Boreoeutheria	ANCESTRAL SPECIES	13	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a
Euarchontoglires	ANCESTRAL SPECIES	13	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a
Euarchontoglires_A	ANCESTRAL SPECIES	17	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a
Glires	ANCESTRAL SPECIES	18	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a	ENSGT00940000162509.l
Rodentia	ANCESTRAL SPECIES	12	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163043	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b
Rodentia_B	ANCESTRAL SPECIES	9	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a
Myomorpha	ANCESTRAL SPECIES	8	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a
Muroidea	ANCESTRAL SPECIES	8	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	1840	Parp12 (ENSNGAG00000015925) #7	Kdm7a (ENSNGAG00000010381) #8	ENSNGAG00000007888 #9	Rab19 (ENSNGAG00000017844) #10	Mkrn1 (ENSNGAG00000019077) #11	Dennd2a (ENSNGAG00000016156) #12	Adck2 (ENSNGAG00000010919) #13	Ndufb2 (ENSNGAG00000016898) #14	Braf (ENSNGAG00000014000) #15	ENSNGAG00000011360 #16	Mrps33 (ENSNGAG00000014172) #17	ENSNGAG00000021460 #18	Agk (ENSNGAG00000007692) #19	Dennd11 (ENSNGAG00000011955) #20	ENSNGAG00000019527 #21	Ssbp1 (ENSNGAG00000014269) #22	Tas2r137 (ENSNGAG00000016702) #23	Tas2r108 (ENSNGAG00000015066) #24	Prss37 (ENSNGAG00000000102) #25	Or9a7 (ENSNGAG00000017910) #26	Clec5a (ENSNGAG00000017609) #27	Tas2r138 (ENSNGAG00000015138) #28	ENSNGAG00000010341 #29
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a
Murinae	ANCESTRAL SPECIES	4	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a
Mus	ANCESTRAL SPECIES	20	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a
Mus_A	ANCESTRAL SPECIES	7	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401.s #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a
Ryukyu mouse	MODERN SPECIES	15	Parp12 (MGP_CAROLIEiJ_G0028242) #7	MGP_CAROLIEiJ_G0028243 #8	MGP_CAROLIEiJ_G0028244	Rab19 (MGP_CAROLIEiJ_G0028245) #10	Mkrn1 (MGP_CAROLIEiJ_G0028246) #11	Dennd2a (MGP_CAROLIEiJ_G0028247) #12	Adck2 (MGP_CAROLIEiJ_G0028248) #13	MGP_CAROLIEiJ_G0028249 #13	Ndufb2 (MGP_CAROLIEiJ_G0028250) #14	Braf (MGP_CAROLIEiJ_G0028251) #15	Mrps33 (MGP_CAROLIEiJ_G0028252) #17	MGP_CAROLIEiJ_G0028253 #18	Agk (MGP_CAROLIEiJ_G0028254) #19	Dennd11 (MGP_CAROLIEiJ_G0028255) #20	Wee2 (MGP_CAROLIEiJ_G0028256)	Ssbp1 (MGP_CAROLIEiJ_G0028257) #22	MGP_CAROLIEiJ_G0028258	Tas2r108 (MGP_CAROLIEiJ_G0028259) #24	Prss37 (MGP_CAROLIEiJ_G0028260) #25	Or9a7 (MGP_CAROLIEiJ_G0028261) #26	Or9a4 (MGP_CAROLIEiJ_G0028262)	Clec5a (MGP_CAROLIEiJ_G0028263) #27	Tas2r138 (MGP_CAROLIEiJ_G0028264) #28	MGP_CAROLIEiJ_G0028265 #29	Moxd2 (MGP_CAROLIEiJ_G0028266)	Trbv1 (MGP_CAROLIEiJ_G0002243)	Prss58 (MGP_CAROLIEiJ_G0028267)	Prss59 (MGP_CAROLIEiJ_G0028268)	MGP_CAROLIEiJ_G0028269	MGP_CAROLIEiJ_G0028270	MGP_CAROLIEiJ_G0028271
Mus_B	ANCESTRAL SPECIES	20	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401.s #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a
Mus_C	ANCESTRAL SPECIES	19	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401.s #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a	ENSGT01050000244883.A.a.a.a.b.k.b
spretus	MODERN SPECIES	15	Parp12 (MGP_SPRETEiJ_G0029241) #7	Kdm7a (MGP_SPRETEiJ_G0029242) #8	Slc37a3 (MGP_SPRETEiJ_G0029243)	Rab19 (MGP_SPRETEiJ_G0029244) #10	Mkrn1 (MGP_SPRETEiJ_G0029245) #11	Dennd2a (MGP_SPRETEiJ_G0029246) #12	Adck2 (MGP_SPRETEiJ_G0029247) #13	MGP_SPRETEiJ_G0029248 #13	Ndufb2 (MGP_SPRETEiJ_G0029249) #14	Braf (MGP_SPRETEiJ_G0029250) #15	Mrps33 (MGP_SPRETEiJ_G0029251) #17	MGP_SPRETEiJ_G0029252 #18	Agk (MGP_SPRETEiJ_G0029253) #19	Dennd11 (MGP_SPRETEiJ_G0029254) #20	Wee2 (MGP_SPRETEiJ_G0029255)	Ssbp1 (MGP_SPRETEiJ_G0029256) #22	MGP_SPRETEiJ_G0029257	Tas2r108 (MGP_SPRETEiJ_G0029258) #24	Prss37 (MGP_SPRETEiJ_G0029259) #25	MGP_SPRETEiJ_G0029260	Or9a4 (MGP_SPRETEiJ_G0029261)	Clec5a (MGP_SPRETEiJ_G0029262) #27	Tas2r138 (MGP_SPRETEiJ_G0029263) #28	MGP_SPRETEiJ_G0029264 #29	Moxd2 (MGP_SPRETEiJ_G0029265)	Trbv1 (MGP_SPRETEiJ_G0002397)	Prss58 (MGP_SPRETEiJ_G0029266)	Prss59 (MGP_SPRETEiJ_G0029267)	MGP_SPRETEiJ_G0029268	MGP_SPRETEiJ_G0029269	MGP_SPRETEiJ_G0029270
Steppe mouse	MODERN SPECIES	3159	Parp12 (ENSMSIG00000003821) #7	Kdm7a (ENSMSIG00000003734) #8	Slc37a3 (ENSMSIG00000003657)	Rab19 (ENSMSIG00000003633) #10	Mkrn1 (ENSMSIG00000003580) #11	ENSMSIG00000003618	Dennd2a (ENSMSIG00000003496) #12	Adck2 (ENSMSIG00000003366) #13	Ndufb2 (ENSMSIG00000003342) #14	Braf (ENSMSIG00000003138) #15	ENSMSIG00000003115 #17	ENSMSIG00000003101 #18	Agk (ENSMSIG00000003072) #19	Dennd11 (ENSMSIG00000003036) #20	Wee2 (ENSMSIG00000002990)	Ssbp1 (ENSMSIG00000002905) #22	Tas2r137 (ENSMSIG00000002897) #23	Tas2r108 (ENSMSIG00000002885) #24	Prss37 (ENSMSIG00000002853) #25	Or9a7 (ENSMSIG00000002837) #26	Clec5a (ENSMSIG00000002705) #27	Tas2r138 (ENSMSIG00000002690) #28	ENSMSIG00000002337 #29	ENSMSIG00000001963	Moxd2 (ENSMSIG00000001914)	Trbv1 (ENSMSIG00000001891)	Prss59 (ENSMSIG00000001848)	ENSMSIG00000001830
Mouse	MODERN SPECIES	15	Tbxas1 (ENSMUSG00000029925)	Parp12 (ENSMUSG00000038507) #7	Kdm7a (ENSMUSG00000042599) #8	Slc37a3 (ENSMUSG00000029924)	Rab19 (ENSMUSG00000029923) #10	Mkrn1 (ENSMUSG00000029922) #11	Dennd2a (ENSMUSG00000038456) #12	Adck2 (ENSMUSG00000046947) #13	Ndufb2 (ENSMUSG00000002416) #14	Braf (ENSMUSG00000002413) #15	Mrps33 (ENSMUSG00000029918) #17	Tmem178b (ENSMUSG00000057716) #18	Agk (ENSMUSG00000029916) #19	Dennd11 (ENSMUSG00000037172) #20	Wee2 (ENSMUSG00000037159)	Ssbp1 (ENSMUSG00000029911) #22	Tas2r137 (ENSMUSG00000052850) #23	Tas2r108 (ENSMUSG00000037140) #24	Prss37 (ENSMUSG00000029909) #25	Or9a7 (ENSMUSG00000068259) #26	Or9a4 (ENSMUSG00000045514)	Clec5a (ENSMUSG00000029915) #27	Tas2r138 (ENSMUSG00000058250) #28	Mgam (ENSMUSG00000068587) #29	Mgam2-ps (ENSMUSG00000102802)	Moxd2 (ENSMUSG00000029885)	Trbv1 (ENSMUSG00000076461)	Prss58 (ENSMUSG00000051936)	Prss59 (ENSMUSG00000029883)	1810009J06Rik (ENSMUSG00000094808)	Gm2663 (ENSMUSG00000096525)
Shrew mouse	MODERN SPECIES	11	Parp12 (MGP_PahariEiJ_G0022000) #7	Kdm7a (MGP_PahariEiJ_G0022001) #8	MGP_PahariEiJ_G0022002	Rab19 (MGP_PahariEiJ_G0022003) #10	Mkrn1 (MGP_PahariEiJ_G0022004) #11	Dennd2a (MGP_PahariEiJ_G0022005) #12	Adck2 (MGP_PahariEiJ_G0022006) #13	MGP_PahariEiJ_G0022007 #13	Ndufb2 (MGP_PahariEiJ_G0022008) #14	Braf (MGP_PahariEiJ_G0022009) #15	Mrps33 (MGP_PahariEiJ_G0022010) #17	MGP_PahariEiJ_G0022011 #18	Agk (MGP_PahariEiJ_G0022012) #19	Dennd11 (MGP_PahariEiJ_G0022013) #20	Wee2 (MGP_PahariEiJ_G0022014)	Ssbp1 (MGP_PahariEiJ_G0022015) #22	MGP_PahariEiJ_G0022016	Tas2r108 (MGP_PahariEiJ_G0022017) #24	Prss37 (MGP_PahariEiJ_G0022018) #25	Or9a4 (MGP_PahariEiJ_G0022019)	Clec5a (MGP_PahariEiJ_G0022020) #27	Tas2r138 (MGP_PahariEiJ_G0022021) #28	MGP_PahariEiJ_G0022022 #29	Moxd2 (MGP_PahariEiJ_G0022023)	Trbv1 (MGP_PahariEiJ_G0002045)	Prss58 (MGP_PahariEiJ_G0022024)	Prss59 (MGP_PahariEiJ_G0022025)	MGP_PahariEiJ_G0022026	MGP_PahariEiJ_G0022027	MGP_PahariEiJ_G0022028	Prss3b (MGP_PahariEiJ_G0022029)
Rat	MODERN SPECIES	14	Tbxas1 (ENSRNOG00000007918)	Parp12 (ENSRNOG00000008196) #7	Kdm7a (ENSRNOG00000052445) #8	Chmp4bl1 (ENSRNOG00000034071)	Slc37a3 (ENSRNOG00000008725)	Rab19 (ENSRNOG00000009030) #10	Mkrn1 (ENSRNOG00000009280) #11	Dennd2a (ENSRNOG00000026748) #12	Ndufb2 (ENSRNOG00000010005) #13	Braf (ENSRNOG00000010957) #15	Mrps33 (ENSRNOG00000026528) #17	Tmem178b (ENSRNOG00000047635) #18	Agk (ENSRNOG00000011509) #19	Dennd11 (ENSRNOG00000011854) #20	Wee2 (ENSRNOG00000026446)	Ssbp1 (ENSRNOG00000012100) #22	Tas2r137 (ENSRNOG00000030413) #23	Tas2r108 (ENSRNOG00000012195) #24	Prss37 (ENSRNOG00000012201) #25	Or9a4 (ENSRNOG00000066955)	Clec5a (ENSRNOG00000026306) #27	Tas2r138 (ENSRNOG00000026225) #28	Mgam (ENSRNOG00000026177) #29	Mgam2 (ENSRNOG00000066165)	Moxd2 (ENSRNOG00000012916)	Trbv1 (ENSRNOG00000048468)	Prss58 (ENSRNOG00000013132)	Prss59 (ENSRNOG00000028989)	LOC312273 (ENSRNOG00000013203)	LOC286960 (ENSRNOG00000013245)	Prss3b (ENSRNOG00000013382)
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044.w #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.a	ENSGT00940000162509.l
Cricetinae	ANCESTRAL SPECIES	23	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.b ##11	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044.w #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b	ENSGT01050000244883.A.a.a.a.b.k.a.a	ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.a	ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.b.f
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	160	Fig4 (ENSCGRG00001015893)	Gpr6 (ENSCGRG00001015004)	Wasf1 (ENSCGRG00001013706)	Cdc40 (ENSCGRG00001012490)	Mettl24 (ENSCGRG00001012045)	Ddo (ENSCGRG00001010313)	Slc22a16 (ENSCGRG00001010111)	ENSCGRG00001008723	ENSCGRG00001006339	Cdk19 (ENSCGRG00001013081)	ENSCGRG00001010501	Gtf3c6 (ENSCGRG00001010188)	ENSCGRG00001007331	ENSCGRG00001014458	Slc16a10 (ENSCGRG00001004043)	ENSCGRG00001001576 #22	ENSCGRG00001000675	Mfsd4b5 (ENSCGRG00001023659)	ENSCGRG00001021041	ENSCGRG00001019786	Mfsd4b4 (ENSCGRG00001018700)	Rev3l (ENSCGRG00001006588)	Traf3ip2 (ENSCGRG00001022894)	Fyn (ENSCGRG00001013292)	ENSCGRG00001012299	ENSCGRG00001014335	Ccn6 (ENSCGRG00001011722)	Tube1 (ENSCGRG00001012631)	Fam229b (ENSCGRG00001012149)	Lama4 (ENSCGRG00001023009)	Marcks (ENSCGRG00001020371)
Chinese hamster chok1gshd	MODERN SPECIES	153	Fbn2 (ENSCGRG00001020407)	ENSCGRG00001024319	Slc12a2 (ENSCGRG00001019992)	Ccdc192 (ENSCGRG00001017920)	Ctxn3 (ENSCGRG00001003792)	Prrc1 (ENSCGRG00001021725)	Megf10 (ENSCGRG00001016594)	C330018D20Rik (ENSCGRG00001000564)	Marchf3 (ENSCGRG00001018443)	Lmnb1 (ENSCGRG00001023736)	Tex43 (ENSCGRG00001000467)	Phax (ENSCGRG00001022020)	ENSCGRG00001012154	ENSCGRG00001011295	Gramd3 (ENSCGRG00001014891)	ENSCGRG00001013902 #22	Zfp608 (ENSCGRG00001015219)	Csnk1g3 (ENSCGRG00001024465)	Cep120 (ENSCGRG00001017499)	Prdm6 (ENSCGRG00001016821)	Ppic (ENSCGRG00001008818)	Snx24 (ENSCGRG00001011694)	ENSCGRG00001023240	Sncaip (ENSCGRG00001013058)	Gykl1 (ENSCGRG00001001492)	1700034E13Rik (ENSCGRG00001001918)	Zfp474 (ENSCGRG00001002746)	Lox (ENSCGRG00001014607)	Srfbp1 (ENSCGRG00001000718)	Ftmt (ENSCGRG00001006087)	ENSCGRG00001012009
Chinese hamster chok1gshd	MODERN SPECIES	54	Kdm7a (ENSCGRG00001009052) #8	Slc37a3 (ENSCGRG00001009575)	Rab19 (ENSCGRG00001003148) #10	ENSCGRG00001013880	Mkrn1 (ENSCGRG00001016621) #11	Dennd2a (ENSCGRG00001013315) #12	Adck2 (ENSCGRG00001016753) #13	Ndufb2 (ENSCGRG00001008411) #14	Braf (ENSCGRG00001021906) #15	ENSCGRG00001023061	Mrps33 (ENSCGRG00001000348) #17	ENSCGRG00001012889 #18	Agk (ENSCGRG00001013723) #19	Dennd11 (ENSCGRG00001015156) #20	Wee2 (ENSCGRG00001006258)	ENSCGRG00001015635 #22	Tas2r137 (ENSCGRG00001009992) #23	Tas2r108 (ENSCGRG00001010522) #24	Prss37 (ENSCGRG00001018297) #25	Crot (ENSCGRG00001023042)	Abcb4 (ENSCGRG00001013813)	Abcb1b (ENSCGRG00001002555)	ABCB1 (ENSCGRG00001014754)	Rundc3b (ENSCGRG00001002136)	Slc25a40 (ENSCGRG00001000177)	Dbf4 (ENSCGRG00001014352)	Adam22 (ENSCGRG00001024130)	Sri (ENSCGRG00001010200)	Steap4 (ENSCGRG00001019212)	Zfp804b (ENSCGRG00001000316)	Tex47 (ENSCGRG00001007269)
Chinese hamster chok1gshd	MODERN SPECIES	111	Cnr1 (ENSCGRG00001010105)	Spaca1 (ENSCGRG00001016168)	Akirin2 (ENSCGRG00001013427)	Orc3 (ENSCGRG00001023069)	Rars2 (ENSCGRG00001021675)	SLC35A1 (ENSCGRG00001019920)	Cfap206 (ENSCGRG00001002156)	ENSCGRG00001014099	Smim8 (ENSCGRG00001012821)	ENSCGRG00001006646	Zfp292 (ENSCGRG00001003267)	Cga (ENSCGRG00001000454)	ENSCGRG00001024026	ENSCGRG00001023523	Mob3b (ENSCGRG00001022528)	ENSCGRG00001021493 #22	ENSCGRG00001006221	C9orf72 (ENSCGRG00001013910)	Lingo2 (ENSCGRG00001009497)	ENSCGRG00001010834	1700009N14Rik (ENSCGRG00001004727)	Aco1 (ENSCGRG00001024337)	Rigi (ENSCGRG00001024123)	Topors (ENSCGRG00001022117)	Ndufb6 (ENSCGRG00001021089)	Tmem215 (ENSCGRG00001009559)	Aptx (ENSCGRG00001000705)	Dnaja1 (ENSCGRG00001009232)	Smu1 (ENSCGRG00001023488)	B4galt1 (ENSCGRG00001014638)	Spink4 (ENSCGRG00001023982)
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	817	ENSMAUG00000003611	Rab19 (ENSMAUG00000001491) #10	ENSMAUG00000001183 ##11	Dennd2a (ENSMAUG00000000468) #12	Adck2 (ENSMAUG00000000751) #13	Ndufb2 (ENSMAUG00000000340) #14	Braf (ENSMAUG00000016066) #15	Mrps33 (ENSMAUG00000014314) #17	ENSMAUG00000018327	ENSMAUG00000017929 #18	ENSMAUG00000016360	Agk (ENSMAUG00000015011) #19	Dennd11 (ENSMAUG00000014079) #20	ENSMAUG00000013965	Wee2 (ENSMAUG00000013105)	ENSMAUG00000016883 #22	Tas2r108 (ENSMAUG00000015894) #24	Prss37 (ENSMAUG00000014269) #25	Or9a4 (ENSMAUG00000015834)	Clec5a (ENSMAUG00000013571) #27	ENSMAUG00000011057 #29	ENSMAUG00000011729
Golden Hamster	MODERN SPECIES	617	Rnls (ENSMAUG00000006476)	ENSMAUG00000004988	Lipf (ENSMAUG00000006602)	Lipk (ENSMAUG00000008826)	Lipn (ENSMAUG00000009129)	Lipm (ENSMAUG00000006798)	Ankrd22 (ENSMAUG00000005961)	ENSMAUG00000004326	Acta2 (ENSMAUG00000007124)	Fas (ENSMAUG00000008875)	Ch25h (ENSMAUG00000001529)	Lipa (ENSMAUG00000004120)	Ifit2 (ENSMAUG00000004507)	ENSMAUG00000004294	ENSMAUG00000004543	ENSMAUG00000006010 #22	Slc16a12 (ENSMAUG00000005932)	Pank1 (ENSMAUG00000004211)	Kif20b (ENSMAUG00000003707)	Htr7 (ENSMAUG00000008537)	Rpp30 (ENSMAUG00000008797)	Ankrd1 (ENSMAUG00000004256)	Pcgf5 (ENSMAUG00000006268)	Hectd2 (ENSMAUG00000005723)	Ppp1r3c (ENSMAUG00000021890)	Tnks2 (ENSMAUG00000002675)	Fgfbp3 (ENSMAUG00000003881)	Btaf1 (ENSMAUG00000003977)	Cpeb3 (ENSMAUG00000002789)	ENSMAUG00000001811	ENSMAUG00000004621
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044.w #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.a	ENSGT00940000162509.l
Prairie vole	MODERN SPECIES	87	Kdm7a (ENSMOCG00000012739) #8	Slc37a3 (ENSMOCG00000013977)	ENSMOCG00000018385	Rab19 (ENSMOCG00000000473) #10	Mkrn1 (ENSMOCG00000006155) #11	Dennd2a (ENSMOCG00000012296) #12	Adck2 (ENSMOCG00000021171) #13	ENSMOCG00000016120 #14	Braf (ENSMOCG00000023027) #15	ENSMOCG00000016152 #17	ENSMOCG00000020593 #18	ENSMOCG00000000534	Agk (ENSMOCG00000003528) #19	Dennd11 (ENSMOCG00000018809) #20	Wee2 (ENSMOCG00000000778)	Ssbp1 (ENSMOCG00000015007) #22	Prss37 (ENSMOCG00000000882) #25	Or9a4 (ENSMOCG00000002678)	Clec5a (ENSMOCG00000016188) #27	ENSMOCG00000013070 #29	Moxd2 (ENSMOCG00000014636)	Prss58 (ENSMOCG00000001185)	Prss59 (ENSMOCG00000004650)	ENSMOCG00000003387	ENSMOCG00000012091
Northern American deer mouse	MODERN SPECIES	16	Tbxas1 (ENSPEMG00000012189)	Parp12 (ENSPEMG00000023375) #7	Kdm7a (ENSPEMG00000007158) #8	Slc37a3 (ENSPEMG00000023926)	Rab19 (ENSPEMG00000006800) #10	Mkrn1 (ENSPEMG00000023646) #11	Dennd2a (ENSPEMG00000021909) #12	Adck2 (ENSPEMG00000021773) #13	ENSPEMG00000023701 #14	Braf (ENSPEMG00000001337) #15	ENSPEMG00000021616 #17	ENSPEMG00000016644 #18	Agk (ENSPEMG00000018886) #19	Dennd11 (ENSPEMG00000009508) #20	Wee2 (ENSPEMG00000012913)	Ssbp1 (ENSPEMG00000011838) #22	Tas2r137 (ENSPEMG00000013488) #23	Tas2r108 (ENSPEMG00000026064) #24	Prss37 (ENSPEMG00000017152) #25	Or9a4 (ENSPEMG00000009189)	Clec5a (ENSPEMG00000017851) #27	Tas2r138 (ENSPEMG00000001418) #28	ENSPEMG00000008741 #29	Mgam2-ps (ENSPEMG00000028150)	Moxd2 (ENSPEMG00000005786)	Prss58 (ENSPEMG00000010113)	Prss59 (ENSPEMG00000016197)	ENSPEMG00000025308	ENSPEMG00000027928	ENSPEMG00000028207	ENSPEMG00000008477
Lesser Egyptian jerboa	MODERN SPECIES	81	Fmc1 (ENSJJAG00000017491)	Luc7l2 (ENSJJAG00000011456)	Hipk2 (ENSJJAG00000019253)	Tbxas1 (ENSJJAG00000020954)	Parp12 (ENSJJAG00000019161) #7	Slc37a3 (ENSJJAG00000019794)	Rab19 (ENSJJAG00000015955) #10	ENSJJAG00000010761 ##11	Dennd2a (ENSJJAG00000017109) #12	ENSJJAG00000000905 #13	Braf (ENSJJAG00000020559) #15	ENSJJAG00000016723 #17	ENSJJAG00000014217 #18	Wee2 (ENSJJAG00000022003)	ENSJJAG00000001577	Ssbp1 (ENSJJAG00000016282) #22	Clec5a (ENSJJAG00000017338) #27	ENSJJAG00000013568	ENSJJAG00000017582	Moxd2 (ENSJJAG00000011768)	Prss59 (ENSJJAG00000020845)	ENSJJAG00000013742	ENSJJAG00000007203	Ephb6 (ENSJJAG00000015598)	Trpv6 (ENSJJAG00000010273)	Trpv5 (ENSJJAG00000020226)	Tas2r144 (ENSJJAG00000017432) ##28	ENSJJAG00000012066	Tmem139 (ENSJJAG00000014062)	Casp2 (ENSJJAG00000008256)	Zyx (ENSJJAG00000016066)
Kangaroo rat	MODERN SPECIES	375	Parp12 (ENSDORG00000009525) #7	Kdm7a (ENSDORG00000012871) #8	Slc37a3 (ENSDORG00000013791)	Rab19 (ENSDORG00000006983) #10	Mkrn1 (ENSDORG00000003480) ##11	Dennd2a (ENSDORG00000016236) #12	Adck2 (ENSDORG00000030048) #13	ENSDORG00000009731	Braf (ENSDORG00000009732) #15	ENSDORG00000024624	Mrps33 (ENSDORG00000007444) #17	ENSDORG00000026381 #18	Agk (ENSDORG00000003733) #19	Dennd11 (ENSDORG00000003736) #20	Wee2 (ENSDORG00000015156)	Ssbp1 (ENSDORG00000015161) #22	Prss37 (ENSDORG00000015166) #25	Clec5a (ENSDORG00000000839) #27	ENSDORG00000007415 #29	ENSDORG00000007422	Moxd2 (ENSDORG00000007423)	Prss58 (ENSDORG00000007425)	Prss59 (ENSDORG00000027379)	ENSDORG00000007428	ENSDORG00000026650	ENSDORG00000025187	ENSDORG00000024335	ENSDORG00000025731	ENSDORG00000023156	ENSDORG00000025009	ENSDORG00000008690
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163043	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l
Sciuridae	ANCESTRAL SPECIES	7	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.b.b	ENSGT00940000162480.a
Marmotini	ANCESTRAL SPECIES	32	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401.y.a #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.b.b	ENSGT01050000244883.A.a.a.a.b.k.a.b.b.a.a.c.b	ENSGT01050000244883.A.a.a.a.b.k.a.b.b.a.a.c.a
Alpin marmot	MODERN SPECIES	35	PARP12 (ENSMMMG00000011607) #7	KDM7A (ENSMMMG00000011574) #8	ENSMMMG00000011544	MKRN1 (ENSMMMG00000011534) #11	DENND2A (ENSMMMG00000011518) #12	ADCK2 (ENSMMMG00000011466) #13	NDUFB2 (ENSMMMG00000011455) #14	BRAF (ENSMMMG00000011443) #15	ENSMMMG00000011427 #17	ENSMMMG00000011416	ENSMMMG00000011406 #17	TMEM178B (ENSMMMG00000011372) #18	AGK (ENSMMMG00000011318) #19	DENND11 (ENSMMMG00000011283) #20	WEE2 (ENSMMMG00000011258)	SSBP1 (ENSMMMG00000011224) #22	ENSMMMG00000011214 #23	TAS2R4 (ENSMMMG00000011210) #24	ENSMMMG00000011201 #23	PRSS37 (ENSMMMG00000011182) #25	OR9A1P (ENSMMMG00000011173) #26	OR9A4 (ENSMMMG00000011167)	CLEC5A (ENSMMMG00000011125) #27	MGAM (ENSMMMG00000010862) #29	MGAM2 (ENSMMMG00000009935)	ENSMMMG00000009899	PRSS58 (ENSMMMG00000009890)	ENSMMMG00000009883	ENSMMMG00000009748	ENSMMMG00000008868	ENSMMMG00000008499
Marmotini_b	ANCESTRAL SPECIES	117	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139.i	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401.y.a #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT00940000161540 #29
Squirrel	MODERN SPECIES	192	CLEC2L (ENSSTOG00000021797)	HIPK2 (ENSSTOG00000005957)	TBXAS1 (ENSSTOG00000004552)	PARP12 (ENSSTOG00000004578) #7	KDM7A (ENSSTOG00000012789) #8	ENSSTOG00000010929	ENSSTOG00000031161 ##11	DENND2A (ENSSTOG00000002912) #12	ADCK2 (ENSSTOG00000002559) #13	NDUFB2 (ENSSTOG00000002566) #14	BRAF (ENSSTOG00000002569) #15	ENSSTOG00000001019 #17	TMEM178B (ENSSTOG00000023428) #18	AGK (ENSSTOG00000020008) #19	DENND11 (ENSSTOG00000006980) #20	SSBP1 (ENSSTOG00000007007) #22	PRSS37 (ENSSTOG00000014505) #25	OR9A4 (ENSSTOG00000028119)	CLEC5A (ENSSTOG00000015960) #27	ENSSTOG00000003319 #29
Arctic ground squirrel	MODERN SPECIES	318	PARP12 (ENSUPAG00010015611) #7	KDM7A (ENSUPAG00010015626) #8	ENSUPAG00010015737	RAB19 (ENSUPAG00010015754) #10	MKRN1 (ENSUPAG00010015763) #11	DENND2A (ENSUPAG00010015818) #12	ADCK2 (ENSUPAG00010015851) #13	NDUFB2 (ENSUPAG00010015866) #14	BRAF (ENSUPAG00010015886) #15	ENSUPAG00010015929	MRPS33 (ENSUPAG00010015943) #17	TMEM178B (ENSUPAG00010015946) #18	AGK (ENSUPAG00010015967) #19	DENND11 (ENSUPAG00010015983) #20	WEE2 (ENSUPAG00010015989)	SSBP1 (ENSUPAG00010016004) #22	ENSUPAG00010016035 #23	TAS2R4 (ENSUPAG00010016043) #24	ENSUPAG00010016047 #23	PRSS37 (ENSUPAG00010016052) #25	OR9A1P (ENSUPAG00010016064) #26	OR9A4 (ENSUPAG00010016069)	CLEC5A (ENSUPAG00010016074) #27	MGAM (ENSUPAG00010016104) #29
Eurasian red squirrel	MODERN SPECIES	17	KDM7A (ENSSVLG00005012470) #8	ENSSVLG00005012379	RAB19 (ENSSVLG00005012313) #10	ENSSVLG00005012241 ##11	ENSSVLG00005012011 #11	DENND2A (ENSSVLG00005011668) #12	ADCK2 (ENSSVLG00005011400) #13	NDUFB2 (ENSSVLG00005011276) #14	BRAF (ENSSVLG00005011137) #15	ENSSVLG00005011057	MRPS33 (ENSSVLG00005011000) #17	TMEM178B (ENSSVLG00005010943) #18	AGK (ENSSVLG00005010726) #19	DENND11 (ENSSVLG00005010569) #20	ENSSVLG00005010476	SSBP1 (ENSSVLG00005010423) #22	ENSSVLG00005010410 #23	ENSSVLG00005010344 #23	PRSS37 (ENSSVLG00005010291) #25	OR9A1P (ENSSVLG00005010283) #26	OR9A4 (ENSSVLG00005010273)	CLEC5A (ENSSVLG00005010134) #27	TAS2R38 (ENSSVLG00005010093) #28	MGAM (ENSSVLG00005009048) #29	ENSSVLG00005008783	ENSSVLG00005008706	PRSS58 (ENSSVLG00005017027)	ENSSVLG00005016942	ENSSVLG00005016228	ENSSVLG00005016073	ENSSVLG00005015340
Hystricomorpha	ANCESTRAL SPECIES	35	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163043	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000154460.a	ENSGT00940000163545.a
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	6	ENSHGLG00000005137	PLCB1 (ENSHGLG00000017610)	ENSHGLG00000044330	PLCB4 (ENSHGLG00000018217)	LAMP5 (ENSHGLG00000036148)	ENSHGLG00000032981	PAK5 (ENSHGLG00000016050)	ENSHGLG00000046856	ANKEF1 (ENSHGLG00000017245)	ENSHGLG00000016926	ENSHGLG00000033517	ISM1 (ENSHGLG00000043849)	TASP1 (ENSHGLG00000016276)	ESF1 (ENSHGLG00000011505)	NDUFAF5 (ENSHGLG00000012482)	ENSHGLG00000021400 #22	ENSHGLG00000017747	ENSHGLG00000037190	FLRT3 (ENSHGLG00000016173)	ENSHGLG00000032467	ENSHGLG00000017926	ENSHGLG00000016849	SNRPB2 (ENSHGLG00000006969)	OTOR (ENSHGLG00000008576)	ENSHGLG00000005046	ENSHGLG00000020281	ENSHGLG00000018289	BANF2 (ENSHGLG00000015254)	SNX5 (ENSHGLG00000017606)	OVOL2 (ENSHGLG00000045118)	PET117 (ENSHGLG00000016254)
Naked mole-rat female	MODERN SPECIES	17	ENSHGLG00000009494	RAB19 (ENSHGLG00000010948) #10	ENSHGLG00000044578 ##11	ENSHGLG00000040747	ENSHGLG00000043500	DENND2A (ENSHGLG00000014310) #12	ADCK2 (ENSHGLG00000037504) #13	ENSHGLG00000017933 #14	BRAF (ENSHGLG00000014168) #15	ENSHGLG00000049810	ENSHGLG00000040990 #17	TMEM178B (ENSHGLG00000043245) #18	AGK (ENSHGLG00000046237) #19	DENND11 (ENSHGLG00000010322) #20	ENSHGLG00000011701	ENSHGLG00000009362 #22	TAS2R4 (ENSHGLG00000039087) #24	PRSS37 (ENSHGLG00000006169) #25	CLEC5A (ENSHGLG00000041574) #27	TAS2R38 (ENSHGLG00000008887) #28	MGAM (ENSHGLG00000009763) #29	ENSHGLG00000036048 #29	ENSHGLG00000012020	ENSHGLG00000004421	ENSHGLG00000006188	SEMA4D (ENSHGLG00000007257)	ENSHGLG00000008542	ENSHGLG00000014380	CKS2 (ENSHGLG00000008721)	SHC3 (ENSHGLG00000009124)	ENSHGLG00000032550
Hystricomorpha_a	ANCESTRAL SPECIES	40	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b	ENSGT00940000163545.a	ENSGT00940000162480.b
Guinea pig	MODERN SPECIES	10	TBXAS1 (ENSCPOG00000000064)	PARP12 (ENSCPOG00000011210) #7	KDM7A (ENSCPOG00000011219) #8	ENSCPOG00000003740	RAB19 (ENSCPOG00000031937) #10	MKRN1 (ENSCPOG00000000948) ##11	DENND2A (ENSCPOG00000030550) #12	ADCK2 (ENSCPOG00000031703) #13	NDUFB2 (ENSCPOG00000025368) #14	BRAF (ENSCPOG00000021487) #15	MRPS33 (ENSCPOG00000038792) #17	ENSCPOG00000020150 #18	AGK (ENSCPOG00000015447) #19	DENND11 (ENSCPOG00000015452) #20	ENSCPOG00000025291	SSBP1 (ENSCPOG00000040289) #22	TAS2R3 (ENSCPOG00000007635) #23	TAS2R4 (ENSCPOG00000026813) #24	PRSS37 (ENSCPOG00000004461) #25	CLEC5A (ENSCPOG00000039585) #27	MGAM (ENSCPOG00000011280) #29	ENSCPOG00000039963	MGAM2 (ENSCPOG00000009935)	PRSS58 (ENSCPOG00000006756)	ENSCPOG00000021713	ENSCPOG00000026673	ENSCPOG00000010598	ENSCPOG00000025586	ENSCPOG00000032580	ENSCPOG00000038762	ENSCPOG00000038847
Hystricomorpha_b	ANCESTRAL SPECIES	40	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT00940000161483 #25	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b	ENSGT01050000244883.A.a.a.b.x.m	ENSGT00940000156687.g	ENSGT00940000160399.d	ENSGT00940000161809
Degu	DUPLICATION
Degu	MODERN SPECIES	84	FAM107A (ENSODEG00000009417)	ACOX2 (ENSODEG00000009665)	KCTD6 (ENSODEG00000009456)	PDHB (ENSODEG00000011071)	PXK (ENSODEG00000009061)	ENSODEG00000010715	ABHD6 (ENSODEG00000008297)	ENSODEG00000010685	METTL6 (ENSODEG00000008650)	EAF1 (ENSODEG00000008752)	COLQ (ENSODEG00000009333)	HACL1 (ENSODEG00000007866)	ENSODEG00000019451	SH3BP5 (ENSODEG00000013984)	CAPN7 (ENSODEG00000009154)	ENSODEG00000008798 #22	DNAH1 (ENSODEG00000008443)	BAP1 (ENSODEG00000008927)	PHF7 (ENSODEG00000008416)	SEMA3G (ENSODEG00000010653)	ENSODEG00000010480	NISCH (ENSODEG00000007768)	ENSODEG00000007867	ENSODEG00000008276	NT5DC2 (ENSODEG00000008156)	UQCC5 (ENSODEG00000007436)	ENSODEG00000019639	ENSODEG00000009139	PBRM1 (ENSODEG00000008265)	GNL3 (ENSODEG00000009492)	ENSODEG00000007760
Degu	MODERN SPECIES	68	ENSODEG00000014445	ENSODEG00000014675	RAB19 (ENSODEG00000013764) #10	ENSODEG00000013658 ##11	ENSODEG00000013390 #12	ENSODEG00000014071 #13	NDUFB2 (ENSODEG00000013607) #14	BRAF (ENSODEG00000013401) #15	ENSODEG00000012846	ENSODEG00000014878	ENSODEG00000013320	ENSODEG00000013547 #18	AGK (ENSODEG00000015489) #19	DENND11 (ENSODEG00000013048) #20	ENSODEG00000013142	ENSODEG00000013367 #22	PRSS37 (ENSODEG00000013473) #25	CLEC5A (ENSODEG00000013699) #27	ENSODEG00000014828 #29	ENSODEG00000013408	ENSODEG00000012690	PRSS58 (ENSODEG00000013832)	ENSODEG00000013684	ENSODEG00000012923	ENSODEG00000012554	ENSODEG00000013222	ENSODEG00000014167	ENSODEG00000012766	TRPV6 (ENSODEG00000015340)	EPHB6 (ENSODEG00000012570)	TRPV5 (ENSODEG00000014153)
Long-tailed chinchilla	MODERN SPECIES	201	SLC37A3 (ENSCLAG00000001923) #9	MKRN1 (ENSCLAG00000001783) ##11	ENSCLAG00000001763	DENND2A (ENSCLAG00000001519) #12	ADCK2 (ENSCLAG00000001471) #13	NDUFB2 (ENSCLAG00000001447) #14	ENSCLAG00000001414	ENSCLAG00000001297 #15	ENSCLAG00000001167	MRPS33 (ENSCLAG00000001134) #17	ENSCLAG00000001114 #18	AGK (ENSCLAG00000001071) #19	DENND11 (ENSCLAG00000001043) #20	ENSCLAG00000001751	WEE2 (ENSCLAG00000009356)	SSBP1 (ENSCLAG00000009247) #22	PRSS37 (ENSCLAG00000008886) #25	CLEC5A (ENSCLAG00000008820) #27	TAS2R38 (ENSCLAG00000008669) #28	ENSCLAG00000007384 #29	ENSCLAG00000003350	ENSCLAG00000003095	ENSCLAG00000003077	PRSS58 (ENSCLAG00000002996)	ENSCLAG00000001949	ENSCLAG00000001291	ENSCLAG00000001271	ENSCLAG00000001180	ENSCLAG00000001157	ENSCLAG00000001113	TRPV6 (ENSCLAG00000001066)
Lagomorpha	ANCESTRAL SPECIES	107													ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.b.x	ENSGT00940000154460.a	ENSGT00940000164097
Rabbit	DUPLICATION
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	1401	APLN (ENSOCUG00000022649)	OCRL (ENSOCUG00000016167)	SMARCA1 (ENSOCUG00000001047)	ENSOCUG00000025977	ENSOCUG00000030104	ENSOCUG00000034526	ENSOCUG00000002602	ENSOCUG00000029410	PRR32 (ENSOCUG00000015056)	ENSOCUG00000000908	ENSOCUG00000010499	ENSOCUG00000006392	ENSOCUG00000023025	TENM1 (ENSOCUG00000005013)	SH2D1A (ENSOCUG00000005012)	ENSOCUG00000022591 #22	STAG2 (ENSOCUG00000009879)	ENSOCUG00000009878	THOC2 (ENSOCUG00000005996)	GRIA3 (ENSOCUG00000000315)	ENSOCUG00000021549	ENSOCUG00000027726	C1GALT1C1 (ENSOCUG00000004781)	ENSOCUG00000014315	CUL4B (ENSOCUG00000015633)	ENSOCUG00000027764	LAMP2 (ENSOCUG00000024954)	ATP1B4 (ENSOCUG00000003951)	TMEM255A (ENSOCUG00000004334)	ZBTB33 (ENSOCUG00000004331)	ENSOCUG00000029262
Rabbit	MODERN SPECIES	18	MDFIC (ENSOCUG00000012455)	TFEC (ENSOCUG00000006292)	TES (ENSOCUG00000008491)	CAV2 (ENSOCUG00000014515)	CAV1 (ENSOCUG00000014520)	MET (ENSOCUG00000013060)	ST7 (ENSOCUG00000016156)	WNT2 (ENSOCUG00000016173)	ASZ1 (ENSOCUG00000015962)	CFTR (ENSOCUG00000010733)	ENSOCUG00000038182	CTTNBP2 (ENSOCUG00000001386)	LSM8 (ENSOCUG00000017359)	ENSOCUG00000021922	ENSOCUG00000032257	ENSOCUG00000023965 #22	ENSOCUG00000037642	KCND2 (ENSOCUG00000004149)	TSPAN12 (ENSOCUG00000001875)	ENSOCUG00000034467	ING3 (ENSOCUG00000001881)	CPED1 (ENSOCUG00000005778)	WNT16 (ENSOCUG00000014744)	FAM3C (ENSOCUG00000003351)	PTPRZ1 (ENSOCUG00000013209)	AASS (ENSOCUG00000013237)	FEZF1 (ENSOCUG00000021285)	ENSOCUG00000039223	ENSOCUG00000033009	CADPS2 (ENSOCUG00000007425)	TAS2R16 (ENSOCUG00000017889) ##28
Rabbit	MODERN SPECIES	491													ENSOCUG00000022873 #18	DENND11 (ENSOCUG00000017559) #20	WEE2 (ENSOCUG00000026396)	ENSOCUG00000003799 #22	TAS2R3 (ENSOCUG00000003800) #23	TAS2R4 (ENSOCUG00000003805) #24	PRSS37 (ENSOCUG00000006129) #25	ENSOCUG00000022171	ENSOCUG00000037719	CLEC5A (ENSOCUG00000009582) #27	ENSOCUG00000031008 #28	MGAM (ENSOCUG00000008177) #29	ENSOCUG00000000872	ENSOCUG00000000387	ENSOCUG00000025914	PRSS58 (ENSOCUG00000000389)	ENSOCUG00000000393	ENSOCUG00000025211	ENSOCUG00000026000
Pika	MODERN SPECIES	1889													AGK (ENSOPRG00000012230) #19	DENND11 (ENSOPRG00000012249) #20	WEE2 (ENSOPRG00000009103)	SSBP1 (ENSOPRG00000003195) #22	TAS2R4 (ENSOPRG00000009115) #24	PRSS37 (ENSOPRG00000009119) #25
Primates	ANCESTRAL SPECIES	12	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l
Strepsirrhini	ANCESTRAL SPECIES	9	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000162509
Lemuriformes	ANCESTRAL SPECIES	4	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b.ib ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401.m #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000162509	ENSGT00940000154270.a.b
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	2	KDM7A (ENSMICG00000003175) #8	SLC37A3 (ENSMICG00000015980) #9	RAB19 (ENSMICG00000006614) #10	MKRN1 (ENSMICG00000002114) ##11	DENND2A (ENSMICG00000002120) #12	ADCK2 (ENSMICG00000005086) #13	ENSMICG00000005092 #14	BRAF (ENSMICG00000005096) #15	MRPS33 (ENSMICG00000029049) #17	ENSMICG00000028298	ENSMICG00000036507	TMEM178B (ENSMICG00000027101) #18	ENSMICG00000002561 #19	DENND11 (ENSMICG00000002570) #20	WEE2 (ENSMICG00000045942)	ENSMICG00000031317 #22	TAS2R5 (ENSMICG00000002588) ##28	PRSS37 (ENSMICG00000043681) #25	OR9A1P (ENSMICG00000047958) #26	CLEC5A (ENSMICG00000001118) #27	ENSMICG00000027436	MGAM (ENSMICG00000001123) #29	ENSMICG00000027181	ENSMICG00000001140	PRSS58 (ENSMICG00000043863)	ENSMICG00000028481	ENSMICG00000026754	TRBV15 (ENSMICG00000030792)	ENSMICG00000007358	ENSMICG00000047513	ENSMICG00000027701
Mouse lemur	MODERN SPECIES	27	TP53I11 (ENSMICG00000033784)	TSPAN18 (ENSMICG00000006504)	CD82 (ENSMICG00000010264)	ALX4 (ENSMICG00000048133)	EXT2 (ENSMICG00000014680)	ENSMICG00000028094	ACCS (ENSMICG00000007981)	ACCSL (ENSMICG00000014661)	ENSMICG00000034539	C11orf96 (ENSMICG00000041610)	ALKBH3 (ENSMICG00000014651)	HSD17B12 (ENSMICG00000014632)	TTC17 (ENSMICG00000014602)	ENSMICG00000014581	LRRC4C (ENSMICG00000047157)	ENSMICG00000043108 #22	IFTAP (ENSMICG00000008620)	TRAF6 (ENSMICG00000008604)	PRR5L (ENSMICG00000047184)	COMMD9 (ENSMICG00000008594)	LDLRAD3 (ENSMICG00000008590)	TRIM44 (ENSMICG00000008587)	FJX1 (ENSMICG00000033879)	PAMR1 (ENSMICG00000003733)	SLC1A2 (ENSMICG00000003719)	CD44 (ENSMICG00000003713)	ENSMICG00000036406	PDHX (ENSMICG00000003700)	APIP (ENSMICG00000003696)	EHF (ENSMICG00000003694)	ENSMICG00000038699
Lemuriformes_a	ANCESTRAL SPECIES	51	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b.ib ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401.m #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000162509	ENSGT00940000154270.a.b	ENSGT00940000154270.a.a
Greater bamboo lemur	MODERN SPECIES	70	SLC37A3 (ENSPSMG00000006206) #9	RAB19 (ENSPSMG00000006175) #10	ENSPSMG00000006161 ##11	ENSPSMG00000006137	DENND2A (ENSPSMG00000006080) #12	ADCK2 (ENSPSMG00000006015) #13	ENSPSMG00000006007	NDUFB2 (ENSPSMG00000005977) #14	BRAF (ENSPSMG00000005759) #15	ENSPSMG00000005632 #17	ENSPSMG00000005629	TMEM178B (ENSPSMG00000005625) #18	AGK (ENSPSMG00000005473) #19	DENND11 (ENSPSMG00000005424) #20	WEE2 (ENSPSMG00000005416)	SSBP1 (ENSPSMG00000005385) #22	TAS2R3 (ENSPSMG00000005351) #23	TAS2R4 (ENSPSMG00000005349) #24	PRSS37 (ENSPSMG00000005348) #25	OR9A1P (ENSPSMG00000005343) #26	OR9A4 (ENSPSMG00000005339)	CLEC5A (ENSPSMG00000005337) #27	TAS2R38 (ENSPSMG00000005320) #28	ENSPSMG00000005316	MGAM (ENSPSMG00000005298) #29	PRSS58 (ENSPSMG00000005244)	ENSPSMG00000005238	ENSPSMG00000005226	ENSPSMG00000005215	ENSPSMG00000005211	TRBV9 (ENSPSMG00000005204)
Coquerels sifaka	MODERN SPECIES	430	ENSPCOG00000016270	SLC37A3 (ENSPCOG00000014061) #9	RAB19 (ENSPCOG00000019113) #10	ENSPCOG00000002890 ##11	ENSPCOG00000023686	DENND2A (ENSPCOG00000012423) #12	ADCK2 (ENSPCOG00000019938) #13	ENSPCOG00000018417	NDUFB2 (ENSPCOG00000008454) #14	BRAF (ENSPCOG00000024467) #15	ENSPCOG00000015683 #17	TMEM178B (ENSPCOG00000020472) #18	AGK (ENSPCOG00000025807) #19	DENND11 (ENSPCOG00000005094) #20	WEE2 (ENSPCOG00000016620)	SSBP1 (ENSPCOG00000021009) #22	PRSS37 (ENSPCOG00000020043) #25	ENSPCOG00000027867 #27	MGAM (ENSPCOG00000014465) #29
Bushbaby	MODERN SPECIES	164	TBXAS1 (ENSOGAG00000008899)	PARP12 (ENSOGAG00000008906) #7	KDM7A (ENSOGAG00000007678) #8	SLC37A3 (ENSOGAG00000029064) #9	RAB19 (ENSOGAG00000009876) #10	MKRN1 (ENSOGAG00000009877) #11	DENND2A (ENSOGAG00000031447) #12	ADCK2 (ENSOGAG00000009639) #13	NDUFB2 (ENSOGAG00000009644) #14	BRAF (ENSOGAG00000009646) #15	MRPS33 (ENSOGAG00000017200) #17	ENSOGAG00000027045 #18	AGK (ENSOGAG00000016647) #19	DENND11 (ENSOGAG00000016654) #20	ENSOGAG00000032705	SSBP1 (ENSOGAG00000016661) #22	TAS2R3 (ENSOGAG00000034844) #23	PRSS37 (ENSOGAG00000016666) #25	OR9A1P (ENSOGAG00000025142) #26	OR9A4 (ENSOGAG00000029429)	CLEC5A (ENSOGAG00000011563) #27	TAS2R38 (ENSOGAG00000011567) #28	MGAM (ENSOGAG00000026892) #29	ENSOGAG00000032017	ENSOGAG00000011568	ENSOGAG00000011575	PRSS58 (ENSOGAG00000011579)	ENSOGAG00000029218	ENSOGAG00000029366	ENSOGAG00000027692	ENSOGAG00000024305
Haplorrhini	ANCESTRAL SPECIES	8	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000154460.a
Simiiformes	ANCESTRAL SPECIES	12	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00910000146873	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT00940000162509.f	ENSGT01050000244883.A.a.a.a.b.l
Catarrhini	ANCESTRAL SPECIES	6	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154.a #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961.c.a #19	ENSGT00910000146873	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT00940000162509.f	ENSGT00940000164097
Cercopithecidae	ANCESTRAL SPECIES	11	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154.a #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961.c.a #19	ENSGT00910000146873	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT00940000162509.f	ENSGT00940000154460.a.r.a	ENSGT00940000164097
Rhinopithecus	ANCESTRAL SPECIES	141					ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154.a #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961.c.a.c #19	ENSGT00910000146873	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000154460.a.r.a	ENSGT00940000164097	ENSGT00940000154460.b.e.a.b	ENSGT00940000154270.a.a	ENSGT00940000154542.b.b.k	ENSGT00940000154270.a.b.e.a.a.a.a.a
Black snub-nosed monkey	MODERN SPECIES	1030				MKRN1 (ENSRBIG00000027680) #11	DENND2A (ENSRBIG00000033715) #12	ADCK2 (ENSRBIG00000034656) #13	NDUFB2 (ENSRBIG00000019926) #14	BRAF (ENSRBIG00000034807) #15	ENSRBIG00000029491	MRPS33 (ENSRBIG00000009406) #17	TMEM178B (ENSRBIG00000021689) #18	AGK (ENSRBIG00000032192) #19	ENSRBIG00000000681	DENND11 (ENSRBIG00000000540) #20	WEE2 (ENSRBIG00000031199)	SSBP1 (ENSRBIG00000028396) #22	TAS2R5 (ENSRBIG00000006452) ##28	PRSS37 (ENSRBIG00000038319) #25	OR9A4 (ENSRBIG00000031832)	CLEC5A (ENSRBIG00000018399) #27	MGAM (ENSRBIG00000027925) #29	MGAM2 (ENSRBIG00000029407)	ENSRBIG00000032600	PRSS58 (ENSRBIG00000040803)	ENSRBIG00000041017	TRBV2 (ENSRBIG00000031390)	TRBV3-1 (ENSRBIG00000041947)	TRBV7-3 (ENSRBIG00000019786)	TRBV9 (ENSRBIG00000010651)	TRBV10-1 (ENSRBIG00000007349)	TRBV7-4 (ENSRBIG00000037535)
Golden snub-nosed monkey	MODERN SPECIES	843				MKRN1 (ENSRROG00000037557) #11	DENND2A (ENSRROG00000034382) #12	ADCK2 (ENSRROG00000044522) #13	NDUFB2 (ENSRROG00000029902) #14	BRAF (ENSRROG00000010145) #15	ENSRROG00000012111	MRPS33 (ENSRROG00000036028) #17	TMEM178B (ENSRROG00000039953) #18	ENSRROG00000033402 #19	ENSRROG00000021882	DENND11 (ENSRROG00000031612) #20	WEE2 (ENSRROG00000013594)	SSBP1 (ENSRROG00000029359) #22	TAS2R5 (ENSRROG00000019559) ##28	PRSS37 (ENSRROG00000039139) #25	OR9A4 (ENSRROG00000010627)	CLEC5A (ENSRROG00000039465) #27	ENSRROG00000038256 #29
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154.a #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961.c.a #19	ENSGT00910000146873	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT00940000162509.f	ENSGT00940000154460.a.r.a.b	ENSGT00940000164097
Vervet Monkey	MODERN SPECIES	13	KDM7A (ENSCSAG00000008271) #8	ENSCSAG00000019149	SLC37A3 (ENSCSAG00000008259) #9	RAB19 (ENSCSAG00000008251) #10	MKRN1 (ENSCSAG00000008246) #11	DENND2A (ENSCSAG00000008235) #12	ADCK2 (ENSCSAG00000008230) #13	NDUFB2 (ENSCSAG00000008224) #14	BRAF (ENSCSAG00000008218) #15	MRPS33 (ENSCSAG00000008211) #17	ENSCSAG00000008209 #18	ENSCSAG00000008203 #18	AGK (ENSCSAG00000008178) #19	DENND11 (ENSCSAG00000008128) #20	WEE2 (ENSCSAG00000008117)	SSBP1 (ENSCSAG00000008102) #22	TAS2R3 (ENSCSAG00000019150) #23	TAS2R4 (ENSCSAG00000019151) #24	TAS2R5 (ENSCSAG00000019152) ##28	PRSS37 (ENSCSAG00000008093) #25	CLEC5A (ENSCSAG00000008078) #27	TAS2R38 (ENSCSAG00000019153) #28	MGAM (ENSCSAG00000008027) #29	ENSCSAG00000007937	ENSCSAG00000007921	PRSS58 (ENSCSAG00000007906)	ENSCSAG00000007896	ENSCSAG00000019154	ENSCSAG00000007880	TRBV3-1 (ENSCSAG00000007874)	ENSCSAG00000007869
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154.a #15	ENSGT00390000011401.k.a #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961.c.a #19	ENSGT00910000146873	ENSGT00910000147594	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT00940000162509.f	ENSGT00940000154460.a.r.a.b.b	ENSGT00940000164097	ENSGT00940000162509.e.a.e
Cercopithecinae_b	ANCESTRAL SPECIES	11	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154.a #15	ENSGT00390000011401.k.b #17	ENSGT00390000011401.k.a #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961.c.a #19	ENSGT00910000146873	ENSGT00910000147594	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT00940000154460.a.r.a.b.a	ENSGT00940000154460.a.r.b	ENSGT00940000154542.b.a.k.b.b	ENSGT00940000154460.b.e.a.b
Olive baboon	MODERN SPECIES	14	PARP12 (ENSPANG00000022225) #7	KDM7A (ENSPANG00000011491) #8	SLC37A3 (ENSPANG00000007700) #9	RAB19 (ENSPANG00000032483) #10	MKRN1 (ENSPANG00000017280) #11	DENND2A (ENSPANG00000018260) #12	ADCK2 (ENSPANG00000007837) #13	NDUFB2 (ENSPANG00000022006) #14	BRAF (ENSPANG00000004965) #15	MRPS33 (ENSPANG00000048937) #17	TMEM178B (ENSPANG00000029596) #18	ENSPANG00000051109	AGK (ENSPANG00000001222) #19	DENND11 (ENSPANG00000001223) #20	WEE2 (ENSPANG00000008933)	SSBP1 (ENSPANG00000009820) #22	TAS2R3 (ENSPANG00000037537) #23	TAS2R4 (ENSPANG00000037718) #24	TAS2R5 (ENSPANG00000047103) ##28	PRSS37 (ENSPANG00000016705) #25	OR9A1P (ENSPANG00000048516) #26	CLEC5A (ENSPANG00000016706) #27	TAS2R38 (ENSPANG00000010961) #28	ENSPANG00000038896	PRSS58 (ENSPANG00000016708)	ENSPANG00000048652	TRBV5-1 (ENSPANG00000042759)	TRBV7-2 (ENSPANG00000044070)	TRBV7-3 (ENSPANG00000039849)	TRBV9 (ENSPANG00000034082)	TRBV10-1 (ENSPANG00000048649)
Cercopithecinae_d	ANCESTRAL SPECIES	25	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154.a #15	ENSGT00390000011401.k.a #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961.c.a #19	ENSGT00910000146873	ENSGT00910000147594	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b	ENSGT00940000162509.f	ENSGT00940000154460.a.r.a.b.b	ENSGT00940000154460.a.r.a.a	ENSGT00940000154460.a.r.a.b.a	ENSGT00940000154460.a.r.b	ENSGT00940000154542.b.a.k.b.b	ENSGT00940000154460.b.e.a.b	ENSGT00940000154270.a.a
Drill	MODERN SPECIES	1178	KDM7A (ENSMLEG00000039850) #8	SLC37A3 (ENSMLEG00000034527) #9	RAB19 (ENSMLEG00000032277) #10	MKRN1 (ENSMLEG00000033107) #11	DENND2A (ENSMLEG00000040269) #12	ADCK2 (ENSMLEG00000038169) #13	NDUFB2 (ENSMLEG00000034682) #14	BRAF (ENSMLEG00000041508) #15	ENSMLEG00000043989 #17	TMEM178B (ENSMLEG00000030888) #18	AGK (ENSMLEG00000043143) #19	ENSMLEG00000011841	ENSMLEG00000029548	DENND11 (ENSMLEG00000035429) #20	WEE2 (ENSMLEG00000023635)	SSBP1 (ENSMLEG00000039541) #22	PRSS37 (ENSMLEG00000039528) #25	CLEC5A (ENSMLEG00000014115) #27	TAS2R38 (ENSMLEG00000011241) #28	MGAM (ENSMLEG00000028247) #29
Sooty mangabey	MODERN SPECIES	148	PARP12 (ENSCATG00000029372) #7	KDM7A (ENSCATG00000031213) #8	SLC37A3 (ENSCATG00000039038) #9	RAB19 (ENSCATG00000029739) #10	MKRN1 (ENSCATG00000039778) #11	DENND2A (ENSCATG00000035508) #12	ADCK2 (ENSCATG00000029766) #13	NDUFB2 (ENSCATG00000022754) #14	BRAF (ENSCATG00000034341) #15	MRPS33 (ENSCATG00000026661) #17	TMEM178B (ENSCATG00000044426) #18	AGK (ENSCATG00000043619) #19	ENSCATG00000000122	DENND11 (ENSCATG00000036082) #20	WEE2 (ENSCATG00000007238)	SSBP1 (ENSCATG00000035429) #22	PRSS37 (ENSCATG00000040618) #25	OR9A1P (ENSCATG00000018573) #26	CLEC5A (ENSCATG00000040577) #27	TAS2R38 (ENSCATG00000018198) #28	MGAM (ENSCATG00000040266) #29	MGAM2 (ENSCATG00000032547)	PRSS58 (ENSCATG00000018483)	ENSCATG00000019590	ENSCATG00000018350	ENSCATG00000018560
Macaca	ANCESTRAL SPECIES	3	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154.a #15	ENSGT00390000011401.k.a #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961.c.a #19	ENSGT00910000146873	ENSGT00910000147594	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT00940000162509.f	ENSGT00940000154460.a.r.a.b.b	ENSGT00940000162509.e.a.e	ENSGT00940000154460.a.r.a.a
Pig-tailed macaque	MODERN SPECIES	479	KDM7A (ENSMNEG00000028468) #8	SLC37A3 (ENSMNEG00000044880) #9	RAB19 (ENSMNEG00000043765) #10	MKRN1 (ENSMNEG00000040268) #11	DENND2A (ENSMNEG00000036269) #12	ADCK2 (ENSMNEG00000031935) #13	NDUFB2 (ENSMNEG00000044806) #14	BRAF (ENSMNEG00000024672) #15	MRPS33 (ENSMNEG00000044224) #17	TMEM178B (ENSMNEG00000028782) #18	AGK (ENSMNEG00000029923) #19	ENSMNEG00000003382	ENSMNEG00000001410	DENND11 (ENSMNEG00000034919) #20	WEE2 (ENSMNEG00000032770)	SSBP1 (ENSMNEG00000034892) #22	PRSS37 (ENSMNEG00000045224) #25	CLEC5A (ENSMNEG00000039445) #27	TAS2R38 (ENSMNEG00000003977) #28	MGAM (ENSMNEG00000032400) #29	MGAM2 (ENSMNEG00000040988)	PRSS58 (ENSMNEG00000036745)	ENSMNEG00000030226	ENSMNEG00000008461	ENSMNEG00000013561	TRBV7-3 (ENSMNEG00000044967)	TRBV9 (ENSMNEG00000017269)	TRBV10-1 (ENSMNEG00000010145)	ENSMNEG00000037773	ENSMNEG00000008940	ENSMNEG00000044591
Macaca_a	ANCESTRAL SPECIES	7	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154.a #15	ENSGT00390000011401.k.b #17	ENSGT00390000011401.k.a #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961.c.a #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT00940000162509.f	ENSGT00940000154460.a.r.a.b.b	ENSGT00940000162509.e.a.e	ENSGT00940000154460.a.r.a.a
Rhesus	MODERN SPECIES	13	PARP12 (ENSMMUG00000004224) #7	KDM7A (ENSMMUG00000008126) #8	ENSMMUG00000053674	SLC37A3 (ENSMMUG00000015870) #9	RAB19 (ENSMMUG00000010419) #10	MKRN1 (ENSMMUG00000010420) #11	DENND2A (ENSMMUG00000042299) #12	ADCK2 (ENSMMUG00000015282) #13	NDUFB2 (ENSMMUG00000015284) #14	BRAF (ENSMMUG00000042793) #15	MRPS33 (ENSMMUG00000050535) #17	TMEM178B (ENSMMUG00000041051) #18	AGK (ENSMMUG00000021017) #19	DENND11 (ENSMMUG00000039865) #20	WEE2 (ENSMMUG00000044167)	SSBP1 (ENSMMUG00000022442) #22	TAS2R3 (ENSMMUG00000059165) #23	TAS2R4 (ENSMMUG00000022439) #24	TAS2R5 (ENSMMUG00000056110) ##28	PRSS37 (ENSMMUG00000053855) #25	OR9A4 (ENSMMUG00000042443)	CLEC5A (ENSMMUG00000016271) #27	TAS2R38 (ENSMMUG00000055710) #28	MGAM (ENSMMUG00000016273) #29	MGAM2 (ENSMMUG00000019937)	PRSS58 (ENSMMUG00000005931)	ENSMMUG00000039273	ENSMMUG00000060990	ENSMMUG00000061142	ENSMMUG00000020332	ENSMMUG00000060238
Crab-eating macaque	MODERN SPECIES	13	ENSMFAG00000055772	SLC37A3 (ENSMFAG00000038757) #9	RAB19 (ENSMFAG00000003529) #10	MKRN1 (ENSMFAG00000000737) #11	DENND2A (ENSMFAG00000043828) #12	ENSMFAG00000048196	ADCK2 (ENSMFAG00000007386) #13	NDUFB2 (ENSMFAG00000048116) #14	BRAF (ENSMFAG00000001069) #15	ENSMFAG00000057380	MRPS33 (ENSMFAG00000032116) #17	TMEM178B (ENSMFAG00000043984) #18	AGK (ENSMFAG00000039906) #19	DENND11 (ENSMFAG00000002632) #20	WEE2 (ENSMFAG00000038833)	SSBP1 (ENSMFAG00000032819) #22	TAS2R3 (ENSMFAG00000063716) #23	TAS2R4 (ENSMFAG00000061404) #24	TAS2R5 (ENSMFAG00000057048) ##28	PRSS37 (ENSMFAG00000033856) #25	OR9A4 (ENSMFAG00000042777)	CLEC5A (ENSMFAG00000036311) #27	TAS2R38 (ENSMFAG00000059261) #28	MGAM (ENSMFAG00000000048) #29	MGAM2 (ENSMFAG00000040766)	PRSS58 (ENSMFAG00000040057)	ENSMFAG00000039259	ENSMFAG00000065633	ENSMFAG00000059294	ENSMFAG00000048982	ENSMFAG00000055769
Hominoidea	ANCESTRAL SPECIES	6	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154.a #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961.c.a #19	ENSGT00910000146873	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT00940000164097.f.b	ENSGT00940000162509.e.a	ENSGT00940000154270.a.b.e.b
Gibbon	MODERN SPECIES	3	PARP12 (ENSNLEG00000001802) #7	KDM7A (ENSNLEG00000001833) #8	SLC37A3 (ENSNLEG00000001879) #9	RAB19 (ENSNLEG00000030911) #10	MKRN1 (ENSNLEG00000001921) #11	DENND2A (ENSNLEG00000002026) #12	ADCK2 (ENSNLEG00000002068) #13	NDUFB2 (ENSNLEG00000035760) #14	BRAF (ENSNLEG00000002139) #15	MRPS33 (ENSNLEG00000002278) #17	TMEM178B (ENSNLEG00000029749) #18	AGK (ENSNLEG00000002291) #19	ENSNLEG00000027915	DENND11 (ENSNLEG00000030404) #20	WEE2 (ENSNLEG00000002356)	SSBP1 (ENSNLEG00000002361) #22	TAS2R3 (ENSNLEG00000018419) #23	PRSS37 (ENSNLEG00000002371) #25	OR9A4 (ENSNLEG00000002393)	CLEC5A (ENSNLEG00000002394) #27	TAS2R38 (ENSNLEG00000018421) #28	MGAM (ENSNLEG00000002429) #29	MGAM2 (ENSNLEG00000002615)	PRSS58 (ENSNLEG00000002623)	ENSNLEG00000028355	ENSNLEG00000035493	ENSNLEG00000035397	ENSNLEG00000032489	ENSNLEG00000031773	ENSNLEG00000034334	ENSNLEG00000034777
Hominidae	ANCESTRAL SPECIES	11	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154.a #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961.c.a #19	ENSGT00910000146873	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT00940000164097.f.b	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000154460.a
Orangutan	MODERN SPECIES	20	TBXAS1 (ENSPPYG00000018052)	PARP12 (ENSPPYG00000018053) #7	KDM7A (ENSPPYG00000018054) #8	SLC37A3 (ENSPPYG00000018055) #9	RAB19 (ENSPPYG00000018056) #10	MKRN1 (ENSPPYG00000018057) #11	DENND2A (ENSPPYG00000018058) #12	ADCK2 (ENSPPYG00000018059) #13	NDUFB2 (ENSPPYG00000018060) #14	BRAF (ENSPPYG00000018061) #15	MRPS33 (ENSPPYG00000036255) #17	TMEM178B (ENSPPYG00000029744) #18	AGK (ENSPPYG00000018064) #19	DENND11 (ENSPPYG00000033394) #20	WEE2 (ENSPPYG00000018066)	SSBP1 (ENSPPYG00000018068) #22	TAS2R3 (ENSPPYG00000018069) #23	TAS2R4 (ENSPPYG00000035803) #24	TAS2R5 (ENSPPYG00000018267) ##28	PRSS37 (ENSPPYG00000018071) #25	CLEC5A (ENSPPYG00000018072) #27	ENSPPYG00000018074 #29	MGAM2 (ENSPPYG00000018075)	PRSS58 (ENSPPYG00000018076)	ENSPPYG00000040295	ENSPPYG00000030426	ENSPPYG00000038450	ENSPPYG00000030363	ENSPPYG00000037063	ENSPPYG00000037561	ENSPPYG00000038711
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	15	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154.a #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961.c.a #19	ENSGT00910000146873	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000154460.a	ENSGT00940000164097.f.a	ENSGT00940000162509.e.a
Gorilla	MODERN SPECIES	20	PARP12 (ENSGGOG00000000828) #7	KDM7A (ENSGGOG00000003842) #8	SLC37A3 (ENSGGOG00000011497) #9	RAB19 (ENSGGOG00000000615) #10	ENSGGOG00000023977 ##11	DENND2A (ENSGGOG00000011405) #12	ADCK2 (ENSGGOG00000012327) #13	ENSGGOG00000024622	BRAF (ENSGGOG00000017089) #15	MRPS33 (ENSGGOG00000009563) #17	TMEM178B (ENSGGOG00000025163) #18	AGK (ENSGGOG00000008821) #19	ENSGGOG00000037770	DENND11 (ENSGGOG00000008828) #20	WEE2 (ENSGGOG00000009609)	SSBP1 (ENSGGOG00000009615) #22	TAS2R3 (ENSGGOG00000009618) #23	TAS2R4 (ENSGGOG00000023731) #24	TAS2R5 (ENSGGOG00000009622) ##28	PRSS37 (ENSGGOG00000010592) #25	OR9A4 (ENSGGOG00000006400)	CLEC5A (ENSGGOG00000006401) #27	TAS2R38 (ENSGGOG00000000269) #28	MGAM (ENSGGOG00000003832) #29	MGAM2 (ENSGGOG00000010479)	PRSS58 (ENSGGOG00000008370)	ENSGGOG00000038309	ENSGGOG00000042183	ENSGGOG00000043553	TRBV4-2 (ENSGGOG00000026368)	TRBV7-3 (ENSGGOG00000006487)
Homo/Pan group	ANCESTRAL SPECIES	15	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154.a #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961.c.a #19	ENSGT00910000146873	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b	ENSGT00940000154460.a	ENSGT00940000164097.f.a	ENSGT00940000162509.e.a	ENSGT00940000154270.a.b.e.b
Human	MODERN SPECIES	19	TBXAS1 (ENSG00000059377)	PARP12 (ENSG00000059378) #7	KDM7A (ENSG00000006459) #8	SLC37A3 (ENSG00000157800) #9	RAB19 (ENSG00000146955) #10	MKRN1 (ENSG00000133606) #11	DENND2A (ENSG00000146966) #12	ADCK2 (ENSG00000133597) #13	NDUFB2 (ENSG00000090266) #14	BRAF (ENSG00000157764) #15	MRPS33 (ENSG00000090263) #17	TMEM178B (ENSG00000261115) #18	AGK (ENSG00000006530) #19	DENND11 (ENSG00000257093) #20	WEE2 (ENSG00000214102)	SSBP1 (ENSG00000106028) #22	TAS2R3 (ENSG00000127362) #23	TAS2R4 (ENSG00000127364) #24	TAS2R5 (ENSG00000127366) ##28	PRSS37 (ENSG00000165076) #25	OR9A1P (ENSG00000237621) #26	MGAM (ENSG00000257335) #29	OR9A4 (ENSG00000258083)	CLEC5A (ENSG00000258227) #27	TAS2R38 (ENSG00000257138) #28	MGAM2 (ENSG00000257743)	PRSS58 (ENSG00000258223)	TRBV2 (ENSG00000226660)	TRBV3-1 (ENSG00000237702)	TRBV4-1 (ENSG00000211710)	TRBV5-1 (ENSG00000211734)
Pan	ANCESTRAL SPECIES	13	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154.a #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961.c.a #19	ENSGT00910000146873	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b	ENSGT00940000154460.a	ENSGT00940000164097.f.a	ENSGT00940000162509.e.b.a	ENSGT00940000162509.e.b.b
Bonobo	MODERN SPECIES	20	PARP12 (ENSPPAG00000029869) #7	KDM7A (ENSPPAG00000036374) #8	SLC37A3 (ENSPPAG00000033097) #9	RAB19 (ENSPPAG00000032853) #10	MKRN1 (ENSPPAG00000040448) #11	DENND2A (ENSPPAG00000026508) #12	ADCK2 (ENSPPAG00000034476) #13	NDUFB2 (ENSPPAG00000039747) #14	BRAF (ENSPPAG00000036004) #15	MRPS33 (ENSPPAG00000043201) #17	TMEM178B (ENSPPAG00000002445) #18	AGK (ENSPPAG00000041636) #19	ENSPPAG00000029884	ENSPPAG00000043213 #20	WEE2 (ENSPPAG00000021161)	SSBP1 (ENSPPAG00000035223) #22	TAS2R3 (ENSPPAG00000006982) #23	TAS2R4 (ENSPPAG00000007093) #24	TAS2R5 (ENSPPAG00000009772) ##28	PRSS37 (ENSPPAG00000033068) #25	CLEC5A (ENSPPAG00000037590) #27	TAS2R38 (ENSPPAG00000019525) #28	MGAM (ENSPPAG00000026007) #29	MGAM2 (ENSPPAG00000034149)	PRSS58 (ENSPPAG00000042862)	ENSPPAG00000026493	ENSPPAG00000025154	ENSPPAG00000000478	ENSPPAG00000025019	TRBV7-3 (ENSPPAG00000000508)	ENSPPAG00000009837
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	20	PARP12 (ENSPTRG00000019761) #7	KDM7A (ENSPTRG00000019762) #8	SLC37A3 (ENSPTRG00000019764) #9	RAB19 (ENSPTRG00000019765) #10	MKRN1 (ENSPTRG00000019766) #11	DENND2A (ENSPTRG00000019768) #12	ADCK2 (ENSPTRG00000019770) #13	NDUFB2 (ENSPTRG00000019771) #14	BRAF (ENSPTRG00000019769) #15	MRPS33 (ENSPTRG00000019773) #17	TMEM178B (ENSPTRG00000047632) #18	AGK (ENSPTRG00000019775) #19	DENND11 (ENSPTRG00000019776) #20	ENSPTRG00000049781	WEE2 (ENSPTRG00000028383)	SSBP1 (ENSPTRG00000019778) #22	TAS2R3 (ENSPTRG00000019779) #23	TAS2R4 (ENSPTRG00000040235) #24	TAS2R5 (ENSPTRG00000019780) ##28	PRSS37 (ENSPTRG00000019781) #25	ENSPTRG00000040014	CLEC5A (ENSPTRG00000019784) #27	TAS2R38 (ENSPTRG00000019785) #28	MGAM (ENSPTRG00000019786) #29	ENSPTRG00000028382	PRSS58 (ENSPTRG00000019787)	ENSPTRG00000048550	ENSPTRG00000050465	ENSPTRG00000049536	ENSPTRG00000048217	ENSPTRG00000042693
Chimpanzee	MODERN SPECIES	579					ENSPTRG00000050561 #10	ENSPTRG00000042822 #11	ENSPTRG00000051830 #12	ENSPTRG00000047707 #13	ENSPTRG00000047330 #14	ENSPTRG00000051563 #15	ENSPTRG00000051927 #17	ENSPTRG00000045391 #18	ENSPTRG00000050750 #19	ENSPTRG00000044959	ENSPTRG00000044303 #20	ENSPTRG00000052697 #22	ENSPTRG00000050321 #23	ENSPTRG00000047526 #24	ENSPTRG00000043567 ##28	ENSPTRG00000045859 #25	OR9A1P (ENSPTRG00000043919) #26	ENSPTRG00000047806	ENSPTRG00000044670 #27	TAS2R38 (ENSPTRG00000045865) #28	ENSPTRG00000050880 #29	ENSPTRG00000048454	ENSPTRG00000044453	ENSPTRG00000051456	ENSPTRG00000048222	ENSPTRG00000044775	ENSPTRG00000043817
Platyrrhini	DUPLICATION
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	10	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401.e.a #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00910000146873	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796.q.a #22	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.e.b	ENSGT00940000162509.e.a	ENSGT00940000154270.a.b.e.b	ENSGT00940000154542.b.a
Cebidae	ANCESTRAL SPECIES	9	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401.e.a #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00910000146873	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796.q.a #22	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.e.b	ENSGT00940000162509.e.a	ENSGT00940000154270.a.b.e.b	ENSGT00940000154542.b.a
Cebidae_a	ANCESTRAL SPECIES	33	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401.e.a #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00910000146873	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796.q.a #22	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT01050000244883.A.a.a.a.b.l	ENSGT01020000230389.b.a.a.a.b	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.e.b	ENSGT00940000154460.b.e.a.b	ENSGT00940000154542.b.b.k	ENSGT00940000154460.b.f	ENSGT00940000162707.m.b	ENSGT00940000155819.d
Capuchin	DUPLICATION
Capuchin	MODERN SPECIES	260	KDM7A (ENSCCAG00000036194) #8	ENSCCAG00000028375	SLC37A3 (ENSCCAG00000026819) #9	RAB19 (ENSCCAG00000029268) #10	MKRN1 (ENSCCAG00000037582) #11	DENND2A (ENSCCAG00000027573) #12	ENSCCAG00000008528 #13	NDUFB2 (ENSCCAG00000029688) #14	BRAF (ENSCCAG00000031128) #15	ENSCCAG00000027727	ENSCCAG00000035520 #17	TMEM178B (ENSCCAG00000032284) #18	AGK (ENSCCAG00000036439) #19	DENND11 (ENSCCAG00000024825) #20	WEE2 (ENSCCAG00000033355)	ENSCCAG00000037419 #22	PRSS37 (ENSCCAG00000030678) #25	OR9A4 (ENSCCAG00000037742)	CLEC5A (ENSCCAG00000023805) #27	ENSCCAG00000030808 #29
Capuchin	MODERN SPECIES	16	ACOT12 (ENSCCAG00000010251)	SSBP2 (ENSCCAG00000029743)	ATG10 (ENSCCAG00000021612)	ENSCCAG00000023908	RPS23 (ENSCCAG00000022444)	ENSCCAG00000032614	ENSCCAG00000032509	ENSCCAG00000037444	ENSCCAG00000035743	TMEM167A (ENSCCAG00000021704)	XRCC4 (ENSCCAG00000021185)	VCAN (ENSCCAG00000026158)	ENSCCAG00000029740	HAPLN1 (ENSCCAG00000023370)	EDIL3 (ENSCCAG00000010698)	ENSCCAG00000036566 #22	COX7C (ENSCCAG00000021409)	ENSCCAG00000034902	ENSCCAG00000012037	RASA1 (ENSCCAG00000027537)	CCNH (ENSCCAG00000031898)	ENSCCAG00000033383	TMEM161B (ENSCCAG00000025610)	MEF2C (ENSCCAG00000015818)	ENSCCAG00000030581	CETN3 (ENSCCAG00000021491)	MBLAC2 (ENSCCAG00000027096)	POLR3G (ENSCCAG00000032288)	LYSMD3 (ENSCCAG00000032472)	ADGRV1 (ENSCCAG00000034134)	ENSCCAG00000034004
Bolivian squirrel monkey	MODERN SPECIES	77	PARP12 (ENSSBOG00000035883) #7	KDM7A (ENSSBOG00000028446) #8	ENSSBOG00000034695	RAB19 (ENSSBOG00000027926) #10	ENSSBOG00000023992 ##11	DENND2A (ENSSBOG00000027489) #12	ADCK2 (ENSSBOG00000005779) #13	ENSSBOG00000031343 #14	BRAF (ENSSBOG00000028284) #15	ENSSBOG00000022573 #17	TMEM178B (ENSSBOG00000022271) #18	AGK (ENSSBOG00000019979) #19	ENSSBOG00000031574	DENND11 (ENSSBOG00000034522) #20	WEE2 (ENSSBOG00000027383)	ENSSBOG00000029766 #22	PRSS37 (ENSSBOG00000009697) #25	ENSSBOG00000008809	CLEC5A (ENSSBOG00000026187) #27	MGAM (ENSSBOG00000030990) #29	ENSSBOG00000023030	ENSSBOG00000033951	PRSS58 (ENSSBOG00000028857)	TRBV2 (ENSSBOG00000018075)	TRBV4-2 (ENSSBOG00000009509)	TRBV7-3 (ENSSBOG00000018082)	TRBV10-1 (ENSSBOG00000016754)	ENSSBOG00000018094	ENSSBOG00000014859	TRBV14 (ENSSBOG00000029655)	TRBV16 (ENSSBOG00000013613)
Mas night monkey	MODERN SPECIES	984	PARP12 (ENSANAG00000027023) #7	KDM7A (ENSANAG00000020956) #8	SLC37A3 (ENSANAG00000036220) #9	RAB19 (ENSANAG00000031005) #10	MKRN1 (ENSANAG00000036978) #11	DENND2A (ENSANAG00000034617) #12	ADCK2 (ENSANAG00000031411) #13	NDUFB2 (ENSANAG00000024539) #14	BRAF (ENSANAG00000030685) #15	ENSANAG00000036985 #17	ENSANAG00000035332 #18	AGK (ENSANAG00000034272) #19	ENSANAG00000025415	DENND11 (ENSANAG00000025741) #20	WEE2 (ENSANAG00000028062)	SSBP1 (ENSANAG00000021855) #22	PRSS37 (ENSANAG00000025837) #25	ENSANAG00000013359	CLEC5A (ENSANAG00000023741) #27	MGAM (ENSANAG00000026732) #29	MGAM2 (ENSANAG00000028334)	PRSS58 (ENSANAG00000025309)	TRBV2 (ENSANAG00000019846)	TRBV7-3 (ENSANAG00000025212)	TRBV10-1 (ENSANAG00000019734)	ENSANAG00000020863	TRBV7-9 (ENSANAG00000038442)	ENSANAG00000019721	TRBV16 (ENSANAG00000006214)	ENSANAG00000006270	TRBV24-1 (ENSANAG00000005245)
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00390000002796.q.b #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00390000002796.q.b #22
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00390000002796.q.b #22
Bolivian squirrel monkey	MODERN SPECIES	43	RPS23 (ENSSBOG00000025991)	ENSSBOG00000019560	ENSSBOG00000025673	ENSSBOG00000034795	ENSSBOG00000035740	ENSSBOG00000033727	TMEM167A (ENSSBOG00000031099)	XRCC4 (ENSSBOG00000033444)	VCAN (ENSSBOG00000030525)	HAPLN1 (ENSSBOG00000020151)	EDIL3 (ENSSBOG00000034196)	ENSSBOG00000022503	COX7C (ENSSBOG00000023483)	RASA1 (ENSSBOG00000024025)	CCNH (ENSSBOG00000019490)	ENSSBOG00000028202 #22	TMEM161B (ENSSBOG00000024706)	ENSSBOG00000019037	ENSSBOG00000031181	MEF2C (ENSSBOG00000018897)	CETN3 (ENSSBOG00000033177)	MBLAC2 (ENSSBOG00000022218)	ENSSBOG00000029447	LYSMD3 (ENSSBOG00000036033)	ADGRV1 (ENSSBOG00000031018)	ARRDC3 (ENSSBOG00000022253)	NR2F1 (ENSSBOG00000021749)	ENSSBOG00000034164	FAM172A (ENSSBOG00000019860)	KIAA0825 (ENSSBOG00000032086)	ENSSBOG00000019818
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00390000002796.r #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00390000002796.r #22
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00390000002796.r #22
Bolivian squirrel monkey	DUPLICATION
Bolivian squirrel monkey	DUPLICATION
Bolivian squirrel monkey	MODERN SPECIES	44	CALU (ENSSBOG00000025729)	OPN1SW (ENSSBOG00000022139)	CCDC136 (ENSSBOG00000028704)	FLNC (ENSSBOG00000025708)	ATP6V1F (ENSSBOG00000029644)	ATP6V1FNB (ENSSBOG00000021896)	KCP (ENSSBOG00000024349)	IRF5 (ENSSBOG00000024381)	TNPO3 (ENSSBOG00000029642)	TSPAN33 (ENSSBOG00000026557)	SMO (ENSSBOG00000034649)	AHCYL2 (ENSSBOG00000027053)	STRIP2 (ENSSBOG00000026530)	SMKR1 (ENSSBOG00000023260)	NRF1 (ENSSBOG00000022785)	ENSSBOG00000016230 #22	UBE2H (ENSSBOG00000003551)	ZC3HC1 (ENSSBOG00000032787)	KLHDC10 (ENSSBOG00000023838)	TMEM209 (ENSSBOG00000034815)	SSMEM1 (ENSSBOG00000018209)	CPA2 (ENSSBOG00000035827)	CPA4 (ENSSBOG00000031999)	CPA5 (ENSSBOG00000024319)	CPA1 (ENSSBOG00000021629)	CEP41 (ENSSBOG00000020133)	ENSSBOG00000027781	COPG2 (ENSSBOG00000031750)	TSGA13 (ENSSBOG00000026243)	KLF14 (ENSSBOG00000005892)	ENSSBOG00000031877
Bolivian squirrel monkey	MODERN SPECIES	42	APIP (ENSSBOG00000027533)	ENSSBOG00000007623	CD44 (ENSSBOG00000020740)	SLC1A2 (ENSSBOG00000031126)	PAMR1 (ENSSBOG00000034633)	TRIM44 (ENSSBOG00000019501)	LDLRAD3 (ENSSBOG00000024561)	COMMD9 (ENSSBOG00000023383)	PRR5L (ENSSBOG00000033062)	TRAF6 (ENSSBOG00000028498)	RAG1 (ENSSBOG00000016673)	RAG2 (ENSSBOG00000017623)	IFTAP (ENSSBOG00000025933)	ENSSBOG00000033020	LRRC4C (ENSSBOG00000018653)	ENSSBOG00000031892 #22	ENSSBOG00000029311	API5 (ENSSBOG00000021448)	TTC17 (ENSSBOG00000027019)	ENSSBOG00000026907	HSD17B12 (ENSSBOG00000023716)	ALKBH3 (ENSSBOG00000023947)	C11orf96 (ENSSBOG00000012454)	ENSSBOG00000024546	ENSSBOG00000020375	ACCS (ENSSBOG00000025833)	EXT2 (ENSSBOG00000012532)	ALX4 (ENSSBOG00000032868)	CD82 (ENSSBOG00000029660)	TSPAN18 (ENSSBOG00000032945)	TP53I11 (ENSSBOG00000028120)
Bolivian squirrel monkey	MODERN SPECIES	68	GASK1B (ENSSBOG00000033158)	TMEM144 (ENSSBOG00000026389)	ENSSBOG00000000044	RXFP1 (ENSSBOG00000024491)	C4orf46 (ENSSBOG00000022705)	ETFDH (ENSSBOG00000019431)	ENSSBOG00000022964	FNIP2 (ENSSBOG00000021113)	C4orf45 (ENSSBOG00000033692)	ENSSBOG00000024250	RAPGEF2 (ENSSBOG00000033382)	ENSSBOG00000030741	FSTL5 (ENSSBOG00000034377)	SLC45A1 (ENSSBOG00000024389)	RERE (ENSSBOG00000028927)	ENSSBOG00000031412 #22	ENSSBOG00000028561	ENSSBOG00000024285	CA6 (ENSSBOG00000026428)	SLC2A7 (ENSSBOG00000022852)	SLC2A5 (ENSSBOG00000029662)	GPR157 (ENSSBOG00000026507)	H6PD (ENSSBOG00000027475)	SPSB1 (ENSSBOG00000035578)	SLC25A33 (ENSSBOG00000026413)	TMEM201 (ENSSBOG00000035187)	PIK3CD (ENSSBOG00000024261)	CLSTN1 (ENSSBOG00000025761)	CTNNBIP1 (ENSSBOG00000032108)	ENSSBOG00000031973	NMNAT1 (ENSSBOG00000022076)
Marmoset	MODERN SPECIES	20	ENSCJAG00000083981	ENSCJAG00000013424	RAB19 (ENSCJAG00000013457) #10	MKRN1 (ENSCJAG00000013474) #11	DENND2A (ENSCJAG00000013487) #12	ENSCJAG00000074335	ADCK2 (ENSCJAG00000013509) #13	NDUFB2 (ENSCJAG00000013524) #14	BRAF (ENSCJAG00000013536) #15	ENSCJAG00000081978 #17	ENSCJAG00000086471	TMEM178B (ENSCJAG00000013588) #18	AGK (ENSCJAG00000013589) #19	DENND11 (ENSCJAG00000013621) #20	WEE2 (ENSCJAG00000013627)	SSBP1 (ENSCJAG00000013650) #22	PRSS37 (ENSCJAG00000013663) #25	ENSCJAG00000004026	ENSCJAG00000077616	CLEC5A (ENSCJAG00000087307) #27	TAS2R38 (ENSCJAG00000013686) #28	MGAM (ENSCJAG00000013692) #29	MGAM2 (ENSCJAG00000036807)	PRSS58 (ENSCJAG00000013813)	ENSCJAG00000062999	ENSCJAG00000013826	TRBV2 (ENSCJAG00000076376)	TRBV3-1 (ENSCJAG00000013834)	ENSCJAG00000062848	ENSCJAG00000081723	ENSCJAG00000060470
Mas night monkey	MODERN SPECIES	1054	ANKRD50 (ENSANAG00000035078)	FAT4 (ENSANAG00000032727)	INTU (ENSANAG00000030077)	SLC25A31 (ENSANAG00000029731)	HSPA4L (ENSANAG00000029426)	PLK4 (ENSANAG00000033097)	MFSD8 (ENSANAG00000036028)	ENSANAG00000002759	ABHD18 (ENSANAG00000024144)	LARP1B (ENSANAG00000034618)	PGRMC2 (ENSANAG00000036565)	ENSANAG00000035472	ENSANAG00000020721	ENSANAG00000029206	JADE1 (ENSANAG00000033708)	ENSANAG00000018791 #22	SCLT1 (ENSANAG00000028256)	C4orf33 (ENSANAG00000022551)
Tarsier	MODERN SPECIES	2580											MRPS33 (ENSTSYG00000030181) #17	TMEM178B (ENSTSYG00000030068) #18	AGK (ENSTSYG00000014497) #19	DENND11 (ENSTSYG00000014511) #20	WEE2 (ENSTSYG00000002451)	SSBP1 (ENSTSYG00000035240) #22
Laurasiatheria	ANCESTRAL SPECIES	21	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a
Eulipotyphla	ANCESTRAL SPECIES	190																ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25
Hedgehog	MODERN SPECIES	947																SSBP1 (ENSEEUG00000010837) #22	TAS2R3 (ENSEEUG00000010873) #23	ENSEEUG00000010884 #24
Common shrew	MODERN SPECIES	552																SSBP1 (ENSSARG00000011495) #22
Laurasiatheria_a	ANCESTRAL SPECIES	14	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a
Artiodactyla	ANCESTRAL SPECIES	11	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00940000164718 #26	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a
Suina	ANCESTRAL SPECIES	19	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000164097
Pig	MODERN SPECIES	9	KDM7A (ENSSSCG00000016501) #8	ENSSSCG00000039349	SLC37A3 (ENSSSCG00000032266) #9	RAB19 (ENSSSCG00000038693) #10	MKRN1 (ENSSSCG00000016498) ##11	DENND2A (ENSSSCG00000016497) #12	ADCK2 (ENSSSCG00000016496) #13	NDUFB2 (ENSSSCG00000032390) #14	BRAF (ENSSSCG00000016494) #15	ENSSSCG00000041343	MRPS33 (ENSSSCG00000013470) #17	TMEM178B (ENSSSCG00000016493) #18	AGK (ENSSSCG00000016492) #19	DENND11 (ENSSSCG00000016491) #20	WEE2 (ENSSSCG00000016489)	SSBP1 (ENSSSCG00000016488) #22	TAS2R3 (ENSSSCG00000028394) #23	TAS2R4 (ENSSSCG00000021525) #24	PRSS37 (ENSSSCG00000029612) #25	ENSSSCG00000027039	OR9A1P (ENSSSCG00000061025) #26	ENSSSCG00000036925	CLEC5A (ENSSSCG00000021933) #27	MGAM (ENSSSCG00000034639) #29	MGAM2 (ENSSSCG00000016487)	ENSSSCG00000016486	ENSSSCG00000037885	PRSS58 (ENSSSCG00000016485)	ENSSSCG00000016484	ENSSSCG00000036013	TRBV3-1 (ENSSSCG00000047566)
Chacoan peccary	MODERN SPECIES	115	SLC37A3 (ENSCWAG00000016357) #9	RAB19 (ENSCWAG00000016413) #10	MKRN1 (ENSCWAG00000016439) ##11	DENND2A (ENSCWAG00000016505) #12	ADCK2 (ENSCWAG00000016718) #13	NDUFB2 (ENSCWAG00000016781) #14	BRAF (ENSCWAG00000016905) #15	ENSCWAG00000017237	ENSCWAG00000017265	ENSCWAG00000017296	ENSCWAG00000017305 #17	TMEM178B (ENSCWAG00000017339) #18	AGK (ENSCWAG00000017395) #19	DENND11 (ENSCWAG00000017576) #20	WEE2 (ENSCWAG00000017685)	SSBP1 (ENSCWAG00000017760) #22	TAS2R3 (ENSCWAG00000017788) #23	TAS2R4 (ENSCWAG00000017801) #24	PRSS37 (ENSCWAG00000017816) #25	OR9A1P (ENSCWAG00000017858) #26	CLEC5A (ENSCWAG00000017884) #27	MGAM (ENSCWAG00000018138) #29	ENSCWAG00000018364	ENSCWAG00000018429	ENSCWAG00000018564	PRSS58 (ENSCWAG00000018631)	ENSCWAG00000018658	ENSCWAG00000018704	ENSCWAG00000018734	ENSCWAG00000018754	ENSCWAG00000018776
Artiodactyla_a	ANCESTRAL SPECIES	11	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00940000164718 #26	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a
Camelidae	ANCESTRAL SPECIES	2	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT00940000164097	ENSGT00940000154270.a.b.q.b	ENSGT00940000154542.b.a	ENSGT00940000154460.b
Arabian camel	MODERN SPECIES	33	TBXAS1 (ENSCDRG00005003325)	PARP12 (ENSCDRG00005003422) #7	KDM7A (ENSCDRG00005003493) #8	SLC37A3 (ENSCDRG00005003585) #9	RAB19 (ENSCDRG00005003711) #10	MKRN1 (ENSCDRG00005003742) ##11	DENND2A (ENSCDRG00005003834) #12	ADCK2 (ENSCDRG00005004011) #13	NDUFB2 (ENSCDRG00005004074) #14	BRAF (ENSCDRG00005004131) #15	MRPS33 (ENSCDRG00005004320) #17	TMEM178B (ENSCDRG00005004347) #18	AGK (ENSCDRG00005004378) #19	DENND11 (ENSCDRG00005004485) #20	WEE2 (ENSCDRG00005004501)	SSBP1 (ENSCDRG00005004546) #22	PRSS37 (ENSCDRG00005004595) #25	ENSCDRG00005005393 #27	TAS2R38 (ENSCDRG00005005420) #28	MGAM (ENSCDRG00005005484) #29	ENSCDRG00005005559	ENSCDRG00005005603	ENSCDRG00005005685	PRSS58 (ENSCDRG00005005726)	ENSCDRG00005005742	TRBV3-1 (ENSCDRG00005005751)	ENSCDRG00005005756	ENSCDRG00005005773	ENSCDRG00005005806	ENSCDRG00005005812	ENSCDRG00005005821
Alpaca	MODERN SPECIES	2110														AGK (ENSVPAG00000003677) #19	WEE2 (ENSVPAG00000003678)	SSBP1 (ENSVPAG00000003679) #22	TAS2R3 (ENSVPAG00000003682) #23	TAS2R4 (ENSVPAG00000003683) #24	PRSS37 (ENSVPAG00000003685) #25	CLEC5A (ENSVPAG00000003686) #27	ENSVPAG00000003687 #29	TAS2R38 (ENSVPAG00000003688) #28	ENSVPAG00000003690	ENSVPAG00000003691	ENSVPAG00000003692	PRSS58 (ENSVPAG00000003693)	ENSVPAG00000003694	ENSVPAG00000003695
Artiodactyla_b	ANCESTRAL SPECIES	11	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00940000164718 #26	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a
Pecora	ANCESTRAL SPECIES	11	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044.jb #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00940000164718 #26	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a
Percora_a	ANCESTRAL SPECIES	11	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044.jb #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00940000164718.b #26	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a
Siberian musk deer	MODERN SPECIES	84	ENSMMSG00000001940	PARP12 (ENSMMSG00000001913) #7	KDM7A (ENSMMSG00000001870) #8	SLC37A3 (ENSMMSG00000001841) #9	RAB19 (ENSMMSG00000001820) #10	ENSMMSG00000001799 ##11	DENND2A (ENSMMSG00000001773) #12	ADCK2 (ENSMMSG00000001742) #13	ENSMMSG00000001727 #14	BRAF (ENSMMSG00000001692) #15	MRPS33 (ENSMMSG00000001665) #17	TMEM178B (ENSMMSG00000001648) #18	AGK (ENSMMSG00000001568) #19	DENND11 (ENSMMSG00000001523) #20	WEE2 (ENSMMSG00000001502)	SSBP1 (ENSMMSG00000001484) #22	TAS2R3 (ENSMMSG00000001474) #23	TAS2R4 (ENSMMSG00000001467) #24	PRSS37 (ENSMMSG00000001438) #25	OR9A4 (ENSMMSG00000001426)	OR9A1P (ENSMMSG00000001418) #26	CLEC5A (ENSMMSG00000001372) #27	TAS2R38 (ENSMMSG00000001352) #28	MGAM (ENSMMSG00000001266) #29	ENSMMSG00000001157	ENSMMSG00000001130	PRSS58 (ENSMMSG00000001105)	ENSMMSG00000001086	ENSMMSG00000001007	ENSMMSG00000000986	ENSMMSG00000000967
Bovidae	ANCESTRAL SPECIES	12	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044.jb #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00940000164718.b #26	ENSGT00940000164718.a #26	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b
Bovinae	ANCESTRAL SPECIES	8	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044.jb #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00940000164718.b.a.b #26	ENSGT00940000164718.b.a.a #26	ENSGT00940000164718.a #26	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b
American bison	MODERN SPECIES	3266	TBXAS1 (ENSBBBG00000015965)	PARP12 (ENSBBBG00000003932) #7	KDM7A (ENSBBBG00000007563) #8	SLC37A3 (ENSBBBG00000015735) #9	RAB19 (ENSBBBG00000003919) #10	ENSBBBG00000015693 ##11	DENND2A (ENSBBBG00000015682) #12	ADCK2 (ENSBBBG00000003435) #13	ENSBBBG00000003447 #14	BRAF (ENSBBBG00000015611) #15	MRPS33 (ENSBBBG00000015506) #17	TMEM178B (ENSBBBG00000015500) #18	AGK (ENSBBBG00000015486) #19	DENND11 (ENSBBBG00000015364) #20	WEE2 (ENSBBBG00000015353)	SSBP1 (ENSBBBG00000003813) #22	TAS2R3 (ENSBBBG00000015325) #23	TAS2R4 (ENSBBBG00000015322) #24	PRSS37 (ENSBBBG00000001257) #25	OR9A4 (ENSBBBG00000001275)	ENSBBBG00000001280 #26	ENSBBBG00000001284 #26	ENSBBBG00000001290	CLEC5A (ENSBBBG00000001296) #27	TAS2R38 (ENSBBBG00000001337) #28	MGAM (ENSBBBG00000001362) #29	ENSBBBG00000015238	ENSBBBG00000003774	ENSBBBG00000015178	PRSS58 (ENSBBBG00000003537)	ENSBBBG00000003758
Bos	ANCESTRAL SPECIES	8	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044.jb #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00940000164718.b.a.a #26	ENSGT00940000164718.a #26	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a
Bos_a	ANCESTRAL SPECIES	12	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044.jb #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000163413	ENSGT00940000164718.b.a.a #26	ENSGT00910000144330 #27
Domestic yak	MODERN SPECIES	23	SLC37A3 (ENSBGRG00000000779) #9	RAB19 (ENSBGRG00000000744) #10	ENSBGRG00000000642 ##11	ENSBGRG00000000626	DENND2A (ENSBGRG00000000595) #12	ADCK2 (ENSBGRG00000000551) #13	ENSBGRG00000000525 #14	BRAF (ENSBGRG00000000301) #15	MRPS33 (ENSBGRG00000000246) #17	ENSBGRG00000000238 #17	ENSBGRG00000017649 #18	ENSBGRG00000017373	AGK (ENSBGRG00000016854) #19	DENND11 (ENSBGRG00000016745) #20	WEE2 (ENSBGRG00000016334)	SSBP1 (ENSBGRG00000016274) #22	TAS2R3 (ENSBGRG00000016256) #23	TAS2R4 (ENSBGRG00000016236) #24	PRSS37 (ENSBGRG00000016095) #25	ENSBGRG00000016067	ENSBGRG00000016026	ENSBGRG00000016009	ENSBGRG00000015987	ENSBGRG00000015928 #26	VIPR2 (ENSBGRG00000015840)	DYNC2I1 (ENSBGRG00000015386)	ESYT2 (ENSBGRG00000014549)	NCAPG2 (ENSBGRG00000014257)	ENSBGRG00000014087	DNAJB6 (ENSBGRG00000013883)	UBE3C (ENSBGRG00000013115)
Wild yak	MODERN SPECIES	1240							ENSBMUG00000014555 #14	BRAF (ENSBMUG00000014190) #15	MRPS33 (ENSBMUG00000013693) #17	ENSBMUG00000013648 #18	ENSBMUG00000013637	ENSBMUG00000013632 #18	AGK (ENSBMUG00000013602) #19	DENND11 (ENSBMUG00000013497) #20	WEE2 (ENSBMUG00000013476)	SSBP1 (ENSBMUG00000013407) #22	TAS2R3 (ENSBMUG00000013363) #23	PRSS37 (ENSBMUG00000013330) #25	OR9A4 (ENSBMUG00000013310)	OR9A1P (ENSBMUG00000013278) #26	CLEC5A (ENSBMUG00000013241) #27
Bos_b	ANCESTRAL SPECIES	7	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044.jb #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718.b.a.b #26	ENSGT00940000164718.b.a.a #26	ENSGT00940000163413	ENSGT00940000164718.b.b #26	ENSGT00940000164718.a #26	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a
Cow	MODERN SPECIES	23	PARP12 (ENSBTAG00000016546) #7	KDM7A (ENSBTAG00000003495) #8	SLC37A3 (ENSBTAG00000012239) #9	RAB19 (ENSBTAG00000012261) #10	MKRN1 (ENSBTAG00000008306) ##11	DENND2A (ENSBTAG00000004799) #12	ADCK2 (ENSBTAG00000020484) #13	NDUFB2 (ENSBTAG00000021759) #14	BRAF (ENSBTAG00000021761) #15	MRPS33 (ENSBTAG00000005285) #17	ENSBTAG00000051724 #18	ENSBTAG00000053379 #18	AGK (ENSBTAG00000019265) #19	DENND11 (ENSBTAG00000016879) #20	WEE2 (ENSBTAG00000004658)	SSBP1 (ENSBTAG00000010931) #22	TAS2R3 (ENSBTAG00000016880) #23	TAS2R4 (ENSBTAG00000018440) #24	PRSS37 (ENSBTAG00000018442) #25	ENSBTAG00000027341	OR9A4 (ENSBTAG00000054915)	OR9A17 (ENSBTAG00000049043) #26	OR9A18 (ENSBTAG00000049592) #26	OR9A7 (ENSBTAG00000048496) #26	CLEC5A (ENSBTAG00000020453) #27	TAS2R38 (ENSBTAG00000024065) #28	MGAM (ENSBTAG00000046152) #29	MOXD2 (ENSBTAG00000003621)	PRSS58 (ENSBTAG00000003628)	ENSBTAG00000031236	PRSS1 (ENSBTAG00000052726)
Hybrid Bos Indicus	MODERN SPECIES	23	ENSBIXG00005030894	KDM7A (ENSBIXG00005030888) #8	SLC37A3 (ENSBIXG00005030870) #9	RAB19 (ENSBIXG00005030856) #10	MKRN1 (ENSBIXG00005030841) ##11	DENND2A (ENSBIXG00005030818) #12	ADCK2 (ENSBIXG00005030802) #13	ENSBIXG00005030783 #14	BRAF (ENSBIXG00005030730) #15	MRPS33 (ENSBIXG00005030703) #17	TMEM178B (ENSBIXG00005030684) #18	ENSBIXG00005030668	AGK (ENSBIXG00005030624) #19	DENND11 (ENSBIXG00005030578) #20	WEE2 (ENSBIXG00005030568)	SSBP1 (ENSBIXG00005030556) #22	TAS2R3 (ENSBIXG00005030551) #23	TAS2R4 (ENSBIXG00005030549) #24	PRSS37 (ENSBIXG00005030543) #25	ENSBIXG00005030540	ENSBIXG00005030529 #26	ENSBIXG00005030524 #26	OR9A4 (ENSBIXG00005030521)	CLEC5A (ENSBIXG00005030512) #27	TAS2R38 (ENSBIXG00005030506) #28	ENSBIXG00005030502	MGAM (ENSBIXG00005008859) #29	ENSBIXG00005009390	PRSS58 (ENSBIXG00005009415)	ENSBIXG00005009425	ENSBIXG00005009443
Caprinae	ANCESTRAL SPECIES	10	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044.jb #14	ENSGT00940000156154 #15	ENSGT00390000011401.mb #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718.b #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.b.x
Rambouillet Sheep	MODERN SPECIES	20	HIPK2 (ENSOARG00020004569)	TBXAS1 (ENSOARG00020004929)	KDM7A (ENSOARG00020005079) #8	SLC37A3 (ENSOARG00020005137) #9	RAB19 (ENSOARG00020005219) #10	ENSOARG00020005232 ##11	DENND2A (ENSOARG00020005286) #12	ADCK2 (ENSOARG00020005352) #13	NDUFB2 (ENSOARG00020005380) #14	BRAF (ENSOARG00020005423) #15	ENSOARG00020005487 #17	TMEM178B (ENSOARG00020005515) #18	AGK (ENSOARG00020005551) #19	DENND11 (ENSOARG00020005703) #20	WEE2 (ENSOARG00020005754)	SSBP1 (ENSOARG00020005814) #22	TAS2R3 (ENSOARG00020005838) #23	TAS2R4 (ENSOARG00020005852) #24	PRSS37 (ENSOARG00020005886) #25	ENSOARG00020005924	ENSOARG00020005951	OR9A4 (ENSOARG00020005962)	OR9A1P (ENSOARG00020000207) #26	ENSOARG00020000219	CLEC5A (ENSOARG00020000250) #27	TAS2R38 (ENSOARG00020000290) #28	MGAM (ENSOARG00020000329) #29	MGAM2 (ENSOARG00020000546)	ENSOARG00020000674	PRSS58 (ENSOARG00020000699)	ENSOARG00020000720
Goat	DUPLICATION
Goat	DUPLICATION
Goat	MODERN SPECIES	23	KDM7A (ENSCHIG00000013546) #8	SLC37A3 (ENSCHIG00000009119) #9	RAB19 (ENSCHIG00000006465) #10	ENSCHIG00000024804 ##11	DENND2A (ENSCHIG00000023014) #12	ADCK2 (ENSCHIG00000025299) #13	NDUFB2 (ENSCHIG00000016937) #14	BRAF (ENSCHIG00000018376) #15	ENSCHIG00000011022	ENSCHIG00000023631 #17	ENSCHIG00000012235 #18	ENSCHIG00000024421 #18	AGK (ENSCHIG00000023107) #19	DENND11 (ENSCHIG00000015543) #20	ENSCHIG00000018792	ENSCHIG00000014181 #22	TAS2R3 (ENSCHIG00000010773) #23	TAS2R4 (ENSCHIG00000011112) #24	TAS2R5 (ENSCHIG00000013989) ##28	PRSS37 (ENSCHIG00000000473) #25	OR9A4 (ENSCHIG00000021147)	ENSCHIG00000007632 #26	ENSCHIG00000008736 #26	CLEC5A (ENSCHIG00000019120) #27	TAS2R38 (ENSCHIG00000010606) #28	MGAM (ENSCHIG00000015947) #29	MGAM2 (ENSCHIG00000015889)	ENSCHIG00000025988	ENSCHIG00000018979	PRSS58 (ENSCHIG00000010583)	ENSCHIG00000020117
Goat	MODERN SPECIES	23									ENSCHIG00000022094	ENSCHIG00000026193	ENSCHIG00000008273	ENSCHIG00000016202	VSTM2A (ENSCHIG00000006883)	ENSCHIG00000012143	ENSCHIG00000021784	ENSCHIG00000013466 #22	ENSCHIG00000023516	ENSCHIG00000026383	ENSCHIG00000013791	COBL (ENSCHIG00000022759)	GRB10 (ENSCHIG00000022163)	DDC (ENSCHIG00000013689)	FIGNL1 (ENSCHIG00000005867)	IKZF1 (ENSCHIG00000018797)	SPATA48 (ENSCHIG00000015201)	ZPBP (ENSCHIG00000008321)	VWC2 (ENSCHIG00000020940)	ENSCHIG00000008014	ABCA13 (ENSCHIG00000020126)	UPP1 (ENSCHIG00000014663)	C7orf57 (ENSCHIG00000013490)
Goat	MODERN SPECIES	10	ENSCHIG00000022085	CACNB1 (ENSCHIG00000021855)	ARL5C (ENSCHIG00000008208)	PLXDC1 (ENSCHIG00000024239)	FBXO47 (ENSCHIG00000013068)	LASP1 (ENSCHIG00000019675)	ENSCHIG00000016076	C17orf98 (ENSCHIG00000010304)	CWC25 (ENSCHIG00000015063)	PIP4K2B (ENSCHIG00000022865)	PSMB3 (ENSCHIG00000012081)	PCGF2 (ENSCHIG00000018902)	ENSCHIG00000002051	MLLT6 (ENSCHIG00000019829)	EPOP (ENSCHIG00000008501)	ENSCHIG00000019374 #22	SRCIN1 (ENSCHIG00000022297)	ARHGAP23 (ENSCHIG00000023996)	SOCS7 (ENSCHIG00000012449)	GPR179 (ENSCHIG00000026098)	MRPL45 (ENSCHIG00000014110)	NPEPPS (ENSCHIG00000022782)	KPNB1 (ENSCHIG00000014896)	TBKBP1 (ENSCHIG00000016860)	TBX21 (ENSCHIG00000021993)	OSBPL7 (ENSCHIG00000023060)	MRPL10 (ENSCHIG00000027033)	LRRC46 (ENSCHIG00000015497)	SCRN2 (ENSCHIG00000026802)	SP6 (ENSCHIG00000009897)	SP2 (ENSCHIG00000018648)
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	9	ENSCHYG00000019273	SLC37A3 (ENSCHYG00000019327) #9	RAB19 (ENSCHYG00000019781) #10	ENSCHYG00000019857 ##11	DENND2A (ENSCHYG00000020046) #12	ADCK2 (ENSCHYG00000020204) #13	NDUFB2 (ENSCHYG00000020392) #14	BRAF (ENSCHYG00000020466) #15	ENSCHYG00000020681 #17	TMEM178B (ENSCHYG00000020754) #18	ENSCHYG00000020854	AGK (ENSCHYG00000021039) #19	DENND11 (ENSCHYG00000021628) #20	ENSCHYG00000021735	WEE2 (ENSCHYG00000021766)	ENSCHYG00000021894 #22	TAS2R3 (ENSCHYG00000021939) #23	TAS2R4 (ENSCHYG00000021959) #24	PRSS37 (ENSCHYG00000021973) #25	ENSCHYG00000022000	OR9A4 (ENSCHYG00000022018)	OR9A1P (ENSCHYG00000022032) #26	ENSCHYG00000022053	CLEC5A (ENSCHYG00000022087) #27	TAS2R38 (ENSCHYG00000022288) #28	MGAM2 (ENSCHYG00000022362)	ENSCHYG00000022992	ENSCHYG00000023056	PRSS58 (ENSCHYG00000023073)	ENSCHYG00000023095	ENSCHYG00000023122
Yarkand deer	MODERN SPECIES	18	CCN2 (ENSCHYG00000021889)	ENPP1 (ENSCHYG00000021685)	ENSCHYG00000021655	ENPP3 (ENSCHYG00000021429)	MED23 (ENSCHYG00000020859)	ARG1 (ENSCHYG00000020752)	ENSCHYG00000020691	AKAP7 (ENSCHYG00000020610)	EPB41L2 (ENSCHYG00000018851)	SMLR1 (ENSCHYG00000018712)	TMEM200A (ENSCHYG00000018697)	SAMD3 (ENSCHYG00000018523)	L3MBTL3 (ENSCHYG00000018215)	TMEM244 (ENSCHYG00000018176)	ARHGAP18 (ENSCHYG00000017830)	ENSCHYG00000017769 #22	LAMA2 (ENSCHYG00000016217)	PTPRK (ENSCHYG00000015602)	THEMIS (ENSCHYG00000015464)	ENSCHYG00000015412	CYB5R4 (ENSCHYG00000014714)	MRAP2 (ENSCHYG00000014617)	CEP162 (ENSCHYG00000014176)	TBX18 (ENSCHYG00000013985)	ENSCHYG00000013935	ENSCHYG00000022979
Cetacea	ANCESTRAL SPECIES	13	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044.hb #14	ENSGT00940000156154 #15	ENSGT00390000011401.hb #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000154460.a	ENSGT00940000154270.b	ENSGT00940000154542.b.a	ENSGT00940000154270.a.b.r	ENSGT00940000154460.b
Odontoceti	ANCESTRAL SPECIES	12	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044.hb #14	ENSGT00940000156154 #15	ENSGT00390000011401.hb #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000154460.a	ENSGT00940000154270.b	ENSGT00940000154542.b.a	ENSGT00940000154270.a.b.r	ENSGT00940000154460.b	ENSGT00940000154542.b.b
Odontoceti_a	ANCESTRAL SPECIES	13	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044.hb #14	ENSGT00940000156154 #15	ENSGT00390000011401.hb #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000161540 #29	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000154460.a	ENSGT00940000154270.b	ENSGT00940000154542.b.a	ENSGT00940000154270.a.b.r	ENSGT00940000154460.b	ENSGT00940000154542.b.b	ENSGT00940000162707
Odontoceti_b	ANCESTRAL SPECIES	13	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044.hb.b #14	ENSGT00940000156154 #15	ENSGT00390000011401.hb #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000161540 #29	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000154460.a	ENSGT00940000154270.b	ENSGT00940000154542.b.a	ENSGT00940000154270.a.b.r	ENSGT00940000154460.b	ENSGT00940000154542.b.b	ENSGT00940000162707
Monodontidae	ANCESTRAL SPECIES	12	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044.hb.b #14	ENSGT00940000156154 #15	ENSGT00390000011401.hb #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000161540 #29	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000154460.a	ENSGT00940000154270.b	ENSGT00940000154542.b.a	ENSGT00940000154270.a.b.r	ENSGT00940000154460.b	ENSGT00940000154542.b.b	ENSGT00940000162707	ENSGT00940000163545.a
Narwhal	MODERN SPECIES	306	TBXAS1 (ENSMMNG00015009967)	PARP12 (ENSMMNG00015009981) #7	KDM7A (ENSMMNG00015009995) #8	ENSMMNG00015010018	RAB19 (ENSMMNG00015010050) #10	MKRN1 (ENSMMNG00015010057) #11	DENND2A (ENSMMNG00015010068) #12	ADCK2 (ENSMMNG00015010091) #13	ENSMMNG00015010116 #14	BRAF (ENSMMNG00015010154) #15	ENSMMNG00015010197 #17	TMEM178B (ENSMMNG00015010207) #18	AGK (ENSMMNG00015010245) #19	DENND11 (ENSMMNG00015010294) #20	WEE2 (ENSMMNG00015010311)	SSBP1 (ENSMMNG00015010343) #22	TAS2R3 (ENSMMNG00015010363) #23	TAS2R4 (ENSMMNG00015010372) #24	PRSS37 (ENSMMNG00015010392) #25	MGAM (ENSMMNG00015010883) #29	ENSMMNG00015011527	ENSMMNG00015011580	ENSMMNG00015011598	ENSMMNG00015011609	ENSMMNG00015011624	ENSMMNG00015011633	ENSMMNG00015011645	ENSMMNG00015011657	ENSMMNG00015011663	ENSMMNG00015011678	ENSMMNG00015011688
Beluga whale	MODERN SPECIES	72	KDM7A (ENSDLEG00000021119) #8	ENSDLEG00000021116	ENSDLEG00000021115	RAB19 (ENSDLEG00000021111) #10	MKRN1 (ENSDLEG00000021109) #11	DENND2A (ENSDLEG00000021099) #12	ADCK2 (ENSDLEG00000021096) #13	ENSDLEG00000021093 #14	BRAF (ENSDLEG00000021077) #15	MRPS33 (ENSDLEG00000021075) #17	ENSDLEG00000021072 #18	ENSDLEG00000021067 #18	AGK (ENSDLEG00000021057) #19	KIAA1147 (ENSDLEG00000021048) #20	WEE2 (ENSDLEG00000021040)	SSBP1 (ENSDLEG00000021032) #22	TAS2R4 (ENSDLEG00000021030) #24	PRSS37 (ENSDLEG00000021026) #25	MGAM (ENSDLEG00000018505) #29	ENSDLEG00000018001	ENSDLEG00000017986	ENSDLEG00000017974	ENSDLEG00000017963	ENSDLEG00000017950	ENSDLEG00000017940	ENSDLEG00000017928	ENSDLEG00000017916	ENSDLEG00000017911	ENSDLEG00000017897	ENSDLEG00000017885	ENSDLEG00000017865
Vaquita	MODERN SPECIES	20	TBXAS1 (ENSPSNG00000017057)	PARP12 (ENSPSNG00000016948) #7	KDM7A (ENSPSNG00000016893) #8	ENSPSNG00000016803	RAB19 (ENSPSNG00000016717) #10	MKRN1 (ENSPSNG00000016640) #11	DENND2A (ENSPSNG00000016464) #12	ADCK2 (ENSPSNG00000016397) #13	ENSPSNG00000016266 #14	BRAF (ENSPSNG00000016141) #15	ENSPSNG00000016049 #17	TMEM178B (ENSPSNG00000015985) #18	AGK (ENSPSNG00000015653) #19	DENND11 (ENSPSNG00000015409) #20	WEE2 (ENSPSNG00000015224)	SSBP1 (ENSPSNG00000015143) #22	TAS2R4 (ENSPSNG00000014812) #24	TAS2R5 (ENSPSNG00000014749) ##28	PRSS37 (ENSPSNG00000014654) #25	MGAM (ENSPSNG00000013851) #29	ENSPSNG00000013730	ENSPSNG00000013190	ENSPSNG00000013078	ENSPSNG00000013034	ENSPSNG00000012987	ENSPSNG00000012936	ENSPSNG00000012881	ENSPSNG00000012846	ENSPSNG00000012814	ENSPSNG00000012769	ENSPSNG00000012684
Dolphin	MODERN SPECIES	2768													ENSTTRG00000009948	AGK (ENSTTRG00000009958) #19	WEE2 (ENSTTRG00000009975)	SSBP1 (ENSTTRG00000009987) #22	PRSS37 (ENSTTRG00000010006) #25
Sperm whale	MODERN SPECIES	16	ENSPCTG00005002106 #7	KDM7A (ENSPCTG00005002076) #8	SLC37A3 (ENSPCTG00005001973)	RAB19 (ENSPCTG00005001933) #10	MKRN1 (ENSPCTG00005001919) ##11	ADCK2 (ENSPCTG00005001907) #13	DENND2A (ENSPCTG00005001895) #12	ENSPCTG00005001882 #14	BRAF (ENSPCTG00005001762) #15	MRPS33 (ENSPCTG00005001712) #17	TMEM178B (ENSPCTG00005001699) #18	AGK (ENSPCTG00005001621) #19	KIAA1147 (ENSPCTG00005001569) #20	WEE2 (ENSPCTG00005001548)	ENSPCTG00005001533	SSBP1 (ENSPCTG00005001511) #22	TAS2R4 (ENSPCTG00005001494) #24	PRSS37 (ENSPCTG00005001480) #25	TAS2R38 (ENSPCTG00005001461) #28	MGAM (ENSPCTG00005001373) #29	ENSPCTG00005001338	ENSPCTG00005001323	ENSPCTG00005001310	ENSPCTG00005001300	ENSPCTG00005001289	ENSPCTG00005001274	ENSPCTG00005001260	ENSPCTG00005001242	ENSPCTG00005001227	ENSPCTG00005001217	ENSPCTG00005001204
Blue whale	DUPLICATION
Blue whale	MODERN SPECIES	11	PIGB (ENSBMSG00010003389)	CCPG1 (ENSBMSG00010003354)	PIERCE2 (ENSBMSG00010003343)	DNAAF4 (ENSBMSG00010003330)	PYGO1 (ENSBMSG00010003306)	ENSBMSG00010003291	PRTG (ENSBMSG00010003236)	ENSBMSG00010003217	NEDD4 (ENSBMSG00010003007)	RFX7 (ENSBMSG00010002951)	ENSBMSG00010002935	TEX9 (ENSBMSG00010002805)	MNS1 (ENSBMSG00010002770)	ENSBMSG00010002765	ENSBMSG00010002756	ENSBMSG00010002738 #22	TCF12 (ENSBMSG00010002642)	CGNL1 (ENSBMSG00010002567)	MYZAP (ENSBMSG00010002466)	ENSBMSG00010002414	ALDH1A2 (ENSBMSG00010002264)	AQP9 (ENSBMSG00010002216)	LIPC (ENSBMSG00010002097)	ADAM10 (ENSBMSG00010002053)	MINDY2 (ENSBMSG00010002021)	SLTM (ENSBMSG00010001996)	RNF111 (ENSBMSG00010001868)	CCNB2 (ENSBMSG00010001737)	MYO1E (ENSBMSG00010001489)	FAM81A (ENSBMSG00010001446)	ENSBMSG00010001413
Blue whale	MODERN SPECIES	20	PARP12 (ENSBMSG00010015492) #7	KDM7A (ENSBMSG00010015443) #8	SLC37A3 (ENSBMSG00010015373) #9	RAB19 (ENSBMSG00010015336) #10	MKRN1 (ENSBMSG00010015275) ##11	ENSBMSG00010015236 #12	ENSBMSG00010015079 #12	ADCK2 (ENSBMSG00010015030) #13	ENSBMSG00010014979 #14	BRAF (ENSBMSG00010014913) #15	ENSBMSG00010014857 #17	TMEM178B (ENSBMSG00010014839) #18	AGK (ENSBMSG00010014634) #19	DENND11 (ENSBMSG00010014559) #20	WEE2 (ENSBMSG00010014473)	ENSBMSG00010014422 #22	PRSS37 (ENSBMSG00010014322) #25	MGAM (ENSBMSG00010014030) #29	ENSBMSG00010013939	PRSS58 (ENSBMSG00010013894)	ENSBMSG00010013865	ENSBMSG00010013824	ENSBMSG00010017998	ENSBMSG00010017982	ENSBMSG00010017955	ENSBMSG00010017937	ENSBMSG00010017918	ENSBMSG00010017909	ENSBMSG00010017899	ENSBMSG00010017881	ENSBMSG00010017795
Laurasiatheria_b	ANCESTRAL SPECIES	14	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a
Carnivora	ANCESTRAL SPECIES	15	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413.d	ENSGT00940000163413.c	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b
Felidae	ANCESTRAL SPECIES	13	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000017491.t.u.k	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413.c	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000164097
Panthera	ANCESTRAL SPECIES	1	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000017491.t.u.k	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413.c	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000164097
Tiger	MODERN SPECIES	338												ENSPTIG00000006995 #18	AGK (ENSPTIG00000007059) #19	DENND11 (ENSPTIG00000007425) #20	WEE2 (ENSPTIG00000007441)	SSBP1 (ENSPTIG00000007543) #22	TAS2R3 (ENSPTIG00000008623) #23	PRSS37 (ENSPTIG00000007671) #25	OR9A1P (ENSPTIG00000008631) #26	OR9A4 (ENSPTIG00000008641)	CLEC5A (ENSPTIG00000007743) #27	TAS2R38 (ENSPTIG00000008646) #28	MGAM (ENSPTIG00000007791) #29	MGAM2 (ENSPTIG00000007875)	ENSPTIG00000007941	ENSPTIG00000007959	PRSS58 (ENSPTIG00000007966)	ENSPTIG00000007980	ENSPTIG00000007990	ENSPTIG00000007999	ENSPTIG00000008004
Panthera_a	ANCESTRAL SPECIES		ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000017491.t.u.k	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT00940000161483 #25	ENSGT00940000163413.d	ENSGT00940000164718 #26	ENSGT00940000163413.c	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l
lion	MODERN SPECIES	2	PARP12 (ENSPLOG00000006216) #7	KDM7A (ENSPLOG00000006272) #8	SLC37A3 (ENSPLOG00000006322) #9	MKRN1 (ENSPLOG00000006377) ##11	RAB19 (ENSPLOG00000006421) #10	DENND2A (ENSPLOG00000006462) #12	ADCK2 (ENSPLOG00000006564) #13	NDUFB2 (ENSPLOG00000006615) #14	BRAF (ENSPLOG00000006659) #15	ENSPLOG00000006711	MRPS33 (ENSPLOG00000006727) #17	TMEM178B (ENSPLOG00000006748) #18	AGK (ENSPLOG00000006870) #19	DENND11 (ENSPLOG00000007062) #20	WEE2 (ENSPLOG00000007110)	SSBP1 (ENSPLOG00000007153) #22	TAS2R3 (ENSPLOG00000007169) #23	TAS2R4 (ENSPLOG00000007183) #24	PRSS37 (ENSPLOG00000007202) #25	ENSPLOG00000007235 #26	ENSPLOG00000007265 #26	OR9A4 (ENSPLOG00000007287)	CLEC5A (ENSPLOG00000007322) #27	TAS2R38 (ENSPLOG00000007379) #28	MGAM (ENSPLOG00000007975) #29	ENSPLOG00000010301	ENSPLOG00000010372	ENSPLOG00000010445	PRSS58 (ENSPLOG00000010461)	ENSPLOG00000010506	ENSPLOG00000010541
leopard	MODERN SPECIES	23	PARP12 (ENSPPRG00000024763) #7	KDM7A (ENSPPRG00000024771) #8	SLC37A3 (ENSPPRG00000024774) #9	RAB19 (ENSPPRG00000024782) #10	MKRN1 (ENSPPRG00000024785) ##11	DENND2A (ENSPPRG00000024795) #12	ADCK2 (ENSPPRG00000024802) #13	NDUFB2 (ENSPPRG00000024808) #14	BRAF (ENSPPRG00000024821) #15	ENSPPRG00000024823	MRPS33 (ENSPPRG00000024825) #17	TMEM178B (ENSPPRG00000024828) #18	ENSPPRG00000024832 #19	DENND11 (ENSPPRG00000024839) #20	WEE2 (ENSPPRG00000024844)	SSBP1 (ENSPPRG00000024849) #22	TAS2R3 (ENSPPRG00000019421) #23	TAS2R4 (ENSPPRG00000019408) #24	PRSS37 (ENSPPRG00000024857) #25	ENSPPRG00000019397	ENSPPRG00000019380	CLEC5A (ENSPPRG00000024864) #27	MGAM (ENSPPRG00000024877) #29	MGAM2 (ENSPPRG00000024888)	ENSPPRG00000024900	ENSPPRG00000019361	PRSS58 (ENSPPRG00000024903)	ENSPPRG00000024907	ENSPPRG00000024914	ENSPPRG00000024917	ENSPPRG00000019350
Cat	MODERN SPECIES	1	PARP12 (ENSFCAG00000026388) #7	KDM7A (ENSFCAG00000030285) #8	SLC37A3 (ENSFCAG00000013041) #9	MKRN1 (ENSFCAG00000024942) ##11	RAB19 (ENSFCAG00000043746) #10	DENND2A (ENSFCAG00000012839) #12	ADCK2 (ENSFCAG00000028490) #13	NDUFB2 (ENSFCAG00000036666) #14	BRAF (ENSFCAG00000012847) #15	ENSFCAG00000034313	MRPS33 (ENSFCAG00000029690) #17	TMEM178B (ENSFCAG00000040899) #18	AGK (ENSFCAG00000005448) #19	DENND11 (ENSFCAG00000018973) #20	WEE2 (ENSFCAG00000018517)	ENSFCAG00000035640 #22	PRSS37 (ENSFCAG00000006573) #25	OR9A1P (ENSFCAG00000042976) #26	OR9A4 (ENSFCAG00000046309)	CLEC5A (ENSFCAG00000008023) #27	TAS2R38 (ENSFCAG00000023407) #28	MGAM (ENSFCAG00000024379) #29	ENSFCAG00000018949	ENSFCAG00000022750	MOXD2 (ENSFCAG00000051435)	ENSFCAG00000028392	PRSS58 (ENSFCAG00000001368)	ENSFCAG00000024016	ENSFCAG00000052478	ENSFCAG00000049851	ENSFCAG00000050333
Caniformia	ANCESTRAL SPECIES	11	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413.d	ENSGT00940000163413.c	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b
Canidae	DUPLICATION
Canidae	ANCESTRAL SPECIES																	ENSGT00390000002796.y #22
Canis_lupus	ANCESTRAL SPECIES																	ENSGT00390000002796.y #22
Dog	MODERN SPECIES	8	CCT7 (ENSCAFG00845017858)	FBXO41 (ENSCAFG00845018174)	PRADC1 (ENSCAFG00845018255)	SMYD5 (ENSCAFG00845018316)	NOTO (ENSCAFG00845018376)	RAB11FIP5 (ENSCAFG00845018418)	SFXN5 (ENSCAFG00845018555)	EMX1 (ENSCAFG00845018828)	SPR (ENSCAFG00845018873)	EXOC6B (ENSCAFG00845018998)	CYP26B1 (ENSCAFG00845019592)	DYSF (ENSCAFG00845019878)	ZNF638 (ENSCAFG00845020789)	PAIP2B (ENSCAFG00845021756)	NAGK (ENSCAFG00845021892)	SSBP1 (ENSCAFG00845022014) #22	PHTF1 (ENSCAFG00845022110)	ENSCAFG00845022567	PTPN22 (ENSCAFG00845022702)	BCL2L15 (ENSCAFG00845023051)	AP4B1 (ENSCAFG00845023163)	DCLRE1B (ENSCAFG00845023268)	HIPK1 (ENSCAFG00845023430)	OLFML3 (ENSCAFG00845023748)	SYT6 (ENSCAFG00845023804)	ENSCAFG00845023874	TRIM33 (ENSCAFG00845024048)	BCAS2 (ENSCAFG00845024283)	DENND2C (ENSCAFG00845024386) ##12	AMPD1 (ENSCAFG00845025118)	NRAS (ENSCAFG00845026380)
Dingo	MODERN SPECIES	389	TBXAS1 (ENSCAFG00020022217)	PARP12 (ENSCAFG00020022200) #7	KDM7A (ENSCAFG00020022158) #8	SLC37A3 (ENSCAFG00020022145) #9	RAB19 (ENSCAFG00020022144) #10	ENSCAFG00020022139 ##11	DENND2A (ENSCAFG00020022101) #12	ADCK2 (ENSCAFG00020022086) #13	NDUFB2 (ENSCAFG00020022084) #14	BRAF (ENSCAFG00020021321) #15	ENSCAFG00020021206 #17	TMEM178B (ENSCAFG00020021193) #18	AGK (ENSCAFG00020021182) #19	DENND11 (ENSCAFG00020021162) #20	WEE2 (ENSCAFG00020021149)	SSBP1 (ENSCAFG00020021147) #22	TAS2R3 (ENSCAFG00020021146) #23	TAS2R4 (ENSCAFG00020021144) #24	TAS2R5 (ENSCAFG00020021140) ##28	PRSS37 (ENSCAFG00020021120) #25	OR9A1P (ENSCAFG00020021109) #26	ENSCAFG00020021108	ENSCAFG00020021104	TAS2R38 (ENSCAFG00020021100) #28	MGAM (ENSCAFG00020021057) #29	ENSCAFG00020021052	ENSCAFG00020021050	PRSS58 (ENSCAFG00020021048)	ENSCAFG00020021045	ENSCAFG00020021043	ENSCAFG00020021042
Canidae	ANCESTRAL SPECIES	49	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401.bb #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796.z #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413.d	ENSGT00940000163413.c	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a
Red fox	MODERN SPECIES	167	PARP12 (ENSVVUG00000001841) #7	KDM7A (ENSVVUG00000001798) #8	ENSVVUG00000001761	RAB19 (ENSVVUG00000001737) #10	MKRN1 (ENSVVUG00000001720) ##11	DENND2A (ENSVVUG00000001629) #12	ADCK2 (ENSVVUG00000001594) #13	NDUFB2 (ENSVVUG00000001582) #14	BRAF (ENSVVUG00000001562) #15	MRPS33 (ENSVVUG00000001526) #17	TMEM178B (ENSVVUG00000001378) #18	AGK (ENSVVUG00000027904) #19	DENND11 (ENSVVUG00000027896) #20	WEE2 (ENSVVUG00000027893)	PRSS37 (ENSVVUG00000027887) #25	SSBP1 (ENSVVUG00000027882) #22	CLEC5A (ENSVVUG00000027880) #27	TAS2R38 (ENSVVUG00000027879) #28	MGAM (ENSVVUG00000027858) #29	MGAM2 (ENSVVUG00000027701)	ENSVVUG00000027677	ENSVVUG00000027675	PRSS58 (ENSVVUG00000027673)	ENSVVUG00000027672	ENSVVUG00000027670	ENSVVUG00000027667	ENSVVUG00000027666	ENSVVUG00000027664	ENSVVUG00000027663	ENSVVUG00000027660	ENSVVUG00000027659
Canis_lupus	ANCESTRAL SPECIES	42	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401.bb #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796.z #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413.d	ENSGT00940000163413.c	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a
Dog	MODERN SPECIES	7	TBXAS1 (ENSCAFG00845031075)	PARP12 (ENSCAFG00845031074) #7	KDM7A (ENSCAFG00845031073) #8	SLC37A3 (ENSCAFG00845031071) #9	RAB19 (ENSCAFG00845031070) #10	MKRN1 (ENSCAFG00845031068) ##11	DENND2A (ENSCAFG00845031062) #12	ADCK2 (ENSCAFG00845031052) #13	NDUFB2 (ENSCAFG00845031044) #14	BRAF (ENSCAFG00845031038) #15	MRPS33 (ENSCAFG00845031033) #17	TMEM178B (ENSCAFG00845031029) #18	AGK (ENSCAFG00845030997) #19	DENND11 (ENSCAFG00845030968) #20	WEE2 (ENSCAFG00845030950)	SSBP1 (ENSCAFG00845030936) #22	TAS2R3 (ENSCAFG00845030932) #23	TAS2R4 (ENSCAFG00845030928) #24	TAS2R5 (ENSCAFG00845030924) ##28	PRSS37 (ENSCAFG00845030911) #25	ENSCAFG00845030869	OR9A4C (ENSCAFG00845030848)	OR9A4 (ENSCAFG00845030840)	ENSCAFG00845030818 #27	TAS2R38 (ENSCAFG00845030800) #28	MGAM (ENSCAFG00845024416) #29	MGAM2 (ENSCAFG00845020250)	MOXD2 (ENSCAFG00845020081)	ENSCAFG00845020044	PRSS58 (ENSCAFG00845019999)	ENSCAFG00845019855
Caniformia_b	ANCESTRAL SPECIES	9	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT01030000238403	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413.d	ENSGT00940000163413.c	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b
Mustelinae	ANCESTRAL SPECIES	9	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT01030000238403	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT01050000244883.A.a.a.a.b.l.b	ENSGT01020000230389.b.a.a.a.a	ENSGT00940000164718 #26	ENSGT00940000163413.d	ENSGT00940000163413.c	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00940000163043	ENSGT00530000063085.A.a
Ferret	MODERN SPECIES	168	PARP12 (ENSMPUG00000003682) #7	KDM7A (ENSMPUG00000003567) #8	SLC37A3 (ENSMPUG00000003468) #9	RAB19 (ENSMPUG00000003462) #10	MKRN1 (ENSMPUG00000003453) ##11	DENND2A (ENSMPUG00000003441) #12	ADCK2 (ENSMPUG00000003434) #13	ENSMPUG00000003423 #14	BRAF (ENSMPUG00000003411) #15	MRPS33 (ENSMPUG00000003408) #17	TMEM178B (ENSMPUG00000003400) #18	ENSMPUG00000003395	AGK (ENSMPUG00000003382) #19	DENND11 (ENSMPUG00000003339) #20	WEE2 (ENSMPUG00000003262)	SSBP1 (ENSMPUG00000003257) #22	TAS2R3 (ENSMPUG00000018738) #23	TAS2R5 (ENSMPUG00000018736) ##28	PRSS37 (ENSMPUG00000003229) #25	ENSMPUG00000003225	OR9A1P (ENSMPUG00000018734) #26	ENSMPUG00000018733	ENSMPUG00000018730	CLEC5A (ENSMPUG00000003222) #27	TAS2R38 (ENSMPUG00000018729) #28	MGAM (ENSMPUG00000003017) #29	ENSMPUG00000003013	ENSMPUG00000003007	ENSMPUG00000003004	ENSMPUG00000002940	PRSS58 (ENSMPUG00000002936)
American mink	MODERN SPECIES	3	PARP12 (ENSNVIG00000021615) #7	KDM7A (ENSNVIG00000021549) #8	SLC37A3 (ENSNVIG00000021517) #9	RAB19 (ENSNVIG00000021506) #10	MKRN1 (ENSNVIG00000021491) ##11	DENND2A (ENSNVIG00000021437) #12	ADCK2 (ENSNVIG00000021423) #13	NDUFB2 (ENSNVIG00000021401) #14	BRAF (ENSNVIG00000021330) #15	MRPS33 (ENSNVIG00000021319) #17	ENSNVIG00000021311	TMEM178B (ENSNVIG00000021305) #18	AGK (ENSNVIG00000021096) #19	DENND11 (ENSNVIG00000021077) #20	WEE2 (ENSNVIG00000021053)	SSBP (ENSNVIG00000021026) #22	TAS2R3 (ENSNVIG00000021023) #23	TAS2R4 (ENSNVIG00000021019) #24	TAS2R5 (ENSNVIG00000021015) ##28	PRSS37 (ENSNVIG00000021001) #25	OR9A1P (ENSNVIG00000021000) #26	OR9A4 (ENSNVIG00000020980)	CLEC5A (ENSNVIG00000020950) #27	TAS2R38 (ENSNVIG00000020941) #28	MGAM (ENSNVIG00000020823) #29	ENSNVIG00000020796	ENSNVIG00000020758	ENSNVIG00000020745	PRSS58 (ENSNVIG00000020715)	ENSNVIG00000020711	ENSNVIG00000020082
Ursidae	DUPLICATION
Ursidae	ANCESTRAL SPECIES	12	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT01030000238403	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796.`b #22	ENSGT00390000002796.ab #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000163595.c.a.b.a	ENSGT00940000154460.a	ENSGT01050000244883.A.a.a.a.b.l.c	ENSGT01020000230389.b.a.a.a.a	ENSGT00940000163413.d	ENSGT00940000164718 #26	ENSGT00940000163413.c	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29
Ursus	ANCESTRAL SPECIES	35	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT01030000238403	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796.`b #22	ENSGT00390000002796.ab #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413.c	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l.c.c
American black bear	MODERN SPECIES	6929															WEE2 (ENSUAMG00000014168)	SSBP1 (ENSUAMG00000014171) #22
Polar bear	MODERN SPECIES	326						CSMD1 (ENSUMAG00000023133)	MYOM2 (ENSUMAG00000023171)	ARHGEF10 (ENSUMAG00000023234)	CLN8 (ENSUMAG00000023287)	DLGAP2 (ENSUMAG00000023290)	ENSUMAG00000023332	TDRP (ENSUMAG00000023334)	FBXO25 (ENSUMAG00000023338)	ENSUMAG00000023340	ENSUMAG00000023344	ENSUMAG00000023345 #22	ZNF596 (ENSUMAG00000023347)	OR11A1 (ENSUMAG00000023351)	ENSUMAG00000023353	OR12D3 (ENSUMAG00000023356)	OR14J1 (ENSUMAG00000023357)	ENSUMAG00000023358	ENSUMAG00000023359	ENSUMAG00000023360	ENSUMAG00000023361	ENSUMAG00000023362	ENSUMAG00000023364	ENSUMAG00000023365	ENSUMAG00000023366	GPM6A (ENSUMAG00000023367)	WDR17 (ENSUMAG00000023369)
Giant Panda	MODERN SPECIES		TBXAS1 (ENSAMEG00000017877)	PARP12 (ENSAMEG00000017865) #7	KDM7A (ENSAMEG00000017856) #8	ENSAMEG00000017845	RAB19 (ENSAMEG00000017842) #10	MKRN1 (ENSAMEG00000017832) ##11	DENND2A (ENSAMEG00000017824) #12	ADCK2 (ENSAMEG00000017823) #13	NDUFB2 (ENSAMEG00000015328) #14	BRAF (ENSAMEG00000015264) #15	MRPS33 (ENSAMEG00000015259) #17	TMEM178B (ENSAMEG00000029552) #18	ENSAMEG00000015205 #19	DENND11 (ENSAMEG00000015190) #20	WEE2 (ENSAMEG00000015162)	SSBP1 (ENSAMEG00000015145) #22	TAS2R3 (ENSAMEG00000019797) #23	TAS2R4 (ENSAMEG00000019793) #24	PRSS37 (ENSAMEG00000015123) #25	ENSAMEG00000015114	OR9A4 (ENSAMEG00000028272)	CLEC5A (ENSAMEG00000024594) #27	TAS2R38 (ENSAMEG00000015098) #28	ENSAMEG00000014965 #29	ENSAMEG00000014963	ENSAMEG00000014918	ENSAMEG00000028202	PRSS58 (ENSAMEG00000014895)	ENSAMEG00000014890	ENSAMEG00000006287	TRBV2 (ENSAMEG00000023747)
Ursidae	ANCESTRAL SPECIES	12	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT01030000238403	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796.`b #22	ENSGT00390000002796.ab #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000163595.c.a.b.a	ENSGT00940000154460.a	ENSGT01050000244883.A.a.a.a.b.l.c	ENSGT01020000230389.b.a.a.a.a	ENSGT00940000163413.d	ENSGT00940000164718 #26	ENSGT00940000163413.c	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091
Ursus	ANCESTRAL SPECIES	35	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT01030000238403	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796.`b #22	ENSGT00390000002796.ab #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413.c	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l.c.c	ENSGT01050000244883.A.a.a.a.b.l.c.d
Polar bear	MODERN SPECIES	205	PARP12 (ENSUMAG00000015082) #7	KDM7A (ENSUMAG00000015072) #8	ENSUMAG00000015059	RAB19 (ENSUMAG00000015057) #10	MKRN1 (ENSUMAG00000015046) ##11	DENND2A (ENSUMAG00000015036) #12	ADCK2 (ENSUMAG00000015028) #13	NDUFB2 (ENSUMAG00000015021) #14	BRAF (ENSUMAG00000015019) #15	MRPS33 (ENSUMAG00000015017) #17	ENSUMAG00000015014	TMEM178B (ENSUMAG00000015005) #18	AGK (ENSUMAG00000014998) #19	DENND11 (ENSUMAG00000014996) #20	WEE2 (ENSUMAG00000014990)	ENSUMAG00000014987 #22	TAS2R3 (ENSUMAG00000014985) #23	TAS2R4 (ENSUMAG00000014982) #24	TAS2R5 (ENSUMAG00000014980) ##28	PRSS37 (ENSUMAG00000014967) #25	ENSUMAG00000014960	OR9A1P (ENSUMAG00000014949) #26	OR9A4 (ENSUMAG00000014934)	CLEC5A (ENSUMAG00000014912) #27	TAS2R38 (ENSUMAG00000014900) #28	MGAM (ENSUMAG00000012557) #29	ENSUMAG00000012289	ENSUMAG00000012286	PRSS58 (ENSUMAG00000012282)	ENSUMAG00000012275	ENSUMAG00000012263
Laurasiatheria_c	ANCESTRAL SPECIES	13	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l
Chiroptera	ANCESTRAL SPECIES	41	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28
Microchiroptera	ANCESTRAL SPECIES	23	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163139	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.b ##11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b #23	ENSGT01100000263477.C #24	ENSGT01100000263477.A.a.b ##28	ENSGT00940000161483 #25	ENSGT00910000144330 #27	ENSGT01100000263477.A.a.a #28	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT00940000153130.b	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000164097	ENSGT00940000154270.a.a
Greater horseshoe bat	MODERN SPECIES	18	PARP12 (ENSRFEG00010006269) #7	KDM7A (ENSRFEG00010006211) #8	ENSRFEG00010006138	RAB19 (ENSRFEG00010006080) #10	ENSRFEG00010006001 ##11	DENND2A (ENSRFEG00010021027) #12	ADCK2 (ENSRFEG00010020985) #13	ENSRFEG00010020971	NDUFB2 (ENSRFEG00010020950) #14	BRAF (ENSRFEG00010020876) #15	MRPS33 (ENSRFEG00010020851) #17	TMEM178B (ENSRFEG00010020840) #18	AGK (ENSRFEG00010020764) #19	DENND11 (ENSRFEG00010020723) #20	WEE2 (ENSRFEG00010020683)	SSBP1 (ENSRFEG00010020645) #22	TAS2R3 (ENSRFEG00010020628) #23	TAS2R4 (ENSRFEG00010020619) #24	PRSS37 (ENSRFEG00010020580) #25	CLEC5A (ENSRFEG00010020445) #27	TAS2R38 (ENSRFEG00010020417) #28	MGAM (ENSRFEG00010011361) #29	ENSRFEG00010010486	ENSRFEG00010010272	ENSRFEG00010010246	PRSS58 (ENSRFEG00010010194)	ENSRFEG00010010175	ENSRFEG00010010153	TRBV3-1 (ENSRFEG00010010134)	TRBV9 (ENSRFEG00010010109)	ENSRFEG00010010095
Microbat	MODERN SPECIES	1078	RAB19 (ENSMLUG00000002031) #10	ENSMLUG00000006053 ##11	DENND2A (ENSMLUG00000006056) #12	ENSMLUG00000029101	ADCK2 (ENSMLUG00000007534) #13	NDUFB2 (ENSMLUG00000014604) #14	BRAF (ENSMLUG00000007544) #15	ENSMLUG00000013994 #17	ENSMLUG00000026797 #18	ENSMLUG00000030661	ENSMLUG00000007083	ENSMLUG00000030506 #18	AGK (ENSMLUG00000007092) #19	DENND11 (ENSMLUG00000007121) #20	WEE2 (ENSMLUG00000029750)	SSBP1 (ENSMLUG00000007133) #22	TAS2R3 (ENSMLUG00000007928) #23	TAS2R4 (ENSMLUG00000028078) #24	TAS2R5 (ENSMLUG00000006021) ##28	PRSS37 (ENSMLUG00000006019) #25	ENSMLUG00000023258	OR9A1P (ENSMLUG00000027938) #26	CLEC5A (ENSMLUG00000017259) #27	TAS2R38 (ENSMLUG00000013296) #28	MGAM (ENSMLUG00000017263) #29	ENSMLUG00000008548	ENSMLUG00000029346	PRSS58 (ENSMLUG00000016816)	ENSMLUG00000029306	ENSMLUG00000024021	ENSMLUG00000022214
Megabat	MODERN SPECIES	2886													AGK (ENSPVAG00000006217) #19	DENND11 (ENSPVAG00000006219) #20	WEE2 (ENSPVAG00000006220)	SSBP1 (ENSPVAG00000006221) #22
Equus	ANCESTRAL SPECIES	13	ENSGT00940000157903	ENSGT00940000154649.B #7	ENSGT00940000158039 #8	ENSGT00940000163296 #9	ENSGT00940000156717 #10	ENSGT00950000183077.a.a.a.a.a.a #11	ENSGT00950000182931.B.a.a #12	ENSGT00390000001536 #13	ENSGT00390000004044 #14	ENSGT00940000156154 #15	ENSGT00390000011401 #17	ENSGT00390000015299.a.b.b.a #18	ENSGT00940000154961 #19	ENSGT00590000083189 #20	ENSGT00940000158803	ENSGT00390000002796 #22	ENSGT00940000161483 #25	ENSGT00940000164718 #26	ENSGT00940000163413	ENSGT00910000144330 #27	ENSGT00940000161540 #29	ENSGT00940000163091	ENSGT00530000063085.A.a	ENSGT01020000230389.b.a.a.a.b	ENSGT01020000230389.b.a.a.a.a	ENSGT00730000111153.oc	ENSGT01050000244883.A.a.a.a.a.d	ENSGT00940000162480.a.d.a	ENSGT00940000163595.c.b.b	ENSGT01050000244883.A.a.a.a.b.l	ENSGT00940000164097.h.b
Donkey	DUPLICATION
Donkey	MODERN SPECIES	7	DPYD (ENSEASG00005015723)	PTBP2 (ENSEASG00005015719)	RWDD3 (ENSEASG00005015716)	TLCD4 (ENSEASG00005026339)	ALG14 (ENSEASG00005034081)	CNN3 (ENSEASG00005032123)	SLC44A3 (ENSEASG00005015701)	F3 (ENSEASG00005015695)	ABCD3 (ENSEASG00005015685)	ARHGAP29 (ENSEASG00005015647)	ABCA4 (ENSEASG00005015609)	GCLM (ENSEASG00005015597)	DNTTIP2 (ENSEASG00005015594)	BCAR3 (ENSEASG00005015591)	FNBP1L (ENSEASG00005015587)	ENSEASG00005015589 #22	DR1 (ENSEASG00005025520)	ENSEASG00005015583	CCDC18 (ENSEASG00005015570)	TMED5 (ENSEASG00005034283)	MTF2 (ENSEASG00005015530)	DIPK1A (ENSEASG00005030243)	ENSEASG00005015515	EVI5 (ENSEASG00005015514)	GFI1 (ENSEASG00005015509)	RPAP2 (ENSEASG00005015507)	GLMN (ENSEASG00005015506)	C1orf146 (ENSEASG00005037463)	ENSEASG00005032361	ENSEASG00005037362	ENSEASG00005015501
Donkey	MODERN SPECIES		PARP12 (ENSEASG00005009926) #7	KDM7A (ENSEASG00005009924) #8	SLC37A3 (ENSEASG00005009922) #9	RAB19 (ENSEASG00005009919) #10	MKRN1 (ENSEASG00005009917) #11	DENND2A (ENSEASG00005009911) #12	ADCK2 (ENSEASG00005009907) #13	NDUFB2 (ENSEASG00005009906) #14	BRAF (ENSEASG00005009899) #15	MRPS33 (ENSEASG00005009896) #17	TMEM178B (ENSEASG00005009886) #18	ENSEASG00005009882	AGK (ENSEASG00005009879) #19	DENND11 (ENSEASG00005009876) #20	WEE2 (ENSEASG00005009874)	ENSEASG00005009871 #22	PRSS37 (ENSEASG00005009865) #25	OR9A1P (ENSEASG00005032409) #26	OR9A4 (ENSEASG00005033752)	CLEC5A (ENSEASG00005009851) #27	ENSEASG00005009837 #29	MGAM2 (ENSEASG00005030719)	ENSEASG00005009818	ENSEASG00005030688	PRSS58 (ENSEASG00005009810)	ENSEASG00005009806	ENSEASG00005035145	ENSEASG00005036533	ENSEASG00005009470	ENSEASG00005031156	ENSEASG00005036725