Glires ANCESTRAL SPECIES 18 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401 #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a ENSGT00940000162509.l Rodentia ANCESTRAL SPECIES 12 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401 #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000164718 #26 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163043 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b Rodentia_B ANCESTRAL SPECIES 9 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401 #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000164718 #26 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a Myomorpha ANCESTRAL SPECIES 8 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401 #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000164718 #26 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a Muroidea ANCESTRAL SPECIES 8 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401 #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000164718 #26 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b Upper Galilee mountains blind mole rat MODERN SPECIES 1840 Parp12 (ENSNGAG00000015925) #7 Kdm7a (ENSNGAG00000010381) #8 ENSNGAG00000007888 #9 Rab19 (ENSNGAG00000017844) #10 Mkrn1 (ENSNGAG00000019077) #11 Dennd2a (ENSNGAG00000016156) #12 Adck2 (ENSNGAG00000010919) #13 Ndufb2 (ENSNGAG00000016898) #14 Braf (ENSNGAG00000014000) #15 ENSNGAG00000011360 #16 Mrps33 (ENSNGAG00000014172) #17 ENSNGAG00000021460 #18 Agk (ENSNGAG00000007692) #19 Dennd11 (ENSNGAG00000011955) #20 ENSNGAG00000019527 #21 Ssbp1 (ENSNGAG00000014269) #22 Tas2r137 (ENSNGAG00000016702) #23 Tas2r108 (ENSNGAG00000015066) #24 Prss37 (ENSNGAG00000000102) #25 Or9a7 (ENSNGAG00000017910) #26 Clec5a (ENSNGAG00000017609) #27 Tas2r138 (ENSNGAG00000015138) #28 ENSNGAG00000010341 #29 Muroidea_A ANCESTRAL SPECIES 4 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401 #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000164718 #26 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a Murinae ANCESTRAL SPECIES 4 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401 #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000164718 #26 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a Mus ANCESTRAL SPECIES 20 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401 #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000164718 #26 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a Mus_A ANCESTRAL SPECIES 7 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401.s #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000164718 #26 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a Ryukyu mouse MODERN SPECIES 15 Parp12 (MGP_CAROLIEiJ_G0028242) #7 MGP_CAROLIEiJ_G0028243 #8 MGP_CAROLIEiJ_G0028244 Rab19 (MGP_CAROLIEiJ_G0028245) #10 Mkrn1 (MGP_CAROLIEiJ_G0028246) #11 Dennd2a (MGP_CAROLIEiJ_G0028247) #12 Adck2 (MGP_CAROLIEiJ_G0028248) #13 MGP_CAROLIEiJ_G0028249 #13 Ndufb2 (MGP_CAROLIEiJ_G0028250) #14 Braf (MGP_CAROLIEiJ_G0028251) #15 Mrps33 (MGP_CAROLIEiJ_G0028252) #17 MGP_CAROLIEiJ_G0028253 #18 Agk (MGP_CAROLIEiJ_G0028254) #19 Dennd11 (MGP_CAROLIEiJ_G0028255) #20 Wee2 (MGP_CAROLIEiJ_G0028256) Ssbp1 (MGP_CAROLIEiJ_G0028257) #22 MGP_CAROLIEiJ_G0028258 Tas2r108 (MGP_CAROLIEiJ_G0028259) #24 Prss37 (MGP_CAROLIEiJ_G0028260) #25 Or9a7 (MGP_CAROLIEiJ_G0028261) #26 Or9a4 (MGP_CAROLIEiJ_G0028262) Clec5a (MGP_CAROLIEiJ_G0028263) #27 Tas2r138 (MGP_CAROLIEiJ_G0028264) #28 MGP_CAROLIEiJ_G0028265 #29 Moxd2 (MGP_CAROLIEiJ_G0028266) Trbv1 (MGP_CAROLIEiJ_G0002243) Prss58 (MGP_CAROLIEiJ_G0028267) Prss59 (MGP_CAROLIEiJ_G0028268) MGP_CAROLIEiJ_G0028269 MGP_CAROLIEiJ_G0028270 MGP_CAROLIEiJ_G0028271 Mus_B ANCESTRAL SPECIES 20 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401.s #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000164718 #26 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a Mus_C ANCESTRAL SPECIES 19 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401.s #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ENSGT01050000244883.A.a.a.a.b.k.b spretus MODERN SPECIES 15 Parp12 (MGP_SPRETEiJ_G0029241) #7 Kdm7a (MGP_SPRETEiJ_G0029242) #8 Slc37a3 (MGP_SPRETEiJ_G0029243) Rab19 (MGP_SPRETEiJ_G0029244) #10 Mkrn1 (MGP_SPRETEiJ_G0029245) #11 Dennd2a (MGP_SPRETEiJ_G0029246) #12 Adck2 (MGP_SPRETEiJ_G0029247) #13 MGP_SPRETEiJ_G0029248 #13 Ndufb2 (MGP_SPRETEiJ_G0029249) #14 Braf (MGP_SPRETEiJ_G0029250) #15 Mrps33 (MGP_SPRETEiJ_G0029251) #17 MGP_SPRETEiJ_G0029252 #18 Agk (MGP_SPRETEiJ_G0029253) #19 Dennd11 (MGP_SPRETEiJ_G0029254) #20 Wee2 (MGP_SPRETEiJ_G0029255) Ssbp1 (MGP_SPRETEiJ_G0029256) #22 MGP_SPRETEiJ_G0029257 Tas2r108 (MGP_SPRETEiJ_G0029258) #24 Prss37 (MGP_SPRETEiJ_G0029259) #25 MGP_SPRETEiJ_G0029260 Or9a4 (MGP_SPRETEiJ_G0029261) Clec5a (MGP_SPRETEiJ_G0029262) #27 Tas2r138 (MGP_SPRETEiJ_G0029263) #28 MGP_SPRETEiJ_G0029264 #29 Moxd2 (MGP_SPRETEiJ_G0029265) Trbv1 (MGP_SPRETEiJ_G0002397) Prss58 (MGP_SPRETEiJ_G0029266) Prss59 (MGP_SPRETEiJ_G0029267) MGP_SPRETEiJ_G0029268 MGP_SPRETEiJ_G0029269 MGP_SPRETEiJ_G0029270 Steppe mouse MODERN SPECIES 3159 Parp12 (ENSMSIG00000003821) #7 Kdm7a (ENSMSIG00000003734) #8 Slc37a3 (ENSMSIG00000003657) Rab19 (ENSMSIG00000003633) #10 Mkrn1 (ENSMSIG00000003580) #11 ENSMSIG00000003618 Dennd2a (ENSMSIG00000003496) #12 Adck2 (ENSMSIG00000003366) #13 Ndufb2 (ENSMSIG00000003342) #14 Braf (ENSMSIG00000003138) #15 ENSMSIG00000003115 #17 ENSMSIG00000003101 #18 Agk (ENSMSIG00000003072) #19 Dennd11 (ENSMSIG00000003036) #20 Wee2 (ENSMSIG00000002990) Ssbp1 (ENSMSIG00000002905) #22 Tas2r137 (ENSMSIG00000002897) #23 Tas2r108 (ENSMSIG00000002885) #24 Prss37 (ENSMSIG00000002853) #25 Or9a7 (ENSMSIG00000002837) #26 Clec5a (ENSMSIG00000002705) #27 Tas2r138 (ENSMSIG00000002690) #28 ENSMSIG00000002337 #29 ENSMSIG00000001963 Moxd2 (ENSMSIG00000001914) Trbv1 (ENSMSIG00000001891) Prss59 (ENSMSIG00000001848) ENSMSIG00000001830 Mouse MODERN SPECIES 15 Tbxas1 (ENSMUSG00000029925) Parp12 (ENSMUSG00000038507) #7 Kdm7a (ENSMUSG00000042599) #8 Slc37a3 (ENSMUSG00000029924) Rab19 (ENSMUSG00000029923) #10 Mkrn1 (ENSMUSG00000029922) #11 Dennd2a (ENSMUSG00000038456) #12 Adck2 (ENSMUSG00000046947) #13 Ndufb2 (ENSMUSG00000002416) #14 Braf (ENSMUSG00000002413) #15 Mrps33 (ENSMUSG00000029918) #17 Tmem178b (ENSMUSG00000057716) #18 Agk (ENSMUSG00000029916) #19 Dennd11 (ENSMUSG00000037172) #20 Wee2 (ENSMUSG00000037159) Ssbp1 (ENSMUSG00000029911) #22 Tas2r137 (ENSMUSG00000052850) #23 Tas2r108 (ENSMUSG00000037140) #24 Prss37 (ENSMUSG00000029909) #25 Or9a7 (ENSMUSG00000068259) #26 Or9a4 (ENSMUSG00000045514) Clec5a (ENSMUSG00000029915) #27 Tas2r138 (ENSMUSG00000058250) #28 Mgam (ENSMUSG00000068587) #29 Mgam2-ps (ENSMUSG00000102802) Moxd2 (ENSMUSG00000029885) Trbv1 (ENSMUSG00000076461) Prss58 (ENSMUSG00000051936) Prss59 (ENSMUSG00000029883) 1810009J06Rik (ENSMUSG00000094808) Gm2663 (ENSMUSG00000096525) Shrew mouse MODERN SPECIES 11 Parp12 (MGP_PahariEiJ_G0022000) #7 Kdm7a (MGP_PahariEiJ_G0022001) #8 MGP_PahariEiJ_G0022002 Rab19 (MGP_PahariEiJ_G0022003) #10 Mkrn1 (MGP_PahariEiJ_G0022004) #11 Dennd2a (MGP_PahariEiJ_G0022005) #12 Adck2 (MGP_PahariEiJ_G0022006) #13 MGP_PahariEiJ_G0022007 #13 Ndufb2 (MGP_PahariEiJ_G0022008) #14 Braf (MGP_PahariEiJ_G0022009) #15 Mrps33 (MGP_PahariEiJ_G0022010) #17 MGP_PahariEiJ_G0022011 #18 Agk (MGP_PahariEiJ_G0022012) #19 Dennd11 (MGP_PahariEiJ_G0022013) #20 Wee2 (MGP_PahariEiJ_G0022014) Ssbp1 (MGP_PahariEiJ_G0022015) #22 MGP_PahariEiJ_G0022016 Tas2r108 (MGP_PahariEiJ_G0022017) #24 Prss37 (MGP_PahariEiJ_G0022018) #25 Or9a4 (MGP_PahariEiJ_G0022019) Clec5a (MGP_PahariEiJ_G0022020) #27 Tas2r138 (MGP_PahariEiJ_G0022021) #28 MGP_PahariEiJ_G0022022 #29 Moxd2 (MGP_PahariEiJ_G0022023) Trbv1 (MGP_PahariEiJ_G0002045) Prss58 (MGP_PahariEiJ_G0022024) Prss59 (MGP_PahariEiJ_G0022025) MGP_PahariEiJ_G0022026 MGP_PahariEiJ_G0022027 MGP_PahariEiJ_G0022028 Prss3b (MGP_PahariEiJ_G0022029) Rat MODERN SPECIES 14 Tbxas1 (ENSRNOG00000007918) Parp12 (ENSRNOG00000008196) #7 Kdm7a (ENSRNOG00000052445) #8 Chmp4bl1 (ENSRNOG00000034071) Slc37a3 (ENSRNOG00000008725) Rab19 (ENSRNOG00000009030) #10 Mkrn1 (ENSRNOG00000009280) #11 Dennd2a (ENSRNOG00000026748) #12 Ndufb2 (ENSRNOG00000010005) #13 Braf (ENSRNOG00000010957) #15 Mrps33 (ENSRNOG00000026528) #17 Tmem178b (ENSRNOG00000047635) #18 Agk (ENSRNOG00000011509) #19 Dennd11 (ENSRNOG00000011854) #20 Wee2 (ENSRNOG00000026446) Ssbp1 (ENSRNOG00000012100) #22 Tas2r137 (ENSRNOG00000030413) #23 Tas2r108 (ENSRNOG00000012195) #24 Prss37 (ENSRNOG00000012201) #25 Or9a4 (ENSRNOG00000066955) Clec5a (ENSRNOG00000026306) #27 Tas2r138 (ENSRNOG00000026225) #28 Mgam (ENSRNOG00000026177) #29 Mgam2 (ENSRNOG00000066165) Moxd2 (ENSRNOG00000012916) Trbv1 (ENSRNOG00000048468) Prss58 (ENSRNOG00000013132) Prss59 (ENSRNOG00000028989) LOC312273 (ENSRNOG00000013203) LOC286960 (ENSRNOG00000013245) Prss3b (ENSRNOG00000013382) Cricetidae ANCESTRAL SPECIES 3 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044.w #14 ENSGT00940000156154 #15 ENSGT00390000011401 #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ENSGT01050000244883.A.a.a.a.b.k.a.a ENSGT00940000162509.l Cricetinae ANCESTRAL SPECIES 23 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.b ##11 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044.w #14 ENSGT00940000156154 #15 ENSGT00390000011401 #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.a ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.a ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.b.f Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 160 Fig4 (ENSCGRG00001015893) Gpr6 (ENSCGRG00001015004) Wasf1 (ENSCGRG00001013706) Cdc40 (ENSCGRG00001012490) Mettl24 (ENSCGRG00001012045) Ddo (ENSCGRG00001010313) Slc22a16 (ENSCGRG00001010111) ENSCGRG00001008723 ENSCGRG00001006339 Cdk19 (ENSCGRG00001013081) ENSCGRG00001010501 Gtf3c6 (ENSCGRG00001010188) ENSCGRG00001007331 ENSCGRG00001014458 Slc16a10 (ENSCGRG00001004043) ENSCGRG00001001576 #22 ENSCGRG00001000675 Mfsd4b5 (ENSCGRG00001023659) ENSCGRG00001021041 ENSCGRG00001019786 Mfsd4b4 (ENSCGRG00001018700) Rev3l (ENSCGRG00001006588) Traf3ip2 (ENSCGRG00001022894) Fyn (ENSCGRG00001013292) ENSCGRG00001012299 ENSCGRG00001014335 Ccn6 (ENSCGRG00001011722) Tube1 (ENSCGRG00001012631) Fam229b (ENSCGRG00001012149) Lama4 (ENSCGRG00001023009) Marcks (ENSCGRG00001020371) Chinese hamster chok1gshd MODERN SPECIES 153 Fbn2 (ENSCGRG00001020407) ENSCGRG00001024319 Slc12a2 (ENSCGRG00001019992) Ccdc192 (ENSCGRG00001017920) Ctxn3 (ENSCGRG00001003792) Prrc1 (ENSCGRG00001021725) Megf10 (ENSCGRG00001016594) C330018D20Rik (ENSCGRG00001000564) Marchf3 (ENSCGRG00001018443) Lmnb1 (ENSCGRG00001023736) Tex43 (ENSCGRG00001000467) Phax (ENSCGRG00001022020) ENSCGRG00001012154 ENSCGRG00001011295 Gramd3 (ENSCGRG00001014891) ENSCGRG00001013902 #22 Zfp608 (ENSCGRG00001015219) Csnk1g3 (ENSCGRG00001024465) Cep120 (ENSCGRG00001017499) Prdm6 (ENSCGRG00001016821) Ppic (ENSCGRG00001008818) Snx24 (ENSCGRG00001011694) ENSCGRG00001023240 Sncaip (ENSCGRG00001013058) Gykl1 (ENSCGRG00001001492) 1700034E13Rik (ENSCGRG00001001918) Zfp474 (ENSCGRG00001002746) Lox (ENSCGRG00001014607) Srfbp1 (ENSCGRG00001000718) Ftmt (ENSCGRG00001006087) ENSCGRG00001012009 Chinese hamster chok1gshd MODERN SPECIES 54 Kdm7a (ENSCGRG00001009052) #8 Slc37a3 (ENSCGRG00001009575) Rab19 (ENSCGRG00001003148) #10 ENSCGRG00001013880 Mkrn1 (ENSCGRG00001016621) #11 Dennd2a (ENSCGRG00001013315) #12 Adck2 (ENSCGRG00001016753) #13 Ndufb2 (ENSCGRG00001008411) #14 Braf (ENSCGRG00001021906) #15 ENSCGRG00001023061 Mrps33 (ENSCGRG00001000348) #17 ENSCGRG00001012889 #18 Agk (ENSCGRG00001013723) #19 Dennd11 (ENSCGRG00001015156) #20 Wee2 (ENSCGRG00001006258) ENSCGRG00001015635 #22 Tas2r137 (ENSCGRG00001009992) #23 Tas2r108 (ENSCGRG00001010522) #24 Prss37 (ENSCGRG00001018297) #25 Crot (ENSCGRG00001023042) Abcb4 (ENSCGRG00001013813) Abcb1b (ENSCGRG00001002555) ABCB1 (ENSCGRG00001014754) Rundc3b (ENSCGRG00001002136) Slc25a40 (ENSCGRG00001000177) Dbf4 (ENSCGRG00001014352) Adam22 (ENSCGRG00001024130) Sri (ENSCGRG00001010200) Steap4 (ENSCGRG00001019212) Zfp804b (ENSCGRG00001000316) Tex47 (ENSCGRG00001007269) Chinese hamster chok1gshd MODERN SPECIES 111 Cnr1 (ENSCGRG00001010105) Spaca1 (ENSCGRG00001016168) Akirin2 (ENSCGRG00001013427) Orc3 (ENSCGRG00001023069) Rars2 (ENSCGRG00001021675) SLC35A1 (ENSCGRG00001019920) Cfap206 (ENSCGRG00001002156) ENSCGRG00001014099 Smim8 (ENSCGRG00001012821) ENSCGRG00001006646 Zfp292 (ENSCGRG00001003267) Cga (ENSCGRG00001000454) ENSCGRG00001024026 ENSCGRG00001023523 Mob3b (ENSCGRG00001022528) ENSCGRG00001021493 #22 ENSCGRG00001006221 C9orf72 (ENSCGRG00001013910) Lingo2 (ENSCGRG00001009497) ENSCGRG00001010834 1700009N14Rik (ENSCGRG00001004727) Aco1 (ENSCGRG00001024337) Rigi (ENSCGRG00001024123) Topors (ENSCGRG00001022117) Ndufb6 (ENSCGRG00001021089) Tmem215 (ENSCGRG00001009559) Aptx (ENSCGRG00001000705) Dnaja1 (ENSCGRG00001009232) Smu1 (ENSCGRG00001023488) B4galt1 (ENSCGRG00001014638) Spink4 (ENSCGRG00001023982) Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 817 ENSMAUG00000003611 Rab19 (ENSMAUG00000001491) #10 ENSMAUG00000001183 ##11 Dennd2a (ENSMAUG00000000468) #12 Adck2 (ENSMAUG00000000751) #13 Ndufb2 (ENSMAUG00000000340) #14 Braf (ENSMAUG00000016066) #15 Mrps33 (ENSMAUG00000014314) #17 ENSMAUG00000018327 ENSMAUG00000017929 #18 ENSMAUG00000016360 Agk (ENSMAUG00000015011) #19 Dennd11 (ENSMAUG00000014079) #20 ENSMAUG00000013965 Wee2 (ENSMAUG00000013105) ENSMAUG00000016883 #22 Tas2r108 (ENSMAUG00000015894) #24 Prss37 (ENSMAUG00000014269) #25 Or9a4 (ENSMAUG00000015834) Clec5a (ENSMAUG00000013571) #27 ENSMAUG00000011057 #29 ENSMAUG00000011729 Golden Hamster MODERN SPECIES 617 Rnls (ENSMAUG00000006476) ENSMAUG00000004988 Lipf (ENSMAUG00000006602) Lipk (ENSMAUG00000008826) Lipn (ENSMAUG00000009129) Lipm (ENSMAUG00000006798) Ankrd22 (ENSMAUG00000005961) ENSMAUG00000004326 Acta2 (ENSMAUG00000007124) Fas (ENSMAUG00000008875) Ch25h (ENSMAUG00000001529) Lipa (ENSMAUG00000004120) Ifit2 (ENSMAUG00000004507) ENSMAUG00000004294 ENSMAUG00000004543 ENSMAUG00000006010 #22 Slc16a12 (ENSMAUG00000005932) Pank1 (ENSMAUG00000004211) Kif20b (ENSMAUG00000003707) Htr7 (ENSMAUG00000008537) Rpp30 (ENSMAUG00000008797) Ankrd1 (ENSMAUG00000004256) Pcgf5 (ENSMAUG00000006268) Hectd2 (ENSMAUG00000005723) Ppp1r3c (ENSMAUG00000021890) Tnks2 (ENSMAUG00000002675) Fgfbp3 (ENSMAUG00000003881) Btaf1 (ENSMAUG00000003977) Cpeb3 (ENSMAUG00000002789) ENSMAUG00000001811 ENSMAUG00000004621 Cricetidae_B ANCESTRAL SPECIES 10 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044.w #14 ENSGT00940000156154 #15 ENSGT00390000011401 #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ENSGT01050000244883.A.a.a.a.b.k.a.a ENSGT00940000162509.l Prairie vole MODERN SPECIES 87 Kdm7a (ENSMOCG00000012739) #8 Slc37a3 (ENSMOCG00000013977) ENSMOCG00000018385 Rab19 (ENSMOCG00000000473) #10 Mkrn1 (ENSMOCG00000006155) #11 Dennd2a (ENSMOCG00000012296) #12 Adck2 (ENSMOCG00000021171) #13 ENSMOCG00000016120 #14 Braf (ENSMOCG00000023027) #15 ENSMOCG00000016152 #17 ENSMOCG00000020593 #18 ENSMOCG00000000534 Agk (ENSMOCG00000003528) #19 Dennd11 (ENSMOCG00000018809) #20 Wee2 (ENSMOCG00000000778) Ssbp1 (ENSMOCG00000015007) #22 Prss37 (ENSMOCG00000000882) #25 Or9a4 (ENSMOCG00000002678) Clec5a (ENSMOCG00000016188) #27 ENSMOCG00000013070 #29 Moxd2 (ENSMOCG00000014636) Prss58 (ENSMOCG00000001185) Prss59 (ENSMOCG00000004650) ENSMOCG00000003387 ENSMOCG00000012091 Northern American deer mouse MODERN SPECIES 16 Tbxas1 (ENSPEMG00000012189) Parp12 (ENSPEMG00000023375) #7 Kdm7a (ENSPEMG00000007158) #8 Slc37a3 (ENSPEMG00000023926) Rab19 (ENSPEMG00000006800) #10 Mkrn1 (ENSPEMG00000023646) #11 Dennd2a (ENSPEMG00000021909) #12 Adck2 (ENSPEMG00000021773) #13 ENSPEMG00000023701 #14 Braf (ENSPEMG00000001337) #15 ENSPEMG00000021616 #17 ENSPEMG00000016644 #18 Agk (ENSPEMG00000018886) #19 Dennd11 (ENSPEMG00000009508) #20 Wee2 (ENSPEMG00000012913) Ssbp1 (ENSPEMG00000011838) #22 Tas2r137 (ENSPEMG00000013488) #23 Tas2r108 (ENSPEMG00000026064) #24 Prss37 (ENSPEMG00000017152) #25 Or9a4 (ENSPEMG00000009189) Clec5a (ENSPEMG00000017851) #27 Tas2r138 (ENSPEMG00000001418) #28 ENSPEMG00000008741 #29 Mgam2-ps (ENSPEMG00000028150) Moxd2 (ENSPEMG00000005786) Prss58 (ENSPEMG00000010113) Prss59 (ENSPEMG00000016197) ENSPEMG00000025308 ENSPEMG00000027928 ENSPEMG00000028207 ENSPEMG00000008477 Lesser Egyptian jerboa MODERN SPECIES 81 Fmc1 (ENSJJAG00000017491) Luc7l2 (ENSJJAG00000011456) Hipk2 (ENSJJAG00000019253) Tbxas1 (ENSJJAG00000020954) Parp12 (ENSJJAG00000019161) #7 Slc37a3 (ENSJJAG00000019794) Rab19 (ENSJJAG00000015955) #10 ENSJJAG00000010761 ##11 Dennd2a (ENSJJAG00000017109) #12 ENSJJAG00000000905 #13 Braf (ENSJJAG00000020559) #15 ENSJJAG00000016723 #17 ENSJJAG00000014217 #18 Wee2 (ENSJJAG00000022003) ENSJJAG00000001577 Ssbp1 (ENSJJAG00000016282) #22 Clec5a (ENSJJAG00000017338) #27 ENSJJAG00000013568 ENSJJAG00000017582 Moxd2 (ENSJJAG00000011768) Prss59 (ENSJJAG00000020845) ENSJJAG00000013742 ENSJJAG00000007203 Ephb6 (ENSJJAG00000015598) Trpv6 (ENSJJAG00000010273) Trpv5 (ENSJJAG00000020226) Tas2r144 (ENSJJAG00000017432) ##28 ENSJJAG00000012066 Tmem139 (ENSJJAG00000014062) Casp2 (ENSJJAG00000008256) Zyx (ENSJJAG00000016066) Kangaroo rat MODERN SPECIES 375 Parp12 (ENSDORG00000009525) #7 Kdm7a (ENSDORG00000012871) #8 Slc37a3 (ENSDORG00000013791) Rab19 (ENSDORG00000006983) #10 Mkrn1 (ENSDORG00000003480) ##11 Dennd2a (ENSDORG00000016236) #12 Adck2 (ENSDORG00000030048) #13 ENSDORG00000009731 Braf (ENSDORG00000009732) #15 ENSDORG00000024624 Mrps33 (ENSDORG00000007444) #17 ENSDORG00000026381 #18 Agk (ENSDORG00000003733) #19 Dennd11 (ENSDORG00000003736) #20 Wee2 (ENSDORG00000015156) Ssbp1 (ENSDORG00000015161) #22 Prss37 (ENSDORG00000015166) #25 Clec5a (ENSDORG00000000839) #27 ENSDORG00000007415 #29 ENSDORG00000007422 Moxd2 (ENSDORG00000007423) Prss58 (ENSDORG00000007425) Prss59 (ENSDORG00000027379) ENSDORG00000007428 ENSDORG00000026650 ENSDORG00000025187 ENSDORG00000024335 ENSDORG00000025731 ENSDORG00000023156 ENSDORG00000025009 ENSDORG00000008690 Rodentia_A ANCESTRAL SPECIES 12 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.b ##11 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401 #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000164718 #26 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163043 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l Sciuridae ANCESTRAL SPECIES 7 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.b ##11 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401 #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000164718 #26 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.b.b ENSGT00940000162480.a Marmotini ANCESTRAL SPECIES 32 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401.y.a #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000164718 #26 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT00940000161540 #29 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.b.b ENSGT01050000244883.A.a.a.a.b.k.a.b.b.a.a.c.b ENSGT01050000244883.A.a.a.a.b.k.a.b.b.a.a.c.a Alpin marmot MODERN SPECIES 35 PARP12 (ENSMMMG00000011607) #7 KDM7A (ENSMMMG00000011574) #8 ENSMMMG00000011544 MKRN1 (ENSMMMG00000011534) #11 DENND2A (ENSMMMG00000011518) #12 ADCK2 (ENSMMMG00000011466) #13 NDUFB2 (ENSMMMG00000011455) #14 BRAF (ENSMMMG00000011443) #15 ENSMMMG00000011427 #17 ENSMMMG00000011416 ENSMMMG00000011406 #17 TMEM178B (ENSMMMG00000011372) #18 AGK (ENSMMMG00000011318) #19 DENND11 (ENSMMMG00000011283) #20 WEE2 (ENSMMMG00000011258) SSBP1 (ENSMMMG00000011224) #22 ENSMMMG00000011214 #23 TAS2R4 (ENSMMMG00000011210) #24 ENSMMMG00000011201 #23 PRSS37 (ENSMMMG00000011182) #25 OR9A1P (ENSMMMG00000011173) #26 OR9A4 (ENSMMMG00000011167) CLEC5A (ENSMMMG00000011125) #27 MGAM (ENSMMMG00000010862) #29 MGAM2 (ENSMMMG00000009935) ENSMMMG00000009899 PRSS58 (ENSMMMG00000009890) ENSMMMG00000009883 ENSMMMG00000009748 ENSMMMG00000008868 ENSMMMG00000008499 Marmotini_b ANCESTRAL SPECIES 117 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139.i ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.a.a #11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401.y.a #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00940000164718 #26 ENSGT00940000163413 ENSGT00910000144330 #27 ENSGT00940000161540 #29 Squirrel MODERN SPECIES 192 CLEC2L (ENSSTOG00000021797) HIPK2 (ENSSTOG00000005957) TBXAS1 (ENSSTOG00000004552) PARP12 (ENSSTOG00000004578) #7 KDM7A (ENSSTOG00000012789) #8 ENSSTOG00000010929 ENSSTOG00000031161 ##11 DENND2A (ENSSTOG00000002912) #12 ADCK2 (ENSSTOG00000002559) #13 NDUFB2 (ENSSTOG00000002566) #14 BRAF (ENSSTOG00000002569) #15 ENSSTOG00000001019 #17 TMEM178B (ENSSTOG00000023428) #18 AGK (ENSSTOG00000020008) #19 DENND11 (ENSSTOG00000006980) #20 SSBP1 (ENSSTOG00000007007) #22 PRSS37 (ENSSTOG00000014505) #25 OR9A4 (ENSSTOG00000028119) CLEC5A (ENSSTOG00000015960) #27 ENSSTOG00000003319 #29 Arctic ground squirrel MODERN SPECIES 318 PARP12 (ENSUPAG00010015611) #7 KDM7A (ENSUPAG00010015626) #8 ENSUPAG00010015737 RAB19 (ENSUPAG00010015754) #10 MKRN1 (ENSUPAG00010015763) #11 DENND2A (ENSUPAG00010015818) #12 ADCK2 (ENSUPAG00010015851) #13 NDUFB2 (ENSUPAG00010015866) #14 BRAF (ENSUPAG00010015886) #15 ENSUPAG00010015929 MRPS33 (ENSUPAG00010015943) #17 TMEM178B (ENSUPAG00010015946) #18 AGK (ENSUPAG00010015967) #19 DENND11 (ENSUPAG00010015983) #20 WEE2 (ENSUPAG00010015989) SSBP1 (ENSUPAG00010016004) #22 ENSUPAG00010016035 #23 TAS2R4 (ENSUPAG00010016043) #24 ENSUPAG00010016047 #23 PRSS37 (ENSUPAG00010016052) #25 OR9A1P (ENSUPAG00010016064) #26 OR9A4 (ENSUPAG00010016069) CLEC5A (ENSUPAG00010016074) #27 MGAM (ENSUPAG00010016104) #29 Eurasian red squirrel MODERN SPECIES 17 KDM7A (ENSSVLG00005012470) #8 ENSSVLG00005012379 RAB19 (ENSSVLG00005012313) #10 ENSSVLG00005012241 ##11 ENSSVLG00005012011 #11 DENND2A (ENSSVLG00005011668) #12 ADCK2 (ENSSVLG00005011400) #13 NDUFB2 (ENSSVLG00005011276) #14 BRAF (ENSSVLG00005011137) #15 ENSSVLG00005011057 MRPS33 (ENSSVLG00005011000) #17 TMEM178B (ENSSVLG00005010943) #18 AGK (ENSSVLG00005010726) #19 DENND11 (ENSSVLG00005010569) #20 ENSSVLG00005010476 SSBP1 (ENSSVLG00005010423) #22 ENSSVLG00005010410 #23 ENSSVLG00005010344 #23 PRSS37 (ENSSVLG00005010291) #25 OR9A1P (ENSSVLG00005010283) #26 OR9A4 (ENSSVLG00005010273) CLEC5A (ENSSVLG00005010134) #27 TAS2R38 (ENSSVLG00005010093) #28 MGAM (ENSSVLG00005009048) #29 ENSSVLG00005008783 ENSSVLG00005008706 PRSS58 (ENSSVLG00005017027) ENSSVLG00005016942 ENSSVLG00005016228 ENSSVLG00005016073 ENSSVLG00005015340 Hystricomorpha ANCESTRAL SPECIES 35 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.b ##11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401 #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163043 ENSGT00940000163091 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.l ENSGT00940000154460.a ENSGT00940000163545.a Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 6 ENSHGLG00000005137 PLCB1 (ENSHGLG00000017610) ENSHGLG00000044330 PLCB4 (ENSHGLG00000018217) LAMP5 (ENSHGLG00000036148) ENSHGLG00000032981 PAK5 (ENSHGLG00000016050) ENSHGLG00000046856 ANKEF1 (ENSHGLG00000017245) ENSHGLG00000016926 ENSHGLG00000033517 ISM1 (ENSHGLG00000043849) TASP1 (ENSHGLG00000016276) ESF1 (ENSHGLG00000011505) NDUFAF5 (ENSHGLG00000012482) ENSHGLG00000021400 #22 ENSHGLG00000017747 ENSHGLG00000037190 FLRT3 (ENSHGLG00000016173) ENSHGLG00000032467 ENSHGLG00000017926 ENSHGLG00000016849 SNRPB2 (ENSHGLG00000006969) OTOR (ENSHGLG00000008576) ENSHGLG00000005046 ENSHGLG00000020281 ENSHGLG00000018289 BANF2 (ENSHGLG00000015254) SNX5 (ENSHGLG00000017606) OVOL2 (ENSHGLG00000045118) PET117 (ENSHGLG00000016254) Naked mole-rat female MODERN SPECIES 17 ENSHGLG00000009494 RAB19 (ENSHGLG00000010948) #10 ENSHGLG00000044578 ##11 ENSHGLG00000040747 ENSHGLG00000043500 DENND2A (ENSHGLG00000014310) #12 ADCK2 (ENSHGLG00000037504) #13 ENSHGLG00000017933 #14 BRAF (ENSHGLG00000014168) #15 ENSHGLG00000049810 ENSHGLG00000040990 #17 TMEM178B (ENSHGLG00000043245) #18 AGK (ENSHGLG00000046237) #19 DENND11 (ENSHGLG00000010322) #20 ENSHGLG00000011701 ENSHGLG00000009362 #22 TAS2R4 (ENSHGLG00000039087) #24 PRSS37 (ENSHGLG00000006169) #25 CLEC5A (ENSHGLG00000041574) #27 TAS2R38 (ENSHGLG00000008887) #28 MGAM (ENSHGLG00000009763) #29 ENSHGLG00000036048 #29 ENSHGLG00000012020 ENSHGLG00000004421 ENSHGLG00000006188 SEMA4D (ENSHGLG00000007257) ENSHGLG00000008542 ENSHGLG00000014380 CKS2 (ENSHGLG00000008721) SHC3 (ENSHGLG00000009124) ENSHGLG00000032550 Hystricomorpha_a ANCESTRAL SPECIES 40 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.b ##11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401 #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT00940000163545.a ENSGT00940000162480.b Guinea pig MODERN SPECIES 10 TBXAS1 (ENSCPOG00000000064) PARP12 (ENSCPOG00000011210) #7 KDM7A (ENSCPOG00000011219) #8 ENSCPOG00000003740 RAB19 (ENSCPOG00000031937) #10 MKRN1 (ENSCPOG00000000948) ##11 DENND2A (ENSCPOG00000030550) #12 ADCK2 (ENSCPOG00000031703) #13 NDUFB2 (ENSCPOG00000025368) #14 BRAF (ENSCPOG00000021487) #15 MRPS33 (ENSCPOG00000038792) #17 ENSCPOG00000020150 #18 AGK (ENSCPOG00000015447) #19 DENND11 (ENSCPOG00000015452) #20 ENSCPOG00000025291 SSBP1 (ENSCPOG00000040289) #22 TAS2R3 (ENSCPOG00000007635) #23 TAS2R4 (ENSCPOG00000026813) #24 PRSS37 (ENSCPOG00000004461) #25 CLEC5A (ENSCPOG00000039585) #27 MGAM (ENSCPOG00000011280) #29 ENSCPOG00000039963 MGAM2 (ENSCPOG00000009935) PRSS58 (ENSCPOG00000006756) ENSCPOG00000021713 ENSCPOG00000026673 ENSCPOG00000010598 ENSCPOG00000025586 ENSCPOG00000032580 ENSCPOG00000038762 ENSCPOG00000038847 Hystricomorpha_b ANCESTRAL SPECIES 40 ENSGT00940000157903 ENSGT00940000154649.B #7 ENSGT00940000158039 #8 ENSGT00940000163139 ENSGT00940000156717 #10 ENSGT00950000183077.a.a.a.a.b ##11 ENSGT00950000182931.B.a.a #12 ENSGT00390000001536 #13 ENSGT00390000004044 #14 ENSGT00940000156154 #15 ENSGT00390000011401 #17 ENSGT00390000015299.a.b.b.a #18 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT00940000161483 #25 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ENSGT01050000244883.A.a.a.b.x.m ENSGT00940000156687.g ENSGT00940000160399.d ENSGT00940000161809 Degu DUPLICATION Degu MODERN SPECIES 84 FAM107A (ENSODEG00000009417) ACOX2 (ENSODEG00000009665) KCTD6 (ENSODEG00000009456) PDHB (ENSODEG00000011071) PXK (ENSODEG00000009061) ENSODEG00000010715 ABHD6 (ENSODEG00000008297) ENSODEG00000010685 METTL6 (ENSODEG00000008650) EAF1 (ENSODEG00000008752) COLQ (ENSODEG00000009333) HACL1 (ENSODEG00000007866) ENSODEG00000019451 SH3BP5 (ENSODEG00000013984) CAPN7 (ENSODEG00000009154) ENSODEG00000008798 #22 DNAH1 (ENSODEG00000008443) BAP1 (ENSODEG00000008927) PHF7 (ENSODEG00000008416) SEMA3G (ENSODEG00000010653) ENSODEG00000010480 NISCH (ENSODEG00000007768) ENSODEG00000007867 ENSODEG00000008276 NT5DC2 (ENSODEG00000008156) UQCC5 (ENSODEG00000007436) ENSODEG00000019639 ENSODEG00000009139 PBRM1 (ENSODEG00000008265) GNL3 (ENSODEG00000009492) ENSODEG00000007760 Degu MODERN SPECIES 68 ENSODEG00000014445 ENSODEG00000014675 RAB19 (ENSODEG00000013764) #10 ENSODEG00000013658 ##11 ENSODEG00000013390 #12 ENSODEG00000014071 #13 NDUFB2 (ENSODEG00000013607) #14 BRAF (ENSODEG00000013401) #15 ENSODEG00000012846 ENSODEG00000014878 ENSODEG00000013320 ENSODEG00000013547 #18 AGK (ENSODEG00000015489) #19 DENND11 (ENSODEG00000013048) #20 ENSODEG00000013142 ENSODEG00000013367 #22 PRSS37 (ENSODEG00000013473) #25 CLEC5A (ENSODEG00000013699) #27 ENSODEG00000014828 #29 ENSODEG00000013408 ENSODEG00000012690 PRSS58 (ENSODEG00000013832) ENSODEG00000013684 ENSODEG00000012923 ENSODEG00000012554 ENSODEG00000013222 ENSODEG00000014167 ENSODEG00000012766 TRPV6 (ENSODEG00000015340) EPHB6 (ENSODEG00000012570) TRPV5 (ENSODEG00000014153) Long-tailed chinchilla MODERN SPECIES 201 SLC37A3 (ENSCLAG00000001923) #9 MKRN1 (ENSCLAG00000001783) ##11 ENSCLAG00000001763 DENND2A (ENSCLAG00000001519) #12 ADCK2 (ENSCLAG00000001471) #13 NDUFB2 (ENSCLAG00000001447) #14 ENSCLAG00000001414 ENSCLAG00000001297 #15 ENSCLAG00000001167 MRPS33 (ENSCLAG00000001134) #17 ENSCLAG00000001114 #18 AGK (ENSCLAG00000001071) #19 DENND11 (ENSCLAG00000001043) #20 ENSCLAG00000001751 WEE2 (ENSCLAG00000009356) SSBP1 (ENSCLAG00000009247) #22 PRSS37 (ENSCLAG00000008886) #25 CLEC5A (ENSCLAG00000008820) #27 TAS2R38 (ENSCLAG00000008669) #28 ENSCLAG00000007384 #29 ENSCLAG00000003350 ENSCLAG00000003095 ENSCLAG00000003077 PRSS58 (ENSCLAG00000002996) ENSCLAG00000001949 ENSCLAG00000001291 ENSCLAG00000001271 ENSCLAG00000001180 ENSCLAG00000001157 ENSCLAG00000001113 TRPV6 (ENSCLAG00000001066) Lagomorpha ANCESTRAL SPECIES 107 ENSGT00940000154961 #19 ENSGT00590000083189 #20 ENSGT00940000158803 ENSGT00390000002796 #22 ENSGT01100000263477.A.b.b #23 ENSGT01100000263477.C #24 ENSGT00940000161483 #25 ENSGT00910000144330 #27 ENSGT01100000263477.A.a.a #28 ENSGT00940000161540 #29 ENSGT00940000163091 ENSGT00940000163043 ENSGT00530000063085.A.a ENSGT00940000153130.b ENSGT01020000230389.b.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT01050000244883.A.a.a.b.x ENSGT00940000154460.a ENSGT00940000164097 Rabbit DUPLICATION Rabbit DUPLICATION Rabbit MODERN SPECIES 1401 APLN (ENSOCUG00000022649) OCRL (ENSOCUG00000016167) SMARCA1 (ENSOCUG00000001047) ENSOCUG00000025977 ENSOCUG00000030104 ENSOCUG00000034526 ENSOCUG00000002602 ENSOCUG00000029410 PRR32 (ENSOCUG00000015056) ENSOCUG00000000908 ENSOCUG00000010499 ENSOCUG00000006392 ENSOCUG00000023025 TENM1 (ENSOCUG00000005013) SH2D1A (ENSOCUG00000005012) ENSOCUG00000022591 #22 STAG2 (ENSOCUG00000009879) ENSOCUG00000009878 THOC2 (ENSOCUG00000005996) GRIA3 (ENSOCUG00000000315) ENSOCUG00000021549 ENSOCUG00000027726 C1GALT1C1 (ENSOCUG00000004781) ENSOCUG00000014315 CUL4B (ENSOCUG00000015633) ENSOCUG00000027764 LAMP2 (ENSOCUG00000024954) ATP1B4 (ENSOCUG00000003951) TMEM255A (ENSOCUG00000004334) ZBTB33 (ENSOCUG00000004331) ENSOCUG00000029262 Rabbit MODERN SPECIES 18 MDFIC (ENSOCUG00000012455) TFEC (ENSOCUG00000006292) TES (ENSOCUG00000008491) CAV2 (ENSOCUG00000014515) CAV1 (ENSOCUG00000014520) MET (ENSOCUG00000013060) ST7 (ENSOCUG00000016156) WNT2 (ENSOCUG00000016173) ASZ1 (ENSOCUG00000015962) CFTR (ENSOCUG00000010733) ENSOCUG00000038182 CTTNBP2 (ENSOCUG00000001386) LSM8 (ENSOCUG00000017359) ENSOCUG00000021922 ENSOCUG00000032257 ENSOCUG00000023965 #22 ENSOCUG00000037642 KCND2 (ENSOCUG00000004149) TSPAN12 (ENSOCUG00000001875) ENSOCUG00000034467 ING3 (ENSOCUG00000001881) CPED1 (ENSOCUG00000005778) WNT16 (ENSOCUG00000014744) FAM3C (ENSOCUG00000003351) PTPRZ1 (ENSOCUG00000013209) AASS (ENSOCUG00000013237) FEZF1 (ENSOCUG00000021285) ENSOCUG00000039223 ENSOCUG00000033009 CADPS2 (ENSOCUG00000007425) TAS2R16 (ENSOCUG00000017889) ##28 Rabbit MODERN SPECIES 491 ENSOCUG00000022873 #18 DENND11 (ENSOCUG00000017559) #20 WEE2 (ENSOCUG00000026396) ENSOCUG00000003799 #22 TAS2R3 (ENSOCUG00000003800) #23 TAS2R4 (ENSOCUG00000003805) #24 PRSS37 (ENSOCUG00000006129) #25 ENSOCUG00000022171 ENSOCUG00000037719 CLEC5A (ENSOCUG00000009582) #27 ENSOCUG00000031008 #28 MGAM (ENSOCUG00000008177) #29 ENSOCUG00000000872 ENSOCUG00000000387 ENSOCUG00000025914 PRSS58 (ENSOCUG00000000389) ENSOCUG00000000393 ENSOCUG00000025211 ENSOCUG00000026000 Pika MODERN SPECIES 1889 AGK (ENSOPRG00000012230) #19 DENND11 (ENSOPRG00000012249) #20 WEE2 (ENSOPRG00000009103) SSBP1 (ENSOPRG00000003195) #22 TAS2R4 (ENSOPRG00000009115) #24 PRSS37 (ENSOPRG00000009119) #25