENSPSMG00000005337) TAS2R38 (ENSPSMG00000005320) ##23 ENSPSMG00000005316 MGAM (ENSPSMG00000005298) PRSS58 (ENSPSMG00000005244) ENSPSMG00000005238 ENSPSMG00000005226 ENSPSMG00000005215 ENSPSMG00000005211 TRBV9 (ENSPSMG00000005204) Coquerels sifaka MODERN SPECIES 430 ENSPCOG00000016270 SLC37A3 (ENSPCOG00000014061) RAB19 (ENSPCOG00000019113) ENSPCOG00000002890 ENSPCOG00000023686 DENND2A (ENSPCOG00000012423) ADCK2 (ENSPCOG00000019938) ENSPCOG00000018417 NDUFB2 (ENSPCOG00000008454) BRAF (ENSPCOG00000024467) ENSPCOG00000015683 TMEM178B (ENSPCOG00000020472) AGK (ENSPCOG00000025807) #19 DENND11 (ENSPCOG00000005094) #20 WEE2 (ENSPCOG00000016620) #21 SSBP1 (ENSPCOG00000021009) #22 PRSS37 (ENSPCOG00000020043) #24 ENSPCOG00000027867 MGAM (ENSPCOG00000014465) Bushbaby MODERN SPECIES 164 TBXAS1 (ENSOGAG00000008899) PARP12 (ENSOGAG00000008906) KDM7A (ENSOGAG00000007678) SLC37A3 (ENSOGAG00000029064) RAB19 (ENSOGAG00000009876) MKRN1 (ENSOGAG00000009877) DENND2A (ENSOGAG00000031447) ADCK2 (ENSOGAG00000009639) NDUFB2 (ENSOGAG00000009644) BRAF (ENSOGAG00000009646) MRPS33 (ENSOGAG00000017200) ENSOGAG00000027045 AGK (ENSOGAG00000016647) #19 DENND11 (ENSOGAG00000016654) #20 ENSOGAG00000032705 #21 SSBP1 (ENSOGAG00000016661) #22 TAS2R3 (ENSOGAG00000034844) ##23 PRSS37 (ENSOGAG00000016666) #24 OR9A1P (ENSOGAG00000025142) OR9A4 (ENSOGAG00000029429) CLEC5A (ENSOGAG00000011563) TAS2R38 (ENSOGAG00000011567) ##23 MGAM (ENSOGAG00000026892) ENSOGAG00000032017 ENSOGAG00000011568 ENSOGAG00000011575 PRSS58 (ENSOGAG00000011579) ENSOGAG00000029218 ENSOGAG00000029366 ENSOGAG00000027692 ENSOGAG00000024305 Haplorrhini ANCESTRAL SPECIES 8 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000154460.a Simiiformes ANCESTRAL SPECIES 12 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00910000146873 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT00940000162509.f ENSGT01050000244883.A.a.a.a.b.l Catarrhini ANCESTRAL SPECIES 6 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154.a ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961.c.a #19 ENSGT00910000146873 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT00940000162509.f ENSGT00940000164097 Cercopithecidae ANCESTRAL SPECIES 11 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154.a ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961.c.a #19 ENSGT00910000146873 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT00940000162509.f ENSGT00940000154460.a.r.a ENSGT00940000164097 Rhinopithecus ANCESTRAL SPECIES 141 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154.a ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961.c.a.c #19 ENSGT00910000146873 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000154460.a.r.a ENSGT00940000164097 ENSGT00940000154460.b.e.a.b ENSGT00940000154270.a.a ENSGT00940000154542.b.b.k ENSGT00940000154270.a.b.e.a.a.a.a.a Black snub-nosed monkey MODERN SPECIES 1030 MKRN1 (ENSRBIG00000027680) DENND2A (ENSRBIG00000033715) ADCK2 (ENSRBIG00000034656) NDUFB2 (ENSRBIG00000019926) BRAF (ENSRBIG00000034807) ENSRBIG00000029491 MRPS33 (ENSRBIG00000009406) TMEM178B (ENSRBIG00000021689) AGK (ENSRBIG00000032192) #19 ENSRBIG00000000681 DENND11 (ENSRBIG00000000540) #20 WEE2 (ENSRBIG00000031199) #21 SSBP1 (ENSRBIG00000028396) #22 TAS2R5 (ENSRBIG00000006452) ##23 PRSS37 (ENSRBIG00000038319) #24 OR9A4 (ENSRBIG00000031832) CLEC5A (ENSRBIG00000018399) MGAM (ENSRBIG00000027925) MGAM2 (ENSRBIG00000029407) ENSRBIG00000032600 PRSS58 (ENSRBIG00000040803) ENSRBIG00000041017 TRBV2 (ENSRBIG00000031390) TRBV3-1 (ENSRBIG00000041947) TRBV7-3 (ENSRBIG00000019786) TRBV9 (ENSRBIG00000010651) TRBV10-1 (ENSRBIG00000007349) TRBV7-4 (ENSRBIG00000037535) Golden snub-nosed monkey MODERN SPECIES 843 MKRN1 (ENSRROG00000037557) DENND2A (ENSRROG00000034382) ADCK2 (ENSRROG00000044522) NDUFB2 (ENSRROG00000029902) BRAF (ENSRROG00000010145) ENSRROG00000012111 MRPS33 (ENSRROG00000036028) TMEM178B (ENSRROG00000039953) ENSRROG00000033402 #19 ENSRROG00000021882 DENND11 (ENSRROG00000031612) #20 WEE2 (ENSRROG00000013594) #21 SSBP1 (ENSRROG00000029359) #22 TAS2R5 (ENSRROG00000019559) ##23 PRSS37 (ENSRROG00000039139) #24 OR9A4 (ENSRROG00000010627) CLEC5A (ENSRROG00000039465) ENSRROG00000038256 Cercopithecinae ANCESTRAL SPECIES 8 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154.a ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961.c.a #19 ENSGT00910000146873 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT00940000162509.f ENSGT00940000154460.a.r.a.b ENSGT00940000164097 Vervet Monkey MODERN SPECIES 13 KDM7A (ENSCSAG00000008271) ENSCSAG00000019149 SLC37A3 (ENSCSAG00000008259) RAB19 (ENSCSAG00000008251) MKRN1 (ENSCSAG00000008246) DENND2A (ENSCSAG00000008235) ADCK2 (ENSCSAG00000008230) NDUFB2 (ENSCSAG00000008224) BRAF (ENSCSAG00000008218) MRPS33 (ENSCSAG00000008211) ENSCSAG00000008209 ENSCSAG00000008203 AGK (ENSCSAG00000008178) #19 DENND11 (ENSCSAG00000008128) #20 WEE2 (ENSCSAG00000008117) #21 SSBP1 (ENSCSAG00000008102) #22 TAS2R3 (ENSCSAG00000019150) ##23 TAS2R4 (ENSCSAG00000019151) #23 TAS2R5 (ENSCSAG00000019152) ##23 PRSS37 (ENSCSAG00000008093) #24 CLEC5A (ENSCSAG00000008078) TAS2R38 (ENSCSAG00000019153) ##23 MGAM (ENSCSAG00000008027) ENSCSAG00000007937 ENSCSAG00000007921 PRSS58 (ENSCSAG00000007906) ENSCSAG00000007896 ENSCSAG00000019154 ENSCSAG00000007880 TRBV3-1 (ENSCSAG00000007874) ENSCSAG00000007869 Cercopithecinae_a ANCESTRAL SPECIES 8 ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154.a ENSGT00390000011401.k.a ENSGT00390000015299.a.b.b.a ENSGT00940000154961.c.a #19 ENSGT00910000146873 ENSGT00910000147594 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT00940000162509.f ENSGT00940000154460.a.r.a.b.b ENSGT00940000164097 ENSGT00940000162509.e.a.e Cercopithecinae_b ANCESTRAL SPECIES 11 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154.a ENSGT00390000011401.k.b ENSGT00390000011401.k.a ENSGT00390000015299.a.b.b.a ENSGT00940000154961.c.a #19 ENSGT00910000146873 ENSGT00910000147594 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT00940000154460.a.r.a.b.a ENSGT00940000154460.a.r.b ENSGT00940000154542.b.a.k.b.b ENSGT00940000154460.b.e.a.b Olive baboon MODERN SPECIES 14 PARP12 (ENSPANG00000022225) KDM7A (ENSPANG00000011491) SLC37A3 (ENSPANG00000007700) RAB19 (ENSPANG00000032483) MKRN1 (ENSPANG00000017280) DENND2A (ENSPANG00000018260) ADCK2 (ENSPANG00000007837) NDUFB2 (ENSPANG00000022006) BRAF (ENSPANG00000004965) MRPS33 (ENSPANG00000048937) TMEM178B (ENSPANG00000029596) ENSPANG00000051109 AGK (ENSPANG00000001222) #19 DENND11 (ENSPANG00000001223) #20 WEE2 (ENSPANG00000008933) #21 SSBP1 (ENSPANG00000009820) #22 TAS2R3 (ENSPANG00000037537) ##23 TAS2R4 (ENSPANG00000037718) #23 TAS2R5 (ENSPANG00000047103) ##23 PRSS37 (ENSPANG00000016705) #24 OR9A1P (ENSPANG00000048516) CLEC5A (ENSPANG00000016706) TAS2R38 (ENSPANG00000010961) ##23 ENSPANG00000038896 PRSS58 (ENSPANG00000016708) ENSPANG00000048652 TRBV5-1 (ENSPANG00000042759) TRBV7-2 (ENSPANG00000044070) TRBV7-3 (ENSPANG00000039849) TRBV9 (ENSPANG00000034082) TRBV10-1 (ENSPANG00000048649) Cercopithecinae_d ANCESTRAL SPECIES 25 ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154.a ENSGT00390000011401.k.a ENSGT00390000015299.a.b.b.a ENSGT00940000154961.c.a #19 ENSGT00910000146873 ENSGT00910000147594 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT01020000230389.b.a.a.a.b ENSGT00940000162509.f ENSGT00940000154460.a.r.a.b.b ENSGT00940000154460.a.r.a.a ENSGT00940000154460.a.r.a.b.a ENSGT00940000154460.a.r.b ENSGT00940000154542.b.a.k.b.b ENSGT00940000154460.b.e.a.b ENSGT00940000154270.a.a Drill MODERN SPECIES 1178 KDM7A (ENSMLEG00000039850) SLC37A3 (ENSMLEG00000034527) RAB19 (ENSMLEG00000032277) MKRN1 (ENSMLEG00000033107) DENND2A (ENSMLEG00000040269) ADCK2 (ENSMLEG00000038169) NDUFB2 (ENSMLEG00000034682) BRAF (ENSMLEG00000041508) ENSMLEG00000043989 TMEM178B (ENSMLEG00000030888) AGK (ENSMLEG00000043143) #19 ENSMLEG00000011841 ENSMLEG00000029548 DENND11 (ENSMLEG00000035429) #20 WEE2 (ENSMLEG00000023635) #21 SSBP1 (ENSMLEG00000039541) #22 PRSS37 (ENSMLEG00000039528) #24 CLEC5A (ENSMLEG00000014115) TAS2R38 (ENSMLEG00000011241) ##23 MGAM (ENSMLEG00000028247) Sooty mangabey MODERN SPECIES 148 PARP12 (ENSCATG00000029372) KDM7A (ENSCATG00000031213) SLC37A3 (ENSCATG00000039038) RAB19 (ENSCATG00000029739) MKRN1 (ENSCATG00000039778) DENND2A (ENSCATG00000035508) ADCK2 (ENSCATG00000029766) NDUFB2 (ENSCATG00000022754) BRAF (ENSCATG00000034341) MRPS33 (ENSCATG00000026661) TMEM178B (ENSCATG00000044426) AGK (ENSCATG00000043619) #19 ENSCATG00000000122 DENND11 (ENSCATG00000036082) #20 WEE2 (ENSCATG00000007238) #21 SSBP1 (ENSCATG00000035429) #22 PRSS37 (ENSCATG00000040618) #24 OR9A1P (ENSCATG00000018573) CLEC5A (ENSCATG00000040577) TAS2R38 (ENSCATG00000018198) ##23 MGAM (ENSCATG00000040266) MGAM2 (ENSCATG00000032547) PRSS58 (ENSCATG00000018483) ENSCATG00000019590 ENSCATG00000018350 ENSCATG00000018560 Macaca ANCESTRAL SPECIES 3 ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154.a ENSGT00390000011401.k.a ENSGT00390000015299.a.b.b.a ENSGT00940000154961.c.a #19 ENSGT00910000146873 ENSGT00910000147594 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT00940000162509.f ENSGT00940000154460.a.r.a.b.b ENSGT00940000162509.e.a.e ENSGT00940000154460.a.r.a.a Pig-tailed macaque MODERN SPECIES 479 KDM7A (ENSMNEG00000028468) SLC37A3 (ENSMNEG00000044880) RAB19 (ENSMNEG00000043765) MKRN1 (ENSMNEG00000040268) DENND2A (ENSMNEG00000036269) ADCK2 (ENSMNEG00000031935) NDUFB2 (ENSMNEG00000044806) BRAF (ENSMNEG00000024672) MRPS33 (ENSMNEG00000044224) TMEM178B (ENSMNEG00000028782) AGK (ENSMNEG00000029923) #19 ENSMNEG00000003382 ENSMNEG00000001410 DENND11 (ENSMNEG00000034919) #20 WEE2 (ENSMNEG00000032770) #21 SSBP1 (ENSMNEG00000034892) #22 PRSS37 (ENSMNEG00000045224) #24 CLEC5A (ENSMNEG00000039445) TAS2R38 (ENSMNEG00000003977) ##23 MGAM (ENSMNEG00000032400) MGAM2 (ENSMNEG00000040988) PRSS58 (ENSMNEG00000036745) ENSMNEG00000030226 ENSMNEG00000008461 ENSMNEG00000013561 TRBV7-3 (ENSMNEG00000044967) TRBV9 (ENSMNEG00000017269) TRBV10-1 (ENSMNEG00000010145) ENSMNEG00000037773 ENSMNEG00000008940 ENSMNEG00000044591 Macaca_a ANCESTRAL SPECIES 7 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154.a ENSGT00390000011401.k.b ENSGT00390000011401.k.a ENSGT00390000015299.a.b.b.a ENSGT00940000154961.c.a #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT00940000162509.f ENSGT00940000154460.a.r.a.b.b ENSGT00940000162509.e.a.e ENSGT00940000154460.a.r.a.a Rhesus MODERN SPECIES 13 PARP12 (ENSMMUG00000004224) KDM7A (ENSMMUG00000008126) ENSMMUG00000053674 SLC37A3 (ENSMMUG00000015870) RAB19 (ENSMMUG00000010419) MKRN1 (ENSMMUG00000010420) DENND2A (ENSMMUG00000042299) ADCK2 (ENSMMUG00000015282) NDUFB2 (ENSMMUG00000015284) BRAF (ENSMMUG00000042793) MRPS33 (ENSMMUG00000050535) TMEM178B (ENSMMUG00000041051) AGK (ENSMMUG00000021017) #19 DENND11 (ENSMMUG00000039865) #20 WEE2 (ENSMMUG00000044167) #21 SSBP1 (ENSMMUG00000022442) #22 TAS2R3 (ENSMMUG00000059165) ##23 TAS2R4 (ENSMMUG00000022439) #23 TAS2R5 (ENSMMUG00000056110) ##23 PRSS37 (ENSMMUG00000053855) #24 OR9A4 (ENSMMUG00000042443) CLEC5A (ENSMMUG00000016271) TAS2R38 (ENSMMUG00000055710) ##23 MGAM (ENSMMUG00000016273) MGAM2 (ENSMMUG00000019937) PRSS58 (ENSMMUG00000005931) ENSMMUG00000039273 ENSMMUG00000060990 ENSMMUG00000061142 ENSMMUG00000020332 ENSMMUG00000060238 Crab-eating macaque MODERN SPECIES 13 ENSMFAG00000055772 SLC37A3 (ENSMFAG00000038757) RAB19 (ENSMFAG00000003529) MKRN1 (ENSMFAG00000000737) DENND2A (ENSMFAG00000043828) ENSMFAG00000048196 ADCK2 (ENSMFAG00000007386) NDUFB2 (ENSMFAG00000048116) BRAF (ENSMFAG00000001069) ENSMFAG00000057380 MRPS33 (ENSMFAG00000032116) TMEM178B (ENSMFAG00000043984) AGK (ENSMFAG00000039906) #19 DENND11 (ENSMFAG00000002632) #20 WEE2 (ENSMFAG00000038833) #21 SSBP1 (ENSMFAG00000032819) #22 TAS2R3 (ENSMFAG00000063716) ##23 TAS2R4 (ENSMFAG00000061404) #23 TAS2R5 (ENSMFAG00000057048) ##23 PRSS37 (ENSMFAG00000033856) #24 OR9A4 (ENSMFAG00000042777) CLEC5A (ENSMFAG00000036311) TAS2R38 (ENSMFAG00000059261) ##23 MGAM (ENSMFAG00000000048) MGAM2 (ENSMFAG00000040766) PRSS58 (ENSMFAG00000040057) ENSMFAG00000039259 ENSMFAG00000065633 ENSMFAG00000059294 ENSMFAG00000048982 ENSMFAG00000055769 Hominoidea ANCESTRAL SPECIES 6 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154.a ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961.c.a #19 ENSGT00910000146873 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT00940000164097.f.b ENSGT00940000162509.e.a ENSGT00940000154270.a.b.e.b Gibbon MODERN SPECIES 3 PARP12 (ENSNLEG00000001802) KDM7A (ENSNLEG00000001833) SLC37A3 (ENSNLEG00000001879) RAB19 (ENSNLEG00000030911) MKRN1 (ENSNLEG00000001921) DENND2A (ENSNLEG00000002026) ADCK2 (ENSNLEG00000002068) NDUFB2 (ENSNLEG00000035760) BRAF (ENSNLEG00000002139) MRPS33 (ENSNLEG00000002278) TMEM178B (ENSNLEG00000029749) AGK (ENSNLEG00000002291) #19 ENSNLEG00000027915 DENND11 (ENSNLEG00000030404) #20 WEE2 (ENSNLEG00000002356) #21 SSBP1 (ENSNLEG00000002361) #22 TAS2R3 (ENSNLEG00000018419) ##23 PRSS37 (ENSNLEG00000002371) #24 OR9A4 (ENSNLEG00000002393) CLEC5A (ENSNLEG00000002394) TAS2R38 (ENSNLEG00000018421) ##23 MGAM (ENSNLEG00000002429) MGAM2 (ENSNLEG00000002615) PRSS58 (ENSNLEG00000002623) ENSNLEG00000028355 ENSNLEG00000035493 ENSNLEG00000035397 ENSNLEG00000032489 ENSNLEG00000031773 ENSNLEG00000034334 ENSNLEG00000034777 Hominidae ANCESTRAL SPECIES 11 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154.a ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961.c.a #19 ENSGT00910000146873 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT00940000164097.f.b ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000154460.a Orangutan MODERN SPECIES 20 TBXAS1 (ENSPPYG00000018052) PARP12 (ENSPPYG00000018053) KDM7A (ENSPPYG00000018054) SLC37A3 (ENSPPYG00000018055) RAB19 (ENSPPYG00000018056) MKRN1 (ENSPPYG00000018057) DENND2A (ENSPPYG00000018058) ADCK2 (ENSPPYG00000018059) NDUFB2 (ENSPPYG00000018060) BRAF (ENSPPYG00000018061) MRPS33 (ENSPPYG00000036255) TMEM178B (ENSPPYG00000029744) AGK (ENSPPYG00000018064) #19 DENND11 (ENSPPYG00000033394) #20 WEE2 (ENSPPYG00000018066) #21 SSBP1 (ENSPPYG00000018068) #22 TAS2R3 (ENSPPYG00000018069) ##23 TAS2R4 (ENSPPYG00000035803) #23 TAS2R5 (ENSPPYG00000018267) ##23 PRSS37 (ENSPPYG00000018071) #24 CLEC5A (ENSPPYG00000018072) ENSPPYG00000018074 MGAM2 (ENSPPYG00000018075) PRSS58 (ENSPPYG00000018076) ENSPPYG00000040295 ENSPPYG00000030426 ENSPPYG00000038450 ENSPPYG00000030363 ENSPPYG00000037063 ENSPPYG00000037561 ENSPPYG00000038711 Homo/Pan/Gorilla group ANCESTRAL SPECIES 15 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154.a ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961.c.a #19 ENSGT00910000146873 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT01020000230389.b.a.a.a.b ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000154460.a ENSGT00940000164097.f.a ENSGT00940000162509.e.a Gorilla MODERN SPECIES 20 PARP12 (ENSGGOG00000000828) KDM7A (ENSGGOG00000003842) SLC37A3 (ENSGGOG00000011497) RAB19 (ENSGGOG00000000615) ENSGGOG00000023977 DENND2A (ENSGGOG00000011405) ADCK2 (ENSGGOG00000012327) ENSGGOG00000024622 BRAF (ENSGGOG00000017089) MRPS33 (ENSGGOG00000009563) TMEM178B (ENSGGOG00000025163) AGK (ENSGGOG00000008821) #19 ENSGGOG00000037770 DENND11 (ENSGGOG00000008828) #20 WEE2 (ENSGGOG00000009609) #21 SSBP1 (ENSGGOG00000009615) #22 TAS2R3 (ENSGGOG00000009618) ##23 TAS2R4 (ENSGGOG00000023731) #23 TAS2R5 (ENSGGOG00000009622) ##23 PRSS37 (ENSGGOG00000010592) #24 OR9A4 (ENSGGOG00000006400) CLEC5A (ENSGGOG00000006401) TAS2R38 (ENSGGOG00000000269) ##23 MGAM (ENSGGOG00000003832) MGAM2 (ENSGGOG00000010479) PRSS58 (ENSGGOG00000008370) ENSGGOG00000038309 ENSGGOG00000042183 ENSGGOG00000043553 TRBV4-2 (ENSGGOG00000026368) TRBV7-3 (ENSGGOG00000006487) Homo/Pan group ANCESTRAL SPECIES 15 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154.a ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961.c.a #19 ENSGT00910000146873 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT01020000230389.b.a.a.a.b ENSGT00940000154460.a ENSGT00940000164097.f.a ENSGT00940000162509.e.a ENSGT00940000154270.a.b.e.b Human MODERN SPECIES 19 TBXAS1 (ENSG00000059377) PARP12 (ENSG00000059378) KDM7A (ENSG00000006459) SLC37A3 (ENSG00000157800) RAB19 (ENSG00000146955) MKRN1 (ENSG00000133606) DENND2A (ENSG00000146966) ADCK2 (ENSG00000133597) NDUFB2 (ENSG00000090266) BRAF (ENSG00000157764) MRPS33 (ENSG00000090263) TMEM178B (ENSG00000261115) AGK (ENSG00000006530) #19 DENND11 (ENSG00000257093) #20 WEE2 (ENSG00000214102) #21 SSBP1 (ENSG00000106028) #22 TAS2R3 (ENSG00000127362) ##23 TAS2R4 (ENSG00000127364) #23 TAS2R5 (ENSG00000127366) ##23 PRSS37 (ENSG00000165076) #24 OR9A1P (ENSG00000237621) MGAM (ENSG00000257335) OR9A4 (ENSG00000258083) CLEC5A (ENSG00000258227) TAS2R38 (ENSG00000257138) ##23 MGAM2 (ENSG00000257743) PRSS58 (ENSG00000258223) TRBV2 (ENSG00000226660) TRBV3-1 (ENSG00000237702) TRBV4-1 (ENSG00000211710) TRBV5-1 (ENSG00000211734) Pan ANCESTRAL SPECIES 13 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154.a ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961.c.a #19 ENSGT00910000146873 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT01020000230389.b.a.a.a.b ENSGT00940000154460.a ENSGT00940000164097.f.a ENSGT00940000162509.e.b.a ENSGT00940000162509.e.b.b Bonobo MODERN SPECIES 20 PARP12 (ENSPPAG00000029869) KDM7A (ENSPPAG00000036374) SLC37A3 (ENSPPAG00000033097) RAB19 (ENSPPAG00000032853) MKRN1 (ENSPPAG00000040448) DENND2A (ENSPPAG00000026508) ADCK2 (ENSPPAG00000034476) NDUFB2 (ENSPPAG00000039747) BRAF (ENSPPAG00000036004) MRPS33 (ENSPPAG00000043201) TMEM178B (ENSPPAG00000002445) AGK (ENSPPAG00000041636) #19 ENSPPAG00000029884 ENSPPAG00000043213 #20 WEE2 (ENSPPAG00000021161) #21 SSBP1 (ENSPPAG00000035223) #22 TAS2R3 (ENSPPAG00000006982) ##23 TAS2R4 (ENSPPAG00000007093) #23 TAS2R5 (ENSPPAG00000009772) ##23 PRSS37 (ENSPPAG00000033068) #24 CLEC5A (ENSPPAG00000037590) TAS2R38 (ENSPPAG00000019525) ##23 MGAM (ENSPPAG00000026007) MGAM2 (ENSPPAG00000034149) PRSS58 (ENSPPAG00000042862) ENSPPAG00000026493 ENSPPAG00000025154 ENSPPAG00000000478 ENSPPAG00000025019 TRBV7-3 (ENSPPAG00000000508) ENSPPAG00000009837 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 20 PARP12 (ENSPTRG00000019761) KDM7A (ENSPTRG00000019762) SLC37A3 (ENSPTRG00000019764) RAB19 (ENSPTRG00000019765) MKRN1 (ENSPTRG00000019766) DENND2A (ENSPTRG00000019768) ADCK2 (ENSPTRG00000019770) NDUFB2 (ENSPTRG00000019771) BRAF (ENSPTRG00000019769) MRPS33 (ENSPTRG00000019773) TMEM178B (ENSPTRG00000047632) AGK (ENSPTRG00000019775) #19 DENND11 (ENSPTRG00000019776) #20 ENSPTRG00000049781 WEE2 (ENSPTRG00000028383) #21 SSBP1 (ENSPTRG00000019778) #22 TAS2R3 (ENSPTRG00000019779) ##23 TAS2R4 (ENSPTRG00000040235) #23 TAS2R5 (ENSPTRG00000019780) ##23 PRSS37 (ENSPTRG00000019781) #24 ENSPTRG00000040014 CLEC5A (ENSPTRG00000019784) TAS2R38 (ENSPTRG00000019785) ##23 MGAM (ENSPTRG00000019786) ENSPTRG00000028382 PRSS58 (ENSPTRG00000019787) ENSPTRG00000048550 ENSPTRG00000050465 ENSPTRG00000049536 ENSPTRG00000048217 ENSPTRG00000042693 Chimpanzee MODERN SPECIES 579 ENSPTRG00000050561 ENSPTRG00000042822 ENSPTRG00000051830 ENSPTRG00000047707 ENSPTRG00000047330 ENSPTRG00000051563 ENSPTRG00000051927 ENSPTRG00000045391 ENSPTRG00000050750 #19 ENSPTRG00000044959 ENSPTRG00000044303 #20 ENSPTRG00000052697 #22 ENSPTRG00000050321 ##23 ENSPTRG00000047526 #23 ENSPTRG00000043567 ##23 ENSPTRG00000045859 #24 OR9A1P (ENSPTRG00000043919) ENSPTRG00000047806 ENSPTRG00000044670 TAS2R38 (ENSPTRG00000045865) ##23 ENSPTRG00000050880 ENSPTRG00000048454 ENSPTRG00000044453 ENSPTRG00000051456 ENSPTRG00000048222 ENSPTRG00000044775 ENSPTRG00000043817 Platyrrhini DUPLICATION Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES 10 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401.e.a ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00910000146873 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796.q.a #22 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000154460.a ENSGT00940000164097 ENSGT00940000162509.e.b ENSGT00940000162509.e.a ENSGT00940000154270.a.b.e.b ENSGT00940000154542.b.a Cebidae ANCESTRAL SPECIES 9 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401.e.a ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00910000146873 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796.q.a #22 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000154460.a ENSGT00940000164097 ENSGT00940000162509.e.b ENSGT00940000162509.e.a ENSGT00940000154270.a.b.e.b ENSGT00940000154542.b.a Cebidae_a ANCESTRAL SPECIES 33 ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401.e.a ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00910000146873 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796.q.a #22 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT00940000161540 ENSGT00940000163091 ENSGT01050000244883.A.a.a.a.b.l ENSGT01020000230389.b.a.a.a.b ENSGT00940000154460.a ENSGT00940000164097 ENSGT00940000162509.e.b ENSGT00940000154460.b.e.a.b ENSGT00940000154542.b.b.k ENSGT00940000154460.b.f ENSGT00940000162707.m.b ENSGT00940000155819.d Capuchin DUPLICATION Capuchin MODERN SPECIES 260 KDM7A (ENSCCAG00000036194) ENSCCAG00000028375 SLC37A3 (ENSCCAG00000026819) RAB19 (ENSCCAG00000029268) MKRN1 (ENSCCAG00000037582) DENND2A (ENSCCAG00000027573) ENSCCAG00000008528 NDUFB2 (ENSCCAG00000029688) BRAF (ENSCCAG00000031128) ENSCCAG00000027727 ENSCCAG00000035520 TMEM178B (ENSCCAG00000032284) AGK (ENSCCAG00000036439) #19 DENND11 (ENSCCAG00000024825) #20 WEE2 (ENSCCAG00000033355) #21 ENSCCAG00000037419 #22 PRSS37 (ENSCCAG00000030678) #24 OR9A4 (ENSCCAG00000037742) CLEC5A (ENSCCAG00000023805) ENSCCAG00000030808 Capuchin MODERN SPECIES 16 ACOT12 (ENSCCAG00000010251) SSBP2 (ENSCCAG00000029743) ATG10 (ENSCCAG00000021612) ENSCCAG00000023908 RPS23 (ENSCCAG00000022444) ENSCCAG00000032614 ENSCCAG00000032509 ENSCCAG00000037444 ENSCCAG00000035743 TMEM167A (ENSCCAG00000021704) XRCC4 (ENSCCAG00000021185) VCAN (ENSCCAG00000026158) ENSCCAG00000029740 HAPLN1 (ENSCCAG00000023370) EDIL3 (ENSCCAG00000010698) ENSCCAG00000036566 #22 COX7C (ENSCCAG00000021409) ENSCCAG00000034902 ENSCCAG00000012037 RASA1 (ENSCCAG00000027537) CCNH (ENSCCAG00000031898) ENSCCAG00000033383 TMEM161B (ENSCCAG00000025610) MEF2C (ENSCCAG00000015818) ENSCCAG00000030581 CETN3 (ENSCCAG00000021491) MBLAC2 (ENSCCAG00000027096) POLR3G (ENSCCAG00000032288) LYSMD3 (ENSCCAG00000032472) ADGRV1 (ENSCCAG00000034134) ENSCCAG00000034004 Bolivian squirrel monkey MODERN SPECIES 77 PARP12 (ENSSBOG00000035883) KDM7A (ENSSBOG00000028446) ENSSBOG00000034695 RAB19 (ENSSBOG00000027926) ENSSBOG00000023992 DENND2A (ENSSBOG00000027489) ADCK2 (ENSSBOG00000005779) ENSSBOG00000031343 BRAF (ENSSBOG00000028284) ENSSBOG00000022573 TMEM178B (ENSSBOG00000022271) AGK (ENSSBOG00000019979) #19 ENSSBOG00000031574 DENND11 (ENSSBOG00000034522) #20 WEE2 (ENSSBOG00000027383) #21 ENSSBOG00000029766 #22 PRSS37 (ENSSBOG00000009697) #24 ENSSBOG00000008809 CLEC5A (ENSSBOG00000026187) MGAM (ENSSBOG00000030990) ENSSBOG00000023030 ENSSBOG00000033951 PRSS58 (ENSSBOG00000028857) TRBV2 (ENSSBOG00000018075) TRBV4-2 (ENSSBOG00000009509) TRBV7-3 (ENSSBOG00000018082) TRBV10-1 (ENSSBOG00000016754) ENSSBOG00000018094 ENSSBOG00000014859 TRBV14 (ENSSBOG00000029655) TRBV16 (ENSSBOG00000013613) Mas night monkey MODERN SPECIES 984 PARP12 (ENSANAG00000027023) KDM7A (ENSANAG00000020956) SLC37A3 (ENSANAG00000036220) RAB19 (ENSANAG00000031005) MKRN1 (ENSANAG00000036978) DENND2A (ENSANAG00000034617) ADCK2 (ENSANAG00000031411) NDUFB2 (ENSANAG00000024539) BRAF (ENSANAG00000030685) ENSANAG00000036985 ENSANAG00000035332 AGK (ENSANAG00000034272) #19 ENSANAG00000025415 DENND11 (ENSANAG00000025741) #20 WEE2 (ENSANAG00000028062) #21 SSBP1 (ENSANAG00000021855) #22 PRSS37 (ENSANAG00000025837) #24 ENSANAG00000013359 CLEC5A (ENSANAG00000023741) MGAM (ENSANAG00000026732) MGAM2 (ENSANAG00000028334) PRSS58 (ENSANAG00000025309) TRBV2 (ENSANAG00000019846) TRBV7-3 (ENSANAG00000025212) TRBV10-1 (ENSANAG00000019734) ENSANAG00000020863 TRBV7-9 (ENSANAG00000038442) ENSANAG00000019721 TRBV16 (ENSANAG00000006214) ENSANAG00000006270 TRBV24-1 (ENSANAG00000005245) Platyrrhini ANCESTRAL SPECIES ENSGT00390000002796.q.b #22 Cebidae ANCESTRAL SPECIES ENSGT00390000002796.q.b #22 Cebidae_a ANCESTRAL SPECIES ENSGT00390000002796.q.b #22 Bolivian squirrel monkey MODERN SPECIES 43 RPS23 (ENSSBOG00000025991) ENSSBOG00000019560 ENSSBOG00000025673 ENSSBOG00000034795 ENSSBOG00000035740 ENSSBOG00000033727 TMEM167A (ENSSBOG00000031099) XRCC4 (ENSSBOG00000033444) VCAN (ENSSBOG00000030525) HAPLN1 (ENSSBOG00000020151) EDIL3 (ENSSBOG00000034196) ENSSBOG00000022503 COX7C (ENSSBOG00000023483) RASA1 (ENSSBOG00000024025) CCNH (ENSSBOG00000019490) ENSSBOG00000028202 #22 TMEM161B (ENSSBOG00000024706) ENSSBOG00000019037 ENSSBOG00000031181 MEF2C (ENSSBOG00000018897) CETN3 (ENSSBOG00000033177) MBLAC2 (ENSSBOG00000022218) ENSSBOG00000029447 LYSMD3 (ENSSBOG00000036033) ADGRV1 (ENSSBOG00000031018) ARRDC3 (ENSSBOG00000022253) NR2F1 (ENSSBOG00000021749) ENSSBOG00000034164 FAM172A (ENSSBOG00000019860) KIAA0825 (ENSSBOG00000032086) ENSSBOG00000019818 Platyrrhini ANCESTRAL SPECIES ENSGT00390000002796.r #22 Cebidae ANCESTRAL SPECIES ENSGT00390000002796.r #22 Cebidae_a ANCESTRAL SPECIES ENSGT00390000002796.r #22 Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 44 CALU (ENSSBOG00000025729) OPN1SW (ENSSBOG00000022139) CCDC136 (ENSSBOG00000028704) FLNC (ENSSBOG00000025708) ATP6V1F (ENSSBOG00000029644) ATP6V1FNB (ENSSBOG00000021896) KCP (ENSSBOG00000024349) IRF5 (ENSSBOG00000024381) TNPO3 (ENSSBOG00000029642) TSPAN33 (ENSSBOG00000026557) SMO (ENSSBOG00000034649) AHCYL2 (ENSSBOG00000027053) STRIP2 (ENSSBOG00000026530) SMKR1 (ENSSBOG00000023260) NRF1 (ENSSBOG00000022785) ENSSBOG00000016230 #22 UBE2H (ENSSBOG00000003551) ZC3HC1 (ENSSBOG00000032787) KLHDC10 (ENSSBOG00000023838) TMEM209 (ENSSBOG00000034815) SSMEM1 (ENSSBOG00000018209) CPA2 (ENSSBOG00000035827) CPA4 (ENSSBOG00000031999) CPA5 (ENSSBOG00000024319) CPA1 (ENSSBOG00000021629) CEP41 (ENSSBOG00000020133) ENSSBOG00000027781 COPG2 (ENSSBOG00000031750) TSGA13 (ENSSBOG00000026243) KLF14 (ENSSBOG00000005892) ENSSBOG00000031877 Bolivian squirrel monkey MODERN SPECIES 42 APIP (ENSSBOG00000027533) ENSSBOG00000007623 CD44 (ENSSBOG00000020740) SLC1A2 (ENSSBOG00000031126) PAMR1 (ENSSBOG00000034633) TRIM44 (ENSSBOG00000019501) LDLRAD3 (ENSSBOG00000024561) COMMD9 (ENSSBOG00000023383) PRR5L (ENSSBOG00000033062) TRAF6 (ENSSBOG00000028498) RAG1 (ENSSBOG00000016673) RAG2 (ENSSBOG00000017623) IFTAP (ENSSBOG00000025933) ENSSBOG00000033020 LRRC4C (ENSSBOG00000018653) ENSSBOG00000031892 #22 ENSSBOG00000029311 API5 (ENSSBOG00000021448) TTC17 (ENSSBOG00000027019) ENSSBOG00000026907 HSD17B12 (ENSSBOG00000023716) ALKBH3 (ENSSBOG00000023947) C11orf96 (ENSSBOG00000012454) ENSSBOG00000024546 ENSSBOG00000020375 ACCS (ENSSBOG00000025833) EXT2 (ENSSBOG00000012532) ALX4 (ENSSBOG00000032868) CD82 (ENSSBOG00000029660) TSPAN18 (ENSSBOG00000032945) TP53I11 (ENSSBOG00000028120) Bolivian squirrel monkey MODERN SPECIES 68 GASK1B (ENSSBOG00000033158) TMEM144 (ENSSBOG00000026389) ENSSBOG00000000044 RXFP1 (ENSSBOG00000024491) C4orf46 (ENSSBOG00000022705) ETFDH (ENSSBOG00000019431) ENSSBOG00000022964 FNIP2 (ENSSBOG00000021113) C4orf45 (ENSSBOG00000033692) ENSSBOG00000024250 RAPGEF2 (ENSSBOG00000033382) ENSSBOG00000030741 FSTL5 (ENSSBOG00000034377) SLC45A1 (ENSSBOG00000024389) RERE (ENSSBOG00000028927) ENSSBOG00000031412 #22 ENSSBOG00000028561 ENSSBOG00000024285 CA6 (ENSSBOG00000026428) SLC2A7 (ENSSBOG00000022852) SLC2A5 (ENSSBOG00000029662) GPR157 (ENSSBOG00000026507) H6PD (ENSSBOG00000027475) SPSB1 (ENSSBOG00000035578) SLC25A33 (ENSSBOG00000026413) TMEM201 (ENSSBOG00000035187) PIK3CD (ENSSBOG00000024261) CLSTN1 (ENSSBOG00000025761) CTNNBIP1 (ENSSBOG00000032108) ENSSBOG00000031973 NMNAT1 (ENSSBOG00000022076) Marmoset MODERN SPECIES 20 ENSCJAG00000083981 ENSCJAG00000013424 RAB19 (ENSCJAG00000013457) MKRN1 (ENSCJAG00000013474) DENND2A (ENSCJAG00000013487) ENSCJAG00000074335 ADCK2 (ENSCJAG00000013509) NDUFB2 (ENSCJAG00000013524) BRAF (ENSCJAG00000013536) ENSCJAG00000081978 ENSCJAG00000086471 TMEM178B (ENSCJAG00000013588) AGK (ENSCJAG00000013589) #19 DENND11 (ENSCJAG00000013621) #20 WEE2 (ENSCJAG00000013627) #21 SSBP1 (ENSCJAG00000013650) #22 PRSS37 (ENSCJAG00000013663) #24 ENSCJAG00000004026 ENSCJAG00000077616 CLEC5A (ENSCJAG00000087307) TAS2R38 (ENSCJAG00000013686) ##23 MGAM (ENSCJAG00000013692) MGAM2 (ENSCJAG00000036807) PRSS58 (ENSCJAG00000013813) ENSCJAG00000062999 ENSCJAG00000013826 TRBV2 (ENSCJAG00000076376) TRBV3-1 (ENSCJAG00000013834) ENSCJAG00000062848 ENSCJAG00000081723 ENSCJAG00000060470 Mas night monkey MODERN SPECIES 1054 ANKRD50 (ENSANAG00000035078) FAT4 (ENSANAG00000032727) INTU (ENSANAG00000030077) SLC25A31 (ENSANAG00000029731) HSPA4L (ENSANAG00000029426) PLK4 (ENSANAG00000033097) MFSD8 (ENSANAG00000036028) ENSANAG00000002759 ABHD18 (ENSANAG00000024144) LARP1B (ENSANAG00000034618) PGRMC2 (ENSANAG00000036565) ENSANAG00000035472 ENSANAG00000020721 ENSANAG00000029206 JADE1 (ENSANAG00000033708) ENSANAG00000018791 #22 SCLT1 (ENSANAG00000028256) C4orf33 (ENSANAG00000022551) Tarsier MODERN SPECIES 2580 MRPS33 (ENSTSYG00000030181) TMEM178B (ENSTSYG00000030068) AGK (ENSTSYG00000014497) #19 DENND11 (ENSTSYG00000014511) #20 WEE2 (ENSTSYG00000002451) #21 SSBP1 (ENSTSYG00000035240) #22 Laurasiatheria ANCESTRAL SPECIES 21 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a Eulipotyphla ANCESTRAL SPECIES 190 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 Hedgehog MODERN SPECIES 947 SSBP1 (ENSEEUG00000010837) #22 TAS2R3 (ENSEEUG00000010873) ##23 ENSEEUG00000010884 #23 Common shrew MODERN SPECIES 552 SSBP1 (ENSSARG00000011495) #22 Laurasiatheria_a ANCESTRAL SPECIES 14 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a Artiodactyla ANCESTRAL SPECIES 11 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00940000164718 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a Suina ANCESTRAL SPECIES 19 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000164097 Pig MODERN SPECIES 9 KDM7A (ENSSSCG00000016501) ENSSSCG00000039349 SLC37A3 (ENSSSCG00000032266) RAB19 (ENSSSCG00000038693) MKRN1 (ENSSSCG00000016498) DENND2A (ENSSSCG00000016497) ADCK2 (ENSSSCG00000016496) NDUFB2 (ENSSSCG00000032390) BRAF (ENSSSCG00000016494) ENSSSCG00000041343 MRPS33 (ENSSSCG00000013470) TMEM178B (ENSSSCG00000016493) AGK (ENSSSCG00000016492) #19 DENND11 (ENSSSCG00000016491) #20 WEE2 (ENSSSCG00000016489) #21 SSBP1 (ENSSSCG00000016488) #22 TAS2R3 (ENSSSCG00000028394) ##23 TAS2R4 (ENSSSCG00000021525) #23 PRSS37 (ENSSSCG00000029612) #24 ENSSSCG00000027039 OR9A1P (ENSSSCG00000061025) ENSSSCG00000036925 CLEC5A (ENSSSCG00000021933) MGAM (ENSSSCG00000034639) MGAM2 (ENSSSCG00000016487) ENSSSCG00000016486 ENSSSCG00000037885 PRSS58 (ENSSSCG00000016485) ENSSSCG00000016484 ENSSSCG00000036013 TRBV3-1 (ENSSSCG00000047566) Chacoan peccary MODERN SPECIES 115 SLC37A3 (ENSCWAG00000016357) RAB19 (ENSCWAG00000016413) MKRN1 (ENSCWAG00000016439) DENND2A (ENSCWAG00000016505) ADCK2 (ENSCWAG00000016718) NDUFB2 (ENSCWAG00000016781) BRAF (ENSCWAG00000016905) ENSCWAG00000017237 ENSCWAG00000017265 ENSCWAG00000017296 ENSCWAG00000017305 TMEM178B (ENSCWAG00000017339) AGK (ENSCWAG00000017395) #19 DENND11 (ENSCWAG00000017576) #20 WEE2 (ENSCWAG00000017685) #21 SSBP1 (ENSCWAG00000017760) #22 TAS2R3 (ENSCWAG00000017788) ##23 TAS2R4 (ENSCWAG00000017801) #23 PRSS37 (ENSCWAG00000017816) #24 OR9A1P (ENSCWAG00000017858) CLEC5A (ENSCWAG00000017884) MGAM (ENSCWAG00000018138) ENSCWAG00000018364 ENSCWAG00000018429 ENSCWAG00000018564 PRSS58 (ENSCWAG00000018631) ENSCWAG00000018658 ENSCWAG00000018704 ENSCWAG00000018734 ENSCWAG00000018754 ENSCWAG00000018776 Artiodactyla_a ANCESTRAL SPECIES 11 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00940000164718 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a Camelidae ANCESTRAL SPECIES 2 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT00940000164097 ENSGT00940000154270.a.b.q.b ENSGT00940000154542.b.a ENSGT00940000154460.b Arabian camel MODERN SPECIES 33 TBXAS1 (ENSCDRG00005003325) PARP12 (ENSCDRG00005003422) KDM7A (ENSCDRG00005003493) SLC37A3 (ENSCDRG00005003585) RAB19 (ENSCDRG00005003711) MKRN1 (ENSCDRG00005003742) DENND2A (ENSCDRG00005003834) ADCK2 (ENSCDRG00005004011) NDUFB2 (ENSCDRG00005004074) BRAF (ENSCDRG00005004131) MRPS33 (ENSCDRG00005004320) TMEM178B (ENSCDRG00005004347) AGK (ENSCDRG00005004378) #19 DENND11 (ENSCDRG00005004485) #20 WEE2 (ENSCDRG00005004501) #21 SSBP1 (ENSCDRG00005004546) #22 PRSS37 (ENSCDRG00005004595) #24 ENSCDRG00005005393 TAS2R38 (ENSCDRG00005005420) ##23 MGAM (ENSCDRG00005005484) ENSCDRG00005005559 ENSCDRG00005005603 ENSCDRG00005005685 PRSS58 (ENSCDRG00005005726) ENSCDRG00005005742 TRBV3-1 (ENSCDRG00005005751) ENSCDRG00005005756 ENSCDRG00005005773 ENSCDRG00005005806 ENSCDRG00005005812 ENSCDRG00005005821 Alpaca MODERN SPECIES 2110 AGK (ENSVPAG00000003677) #19 WEE2 (ENSVPAG00000003678) #21 SSBP1 (ENSVPAG00000003679) #22 TAS2R3 (ENSVPAG00000003682) ##23 TAS2R4 (ENSVPAG00000003683) #23 PRSS37 (ENSVPAG00000003685) #24 CLEC5A (ENSVPAG00000003686) ENSVPAG00000003687 TAS2R38 (ENSVPAG00000003688) ##23 ENSVPAG00000003690 ENSVPAG00000003691 ENSVPAG00000003692 PRSS58 (ENSVPAG00000003693) ENSVPAG00000003694 ENSVPAG00000003695 Artiodactyla_b ANCESTRAL SPECIES 11 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00940000164718 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a Pecora ANCESTRAL SPECIES 11 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.jb ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00940000164718 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a Percora_a ANCESTRAL SPECIES 11 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.jb ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00940000164718.b ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a Siberian musk deer MODERN SPECIES 84 ENSMMSG00000001940 PARP12 (ENSMMSG00000001913) KDM7A (ENSMMSG00000001870) SLC37A3 (ENSMMSG00000001841) RAB19 (ENSMMSG00000001820) ENSMMSG00000001799 DENND2A (ENSMMSG00000001773) ADCK2 (ENSMMSG00000001742) ENSMMSG00000001727 BRAF (ENSMMSG00000001692) MRPS33 (ENSMMSG00000001665) TMEM178B (ENSMMSG00000001648) AGK (ENSMMSG00000001568) #19 DENND11 (ENSMMSG00000001523) #20 WEE2 (ENSMMSG00000001502) #21 SSBP1 (ENSMMSG00000001484) #22 TAS2R3 (ENSMMSG00000001474) ##23 TAS2R4 (ENSMMSG00000001467) #23 PRSS37 (ENSMMSG00000001438) #24 OR9A4 (ENSMMSG00000001426) OR9A1P (ENSMMSG00000001418) CLEC5A (ENSMMSG00000001372) TAS2R38 (ENSMMSG00000001352) ##23 MGAM (ENSMMSG00000001266) ENSMMSG00000001157 ENSMMSG00000001130 PRSS58 (ENSMMSG00000001105) ENSMMSG00000001086 ENSMMSG00000001007 ENSMMSG00000000986 ENSMMSG00000000967 Bovidae ANCESTRAL SPECIES 12 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.jb ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00940000164718.b ENSGT00940000164718.a ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b Bovinae ANCESTRAL SPECIES 8 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.jb ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00940000164718.b.a.b ENSGT00940000164718.b.a.a ENSGT00940000164718.a ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b American bison MODERN SPECIES 3266 TBXAS1 (ENSBBBG00000015965) PARP12 (ENSBBBG00000003932) KDM7A (ENSBBBG00000007563) SLC37A3 (ENSBBBG00000015735) RAB19 (ENSBBBG00000003919) ENSBBBG00000015693 DENND2A (ENSBBBG00000015682) ADCK2 (ENSBBBG00000003435) ENSBBBG00000003447 BRAF (ENSBBBG00000015611) MRPS33 (ENSBBBG00000015506) TMEM178B (ENSBBBG00000015500) AGK (ENSBBBG00000015486) #19 DENND11 (ENSBBBG00000015364) #20 WEE2 (ENSBBBG00000015353) #21 SSBP1 (ENSBBBG00000003813) #22 TAS2R3 (ENSBBBG00000015325) ##23 TAS2R4 (ENSBBBG00000015322) #23 PRSS37 (ENSBBBG00000001257) #24 OR9A4 (ENSBBBG00000001275) ENSBBBG00000001280 ENSBBBG00000001284 ENSBBBG00000001290 CLEC5A (ENSBBBG00000001296) TAS2R38 (ENSBBBG00000001337) ##23 MGAM (ENSBBBG00000001362) ENSBBBG00000015238 ENSBBBG00000003774 ENSBBBG00000015178 PRSS58 (ENSBBBG00000003537) ENSBBBG00000003758 Bos ANCESTRAL SPECIES 8 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.jb ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00940000164718.b.a.a ENSGT00940000164718.a ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a Bos_a ANCESTRAL SPECIES 12 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.jb ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00940000164718.b.a.a ENSGT00910000144330 Domestic yak MODERN SPECIES 23 SLC37A3 (ENSBGRG00000000779) RAB19 (ENSBGRG00000000744) ENSBGRG00000000642 ENSBGRG00000000626 DENND2A (ENSBGRG00000000595) ADCK2 (ENSBGRG00000000551) ENSBGRG00000000525 BRAF (ENSBGRG00000000301) MRPS33 (ENSBGRG00000000246) ENSBGRG00000000238 ENSBGRG00000017649 ENSBGRG00000017373 AGK (ENSBGRG00000016854) #19 DENND11 (ENSBGRG00000016745) #20 WEE2 (ENSBGRG00000016334) #21 SSBP1 (ENSBGRG00000016274) #22 TAS2R3 (ENSBGRG00000016256) ##23 TAS2R4 (ENSBGRG00000016236) #23 PRSS37 (ENSBGRG00000016095) #24 ENSBGRG00000016067 ENSBGRG00000016026 ENSBGRG00000016009 ENSBGRG00000015987 ENSBGRG00000015928 VIPR2 (ENSBGRG00000015840) DYNC2I1 (ENSBGRG00000015386) ESYT2 (ENSBGRG00000014549) NCAPG2 (ENSBGRG00000014257) ENSBGRG00000014087 DNAJB6 (ENSBGRG00000013883) UBE3C (ENSBGRG00000013115) Wild yak MODERN SPECIES 1240 ENSBMUG00000014555 BRAF (ENSBMUG00000014190) MRPS33 (ENSBMUG00000013693) ENSBMUG00000013648 ENSBMUG00000013637 ENSBMUG00000013632 AGK (ENSBMUG00000013602) #19 DENND11 (ENSBMUG00000013497) #20 WEE2 (ENSBMUG00000013476) #21 SSBP1 (ENSBMUG00000013407) #22 TAS2R3 (ENSBMUG00000013363) ##23 PRSS37 (ENSBMUG00000013330) #24 OR9A4 (ENSBMUG00000013310) OR9A1P (ENSBMUG00000013278) CLEC5A (ENSBMUG00000013241) Bos_b ANCESTRAL SPECIES 7 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.jb ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718.b.a.b ENSGT00940000164718.b.a.a ENSGT00940000163413 ENSGT00940000164718.b.b ENSGT00940000164718.a ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a Cow MODERN SPECIES 23 PARP12 (ENSBTAG00000016546) KDM7A (ENSBTAG00000003495) SLC37A3 (ENSBTAG00000012239) RAB19 (ENSBTAG00000012261) MKRN1 (ENSBTAG00000008306) DENND2A (ENSBTAG00000004799) ADCK2 (ENSBTAG00000020484) NDUFB2 (ENSBTAG00000021759) BRAF (ENSBTAG00000021761) MRPS33 (ENSBTAG00000005285) ENSBTAG00000051724 ENSBTAG00000053379 AGK (ENSBTAG00000019265) #19 DENND11 (ENSBTAG00000016879) #20 WEE2 (ENSBTAG00000004658) #21 SSBP1 (ENSBTAG00000010931) #22 TAS2R3 (ENSBTAG00000016880) ##23 TAS2R4 (ENSBTAG00000018440) #23 PRSS37 (ENSBTAG00000018442) #24 ENSBTAG00000027341 OR9A4 (ENSBTAG00000054915) OR9A17 (ENSBTAG00000049043) OR9A18 (ENSBTAG00000049592) OR9A7 (ENSBTAG00000048496) CLEC5A (ENSBTAG00000020453) TAS2R38 (ENSBTAG00000024065) ##23 MGAM (ENSBTAG00000046152) MOXD2 (ENSBTAG00000003621) PRSS58 (ENSBTAG00000003628) ENSBTAG00000031236 PRSS1 (ENSBTAG00000052726) Hybrid Bos Indicus MODERN SPECIES 23 ENSBIXG00005030894 KDM7A (ENSBIXG00005030888) SLC37A3 (ENSBIXG00005030870) RAB19 (ENSBIXG00005030856) MKRN1 (ENSBIXG00005030841) DENND2A (ENSBIXG00005030818) ADCK2 (ENSBIXG00005030802) ENSBIXG00005030783 BRAF (ENSBIXG00005030730) MRPS33 (ENSBIXG00005030703) TMEM178B (ENSBIXG00005030684) ENSBIXG00005030668 AGK (ENSBIXG00005030624) #19 DENND11 (ENSBIXG00005030578) #20 WEE2 (ENSBIXG00005030568) #21 SSBP1 (ENSBIXG00005030556) #22 TAS2R3 (ENSBIXG00005030551) ##23 TAS2R4 (ENSBIXG00005030549) #23 PRSS37 (ENSBIXG00005030543) #24 ENSBIXG00005030540 ENSBIXG00005030529 ENSBIXG00005030524 OR9A4 (ENSBIXG00005030521) CLEC5A (ENSBIXG00005030512) TAS2R38 (ENSBIXG00005030506) ##23 ENSBIXG00005030502 MGAM (ENSBIXG00005008859) ENSBIXG00005009390 PRSS58 (ENSBIXG00005009415) ENSBIXG00005009425 ENSBIXG00005009443 Caprinae ANCESTRAL SPECIES 10 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.jb ENSGT00940000156154 ENSGT00390000011401.mb ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718.b ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.b.x Rambouillet Sheep MODERN SPECIES 20 HIPK2 (ENSOARG00020004569) TBXAS1 (ENSOARG00020004929) KDM7A (ENSOARG00020005079) SLC37A3 (ENSOARG00020005137) RAB19 (ENSOARG00020005219) ENSOARG00020005232 DENND2A (ENSOARG00020005286) ADCK2 (ENSOARG00020005352) NDUFB2 (ENSOARG00020005380) BRAF (ENSOARG00020005423) ENSOARG00020005487 TMEM178B (ENSOARG00020005515) AGK (ENSOARG00020005551) #19 DENND11 (ENSOARG00020005703) #20 WEE2 (ENSOARG00020005754) #21 SSBP1 (ENSOARG00020005814) #22 TAS2R3 (ENSOARG00020005838) ##23 TAS2R4 (ENSOARG00020005852) #23 PRSS37 (ENSOARG00020005886) #24 ENSOARG00020005924 ENSOARG00020005951 OR9A4 (ENSOARG00020005962) OR9A1P (ENSOARG00020000207) ENSOARG00020000219 CLEC5A (ENSOARG00020000250) TAS2R38 (ENSOARG00020000290) ##23 MGAM (ENSOARG00020000329) MGAM2 (ENSOARG00020000546) ENSOARG00020000674 PRSS58 (ENSOARG00020000699) ENSOARG00020000720 Goat DUPLICATION Goat DUPLICATION Goat MODERN SPECIES 23 KDM7A (ENSCHIG00000013546) SLC37A3 (ENSCHIG00000009119) RAB19 (ENSCHIG00000006465) ENSCHIG00000024804 DENND2A (ENSCHIG00000023014) ADCK2 (ENSCHIG00000025299) NDUFB2 (ENSCHIG00000016937) BRAF (ENSCHIG00000018376) ENSCHIG00000011022 ENSCHIG00000023631 ENSCHIG00000012235 ENSCHIG00000024421 AGK (ENSCHIG00000023107) #19 DENND11 (ENSCHIG00000015543) #20 ENSCHIG00000018792 #21 ENSCHIG00000014181 #22 TAS2R3 (ENSCHIG00000010773) ##23 TAS2R4 (ENSCHIG00000011112) #23 TAS2R5 (ENSCHIG00000013989) ##23 PRSS37 (ENSCHIG00000000473) #24 OR9A4 (ENSCHIG00000021147) ENSCHIG00000007632 ENSCHIG00000008736 CLEC5A (ENSCHIG00000019120) TAS2R38 (ENSCHIG00000010606) ##23 MGAM (ENSCHIG00000015947) MGAM2 (ENSCHIG00000015889) ENSCHIG00000025988 ENSCHIG00000018979 PRSS58 (ENSCHIG00000010583) ENSCHIG00000020117 Goat MODERN SPECIES 23 ENSCHIG00000022094 ENSCHIG00000026193 ENSCHIG00000008273 ENSCHIG00000016202 VSTM2A (ENSCHIG00000006883) ENSCHIG00000012143 ENSCHIG00000021784 ENSCHIG00000013466 #22 ENSCHIG00000023516 ENSCHIG00000026383 ENSCHIG00000013791 COBL (ENSCHIG00000022759) GRB10 (ENSCHIG00000022163) DDC (ENSCHIG00000013689) FIGNL1 (ENSCHIG00000005867) IKZF1 (ENSCHIG00000018797) SPATA48 (ENSCHIG00000015201) ZPBP (ENSCHIG00000008321) VWC2 (ENSCHIG00000020940) ENSCHIG00000008014 ABCA13 (ENSCHIG00000020126) UPP1 (ENSCHIG00000014663) C7orf57 (ENSCHIG00000013490) Goat MODERN SPECIES 10 ENSCHIG00000022085 CACNB1 (ENSCHIG00000021855) ARL5C (ENSCHIG00000008208) PLXDC1 (ENSCHIG00000024239) FBXO47 (ENSCHIG00000013068) LASP1 (ENSCHIG00000019675) ENSCHIG00000016076 C17orf98 (ENSCHIG00000010304) CWC25 (ENSCHIG00000015063) PIP4K2B (ENSCHIG00000022865) PSMB3 (ENSCHIG00000012081) PCGF2 (ENSCHIG00000018902) ENSCHIG00000002051 MLLT6 (ENSCHIG00000019829) EPOP (ENSCHIG00000008501) ENSCHIG00000019374 #22 SRCIN1 (ENSCHIG00000022297) ARHGAP23 (ENSCHIG00000023996) SOCS7 (ENSCHIG00000012449) GPR179 (ENSCHIG00000026098) MRPL45 (ENSCHIG00000014110) NPEPPS (ENSCHIG00000022782) KPNB1 (ENSCHIG00000014896) TBKBP1 (ENSCHIG00000016860) TBX21 (ENSCHIG00000021993) OSBPL7 (ENSCHIG00000023060) MRPL10 (ENSCHIG00000027033) LRRC46 (ENSCHIG00000015497) SCRN2 (ENSCHIG00000026802) SP6 (ENSCHIG00000009897) SP2 (ENSCHIG00000018648) Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 9 ENSCHYG00000019273 SLC37A3 (ENSCHYG00000019327) RAB19 (ENSCHYG00000019781) ENSCHYG00000019857 DENND2A (ENSCHYG00000020046) ADCK2 (ENSCHYG00000020204) NDUFB2 (ENSCHYG00000020392) BRAF (ENSCHYG00000020466) ENSCHYG00000020681 TMEM178B (ENSCHYG00000020754) ENSCHYG00000020854 AGK (ENSCHYG00000021039) #19 DENND11 (ENSCHYG00000021628) #20 ENSCHYG00000021735 WEE2 (ENSCHYG00000021766) #21 ENSCHYG00000021894 #22 TAS2R3 (ENSCHYG00000021939) ##23 TAS2R4 (ENSCHYG00000021959) #23 PRSS37 (ENSCHYG00000021973) #24 ENSCHYG00000022000 OR9A4 (ENSCHYG00000022018) OR9A1P (ENSCHYG00000022032) ENSCHYG00000022053 CLEC5A (ENSCHYG00000022087) TAS2R38 (ENSCHYG00000022288) ##23 MGAM2 (ENSCHYG00000022362) ENSCHYG00000022992 ENSCHYG00000023056 PRSS58 (ENSCHYG00000023073) ENSCHYG00000023095 ENSCHYG00000023122 Yarkand deer MODERN SPECIES 18 CCN2 (ENSCHYG00000021889) ENPP1 (ENSCHYG00000021685) ENSCHYG00000021655 ENPP3 (ENSCHYG00000021429) MED23 (ENSCHYG00000020859) ARG1 (ENSCHYG00000020752) ENSCHYG00000020691 AKAP7 (ENSCHYG00000020610) EPB41L2 (ENSCHYG00000018851) SMLR1 (ENSCHYG00000018712) TMEM200A (ENSCHYG00000018697) SAMD3 (ENSCHYG00000018523) L3MBTL3 (ENSCHYG00000018215) TMEM244 (ENSCHYG00000018176) ARHGAP18 (ENSCHYG00000017830) ENSCHYG00000017769 #22 LAMA2 (ENSCHYG00000016217) PTPRK (ENSCHYG00000015602) THEMIS (ENSCHYG00000015464) ENSCHYG00000015412 CYB5R4 (ENSCHYG00000014714) MRAP2 (ENSCHYG00000014617) CEP162 (ENSCHYG00000014176) TBX18 (ENSCHYG00000013985) ENSCHYG00000013935 ENSCHYG00000022979 Cetacea ANCESTRAL SPECIES 13 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.hb ENSGT00940000156154 ENSGT00390000011401.hb ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000154460.a ENSGT00940000154270.b ENSGT00940000154542.b.a ENSGT00940000154270.a.b.r ENSGT00940000154460.b Odontoceti ANCESTRAL SPECIES 12 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.hb ENSGT00940000156154 ENSGT00390000011401.hb ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000154460.a ENSGT00940000154270.b ENSGT00940000154542.b.a ENSGT00940000154270.a.b.r ENSGT00940000154460.b ENSGT00940000154542.b.b Odontoceti_a ANCESTRAL SPECIES 13 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.hb ENSGT00940000156154 ENSGT00390000011401.hb ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000161540 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000154460.a ENSGT00940000154270.b ENSGT00940000154542.b.a ENSGT00940000154270.a.b.r ENSGT00940000154460.b ENSGT00940000154542.b.b ENSGT00940000162707 Odontoceti_b ANCESTRAL SPECIES 13 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.hb.b ENSGT00940000156154 ENSGT00390000011401.hb ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000161540 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000154460.a ENSGT00940000154270.b ENSGT00940000154542.b.a ENSGT00940000154270.a.b.r ENSGT00940000154460.b ENSGT00940000154542.b.b ENSGT00940000162707 Monodontidae ANCESTRAL SPECIES 12 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.hb.b ENSGT00940000156154 ENSGT00390000011401.hb ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000161540 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000154460.a ENSGT00940000154270.b ENSGT00940000154542.b.a ENSGT00940000154270.a.b.r ENSGT00940000154460.b ENSGT00940000154542.b.b ENSGT00940000162707 ENSGT00940000163545.a Narwhal MODERN SPECIES 306 TBXAS1 (ENSMMNG00015009967) PARP12 (ENSMMNG00015009981) KDM7A (ENSMMNG00015009995) ENSMMNG00015010018 RAB19 (ENSMMNG00015010050) MKRN1 (ENSMMNG00015010057) DENND2A (ENSMMNG00015010068) ADCK2 (ENSMMNG00015010091) ENSMMNG00015010116 BRAF (ENSMMNG00015010154) ENSMMNG00015010197 TMEM178B (ENSMMNG00015010207) AGK (ENSMMNG00015010245) #19 DENND11 (ENSMMNG00015010294) #20 WEE2 (ENSMMNG00015010311) #21 SSBP1 (ENSMMNG00015010343) #22 TAS2R3 (ENSMMNG00015010363) ##23 TAS2R4 (ENSMMNG00015010372) #23 PRSS37 (ENSMMNG00015010392) #24 MGAM (ENSMMNG00015010883) ENSMMNG00015011527 ENSMMNG00015011580 ENSMMNG00015011598 ENSMMNG00015011609 ENSMMNG00015011624 ENSMMNG00015011633 ENSMMNG00015011645 ENSMMNG00015011657 ENSMMNG00015011663 ENSMMNG00015011678 ENSMMNG00015011688 Beluga whale MODERN SPECIES 72 KDM7A (ENSDLEG00000021119) ENSDLEG00000021116 ENSDLEG00000021115 RAB19 (ENSDLEG00000021111) MKRN1 (ENSDLEG00000021109) DENND2A (ENSDLEG00000021099) ADCK2 (ENSDLEG00000021096) ENSDLEG00000021093 BRAF (ENSDLEG00000021077) MRPS33 (ENSDLEG00000021075) ENSDLEG00000021072 ENSDLEG00000021067 AGK (ENSDLEG00000021057) #19 KIAA1147 (ENSDLEG00000021048) #20 WEE2 (ENSDLEG00000021040) #21 SSBP1 (ENSDLEG00000021032) #22 TAS2R4 (ENSDLEG00000021030) #23 PRSS37 (ENSDLEG00000021026) #24 MGAM (ENSDLEG00000018505) ENSDLEG00000018001 ENSDLEG00000017986 ENSDLEG00000017974 ENSDLEG00000017963 ENSDLEG00000017950 ENSDLEG00000017940 ENSDLEG00000017928 ENSDLEG00000017916 ENSDLEG00000017911 ENSDLEG00000017897 ENSDLEG00000017885 ENSDLEG00000017865 Vaquita MODERN SPECIES 20 TBXAS1 (ENSPSNG00000017057) PARP12 (ENSPSNG00000016948) KDM7A (ENSPSNG00000016893) ENSPSNG00000016803 RAB19 (ENSPSNG00000016717) MKRN1 (ENSPSNG00000016640) DENND2A (ENSPSNG00000016464) ADCK2 (ENSPSNG00000016397) ENSPSNG00000016266 BRAF (ENSPSNG00000016141) ENSPSNG00000016049 TMEM178B (ENSPSNG00000015985) AGK (ENSPSNG00000015653) #19 DENND11 (ENSPSNG00000015409) #20 WEE2 (ENSPSNG00000015224) #21 SSBP1 (ENSPSNG00000015143) #22 TAS2R4 (ENSPSNG00000014812) #23 TAS2R5 (ENSPSNG00000014749) ##23 PRSS37 (ENSPSNG00000014654) #24 MGAM (ENSPSNG00000013851) ENSPSNG00000013730 ENSPSNG00000013190 ENSPSNG00000013078 ENSPSNG00000013034 ENSPSNG00000012987 ENSPSNG00000012936 ENSPSNG00000012881 ENSPSNG00000012846 ENSPSNG00000012814 ENSPSNG00000012769 ENSPSNG00000012684 Dolphin MODERN SPECIES 2768 ENSTTRG00000009948 AGK (ENSTTRG00000009958) #19 WEE2 (ENSTTRG00000009975) #21 SSBP1 (ENSTTRG00000009987) #22 PRSS37 (ENSTTRG00000010006) #24 Sperm whale MODERN SPECIES 16 ENSPCTG00005002106 KDM7A (ENSPCTG00005002076) SLC37A3 (ENSPCTG00005001973) RAB19 (ENSPCTG00005001933) MKRN1 (ENSPCTG00005001919) ADCK2 (ENSPCTG00005001907) DENND2A (ENSPCTG00005001895) ENSPCTG00005001882 BRAF (ENSPCTG00005001762) MRPS33 (ENSPCTG00005001712) TMEM178B (ENSPCTG00005001699) AGK (ENSPCTG00005001621) #19 KIAA1147 (ENSPCTG00005001569) #20 WEE2 (ENSPCTG00005001548) #21 ENSPCTG00005001533 SSBP1 (ENSPCTG00005001511) #22 TAS2R4 (ENSPCTG00005001494) #23 PRSS37 (ENSPCTG00005001480) #24 TAS2R38 (ENSPCTG00005001461) ##23 MGAM (ENSPCTG00005001373) ENSPCTG00005001338 ENSPCTG00005001323 ENSPCTG00005001310 ENSPCTG00005001300 ENSPCTG00005001289 ENSPCTG00005001274 ENSPCTG00005001260 ENSPCTG00005001242 ENSPCTG00005001227 ENSPCTG00005001217 ENSPCTG00005001204 Blue whale DUPLICATION Blue whale MODERN SPECIES 11 PIGB (ENSBMSG00010003389) CCPG1 (ENSBMSG00010003354) PIERCE2 (ENSBMSG00010003343) DNAAF4 (ENSBMSG00010003330) PYGO1 (ENSBMSG00010003306) ENSBMSG00010003291 PRTG (ENSBMSG00010003236) ENSBMSG00010003217 NEDD4 (ENSBMSG00010003007) RFX7 (ENSBMSG00010002951) ENSBMSG00010002935 TEX9 (ENSBMSG00010002805) MNS1 (ENSBMSG00010002770) ENSBMSG00010002765 ENSBMSG00010002756 ENSBMSG00010002738 #22 TCF12 (ENSBMSG00010002642) CGNL1 (ENSBMSG00010002567) MYZAP (ENSBMSG00010002466) ENSBMSG00010002414 ALDH1A2 (ENSBMSG00010002264) AQP9 (ENSBMSG00010002216) LIPC (ENSBMSG00010002097) ADAM10 (ENSBMSG00010002053) MINDY2 (ENSBMSG00010002021) SLTM (ENSBMSG00010001996) RNF111 (ENSBMSG00010001868) CCNB2 (ENSBMSG00010001737) MYO1E (ENSBMSG00010001489) FAM81A (ENSBMSG00010001446) ENSBMSG00010001413 Blue whale MODERN SPECIES 20 PARP12 (ENSBMSG00010015492) KDM7A (ENSBMSG00010015443) SLC37A3 (ENSBMSG00010015373) RAB19 (ENSBMSG00010015336) MKRN1 (ENSBMSG00010015275) ENSBMSG00010015236 ENSBMSG00010015079 ADCK2 (ENSBMSG00010015030) ENSBMSG00010014979 BRAF (ENSBMSG00010014913) ENSBMSG00010014857 TMEM178B (ENSBMSG00010014839) AGK (ENSBMSG00010014634) #19 DENND11 (ENSBMSG00010014559) #20 WEE2 (ENSBMSG00010014473) #21 ENSBMSG00010014422 #22 PRSS37 (ENSBMSG00010014322) #24 MGAM (ENSBMSG00010014030) ENSBMSG00010013939 PRSS58 (ENSBMSG00010013894) ENSBMSG00010013865 ENSBMSG00010013824 ENSBMSG00010017998 ENSBMSG00010017982 ENSBMSG00010017955 ENSBMSG00010017937 ENSBMSG00010017918 ENSBMSG00010017909 ENSBMSG00010017899 ENSBMSG00010017881 ENSBMSG00010017795 Laurasiatheria_b ANCESTRAL SPECIES 14 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a Carnivora ANCESTRAL SPECIES 15 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413.d ENSGT00940000163413.c ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b Felidae ANCESTRAL SPECIES 13 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000017491.t.u.k ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413.c ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000164097 Panthera ANCESTRAL SPECIES 1 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000017491.t.u.k ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413.c ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000164097 Tiger MODERN SPECIES 338 ENSPTIG00000006995 AGK (ENSPTIG00000007059) #19 DENND11 (ENSPTIG00000007425) #20 WEE2 (ENSPTIG00000007441) #21 SSBP1 (ENSPTIG00000007543) #22 TAS2R3 (ENSPTIG00000008623) ##23 PRSS37 (ENSPTIG00000007671) #24 OR9A1P (ENSPTIG00000008631) OR9A4 (ENSPTIG00000008641) CLEC5A (ENSPTIG00000007743) TAS2R38 (ENSPTIG00000008646) ##23 MGAM (ENSPTIG00000007791) MGAM2 (ENSPTIG00000007875) ENSPTIG00000007941 ENSPTIG00000007959 PRSS58 (ENSPTIG00000007966) ENSPTIG00000007980 ENSPTIG00000007990 ENSPTIG00000007999 ENSPTIG00000008004 Panthera_a ANCESTRAL SPECIES ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000017491.t.u.k ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483 #24 ENSGT00940000163413.d ENSGT00940000164718 ENSGT00940000163413.c ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l lion MODERN SPECIES 2 PARP12 (ENSPLOG00000006216) KDM7A (ENSPLOG00000006272) SLC37A3 (ENSPLOG00000006322) MKRN1 (ENSPLOG00000006377) RAB19 (ENSPLOG00000006421) DENND2A (ENSPLOG00000006462) ADCK2 (ENSPLOG00000006564) NDUFB2 (ENSPLOG00000006615) BRAF (ENSPLOG00000006659) ENSPLOG00000006711 MRPS33 (ENSPLOG00000006727) TMEM178B (ENSPLOG00000006748) AGK (ENSPLOG00000006870) #19 DENND11 (ENSPLOG00000007062) #20 WEE2 (ENSPLOG00000007110) #21 SSBP1 (ENSPLOG00000007153) #22 TAS2R3 (ENSPLOG00000007169) ##23 TAS2R4 (ENSPLOG00000007183) #23 PRSS37 (ENSPLOG00000007202) #24 ENSPLOG00000007235 ENSPLOG00000007265 OR9A4 (ENSPLOG00000007287) CLEC5A (ENSPLOG00000007322) TAS2R38 (ENSPLOG00000007379) ##23 MGAM (ENSPLOG00000007975) ENSPLOG00000010301 ENSPLOG00000010372 ENSPLOG00000010445 PRSS58 (ENSPLOG00000010461) ENSPLOG00000010506 ENSPLOG00000010541 leopard MODERN SPECIES 23 PARP12 (ENSPPRG00000024763) KDM7A (ENSPPRG00000024771) SLC37A3 (ENSPPRG00000024774) RAB19 (ENSPPRG00000024782) MKRN1 (ENSPPRG00000024785) DENND2A (ENSPPRG00000024795) ADCK2 (ENSPPRG00000024802) NDUFB2 (ENSPPRG00000024808) BRAF (ENSPPRG00000024821) ENSPPRG00000024823 MRPS33 (ENSPPRG00000024825) TMEM178B (ENSPPRG00000024828) ENSPPRG00000024832 #19 DENND11 (ENSPPRG00000024839) #20 WEE2 (ENSPPRG00000024844) #21 SSBP1 (ENSPPRG00000024849) #22 TAS2R3 (ENSPPRG00000019421) ##23 TAS2R4 (ENSPPRG00000019408) #23 PRSS37 (ENSPPRG00000024857) #24 ENSPPRG00000019397 ENSPPRG00000019380 CLEC5A (ENSPPRG00000024864) MGAM (ENSPPRG00000024877) MGAM2 (ENSPPRG00000024888) ENSPPRG00000024900 ENSPPRG00000019361 PRSS58 (ENSPPRG00000024903) ENSPPRG00000024907 ENSPPRG00000024914 ENSPPRG00000024917 ENSPPRG00000019350 Cat MODERN SPECIES 1 PARP12 (ENSFCAG00000026388) KDM7A (ENSFCAG00000030285) SLC37A3 (ENSFCAG00000013041) MKRN1 (ENSFCAG00000024942) RAB19 (ENSFCAG00000043746) DENND2A (ENSFCAG00000012839) ADCK2 (ENSFCAG00000028490) NDUFB2 (ENSFCAG00000036666) BRAF (ENSFCAG00000012847) ENSFCAG00000034313 MRPS33 (ENSFCAG00000029690) TMEM178B (ENSFCAG00000040899) AGK (ENSFCAG00000005448) #19 DENND11 (ENSFCAG00000018973) #20 WEE2 (ENSFCAG00000018517) #21 ENSFCAG00000035640 #22 PRSS37 (ENSFCAG00000006573) #24 OR9A1P (ENSFCAG00000042976) OR9A4 (ENSFCAG00000046309) CLEC5A (ENSFCAG00000008023) TAS2R38 (ENSFCAG00000023407) ##23 MGAM (ENSFCAG00000024379) ENSFCAG00000018949 ENSFCAG00000022750 MOXD2 (ENSFCAG00000051435) ENSFCAG00000028392 PRSS58 (ENSFCAG00000001368) ENSFCAG00000024016 ENSFCAG00000052478 ENSFCAG00000049851 ENSFCAG00000050333 Caniformia ANCESTRAL SPECIES 11 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413.d ENSGT00940000163413.c ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b Canidae DUPLICATION Canidae ANCESTRAL SPECIES ENSGT00390000002796.y #22 Canis_lupus ANCESTRAL SPECIES ENSGT00390000002796.y #22 Dog MODERN SPECIES 8 CCT7 (ENSCAFG00845017858) FBXO41 (ENSCAFG00845018174) PRADC1 (ENSCAFG00845018255) SMYD5 (ENSCAFG00845018316) NOTO (ENSCAFG00845018376) RAB11FIP5 (ENSCAFG00845018418) SFXN5 (ENSCAFG00845018555) EMX1 (ENSCAFG00845018828) SPR (ENSCAFG00845018873) EXOC6B (ENSCAFG00845018998) CYP26B1 (ENSCAFG00845019592) DYSF (ENSCAFG00845019878) ZNF638 (ENSCAFG00845020789) PAIP2B (ENSCAFG00845021756) NAGK (ENSCAFG00845021892) SSBP1 (ENSCAFG00845022014) #22 PHTF1 (ENSCAFG00845022110) ENSCAFG00845022567 PTPN22 (ENSCAFG00845022702) BCL2L15 (ENSCAFG00845023051) AP4B1 (ENSCAFG00845023163) DCLRE1B (ENSCAFG00845023268) HIPK1 (ENSCAFG00845023430) OLFML3 (ENSCAFG00845023748) SYT6 (ENSCAFG00845023804) ENSCAFG00845023874 TRIM33 (ENSCAFG00845024048) BCAS2 (ENSCAFG00845024283) DENND2C (ENSCAFG00845024386) AMPD1 (ENSCAFG00845025118) NRAS (ENSCAFG00845026380) Dingo MODERN SPECIES 389 TBXAS1 (ENSCAFG00020022217) PARP12 (ENSCAFG00020022200) KDM7A (ENSCAFG00020022158) SLC37A3 (ENSCAFG00020022145) RAB19 (ENSCAFG00020022144) ENSCAFG00020022139 DENND2A (ENSCAFG00020022101) ADCK2 (ENSCAFG00020022086) NDUFB2 (ENSCAFG00020022084) BRAF (ENSCAFG00020021321) ENSCAFG00020021206 TMEM178B (ENSCAFG00020021193) AGK (ENSCAFG00020021182) #19 DENND11 (ENSCAFG00020021162) #20 WEE2 (ENSCAFG00020021149) #21 SSBP1 (ENSCAFG00020021147) #22 TAS2R3 (ENSCAFG00020021146) ##23 TAS2R4 (ENSCAFG00020021144) #23 TAS2R5 (ENSCAFG00020021140) ##23 PRSS37 (ENSCAFG00020021120) #24 OR9A1P (ENSCAFG00020021109) ENSCAFG00020021108 ENSCAFG00020021104 TAS2R38 (ENSCAFG00020021100) ##23 MGAM (ENSCAFG00020021057) ENSCAFG00020021052 ENSCAFG00020021050 PRSS58 (ENSCAFG00020021048) ENSCAFG00020021045 ENSCAFG00020021043 ENSCAFG00020021042 Canidae ANCESTRAL SPECIES 49 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401.bb ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796.z #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413.d ENSGT00940000163413.c ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a Red fox MODERN SPECIES 167 PARP12 (ENSVVUG00000001841) KDM7A (ENSVVUG00000001798) ENSVVUG00000001761 RAB19 (ENSVVUG00000001737) MKRN1 (ENSVVUG00000001720) DENND2A (ENSVVUG00000001629) ADCK2 (ENSVVUG00000001594) NDUFB2 (ENSVVUG00000001582) BRAF (ENSVVUG00000001562) MRPS33 (ENSVVUG00000001526) TMEM178B (ENSVVUG00000001378) AGK (ENSVVUG00000027904) #19 DENND11 (ENSVVUG00000027896) #20 WEE2 (ENSVVUG00000027893) #21 PRSS37 (ENSVVUG00000027887) #24 SSBP1 (ENSVVUG00000027882) #22 CLEC5A (ENSVVUG00000027880) TAS2R38 (ENSVVUG00000027879) ##23 MGAM (ENSVVUG00000027858) MGAM2 (ENSVVUG00000027701) ENSVVUG00000027677 ENSVVUG00000027675 PRSS58 (ENSVVUG00000027673) ENSVVUG00000027672 ENSVVUG00000027670 ENSVVUG00000027667 ENSVVUG00000027666 ENSVVUG00000027664 ENSVVUG00000027663 ENSVVUG00000027660 ENSVVUG00000027659 Canis_lupus ANCESTRAL SPECIES 42 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401.bb ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796.z #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413.d ENSGT00940000163413.c ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a Dog MODERN SPECIES 7 TBXAS1 (ENSCAFG00845031075) PARP12 (ENSCAFG00845031074) KDM7A (ENSCAFG00845031073) SLC37A3 (ENSCAFG00845031071) RAB19 (ENSCAFG00845031070) MKRN1 (ENSCAFG00845031068) DENND2A (ENSCAFG00845031062) ADCK2 (ENSCAFG00845031052) NDUFB2 (ENSCAFG00845031044) BRAF (ENSCAFG00845031038) MRPS33 (ENSCAFG00845031033) TMEM178B (ENSCAFG00845031029) AGK (ENSCAFG00845030997) #19 DENND11 (ENSCAFG00845030968) #20 WEE2 (ENSCAFG00845030950) #21 SSBP1 (ENSCAFG00845030936) #22 TAS2R3 (ENSCAFG00845030932) ##23 TAS2R4 (ENSCAFG00845030928) #23 TAS2R5 (ENSCAFG00845030924) ##23 PRSS37 (ENSCAFG00845030911) #24 ENSCAFG00845030869 OR9A4C (ENSCAFG00845030848) OR9A4 (ENSCAFG00845030840) ENSCAFG00845030818 TAS2R38 (ENSCAFG00845030800) ##23 MGAM (ENSCAFG00845024416) MGAM2 (ENSCAFG00845020250) MOXD2 (ENSCAFG00845020081) ENSCAFG00845020044 PRSS58 (ENSCAFG00845019999) ENSCAFG00845019855 Caniformia_b ANCESTRAL SPECIES 9 ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT01030000238403 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413.d ENSGT00940000163413.c ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b Mustelinae ANCESTRAL SPECIES 9 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT01030000238403 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT01050000244883.A.a.a.a.b.l.b ENSGT01020000230389.b.a.a.a.a ENSGT00940000164718 ENSGT00940000163413.d ENSGT00940000163413.c ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a Ferret MODERN SPECIES 168 PARP12 (ENSMPUG00000003682) KDM7A (ENSMPUG00000003567) SLC37A3 (ENSMPUG00000003468) RAB19 (ENSMPUG00000003462) MKRN1 (ENSMPUG00000003453) DENND2A (ENSMPUG00000003441) ADCK2 (ENSMPUG00000003434) ENSMPUG00000003423 BRAF (ENSMPUG00000003411) MRPS33 (ENSMPUG00000003408) TMEM178B (ENSMPUG00000003400) ENSMPUG00000003395 AGK (ENSMPUG00000003382) #19 DENND11 (ENSMPUG00000003339) #20 WEE2 (ENSMPUG00000003262) #21 SSBP1 (ENSMPUG00000003257) #22 TAS2R3 (ENSMPUG00000018738) ##23 TAS2R5 (ENSMPUG00000018736) ##23 PRSS37 (ENSMPUG00000003229) #24 ENSMPUG00000003225 OR9A1P (ENSMPUG00000018734) ENSMPUG00000018733 ENSMPUG00000018730 CLEC5A (ENSMPUG00000003222) TAS2R38 (ENSMPUG00000018729) ##23 MGAM (ENSMPUG00000003017) ENSMPUG00000003013 ENSMPUG00000003007 ENSMPUG00000003004 ENSMPUG00000002940 PRSS58 (ENSMPUG00000002936) American mink MODERN SPECIES 3 PARP12 (ENSNVIG00000021615) KDM7A (ENSNVIG00000021549) SLC37A3 (ENSNVIG00000021517) RAB19 (ENSNVIG00000021506) MKRN1 (ENSNVIG00000021491) DENND2A (ENSNVIG00000021437) ADCK2 (ENSNVIG00000021423) NDUFB2 (ENSNVIG00000021401) BRAF (ENSNVIG00000021330) MRPS33 (ENSNVIG00000021319) ENSNVIG00000021311 TMEM178B (ENSNVIG00000021305) AGK (ENSNVIG00000021096) #19 DENND11 (ENSNVIG00000021077) #20 WEE2 (ENSNVIG00000021053) #21 SSBP (ENSNVIG00000021026) #22 TAS2R3 (ENSNVIG00000021023) ##23 TAS2R4 (ENSNVIG00000021019) #23 TAS2R5 (ENSNVIG00000021015) ##23 PRSS37 (ENSNVIG00000021001) #24 OR9A1P (ENSNVIG00000021000) OR9A4 (ENSNVIG00000020980) CLEC5A (ENSNVIG00000020950) TAS2R38 (ENSNVIG00000020941) ##23 MGAM (ENSNVIG00000020823) ENSNVIG00000020796 ENSNVIG00000020758 ENSNVIG00000020745 PRSS58 (ENSNVIG00000020715) ENSNVIG00000020711 ENSNVIG00000020082 Ursidae DUPLICATION Ursidae ANCESTRAL SPECIES 12 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT01030000238403 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796.`b #22 ENSGT00390000002796.ab #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163595.c.a.b.a ENSGT00940000154460.a ENSGT01050000244883.A.a.a.a.b.l.c ENSGT01020000230389.b.a.a.a.a ENSGT00940000163413.d ENSGT00940000164718 ENSGT00940000163413.c ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 Ursus ANCESTRAL SPECIES 35 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT01030000238403 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796.`b #22 ENSGT00390000002796.ab #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413.c ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l.c.c American black bear MODERN SPECIES 6929 WEE2 (ENSUAMG00000014168) #21 SSBP1 (ENSUAMG00000014171) #22 Polar bear MODERN SPECIES 326 CSMD1 (ENSUMAG00000023133) MYOM2 (ENSUMAG00000023171) ARHGEF10 (ENSUMAG00000023234) CLN8 (ENSUMAG00000023287) DLGAP2 (ENSUMAG00000023290) ENSUMAG00000023332 TDRP (ENSUMAG00000023334) FBXO25 (ENSUMAG00000023338) ENSUMAG00000023340 ENSUMAG00000023344 ENSUMAG00000023345 #22 ZNF596 (ENSUMAG00000023347) OR11A1 (ENSUMAG00000023351) ENSUMAG00000023353 OR12D3 (ENSUMAG00000023356) OR14J1 (ENSUMAG00000023357) ENSUMAG00000023358 ENSUMAG00000023359 ENSUMAG00000023360 ENSUMAG00000023361 ENSUMAG00000023362 ENSUMAG00000023364 ENSUMAG00000023365 ENSUMAG00000023366 GPM6A (ENSUMAG00000023367) WDR17 (ENSUMAG00000023369) Giant Panda MODERN SPECIES TBXAS1 (ENSAMEG00000017877) PARP12 (ENSAMEG00000017865) KDM7A (ENSAMEG00000017856) ENSAMEG00000017845 RAB19 (ENSAMEG00000017842) MKRN1 (ENSAMEG00000017832) DENND2A (ENSAMEG00000017824) ADCK2 (ENSAMEG00000017823) NDUFB2 (ENSAMEG00000015328) BRAF (ENSAMEG00000015264) MRPS33 (ENSAMEG00000015259) TMEM178B (ENSAMEG00000029552) ENSAMEG00000015205 #19 DENND11 (ENSAMEG00000015190) #20 WEE2 (ENSAMEG00000015162) #21 SSBP1 (ENSAMEG00000015145) #22 TAS2R3 (ENSAMEG00000019797) ##23 TAS2R4 (ENSAMEG00000019793) #23 PRSS37 (ENSAMEG00000015123) #24 ENSAMEG00000015114 OR9A4 (ENSAMEG00000028272) CLEC5A (ENSAMEG00000024594) TAS2R38 (ENSAMEG00000015098) ##23 ENSAMEG00000014965 ENSAMEG00000014963 ENSAMEG00000014918 ENSAMEG00000028202 PRSS58 (ENSAMEG00000014895) ENSAMEG00000014890 ENSAMEG00000006287 TRBV2 (ENSAMEG00000023747) Ursidae ANCESTRAL SPECIES 12 ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT01030000238403 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796.`b #22 ENSGT00390000002796.ab #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163595.c.a.b.a ENSGT00940000154460.a ENSGT01050000244883.A.a.a.a.b.l.c ENSGT01020000230389.b.a.a.a.a ENSGT00940000163413.d ENSGT00940000164718 ENSGT00940000163413.c ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 Ursus ANCESTRAL SPECIES 35 ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT01030000238403 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796.`b #22 ENSGT00390000002796.ab #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413.c ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l.c.c ENSGT01050000244883.A.a.a.a.b.l.c.d Polar bear MODERN SPECIES 205 PARP12 (ENSUMAG00000015082) KDM7A (ENSUMAG00000015072) ENSUMAG00000015059 RAB19 (ENSUMAG00000015057) MKRN1 (ENSUMAG00000015046) DENND2A (ENSUMAG00000015036) ADCK2 (ENSUMAG00000015028) NDUFB2 (ENSUMAG00000015021) BRAF (ENSUMAG00000015019) MRPS33 (ENSUMAG00000015017) ENSUMAG00000015014 TMEM178B (ENSUMAG00000015005) AGK (ENSUMAG00000014998) #19 DENND11 (ENSUMAG00000014996) #20 WEE2 (ENSUMAG00000014990) #21 ENSUMAG00000014987 #22 TAS2R3 (ENSUMAG00000014985) ##23 TAS2R4 (ENSUMAG00000014982) #23 TAS2R5 (ENSUMAG00000014980) ##23 PRSS37 (ENSUMAG00000014967) #24 ENSUMAG00000014960 OR9A1P (ENSUMAG00000014949) OR9A4 (ENSUMAG00000014934) CLEC5A (ENSUMAG00000014912) TAS2R38 (ENSUMAG00000014900) ##23 MGAM (ENSUMAG00000012557) ENSUMAG00000012289 ENSUMAG00000012286 PRSS58 (ENSUMAG00000012282) ENSUMAG00000012275 ENSUMAG00000012263 Laurasiatheria_c ANCESTRAL SPECIES 13 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l Chiroptera ANCESTRAL SPECIES 41 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 Microchiroptera ANCESTRAL SPECIES 23 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000164097 ENSGT00940000154270.a.a Greater horseshoe bat MODERN SPECIES 18 PARP12 (ENSRFEG00010006269) KDM7A (ENSRFEG00010006211) ENSRFEG00010006138 RAB19 (ENSRFEG00010006080) ENSRFEG00010006001 DENND2A (ENSRFEG00010021027) ADCK2 (ENSRFEG00010020985) ENSRFEG00010020971 NDUFB2 (ENSRFEG00010020950) BRAF (ENSRFEG00010020876) MRPS33 (ENSRFEG00010020851) TMEM178B (ENSRFEG00010020840) AGK (ENSRFEG00010020764) #19 DENND11 (ENSRFEG00010020723) #20 WEE2 (ENSRFEG00010020683) #21 SSBP1 (ENSRFEG00010020645) #22 TAS2R3 (ENSRFEG00010020628) ##23 TAS2R4 (ENSRFEG00010020619) #23 PRSS37 (ENSRFEG00010020580) #24 CLEC5A (ENSRFEG00010020445) TAS2R38 (ENSRFEG00010020417) ##23 MGAM (ENSRFEG00010011361) ENSRFEG00010010486 ENSRFEG00010010272 ENSRFEG00010010246 PRSS58 (ENSRFEG00010010194) ENSRFEG00010010175 ENSRFEG00010010153 TRBV3-1 (ENSRFEG00010010134) TRBV9 (ENSRFEG00010010109) ENSRFEG00010010095 Microbat MODERN SPECIES 1078 RAB19 (ENSMLUG00000002031) ENSMLUG00000006053 DENND2A (ENSMLUG00000006056) ENSMLUG00000029101 ADCK2 (ENSMLUG00000007534) NDUFB2 (ENSMLUG00000014604) BRAF (ENSMLUG00000007544) ENSMLUG00000013994 ENSMLUG00000026797 ENSMLUG00000030661 ENSMLUG00000007083 ENSMLUG00000030506 AGK (ENSMLUG00000007092) #19 DENND11 (ENSMLUG00000007121) #20 WEE2 (ENSMLUG00000029750) #21 SSBP1 (ENSMLUG00000007133) #22 TAS2R3 (ENSMLUG00000007928) ##23 TAS2R4 (ENSMLUG00000028078) #23 TAS2R5 (ENSMLUG00000006021) ##23 PRSS37 (ENSMLUG00000006019) #24 ENSMLUG00000023258 OR9A1P (ENSMLUG00000027938) CLEC5A (ENSMLUG00000017259) TAS2R38 (ENSMLUG00000013296) ##23 MGAM (ENSMLUG00000017263) ENSMLUG00000008548 ENSMLUG00000029346 PRSS58 (ENSMLUG00000016816) ENSMLUG00000029306 ENSMLUG00000024021 ENSMLUG00000022214 Megabat MODERN SPECIES 2886 AGK (ENSPVAG00000006217) #19 DENND11 (ENSPVAG00000006219) #20 WEE2 (ENSPVAG00000006220) #21 SSBP1 (ENSPVAG00000006221) #22 Equus ANCESTRAL SPECIES 13 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000161483 #24 ENSGT00940000164718 ENSGT00940000163413 ENSGT00910000144330 ENSGT00940000161540 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT00730000111153.oc ENSGT01050000244883.A.a.a.a.a.d ENSGT00940000162480.a.d.a ENSGT00940000163595.c.b.b ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000164097.h.b Donkey DUPLICATION Donkey MODERN SPECIES 7 DPYD (ENSEASG00005015723) PTBP2 (ENSEASG00005015719) RWDD3 (ENSEASG00005015716) TLCD4 (ENSEASG00005026339) ALG14 (ENSEASG00005034081) CNN3 (ENSEASG00005032123) SLC44A3 (ENSEASG00005015701) F3 (ENSEASG00005015695) ABCD3 (ENSEASG00005015685) ARHGAP29 (ENSEASG00005015647) ABCA4 (ENSEASG00005015609) GCLM (ENSEASG00005015597) DNTTIP2 (ENSEASG00005015594) BCAR3 (ENSEASG00005015591) FNBP1L (ENSEASG00005015587) ENSEASG00005015589 #22 DR1 (ENSEASG00005025520) ENSEASG00005015583 CCDC18 (ENSEASG00005015570) TMED5 (ENSEASG00005034283) MTF2 (ENSEASG00005015530) DIPK1A (ENSEASG00005030243) ENSEASG00005015515 EVI5 (ENSEASG00005015514) GFI1 (ENSEASG00005015509) RPAP2 (ENSEASG00005015507) GLMN (ENSEASG00005015506) C1orf146 (ENSEASG00005037463) ENSEASG00005032361 ENSEASG00005037362 ENSEASG00005015501 Donkey MODERN SPECIES PARP12 (ENSEASG00005009926) KDM7A (ENSEASG00005009924) SLC37A3 (ENSEASG00005009922) RAB19 (ENSEASG00005009919) MKRN1 (ENSEASG00005009917) DENND2A (ENSEASG00005009911) ADCK2 (ENSEASG00005009907) NDUFB2 (ENSEASG00005009906) BRAF (ENSEASG00005009899) MRPS33 (ENSEASG00005009896) TMEM178B (ENSEASG00005009886) ENSEASG00005009882 AGK (ENSEASG00005009879) #19 DENND11 (ENSEASG00005009876) #20 WEE2 (ENSEASG00005009874) #21 ENSEASG00005009871 #22 PRSS37 (ENSEASG00005009865) #24 OR9A1P (ENSEASG00005032409) OR9A4 (ENSEASG00005033752) CLEC5A (ENSEASG00005009851) ENSEASG00005009837 MGAM2 (ENSEASG00005030719) ENSEASG00005009818 ENSEASG00005030688 PRSS58 (ENSEASG00005009810) ENSEASG00005009806 ENSEASG00005035145 ENSEASG00005036533 ENSEASG00005009470 ENSEASG00005031156 ENSEASG00005036725 Atlantogenata ANCESTRAL SPECIES 60 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000183077.a.a.a.a.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT00940000161540 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b ENSGT00940000162509 ENSGT00940000154460.a ENSGT00940000163545.a ENSGT00530000064313.b Afrotheria ANCESTRAL SPECIES 81 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT00940000161540 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b ENSGT00940000162509 ENSGT00940000154542.b ENSGT00940000154460.b ENSGT00940000162707 Afrotheria_a ANCESTRAL SPECIES 82 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 ENSGT01100000263477.A.a.b ##23 ENSGT00940000161483 #24 ENSGT00940000163413 ENSGT00910000144330 ENSGT00940000161540 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b ENSGT00940000162509 ENSGT00940000154542.b ENSGT00940000154460.b ENSGT00940000162707 Elephant MODERN SPECIES 578 TBXAS1 (ENSLAFG00000005713) PARP12 (ENSLAFG00000005717) KDM7A (ENSLAFG00000005723) SLC37A3 (ENSLAFG00000018405) RAB19 (ENSLAFG00000006237) MKRN1 (ENSLAFG00000018408) DENND2A (ENSLAFG00000013759) ADCK2 (ENSLAFG00000021772) NDUFB2 (ENSLAFG00000009098) BRAF (ENSLAFG00000016753) MRPS33 (ENSLAFG00000002433) ENSLAFG00000026888 AGK (ENSLAFG00000002479) #19 DENND11 (ENSLAFG00000011516) #20 WEE2 (ENSLAFG00000011523) #21 SSBP1 (ENSLAFG00000011526) #22 TAS2R3 (ENSLAFG00000011535) ##23 TAS2R4 (ENSLAFG00000016501) #23 PRSS37 (ENSLAFG00000011538) #24 OR9A4 (ENSLAFG00000021730) CLEC5A (ENSLAFG00000018406) MGAM (ENSLAFG00000021508) ENSLAFG00000016635 PRSS58 (ENSLAFG00000018442) ENSLAFG00000013135 ENSLAFG00000022480 ENSLAFG00000028007 ENSLAFG00000028520 ENSLAFG00000020847 ENSLAFG00000020776 ENSLAFG00000028593 Hyrax MODERN SPECIES 7270 WEE2 (ENSPCAG00000003311) #21 SSBP1 (ENSPCAG00000003383) #22 Xenarthra ANCESTRAL SPECIES 961 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b ##23 ENSGT01100000263477.C #23 Armadillo DUPLICATION Armadillo DUPLICATION Armadillo MODERN SPECIES 4151 KYNU (ENSDNOG00000037199) ARHGAP15 (ENSDNOG00000014973) GTDC1 (ENSDNOG00000033624) ZEB2 (ENSDNOG00000039558) ACVR2A (ENSDNOG00000009781) ORC4 (ENSDNOG00000009805) ENSDNOG00000040740 #22 MBD5 (ENSDNOG00000017491) Armadillo MODERN SPECIES 2175 ENSDNOG00000038246 #22 CSMD1 (ENSDNOG00000002295) ENSDNOG00000041059 Armadillo MODERN SPECIES 1560 DENND11 (ENSDNOG00000015863) #20 WEE2 (ENSDNOG00000041471) #21 ENSDNOG00000015867 #22 TAS2R3 (ENSDNOG00000049128) ##23 TAS2R4 (ENSDNOG00000017475) #23 Marsupialia ANCESTRAL SPECIES 4 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b.b.b ##23 ENSGT01100000263477.A.b.b.a.a.a ##23 ENSGT01100000263477.A.b.b.a.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483.b #24 ENSGT00940000161483.a #24 ENSGT01020000230389.b.a.a.a.a ENSGT00910000144330 ENSGT00940000161540 ENSGT00530000063085.A.a ENSGT01050000244883.A.a.a.a.b ENSGT00940000162509.bb.a.b ENSGT00940000154270 ENSGT00940000162509.bb.a.a.a ENSGT00940000164371 Opossum MODERN SPECIES 7 ENSMODG00000013696 RAB19 (ENSMODG00000013653) ENSMODG00000013686 DENND2A (ENSMODG00000013670) ADCK2 (ENSMODG00000013645) BRAF (ENSMODG00000013637) ENSMODG00000041532 ENSMODG00000040286 ENSMODG00000013621 ENSMODG00000029640 ENSMODG00000027559 ENSMODG00000037920 AGK (ENSMODG00000013616) #19 DENND11 (ENSMODG00000013610) #20 ENSMODG00000013606 #21 SSBP1 (ENSMODG00000038788) #22 T2R3J (ENSMODG00000043417) ##23 T2R3A (ENSMODG00000013594) ##23 ENSMODG00000046353 ##23 T2R3H (ENSMODG00000047607) ##23 T2R3F (ENSMODG00000043794) ##23 ENSMODG00000051236 #23 ENSMODG00000000003 #24 ENSMODG00000036760 #24 ENSMODG00000024419 #24 ENSMODG00000000013 MGAM (ENSMODG00000000054) ENSMODG00000024400 ENSMODG00000000617 ENSMODG00000000630 ENSMODG00000000671 Marsupialia_b ANCESTRAL SPECIES 10 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b.b.a ##23 ENSGT01100000263477.A.b.b.b.b ##23 ENSGT01100000263477.A.b.b.a.a.a ##23 ENSGT01100000263477.A.b.b.a.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483.b #24 ENSGT00940000161483.a #24 ENSGT00910000144330 ENSGT01100000263477.A.a.a ##23 ENSGT00940000161540 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b ENSGT00940000162509.bb.a.b ENSGT00940000154270 Tasmanian devil MODERN SPECIES 4 HIPK2 (ENSSHAG00000011202) TBXAS1 (ENSSHAG00000013042) PARP12 (ENSSHAG00000014045) KDM7A (ENSSHAG00000014241) ENSSHAG00000014941 RAB19 (ENSSHAG00000015109) ENSSHAG00000015298 DENND2A (ENSSHAG00000015503) ADCK2 (ENSSHAG00000015880) BRAF (ENSSHAG00000016011) MRPS33 (ENSSHAG00000020653) TMEM178B (ENSSHAG00000023304) AGK (ENSSHAG00000017516) #19 DENND11 (ENSSHAG00000025914) #20 WEE2 (ENSSHAG00000001703) #21 SSBP1 (ENSSHAG00000001629) #22 ENSSHAG00000024683 ##23 ENSSHAG00000028031 ##23 ENSSHAG00000004218 #23 ENSSHAG00000022993 ##23 ENSSHAG00000004582 #24 ENSSHAG00000004852 #24 ENSSHAG00000028830 ENSSHAG00000022109 ENSSHAG00000005959 ##23 MGAM (ENSSHAG00000006693) ENSSHAG00000001480 ENSSHAG00000004006 ENSSHAG00000004705 ENSSHAG00000004936 ENSSHAG00000031136 Diprotodontia ANCESTRAL SPECIES 28 ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b.b.a ##23 ENSGT01100000263477.A.b.b.b.b ##23 ENSGT01100000263477.A.b.b.a.a.a ##23 ENSGT01100000263477.A.b.b.a.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483.b #24 ENSGT00940000161483.a #24 ENSGT00910000144330 ENSGT00940000161540 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b ENSGT00940000155819.a.a ENSGT00940000164102.g ENSGT00940000164371 Diprotodontia_a ANCESTRAL SPECIES 27 ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a.b ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b.b.a ##23 ENSGT01100000263477.A.b.b.b.b ##23 ENSGT01100000263477.A.b.b.a.a.a ##23 ENSGT01100000263477.A.b.b.a.b ##23 ENSGT01100000263477.C #23 ENSGT00940000161483.b #24 ENSGT00940000161483.a #24 ENSGT00940000155819.a.a ENSGT01050000244883.A.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT00910000144330 ENSGT00940000161540 ENSGT00530000063085.A.a ENSGT00940000164102.g ENSGT00940000164371 Common wonbat MODERN SPECIES 1093 HIPK2 (ENSVURG00010014172) TBXAS1 (ENSVURG00010014194) PARP12 (ENSVURG00010014215) KDM7A (ENSVURG00010014231) SLC37A3 (ENSVURG00010014268) RAB19 (ENSVURG00010014282) ENSVURG00010014287 DENND2A (ENSVURG00010014300) ADCK2 (ENSVURG00010014316) NDUFB2 (ENSVURG00010014321) BRAF (ENSVURG00010014328) MRPS33 (ENSVURG00010014348) ENSVURG00010014356 AGK (ENSVURG00010014366) #19 DENND11 (ENSVURG00010014403) #20 SSBP1 (ENSVURG00010014427) #22 ENSVURG00010014431 ##23 ENSVURG00010014435 ##23 ENSVURG00010014448 ##23 ENSVURG00010014454 ##23 ENSVURG00010014459 #23 ENSVURG00010014463 #24 ENSVURG00010014479 #24 ENSVURG00010014495 ENSVURG00010014506 ENSVURG00010014568 koala MODERN SPECIES 70 TBXAS1 (ENSPCIG00000036732) PARP12 (ENSPCIG00000016386) KDM7A (ENSPCIG00000016381) SLC37A3 (ENSPCIG00000016378) RAB19 (ENSPCIG00000036522) ENSPCIG00000016373 DENND2A (ENSPCIG00000016371) ADCK2 (ENSPCIG00000016367) NDUFB2 (ENSPCIG00000016365) BRAF (ENSPCIG00000016351) MRPS33 (ENSPCIG00000016348) ENSPCIG00000016346 ENSPCIG00000016343 AGK (ENSPCIG00000016339) #19 DENND11 (ENSPCIG00000016337) #20 SSBP1 (ENSPCIG00000036171) #22 ENSPCIG00000032279 ##23 ENSPCIG00000034782 ##23 ENSPCIG00000005366 ##23 ENSPCIG00000023331 #23 ENSPCIG00000023651 #24 ENSPCIG00000023648 #24 ENSPCIG00000023643 ENSPCIG00000023626 MGAM (ENSPCIG00000023404) ENSPCIG00000009496 ENSPCIG00000034141 ENSPCIG00000022716 ENSPCIG00000034738 ENSPCIG00000004703 ENSPCIG00000035459 Platypus MODERN SPECIES 1 MYBPC2 (ENSOANG00000003920) ENSOANG00000003921 SHANK1 (ENSOANG00000045476) SYT3 (ENSOANG00000045233) LRRC4B (ENSOANG00000041413) ASPDH (ENSOANG00000048746) JOSD2 (ENSOANG00000046169) ADCK2 (ENSOANG00000049900) ENSOANG00000042309 BRAF (ENSOANG00000013389) ENSOANG00000013387 TMEM178B (ENSOANG00000046717) AGK (ENSOANG00000001364) #19 DENND11 (ENSOANG00000001367) #20 ENSOANG00000009220 #21 SSBP1 (ENSOANG00000046030) #22 CREB3L2 (ENSOANG00000049411) DGKI (ENSOANG00000005017) PTN (ENSOANG00000005016) CHRM2 (ENSOANG00000005015) ENSOANG00000005013 ENSOANG00000045604 FAM180A (ENSOANG00000040937) SLC13A4 (ENSOANG00000005009) NUP205 (ENSOANG00000005007) CNOT4 (ENSOANG00000005006) ENSOANG00000049125 ENSOANG00000049552 WDR91 (ENSOANG00000005003) ENSOANG00000047333 ENSOANG00000005002 Sauria ANCESTRAL SPECIES 4 ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00940000177916 ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00950000185349 ENSGT00940000154471.a.b.a.b Archelosauria ANCESTRAL SPECIES 3 ENSGT00940000165307.c ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00950000185349 ENSGT00940000154471.a.b.a.b Archosauria ANCESTRAL SPECIES 4 ENSGT00940000165307.d ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00940000154471.a.b.a.b ENSGT00390000018491 Aves ANCESTRAL SPECIES 1 ENSGT00940000165307.d ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00940000154471.a.b.a.b ENSGT00390000018491 Neognathae ANCESTRAL SPECIES 3 ENSGT00940000165307.d ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00940000154471.a.b.a.b ENSGT00390000018491 Galloanserae ANCESTRAL SPECIES 3 ENSGT00940000165307.d ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT01080000257332.A.b.b ENSGT00940000154136.k.b.b.b ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 Phasianidae ANCESTRAL SPECIES ENSGT00940000165307.d ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961.k #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765.f ENSGT00940000154471.a.b.a.b ENSGT00390000018491 Phasianidae_b ANCESTRAL SPECIES ENSGT00940000165307.d ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961.k #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765.f ENSGT00940000154471.a.b.a.b ENSGT00390000018491 Turkey MODERN SPECIES ENSMGAG00000012823 ENSMGAG00000019062 ASCL4 (ENSMGAG00000012814) ENSMGAG00000017736 ENSMGAG00000012805 ENSMGAG00000021425 ENSMGAG00000012777 ENSMGAG00000012781 ENSMGAG00000022100 TIMP3 (ENSMGAG00000012775) ENSMGAG00000012768 ENSMGAG00000019460 ENSMGAG00000017620 ENSMGAG00000013250 ENSMGAG00000022233 ENSMGAG00000013259 #22 ENSMGAG00000013242 #21 ENSMGAG00000013239 #20 ENSMGAG00000021045 #19 ENSMGAG00000013234 #19 ENSMGAG00000013232 MRPS33 (ENSMGAG00000013231) ENSMGAG00000013219 ENSMGAG00000018064 ENSMGAG00000018632 ENSMGAG00000021239 ADCK2 (ENSMGAG00000013216) ENSMGAG00000013210 ENSMGAG00000019620 ENSMGAG00000021516 ENSMGAG00000013205 Chicken MODERN SPECIES SLC37A3 (ENSGALG00010013328) RAB19 (ENSGALG00010013337) MKRN4P (ENSGALG00010013348) ENSGALG00010013362 DENND2A (ENSGALG00010013381) ADCK2 (ENSGALG00010013393) ENSGALG00010013404 NDUFB2 (ENSGALG00010013416) BRAF (ENSGALG00010013466) MRPS33 (ENSGALG00010013510) ENSGALG00010013519 TMEM178B (ENSGALG00010013523) AGK (ENSGALG00010013561) #19 DENND11 (ENSGALG00010013572) #20 WEE2 (ENSGALG00010013595) #21 SSBP1 (ENSGALG00010013625) #22 CREB3L2 (ENSGALG00010013690) DGKI (ENSGALG00010013757) PTN (ENSGALG00010013828) CHRM2 (ENSGALG00010013994) MTPN (ENSGALG00010010690) FAM180A (ENSGALG00010011034) SLC13A4 (ENSGALG00010011042) C7orf73 (ENSGALG00010010106) SYT10 (ENSGALG00010011050) PKP2 (ENSGALG00010011076) YARS2 (ENSGALG00010011091) DNM1L (ENSGALG00010011130) FGD4 (ENSGALG00010011150) BICD1 (ENSGALG00010015918) ENSGALG00010011163 Japanese quail MODERN SPECIES ENSCJPG00005020289 KDM7A (ENSCJPG00005020287) ENSCJPG00005020286 RAB19 (ENSCJPG00005020285) ENSCJPG00005020284 DENND2A (ENSCJPG00005020283) ADCK2 (ENSCJPG00005020282) ENSCJPG00005020281 NDUFB2 (ENSCJPG00005020280) BRAF (ENSCJPG00005020278) MRPS33 (ENSCJPG00005020274) TMEM178B (ENSCJPG00005020271) AGK (ENSCJPG00005020266) #19 DENND11 (ENSCJPG00005020264) #20 WEE2 (ENSCJPG00005020263) #21 SSBP1 (ENSCJPG00005020262) #22 CREB3L2 (ENSCJPG00005020261) DGKI (ENSCJPG00005020258) PTN (ENSCJPG00005020254) CHRM2 (ENSCJPG00005020252) MTPN (ENSCJPG00005020249) FAM180A (ENSCJPG00005020248) SLC13A4 (ENSCJPG00005020247) STMP1 (ENSCJPG00005020246) SYT10 (ENSCJPG00005020241) PKP2 (ENSCJPG00005020239) YARS2 (ENSCJPG00005020238) DNM1L (ENSCJPG00005020236) FGD4 (ENSCJPG00005020235) BICD1 (ENSCJPG00005020234) ENSCJPG00005020232 Anatidae ANCESTRAL SPECIES 8 ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000012348 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00940000154136.k.b.b.b.a.b.b.a ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00940000154471.a.b.a.b Pink-footed goose MODERN SPECIES 24 ENSABRG00000005418 KDM7A (ENSABRG00000005332) SLC37A3 (ENSABRG00000005274) RAB19 (ENSABRG00000005252) ENSABRG00000005237 DENND2A (ENSABRG00000004815) ADCK2 (ENSABRG00000004766) NDUFB2 (ENSABRG00000004762) BRAF (ENSABRG00000003775) MRPS33 (ENSABRG00000003738) ENSABRG00000003734 TMEM178B (ENSABRG00000003726) AGK (ENSABRG00000003698) #19 DENND11 (ENSABRG00000003684) #20 WEE2 (ENSABRG00000003623) #21 SSBP1 (ENSABRG00000003596) #22 CREB3L2 (ENSABRG00000003557) DGKI (ENSABRG00000000869) PTN (ENSABRG00000017354) CHRM2 (ENSABRG00000017352) ENSABRG00000017342 MTPN (ENSABRG00000017334) FAM180A (ENSABRG00000017321) SLC13A4 (ENSABRG00000017317) STMP1 (ENSABRG00000017313) ENSABRG00000017304 ENSABRG00000017297 PKP2 (ENSABRG00000017294) YARS2 (ENSABRG00000017293) DNM1L (ENSABRG00000017282) FGD4 (ENSABRG00000017257) Duck MODERN SPECIES SLC37A3 (ENSAPLG00000016319) RAB19 (ENSAPLG00000016306) ENSAPLG00000016256 ENSAPLG00000016136 DENND2A (ENSAPLG00000015883) ADCK2 (ENSAPLG00000015876) ENSAPLG00000016818 NDUFB2 (ENSAPLG00000017148) BRAF (ENSAPLG00000015187) MRPS33 (ENSAPLG00000018693) TMEM178B (ENSAPLG00000023717) ENSAPLG00000024945 AGK (ENSAPLG00000014517) #19 DENND11 (ENSAPLG00000014033) #20 WEE2 (ENSAPLG00000013332) #21 SSBP1 (ENSAPLG00000013244) #22 CREB3L2 (ENSAPLG00000012813) ENSAPLG00000012073 ENSAPLG00000019993 PTN (ENSAPLG00000011788) CHRM2 (ENSAPLG00000021598) MTPN (ENSAPLG00000031045) FAM180A (ENSAPLG00000003787) SLC13A4 (ENSAPLG00000003795) ENSAPLG00000018318 SYT10 (ENSAPLG00000004558) PKP2 (ENSAPLG00000004755) YARS2 (ENSAPLG00000004982) DNM1L (ENSAPLG00000005012) ENSAPLG00000020687 FGD4 (ENSAPLG00000011676) Neognathae_b ANCESTRAL SPECIES 2 ENSGT00940000165307.d ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00940000154471.a.b.a.b ENSGT00390000018491 ENSGT00730000111305 Passeriformes ANCESTRAL SPECIES 3 ENSGT00940000165307.d ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00940000158899 ENSGT01100000264041.a ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00940000154471.a.b.a.b ENSGT00390000018491 Great tit MODERN SPECIES 10 ITPR2 (ENSPMJG00000009161) INTS13 (ENSPMJG00000009129) FGFR1OP2 (ENSPMJG00000009128) TM7SF3 (ENSPMJG00000009126) MED21 (ENSPMJG00000009125) STK38L (ENSPMJG00000009106) BMAL2 (ENSPMJG00000009089) REP15 (ENSPMJG00000009088) PPFIBP1 (ENSPMJG00000009077) CYB5R3 (ENSPMJG00000009034) ENSPMJG00000009033 ENSPMJG00000009032 AGK (ENSPMJG00000009029) #19 DENND11 (ENSPMJG00000009027) #20 WEE2 (ENSPMJG00000009025) #21 SSBP1 (ENSPMJG00000009024) #22 CREB3L2 (ENSPMJG00000009020) DGKI (ENSPMJG00000009012) PTN (ENSPMJG00000009011) CHRM2 (ENSPMJG00000009002) MTPN (ENSPMJG00000008993) FAM180A (ENSPMJG00000008985) SLC13A4 (ENSPMJG00000008983) SYT10 (ENSPMJG00000008976) ENSPMJG00000008975 PKP2 (ENSPMJG00000008974) YARS2 (ENSPMJG00000008973) DNM1L (ENSPMJG00000008972) FGD4 (ENSPMJG00000008966) BICD1 (ENSPMJG00000008964) ENSPMJG00000008959 Passeriformes_d ANCESTRAL SPECIES 3 ENSGT00940000165307.d ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00940000158899 ENSGT01100000264041.a ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00940000154471.a.b.a.b ENSGT00390000018491 Flycatcher DUPLICATION Flycatcher MODERN SPECIES 10 B4GALNT3 (ENSFALG00000003918) CCDC77 (ENSFALG00000003914) KDM5A (ENSFALG00000003907) SLC6A13 (ENSFALG00000003900) ENSFALG00000003846 IQSEC3 (ENSFALG00000003830) ENSFALG00000003803 ENSFALG00000003818 ENSFALG00000027563 ENSFALG00000003800 MRPS33 (ENSFALG00000028609) TMEM178B (ENSFALG00000003797) AGK (ENSFALG00000003794) #19 DENND11 (ENSFALG00000003784) #20 WEE2 (ENSFALG00000003781) #21 ENSFALG00000003767 #22 BRAF (ENSFALG00000003761) NDUFB2 (ENSFALG00000003758) ENSFALG00000003752 ADCK2 (ENSFALG00000003739) DENND2A (ENSFALG00000003734) ENSFALG00000003727 ENSFALG00000003717 RAB19 (ENSFALG00000003709) SLC37A3 (ENSFALG00000003695) KDM7A (ENSFALG00000003684) ENSFALG00000003681 ENSFALG00000003671 ENSFALG00000003668 ENSFALG00000025384 DYRK4 (ENSFALG00000001938) Flycatcher MODERN SPECIES 10 PHF21B (ENSFALG00000002785) NUP50 (ENSFALG00000025491) KIAA0930 (ENSFALG00000002797) FAM118A (ENSFALG00000025745) SMC1B (ENSFALG00000002808) RIBC2 (ENSFALG00000002815) FBLN1 (ENSFALG00000002830) ATXN10 (ENSFALG00000002840) WNT7B (ENSFALG00000002848) ENSFALG00000025249 PPARA (ENSFALG00000002852) ENSFALG00000015127 TTC38 (ENSFALG00000002854) ENSFALG00000008102 ENSFALG00000022674 ENSFALG00000000509 #22 CREB3L2 (ENSFALG00000000511) ENSFALG00000027579 ENSFALG00000000515 ENSFALG00000024058 PTN (ENSFALG00000000528) CHRM2 (ENSFALG00000000530) ENSFALG00000023174 MTPN (ENSFALG00000027900) FAM180A (ENSFALG00000026214) SLC13A4 (ENSFALG00000000544) ENSFALG00000025701 FGD4 (ENSFALG00000009018) ENSFALG00000009020 ENSFALG00000009023 ENSFALG00000023662 Passeriformes_g ANCESTRAL SPECIES 4 ENSGT00940000165307.d ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00940000158899 ENSGT01100000264041.a ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00940000154471.a.b.a.b ENSGT00390000018491 Medium ground finch MODERN SPECIES 117 KDM7A (ENSGFOG00000002467) SLC37A3 (ENSGFOG00000002141) RAB19 (ENSGFOG00000002113) ENSGFOG00000002093 ENSGFOG00000002049 DENND2A (ENSGFOG00000002024) ADCK2 (ENSGFOG00000002010) ENSGFOG00000002004 ENSGFOG00000001987 ENSGFOG00000001977 MRPS33 (ENSGFOG00000014792) TMEM178B (ENSGFOG00000014791) AGK (ENSGFOG00000014789) #19 DENND11 (ENSGFOG00000014788) #20 WEE2 (ENSGFOG00000014787) #21 SSBP1 (ENSGFOG00000014786) #22 CREB3L2 (ENSGFOG00000014784) DGKI (ENSGFOG00000014778) Passeroidea ANCESTRAL SPECIES 3 ENSGT00940000165307.d ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00940000158899 ENSGT01100000264041.a ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00940000154471.a.b.a.b ENSGT00390000018491 Common canary MODERN SPECIES 26 ENSSCAG00000009680 KDM7A (ENSSCAG00000009690) SLC37A3 (ENSSCAG00000009707) RAB19 (ENSSCAG00000009751) ENSSCAG00000009754 ENSSCAG00000009762 DENND2A (ENSSCAG00000009777) ADCK2 (ENSSCAG00000009793) NDUFB2 (ENSSCAG00000009816) BRAF (ENSSCAG00000009820) MRPS33 (ENSSCAG00000009824) TMEM178B (ENSSCAG00000009826) AGK (ENSSCAG00000009830) #19 DENND11 (ENSSCAG00000009835) #20 WEE2 (ENSSCAG00000009838) #21 SSBP1 (ENSSCAG00000009843) #22 ENSSCAG00000009847 CREB3L2 (ENSSCAG00000009853) ENSSCAG00000009868 ENSSCAG00000009914 PTN (ENSSCAG00000009918) CHRM2 (ENSSCAG00000009921) MTPN (ENSSCAG00000009925) FAM180A (ENSSCAG00000009930) SLC13A4 (ENSSCAG00000009933) SYT10 (ENSSCAG00000009941) ENSSCAG00000009946 PKP2 (ENSSCAG00000009951) YARS2 (ENSSCAG00000009963) DNM1L (ENSSCAG00000009981) FGD4 (ENSSCAG00000010013) Neognathae_c ANCESTRAL SPECIES ENSGT00940000165307.d ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT01050000245630 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00940000154471.a.b.a.b ENSGT00390000018491 ENSGT00730000111305 Kakapo MODERN SPECIES 20 ENSSHBG00005013071 KDM7A (ENSSHBG00005013004) ENSSHBG00005012952 RAB19 (ENSSHBG00005012935) ENSSHBG00005012917 DENND2A (ENSSHBG00005012896) ADCK2 (ENSSHBG00005012850) ENSSHBG00005012823 NDUFB2 (ENSSHBG00005012798) BRAF (ENSSHBG00005012383) MRPS33 (ENSSHBG00005012281) TMEM178B (ENSSHBG00005012267) AGK (ENSSHBG00005012231) #19 DENND11 (ENSSHBG00005012213) #20 WEE2 (ENSSHBG00005012149) #21 SSBP1 (ENSSHBG00005011885) #22 CREB3L2 (ENSSHBG00005011766) DGKI (ENSSHBG00005010562) PTN (ENSSHBG00005010383) CHRM2 (ENSSHBG00005010341) MTPN (ENSSHBG00005010313) FAM180A (ENSSHBG00005010288) SLC13A4 (ENSSHBG00005010265) SYT10 (ENSSHBG00005010225) PKP2 (ENSSHBG00005010174) YARS2 (ENSSHBG00005010145) DNM1L (ENSSHBG00005010091) FGD4 (ENSSHBG00005009953) BICD1 (ENSSHBG00005009913) ENSSHBG00005009885 AMN1 (ENSSHBG00005009870) African ostrich MODERN SPECIES 771 TRIM24 (ENSSCUG00000017713) AKR1D1 (ENSSCUG00000017707) ENSSCUG00000017705 KDM7A (ENSSCUG00000017704) SLC37A3 (ENSSCUG00000017702) RAB19 (ENSSCUG00000017701) ENSSCUG00000017699 ENSSCUG00000017694 DENND2A (ENSSCUG00000017693) ENSSCUG00000017692 BRAF (ENSSCUG00000017689) MRPS33 (ENSSCUG00000017685) AGK (ENSSCUG00000017683) #19 DENND11 (ENSSCUG00000017682) #20 WEE2 (ENSSCUG00000017681) #21 SSBP1 (ENSSCUG00000017678) #22 CREB3L2 (ENSSCUG00000017675) DGKI (ENSSCUG00000017670) PTN (ENSSCUG00000017667) CHRM2 (ENSSCUG00000017664) MTPN (ENSSCUG00000017659) FAM180A (ENSSCUG00000017657) SLC13A4 (ENSSCUG00000017655) SYT10 (ENSSCUG00000017653) PKP2 (ENSSCUG00000017652) ENSSCUG00000017650 DNM1L (ENSSCUG00000017647) FGD4 (ENSSCUG00000017645) BICD1 (ENSSCUG00000017643) ENSSCUG00000017642 AMN1 (ENSSCUG00000017640) Australian saltwater crocodile MODERN SPECIES 49 ENSCPRG00005018007 KDM7A (ENSCPRG00005017999) ENSCPRG00005017995 RAB19 (ENSCPRG00005017994) ENSCPRG00005017990 DENND2A (ENSCPRG00005017981) ADCK2 (ENSCPRG00005017976) ENSCPRG00005017974 NDUFB2 (ENSCPRG00005017962) BRAF (ENSCPRG00005017954) MRPS33 (ENSCPRG00005017949) TMEM178B (ENSCPRG00005017944) AGK (ENSCPRG00005017939) #19 DENND11 (ENSCPRG00005017935) #20 WEE2 (ENSCPRG00005017929) #21 SSBP1 (ENSCPRG00005017927) #22 CREB3L2 (ENSCPRG00005017921) DGKI (ENSCPRG00005017914) PTN (ENSCPRG00005017909) CHRM2 (ENSCPRG00005017908) MTPN (ENSCPRG00005017899) FAM180A (ENSCPRG00005017893) SLC13A4 (ENSCPRG00005017885) SYT10 (ENSCPRG00005017878) ENSCPRG00005017874 ENSCPRG00005017869 PKP2 (ENSCPRG00005017861) ENSCPRG00005017850 YARS2 (ENSCPRG00005017845) DNM1L (ENSCPRG00005017783) FGD4 (ENSCPRG00005017740) Cryptodira ANCESTRAL SPECIES 10 ENSGT00940000165307.c ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00950000185349 ENSGT00940000154471.a.b.a.b Chinese turtle MODERN SPECIES 1880 ENSPSIG00000010662 KDM7A (ENSPSIG00000010327) SLC37A3 (ENSPSIG00000009128) RAB19 (ENSPSIG00000009123) ENSPSIG00000008369 ENSPSIG00000008349 DENND2A (ENSPSIG00000007670) ADCK2 (ENSPSIG00000007607) BRAF (ENSPSIG00000011427) ENSPSIG00000001875 MRPS33 (ENSPSIG00000011413) TMEM178B (ENSPSIG00000011409) ENSPSIG00000011391 AGK (ENSPSIG00000008673) #19 DENND11 (ENSPSIG00000008006) #20 SSBP1 (ENSPSIG00000007756) #22 CREB3L2 (ENSPSIG00000006461) DGKI (ENSPSIG00000005205) PTN (ENSPSIG00000005039) CHRM2 (ENSPSIG00000004996) ENSPSIG00000001873 Testudinoidea ANCESTRAL SPECIES 4 ENSGT00940000165307.c ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.k ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00950000185349 ENSGT00940000154471.a.b.a.b Testudinidae ANCESTRAL SPECIES 14 ENSGT00940000165307.d ENSGT00940000165307.c ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.k ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00950000185349 ENSGT00940000154471.a.b.a.b Abingdon island giant tortoise MODERN SPECIES 929 KDM7A (ENSCABG00000022196) ENSCABG00000022197 ENSCABG00000022198 RAB19 (ENSCABG00000022199) ENSCABG00000022213 DENND2A (ENSCABG00000022217) ADCK2 (ENSCABG00000022219) ENSCABG00000022221 BRAF (ENSCABG00000022223) MRPS33 (ENSCABG00000022225) TMEM178B (ENSCABG00000022226) ENSCABG00000022230 AGK (ENSCABG00000022232) #19 DENND11 (ENSCABG00000000072) #20 WEE2 (ENSCABG00000000152) #21 SSBP1 (ENSCABG00000000210) #22 ENSCABG00000000243 DGKI (ENSCABG00000000404) ENSCABG00000000868 PTN (ENSCABG00000000869) CHRM2 (ENSCABG00000000873) Goode s thornscrub tortoise MODERN SPECIES KDM7A (ENSGEVG00005009590) ENSGEVG00005009537 RAB19 (ENSGEVG00005009493) ENSGEVG00005009419 DENND2A (ENSGEVG00005009172) ADCK2 (ENSGEVG00005009085) ENSGEVG00005009033 NDUFB2 (ENSGEVG00005008991) BRAF (ENSGEVG00005008906) MRPS33 (ENSGEVG00005008859) TMEM178B (ENSGEVG00005008814) ENSGEVG00005008785 AGK (ENSGEVG00005008746) #19 DENND11 (ENSGEVG00005008685) #20 WEE2 (ENSGEVG00005020080) #21 SSBP1 (ENSGEVG00005020064) #22 ENSGEVG00005020046 ENSGEVG00005020039 DGKI (ENSGEVG00005019959) PTN (ENSGEVG00005019932) CHRM2 (ENSGEVG00005019927) MTPN (ENSGEVG00005019924) FAM180A (ENSGEVG00005019917) SLC13A4 (ENSGEVG00005019909) STMP1 (ENSGEVG00005019901) SYT10 (ENSGEVG00005019891) PKP2 (ENSGEVG00005019875) YARS2 (ENSGEVG00005019867) DNM1L (ENSGEVG00005019845) ENSGEVG00005019832 ENSGEVG00005019827 Emydidae ANCESTRAL SPECIES 5 ENSGT00940000165307.c ENSGT00940000158039 ENSGT00940000163139 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044.k ENSGT00940000156154 ENSGT00390000011401.a ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00950000185349 ENSGT00940000154471.a.b.a.b ENSGT00390000018491 Three-toed box turtle MODERN SPECIES 118 ENSTMTG00000020978 ENSTMTG00000021003 KDM7A (ENSTMTG00000021038) ENSTMTG00000021046 RAB19 (ENSTMTG00000021071) ENSTMTG00000021160 DENND2A (ENSTMTG00000021170) ADCK2 (ENSTMTG00000021204) ENSTMTG00000021230 BRAF (ENSTMTG00000021261) MRPS33 (ENSTMTG00000021462) TMEM178B (ENSTMTG00000021466) AGK (ENSTMTG00000021483) #19 DENND11 (ENSTMTG00000021527) #20 WEE2 (ENSTMTG00000021535) #21 SSBP1 (ENSTMTG00000021544) #22 CREB3L2 (ENSTMTG00000021553) DGKI (ENSTMTG00000021578) PTN (ENSTMTG00000021755) CHRM2 (ENSTMTG00000021762) MTPN (ENSTMTG00000021764) FAM180A (ENSTMTG00000021768) SLC13A4 (ENSTMTG00000003255) SYT10 (ENSTMTG00000003286) PKP2 (ENSTMTG00000003317) ENSTMTG00000003339 YARS2 (ENSTMTG00000003380) DNM1L (ENSTMTG00000003416) FGD4 (ENSTMTG00000003532) ENSTMTG00000003899 BICD1 (ENSTMTG00000003918) painted turtle MODERN SPECIES 759 ENSCPBG00000011919 RAB19 (ENSCPBG00000011914) ENSCPBG00000011911 ENSCPBG00000011907 DENND2A (ENSCPBG00000011891) ADCK2 (ENSCPBG00000011871) ENSCPBG00000011850 ENSCPBG00000011814 ENSCPBG00000011806 BRAF (ENSCPBG00000011794) ENSCPBG00000011784 TMEM178B (ENSCPBG00000011771) AGK (ENSCPBG00000011764) #19 DENND11 (ENSCPBG00000011756) #20 WEE2 (ENSCPBG00000011436) #21 SSBP1 (ENSCPBG00000011435) #22 CREB3L2 (ENSCPBG00000011432) DGKI (ENSCPBG00000011429) PTN (ENSCPBG00000011427) CHRM2 (ENSCPBG00000011425) MTPN (ENSCPBG00000011423) FAM180A (ENSCPBG00000011422) SLC13A4 (ENSCPBG00000011420) Lepidosauria ANCESTRAL SPECIES 3 ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00940000177916 ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000155765 ENSGT00950000185349 ENSGT00940000154471.a.b.a.b tuatara MODERN SPECIES 11 ENSSPUG00000003952 ENSSPUG00000003965 ENSSPUG00000003977 ENSSPUG00000003997 RAB19 (ENSSPUG00000004019) ENSSPUG00000004045 ENSSPUG00000004065 DENND2A (ENSSPUG00000004116) NDUFB2 (ENSSPUG00000004211) BRAF (ENSSPUG00000004226) MRPS33 (ENSSPUG00000004275) TMEM178B (ENSSPUG00000004311) AGK (ENSSPUG00000004322) #19 DENND11 (ENSSPUG00000004337) #20 WEE2 (ENSSPUG00000004377) #21 SSBP1 (ENSSPUG00000004501) #22 CREB3L2 (ENSSPUG00000004512) DGKI (ENSSPUG00000004569) PTN (ENSSPUG00000004749) ENSSPUG00000004763 ENSSPUG00000004772 Episquamata ANCESTRAL SPECIES 3 ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00940000177916 ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00940000154136 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000153173.b.b ENSGT00940000155765 Toxicofera ANCESTRAL SPECIES 7 ENSGT00940000158039 ENSGT00940000163296 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00390000007427 ENSGT00950000182931.B.a.a ENSGT00940000177916 ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000153173.b.b ENSGT00940000155765 ENSGT00950000185349 Elapidae ANCESTRAL SPECIES 6 ENSGT00940000165307.c ENSGT00940000158039.c ENSGT00940000165554 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00950000182931.B.a.a ENSGT00940000177916 ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000153173.b.b ENSGT00940000155765 ENSGT00950000185349 Elapidae_a ANCESTRAL SPECIES 1 ENSGT00940000165307.c ENSGT00940000158039.c ENSGT00940000165554 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00950000182931.B.a.a ENSGT00940000177916 ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000153173.b.b ENSGT00940000155765 ENSGT00950000185349 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000165307.c ENSGT00940000158039.c ENSGT00940000165554 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00950000182931.B.a.a ENSGT00940000177916 ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00550000076278 ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000153173.b.b ENSGT00940000155765 ENSGT00950000185349 Mainland tiger snake MODERN SPECIES 6 ENSNSUG00000013601 KDM7A (ENSNSUG00000013609) RAB19 (ENSNSUG00000013618) ENSNSUG00000013670 DENND2A (ENSNSUG00000013674) ENSNSUG00000013676 ADCK2 (ENSNSUG00000013679) NDUFB2 (ENSNSUG00000013683) BRAF (ENSNSUG00000013684) MRPS33 (ENSNSUG00000013689) TMEM178B (ENSNSUG00000013690) ENSNSUG00000013692 AGK (ENSNSUG00000013693) #19 DENND11 (ENSNSUG00000013695) #20 WEE2 (ENSNSUG00000013696) #21 SSBP1 (ENSNSUG00000013697) #22 CREB3L2 (ENSNSUG00000013698) DGKI (ENSNSUG00000013708) PTN (ENSNSUG00000013712) CHRM2 (ENSNSUG00000013715) MTPN (ENSNSUG00000013717) FAM180A (ENSNSUG00000013718) SLC13A4 (ENSNSUG00000013719) ENSNSUG00000013720 SYT10 (ENSNSUG00000013721) PKP2 (ENSNSUG00000013723) YARS2 (ENSNSUG00000013730) DNM1L (ENSNSUG00000013735) DHX58 (ENSNSUG00000013844) ENSNSUG00000013877 ENSNSUG00000013878 Eastern brown snake MODERN SPECIES AKR1D1 (ENSPTXG00000007371) ENSPTXG00000007370 ENSPTXG00000007369 KDM7A (ENSPTXG00000007367) ENSPTXG00000007366 RAB19 (ENSPTXG00000007365) ENSPTXG00000007364 DENND2A (ENSPTXG00000007363) ADCK2 (ENSPTXG00000007362) NDUFB2 (ENSPTXG00000007361) BRAF (ENSPTXG00000007167) TMEM178B (ENSPTXG00000007164) AGK (ENSPTXG00000007163) #19 DENND11 (ENSPTXG00000007161) #20 WEE2 (ENSPTXG00000007160) #21 SSBP1 (ENSPTXG00000007159) #22 CREB3L2 (ENSPTXG00000007157) DGKI (ENSPTXG00000007126) PTN (ENSPTXG00000007119) CHRM2 (ENSPTXG00000007117) MTPN (ENSPTXG00000007115) FAM180A (ENSPTXG00000007112) SLC13A4 (ENSPTXG00000007111) STMP1 (ENSPTXG00000007110) SYT10 (ENSPTXG00000007108) PKP2 (ENSPTXG00000007102) YARS2 (ENSPTXG00000007101) DNM1L (ENSPTXG00000007100) DHX58 (ENSPTXG00000007099) FGD4 (ENSPTXG00000007098) ENSPTXG00000007097 Blue-lipped sea krait MODERN SPECIES 1509 WEE2 (ENSLLTG00000002019) #21 SSBP1 (ENSLLTG00000002011) #22 Indian cobra MODERN SPECIES 6 ENSNNAG00000017152 ENSNNAG00000017156 ENSNNAG00000017165 RAB19 (ENSNNAG00000017175) ENSNNAG00000017195 DENND2A (ENSNNAG00000017215) ADCK2 (ENSNNAG00000017249) NDUFB2 (ENSNNAG00000007603) BRAF (ENSNNAG00000007678) MRPS33 (ENSNNAG00000008535) TMEM178B (ENSNNAG00000008555) ENSNNAG00000008581 AGK (ENSNNAG00000008638) #19 DENND11 (ENSNNAG00000008688) #20 WEE2 (ENSNNAG00000008761) #21 SSBP1 (ENSNNAG00000008797) #22 CREB3L2 (ENSNNAG00000008822) DGKI (ENSNNAG00000009003) PTN (ENSNNAG00000010616) CHRM2 (ENSNNAG00000010624) MTPN (ENSNNAG00000010646) FAM180A (ENSNNAG00000010668) SLC13A4 (ENSNNAG00000010736) STMP1 (ENSNNAG00000011661) SYT10 (ENSNNAG00000011685) PKP2 (ENSNNAG00000011757) YARS2 (ENSNNAG00000011860) DNM1L (ENSNNAG00000011898) DHX58 (ENSNNAG00000012010) ENSNNAG00000012055 ENSNNAG00000012079 Lizard MODERN SPECIES 4 RAB19 (ENSACAG00000040946) ENSACAG00000043454 ENSACAG00000010934 ENSACAG00000029506 DENND2A (ENSACAG00000011024) ADCK2 (ENSACAG00000011163) BRAF (ENSACAG00000011178) ENSACAG00000037471 MRPS33 (ENSACAG00000035383) TMEM178B (ENSACAG00000011370) ENSACAG00000035648 AGK (ENSACAG00000011373) #19 DENND11 (ENSACAG00000011486) #20 ENSACAG00000036864 WEE2 (ENSACAG00000011522) #21 SSBP1 (ENSACAG00000011577) #22 ENSACAG00000035765 ENSACAG00000011643 ENSACAG00000023856 ENSACAG00000016985 ENSACAG00000034835 HIPK2 (ENSACAG00000016940) ENSACAG00000016841 PARP12 (ENSACAG00000016815) SPIC (ENSACAG00000040343) MYBPC1 (ENSACAG00000016657) CHPT1 (ENSACAG00000016640) GNPTAB (ENSACAG00000016592) ENSACAG00000042759 DRAM1 (ENSACAG00000016578) WASHC3 (ENSACAG00000040073) Laterata ANCESTRAL SPECIES 6 ENSGT00940000165307.d ENSGT00940000165307.c ENSGT00940000158039 ENSGT00940000165554 ENSGT00940000156717 ENSGT00950000183077.a.a ENSGT00950000182931.B.a.a ENSGT00390000001536 ENSGT00390000004044 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00940000158899 ENSGT00940000158677 ENSGT00390000013709.b ENSGT00940000155504 ENSGT00940000153173.b.b ENSGT00940000155765 ENSGT00940000154471.a.b.a.b ENSGT00390000018491 Argentine black and white tegu MODERN SPECIES 6 KDM7A (ENSSMRG00000015999) ENSSMRG00000016000 RAB19 (ENSSMRG00000016001) ENSSMRG00000016002 DENND2A (ENSSMRG00000016004) ADCK2 (ENSSMRG00000016005) ENSSMRG00000016006 NDUFB2 (ENSSMRG00000016007) BRAF (ENSSMRG00000016008) MRPS33 (ENSSMRG00000016009) TMEM178B (ENSSMRG00000016011) ENSSMRG00000016013 AGK (ENSSMRG00000016014) #19 DENND11 (ENSSMRG00000016015) #20 WEE2 (ENSSMRG00000016016) #21 SSBP1 (ENSSMRG00000016017) #22 CREB3L2 (ENSSMRG00000016018) DGKI (ENSSMRG00000016019) ENSSMRG00000016152 PTN (ENSSMRG00000016153) CHRM2 (ENSSMRG00000016154) ENSSMRG00000016157 MTPN (ENSSMRG00000016160) ENSSMRG00000016161 FAM180A (ENSSMRG00000016165) ENSSMRG00000016167 SYT10 (ENSSMRG00000016169) PKP2 (ENSSMRG00000016175) YARS2 (ENSSMRG00000016177) DNM1L (ENSSMRG00000016178) DHX58 (ENSSMRG00000016180) Common wall lizard MODERN SPECIES 1 ENSPMRG00000012968 ENSPMRG00000012983 ADCK2 (ENSPMRG00000012996) ENSPMRG00000013000 ENSPMRG00000013004 BRAF (ENSPMRG00000013063) MRPS33 (ENSPMRG00000013489) TMEM178B (ENSPMRG00000013493) ENSPMRG00000013496 ENSPMRG00000013504 AGK (ENSPMRG00000013522) #19 ENSPMRG00000013560 DENND11 (ENSPMRG00000013566) #20 ENSPMRG00000013577 WEE2 (ENSPMRG00000013583) #21 SSBP1 (ENSPMRG00000013598) #22 CREB3L2 (ENSPMRG00000013611) DGKI (ENSPMRG00000013632) PTN (ENSPMRG00000013694) CHRM2 (ENSPMRG00000013704) MTPN (ENSPMRG00000013709) FAM180A (ENSPMRG00000013716) SLC13A4 (ENSPMRG00000013726) SYT10 (ENSPMRG00000013739) ENSPMRG00000013750 ENSPMRG00000013759 ENSPMRG00000013764 ENSPMRG00000013771 PKP2 (ENSPMRG00000013777) YARS2 (ENSPMRG00000013783) DNM1L (ENSPMRG00000013796) Anura ANCESTRAL SPECIES 145 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 #21 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00390000007640.a ENSGT00940000158940 ENSGT00430000031071 ENSGT00940000154479.b ENSGT01030000234550.a.a.d.a.b ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT01010000229625 ENSGT00940000160916 Frog MODERN SPECIES 3 rab19 (ENSXETG00000002673) mkrn1 (ENSXETG00000027117) ENSXETG00000037869 dennd2a (ENSXETG00000049354) adck2 (ENSXETG00000031357) ENSXETG00000005438 ndufb2 (ENSXETG00000002668) ENSXETG00000031320 hars2 (ENSXETG00000002665) braf (ENSXETG00000004845) tmem178b (ENSXETG00000039625) ENSXETG00000037587 agk (ENSXETG00000047267) #19 DENND11 (ENSXETG00000048620) #20 wee2 (ENSXETG00000031988) #21 ssbp1 (ENSXETG00000020197) #22 CREB3L2 (ENSXETG00000033093) dgki (ENSXETG00000021398) ptn (ENSXETG00000032857) chrm2 (ENSXETG00000049444) ENSXETG00000035762 ENSXETG00000045305 mtpn (ENSXETG00000042873) FAM180A (ENSXETG00000010609) slc13a4 (ENSXETG00000010608) nup205 (ENSXETG00000010597) cnot4 (ENSXETG00000010594) ENSXETG00000042282 ENSXETG00000020228 stra8 (ENSXETG00000020235) wdr91 (ENSXETG00000020237) Leishan spiny toad MODERN SPECIES 6 ENSLLEG00000017792 ENSLLEG00000017761 ENSLLEG00000017727 ENSLLEG00000017256 ENSLLEG00000017192 ENSLLEG00000017173 ENSLLEG00000017158 ENSLLEG00000017142 ENSLLEG00000017132 GABRG2 (ENSLLEG00000016578) AGK (ENSLLEG00000016439) #19 ENSLLEG00000016410 ENSLLEG00000016390 ENSLLEG00000016366 DENND11 (ENSLLEG00000016230) #20 SSBP1 (ENSLLEG00000016098) #22 ENSLLEG00000016003 ENSLLEG00000015836 ENSLLEG00000015819 ENSLLEG00000015633 ETV6 (ENSLLEG00000015500) ENSLLEG00000015350 ENSLLEG00000015245 ENSLLEG00000015217 LRP6 (ENSLLEG00000014565) ENSLLEG00000014492 ENSLLEG00000014469 ENSLLEG00000014398 ENSLLEG00000014351 BORCS5 (ENSLLEG00000024978) DUSP16 (ENSLLEG00000024823) Actinopterygii ANCESTRAL SPECIES 685 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 Reedfish MODERN SPECIES ENSECRG00000002091 TACC1 (ENSECRG00000002112) DDHD2 (ENSECRG00000002164) plpp5 (ENSECRG00000002196) NSD3 (ENSECRG00000002214) ENSECRG00000002240 PLEKHA2 (ENSECRG00000002255) ENSECRG00000002267 tm2d2 (ENSECRG00000002274) ENSECRG00000002283 ENSECRG00000002300 unc5da (ENSECRG00000002320) ENSECRG00000002354 TTI2 (ENSECRG00000002371) mak16 (ENSECRG00000002386) ssbp1 (ENSECRG00000002404) #22 creb3l2 (ENSECRG00000002420) cdpf1 (ENSECRG00000002431) ENSECRG00000002504 ENSECRG00000002574 rpl18a (ENSECRG00000002630) ENSECRG00000002670 mta2 (ENSECRG00000002736) cth1 (ENSECRG00000002750) taf6l (ENSECRG00000002757) ENSECRG00000002798 dpp3 (ENSECRG00000002817) ENSECRG00000002843 GAL3ST3 (ENSECRG00000002866) MARK4 (ENSECRG00000002885) ENSECRG00000002916 Neopterygii ANCESTRAL SPECIES 409 ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ENSGT00940000166253 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 Spotted gar MODERN SPECIES 674 gnsa (ENSLOCG00000017070) zgc:194209 (ENSLOCG00000017075) RASSF3 (ENSLOCG00000017077) ENSLOCG00000017078 ENSLOCG00000017079 HDHD5 (ENSLOCG00000017080) ENSLOCG00000017083 ENSLOCG00000017088 ENSLOCG00000017091 prdm4 (ENSLOCG00000017092) ENSLOCG00000017094 AKR1B1 (ENSLOCG00000017095) stmp1 (ENSLOCG00000017103) coa6 (ENSLOCG00000017104) slc13a4 (ENSLOCG00000017106) ssbp1 (ENSLOCG00000017107) #22 ENSLOCG00000017109 ENSLOCG00000017111 ENSLOCG00000017115 ENSLOCG00000017117 ENSLOCG00000017118 ENSLOCG00000017347 ENSLOCG00000017119 ENSLOCG00000017121 ENSLOCG00000017123 ENSLOCG00000017130 ENSLOCG00000017132 ENSLOCG00000017134 ENSLOCG00000017348 ENSLOCG00000017135 ENSLOCG00000017137 Osteoglossocephalai ANCESTRAL SPECIES 63 ENSGT00940000165554 ENSGT00940000159918.a.a ENSGT00940000157633 ENSGT00940000177041 ENSGT00940000162902 ENSGT00940000156443 ENSGT00940000153272.a.b.c ENSGT00940000153272.a.b.d ENSGT00550000076278 ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ENSGT00940000166253 ENSGT00390000018424 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00390000007725.A.a ENSGT00940000179100 ENSGT00940000155840.A ENSGT00940000155810 ENSGT00940000155083.b.a.a ENSGT00940000155083.b.a.b ENSGT00940000156000 ENSGT00940000160124 Osteoglossiformes ANCESTRAL SPECIES 42 ENSGT00390000010251 ENSGT00390000018051 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000165554 ENSGT00940000159918.a.a ENSGT00940000157633 ENSGT00940000177041 ENSGT00940000162902 ENSGT00940000156443 ENSGT00940000153272.a.b.c.b ENSGT00940000153272.a.b.d ENSGT01030000234550.a.a.d.a.b ENSGT00940000166253 ENSGT00390000018424 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00390000007725.A.a.l ENSGT00940000155840.A.gb ENSGT00940000155840.A.fb ENSGT00940000155810 ENSGT00940000155083.b.a.a ENSGT00940000156000 ENSGT00940000160124 ENSGT00950000182999.b.a.a Asian bonytongue MODERN SPECIES 13 cacna1c (ENSSFOG00015023488) ccdc77 (ENSSFOG00015023446) hdhd5 (ENSSFOG00015023428) RAB19 (ENSSFOG00015023417) ENSSFOG00015023397 ENSSFOG00015032524 ENSSFOG00015023371 ENSSFOG00015032298 ASCL4 (ENSSFOG00015023366) prdm4 (ENSSFOG00015023358) akr1b1.2 (ENSSFOG00015027922) akr1b1.1 (ENSSFOG00015023333) slc13a4 (ENSSFOG00015023298) zgc:162331 (ENSSFOG00015023273) ENSSFOG00015023267 ssbp1 (ENSSFOG00015031241) #22 creb3l2 (ENSSFOG00015023256) ENSSFOG00015023245 ENSSFOG00015032574 RASSF3 (ENSSFOG00015023222) zgc:194209 (ENSSFOG00015031947) gnsa (ENSSFOG00015023205) TBC1D30 (ENSSFOG00015023181) ntf3 (ENSSFOG00015028509) ANO2 (ENSSFOG00015023138) vwf (ENSSFOG00015023110) cd9a (ENSSFOG00015023089) cwf19l1 (ENSSFOG00015023080) klhl42 (ENSSFOG00015028538) nrip2 (ENSSFOG00015023069) ENSSFOG00015023053 P. kingsleyae MODERN SPECIES 368 slc26a5 (ENSPKIG00000008700) tspan33a (ENSPKIG00000008773) smo (ENSPKIG00000008815) ube2h (ENSPKIG00000008867) nrf1 (ENSPKIG00000008927) STRIP2 (ENSPKIG00000008977) ahcyl2b (ENSPKIG00000009028) akr1b1.2 (ENSPKIG00000009077) slc13a4 (ENSPKIG00000009128) zgc:162331 (ENSPKIG00000009173) ENSPKIG00000009215 ssbp1 (ENSPKIG00000009266) #22 creb3l2 (ENSPKIG00000009299) ENSPKIG00000009340 ENSPKIG00000009375 ENSPKIG00000009411 RASSF3 (ENSPKIG00000009457) gnsa (ENSPKIG00000009510) TBC1D30 (ENSPKIG00000009589) NTF3 (ENSPKIG00000009677) ENSPKIG00000009690 Clupeocephala ANCESTRAL SPECIES 30 ENSGT00940000153456.b.a ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140 ENSGT01030000234648.a.b.a.a.b.cb.b ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b ENSGT00390000010899.a.b.b.b ENSGT00970000193473 ENSGT00940000159825.b ENSGT00940000155529.B ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ENSGT00940000166253 ENSGT00390000018424 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00390000007725.A.a ENSGT00940000179100 ENSGT00940000155083.b.b ENSGT00940000156000 ENSGT00940000160124 ENSGT00950000182999.b.a.a ENSGT00390000005378 ENSGT00940000175478 Otomorpha ANCESTRAL SPECIES 196 ENSGT00390000008140.l ENSGT01030000234648.a.b.a.a.b.cb.b.a ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b ENSGT00390000010899.a.b.b.b ENSGT01020000230364.a.a.b.a.y.a.b ENSGT00970000193473 ENSGT00940000156567.a.a ENSGT00940000157073.b ENSGT00390000008099 ENSGT00940000155529.B ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ENSGT00940000166253.a ENSGT00390000018424 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00390000007725.A.a ENSGT00940000155840.B ENSGT00940000155083.b.b ENSGT00940000156000 ENSGT00940000160124 ENSGT00950000182999.b.a.a ENSGT00390000005378 Clupeiformes ANCESTRAL SPECIES 32 ENSGT01010000222533 ENSGT00530000064318 ENSGT00940000160124 ENSGT00950000182999.b.a.a ENSGT00390000005378 ENSGT00940000166611 ENSGT00950000182885.B ENSGT00950000182885.C.b ENSGT00390000010777 ENSGT00390000006088 ENSGT00940000159081 ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ENSGT00940000166253.a ENSGT00390000018424 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00390000007725.A.a ENSGT00940000155840.B ENSGT00940000155083.b.b ENSGT00940000156000 ENSGT00390000014084 ENSGT01030000234578.B.a ENSGT00390000006747 ENSGT00950000183117.a.a Denticle herring MODERN SPECIES 6 ENSDCDG00000021697 UPF2 (ENSDCDG00000021705) klhl42 (ENSDCDG00000021728) nrip2 (ENSDCDG00000021735) itfg2 (ENSDCDG00000021745) ascl1a (ENSDCDG00000021754) pah (ENSDCDG00000021796) th2 (ENSDCDG00000022614) nup37 (ENSDCDG00000022874) parpbp (ENSDCDG00000022875) igf1 (ENSDCDG00000022878) coa6 (ENSDCDG00000022880) slc13a4 (ENSDCDG00000022887) zgc:162331 (ENSDCDG00000022894) ENSDCDG00000022895 ssbp1 (ENSDCDG00000022896) #22 creb3l2 (ENSDCDG00000022900) DGKI (ENSDCDG00000023066) ENSDCDG00000027431 RASSF3 (ENSDCDG00000027433) zgc:194209 (ENSDCDG00000027436) gnsa (ENSDCDG00000027447) TBC1D30 (ENSDCDG00000027959) ntf3 (ENSDCDG00000027963) ano2b (ENSDCDG00000027991) cd9b (ENSDCDG00000029064) cwf19l1 (ENSDCDG00000029070) washc3 (ENSDCDG00000029081) dram1 (ENSDCDG00000029082) ENSDCDG00000029084 gnptab (ENSDCDG00000029089) Atlantic herring MODERN SPECIES 7 ENSCHAG00000001449 mybpc1 (ENSCHAG00000001488) chpt1 (ENSCHAG00000001746) gnptab (ENSCHAG00000002251) ascl1a (ENSCHAG00000004363) pah (ENSCHAG00000004474) th2 (ENSCHAG00000007002) nup37 (ENSCHAG00000009289) parpbp (ENSCHAG00000009532) ENSCHAG00000009539 igf1 (ENSCHAG00000009555) coa6 (ENSCHAG00000009656) slc13a4 (ENSCHAG00000009672) zgc:162331 (ENSCHAG00000009948) ENSCHAG00000009993 ssbp1 (ENSCHAG00000010015) #22 creb3l2 (ENSCHAG00000010107) ENSCHAG00000010441 ENSCHAG00000011733 RASSF3 (ENSCHAG00000011742) zgc:194209 (ENSCHAG00000011759) zgc:194209 (ENSCHAG00000011799) gnsa (ENSCHAG00000011850) TBC1D30 (ENSCHAG00000012677) ntf3 (ENSCHAG00000012920) ano2b (ENSCHAG00000012927) cd9b (ENSCHAG00000013021) itfg2 (ENSCHAG00000013047) washc3 (ENSCHAG00000013215) dram1 (ENSCHAG00000013293) itfg2 (ENSCHAG00000013298) Otophysi ANCESTRAL SPECIES 172 ENSGT00940000158612 ENSGT00390000008140.l ENSGT01030000234648.a.b.a.a.b.cb.b.a ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.a ENSGT00940000156567.a.a ENSGT00940000157073.b ENSGT00390000008099 ENSGT00940000155529.B ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ENSGT00940000166253.a ENSGT00390000018424 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00390000007725.A.a ENSGT00940000178699 ENSGT00940000155840.B ENSGT00940000155083.b.b Characiphysae ANCESTRAL SPECIES 62 ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140.k.a ENSGT01030000234648.a.b.a.a.b.cb.b.a ENSGT01100000263518.B.b.b.b ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.a ENSGT00940000156567.a.a ENSGT00940000157073.b ENSGT00390000008099 ENSGT00940000155529.B ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ENSGT00940000166253.a ENSGT00390000018424 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000157777 ENSGT00940000157998 ENSGT00530000063626.b ENSGT00390000001285.i ENSGT00950000183039.A ENSGT00940000156088.c.a ENSGT00940000157212.B ENSGT00940000166983 ENSGT00940000156786.r ENSGT00390000017998 ENSGT00940000160214 ENSGT00390000011055 ENSGT00390000009045 ENSGT01030000234809 Channel catfish MODERN SPECIES 10 ENSIPUG00000015682 ENSIPUG00000015691 ENSIPUG00000015705 ENSIPUG00000015713 ENSIPUG00000015729 gpr37b (ENSIPUG00000015746) ENSIPUG00000015753 lmod2 (ENSIPUG00000015777) asb15b (ENSIPUG00000015780) NDUFA5 (ENSIPUG00000015789) PTPRZ1 (ENSIPUG00000015816) coa6 (ENSIPUG00000015928) slc13a4 (ENSIPUG00000015941) ccdc42 (ENSIPUG00000015971) c19h12orf56 (ENSIPUG00000015998) SSBP1 (ENSIPUG00000016030) #22 creb3l2 (ENSIPUG00000016066) best3 (ENSIPUG00000016090) ENSIPUG00000016132 ENSIPUG00000016178 ENSIPUG00000016189 ENSIPUG00000016200 rab3ip (ENSIPUG00000016232) Myrfl (ENSIPUG00000016303) CNOT2 (ENSIPUG00000016424) Kcnmb4 (ENSIPUG00000016468) ptprb (ENSIPUG00000016497) ptprr (ENSIPUG00000016657) ENSIPUG00000016676 ENSIPUG00000016695 RAB21 (ENSIPUG00000016721) Characiphysae_b ANCESTRAL SPECIES 106 ENSGT01030000234637.a.b ENSGT00940000158612 ENSGT00390000008140.k.a ENSGT01030000234648.a.b.a.a.b.cb.b.a ENSGT01100000263518.B.b.b.b ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.a ENSGT00940000156567.a.a ENSGT00940000157073.b ENSGT00390000008099 ENSGT00940000155529.B ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ENSGT00940000166253.a ENSGT00390000018424 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000157777 ENSGT00940000157998 ENSGT00530000063626.b ENSGT00390000001285.i ENSGT00950000183039.A ENSGT00940000156088.c.a ENSGT00940000157212.B ENSGT00940000166983 ENSGT00940000156786.r ENSGT00390000017998 ENSGT00940000160214 ENSGT00390000011055 ENSGT00390000009045 ENSGT00530000063712.a.b Characoidei ANCESTRAL SPECIES 164 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000157777 ENSGT00940000157998 ENSGT00530000063626.b ENSGT00390000001285.i ENSGT00950000183039.A ENSGT00940000156088.c.a ENSGT00940000157212.B ENSGT00940000166983 ENSGT00940000156786.r ENSGT00390000017998 ENSGT00390000011055 ENSGT00390000009045 ENSGT01030000234809 ENSGT00530000063712.a.b Red-bellied piranha MODERN SPECIES 173 ENSPNAG00000006815 si:ch211-51e12.7 (ENSPNAG00000020649) mrps10 (ENSPNAG00000020655) ENSPNAG00000020669 ube2h (ENSPNAG00000020697) nrf1 (ENSPNAG00000020732) zc3hc1 (ENSPNAG00000020746) mrpl42 (ENSPNAG00000020753) ENSPNAG00000020761 zgc:162331 (ENSPNAG00000020798) coa6 (ENSPNAG00000020843) slc13a4 (ENSPNAG00000020920) ENSPNAG00000020950 tmem181 (ENSPNAG00000021072) tulp4a (ENSPNAG00000021137) ssbp1 (ENSPNAG00000021144) #22 creb3l2 (ENSPNAG00000021149) BEST3 (ENSPNAG00000021155) rab3ip (ENSPNAG00000021259) MYRFL (ENSPNAG00000021437) CNOT2 (ENSPNAG00000021540) KCNMB4 (ENSPNAG00000021578) ptprb (ENSPNAG00000021608) PTPRR (ENSPNAG00000005462) ENSPNAG00000021778 rab21 (ENSPNAG00000021810) ENSPNAG00000021844 COG5 (ENSPNAG00000021927) dus4l (ENSPNAG00000021961) bcap29 (ENSPNAG00000021999) slco1c1 (ENSPNAG00000022055) Mexicana tetra MODERN SPECIES 81 ssbp1 (ENSAMXG00000030696) #22 creb3l2 (ENSAMXG00000001763) BEST3 (ENSAMXG00000021060) rab3ip (ENSAMXG00000021045) MYRFL (ENSAMXG00000021027) Electric eel MODERN SPECIES 110 ENSEEEG00000020328 ZNF800 (ENSEEEG00000020329) GRM8 (ENSEEEG00000020332) ENSEEEG00000020336 gpr37b (ENSEEEG00000020338) TMEM229A (ENSEEEG00000020342) waslb (ENSEEEG00000020345) LMOD2 (ENSEEEG00000020347) asb15b (ENSEEEG00000020349) ndufa5 (ENSEEEG00000020352) ENSEEEG00000020359 coa6 (ENSEEEG00000020365) slc13a4 (ENSEEEG00000020366) zgc:162331 (ENSEEEG00000020369) ENSEEEG00000020370 ssbp1 (ENSEEEG00000020375) #22 creb3l2 (ENSEEEG00000020384) BEST3 (ENSEEEG00000020390) rab3ip (ENSEEEG00000020398) MYRFL (ENSEEEG00000020403) KCNMB4 (ENSEEEG00000020408) ptprb (ENSEEEG00000020418) PTPRR (ENSEEEG00000020462) ENSEEEG00000020672 rab21 (ENSEEEG00000020674) TMEM19 (ENSEEEG00000020675) LGR5 (ENSEEEG00000020676) ENSEEEG00000020677 mrps10 (ENSEEEG00000020679) ENSEEEG00000020680 msgn1 (ENSEEEG00000020681) Cyprinoidei ANCESTRAL SPECIES 62 ENSGT00940000158612 ENSGT00390000008140.l ENSGT01030000234648.a.b.a.a.b.cb.b.a ENSGT00940000163911.a.b ENSGT01100000263518.B.b.b.b ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.a ENSGT00940000156567.a.a ENSGT00940000157073.b ENSGT00390000008099 ENSGT00940000155529.B ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ENSGT00940000166253.a ENSGT00390000018424 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00390000007725.A.a ENSGT00940000178699 ENSGT00940000155840.B ENSGT00940000155083.b.b ENSGT00640000091917 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00390000002796.fb #22 Cyprininae_a ANCESTRAL SPECIES 175 ENSGT00940000169368 ENSGT00390000010899.a.b.b.b.h ENSGT00730000110895.b.a.o.a.j.b ENSGT00940000156567.a.a.c.a.a ENSGT00940000157073.b.a ENSGT00390000008099.fc ENSGT00940000155529.B.a ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b.b ENSGT00940000166253.a.b ENSGT00390000002796.fb #22 ENSGT00390000002796.gb.a.a #22 ENSGT00940000157659.a ENSGT00940000158094.s ENSGT00940000154318.A.a.a ENSGT00940000157502.o.a ENSGT00440000039984.b ENSGT00940000158420.d.b ENSGT00940000158420.d.a ENSGT00940000159226.l ENSGT00390000007725.A.a.j ENSGT00940000178699 ENSGT00940000155840.B.f ENSGT00940000155083.b.b.a ENSGT00640000091917 ENSGT00940000166696.a.a Common carp reference DUPLICATION Common carp reference MODERN SPECIES 8 ENSCCRG00000033512 SYPL1 (ENSCCRG00000034117) znf800b (ENSCCRG00000002416) GRM8 (ENSCCRG00000082897) ENSCCRG00000035847 ENSCCRG00000062091 gpr37b (ENSCCRG00000005448) ENSCCRG00000005453 waslb (ENSCCRG00000005466) LMOD2 (ENSCCRG00000070775) asb15b (ENSCCRG00000005552) ndufa5 (ENSCCRG00000005566) ENSCCRG00000005616 slc13a4 (ENSCCRG00000082740) zgc:162331 (ENSCCRG00000029327) ssbp1 (ENSCCRG00000029330) #22 creb3l2 (ENSCCRG00000029340) ENSCCRG00000008512 ENSCCRG00000056115 RASSF3 (ENSCCRG00000005556) gnsa (ENSCCRG00000005582) TBC1D30 (ENSCCRG00000005653) ntf3 (ENSCCRG00000027476) ENSCCRG00000062584 ano2b (ENSCCRG00000073252) cd9b (ENSCCRG00000040107) ENSCCRG00000025332 ENSCCRG00000060734 ENSCCRG00000044290 zgc:113263 (ENSCCRG00000011864) apex1 (ENSCCRG00000075343) Common carp reference MODERN SPECIES 36 znf800b (ENSCCRG00000068618) GRM8 (ENSCCRG00000062488) ENSCCRG00000064462 ENSCCRG00000011690 gpr37b (ENSCCRG00000011699) ENSCCRG00000076753 waslb (ENSCCRG00000038750) ENSCCRG00000038747 asb15b (ENSCCRG00000082179) ndufa5 (ENSCCRG00000070290) ENSCCRG00000010636 ENSCCRG00000001759 zgc:162331 (ENSCCRG00000049880) slc13a4 (ENSCCRG00000049879) ENSCCRG00000010596 ssbp1 (ENSCCRG00000010595) #22 creb3l2 (ENSCCRG00000010591) ENSCCRG00000029345 ENSCCRG00000069415 RASSF3 (ENSCCRG00000056914) gnsa (ENSCCRG00000005767) TBC1D30 (ENSCCRG00000057887) ntf3 (ENSCCRG00000066858) ano2b (ENSCCRG00000025025) cd9b (ENSCCRG00000027917) ENSCCRG00000040118 ENSCCRG00000027919 ENSCCRG00000071015 selenoo2 (ENSCCRG00000081385) ENSCCRG00000068433 ENSCCRG00000075796 Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 376 ENSGT01030000234648.a.b.a.a.b.cb.b.a.a ENSGT00940000163911.a.b.n ENSGT01100000263518.B.b.b.b.f ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.a.j.b ENSGT00940000156567.a.a.c.a.a ENSGT00940000157073.b.a ENSGT00390000008099.fc ENSGT00940000155529.B.a ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b.b ENSGT00940000166253.a.b ENSGT00390000002796.gb.a.b #22 ENSGT00390000002796.gb.a.a #22 ENSGT00940000157659.a ENSGT00940000158094.s ENSGT00940000154318.A.a.a ENSGT00940000157502.o.a ENSGT00440000039984.b ENSGT00940000158420.d.b ENSGT00940000159226.l ENSGT00390000007725.A.a.j ENSGT00940000178699 ENSGT00940000155840.B.f ENSGT00940000155083.b.b.a ENSGT00640000091917 ENSGT00940000166696.a.a ENSGT00390000005508.a.b.b ENSGT00940000165434.a Cyprininae_a ANCESTRAL SPECIES 175 ENSGT00940000169368 ENSGT00390000010899.a.b.b.b.h ENSGT00730000110895.b.a.o.a.j.b ENSGT00940000156567.a.a.c.a.a ENSGT00940000157073.b.a ENSGT00390000008099.fc ENSGT00940000155529.B.a ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b.b ENSGT00940000166253.a.b ENSGT00390000002796.fb #22 ENSGT00390000002796.gb.a.a #22 ENSGT00940000157659.a ENSGT00940000158094.s ENSGT00940000154318.A.a.a ENSGT00940000157502.o.a ENSGT00440000039984.b ENSGT00940000158420.d.b ENSGT00940000158420.d.a ENSGT00940000159226.l ENSGT00390000007725.A.a.j ENSGT00940000178699 ENSGT00940000155840.B.f ENSGT00940000155083.b.b.a ENSGT00640000091917 ENSGT00940000166696.a.a ENSGT00390000005508.a.b.b Golden-line barbel MODERN SPECIES 55 SYPL1 (ENSSGRG00000042860) ATXN7L1 (ENSSGRG00000042861) znf800b (ENSSGRG00000042862) GRM8 (ENSSGRG00000042863) ENSSGRG00000042865 gpr37b (ENSSGRG00000042868) TMEM229A (ENSSGRG00000042869) ENSSGRG00000042870 ENSSGRG00000042876 asb15b (ENSSGRG00000042877) PTPRZ1 (ENSSGRG00000042885) coa6 (ENSSGRG00000043402) slc13a4 (ENSSGRG00000043403) zgc:162331 (ENSSGRG00000043404) ENSSGRG00000043405 ssbp1 (ENSSGRG00000043406) #22 creb3l2 (ENSSGRG00000043426) ENSSGRG00000043523 RASSF3 (ENSSGRG00000043644) zgc:194209 (ENSSGRG00000043645) gnsa (ENSSGRG00000043647) TBC1D30 (ENSSGRG00000044207) ntf3 (ENSSGRG00000044208) ano2b (ENSSGRG00000044215) cd9b (ENSSGRG00000044327) SMKR1 (ENSSGRG00000044383) ENSSGRG00000044385 selenoo2 (ENSSGRG00000044386) ENSSGRG00000044388 ENSSGRG00000044411 zgc:113263 (ENSSGRG00000044418) Goldfish MODERN SPECIES 33 ENSCARG00000007431 ENSCARG00000007388 plekha5 (ENSCARG00000007235) aebp2 (ENSCARG00000020323) gpr37b (ENSCARG00000020276) ENSCARG00000020269 TMEM229A (ENSCARG00000020267) waslb (ENSCARG00000020261) LMOD2 (ENSCARG00000020255) asb15b (ENSCARG00000020245) ndufa5 (ENSCARG00000020237) PTPRZ1 (ENSCARG00000018460) coa6 (ENSCARG00000018334) slc13a4 (ENSCARG00000018329) zgc:162331 (ENSCARG00000018323) ssbp1 (ENSCARG00000018312) #22 creb3l2 (ENSCARG00000018251) ENSCARG00000017741 ENSCARG00000017653 RASSF3 (ENSCARG00000017637) zgc:194209 (ENSCARG00000017619) gnsa (ENSCARG00000016806) TBC1D30 (ENSCARG00000016634) ntf3 (ENSCARG00000016600) tmem63a (ENSCARG00000016375) rsph9 (ENSCARG00000016345) vegfab (ENSCARG00000016325) si:dkey-14d8.6 (ENSCARG00000016315) mapk11 (ENSCARG00000016242) ENSCARG00000016211 si:dkey-39a18.1 (ENSCARG00000016186) Cyprininae ANCESTRAL SPECIES 376 ENSGT01030000234648.a.b.a.a.b.cb.b.a.a ENSGT00940000163911.a.b.n ENSGT01100000263518.B.b.b.b.f ENSGT00390000010899.a.b.b.b ENSGT00730000110895.b.a.o.a.j.b ENSGT00940000156567.a.a.c.a.a ENSGT00940000157073.b.a ENSGT00390000008099.fc ENSGT00940000155529.B.a ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b.b ENSGT00940000166253.a.b ENSGT00390000002796.gb.a.b #22 ENSGT00390000002796.gb.a.a #22 ENSGT00940000157659.a ENSGT00940000158094.s ENSGT00940000154318.A.a.a ENSGT00940000157502.o.a ENSGT00440000039984.b ENSGT00940000158420.d.b ENSGT00940000159226.l ENSGT00390000007725.A.a.j ENSGT00940000178699 ENSGT00940000155840.B.f ENSGT00940000155083.b.b.a ENSGT00640000091917 ENSGT00940000166696.a.a ENSGT00390000005508.a.b.b Goldfish MODERN SPECIES 33 ano2b (ENSCARG00000004923) cd9b (ENSCARG00000005349) SMKR1 (ENSCARG00000005393) ENSCARG00000005400 ENSCARG00000005409 gpr37b (ENSCARG00000005421) TMEM229A (ENSCARG00000005429) waslb (ENSCARG00000005435) LMOD2 (ENSCARG00000005440) asb15b (ENSCARG00000005447) ndufa5 (ENSCARG00000005454) ENSCARG00000005643 coa6 (ENSCARG00000010855) slc13a4 (ENSCARG00000010875) zgc:162331 (ENSCARG00000010961) ssbp1 (ENSCARG00000010969) #22 creb3l2 (ENSCARG00000010985) ENSCARG00000011204 ENSCARG00000011215 RASSF3 (ENSCARG00000011227) zgc:194209 (ENSCARG00000011286) gnsa (ENSCARG00000011348) TBC1D30 (ENSCARG00000011893) ntf3 (ENSCARG00000011989) ano2b (ENSCARG00000012098) cd9b (ENSCARG00000014837) SMKR1 (ENSCARG00000014857) ENSCARG00000014863 ENSCARG00000014875 ENSCARG00000014933 apex1 (ENSCARG00000015028) Cyprininae_a ANCESTRAL SPECIES 176 ENSGT01100000263518.B.b.b.b.e ENSGT01030000234648.a.b.a.a.b.cb.b.a.a ENSGT00940000163911.a.b.n ENSGT01100000263518.B.b.b.b.f ENSGT00390000010899.a.b.b.b.g ENSGT00970000193473 ENSGT00940000156567.a.a.c.b ENSGT00730000110895.b.a.o.a.j.a ENSGT00940000156567.a.a.c.a.b ENSGT00940000157073.b.b ENSGT00390000008099.ec ENSGT00940000155529.B.b ENSGT01030000234550.a.a.d.a.b.a ENSGT00940000166253.a.a ENSGT00390000018424 ENSGT00390000002796.gb.a.b #22 ENSGT00940000157659.b ENSGT00940000158094.t ENSGT00940000154318.A.a.b ENSGT00940000157502.o.b ENSGT00940000158420.c ENSGT00940000159226.k ENSGT00390000007725.A.a.i ENSGT00940000155840.B.e ENSGT00940000155083.b.b.b Golden-line barbel MODERN SPECIES 32 GRM8 (ENSSGRG00000029272) ENSSGRG00000029273 TMEM229A (ENSSGRG00000029274) waslb (ENSSGRG00000029275) LMOD2 (ENSSGRG00000029281) asb15b (ENSSGRG00000029283) ndufa5 (ENSSGRG00000029286) slc13a4 (ENSSGRG00000029307) zgc:162331 (ENSSGRG00000029317) ENSSGRG00000029324 ssbp1 (ENSSGRG00000029326) #22 creb3l2 (ENSSGRG00000029329) ENSSGRG00000029332 ENSSGRG00000029415 RASSF3 (ENSSGRG00000029416) gnsa (ENSSGRG00000029417) TBC1D30 (ENSSGRG00000029419) ntf3 (ENSSGRG00000029420) ano2b (ENSSGRG00000029421) cd9b (ENSSGRG00000029428) ENSSGRG00000029458 selenoo2 (ENSSGRG00000029471) ENSSGRG00000029473 ENSSGRG00000029481 zgc:113263 (ENSSGRG00000029482) apex1 (ENSSGRG00000029483) Cyprininae ANCESTRAL SPECIES 2 ENSGT00730000110895.b.a.o.a.j.a ENSGT00940000156567.a.a.c.a.b ENSGT00940000157073.b.b ENSGT00390000008099.ec ENSGT00940000155529.B.b ENSGT01030000234550.a.a.d.a.b.a ENSGT00940000166253.a.a ENSGT00390000018424 ENSGT00390000002796.gb.b #22 ENSGT00940000157659.b ENSGT00940000158094.t ENSGT00940000154318.A.a.b ENSGT00940000157502.o.b ENSGT00940000158420.c ENSGT00940000159226.k ENSGT00390000007725.A.a.i ENSGT00940000155840.B.e ENSGT00940000155083.b.b.b ENSGT00940000166696.a.b ENSGT00390000005508.a.b.a ENSGT00940000165434.b ENSGT01100000263556.a.a.q.d.k ENSGT00400000022326.b.a.a.f ENSGT00530000063540.b.b Goldfish DUPLICATION Goldfish MODERN SPECIES 21 mrps10 (ENSCARG00000060588) tulp4a (ENSCARG00000060522) tmem181 (ENSCARG00000060459) GRM8 (ENSCARG00000060371) ENSCARG00000060354 gpr37b (ENSCARG00000060337) TMEM229A (ENSCARG00000060320) waslb (ENSCARG00000060224) ENSCARG00000060202 asb15b (ENSCARG00000060176) ndufa5 (ENSCARG00000060170) ENSCARG00000059001 slc13a4 (ENSCARG00000058885) zgc:162331 (ENSCARG00000058857) ENSCARG00000058832 ssbp1 (ENSCARG00000058814) #22 creb3l2 (ENSCARG00000058549) ENSCARG00000057659 ENSCARG00000057647 RASSF3 (ENSCARG00000057636) gnsa (ENSCARG00000056832) TBC1D30 (ENSCARG00000056624) ntf3 (ENSCARG00000056604) ano2b (ENSCARG00000053157) cd9b (ENSCARG00000053023) ENSCARG00000053009 selenoo2 (ENSCARG00000052967) ENSCARG00000052884 ENSCARG00000052840 tmem63a (ENSCARG00000052813) ENSCARG00000052258 Goldfish MODERN SPECIES 21 si:ch211-214j24.10 (ENSCARG00000004625) osgep (ENSCARG00000004585) apex1 (ENSCARG00000004467) zgc:113263 (ENSCARG00000004387) ENSCARG00000004303 ENSCARG00000004205 selenoo2 (ENSCARG00000004177) ENSCARG00000004109 waslb (ENSCARG00000004054) asb15b (ENSCARG00000068095) ndufa5 (ENSCARG00000068088) ENSCARG00000067778 slc13a4 (ENSCARG00000067754) zgc:162331 (ENSCARG00000067749) ENSCARG00000067737 ssbp1 (ENSCARG00000067720) #22 creb3l2 (ENSCARG00000067645) tulp4a (ENSCARG00000067629) mrps10 (ENSCARG00000067614) ost4 (ENSCARG00000067610) agbl5 (ENSCARG00000067599) ENSCARG00000067575 apex1 (ENSCARG00000067516) osgep (ENSCARG00000067480) si:ch211-214j24.10 (ENSCARG00000067467) TBC1D30 (ENSCARG00000067418) gnsa (ENSCARG00000067141) RASSF3 (ENSCARG00000067123) ENSCARG00000067118 sim1b (ENSCARG00000067109) ENSCARG00000066996 Zebrafish MODERN SPECIES 19 ENSDARG00000045851 rad51ap1 (ENSDARG00000045853) fgf23 (ENSDARG00000045854) fgf6b (ENSDARG00000045856) tigarb (ENSDARG00000045858) ccnd2b (ENSDARG00000070408) tmem209 (ENSDARG00000039340) ahcyl2b (ENSDARG00000039343) ENSDARG00000059003 ndufa5 (ENSDARG00000039346) PTPRZ1 (ENSDARG00000020871) coa6 (ENSDARG00000092677) slc13a4 (ENSDARG00000059053) zgc:162331 (ENSDARG00000069607) ENSDARG00000073963 ssbp1 (ENSDARG00000039350) #22 creb3l2 (ENSDARG00000063563) DGKI (ENSDARG00000063578) ENSDARG00000090401 RASSF3 (ENSDARG00000059064) zgc:194209 (ENSDARG00000039356) gnsa (ENSDARG00000023766) TBC1D30 (ENSDARG00000075281) ntf3 (ENSDARG00000059043) ENSDARG00000115613 ano2b (ENSDARG00000101363) cd9b (ENSDARG00000016691) smkr1 (ENSDARG00000107526) asb15b (ENSDARG00000045863) LMOD2 (ENSDARG00000045864) waslb (ENSDARG00000006283) Euteleosteomorpha ANCESTRAL SPECIES 1 ENSGT00510000048519.b ENSGT01030000234874.b ENSGT00940000156628.d ENSGT01080000257336.b.e.b.a.a.c ENSGT00390000011863.d.a.b ENSGT01050000244841.A.b.b.a.b ENSGT00390000011239.i ENSGT00940000158160 ENSGT00940000156858 ENSGT00390000011239.j ENSGT00940000155529.B ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ENSGT00940000166253 ENSGT00390000018424 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00390000007725.A.a ENSGT00940000179100 ENSGT00940000155840.B ENSGT00940000155083.b.a.b ENSGT00940000156000 ENSGT00940000156016 ENSGT00390000010221 ENSGT00390000013550 Acanthomorphata ANCESTRAL SPECIES 47 ENSGT00940000155083.b.a.b ENSGT00390000018424 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT01040000240375.D Euacanthomorphacea ANCESTRAL SPECIES 64 ENSGT00940000157779 ENSGT00390000013550 ENSGT00390000010221 ENSGT00940000156016 ENSGT00940000156000 ENSGT00940000155083.b.a.b ENSGT00390000018424 ENSGT01010000222336.b.a.b.a ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Percomorphaceae ANCESTRAL SPECIES 35 ENSGT00940000158113 ENSGT00390000007831 ENSGT00940000158153.a ENSGT00390000011055 ENSGT00940000168658 ENSGT00940000155878 ENSGT00940000158580 ENSGT00940000157779 ENSGT00390000013550 ENSGT00390000010221 ENSGT00940000156016 ENSGT00940000156000 ENSGT00940000155083.b.a.b ENSGT00390000018424 ENSGT01010000222336.b.a.b.a ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Percomorphaceae_B ANCESTRAL SPECIES 21 ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000178380 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Ovalentaria ANCESTRAL SPECIES 22 ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000178380 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Atherinomorphae ANCESTRAL SPECIES 21 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00910000145367 ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Cyprinodontiformes ANCESTRAL SPECIES 19 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00910000145367 ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247.n Aplocheiloidei ANCESTRAL SPECIES 14 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247.n Mangrove rivulus MODERN SPECIES 19 elapor2b (ENSKMAG00000013371) tspan9b (ENSKMAG00000013466) amdhd1 (ENSKMAG00000013501) snrpf (ENSKMAG00000013566) ntn4 (ENSKMAG00000013615) usp44 (ENSKMAG00000013656) metap2b (ENSKMAG00000013689) ENSKMAG00000013703 vezt (ENSKMAG00000013720) vezt (ENSKMAG00000013741) fgd6 (ENSKMAG00000013793) ndufa12 (ENSKMAG00000013822) TMCC3 (ENSKMAG00000013835) eri1 (ENSKMAG00000013859) ENSKMAG00000013890 ssbp1 (ENSKMAG00000013940) #22 creb3l2 (ENSKMAG00000013959) ENSKMAG00000014029 RASSF3 (ENSKMAG00000014132) zgc:194209 (ENSKMAG00000014188) gnsa (ENSKMAG00000014222) TBC1D30 (ENSKMAG00000014297) prkcq (ENSKMAG00000014441) SFMBT2 (ENSKMAG00000014513) tmem110l (ENSKMAG00000014592) ITIH5 (ENSKMAG00000014610) itih2 (ENSKMAG00000014637) kin (ENSKMAG00000014663) atp5f1c (ENSKMAG00000014707) gata3 (ENSKMAG00000014721) celf2 (ENSKMAG00000014795) Turquoise killifish MODERN SPECIES 1610 KLHL10 (ENSNFUG00015010625) tspan9b (ENSNFUG00015010611) amdhd1 (ENSNFUG00015010600) snrpf (ENSNFUG00015010592) NTN4 (ENSNFUG00015010587) USP44 (ENSNFUG00015010576) ENSNFUG00015010573 metap2b (ENSNFUG00015010243) VETZ (ENSNFUG00015010194) FGD6 (ENSNFUG00015010119) NDUFA12 (ENSNFUG00015010090) TMCC3 (ENSNFUG00015010067) ERI1 (ENSNFUG00015010052) ENSNFUG00015010042 LAMB1B (ENSNFUG00015008668) ssbp1 (ENSNFUG00015008635) #22 creb3l2 (ENSNFUG00015008623) DGKI (ENSNFUG00015005884) Nfu_g_1_011869 (ENSNFUG00015005723) RASSF3 (ENSNFUG00015005717) zgc:194209 (ENSNFUG00015005706) gnsa (ENSNFUG00015005647) FP102892.2 (ENSNFUG00015005562) ENSNFUG00015005547 PRKCQ (ENSNFUG00015005230) ENSNFUG00015005153 SFMBT2 (ENSNFUG00015005118) TMEM110L (ENSNFUG00015005100) ITIH5 (ENSNFUG00015005085) itih2 (ENSNFUG00015005010) kin (ENSNFUG00015004767) Cyprinodontoidei ANCESTRAL SPECIES 20 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00910000145367 ENSGT00940000157502 ENSGT00940000155180.b.b ENSGT00940000163946.a ENSGT00940000160821 ENSGT00940000157821.h.a ENSGT00940000153414.A ENSGT00940000160161.e.a ENSGT00950000183113.b.b.c.b ENSGT00390000002730.e.b ENSGT00650000094663 ENSGT00940000155067.a ENSGT00940000155067.b.a Poeciliinae ANCESTRAL SPECIES 19 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00910000145367 ENSGT00940000157502 ENSGT00940000155180.b.b ENSGT00940000163946.a ENSGT00940000160821 ENSGT00940000157821.h.a ENSGT00940000153414.A ENSGT00940000160161.e.a ENSGT00950000183113.b.b.c.b ENSGT00390000002730.e.b ENSGT00650000094663 ENSGT00940000155067.a ENSGT00940000155067.b.a Poecilia ANCESTRAL SPECIES 29 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094.y ENSGT00910000145367 ENSGT00940000157502 ENSGT00940000155180.b.b ENSGT00940000163946.a ENSGT00940000160821 ENSGT00940000157821.h.a ENSGT00940000153414.A ENSGT00940000160161.e.a ENSGT00950000183113.b.b.c.b ENSGT00390000002730.e.b ENSGT00650000094663 ENSGT00940000155067.a ENSGT00940000155067.b.a NAME_6 ANCESTRAL SPECIES 55 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094.z Sailfin molly MODERN SPECIES 771 tspan9b (ENSPLAG00000023935) amdhd1 (ENSPLAG00000023934) snrpf (ENSPLAG00000023932) ntn4 (ENSPLAG00000023930) usp44 (ENSPLAG00000023927) metap2b (ENSPLAG00000023926) vezt (ENSPLAG00000000002) fgd6 (ENSPLAG00000000843) ndufa12 (ENSPLAG00000000845) TMCC3 (ENSPLAG00000000846) eri1 (ENSPLAG00000000847) LAMB1 (ENSPLAG00000000849) ssbp1 (ENSPLAG00000000850) #22 creb3l2 (ENSPLAG00000000851) ENSPLAG00000000853 Amazon molly MODERN SPECIES 789 ENSPFOG00000020883 ntn4 (ENSPFOG00000013335) usp44 (ENSPFOG00000013282) metap2b (ENSPFOG00000013223) vezt (ENSPFOG00000013149) fgd6 (ENSPFOG00000013099) ndufa12 (ENSPFOG00000013079) TMCC3 (ENSPFOG00000013031) eri1 (ENSPFOG00000012985) LAMB1 (ENSPFOG00000012422) ssbp1 (ENSPFOG00000012362) #22 creb3l2 (ENSPFOG00000012285) Guppy MODERN SPECIES 454 cry1a (ENSPREG00000022582) ENSPREG00000022592 ENSPREG00000022605 tspan9b (ENSPREG00000022623) amdhd1 (ENSPREG00000022628) snrpf (ENSPREG00000022635) ntn4 (ENSPREG00000022641) usp44 (ENSPREG00000022650) metap2b (ENSPREG00000022656) vezt (ENSPREG00000022662) fgd6 (ENSPREG00000022677) ndufa12 (ENSPREG00000022681) TMCC3 (ENSPREG00000022689) eri1 (ENSPREG00000022705) ENSPREG00000022763 ssbp1 (ENSPREG00000022812) #22 creb3l2 (ENSPREG00000022832) ENSPREG00000022843 ENSPREG00000022852 ENSPREG00000022855 ccnd2b (ENSPREG00000022859) tigarb (ENSPREG00000022862) fgf23 (ENSPREG00000022868) fgf6b (ENSPREG00000022872) ENSPREG00000022878 GALNT8 (ENSPREG00000022881) ADA2 (ENSPREG00000022887) atp6v1e1b (ENSPREG00000022891) spic (ENSPREG00000022899) ENSPREG00000022906 mybpc1 (ENSPREG00000022909) Platyfish MODERN SPECIES 8 ergic2 (ENSXMAG00000004652) KDM7A (ENSXMAG00000004648) ENSXMAG00000028864 ndufb2 (ENSXMAG00000004646) KMT2E (ENSXMAG00000004619) lhfpl3 (ENSXMAG00000007241) orc5 (ENSXMAG00000004586) guca1a (ENSXMAG00000028378) ENSXMAG00000004571 ENSXMAG00000022166 llph (ENSXMAG00000004536) ENSXMAG00000004524 ENSXMAG00000004496 zgc:194209 (ENSXMAG00000004474) ENSXMAG00000004412 ssbp1 (ENSXMAG00000024949) #22 creb3l2 (ENSXMAG00000004377) ENSXMAG00000004330 ENSXMAG00000026207 ccnd2b (ENSXMAG00000021534) tigarb (ENSXMAG00000004294) fgf23 (ENSXMAG00000004291) fgf6b (ENSXMAG00000029319) ENSXMAG00000004282 GALNT8 (ENSXMAG00000004265) mybpc1 (ENSXMAG00000001498) ENSXMAG00000026773 ENSXMAG00000027306 chpt1 (ENSXMAG00000001481) gnptab (ENSXMAG00000001470) dram1 (ENSXMAG00000001465) NAME_4 ANCESTRAL SPECIES 16 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00910000145367 ENSGT00940000157502 ENSGT00940000155180.b.b ENSGT00940000163946.a ENSGT00940000160821 ENSGT00940000157821.h.a ENSGT00940000153414.A ENSGT00940000160161.e.a ENSGT00950000183113.b.b.c.b ENSGT00390000002730.e.b ENSGT00940000155067.a ENSGT00940000155067.b.a ENSGT00940000158254 Sheepshead minnow MODERN SPECIES 119 nrip2 (ENSCVAG00000015746) klhl42 (ENSCVAG00000015737) elapor2b (ENSCVAG00000015724) tspan9b (ENSCVAG00000015645) amdhd1 (ENSCVAG00000015623) snrpf (ENSCVAG00000000397) ntn4 (ENSCVAG00000015586) usp44 (ENSCVAG00000015551) metap2b (ENSCVAG00000015520) vezt (ENSCVAG00000015511) fgd6 (ENSCVAG00000015504) ndufa12 (ENSCVAG00000015488) TMCC3 (ENSCVAG00000015476) eri1 (ENSCVAG00000015467) ENSCVAG00000015459 ssbp1 (ENSCVAG00000015407) #22 creb3l2 (ENSCVAG00000015392) ENSCVAG00000015354 ENSCVAG00000015206 CCND2 (ENSCVAG00000015149) tigarb (ENSCVAG00000015132) fgf23 (ENSCVAG00000015105) fgf6b (ENSCVAG00000000391) rad51ap1 (ENSCVAG00000015065) GALNT8 (ENSCVAG00000015059) ADA2 (ENSCVAG00000015043) atp6v1e1b (ENSCVAG00000015035) spic (ENSCVAG00000015000) mybpc1 (ENSCVAG00000014979) chpt1 (ENSCVAG00000014651) gnptab (ENSCVAG00000014614) Mummichog MODERN SPECIES 2321 klhl42 (ENSFHEG00000003330) elapor2b (ENSFHEG00000000095) tspan9b (ENSFHEG00000003256) amdhd1 (ENSFHEG00000003252) snrpf (ENSFHEG00000003240) ntn4 (ENSFHEG00000003235) ENSFHEG00000003216 usp44 (ENSFHEG00000003209) metap2b (ENSFHEG00000003182) vezt (ENSFHEG00000003165) fgd6 (ENSFHEG00000003155) ndufa12 (ENSFHEG00000003134) TMCC3 (ENSFHEG00000003123) eri1 (ENSFHEG00000003119) ENSFHEG00000003096 ssbp1 (ENSFHEG00000002986) #22 creb3l2 (ENSFHEG00000002964) ENSFHEG00000002920 ENSFHEG00000002837 RASSF3 (ENSFHEG00000002833) ccnd2b (ENSFHEG00000002819) ENSFHEG00000002801 tigarb (ENSFHEG00000002794) fgf23 (ENSFHEG00000002751) fgf6b (ENSFHEG00000002719) rad51ap1 (ENSFHEG00000002712) GALNT8 (ENSFHEG00000002703) ADA2 (ENSFHEG00000002697) atp6v1e1b (ENSFHEG00000002682) spic (ENSFHEG00000002655) ENSFHEG00000002648 Oryzias ANCESTRAL SPECIES 20 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00910000145367 ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT01020000230394.e.a.a.a.a.b ENSGT00940000156680.b ENSGT00990000203615.a.a.b ENSGT00940000157926 Oryzias_a ANCESTRAL SPECIES 15 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000164757 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00910000145367 ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT01020000230394.e.a.a.a.a.b ENSGT00940000156680.b ENSGT00990000203615.a.a.b ENSGT00940000157926 Chinese medaka MODERN SPECIES 158 amdhd1 (ENSOSIG00000015537) ENSOSIG00000015538 ntn4 (ENSOSIG00000015539) usp44 (ENSOSIG00000015544) metap2b (ENSOSIG00000015553) vezt (ENSOSIG00000015888) fgd6 (ENSOSIG00000015891) ndufa12 (ENSOSIG00000016080) TMCC3 (ENSOSIG00000016082) eri1 (ENSOSIG00000016084) LAMB1 (ENSOSIG00000016093) ssbp1 (ENSOSIG00000016289) #22 creb3l2 (ENSOSIG00000016291) ENSOSIG00000016314 ENSOSIG00000016712 ENSOSIG00000016715 RASSF3 (ENSOSIG00000016718) zgc:194209 (ENSOSIG00000016720) gnsa (ENSOSIG00000016733) TBC1D30 (ENSOSIG00000016831) Japanese Medaka HdrR MODERN SPECIES 15 itfg2 (ENSORLG00000016526) nrip2 (ENSORLG00000016536) klhl42 (ENSORLG00000016542) ENSORLG00000016575 tspan9b (ENSORLG00000016594) amdhd1 (ENSORLG00000016609) NTN4 (ENSORLG00000016622) usp44 (ENSORLG00000016627) metap2b (ENSORLG00000016650) vezt (ENSORLG00000016663) fgd6 (ENSORLG00000016673) ndufa12 (ENSORLG00000023845) TMCC3 (ENSORLG00000016684) eri1 (ENSORLG00000025831) ENSORLG00000016748 ssbp1 (ENSORLG00000016758) #22 creb3l2 (ENSORLG00000016776) ENSORLG00000016792 ENSORLG00000022537 ENSORLG00000023711 ENSORLG00000016795 RASSF3 (ENSORLG00000022235) zgc:194209 (ENSORLG00000016812) gnsa (ENSORLG00000016835) TBC1D30 (ENSORLG00000016842) prkcq (ENSORLG00000016894) SFMBT2 (ENSORLG00000016910) tmem110l (ENSORLG00000016913) ITIH5 (ENSORLG00000016940) ENSORLG00000028191 ENSORLG00000017004 Oryzias_b ANCESTRAL SPECIES 19 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00910000145367 ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT01020000230394.e.a.a.a.a.b ENSGT00940000156680.b ENSGT00990000203615.a.a.b ENSGT00940000157926 Javanese ricefish MODERN SPECIES 15 itfg2 (ENSOJAG00000023327) nrip2 (ENSOJAG00000023325) klhl42 (ENSOJAG00000023323) elapor2b (ENSOJAG00000023275) tspan9b (ENSOJAG00000023257) amdhd1 (ENSOJAG00000023244) ntn4 (ENSOJAG00000023221) usp44 (ENSOJAG00000023208) METAP2 (ENSOJAG00000023181) vezt (ENSOJAG00000023164) ENSOJAG00000023148 ndufa12 (ENSOJAG00000023100) TMCC3 (ENSOJAG00000023094) eri1 (ENSOJAG00000023087) ENSOJAG00000022661 ssbp1 (ENSOJAG00000022628) #22 creb3l2 (ENSOJAG00000022612) ENSOJAG00000021975 ENSOJAG00000021962 RASSF3 (ENSOJAG00000021951) zgc:194209 (ENSOJAG00000021938) gnsa (ENSOJAG00000021645) TBC1D30 (ENSOJAG00000021626) prkcq (ENSOJAG00000021262) ENSOJAG00000021224 SFMBT2 (ENSOJAG00000021102) tmem110l (ENSOJAG00000021076) ITIH5 (ENSOJAG00000021070) plxnb2a.1 (ENSOJAG00000020869) ENSOJAG00000020852 ENSOJAG00000020846 Indian medaka MODERN SPECIES 2 elapor2b (ENSOMEG00000003209) nrip2 (ENSOMEG00000003128) klhl42 (ENSOMEG00000003121) tspan9b (ENSOMEG00000003109) amdhd1 (ENSOMEG00000003082) snrpf (ENSOMEG00000003018) ntn4 (ENSOMEG00000003007) usp44 (ENSOMEG00000002993) metap2b (ENSOMEG00000002985) vezt (ENSOMEG00000002973) fgd6 (ENSOMEG00000000640) ndufa12 (ENSOMEG00000023833) TMCC3 (ENSOMEG00000023830) eri1 (ENSOMEG00000023826) ENSOMEG00000023823 ssbp1 (ENSOMEG00000000638) #22 creb3l2 (ENSOMEG00000023801) DGKI (ENSOMEG00000023790) ENSOMEG00000023771 RASSF3 (ENSOMEG00000023764) zgc:194209 (ENSOMEG00000023753) gnsa (ENSOMEG00000023748) TBC1D30 (ENSOMEG00000000637) prkcq (ENSOMEG00000023735) ENSOMEG00000023729 SFMBT2 (ENSOMEG00000023721) tmem110l (ENSOMEG00000023709) ITIH5 (ENSOMEG00000023705) ENSOMEG00000023695 ENSOMEG00000023692 ENSOMEG00000023687 Ovalentaria_B ANCESTRAL SPECIES 23 ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000178380 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Cichlidae ANCESTRAL SPECIES 24 ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000178380 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Pseudocrenilabrinae ANCESTRAL SPECIES 21 ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000178380 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Pseudocrenilabrinae_A ANCESTRAL SPECIES 10 ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000178380 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903.p ENSGT00390000006837 ENSGT00940000159247 Haplochromini ANCESTRAL SPECIES 9 ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000178380 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000180356 ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903.p ENSGT00390000006837 Burton s mouthbrooder MODERN SPECIES 437 elapor2b (ENSHBUG00000008321) tspan9b (ENSHBUG00000008253) amdhd1 (ENSHBUG00000008199) ENSHBUG00000008160 ntn4 (ENSHBUG00000008139) ENSHBUG00000008093 usp44 (ENSHBUG00000008069) metap2b (ENSHBUG00000008050) vezt (ENSHBUG00000008040) ENSHBUG00000000203 fgd6 (ENSHBUG00000007999) ndufa12 (ENSHBUG00000007988) TMCC3 (ENSHBUG00000007971) eri1 (ENSHBUG00000007948) LAMB1 (ENSHBUG00000007936) ssbp1 (ENSHBUG00000007915) #22 creb3l2 (ENSHBUG00000007903) ENSHBUG00000007856 ENSHBUG00000007835 ENSHBUG00000007814 ENSHBUG00000007808 ENSHBUG00000007786 Haplochromini_A ANCESTRAL SPECIES 9 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000180568 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000180356 ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903.p P. nyererei MODERN SPECIES 487 nrip2 (ENSPNYG00000021862) klhl42 (ENSPNYG00000021854) elapor2b (ENSPNYG00000021790) tspan9b (ENSPNYG00000021764) amdhd1 (ENSPNYG00000021749) snrpf (ENSPNYG00000021712) ntn4 (ENSPNYG00000021688) usp44 (ENSPNYG00000021662) metap2b (ENSPNYG00000021636) vezt (ENSPNYG00000021619) fgd6 (ENSPNYG00000021583) ndufa12 (ENSPNYG00000021560) TMCC3 (ENSPNYG00000021542) eri1 (ENSPNYG00000021517) ENSPNYG00000021466 ssbp1 (ENSPNYG00000021438) #22 creb3l2 (ENSPNYG00000021410) ENSPNYG00000021386 ENSPNYG00000021347 ENSPNYG00000021332 ENSPNYG00000021320 ENSPNYG00000021296 Haplochromini_B ANCESTRAL SPECIES 11 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000180568 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903.p ENSGT00390000006837 Eastern happy MODERN SPECIES 8 klhl42 (ENSACLG00000016461) elapor2b (ENSACLG00000016340) tspan9b (ENSACLG00000016292) amdhd1 (ENSACLG00000016155) snrpf (ENSACLG00000016066) ntn4 (ENSACLG00000015962) usp44 (ENSACLG00000015861) metap2b (ENSACLG00000015833) ENSACLG00000015738 vezt (ENSACLG00000015688) fgd6 (ENSACLG00000015651) ndufa12 (ENSACLG00000015630) TMCC3 (ENSACLG00000015551) eri1 (ENSACLG00000015500) ENSACLG00000015274 ssbp1 (ENSACLG00000015211) #22 creb3l2 (ENSACLG00000015188) ENSACLG00000014884 ENSACLG00000014837 RASSF3 (ENSACLG00000014778) zgc:194209 (ENSACLG00000014710) gnsa (ENSACLG00000014621) TBC1D30 (ENSACLG00000014531) prkcq (ENSACLG00000014391) SFMBT2 (ENSACLG00000014262) tmem110l (ENSACLG00000014231) ITIH5 (ENSACLG00000014195) itih2 (ENSACLG00000014157) kin (ENSACLG00000014118) atp5f1c (ENSACLG00000014043) gata3 (ENSACLG00000013948) Zebra mbuna MODERN SPECIES 1099 tmem110l (ENSMZEG00005021724) SFMBT2 (ENSMZEG00005021734) prkcq (ENSMZEG00005000194) TBC1D30 (ENSMZEG00005000303) gnsa (ENSMZEG00005000335) zgc:194209 (ENSMZEG00005000418) RASSF3 (ENSMZEG00005000471) metap2b (ENSMZEG00005000627) vezt (ENSMZEG00005000672) fgd6 (ENSMZEG00005000689) ndufa12 (ENSMZEG00005000766) ENSMZEG00005000794 ENSMZEG00005000813 eri1 (ENSMZEG00005000837) ENSMZEG00005000865 ssbp1 (ENSMZEG00005000898) #22 creb3l2 (ENSMZEG00005000947) ENSMZEG00005000961 ENSMZEG00005000984 ENSMZEG00005001045 ENSMZEG00005001054 nrip2 (ENSMZEG00005001086) itfg2 (ENSMZEG00005001096) ascl1a (ENSMZEG00005001134) ENSMZEG00005001144 pah (ENSMZEG00005001158) th2 (ENSMZEG00005001193) nup37 (ENSMZEG00005001223) parpbp (ENSMZEG00005001242) pmch (ENSMZEG00005001251) igf1 (ENSMZEG00005001284) Lyretail cichlid MODERN SPECIES 291 klhl42 (ENSNBRG00000011450) elapor2b (ENSNBRG00000011472) tspan9b (ENSNBRG00000011565) amdhd1 (ENSNBRG00000011657) snrpf (ENSNBRG00000011682) ntn4 (ENSNBRG00000011696) usp44 (ENSNBRG00000011724) metap2b (ENSNBRG00000011759) vezt (ENSNBRG00000011771) fgd6 (ENSNBRG00000011809) ENSNBRG00000011853 ndufa12 (ENSNBRG00000011865) TMCC3 (ENSNBRG00000011882) eri1 (ENSNBRG00000011906) LAMB1 (ENSNBRG00000011939) ssbp1 (ENSNBRG00000012014) #22 creb3l2 (ENSNBRG00000012025) ENSNBRG00000012083 ENSNBRG00000012396 RASSF3 (ENSNBRG00000012408) zgc:194209 (ENSNBRG00000012426) gnsa (ENSNBRG00000012458) TBC1D30 (ENSNBRG00000012498) prkcq (ENSNBRG00000012529) SFMBT2 (ENSNBRG00000012576) tmem110l (ENSNBRG00000012624) ITIH5 (ENSNBRG00000012643) itih2 (ENSNBRG00000012689) kin (ENSNBRG00000012732) atp5f1c (ENSNBRG00000012754) gata3 (ENSNBRG00000012777) Nile tilapia MODERN SPECIES 8 elapor2b (ENSONIG00000017824) tspan9b (ENSONIG00000017829) amdhd1 (ENSONIG00000017833) ENSONIG00000034393 snrpf (ENSONIG00000031061) ntn4 (ENSONIG00000017835) usp44 (ENSONIG00000017839) metap2b (ENSONIG00000017841) vezt (ENSONIG00000017844) ENSONIG00000027739 fgd6 (ENSONIG00000017847) ndufa12 (ENSONIG00000017848) tmcc3 (ENSONIG00000017850) eri1 (ENSONIG00000017852) ENSONIG00000017855 ssbp1 (ENSONIG00000030370) #22 creb3l2 (ENSONIG00000017874) ENSONIG00000017878 ENSONIG00000043218 RASSF3 (ENSONIG00000017894) zgc:194209 (ENSONIG00000017895) gnsa (ENSONIG00000017902) TBC1D30 (ENSONIG00000017899) prkcq (ENSONIG00000017904) ENSONIG00000034072 SFMBT2 (ENSONIG00000017905) tmem110l (ENSONIG00000034372) ITIH5 (ENSONIG00000017909) itih2 (ENSONIG00000017917) kin (ENSONIG00000028327) atp5f1c (ENSONIG00000017924) Midas cichlid MODERN SPECIES 1037 ENSACIG00000004364 usp6nl (ENSACIG00000004335) celf2 (ENSACIG00000004318) ENSACIG00000004307 gata3 (ENSACIG00000004290) atp5f1c (ENSACIG00000004272) kin (ENSACIG00000004254) itih2 (ENSACIG00000004190) ndufa12 (ENSACIG00000004176) ENSACIG00000004165 eri1 (ENSACIG00000004140) ENSACIG00000004068 ssbp1 (ENSACIG00000004045) #22 creb3l2 (ENSACIG00000004005) ENSACIG00000003993 ENSACIG00000003894 RASSF3 (ENSACIG00000003867) zgc:194209 (ENSACIG00000003847) gnsa (ENSACIG00000003804) TBC1D30 (ENSACIG00000003749) prkcq (ENSACIG00000003700) SFMBT2 (ENSACIG00000003656) tmem110l (ENSACIG00000003637) ITIH5 (ENSACIG00000003510) Pomacentridae ANCESTRAL SPECIES 59 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00910000145367 ENSGT00940000157502 Pomacentridae_A ANCESTRAL SPECIES 58 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000157502 Amphiprion ANCESTRAL SPECIES 19 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT01090000260132.b.b.a.a.a ENSGT00940000158094 ENSGT00940000157502 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.n ENSGT00940000157777 ENSGT00390000003014 ENSGT00940000153561.b.b.g.b ENSGT00390000009250 ENSGT00730000111212 ENSGT00940000158692.f ENSGT00390000017740.a.a.p ENSGT00940000164058.j ENSGT00390000004106 ENSGT01020000230588 Orange clownfish MODERN SPECIES 13 klhl42 (ENSAPEG00000021941) elapor2b (ENSAPEG00000021953) tspan9b (ENSAPEG00000021973) amdhd1 (ENSAPEG00000021994) snrpf (ENSAPEG00000022022) ntn4 (ENSAPEG00000022097) ENSAPEG00000022142 usp44 (ENSAPEG00000022159) METAP2 (ENSAPEG00000022182) vezt (ENSAPEG00000022201) fgd6 (ENSAPEG00000022219) ndufa12 (ENSAPEG00000022253) TMCC3 (ENSAPEG00000022273) eri1 (ENSAPEG00000022307) ENSAPEG00000022315 ssbp1 (ENSAPEG00000022376) #22 creb3l2 (ENSAPEG00000022393) ENSAPEG00000022476 ENSAPEG00000022884 ENSAPEG00000022900 ENSAPEG00000022939 ENSAPEG00000022960 ENSAPEG00000022968 ENSAPEG00000022993 SHANK3 (ENSAPEG00000023070) TYMP (ENSAPEG00000023485) lsm8 (ENSAPEG00000023502) grip1 (ENSAPEG00000023516) cand1 (ENSAPEG00000023575) ENSAPEG00000023625 ENSAPEG00000023635 Clown anemonefish MODERN SPECIES 3619 TIMP4 (ENSAOCG00000022118) syn2b (ENSAOCG00000002127) PPARG (ENSAOCG00000022233) ENSAOCG00000022275 IFFO2 (ENSAOCG00000022285) ssbp1 (ENSAOCG00000022296) #22 creb3l2 (ENSAOCG00000022335) Spiny chromis MODERN SPECIES 961 ENSAPOG00000019673 ssbp1 (ENSAPOG00000019605) #22 creb3l2 (ENSAPOG00000019585) ENSAPOG00000019527 ENSAPOG00000000545 ENSAPOG00000000541 ATP6V1E1 (ENSAPOG00000001028) ADA2 (ENSAPOG00000019347) Bicolor damselfish MODERN SPECIES 952 eri1 (ENSSPAG00000015393) LAMB1 (ENSSPAG00000015291) ssbp1 (ENSSPAG00000015254) #22 creb3l2 (ENSSPAG00000015202) ENSSPAG00000015146 ENSSPAG00000015129 ENSSPAG00000015108 Percomorphaceae_C ANCESTRAL SPECIES 22 ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000178380 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Percomorphaceae_D ANCESTRAL SPECIES 22 ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000178380 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Anabantaria ANCESTRAL SPECIES 21 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Zig-zag eel MODERN SPECIES 15 ENSMAMG00000016311 klhl42 (ENSMAMG00000016338) ENSMAMG00000016348 ENSMAMG00000026753 amdhd1 (ENSMAMG00000016384) SNRPF (ENSMAMG00000016593) ntn4 (ENSMAMG00000016733) USP44 (ENSMAMG00000016772) METAP2 (ENSMAMG00000016805) vezt (ENSMAMG00000016818) fgd6 (ENSMAMG00000017007) ndufa12 (ENSMAMG00000027238) TMCC3 (ENSMAMG00000017033) ENSMAMG00000017044 ENSMAMG00000017078 ssbp1 (ENSMAMG00000026779) #22 creb3l2 (ENSMAMG00000017491) ENSMAMG00000017529 ENSMAMG00000017582 RASSF3 (ENSMAMG00000026100) zgc:194209 (ENSMAMG00000017617) gnsa (ENSMAMG00000017645) TBC1D30 (ENSMAMG00000017674) prkcq (ENSMAMG00000017681) SFMBT2 (ENSMAMG00000017712) tmem110l (ENSMAMG00000017744) ITIH5 (ENSMAMG00000017761) itih2 (ENSMAMG00000017776) kin (ENSMAMG00000017791) atp5f1c (ENSMAMG00000017829) gata3 (ENSMAMG00000017856) Anabantoidei ANCESTRAL SPECIES 21 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Climbing perch MODERN SPECIES 14 ENSATEG00000022782 klhl42 (ENSATEG00000022766) ENSATEG00000022701 ENSATEG00000022678 amdhd1 (ENSATEG00000022667) SNRPF (ENSATEG00000022625) ntn4 (ENSATEG00000022608) USP44 (ENSATEG00000022583) METAP2 (ENSATEG00000022567) vezt (ENSATEG00000022542) fgd6 (ENSATEG00000022513) ndufa12 (ENSATEG00000022496) TMCC3 (ENSATEG00000022484) ENSATEG00000022473 ENSATEG00000022445 ssbp1 (ENSATEG00000022433) #22 creb3l2 (ENSATEG00000022406) ENSATEG00000022325 ENSATEG00000022310 RASSF3 (ENSATEG00000025571) zgc:194209 (ENSATEG00000022279) gnsa (ENSATEG00000022252) TBC1D30 (ENSATEG00000022181) prkcq (ENSATEG00000022118) SFMBT2 (ENSATEG00000022088) tmem110l (ENSATEG00000022074) ITIH5 (ENSATEG00000022065) itih2 (ENSATEG00000022044) kin (ENSATEG00000022023) atp5f1c (ENSATEG00000022006) gata3 (ENSATEG00000022001) Siamese fighting fish MODERN SPECIES 20 ENSBSLG00000013103 ENSBSLG00000013628 ENSBSLG00000013636 dram1 (ENSBSLG00000013649) gnptab (ENSBSLG00000013665) chpt1 (ENSBSLG00000013714) mybpc1 (ENSBSLG00000013838) ENSBSLG00000015990 spic (ENSBSLG00000015993) atp6v1e1b (ENSBSLG00000016687) ENSBSLG00000017007 ENSBSLG00000017028 ENSBSLG00000017094 eri1 (ENSBSLG00000017106) ENSBSLG00000017158 ssbp1 (ENSBSLG00000017550) #22 creb3l2 (ENSBSLG00000017601) ENSBSLG00000017965 ENSBSLG00000020647 RASSF3 (ENSBSLG00000020651) gnsa (ENSBSLG00000021265) TBC1D30 (ENSBSLG00000021783) prkcq (ENSBSLG00000021973) SFMBT2 (ENSBSLG00000022028) tmem110l (ENSBSLG00000022179) ITIH5 (ENSBSLG00000022187) itih2 (ENSBSLG00000022197) kin (ENSBSLG00000022253) atp5f1c (ENSBSLG00000022302) gata3 (ENSBSLG00000022349) celf2 (ENSBSLG00000022453) Carangaria ANCESTRAL SPECIES 22 ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000178380 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Pleuronectoidei ANCESTRAL SPECIES 16 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Turbot MODERN SPECIES 11 ENSSMAG00000022137 klhl42 (ENSSMAG00000005334) ENSSMAG00000005360 ENSSMAG00000005457 amdhd1 (ENSSMAG00000005484) SNRPF (ENSSMAG00000005533) ntn4 (ENSSMAG00000005605) USP44 (ENSSMAG00000005649) METAP2 (ENSSMAG00000005667) vezt (ENSSMAG00000028160) fgd6 (ENSSMAG00000005702) ndufa12 (ENSSMAG00000005726) TMCC3 (ENSSMAG00000005752) ENSSMAG00000005907 ENSSMAG00000005808 ssbp1 (ENSSMAG00000005916) #22 creb3l2 (ENSSMAG00000005938) ENSSMAG00000005977 ENSSMAG00000006050 RASSF3 (ENSSMAG00000006056) RASSF3 (ENSSMAG00000021456) zgc:194209 (ENSSMAG00000006080) gnsa (ENSSMAG00000006110) TBC1D30 (ENSSMAG00000006172) prkcq (ENSSMAG00000006284) SFMBT2 (ENSSMAG00000006339) tmem110l (ENSSMAG00000006411) ITIH5 (ENSSMAG00000006453) itih2 (ENSSMAG00000006504) kin (ENSSMAG00000006582) atp5f1c (ENSSMAG00000006630) Tongue sole MODERN SPECIES 18 parpbp (ENSCSEG00000004674) ENSCSEG00000004687 igf1 (ENSCSEG00000004697) ENSCSEG00000004721 btbd11a (ENSCSEG00000004735) snrpf (ENSCSEG00000004748) ntn4 (ENSCSEG00000004754) usp44 (ENSCSEG00000004765) metap2b (ENSCSEG00000004778) vezt (ENSCSEG00000004802) fgd6 (ENSCSEG00000004819) ENSCSEG00000004837 TMCC3 (ENSCSEG00000005859) eri1 (ENSCSEG00000005863) ENSCSEG00000005872 ssbp1 (ENSCSEG00000005916) #22 creb3l2 (ENSCSEG00000005930) ENSCSEG00000005934 ENSCSEG00000005945 calua (ENSCSEG00000005947) tnpo3 (ENSCSEG00000005952) irf5 (ENSCSEG00000005964) atp6v1f (ENSCSEG00000005968) lamtor4 (ENSCSEG00000005985) dennd6b (ENSCSEG00000005989) gcc1 (ENSCSEG00000006000) arf5 (ENSCSEG00000006004) lta4h (ENSCSEG00000006012) ENSCSEG00000006018 ENSCSEG00000006020 ENSCSEG00000006026 Carangaria_A ANCESTRAL SPECIES 21 ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000178380 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Seriola ANCESTRAL SPECIES 9 ENSGT00950000182999.b.a.a ENSGT00940000160124 ENSGT00940000154983.c.b ENSGT00940000158225.i.a ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094.w ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000157926 ENSGT00940000156715 ENSGT00940000155461.A ENSGT00940000159247 ENSGT00390000006837 ENSGT00390000005903 ENSGT00940000157945 ENSGT00940000158317 ENSGT00940000153920.a.a Greater amberjack MODERN SPECIES 60 nrip2 (ENSSDUG00000016462) klhl42 (ENSSDUG00000016448) elapor2b (ENSSDUG00000016349) tspan9b (ENSSDUG00000016318) amdhd1 (ENSSDUG00000016290) snrpf (ENSSDUG00000016283) ntn4 (ENSSDUG00000016238) usp44 (ENSSDUG00000016194) metap2b (ENSSDUG00000016178) vezt (ENSSDUG00000016162) fgd6 (ENSSDUG00000016132) ndufa12 (ENSSDUG00000016121) TMCC3 (ENSSDUG00000016102) eri1 (ENSSDUG00000016085) ENSSDUG00000016000 ssbp1 (ENSSDUG00000015978) #22 creb3l2 (ENSSDUG00000015943) ENSSDUG00000015885 ENSSDUG00000015855 ENSSDUG00000015842 cfap45 (ENSSDUG00000015829) ENSSDUG00000015787 ENSSDUG00000015728 zgc:194209 (ENSSDUG00000015708) gnsa (ENSSDUG00000015659) ECHDC3 (ENSSDUG00000015647) usp6nl (ENSSDUG00000015625) celf2 (ENSSDUG00000015603) gata3 (ENSSDUG00000015570) atp5f1c (ENSSDUG00000015543) kin (ENSSDUG00000015489) Yellowtail amberjack MODERN SPECIES 3095 ENSSLDG00000008655 fgd6 (ENSSLDG00000008612) ndufa12 (ENSSLDG00000008591) TMCC3 (ENSSLDG00000008577) eri1 (ENSSLDG00000008561) ENSSLDG00000008453 ssbp1 (ENSSLDG00000008420) #22 ENSSLDG00000008405 ENSSLDG00000008394 ENSSLDG00000008267 ENSSLDG00000008235 cfap45 (ENSSLDG00000008221) ENSSLDG00000008205 zgc:194209 (ENSSLDG00000008175) gnsa (ENSSLDG00000008135) ECHDC3 (ENSSLDG00000008095) Barramundi perch MODERN SPECIES 292 tspan9b (ENSLCAG00010026930) elapor2b (ENSLCAG00010026919) klhl42 (ENSLCAG00010026897) amdhd1 (ENSLCAG00010026896) snrpf (ENSLCAG00010026895) ntn4 (ENSLCAG00010026894) usp44 (ENSLCAG00010026893) metap2b (ENSLCAG00010026892) vezt (ENSLCAG00010026891) ENSLCAG00010026889 fgd6 (ENSLCAG00010026885) ndufa12 (ENSLCAG00010026870) TMCC3 (ENSLCAG00010026868) eri1 (ENSLCAG00010026866) ENSLCAG00010026697 ssbp1 (ENSLCAG00010026586) #22 ENSLCAG00010026584 Eupercaria ANCESTRAL SPECIES 21 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00940000157779 ENSGT00390000013550 ENSGT00390000010221 ENSGT00940000155083.b.a.b ENSGT00390000018424 ENSGT01010000222336.b.a.b.a ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00910000145367 ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Tetraodontidae ANCESTRAL SPECIES 17 ENSGT00940000159081 ENSGT01030000234576.D.a.a.b.a.a.a.a.a.b.a.a ENSGT00940000156419.b ENSGT00940000165530.a.b ENSGT00940000155455.g ENSGT00530000063817.b.b ENSGT00940000154709.a.a ENSGT00940000158899 ENSGT01050000244951.a.b.a.b.b ENSGT00940000153962.b ENSGT00940000155394.i.a ENSGT00390000000406.d ENSGT00940000156120.a ENSGT00390000013067.l.l ENSGT01010000222336.b.a.b.a ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000157502 ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247.j ENSGT00940000155461.A ENSGT00940000156715 Fugu MODERN SPECIES 9 pmch (ENSTRUG00000014356) igf1 (ENSTRUG00000022135) ENSTRUG00000025881 btbd11a (ENSTRUG00000014167) cry1a (ENSTRUG00000014032) MTERF2 (ENSTRUG00000014030) tnnt2c (ENSTRUG00000014014) syt10 (ENSTRUG00000013939) ENSTRUG00000013873 cyb5r3 (ENSTRUG00000020838) syt1a (ENSTRUG00000013727) pawr (ENSTRUG00000013694) ppp1r12a (ENSTRUG00000013358) rps16 (ENSTRUG00000028064) acot14 (ENSTRUG00000013235) ssbp1 (ENSTRUG00000013183) #22 creb3l2 (ENSTRUG00000013114) RASSF3 (ENSTRUG00000012661) gnsa (ENSTRUG00000012451) TBC1D30 (ENSTRUG00000012364) prkcq (ENSTRUG00000011933) SFMBT2 (ENSTRUG00000011786) tmem110l (ENSTRUG00000011728) ITIH5 (ENSTRUG00000011222) itih2 (ENSTRUG00000010807) kin (ENSTRUG00000010720) atp5f1c (ENSTRUG00000010586) gata3 (ENSTRUG00000010450) celf2 (ENSTRUG00000010147) usp6nl (ENSTRUG00000025157) kcnj8 (ENSTRUG00000009953) Eupecaria_A ANCESTRAL SPECIES 21 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00940000157779 ENSGT00390000013550 ENSGT00390000010221 ENSGT00940000155083.b.a.b ENSGT00390000018424 ENSGT01010000222336.b.a.b.a ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00910000145367 ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Ballan wrasse MODERN SPECIES 730 ENSLBEG00000004476 ENSLBEG00000004527 ENSLBEG00000004583 ssbp1 (ENSLBEG00000004650) #22 creb3l2 (ENSLBEG00000004689) ENSLBEG00000004758 ENSLBEG00000004914 Eupecaria_B ANCESTRAL SPECIES 21 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00940000157779 ENSGT00390000013550 ENSGT00390000010221 ENSGT00940000155083.b.a.b ENSGT00390000018424 ENSGT01010000222336.b.a.b.a ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00910000145367 ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Eupecaria_C ANCESTRAL SPECIES 18 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00940000157779 ENSGT00390000013550 ENSGT00390000010221 ENSGT00940000155083.b.a.b ENSGT00390000018424 ENSGT01010000222336.b.a.b.a ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Eupercaria_incertae_sedis ANCESTRAL SPECIES 22 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00940000157779 ENSGT00390000013550 ENSGT00390000010221 ENSGT00390000018424 ENSGT01010000222336.b.a.b.a ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00910000145367 ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Large yellow croaker MODERN SPECIES 491 ppfia2 (ENSLCRG00005018255) ENSLCRG00005019228 foxm1 (ENSLCRG00005019230) rhno1 (ENSLCRG00005019231) TULP3 (ENSLCRG00005019232) ENSLCRG00005019233 ENSLCRG00005019241 eri1 (ENSLCRG00005019243) dclre1c (ENSLCRG00005019246) meig1 (ENSLCRG00005019249) tmem243b (ENSLCRG00005010956) ENSLCRG00005010957 ENSLCRG00005010958 ENSLCRG00005010959 acot14 (ENSLCRG00005010960) ssbp1 (ENSLCRG00005010966) #22 creb3l2 (ENSLCRG00005010970) ENSLCRG00005010986 ENSLCRG00005011308 RASSF3 (ENSLCRG00005011311) zgc:194209 (ENSLCRG00005011315) gnsa (ENSLCRG00005011348) TBC1D30 (ENSLCRG00005013499) prkcq (ENSLCRG00005013511) SFMBT2 (ENSLCRG00005013572) tmem110l (ENSLCRG00005013578) ITIH5 (ENSLCRG00005013580) itih2 (ENSLCRG00005013585) kin (ENSLCRG00005013649) atp5f1c (ENSLCRG00005013666) atp5f1c (ENSLCRG00005013675) European seabass MODERN SPECIES 12 socs2 (ENSDLAG00005027365) ncaph2 (ENSDLAG00005014061) sco2 (ENSDLAG00005003872) ENSDLAG00005027766 ENSDLAG00005014174 kcnd2 (ENSDLAG00005011187) tspan12 (ENSDLAG00005031559) ing3 (ENSDLAG00005007310) CPED1 (ENSDLAG00005032049) ENSDLAG00005033048 stab2 (ENSDLAG00005003809) ENSDLAG00005003686 ENSDLAG00005034901 ENSDLAG00005028118 ENSDLAG00005021542 ssbp1 (ENSDLAG00005033320) #22 creb3l2 (ENSDLAG00005021521) ENSDLAG00005019339 RASSF3 (ENSDLAG00005027471) gnsa (ENSDLAG00005006844) TBC1D30 (ENSDLAG00005007309) ENSDLAG00005007512 ENSDLAG00005008158 ENSDLAG00005030274 ENSDLAG00005034249 PTPRR (ENSDLAG00005002330) PTPRB (ENSDLAG00005002586) KCNMB4 (ENSDLAG00005032402) CNOT2 (ENSDLAG00005004306) ENSDLAG00005035054 ENSDLAG00005028954 Gilthead seabream MODERN SPECIES 5 usp44 (ENSSAUG00010018152) metap2b (ENSSAUG00010018160) vezt (ENSSAUG00010018239) fgd6 (ENSSAUG00010018251) NDUFA12 (ENSSAUG00010018631) TMCC3 (ENSSAUG00010018634) ENSSAUG00010018635 eri1 (ENSSAUG00010018637) LAMB1 (ENSSAUG00010018699) dclre1c (ENSSAUG00010019348) meig1 (ENSSAUG00010019354) tmem243b (ENSSAUG00010019355) CD9 (ENSSAUG00010019356) ENSSAUG00010019357 acot18 (ENSSAUG00010019359) ssbp1 (ENSSAUG00010019362) #22 creb3l2 (ENSSAUG00010019363) ENSSAUG00010019366 ENSSAUG00010019916 RASSF3 (ENSSAUG00010019919) zgc:194209 (ENSSAUG00010019920) gnsa (ENSSAUG00010019933) TBC1D30 (ENSSAUG00010020117) ENSSAUG00010020309 prkcq (ENSSAUG00010020355) ENSSAUG00010022513 tmem110l (ENSSAUG00010022584) ITIH5 (ENSSAUG00010022587) itih2 (ENSSAUG00010022594) kin (ENSSAUG00010022665) ATP5C1 (ENSSAUG00010022681) Perciformes ANCESTRAL SPECIES 18 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00940000157779 ENSGT00390000013550 ENSGT00390000010221 ENSGT00940000155083.b.a.b ENSGT00390000018424 ENSGT01010000222336.b.a.b.a ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00910000145367 ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Perciformes_a ANCESTRAL SPECIES 19 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00940000157779 ENSGT00390000013550 ENSGT00390000010221 ENSGT00940000155083.b.a.b ENSGT00390000018424 ENSGT01010000222336.b.a.b.a ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00910000145367 ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000159247 Pike perch MODERN SPECIES 28 fgd6 (ENSSLUG00000007421) ndufa12 (ENSSLUG00000007433) TMCC3 (ENSSLUG00000007441) eri1 (ENSSLUG00000007448) ENSSLUG00000007537 dclre1c (ENSSLUG00000008478) meig1 (ENSSLUG00000008544) tmem243b (ENSSLUG00000008550) ENSSLUG00000008556 CD9 (ENSSLUG00000008562) ENSSLUG00000008574 ENSSLUG00000008592 ENSSLUG00000008706 ENSSLUG00000008742 ENSSLUG00000008747 ssbp1 (ENSSLUG00000008750) #22 creb3l2 (ENSSLUG00000008765) ENSSLUG00000008939 ENSSLUG00000013442 RASSF3 (ENSSLUG00000013448) zgc:194209 (ENSSLUG00000013459) gnsa (ENSSLUG00000013490) TBC1D30 (ENSSLUG00000013721) prkcq (ENSSLUG00000013846) Channel bull blenny MODERN SPECIES 15 itfg2 (ENSCGOG00000022503) ascl1a (ENSCGOG00000022495) pah (ENSCGOG00000021599) th2 (ENSCGOG00000021420) nup37 (ENSCGOG00000021365) parpbp (ENSCGOG00000021360) pmch (ENSCGOG00000021359) igf1 (ENSCGOG00000021110) ENSCGOG00000021090 btbd11a (ENSCGOG00000020950) MTERF2 (ENSCGOG00000020933) CD9 (ENSCGOG00000020917) ENSCGOG00000020908 acot14 (ENSCGOG00000020865) ENSCGOG00000020863 ssbp1 (ENSCGOG00000020859) #22 creb3l2 (ENSCGOG00000020856) ENSCGOG00000018998 ENSCGOG00000018962 RASSF3 (ENSCGOG00000018958) zgc:194209 (ENSCGOG00000018955) gnsa (ENSCGOG00000018524) TBC1D30 (ENSCGOG00000018496) prkcq (ENSCGOG00000016167) SFMBT2 (ENSCGOG00000016039) tmem110l (ENSCGOG00000016032) ITIH5 (ENSCGOG00000016017) itih2 (ENSCGOG00000015963) kin (ENSCGOG00000015866) atp5f1c (ENSCGOG00000015708) gata3 (ENSCGOG00000015657) Cottioidei ANCESTRAL SPECIES 19 ENSGT00940000156615.a ENSGT00940000160526 ENSGT00940000155016 ENSGT00390000003290 ENSGT00940000156334.a.b ENSGT00390000005848 ENSGT00940000157275.a ENSGT00530000063205.B ENSGT00940000156003.l.b ENSGT00940000157779 ENSGT00390000013550 ENSGT00390000010221 ENSGT00940000155083.b.a.b ENSGT00390000018424 ENSGT01010000222336.b.a.b.a ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00910000145367 ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 ENSGT00940000157638 ENSGT00940000158123 ENSGT00940000153920.a.a ENSGT00940000158317 ENSGT00940000157945 ENSGT00390000005903 ENSGT00390000006837 ENSGT00940000155461.A Lumpfish MODERN SPECIES 15 ENSCLMG00005015220 PTPRR (ENSCLMG00005014671) ENSCLMG00005014658 rab21 (ENSCLMG00005014655) ENSCLMG00005014652 MYRFL (ENSCLMG00005014646) cct2 (ENSCLMG00005014630) nots (ENSCLMG00005014386) ENSCLMG00005014381 ENSCLMG00005014379 dclre1c (ENSCLMG00005014351) meig1 (ENSCLMG00005014344) tmem243b (ENSCLMG00005014343) CD9 (ENSCLMG00005014342) acot15 (ENSCLMG00005014296) ssbp1 (ENSCLMG00005014295) #22 creb3l2 (ENSCLMG00005014294) ENSCLMG00005014289 ENSCLMG00005014287 ENSCLMG00005014286 SFMBT2 (ENSCLMG00005014257) ENSCLMG00005014250 ENSCLMG00005014248 ENSCLMG00005014247 celf2 (ENSCLMG00005014242) ENSCLMG00005014238 usp6nl (ENSCLMG00005013664) ECHDC3 (ENSCLMG00005013662) kcnj8 (ENSCLMG00005013661) abcc9 (ENSCLMG00005012703) nup107 (ENSCLMG00005011707) Stickleback MODERN SPECIES 3 ntn4 (ENSGACG00000020056) usp44 (ENSGACG00000020058) metap2b (ENSGACG00000020059) vezt (ENSGACG00000020060) ENSGACG00000020064 fgd6 (ENSGACG00000020065) ENSGACG00000020067 eri1 (ENSGACG00000020068) ENSGACG00000020070 dclre1c (ENSGACG00000020073) meig1 (ENSGACG00000020074) tmem243b (ENSGACG00000020075) CD9 (ENSGACG00000020076) ENSGACG00000020079 acot15 (ENSGACG00000020080) ssbp1 (ENSGACG00000020081) #22 creb3l2 (ENSGACG00000020083) ENSGACG00000020085 ENSGACG00000020087 RASSF3 (ENSGACG00000020089) zgc:194209 (ENSGACG00000020090) gnsa (ENSGACG00000020091) TBC1D30 (ENSGACG00000020092) ENSGACG00000020093 prkcq (ENSGACG00000020094) SFMBT2 (ENSGACG00000020098) tmem110l (ENSGACG00000020100) ITIH5 (ENSGACG00000020102) itih2 (ENSGACG00000020104) kin (ENSGACG00000020107) atp5f1c (ENSGACG00000020109) Tiger tail seahorse MODERN SPECIES 433 th2 (ENSHCOG00000018465) pah (ENSHCOG00000018488) ascl1a (ENSHCOG00000018503) ENSHCOG00000018511 itfg2 (ENSHCOG00000018527) ENSHCOG00000018560 elapor2b (ENSHCOG00000018591) tspan9b (ENSHCOG00000018619) amdhd1 (ENSHCOG00000018637) ENSHCOG00000018663 ntn4 (ENSHCOG00000018712) TMCC3 (ENSHCOG00000018827) ENSHCOG00000018855 eri1 (ENSHCOG00000018865) ENSHCOG00000018888 ssbp1 (ENSHCOG00000018912) #22 creb3l2 (ENSHCOG00000019029) DGKI (ENSHCOG00000019145) Pinecone sodierfish MODERN SPECIES 15 nrip2 (ENSMMDG00005018750) klhl42 (ENSMMDG00005018749) elapor2b (ENSMMDG00005018739) tspan9b (ENSMMDG00005018735) amdhd1 (ENSMMDG00005018734) snrpf (ENSMMDG00005018733) ntn4 (ENSMMDG00005018731) usp44 (ENSMMDG00005018730) METAP2 (ENSMMDG00005018690) vezt (ENSMMDG00005018685) fgd6 (ENSMMDG00005018460) ndufa12 (ENSMMDG00005018449) TMCC3 (ENSMMDG00005018447) eri1 (ENSMMDG00005018444) LAMB1 (ENSMMDG00005017795) ssbp1 (ENSMMDG00005017763) #22 creb3l2 (ENSMMDG00005017758) ENSMMDG00005017754 ENSMMDG00005017752 RASSF3 (ENSMMDG00005017750) zgc:194209 (ENSMMDG00005017747) gnsa (ENSMMDG00005017287) prkcq (ENSMMDG00005017277) SFMBT2 (ENSMMDG00005017192) tmem110l (ENSMMDG00005017173) ITIH5 (ENSMMDG00005017164) itih2 (ENSMMDG00005017156) kin (ENSMMDG00005017143) atp5f1c (ENSMMDG00005017078) gata3 (ENSMMDG00005017072) celf2 (ENSMMDG00005014675) Cod MODERN SPECIES 10 ENSGMOG00000005557 ENSGMOG00000005540 ENSGMOG00000030972 celf2 (ENSGMOG00000008983) atp5f1c (ENSGMOG00000003527) kin (ENSGMOG00000003481) itih2 (ENSGMOG00000003428) ITIH5 (ENSGMOG00000001052) tmem110l (ENSGMOG00000001029) SFMBT2 (ENSGMOG00000000993) prkcq (ENSGMOG00000000969) ENSGMOG00000029566 ENSGMOG00000000904 ENSGMOG00000000933 ENSGMOG00000027672 ssbp1 (ENSGMOG00000010431) #22 creb3l2 (ENSGMOG00000010438) ENSGMOG00000017041 spic (ENSGMOG00000026118) ENSGMOG00000028353 mybpc1 (ENSGMOG00000003722) chpt1 (ENSGMOG00000003696) gnptab (ENSGMOG00000003643) ENSGMOG00000003456 ENSGMOG00000028185 ENSGMOG00000009214 phyh (ENSGMOG00000009230) UCMA (ENSGMOG00000030838) mcm10 (ENSGMOG00000009246) OPTN (ENSGMOG00000009270) ENSGMOG00000002588 Protacanthopterygii ANCESTRAL SPECIES 52 ENSGT00390000011239.j ENSGT00940000155529.B ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ENSGT00940000166253 ENSGT00390000018424 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000155659 ENSGT00940000160513.a ENSGT01030000234588.b.b.b.a.a.b.b ENSGT00940000153901.a.a.b ENSGT00940000154709.a.b.b.d ENSGT00940000155504.k.b ENSGT00940000156246.c.b ENSGT00940000165554 ENSGT00940000159918.a.a ENSGT00940000177041 ENSGT00940000162902 ENSGT00940000156443 ENSGT00390000013963 Northern pike MODERN SPECIES 22 ENSELUG00000017459 GRM8 (ENSELUG00000017430) ENSELUG00000000656 SYPL1 (ENSELUG00000032755) NAMPT (ENSELUG00000017244) pik3cg (ENSELUG00000017187) ENSELUG00000017091 PRKAR2B (ENSELUG00000017069) HBP1 (ENSELUG00000017031) ENSELUG00000033637 ENSELUG00000016969 coa6 (ENSELUG00000016866) slc13a4 (ENSELUG00000016831) zgc:162331 (ENSELUG00000016748) ENSELUG00000016678 ssbp1 (ENSELUG00000016596) #22 creb3l2 (ENSELUG00000016552) ENSELUG00000016463 dock4b (ENSELUG00000016080) ENSELUG00000028344 LRRN3 (ENSELUG00000015687) ENSELUG00000015677 tnnt2e (ENSELUG00000027376) dnm1l (ENSELUG00000015446) dnajb9b (ENSELUG00000015371) ENSELUG00000015356 ENSELUG00000015332 ENSELUG00000015310 ASCL4 (ENSELUG00000015293) prdm4 (ENSELUG00000015265) akr1b1.2 (ENSELUG00000015187) Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00390000002796.hb #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00390000002796.hb #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00390000002796.hb #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00390000002796.hb #22 Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 2016 ENSOTSG00005017991 #22 Chinook salmon MODERN SPECIES 2268 ENSOTSG00005020077 #22 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 468 ENSGT00940000156858.b ENSGT00390000002417 ENSGT00940000158160.j.a ENSGT00390000011239.j.a ENSGT00940000155529.B.c ENSGT00390000004094.i ENSGT01030000234550.a.a.d.a.b.d ENSGT00940000166253.e ENSGT00390000018424 ENSGT00390000002796.ib.a #22 ENSGT00940000157659.d ENSGT00940000158094.eb ENSGT00940000155659.e.b ENSGT00940000155659.e.a.b ENSGT00940000160513.a.c ENSGT01030000234588.b.b.b.a.a.b.b.a.a ENSGT00940000153901.a.a.b.c.a ENSGT00940000154709.a.b.b.d.h.a.b ENSGT00940000155504.k.b.a ENSGT00940000156246.c.b.c ENSGT00940000165554.b ENSGT00940000159918.a.a.c Huchen MODERN SPECIES 2761 ENSHHUG00000001488 ENSHHUG00000001444 ssbp1 (ENSHHUG00000001403) #22 creb3l2 (ENSHHUG00000001344) ENSHHUG00000001103 Salmoninae_a ANCESTRAL SPECIES 11 ENSGT00940000156567.a.a.k ENSGT00730000110895.b.a.o.a.c.a ENSGT01030000234648.a.b.a.a.b.cb.b.s.a ENSGT00390000008140.i.a ENSGT00940000158612.i ENSGT01030000234637.a.b.p ENSGT00940000153456.b.a.bb.a.a ENSGT00940000156858.b ENSGT00940000158160.j.a ENSGT00390000011239.j.a ENSGT00940000155529.B.c ENSGT00390000004094.i ENSGT01030000234550.a.a.d.a.b.d ENSGT00940000166253.e ENSGT00390000018424 ENSGT00390000002796.ib.a #22 ENSGT00940000157659.d ENSGT00940000158094.eb ENSGT00940000155659.e.a.b ENSGT00940000155659.e.b ENSGT00940000160513.a.c ENSGT01030000234588.b.b.b.a.a.b.b.a.a ENSGT00940000153901.a.a.b.c.a ENSGT00940000154709.a.b.b.d.h.a.b ENSGT00940000155504.k.b.a ENSGT00940000156246.c.b.c ENSGT00940000165554.b ENSGT00940000159918.a.a.c ENSGT00940000162902.l.b ENSGT00940000156443.r ENSGT00390000013963.j Salmo ANCESTRAL SPECIES 46 ENSGT00940000163911.a.b ENSGT01030000234648.a.b.a.a.b.cb.b.s.a ENSGT00390000008140.i.a ENSGT00940000158612.i ENSGT00940000177490 ENSGT01030000234637.a.b.p ENSGT00940000153456.b.a.bb.b ENSGT00940000156858.b ENSGT00940000158160.j.a ENSGT00390000011239.j.a ENSGT00940000155529.B.c ENSGT00390000004094.i ENSGT01030000234550.a.a.d.a.b.d ENSGT00940000166253.e ENSGT00390000018424 ENSGT00390000002796.ib.a #22 ENSGT00940000157659.d ENSGT00940000158094.eb ENSGT00940000155659.e.a.b ENSGT00940000160513.a.c ENSGT01030000234588.b.b.b.a.a.b.b.a.a ENSGT00940000153901.a.a.b.c.b ENSGT00940000154709.a.b.b.d.g.b ENSGT00940000155504.k.b.a ENSGT00940000156246.c.b.c ENSGT00940000165554.b ENSGT00940000159918.a.a.c ENSGT00940000162902.l.b ENSGT00940000156443.r ENSGT00390000013963.j ENSGT00950000182981.b.f.a.c.a.c.b Atlantic salmon MODERN SPECIES 8 ENSSSAG00000095575 GRM8 (ENSSSAG00000074033) ENSSSAG00000074016 ENSSSAG00000074010 ENSSSAG00000074009 SYPL1 (ENSSSAG00000059353) NAMPT (ENSSSAG00000073927) pik3cg (ENSSSAG00000073601) PRKAR2B (ENSSSAG00000073587) HBP1 (ENSSSAG00000073585) ENSSSAG00000073419 CA031 (ENSSSAG00000073369) slc13a4 (ENSSSAG00000073127) ENSSSAG00000111136 ENSSSAG00000073114 ssbp1 (ENSSSAG00000073105) #22 creb3l2 (ENSSSAG00000073100) ENSSSAG00000072954 ENSSSAG00000098935 LRRN3 (ENSSSAG00000119001) tnni1 (ENSSSAG00000081743) ENSSSAG00000108118 ENSSSAG00000059652 ENSSSAG00000059482 ENSSSAG00000059444 ENSSSAG00000059432 ENSSSAG00000059346 CDN1C (ENSSSAG00000059313) ENSSSAG00000059303 ENSSSAG00000059239 tmem209 (ENSSSAG00000115201) River trout MODERN SPECIES 34 GRM8 (ENSSTUG00000049362) znf800a (ENSSTUG00000049521) ATXN7L1 (ENSSTUG00000049536) ENSSTUG00000049541 SYPL1 (ENSSTUG00000049543) NAMPT (ENSSTUG00000039504) pik3cg (ENSSTUG00000039769) ENSSTUG00000039915 PRKAR2B (ENSSTUG00000039919) HBP1 (ENSSTUG00000040042) ENSSTUG00000040106 coa6 (ENSSTUG00000041120) slc13a4 (ENSSTUG00000041180) ENSSTUG00000042335 ENSSTUG00000042344 ssbp1 (ENSSTUG00000042372) #22 creb3l2 (ENSSTUG00000042466) ENSSTUG00000042948 dock4b (ENSSTUG00000047435) ENSSTUG00000047782 LRRN3 (ENSSTUG00000047787) ENSSTUG00000047793 ENSSTUG00000047809 tnnt2e (ENSSTUG00000047879) dnm1l (ENSSTUG00000047897) DNAJB9 (ENSSTUG00000047922) ENSSTUG00000047931 ENSSTUG00000047956 ASCL4 (ENSSTUG00000047971) prdm4 (ENSSTUG00000047976) tmem209 (ENSSTUG00000048019) Oncorhynchus ANCESTRAL SPECIES 22 ENSGT00940000163911.a.b ENSGT01030000234648.a.b.a.a.b.cb.b.s.a ENSGT00390000008140.i.a ENSGT00940000158612.i ENSGT01030000234637.a.b.p ENSGT00940000153456.b.a.bb.a.a ENSGT00940000156858.b ENSGT00390000002417 ENSGT00940000158160.j.a ENSGT00390000011239.j.b.b ENSGT00940000155529.B.c ENSGT00390000004094.i ENSGT01030000234550.a.a.d.a.b.d ENSGT00940000166253.e ENSGT00390000018424 ENSGT00390000002796.ib.a #22 ENSGT00940000157659.d ENSGT00940000158094.eb ENSGT00940000155659.e.b ENSGT00940000160513.a.c ENSGT01030000234588.b.b.b.a.a.b.b.a.a ENSGT00940000153901.a.a.b.c.a ENSGT00940000154709.a.b.b.d.h.a.b ENSGT00940000155504.k.b.a ENSGT00940000156246.c.b.c ENSGT00940000165554.b ENSGT00940000159918.a.a.c ENSGT00940000162902.l.b ENSGT00940000156443.r ENSGT00390000013963.j ENSGT00950000182981.b.f.a.c.a.c.b Oncorhynchus_a ANCESTRAL SPECIES 31 ENSGT00940000163911.a.b ENSGT01030000234648.a.b.a.a.b.cb.b.s.a ENSGT00390000008140.i.a ENSGT00940000158612.i ENSGT01030000234637.a.b.p ENSGT00940000153456.b.a.bb.a.a ENSGT00940000156858.b ENSGT00390000002417 ENSGT00940000158160.j.a ENSGT00390000011239.j.b.b ENSGT00940000155529.B.c ENSGT00390000004094.i ENSGT01030000234550.a.a.d.a.b.d ENSGT00940000166253.e ENSGT00390000018424 ENSGT00390000002796.ib.a #22 ENSGT00940000157659.d ENSGT00940000158094.eb ENSGT00940000155659.e.b ENSGT00940000160513.a.c ENSGT01030000234588.b.b.b.a.a.b.b.a.a ENSGT00940000153901.a.a.b.c.a ENSGT00940000154709.a.b.b.d.h.a.b ENSGT00940000155504.k.b.a ENSGT00940000156246.c.b.c ENSGT00940000165554.b ENSGT00940000159918.a.a.c ENSGT00940000162902.l.b ENSGT00940000156443.r ENSGT00390000013963.j ENSGT00950000182981.b.f.a.c.a.c.b Chinook salmon MODERN SPECIES 8 ENSOTSG00005029321 GRM8 (ENSOTSG00005029318) znf800a (ENSOTSG00005029316) ATXN7L1 (ENSOTSG00005029315) SYPL1 (ENSOTSG00005029314) NAMPT (ENSOTSG00005027911) pik3cg (ENSOTSG00005027750) ENSOTSG00005027749 PRKAR2B (ENSOTSG00005027747) HBP1 (ENSOTSG00005027746) ENSOTSG00005027744 ENSOTSG00005027742 slc13a4 (ENSOTSG00005026954) ENSOTSG00005026941 ENSOTSG00005026938 ssbp1 (ENSOTSG00005026937) #22 creb3l2 (ENSOTSG00005026934) ENSOTSG00005026932 ENSOTSG00005026931 dock4b (ENSOTSG00005009077) LRRN3 (ENSOTSG00005009057) ENSOTSG00005009056 ENSOTSG00005009054 tnnt2e (ENSOTSG00005009052) dnm1l (ENSOTSG00005009045) DNAJB9 (ENSOTSG00005009044) ENSOTSG00005009027 ENSOTSG00005009023 ASCL4 (ENSOTSG00005009020) prdm4 (ENSOTSG00005009015) tmem209 (ENSOTSG00005008725) Coho salmon MODERN SPECIES 10 ENSOKIG00005025412 GRM8 (ENSOKIG00005025521) znf800a (ENSOKIG00005026570) ATXN7L1 (ENSOKIG00005026583) SYPL1 (ENSOKIG00005026607) NAMPT (ENSOKIG00005026646) pik3cg (ENSOKIG00005026920) ENSOKIG00005027058 PRKAR2B (ENSOKIG00005027080) HBP1 (ENSOKIG00005027101) ENSOKIG00005027211 coa6 (ENSOKIG00005027830) slc13a4 (ENSOKIG00005027925) ENSOKIG00005028937 ENSOKIG00005028948 ssbp1 (ENSOKIG00005028968) #22 creb3l2 (ENSOKIG00005028990) ENSOKIG00005029185 dock4b (ENSOKIG00005031585) LRRN3 (ENSOKIG00005038963) ENSOKIG00005038977 ENSOKIG00005039009 tnnt2e (ENSOKIG00005039031) DNM1L (ENSOKIG00005039154) ENSOKIG00005039311 ENSOKIG00005039335 ENSOKIG00005039425 ENSOKIG00005039456 ENSOKIG00005039471 PRDM4 (ENSOKIG00005039497) tmem209 (ENSOKIG00005039611) Rainbow trout MODERN SPECIES 6 ENSOMYG00000042673 GRM8 (ENSOMYG00000058178) ENSOMYG00000042660 ATXN7L1 (ENSOMYG00000042651) SYPL1 (ENSOMYG00000042646) NAMPT (ENSOMYG00000042504) pik3cg (ENSOMYG00000042114) ENSOMYG00000042063 PRKAR2B (ENSOMYG00000042055) HBP1 (ENSOMYG00000041943) ENSOMYG00000041928 coa6 (ENSOMYG00000041922) slc13a4 (ENSOMYG00000041597) ENSOMYG00000041576 ENSOMYG00000041571 ssbp1 (ENSOMYG00000041550) #22 creb3l2 (ENSOMYG00000041524) ENSOMYG00000041269 ENSOMYG00000051967 dock4b (ENSOMYG00000040012) LRRN3 (ENSOMYG00000039349) ENSOMYG00000039330 ENSOMYG00000039309 tnnt2e (ENSOMYG00000039291) ENSOMYG00000057640 ENSOMYG00000036710 ENSOMYG00000036426 ENSOMYG00000036409 ENSOMYG00000036385 ENSOMYG00000036369 tmem209 (ENSOMYG00000035038) Salmoninae ANCESTRAL SPECIES 1113 ENSGT00390000002796.ib.b #22 ENSGT00940000157659.c ENSGT00940000158094.db ENSGT00940000155659.f Salmoninae_a ANCESTRAL SPECIES 20 ENSGT01100000263518.B.b.b.b.g ENSGT01030000234648.a.b.a.a.b.cb.b.s.b ENSGT00390000008140.i.b ENSGT00940000158612.j ENSGT00940000177490 ENSGT01030000234637.a.b.o ENSGT00940000153456.b.a.bb.a.b ENSGT00940000156858.a ENSGT00390000002417 ENSGT00940000158160.j.b ENSGT00390000011239.j.b ENSGT00940000155529.B.d.a.b ENSGT00390000004094.j ENSGT01030000234550.a.a.d.a.b.c ENSGT00940000166253.f ENSGT00390000002796.ib.b #22 ENSGT00940000157659.c ENSGT00940000158094.db ENSGT00940000155659.f ENSGT00940000155659.e.a.a ENSGT00940000160513.a.d ENSGT01030000234588.b.b.b.a.a.b.b.a.b ENSGT00940000153901.a.a.b.c.b ENSGT00940000154709.a.b.b.d.h.a.a ENSGT00940000155504.k.b.b ENSGT00940000156246.c.b.d ENSGT00940000165554.a ENSGT00940000159918.a.a.d ENSGT00940000177041 ENSGT00940000162902.l.a ENSGT00940000156443.q Oncorhynchus ANCESTRAL SPECIES 9 ENSGT00390000010899.a.b.b.b.l ENSGT01100000263518.B.b.b.b.g.a ENSGT01030000234648.a.b.a.a.b.cb.b.s.b ENSGT00390000008140.i.b ENSGT00940000158612.j ENSGT00940000177490 ENSGT01030000234637.a.b.o ENSGT00940000153456.b.a.bb.a.b ENSGT00940000156858.a ENSGT00940000158160.j.b ENSGT00390000011239.j.b.a ENSGT00940000155529.B.d.a.b ENSGT00390000004094.j ENSGT01030000234550.a.a.d.a.b.c ENSGT00940000166253.f ENSGT00390000002796.ib.b #22 ENSGT00940000157659.c ENSGT00940000158094.db ENSGT00940000155659.f ENSGT00940000160513.a.d ENSGT01030000234588.b.b.b.a.a.b.b.a.b ENSGT00940000153901.a.a.b.c.b ENSGT00940000154709.a.b.b.d.h.a.a ENSGT00940000155504.k.b.b ENSGT00940000156246.c.b.d ENSGT00940000165554.a ENSGT00940000159918.a.a.d ENSGT00940000162902.l.a ENSGT00940000156443.q ENSGT00390000013963.i ENSGT00950000182981.b.f.a.c.a.c.a Oncorhynchus_a ANCESTRAL SPECIES 16 ENSGT00390000010899.a.b.b.b.l ENSGT01100000263518.B.b.b.b.g.a ENSGT01030000234648.a.b.a.a.b.cb.b.s.b ENSGT00390000008140.i.b ENSGT00940000158612.j ENSGT00940000177490 ENSGT01030000234637.a.b.o ENSGT00940000153456.b.a.bb.a.b ENSGT00940000156858.a ENSGT00940000158160.j.b ENSGT00390000011239.j.b.a ENSGT00940000155529.B.d.a.b ENSGT00390000004094.j ENSGT01030000234550.a.a.d.a.b.c ENSGT00940000166253.f ENSGT00390000002796.ib.b #22 ENSGT00940000157659.c ENSGT00940000158094.db ENSGT00940000155659.f ENSGT00940000160513.a.d ENSGT01030000234588.b.b.b.a.a.b.b.a.b ENSGT00940000153901.a.a.b.c.b ENSGT00940000154709.a.b.b.d.h.a.a ENSGT00940000155504.k.b.b ENSGT00940000156246.c.b.d ENSGT00940000165554.a ENSGT00940000159918.a.a.d ENSGT00940000162902.l.a ENSGT00940000156443.q ENSGT00390000013963.i ENSGT00950000182981.b.f.a.c.a.c.a Chinook salmon MODERN SPECIES 6 WASL (ENSOTSG00005016483) TMEM229A (ENSOTSG00005016549) gpr37b (ENSOTSG00005016551) GRM8 (ENSOTSG00005016553) znf800a (ENSOTSG00005016555) ATXN7L1 (ENSOTSG00005016557) SYPL1 (ENSOTSG00005016558) NAMPT (ENSOTSG00005016560) pik3cg (ENSOTSG00005016600) PRKAR2B (ENSOTSG00005017076) HBP1 (ENSOTSG00005017099) ENSOTSG00005017105 coa6 (ENSOTSG00005017107) slc13a4 (ENSOTSG00005017112) ENSOTSG00005018105 ssbp1 (ENSOTSG00005018106) #22 creb3l2 (ENSOTSG00005018108) ENSOTSG00005018114 dock4b (ENSOTSG00005018274) ENSOTSG00005030535 LRRN3 (ENSOTSG00005030537) ENSOTSG00005030538 ENSOTSG00005030539 tnnt2e (ENSOTSG00005030547) dnm1l (ENSOTSG00005030548) dnajb9b (ENSOTSG00005030795) ENSOTSG00005030797 ASCL4 (ENSOTSG00005001631) prdm4 (ENSOTSG00005001809) tmem209 (ENSOTSG00005001868) ENSOTSG00005004282 Coho salmon MODERN SPECIES 29 gpr37b (ENSOKIG00005017137) GRM8 (ENSOKIG00005017194) ZNF800 (ENSOKIG00005018265) ATXN7L1 (ENSOKIG00005018278) ENSOKIG00005001837 SYPL1 (ENSOKIG00005001845) NAMPT (ENSOKIG00005001911) pik3cg (ENSOKIG00005002076) PRKAR2B (ENSOKIG00005002519) HBP1 (ENSOKIG00005002563) ENSOKIG00005002589 ENSOKIG00005002668 coa6 (ENSOKIG00005003187) slc13a4 (ENSOKIG00005003245) ENSOKIG00005003638 ssbp1 (ENSOKIG00005003642) #22 creb3l2 (ENSOKIG00005003650) ENSOKIG00005003879 dock4b (ENSOKIG00005008084) ENSOKIG00005008820 LRRN3 (ENSOKIG00005008839) ENSOKIG00005008847 ENSOKIG00005008884 tnnt2e (ENSOKIG00005008958) DNM1L (ENSOKIG00005009036) dnajb9b (ENSOKIG00005009225) ENSOKIG00005009240 ENSOKIG00005009295 ASCL4 (ENSOKIG00005009312) prdm4 (ENSOKIG00005009316) tmem209 (ENSOKIG00005009344) Rainbow trout MODERN SPECIES 13 ENSOMYG00000044691 gpr37b (ENSOMYG00000044695) GRM8 (ENSOMYG00000044731) ZNF800 (ENSOMYG00000045068) ATXN7L1 (ENSOMYG00000045071) ENSOMYG00000045073 SYPL1 (ENSOMYG00000045076) NAMPT (ENSOMYG00000045093) pik3cg (ENSOMYG00000045201) PRKAR2B (ENSOMYG00000045266) HBP1 (ENSOMYG00000045282) ENSOMYG00000045285 cin (ENSOMYG00000045303) slc13a4 (ENSOMYG00000045311) ENSOMYG00000062020 ssbp1 (ENSOMYG00000045332) #22 creb3l2 (ENSOMYG00000045344) ENSOMYG00000045396 dock4b (ENSOMYG00000045919) ENSOMYG00000077788 LRRN3 (ENSOMYG00000046860) ENSOMYG00000064458 ENSOMYG00000046868 ENSOMYG00000061383 ENSOMYG00000046875 tnnt2e (ENSOMYG00000046883) ENSOMYG00000046956 ENSOMYG00000005634 ENSOMYG00000005672 ENSOMYG00000005704 ENSOMYG00000005712 Salmo ANCESTRAL SPECIES 25 ENSGT00390000010899.a.b.b.b.l ENSGT01100000263518.B.b.b.b.h.a ENSGT01030000234648.a.b.a.a.b.cb.b.s.b ENSGT00390000008140.i.b ENSGT00940000158612.j ENSGT01030000234637.a.b.o ENSGT00940000153456.b.a.bb.a.b ENSGT00940000156858.a ENSGT00940000158160.j.b ENSGT00390000002417 ENSGT00390000011239.j.b ENSGT00940000155529.B.d.b ENSGT00390000004094.j ENSGT01030000234550.a.a.d.a.b.c ENSGT00940000166253.f ENSGT00390000002796.ib.b #22 ENSGT00940000157659.c ENSGT00940000158094.db ENSGT00940000155659.e.a.a ENSGT00940000160513.a.d ENSGT01030000234588.b.b.b.a.a.b.b.a.b ENSGT00940000153901.a.a.b.d ENSGT00940000154709.a.b.b.d.g.a ENSGT00940000155504.k.b.b ENSGT00940000156246.c.b.d ENSGT00940000165554.a ENSGT00940000159918.a.a.d ENSGT00940000177041 ENSGT00940000162902.l.a ENSGT00940000156443.q ENSGT00390000013963.i River trout MODERN SPECIES 38 gpr37b (ENSSTUG00000027421) GRM8 (ENSSTUG00000026735) znf800a (ENSSTUG00000026713) ATXN7L1 (ENSSTUG00000026688) ENSSTUG00000026709 SYPL1 (ENSSTUG00000026675) NAMPT (ENSSTUG00000024831) pik3cg (ENSSTUG00000024034) PRKAR2B (ENSSTUG00000023985) HBP1 (ENSSTUG00000023964) ENSSTUG00000023376 coa6 (ENSSTUG00000023358) slc13a4 (ENSSTUG00000022802) ENSSTUG00000022772 ENSSTUG00000022764 ssbp1 (ENSSTUG00000022704) #22 creb3l2 (ENSSTUG00000022617) ENSSTUG00000016676 dock4b (ENSSTUG00000014385) LRRN3 (ENSSTUG00000014319) ENSSTUG00000014311 ENSSTUG00000014262 tnnt2e (ENSSTUG00000014248) dnm1l (ENSSTUG00000014109) dnajb9b (ENSSTUG00000014103) ENSSTUG00000013993 ENSSTUG00000013978 ENSSTUG00000013968 ENSSTUG00000013966 prdm4 (ENSSTUG00000013922) tmem209 (ENSSTUG00000013388) Atlantic salmon MODERN SPECIES 26 GRM8 (ENSSSAG00000059602) ZNF800 (ENSSSAG00000059430) ATXN7L1 (ENSSSAG00000059403) SYPL1 (ENSSSAG00000074006) NAMPT (ENSSSAG00000059174) pik3cg (ENSSSAG00000057322) ENSSSAG00000104552 PRKAR2B (ENSSSAG00000057285) HBP1 (ENSSSAG00000098080) ENSSSAG00000055514 ENSSSAG00000087012 ENSSSAG00000105698 slc13a4 (ENSSSAG00000055377) ENSSSAG00000107921 ENSSSAG00000111577 ssbp1 (ENSSSAG00000055342) #22 cr3l2 (ENSSSAG00000055328) ENSSSAG00000048131 dock4b (ENSSSAG00000089355) LRRN3 (ENSSSAG00000096334) ENSSSAG00000008074 ENSSSAG00000092268 ENSSSAG00000008044 tnnt2 (ENSSSAG00000008019) ENSSSAG00000007989 ENSSSAG00000116748 ENSSSAG00000121101 ENSSSAG00000007718 ENSSSAG00000007714 ENSSSAG00000007709 ENSSSAG00000106805 Huchen MODERN SPECIES 3232 ssbp1 (ENSHHUG00000023637) #22 creb3l2 (ENSHHUG00000023600) ENSHHUG00000022202 Elephant shark MODERN SPECIES 1504 ENSCMIG00000002799 ENSCMIG00000002796 SPOCK3 (ENSCMIG00000002793) tll1 (ENSCMIG00000002507) cpe (ENSCMIG00000002347) sgcd (ENSCMIG00000002333) ZCCHC10 (ENSCMIG00000002326) AFF4 (ENSCMIG00000002302) ENSCMIG00000002284 uqcrq (ENSCMIG00000002275) gdf9 (ENSCMIG00000002270) ENSCMIG00000002267 SOWAHA (ENSCMIG00000002264) septin8a (ENSCMIG00000001191) ENSCMIG00000000879 ssbp1 (ENSCMIG00000000873) #22 ENSCMIG00000000867 ENSCMIG00000000859 GRK6 (ENSCMIG00000000433) EGR1 (ENSCMIG00000000222) paip2 (ENSCMIG00000000193) ENSCMIG00000019881 ENSCMIG00000019878 ENSCMIG00000019869 kazald3 (ENSCMIG00000019866) npm1 (ENSCMIG00000019861) fbxw11a (ENSCMIG00000019851) fgf18b (ENSCMIG00000019847) etf1b (ENSCMIG00000019845) lman2 (ENSCMIG00000019843) arl3l2 (ENSCMIG00000019836) Cyclostomata ANCESTRAL SPECIES 35 ENSGT01030000234550.a.a.d.a.b ENSGT00530000063981 ENSGT00390000002796 #22 ENSGT00940000157659 ENSGT00940000158094 Lamprey MODERN SPECIES 1781 ssbp1 (ENSPMAG00000003576) #22 Hagfish MODERN SPECIES 1520 tmtc2a (ENSEBUG00000004987) mettl25 (ENSEBUG00000004997) ENSEBUG00000005560 ENSEBUG00000011036 #22 ENSEBUG00000008177 ENSEBUG00000006322 ENSEBUG00000011878 ORC4 (ENSEBUG00000007540) ENSEBUG00000016750 ENSEBUG00000011605 ENSEBUG00000002183 ENSEBUG00000007754 ENSEBUG00000007542 ENSEBUG00000000841 ENSEBUG00000013739 ENSEBUG00000009826 ENSEBUG00000001103 ENSEBUG00000013512 rnd3a (ENSEBUG00000015031)