Euarchontoglires	ANCESTRAL SPECIES	13	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00940000163043 #27	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31
Euarchontoglires_A	ANCESTRAL SPECIES	17	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00940000163043 #27	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a #32
Glires	ANCESTRAL SPECIES	18	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00940000163043 #27	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a #32	ENSGT00940000162509.l
Rodentia	ANCESTRAL SPECIES	12	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163043 #27	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##32
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.b #8	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163043 #27	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.l #33
Hystricomorpha	ANCESTRAL SPECIES	35	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.b #8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163043 #27	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.l #33	ENSGT00940000154460.a	ENSGT00940000163545.a
Hystricomorpha_a	ANCESTRAL SPECIES	40	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.b #8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163043 #27	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a #32	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##32	ENSGT00940000163545.a	ENSGT00940000162480.b
Hystricomorpha_b	ANCESTRAL SPECIES	40	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.b #8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT00940000161483 #23	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163043 #27	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a #32	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##32	ENSGT01050000244883.A.a.a.b.x.m #36	ENSGT00940000156687.g #37	ENSGT00940000160399.d	ENSGT00940000161809
Long-tailed chinchilla	MODERN SPECIES	201	SLC37A3 (ENSCLAG00000001923) #7	MKRN1 (ENSCLAG00000001783) #8	ENSCLAG00000001763 #9	DENND2A (ENSCLAG00000001519) #10	ADCK2 (ENSCLAG00000001471) #11	NDUFB2 (ENSCLAG00000001447) #12	ENSCLAG00000001414 #13	ENSCLAG00000001297 #14	ENSCLAG00000001167 #15	MRPS33 (ENSCLAG00000001134) #16	ENSCLAG00000001114 #17	AGK (ENSCLAG00000001071) #18	DENND11 (ENSCLAG00000001043) #19	ENSCLAG00000001751 #20	WEE2 (ENSCLAG00000009356) #21	SSBP1 (ENSCLAG00000009247) #22	PRSS37 (ENSCLAG00000008886) #23	CLEC5A (ENSCLAG00000008820) #24	TAS2R38 (ENSCLAG00000008669) #25	ENSCLAG00000007384 #26	ENSCLAG00000003350 #27	ENSCLAG00000003095 #28	ENSCLAG00000003077 #29	PRSS58 (ENSCLAG00000002996) #30	ENSCLAG00000001949 #31	ENSCLAG00000001291 #32	ENSCLAG00000001271 #33	ENSCLAG00000001180 #34	ENSCLAG00000001157 #35	ENSCLAG00000001113 #36	TRPV6 (ENSCLAG00000001066) #37
Degu	DUPLICATION
Degu	MODERN SPECIES	84	FAM107A (ENSODEG00000009417)	ACOX2 (ENSODEG00000009665)	KCTD6 (ENSODEG00000009456)	PDHB (ENSODEG00000011071)	PXK (ENSODEG00000009061)	ENSODEG00000010715	ABHD6 (ENSODEG00000008297)	ENSODEG00000010685	METTL6 (ENSODEG00000008650)	EAF1 (ENSODEG00000008752)	COLQ (ENSODEG00000009333)	HACL1 (ENSODEG00000007866)	ENSODEG00000019451	SH3BP5 (ENSODEG00000013984)	CAPN7 (ENSODEG00000009154)	ENSODEG00000008798 #22	DNAH1 (ENSODEG00000008443)	BAP1 (ENSODEG00000008927)	PHF7 (ENSODEG00000008416)	SEMA3G (ENSODEG00000010653)	ENSODEG00000010480	NISCH (ENSODEG00000007768)	ENSODEG00000007867	ENSODEG00000008276	NT5DC2 (ENSODEG00000008156)	UQCC5 (ENSODEG00000007436)	ENSODEG00000019639	ENSODEG00000009139	PBRM1 (ENSODEG00000008265)	GNL3 (ENSODEG00000009492)	ENSODEG00000007760
Degu	MODERN SPECIES	68	ENSODEG00000014445	ENSODEG00000014675	RAB19 (ENSODEG00000013764)	ENSODEG00000013658 #8	ENSODEG00000013390 #10	ENSODEG00000014071 #11	NDUFB2 (ENSODEG00000013607) #12	BRAF (ENSODEG00000013401) #14	ENSODEG00000012846	ENSODEG00000014878	ENSODEG00000013320	ENSODEG00000013547 #17	AGK (ENSODEG00000015489) #18	DENND11 (ENSODEG00000013048) #19	ENSODEG00000013142 #21	ENSODEG00000013367 #22	PRSS37 (ENSODEG00000013473) #23	CLEC5A (ENSODEG00000013699) #24	ENSODEG00000014828 #26	ENSODEG00000013408 #27	ENSODEG00000012690 #28	PRSS58 (ENSODEG00000013832) #30	ENSODEG00000013684 #31	ENSODEG00000012923 ##32	ENSODEG00000012554 #32	ENSODEG00000013222 ##32	ENSODEG00000014167	ENSODEG00000012766 #36	TRPV6 (ENSODEG00000015340) #37	EPHB6 (ENSODEG00000012570)	TRPV5 (ENSODEG00000014153)
Guinea pig	MODERN SPECIES	10	TBXAS1 (ENSCPOG00000000064)	PARP12 (ENSCPOG00000011210)	KDM7A (ENSCPOG00000011219)	ENSCPOG00000003740	RAB19 (ENSCPOG00000031937)	MKRN1 (ENSCPOG00000000948) #8	DENND2A (ENSCPOG00000030550) #10	ADCK2 (ENSCPOG00000031703) #11	NDUFB2 (ENSCPOG00000025368) #12	BRAF (ENSCPOG00000021487) #14	MRPS33 (ENSCPOG00000038792) #16	ENSCPOG00000020150 #17	AGK (ENSCPOG00000015447) #18	DENND11 (ENSCPOG00000015452) #19	ENSCPOG00000025291 #21	SSBP1 (ENSCPOG00000040289) #22	TAS2R3 (ENSCPOG00000007635) ##25	TAS2R4 (ENSCPOG00000026813) ##25	PRSS37 (ENSCPOG00000004461) #23	CLEC5A (ENSCPOG00000039585) #24	MGAM (ENSCPOG00000011280) #26	ENSCPOG00000039963 #27	MGAM2 (ENSCPOG00000009935)	PRSS58 (ENSCPOG00000006756) #30	ENSCPOG00000021713 #31	ENSCPOG00000026673 #33	ENSCPOG00000010598	ENSCPOG00000025586	ENSCPOG00000032580	ENSCPOG00000038762	ENSCPOG00000038847
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	6	ENSHGLG00000005137	PLCB1 (ENSHGLG00000017610)	ENSHGLG00000044330	PLCB4 (ENSHGLG00000018217)	LAMP5 (ENSHGLG00000036148)	ENSHGLG00000032981	PAK5 (ENSHGLG00000016050)	ENSHGLG00000046856	ANKEF1 (ENSHGLG00000017245)	ENSHGLG00000016926	ENSHGLG00000033517	ISM1 (ENSHGLG00000043849)	TASP1 (ENSHGLG00000016276)	ESF1 (ENSHGLG00000011505)	NDUFAF5 (ENSHGLG00000012482)	ENSHGLG00000021400 #22	ENSHGLG00000017747	ENSHGLG00000037190	FLRT3 (ENSHGLG00000016173)	ENSHGLG00000032467	ENSHGLG00000017926	ENSHGLG00000016849	SNRPB2 (ENSHGLG00000006969)	OTOR (ENSHGLG00000008576)	ENSHGLG00000005046	ENSHGLG00000020281	ENSHGLG00000018289	BANF2 (ENSHGLG00000015254)	SNX5 (ENSHGLG00000017606)	OVOL2 (ENSHGLG00000045118)	PET117 (ENSHGLG00000016254)
Naked mole-rat female	MODERN SPECIES	17	ENSHGLG00000009494	RAB19 (ENSHGLG00000010948)	ENSHGLG00000044578 #8	ENSHGLG00000040747	ENSHGLG00000043500	DENND2A (ENSHGLG00000014310) #10	ADCK2 (ENSHGLG00000037504) #11	ENSHGLG00000017933 #12	BRAF (ENSHGLG00000014168) #14	ENSHGLG00000049810	ENSHGLG00000040990 #16	TMEM178B (ENSHGLG00000043245) #17	AGK (ENSHGLG00000046237) #18	DENND11 (ENSHGLG00000010322) #19	ENSHGLG00000011701 #21	ENSHGLG00000009362 #22	TAS2R4 (ENSHGLG00000039087) ##25	PRSS37 (ENSHGLG00000006169) #23	CLEC5A (ENSHGLG00000041574) #24	TAS2R38 (ENSHGLG00000008887) #25	MGAM (ENSHGLG00000009763) #26	ENSHGLG00000036048 #26	ENSHGLG00000012020	ENSHGLG00000004421 #28	ENSHGLG00000006188	SEMA4D (ENSHGLG00000007257)	ENSHGLG00000008542	ENSHGLG00000014380	CKS2 (ENSHGLG00000008721)	SHC3 (ENSHGLG00000009124)	ENSHGLG00000032550
Sciuridae	ANCESTRAL SPECIES	7	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.b #8	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.b.b ##32	ENSGT00940000162480.a
Marmotini	ANCESTRAL SPECIES	32	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401.y.a #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.b.b ##32	ENSGT01050000244883.A.a.a.a.b.k.a.b.b.a.a.c.b ##32	ENSGT01050000244883.A.a.a.a.b.k.a.b.b.a.a.c.a ##32
Alpin marmot	MODERN SPECIES	35	PARP12 (ENSMMMG00000011607)	KDM7A (ENSMMMG00000011574)	ENSMMMG00000011544	MKRN1 (ENSMMMG00000011534) ##8	DENND2A (ENSMMMG00000011518) #10	ADCK2 (ENSMMMG00000011466) #11	NDUFB2 (ENSMMMG00000011455) #12	BRAF (ENSMMMG00000011443) #14	ENSMMMG00000011427 #16	ENSMMMG00000011416	ENSMMMG00000011406 #16	TMEM178B (ENSMMMG00000011372) #17	AGK (ENSMMMG00000011318) #18	DENND11 (ENSMMMG00000011283) #19	WEE2 (ENSMMMG00000011258) #21	SSBP1 (ENSMMMG00000011224) #22	ENSMMMG00000011214 ##25	TAS2R4 (ENSMMMG00000011210) ##25	ENSMMMG00000011201 ##25	PRSS37 (ENSMMMG00000011182) #23	OR9A1P (ENSMMMG00000011173)	OR9A4 (ENSMMMG00000011167)	CLEC5A (ENSMMMG00000011125) #24	MGAM (ENSMMMG00000010862) #26	MGAM2 (ENSMMMG00000009935)	ENSMMMG00000009899 #28	PRSS58 (ENSMMMG00000009890) #30	ENSMMMG00000009883 #31	ENSMMMG00000009748 ##32	ENSMMMG00000008868 ##32	ENSMMMG00000008499 ##32
Marmotini_b	ANCESTRAL SPECIES	117	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139.i	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401.y.a #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT00940000161540 #26
Squirrel	MODERN SPECIES	192	CLEC2L (ENSSTOG00000021797)	HIPK2 (ENSSTOG00000005957)	TBXAS1 (ENSSTOG00000004552)	PARP12 (ENSSTOG00000004578)	KDM7A (ENSSTOG00000012789)	ENSSTOG00000010929	ENSSTOG00000031161 #8	DENND2A (ENSSTOG00000002912) #10	ADCK2 (ENSSTOG00000002559) #11	NDUFB2 (ENSSTOG00000002566) #12	BRAF (ENSSTOG00000002569) #14	ENSSTOG00000001019 #16	TMEM178B (ENSSTOG00000023428) #17	AGK (ENSSTOG00000020008) #18	DENND11 (ENSSTOG00000006980) #19	SSBP1 (ENSSTOG00000007007) #22	PRSS37 (ENSSTOG00000014505) #23	OR9A4 (ENSSTOG00000028119)	CLEC5A (ENSSTOG00000015960) #24	ENSSTOG00000003319 #26
Arctic ground squirrel	MODERN SPECIES	318	PARP12 (ENSUPAG00010015611)	KDM7A (ENSUPAG00010015626)	ENSUPAG00010015737	RAB19 (ENSUPAG00010015754)	MKRN1 (ENSUPAG00010015763) ##8	DENND2A (ENSUPAG00010015818) #10	ADCK2 (ENSUPAG00010015851) #11	NDUFB2 (ENSUPAG00010015866) #12	BRAF (ENSUPAG00010015886) #14	ENSUPAG00010015929	MRPS33 (ENSUPAG00010015943) #16	TMEM178B (ENSUPAG00010015946) #17	AGK (ENSUPAG00010015967) #18	DENND11 (ENSUPAG00010015983) #19	WEE2 (ENSUPAG00010015989) #21	SSBP1 (ENSUPAG00010016004) #22	ENSUPAG00010016035 ##25	TAS2R4 (ENSUPAG00010016043) ##25	ENSUPAG00010016047 ##25	PRSS37 (ENSUPAG00010016052) #23	OR9A1P (ENSUPAG00010016064)	OR9A4 (ENSUPAG00010016069)	CLEC5A (ENSUPAG00010016074) #24	MGAM (ENSUPAG00010016104) #26
Eurasian red squirrel	MODERN SPECIES	17	KDM7A (ENSSVLG00005012470)	ENSSVLG00005012379	RAB19 (ENSSVLG00005012313)	ENSSVLG00005012241 #8	ENSSVLG00005012011 ##8	DENND2A (ENSSVLG00005011668) #10	ADCK2 (ENSSVLG00005011400) #11	NDUFB2 (ENSSVLG00005011276) #12	BRAF (ENSSVLG00005011137) #14	ENSSVLG00005011057	MRPS33 (ENSSVLG00005011000) #16	TMEM178B (ENSSVLG00005010943) #17	AGK (ENSSVLG00005010726) #18	DENND11 (ENSSVLG00005010569) #19	ENSSVLG00005010476 #21	SSBP1 (ENSSVLG00005010423) #22	ENSSVLG00005010410 ##25	ENSSVLG00005010344 ##25	PRSS37 (ENSSVLG00005010291) #23	OR9A1P (ENSSVLG00005010283)	OR9A4 (ENSSVLG00005010273)	CLEC5A (ENSSVLG00005010134) #24	TAS2R38 (ENSSVLG00005010093) #25	MGAM (ENSSVLG00005009048) #26	ENSSVLG00005008783	ENSSVLG00005008706 #28	PRSS58 (ENSSVLG00005017027) #30	ENSSVLG00005016942 #31	ENSSVLG00005016228 ##32	ENSSVLG00005016073 ##32	ENSSVLG00005015340 ##32
Rodentia_B	ANCESTRAL SPECIES	9	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##32	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a #32
Myomorpha	ANCESTRAL SPECIES	8	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##32	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a #32
Muroidea	ANCESTRAL SPECIES	8	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a #32	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##32
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##32	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a #32
Murinae	ANCESTRAL SPECIES	4	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##32	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a #32
Mus	ANCESTRAL SPECIES	20	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##32	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a #32
Mus_A	ANCESTRAL SPECIES	7	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401.s #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##32	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a #32
Ryukyu mouse	MODERN SPECIES	15	Parp12 (MGP_CAROLIEiJ_G0028242)	MGP_CAROLIEiJ_G0028243	MGP_CAROLIEiJ_G0028244	Rab19 (MGP_CAROLIEiJ_G0028245)	Mkrn1 (MGP_CAROLIEiJ_G0028246) ##8	Dennd2a (MGP_CAROLIEiJ_G0028247) #10	Adck2 (MGP_CAROLIEiJ_G0028248) #11	MGP_CAROLIEiJ_G0028249 #11	Ndufb2 (MGP_CAROLIEiJ_G0028250) #12	Braf (MGP_CAROLIEiJ_G0028251) #14	Mrps33 (MGP_CAROLIEiJ_G0028252) #16	MGP_CAROLIEiJ_G0028253 #17	Agk (MGP_CAROLIEiJ_G0028254) #18	Dennd11 (MGP_CAROLIEiJ_G0028255) #19	Wee2 (MGP_CAROLIEiJ_G0028256) #21	Ssbp1 (MGP_CAROLIEiJ_G0028257) #22	MGP_CAROLIEiJ_G0028258	Tas2r108 (MGP_CAROLIEiJ_G0028259) ##25	Prss37 (MGP_CAROLIEiJ_G0028260) #23	Or9a7 (MGP_CAROLIEiJ_G0028261)	Or9a4 (MGP_CAROLIEiJ_G0028262)	Clec5a (MGP_CAROLIEiJ_G0028263) #24	Tas2r138 (MGP_CAROLIEiJ_G0028264) #25	MGP_CAROLIEiJ_G0028265 #26	Moxd2 (MGP_CAROLIEiJ_G0028266) #28	Trbv1 (MGP_CAROLIEiJ_G0002243) #29	Prss58 (MGP_CAROLIEiJ_G0028267) #30	Prss59 (MGP_CAROLIEiJ_G0028268) #31	MGP_CAROLIEiJ_G0028269 ##32	MGP_CAROLIEiJ_G0028270 #32	MGP_CAROLIEiJ_G0028271 #32
Mus_B	ANCESTRAL SPECIES	20	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401.s #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##32	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a #32
Mus_C	ANCESTRAL SPECIES	19	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401.s #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##32	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a #32	ENSGT01050000244883.A.a.a.a.b.k.b ##32
spretus	MODERN SPECIES	15	Parp12 (MGP_SPRETEiJ_G0029241)	Kdm7a (MGP_SPRETEiJ_G0029242)	Slc37a3 (MGP_SPRETEiJ_G0029243)	Rab19 (MGP_SPRETEiJ_G0029244)	Mkrn1 (MGP_SPRETEiJ_G0029245) ##8	Dennd2a (MGP_SPRETEiJ_G0029246) #10	Adck2 (MGP_SPRETEiJ_G0029247) #11	MGP_SPRETEiJ_G0029248 #11	Ndufb2 (MGP_SPRETEiJ_G0029249) #12	Braf (MGP_SPRETEiJ_G0029250) #14	Mrps33 (MGP_SPRETEiJ_G0029251) #16	MGP_SPRETEiJ_G0029252 #17	Agk (MGP_SPRETEiJ_G0029253) #18	Dennd11 (MGP_SPRETEiJ_G0029254) #19	Wee2 (MGP_SPRETEiJ_G0029255) #21	Ssbp1 (MGP_SPRETEiJ_G0029256) #22	MGP_SPRETEiJ_G0029257	Tas2r108 (MGP_SPRETEiJ_G0029258) ##25	Prss37 (MGP_SPRETEiJ_G0029259) #23	MGP_SPRETEiJ_G0029260	Or9a4 (MGP_SPRETEiJ_G0029261)	Clec5a (MGP_SPRETEiJ_G0029262) #24	Tas2r138 (MGP_SPRETEiJ_G0029263) #25	MGP_SPRETEiJ_G0029264 #26	Moxd2 (MGP_SPRETEiJ_G0029265) #28	Trbv1 (MGP_SPRETEiJ_G0002397) #29	Prss58 (MGP_SPRETEiJ_G0029266) #30	Prss59 (MGP_SPRETEiJ_G0029267) #31	MGP_SPRETEiJ_G0029268 ##32	MGP_SPRETEiJ_G0029269 #32	MGP_SPRETEiJ_G0029270 #32
Steppe mouse	MODERN SPECIES	3159	Parp12 (ENSMSIG00000003821)	Kdm7a (ENSMSIG00000003734)	Slc37a3 (ENSMSIG00000003657)	Rab19 (ENSMSIG00000003633)	Mkrn1 (ENSMSIG00000003580) ##8	ENSMSIG00000003618	Dennd2a (ENSMSIG00000003496) #10	Adck2 (ENSMSIG00000003366) #11	Ndufb2 (ENSMSIG00000003342) #12	Braf (ENSMSIG00000003138) #14	ENSMSIG00000003115 #16	ENSMSIG00000003101 #17	Agk (ENSMSIG00000003072) #18	Dennd11 (ENSMSIG00000003036) #19	Wee2 (ENSMSIG00000002990) #21	Ssbp1 (ENSMSIG00000002905) #22	Tas2r137 (ENSMSIG00000002897) ##25	Tas2r108 (ENSMSIG00000002885) ##25	Prss37 (ENSMSIG00000002853) #23	Or9a7 (ENSMSIG00000002837)	Clec5a (ENSMSIG00000002705) #24	Tas2r138 (ENSMSIG00000002690) #25	ENSMSIG00000002337 #26	ENSMSIG00000001963	Moxd2 (ENSMSIG00000001914) #28	Trbv1 (ENSMSIG00000001891) #29	Prss59 (ENSMSIG00000001848) #31	ENSMSIG00000001830 ##32
Mouse	MODERN SPECIES	15	Tbxas1 (ENSMUSG00000029925)	Parp12 (ENSMUSG00000038507)	Kdm7a (ENSMUSG00000042599)	Slc37a3 (ENSMUSG00000029924)	Rab19 (ENSMUSG00000029923)	Mkrn1 (ENSMUSG00000029922) ##8	Dennd2a (ENSMUSG00000038456) #10	Adck2 (ENSMUSG00000046947) #11	Ndufb2 (ENSMUSG00000002416) #12	Braf (ENSMUSG00000002413) #14	Mrps33 (ENSMUSG00000029918) #16	Tmem178b (ENSMUSG00000057716) #17	Agk (ENSMUSG00000029916) #18	Dennd11 (ENSMUSG00000037172) #19	Wee2 (ENSMUSG00000037159) #21	Ssbp1 (ENSMUSG00000029911) #22	Tas2r137 (ENSMUSG00000052850) ##25	Tas2r108 (ENSMUSG00000037140) ##25	Prss37 (ENSMUSG00000029909) #23	Or9a7 (ENSMUSG00000068259)	Or9a4 (ENSMUSG00000045514)	Clec5a (ENSMUSG00000029915) #24	Tas2r138 (ENSMUSG00000058250) #25	Mgam (ENSMUSG00000068587) #26	Mgam2-ps (ENSMUSG00000102802)	Moxd2 (ENSMUSG00000029885) #28	Trbv1 (ENSMUSG00000076461) #29	Prss58 (ENSMUSG00000051936) #30	Prss59 (ENSMUSG00000029883) #31	1810009J06Rik (ENSMUSG00000094808) #32	Gm2663 (ENSMUSG00000096525) #32
Shrew mouse	MODERN SPECIES	11	Parp12 (MGP_PahariEiJ_G0022000)	Kdm7a (MGP_PahariEiJ_G0022001)	MGP_PahariEiJ_G0022002	Rab19 (MGP_PahariEiJ_G0022003)	Mkrn1 (MGP_PahariEiJ_G0022004) ##8	Dennd2a (MGP_PahariEiJ_G0022005) #10	Adck2 (MGP_PahariEiJ_G0022006) #11	MGP_PahariEiJ_G0022007 #11	Ndufb2 (MGP_PahariEiJ_G0022008) #12	Braf (MGP_PahariEiJ_G0022009) #14	Mrps33 (MGP_PahariEiJ_G0022010) #16	MGP_PahariEiJ_G0022011 #17	Agk (MGP_PahariEiJ_G0022012) #18	Dennd11 (MGP_PahariEiJ_G0022013) #19	Wee2 (MGP_PahariEiJ_G0022014) #21	Ssbp1 (MGP_PahariEiJ_G0022015) #22	MGP_PahariEiJ_G0022016	Tas2r108 (MGP_PahariEiJ_G0022017) ##25	Prss37 (MGP_PahariEiJ_G0022018) #23	Or9a4 (MGP_PahariEiJ_G0022019)	Clec5a (MGP_PahariEiJ_G0022020) #24	Tas2r138 (MGP_PahariEiJ_G0022021) #25	MGP_PahariEiJ_G0022022 #26	Moxd2 (MGP_PahariEiJ_G0022023) #28	Trbv1 (MGP_PahariEiJ_G0002045) #29	Prss58 (MGP_PahariEiJ_G0022024) #30	Prss59 (MGP_PahariEiJ_G0022025) #31	MGP_PahariEiJ_G0022026 ##32	MGP_PahariEiJ_G0022027 #32	MGP_PahariEiJ_G0022028 #32	Prss3b (MGP_PahariEiJ_G0022029) ##32
Rat	MODERN SPECIES	14	Tbxas1 (ENSRNOG00000007918)	Parp12 (ENSRNOG00000008196)	Kdm7a (ENSRNOG00000052445)	Chmp4bl1 (ENSRNOG00000034071)	Slc37a3 (ENSRNOG00000008725)	Rab19 (ENSRNOG00000009030)	Mkrn1 (ENSRNOG00000009280) ##8	Dennd2a (ENSRNOG00000026748) #10	Ndufb2 (ENSRNOG00000010005) #11	Braf (ENSRNOG00000010957) #14	Mrps33 (ENSRNOG00000026528) #16	Tmem178b (ENSRNOG00000047635) #17	Agk (ENSRNOG00000011509) #18	Dennd11 (ENSRNOG00000011854) #19	Wee2 (ENSRNOG00000026446) #21	Ssbp1 (ENSRNOG00000012100) #22	Tas2r137 (ENSRNOG00000030413) ##25	Tas2r108 (ENSRNOG00000012195) ##25	Prss37 (ENSRNOG00000012201) #23	Or9a4 (ENSRNOG00000066955)	Clec5a (ENSRNOG00000026306) #24	Tas2r138 (ENSRNOG00000026225) #25	Mgam (ENSRNOG00000026177) #26	Mgam2 (ENSRNOG00000066165)	Moxd2 (ENSRNOG00000012916) #28	Trbv1 (ENSRNOG00000048468) #29	Prss58 (ENSRNOG00000013132) #30	Prss59 (ENSRNOG00000028989) #31	LOC312273 (ENSRNOG00000013203) ##32	LOC286960 (ENSRNOG00000013245) #32	Prss3b (ENSRNOG00000013382) ##32
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044.w #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##32	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a #32	ENSGT01050000244883.A.a.a.a.b.k.a.a ##32	ENSGT00940000162509.l
Cricetinae	ANCESTRAL SPECIES	23	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.b ##8	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044.w #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163043 #27	ENSGT00530000063085.A.a #28	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##32	ENSGT01050000244883.A.a.a.a.b.k.a.a ##32	ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.a ##32	ENSGT01050000244883.A.a.a.a.a.c.a.a.b.b.b.f ##32
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	160	Fig4 (ENSCGRG00001015893)	Gpr6 (ENSCGRG00001015004)	Wasf1 (ENSCGRG00001013706)	Cdc40 (ENSCGRG00001012490)	Mettl24 (ENSCGRG00001012045)	Ddo (ENSCGRG00001010313)	Slc22a16 (ENSCGRG00001010111)	ENSCGRG00001008723	ENSCGRG00001006339	Cdk19 (ENSCGRG00001013081)	ENSCGRG00001010501	Gtf3c6 (ENSCGRG00001010188)	ENSCGRG00001007331	ENSCGRG00001014458	Slc16a10 (ENSCGRG00001004043)	ENSCGRG00001001576 #22	ENSCGRG00001000675	Mfsd4b5 (ENSCGRG00001023659)	ENSCGRG00001021041	ENSCGRG00001019786	Mfsd4b4 (ENSCGRG00001018700)	Rev3l (ENSCGRG00001006588)	Traf3ip2 (ENSCGRG00001022894)	Fyn (ENSCGRG00001013292)	ENSCGRG00001012299	ENSCGRG00001014335	Ccn6 (ENSCGRG00001011722)	Tube1 (ENSCGRG00001012631)	Fam229b (ENSCGRG00001012149)	Lama4 (ENSCGRG00001023009)	Marcks (ENSCGRG00001020371)
Chinese hamster chok1gshd	MODERN SPECIES	153	Fbn2 (ENSCGRG00001020407)	ENSCGRG00001024319	Slc12a2 (ENSCGRG00001019992)	Ccdc192 (ENSCGRG00001017920)	Ctxn3 (ENSCGRG00001003792)	Prrc1 (ENSCGRG00001021725)	Megf10 (ENSCGRG00001016594)	C330018D20Rik (ENSCGRG00001000564)	Marchf3 (ENSCGRG00001018443)	Lmnb1 (ENSCGRG00001023736)	Tex43 (ENSCGRG00001000467)	Phax (ENSCGRG00001022020)	ENSCGRG00001012154	ENSCGRG00001011295	Gramd3 (ENSCGRG00001014891)	ENSCGRG00001013902 #22	Zfp608 (ENSCGRG00001015219)	Csnk1g3 (ENSCGRG00001024465)	Cep120 (ENSCGRG00001017499)	Prdm6 (ENSCGRG00001016821)	Ppic (ENSCGRG00001008818)	Snx24 (ENSCGRG00001011694)	ENSCGRG00001023240	Sncaip (ENSCGRG00001013058)	Gykl1 (ENSCGRG00001001492)	1700034E13Rik (ENSCGRG00001001918)	Zfp474 (ENSCGRG00001002746)	Lox (ENSCGRG00001014607)	Srfbp1 (ENSCGRG00001000718)	Ftmt (ENSCGRG00001006087)	ENSCGRG00001012009
Chinese hamster chok1gshd	MODERN SPECIES	54	Kdm7a (ENSCGRG00001009052)	Slc37a3 (ENSCGRG00001009575)	Rab19 (ENSCGRG00001003148)	ENSCGRG00001013880	Mkrn1 (ENSCGRG00001016621) ##8	Dennd2a (ENSCGRG00001013315) #10	Adck2 (ENSCGRG00001016753) #11	Ndufb2 (ENSCGRG00001008411) #12	Braf (ENSCGRG00001021906) #14	ENSCGRG00001023061	Mrps33 (ENSCGRG00001000348) #16	ENSCGRG00001012889 #17	Agk (ENSCGRG00001013723) #18	Dennd11 (ENSCGRG00001015156) #19	Wee2 (ENSCGRG00001006258) #21	ENSCGRG00001015635 #22	Tas2r137 (ENSCGRG00001009992) ##25	Tas2r108 (ENSCGRG00001010522) ##25	Prss37 (ENSCGRG00001018297) #23	Crot (ENSCGRG00001023042)	Abcb4 (ENSCGRG00001013813)	Abcb1b (ENSCGRG00001002555)	ABCB1 (ENSCGRG00001014754)	Rundc3b (ENSCGRG00001002136)	Slc25a40 (ENSCGRG00001000177)	Dbf4 (ENSCGRG00001014352)	Adam22 (ENSCGRG00001024130)	Sri (ENSCGRG00001010200)	Steap4 (ENSCGRG00001019212)	Zfp804b (ENSCGRG00001000316)	Tex47 (ENSCGRG00001007269)
Chinese hamster chok1gshd	MODERN SPECIES	111	Cnr1 (ENSCGRG00001010105)	Spaca1 (ENSCGRG00001016168)	Akirin2 (ENSCGRG00001013427)	Orc3 (ENSCGRG00001023069)	Rars2 (ENSCGRG00001021675)	SLC35A1 (ENSCGRG00001019920)	Cfap206 (ENSCGRG00001002156)	ENSCGRG00001014099	Smim8 (ENSCGRG00001012821)	ENSCGRG00001006646	Zfp292 (ENSCGRG00001003267)	Cga (ENSCGRG00001000454)	ENSCGRG00001024026	ENSCGRG00001023523	Mob3b (ENSCGRG00001022528)	ENSCGRG00001021493 #22	ENSCGRG00001006221	C9orf72 (ENSCGRG00001013910)	Lingo2 (ENSCGRG00001009497)	ENSCGRG00001010834	1700009N14Rik (ENSCGRG00001004727)	Aco1 (ENSCGRG00001024337)	Rigi (ENSCGRG00001024123)	Topors (ENSCGRG00001022117)	Ndufb6 (ENSCGRG00001021089)	Tmem215 (ENSCGRG00001009559)	Aptx (ENSCGRG00001000705)	Dnaja1 (ENSCGRG00001009232)	Smu1 (ENSCGRG00001023488)	B4galt1 (ENSCGRG00001014638)	Spink4 (ENSCGRG00001023982)
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	817	ENSMAUG00000003611	Rab19 (ENSMAUG00000001491)	ENSMAUG00000001183 ##8	Dennd2a (ENSMAUG00000000468) #10	Adck2 (ENSMAUG00000000751) #11	Ndufb2 (ENSMAUG00000000340) #12	Braf (ENSMAUG00000016066) #14	Mrps33 (ENSMAUG00000014314) #16	ENSMAUG00000018327	ENSMAUG00000017929 #17	ENSMAUG00000016360	Agk (ENSMAUG00000015011) #18	Dennd11 (ENSMAUG00000014079) #19	ENSMAUG00000013965	Wee2 (ENSMAUG00000013105) #21	ENSMAUG00000016883 #22	Tas2r108 (ENSMAUG00000015894) ##25	Prss37 (ENSMAUG00000014269) #23	Or9a4 (ENSMAUG00000015834)	Clec5a (ENSMAUG00000013571) #24	ENSMAUG00000011057 #26	ENSMAUG00000011729 #27
Golden Hamster	MODERN SPECIES	617	Rnls (ENSMAUG00000006476)	ENSMAUG00000004988	Lipf (ENSMAUG00000006602)	Lipk (ENSMAUG00000008826)	Lipn (ENSMAUG00000009129)	Lipm (ENSMAUG00000006798)	Ankrd22 (ENSMAUG00000005961)	ENSMAUG00000004326	Acta2 (ENSMAUG00000007124)	Fas (ENSMAUG00000008875)	Ch25h (ENSMAUG00000001529)	Lipa (ENSMAUG00000004120)	Ifit2 (ENSMAUG00000004507)	ENSMAUG00000004294	ENSMAUG00000004543	ENSMAUG00000006010 #22	Slc16a12 (ENSMAUG00000005932)	Pank1 (ENSMAUG00000004211)	Kif20b (ENSMAUG00000003707)	Htr7 (ENSMAUG00000008537)	Rpp30 (ENSMAUG00000008797)	Ankrd1 (ENSMAUG00000004256)	Pcgf5 (ENSMAUG00000006268)	Hectd2 (ENSMAUG00000005723)	Ppp1r3c (ENSMAUG00000021890)	Tnks2 (ENSMAUG00000002675)	Fgfbp3 (ENSMAUG00000003881)	Btaf1 (ENSMAUG00000003977)	Cpeb3 (ENSMAUG00000002789)	ENSMAUG00000001811	ENSMAUG00000004621
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044.w #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.b ##32	ENSGT01050000244883.A.a.a.a.b.k.a.b.a.a #32	ENSGT01050000244883.A.a.a.a.b.k.a.a ##32	ENSGT00940000162509.l
Prairie vole	MODERN SPECIES	87	Kdm7a (ENSMOCG00000012739)	Slc37a3 (ENSMOCG00000013977)	ENSMOCG00000018385	Rab19 (ENSMOCG00000000473)	Mkrn1 (ENSMOCG00000006155) ##8	Dennd2a (ENSMOCG00000012296) #10	Adck2 (ENSMOCG00000021171) #11	ENSMOCG00000016120 #12	Braf (ENSMOCG00000023027) #14	ENSMOCG00000016152 #16	ENSMOCG00000020593 #17	ENSMOCG00000000534	Agk (ENSMOCG00000003528) #18	Dennd11 (ENSMOCG00000018809) #19	Wee2 (ENSMOCG00000000778) #21	Ssbp1 (ENSMOCG00000015007) #22	Prss37 (ENSMOCG00000000882) #23	Or9a4 (ENSMOCG00000002678)	Clec5a (ENSMOCG00000016188) #24	ENSMOCG00000013070 #26	Moxd2 (ENSMOCG00000014636) #28	Prss58 (ENSMOCG00000001185) #30	Prss59 (ENSMOCG00000004650) #31	ENSMOCG00000003387 ##32	ENSMOCG00000012091 ##32
Northern American deer mouse	MODERN SPECIES	16	Tbxas1 (ENSPEMG00000012189)	Parp12 (ENSPEMG00000023375)	Kdm7a (ENSPEMG00000007158)	Slc37a3 (ENSPEMG00000023926)	Rab19 (ENSPEMG00000006800)	Mkrn1 (ENSPEMG00000023646) ##8	Dennd2a (ENSPEMG00000021909) #10	Adck2 (ENSPEMG00000021773) #11	ENSPEMG00000023701 #12	Braf (ENSPEMG00000001337) #14	ENSPEMG00000021616 #16	ENSPEMG00000016644 #17	Agk (ENSPEMG00000018886) #18	Dennd11 (ENSPEMG00000009508) #19	Wee2 (ENSPEMG00000012913) #21	Ssbp1 (ENSPEMG00000011838) #22	Tas2r137 (ENSPEMG00000013488) ##25	Tas2r108 (ENSPEMG00000026064) ##25	Prss37 (ENSPEMG00000017152) #23	Or9a4 (ENSPEMG00000009189)	Clec5a (ENSPEMG00000017851) #24	Tas2r138 (ENSPEMG00000001418) #25	ENSPEMG00000008741 #26	Mgam2-ps (ENSPEMG00000028150)	Moxd2 (ENSPEMG00000005786) #28	Prss58 (ENSPEMG00000010113) #30	Prss59 (ENSPEMG00000016197) #31	ENSPEMG00000025308 ##32	ENSPEMG00000027928 #32	ENSPEMG00000028207 #32	ENSPEMG00000008477 ##32
Upper Galilee mountains blind mole rat	MODERN SPECIES	1840	Parp12 (ENSNGAG00000015925)	Kdm7a (ENSNGAG00000010381)	ENSNGAG00000007888 #7	Rab19 (ENSNGAG00000017844)	Mkrn1 (ENSNGAG00000019077) ##8	Dennd2a (ENSNGAG00000016156) #10	Adck2 (ENSNGAG00000010919) #11	Ndufb2 (ENSNGAG00000016898) #12	Braf (ENSNGAG00000014000) #14	ENSNGAG00000011360	Mrps33 (ENSNGAG00000014172) #16	ENSNGAG00000021460 #17	Agk (ENSNGAG00000007692) #18	Dennd11 (ENSNGAG00000011955) #19	ENSNGAG00000019527	Ssbp1 (ENSNGAG00000014269) #22	Tas2r137 (ENSNGAG00000016702) ##25	Tas2r108 (ENSNGAG00000015066) ##25	Prss37 (ENSNGAG00000000102) #23	Or9a7 (ENSNGAG00000017910)	Clec5a (ENSNGAG00000017609) #24	Tas2r138 (ENSNGAG00000015138) #25	ENSNGAG00000010341 #26
Lesser Egyptian jerboa	MODERN SPECIES	81	Fmc1 (ENSJJAG00000017491)	Luc7l2 (ENSJJAG00000011456)	Hipk2 (ENSJJAG00000019253)	Tbxas1 (ENSJJAG00000020954)	Parp12 (ENSJJAG00000019161)	Slc37a3 (ENSJJAG00000019794)	Rab19 (ENSJJAG00000015955)	ENSJJAG00000010761 #8	Dennd2a (ENSJJAG00000017109) #10	ENSJJAG00000000905 #11	Braf (ENSJJAG00000020559) #14	ENSJJAG00000016723 #16	ENSJJAG00000014217 #17	Wee2 (ENSJJAG00000022003) #21	ENSJJAG00000001577	Ssbp1 (ENSJJAG00000016282) #22	Clec5a (ENSJJAG00000017338) #24	ENSJJAG00000013568	ENSJJAG00000017582 #27	Moxd2 (ENSJJAG00000011768) #28	Prss59 (ENSJJAG00000020845) #31	ENSJJAG00000013742 ##32	ENSJJAG00000007203 ##32	Ephb6 (ENSJJAG00000015598)	Trpv6 (ENSJJAG00000010273) #37	Trpv5 (ENSJJAG00000020226)	Tas2r144 (ENSJJAG00000017432) ##25	ENSJJAG00000012066	Tmem139 (ENSJJAG00000014062)	Casp2 (ENSJJAG00000008256)	Zyx (ENSJJAG00000016066)
Kangaroo rat	MODERN SPECIES	375	Parp12 (ENSDORG00000009525)	Kdm7a (ENSDORG00000012871)	Slc37a3 (ENSDORG00000013791)	Rab19 (ENSDORG00000006983)	Mkrn1 (ENSDORG00000003480) #8	Dennd2a (ENSDORG00000016236) #10	Adck2 (ENSDORG00000030048) #11	ENSDORG00000009731	Braf (ENSDORG00000009732) #14	ENSDORG00000024624	Mrps33 (ENSDORG00000007444) #16	ENSDORG00000026381 #17	Agk (ENSDORG00000003733) #18	Dennd11 (ENSDORG00000003736) #19	Wee2 (ENSDORG00000015156) #21	Ssbp1 (ENSDORG00000015161) #22	Prss37 (ENSDORG00000015166) #23	Clec5a (ENSDORG00000000839) #24	ENSDORG00000007415 #26	ENSDORG00000007422 #27	Moxd2 (ENSDORG00000007423) #28	Prss58 (ENSDORG00000007425) #30	Prss59 (ENSDORG00000027379) #31	ENSDORG00000007428 ##32	ENSDORG00000026650 #33	ENSDORG00000025187 ##32	ENSDORG00000024335 ##32	ENSDORG00000025731 ##32	ENSDORG00000023156 ##32	ENSDORG00000025009 ##32	ENSDORG00000008690 ##32
Lagomorpha	ANCESTRAL SPECIES	107													ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00940000163043 #27	ENSGT00530000063085.A.a #28	ENSGT00940000153130.b #29	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.b.x #36	ENSGT00940000154460.a	ENSGT00940000164097
Rabbit	DUPLICATION
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	1401	APLN (ENSOCUG00000022649)	OCRL (ENSOCUG00000016167)	SMARCA1 (ENSOCUG00000001047)	ENSOCUG00000025977	ENSOCUG00000030104	ENSOCUG00000034526	ENSOCUG00000002602	ENSOCUG00000029410	PRR32 (ENSOCUG00000015056)	ENSOCUG00000000908	ENSOCUG00000010499	ENSOCUG00000006392	ENSOCUG00000023025	TENM1 (ENSOCUG00000005013)	SH2D1A (ENSOCUG00000005012)	ENSOCUG00000022591 #22	STAG2 (ENSOCUG00000009879)	ENSOCUG00000009878	THOC2 (ENSOCUG00000005996)	GRIA3 (ENSOCUG00000000315)	ENSOCUG00000021549	ENSOCUG00000027726	C1GALT1C1 (ENSOCUG00000004781)	ENSOCUG00000014315	CUL4B (ENSOCUG00000015633)	ENSOCUG00000027764	LAMP2 (ENSOCUG00000024954)	ATP1B4 (ENSOCUG00000003951)	TMEM255A (ENSOCUG00000004334)	ZBTB33 (ENSOCUG00000004331)	ENSOCUG00000029262
Rabbit	MODERN SPECIES	18	MDFIC (ENSOCUG00000012455)	TFEC (ENSOCUG00000006292)	TES (ENSOCUG00000008491)	CAV2 (ENSOCUG00000014515)	CAV1 (ENSOCUG00000014520)	MET (ENSOCUG00000013060)	ST7 (ENSOCUG00000016156)	WNT2 (ENSOCUG00000016173)	ASZ1 (ENSOCUG00000015962)	CFTR (ENSOCUG00000010733)	ENSOCUG00000038182	CTTNBP2 (ENSOCUG00000001386)	LSM8 (ENSOCUG00000017359)	ENSOCUG00000021922	ENSOCUG00000032257	ENSOCUG00000023965 #22	ENSOCUG00000037642	KCND2 (ENSOCUG00000004149)	TSPAN12 (ENSOCUG00000001875)	ENSOCUG00000034467	ING3 (ENSOCUG00000001881)	CPED1 (ENSOCUG00000005778)	WNT16 (ENSOCUG00000014744)	FAM3C (ENSOCUG00000003351)	PTPRZ1 (ENSOCUG00000013209)	AASS (ENSOCUG00000013237)	FEZF1 (ENSOCUG00000021285)	ENSOCUG00000039223	ENSOCUG00000033009	CADPS2 (ENSOCUG00000007425)	TAS2R16 (ENSOCUG00000017889) ##25
Rabbit	MODERN SPECIES	491													ENSOCUG00000022873 #17	DENND11 (ENSOCUG00000017559) #19	WEE2 (ENSOCUG00000026396) #21	ENSOCUG00000003799 #22	TAS2R3 (ENSOCUG00000003800) ##25	TAS2R4 (ENSOCUG00000003805) ##25	PRSS37 (ENSOCUG00000006129) #23	ENSOCUG00000022171 #31	ENSOCUG00000037719	CLEC5A (ENSOCUG00000009582) #24	ENSOCUG00000031008 #25	MGAM (ENSOCUG00000008177) #26	ENSOCUG00000000872	ENSOCUG00000000387 #28	ENSOCUG00000025914 #29	PRSS58 (ENSOCUG00000000389) #30	ENSOCUG00000000393 #31	ENSOCUG00000025211 #36	ENSOCUG00000026000 #36
Pika	MODERN SPECIES	1889													AGK (ENSOPRG00000012230) #18	DENND11 (ENSOPRG00000012249) #19	WEE2 (ENSOPRG00000009103) #21	SSBP1 (ENSOPRG00000003195) #22	TAS2R4 (ENSOPRG00000009115) ##25	PRSS37 (ENSOPRG00000009119) #23
Primates	ANCESTRAL SPECIES	12	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00940000163043 #27	ENSGT00530000063085.A.a #28	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.l #33
Strepsirrhini	ANCESTRAL SPECIES	9	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.b #8	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00940000163043 #27	ENSGT00530000063085.A.a #28	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.l #33	ENSGT00940000162509
Lemuriformes	ANCESTRAL SPECIES	4	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.b.ib #8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401.m #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.l #33	ENSGT00940000162509	ENSGT00940000154270.a.b
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	2	KDM7A (ENSMICG00000003175)	SLC37A3 (ENSMICG00000015980) #7	RAB19 (ENSMICG00000006614)	MKRN1 (ENSMICG00000002114) #8	DENND2A (ENSMICG00000002120) #10	ADCK2 (ENSMICG00000005086) #11	ENSMICG00000005092 #12	BRAF (ENSMICG00000005096) #14	MRPS33 (ENSMICG00000029049) #16	ENSMICG00000028298	ENSMICG00000036507	TMEM178B (ENSMICG00000027101) #17	ENSMICG00000002561 #18	DENND11 (ENSMICG00000002570) #19	WEE2 (ENSMICG00000045942) #21	ENSMICG00000031317 #22	TAS2R5 (ENSMICG00000002588) ##25	PRSS37 (ENSMICG00000043681) #23	OR9A1P (ENSMICG00000047958)	CLEC5A (ENSMICG00000001118) #24	ENSMICG00000027436	MGAM (ENSMICG00000001123) #26	ENSMICG00000027181	ENSMICG00000001140 #28	PRSS58 (ENSMICG00000043863) #30	ENSMICG00000028481 #33	ENSMICG00000026754	TRBV15 (ENSMICG00000030792)	ENSMICG00000007358 ##32	ENSMICG00000047513	ENSMICG00000027701
Mouse lemur	MODERN SPECIES	27	TP53I11 (ENSMICG00000033784)	TSPAN18 (ENSMICG00000006504)	CD82 (ENSMICG00000010264)	ALX4 (ENSMICG00000048133)	EXT2 (ENSMICG00000014680)	ENSMICG00000028094	ACCS (ENSMICG00000007981)	ACCSL (ENSMICG00000014661)	ENSMICG00000034539	C11orf96 (ENSMICG00000041610)	ALKBH3 (ENSMICG00000014651)	HSD17B12 (ENSMICG00000014632)	TTC17 (ENSMICG00000014602)	ENSMICG00000014581	LRRC4C (ENSMICG00000047157)	ENSMICG00000043108 #22	IFTAP (ENSMICG00000008620)	TRAF6 (ENSMICG00000008604)	PRR5L (ENSMICG00000047184)	COMMD9 (ENSMICG00000008594)	LDLRAD3 (ENSMICG00000008590)	TRIM44 (ENSMICG00000008587)	FJX1 (ENSMICG00000033879)	PAMR1 (ENSMICG00000003733)	SLC1A2 (ENSMICG00000003719)	CD44 (ENSMICG00000003713)	ENSMICG00000036406	PDHX (ENSMICG00000003700)	APIP (ENSMICG00000003696)	EHF (ENSMICG00000003694)	ENSMICG00000038699
Lemuriformes_a	ANCESTRAL SPECIES	51	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.b.ib #8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401.m #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.l #33	ENSGT00940000162509	ENSGT00940000154270.a.b	ENSGT00940000154270.a.a
Greater bamboo lemur	MODERN SPECIES	70	SLC37A3 (ENSPSMG00000006206) #7	RAB19 (ENSPSMG00000006175)	ENSPSMG00000006161 #8	ENSPSMG00000006137	DENND2A (ENSPSMG00000006080) #10	ADCK2 (ENSPSMG00000006015) #11	ENSPSMG00000006007	NDUFB2 (ENSPSMG00000005977) #12	BRAF (ENSPSMG00000005759) #14	ENSPSMG00000005632 #16	ENSPSMG00000005629	TMEM178B (ENSPSMG00000005625) #17	AGK (ENSPSMG00000005473) #18	DENND11 (ENSPSMG00000005424) #19	WEE2 (ENSPSMG00000005416) #21	SSBP1 (ENSPSMG00000005385) #22	TAS2R3 (ENSPSMG00000005351) ##25	TAS2R4 (ENSPSMG00000005349) ##25	PRSS37 (ENSPSMG00000005348) #23	OR9A1P (ENSPSMG00000005343)	OR9A4 (ENSPSMG00000005339)	CLEC5A (ENSPSMG00000005337) #24	TAS2R38 (ENSPSMG00000005320) #25	ENSPSMG00000005316	MGAM (ENSPSMG00000005298) #26	PRSS58 (ENSPSMG00000005244) #30	ENSPSMG00000005238 #31	ENSPSMG00000005226 #33	ENSPSMG00000005215	ENSPSMG00000005211	TRBV9 (ENSPSMG00000005204)
Coquerels sifaka	MODERN SPECIES	430	ENSPCOG00000016270	SLC37A3 (ENSPCOG00000014061) #7	RAB19 (ENSPCOG00000019113)	ENSPCOG00000002890 #8	ENSPCOG00000023686	DENND2A (ENSPCOG00000012423) #10	ADCK2 (ENSPCOG00000019938) #11	ENSPCOG00000018417	NDUFB2 (ENSPCOG00000008454) #12	BRAF (ENSPCOG00000024467) #14	ENSPCOG00000015683 #16	TMEM178B (ENSPCOG00000020472) #17	AGK (ENSPCOG00000025807) #18	DENND11 (ENSPCOG00000005094) #19	WEE2 (ENSPCOG00000016620) #21	SSBP1 (ENSPCOG00000021009) #22	PRSS37 (ENSPCOG00000020043) #23	ENSPCOG00000027867 #24	MGAM (ENSPCOG00000014465) #26
Bushbaby	MODERN SPECIES	164	TBXAS1 (ENSOGAG00000008899)	PARP12 (ENSOGAG00000008906)	KDM7A (ENSOGAG00000007678)	SLC37A3 (ENSOGAG00000029064) #7	RAB19 (ENSOGAG00000009876)	MKRN1 (ENSOGAG00000009877) ##8	DENND2A (ENSOGAG00000031447) #10	ADCK2 (ENSOGAG00000009639) #11	NDUFB2 (ENSOGAG00000009644) #12	BRAF (ENSOGAG00000009646) #14	MRPS33 (ENSOGAG00000017200) #16	ENSOGAG00000027045 #17	AGK (ENSOGAG00000016647) #18	DENND11 (ENSOGAG00000016654) #19	ENSOGAG00000032705 #21	SSBP1 (ENSOGAG00000016661) #22	TAS2R3 (ENSOGAG00000034844) ##25	PRSS37 (ENSOGAG00000016666) #23	OR9A1P (ENSOGAG00000025142)	OR9A4 (ENSOGAG00000029429)	CLEC5A (ENSOGAG00000011563) #24	TAS2R38 (ENSOGAG00000011567) #25	MGAM (ENSOGAG00000026892) #26	ENSOGAG00000032017	ENSOGAG00000011568 #27	ENSOGAG00000011575 #28	PRSS58 (ENSOGAG00000011579) #30	ENSOGAG00000029218 #31	ENSOGAG00000029366 #33	ENSOGAG00000027692	ENSOGAG00000024305
Haplorrhini	ANCESTRAL SPECIES	8	ENSGT00940000157903	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.l #33	ENSGT00940000154460.a
Simiiformes	ANCESTRAL SPECIES	12	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00910000146873	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT00940000162509.f	ENSGT01050000244883.A.a.a.a.b.l #33
Catarrhini	ANCESTRAL SPECIES	6	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154.a #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961.c.a #18	ENSGT00910000146873	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT00940000162509.f	ENSGT00940000164097
Cercopithecidae	ANCESTRAL SPECIES	11	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154.a #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961.c.a #18	ENSGT00910000146873	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT00940000162509.f	ENSGT00940000154460.a.r.a	ENSGT00940000164097
Rhinopithecus	ANCESTRAL SPECIES	141					ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154.a #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961.c.a.c #18	ENSGT00910000146873	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01050000244883.A.a.a.a.b.l #33	ENSGT00940000154460.a.r.a	ENSGT00940000164097	ENSGT00940000154460.b.e.a.b	ENSGT00940000154270.a.a	ENSGT00940000154542.b.b.k #34	ENSGT00940000154270.a.b.e.a.a.a.a.a
Black snub-nosed monkey	MODERN SPECIES	1030				MKRN1 (ENSRBIG00000027680) ##8	DENND2A (ENSRBIG00000033715) #10	ADCK2 (ENSRBIG00000034656) #11	NDUFB2 (ENSRBIG00000019926) #12	BRAF (ENSRBIG00000034807) #14	ENSRBIG00000029491	MRPS33 (ENSRBIG00000009406) #16	TMEM178B (ENSRBIG00000021689) #17	AGK (ENSRBIG00000032192) #18	ENSRBIG00000000681	DENND11 (ENSRBIG00000000540) #19	WEE2 (ENSRBIG00000031199) #21	SSBP1 (ENSRBIG00000028396) #22	TAS2R5 (ENSRBIG00000006452) ##25	PRSS37 (ENSRBIG00000038319) #23	OR9A4 (ENSRBIG00000031832)	CLEC5A (ENSRBIG00000018399) #24	MGAM (ENSRBIG00000027925) #26	MGAM2 (ENSRBIG00000029407)	ENSRBIG00000032600 #28	PRSS58 (ENSRBIG00000040803) #30	ENSRBIG00000041017 #33	TRBV2 (ENSRBIG00000031390)	TRBV3-1 (ENSRBIG00000041947)	TRBV7-3 (ENSRBIG00000019786)	TRBV9 (ENSRBIG00000010651)	TRBV10-1 (ENSRBIG00000007349) #34	TRBV7-4 (ENSRBIG00000037535)
Golden snub-nosed monkey	MODERN SPECIES	843				MKRN1 (ENSRROG00000037557) ##8	DENND2A (ENSRROG00000034382) #10	ADCK2 (ENSRROG00000044522) #11	NDUFB2 (ENSRROG00000029902) #12	BRAF (ENSRROG00000010145) #14	ENSRROG00000012111	MRPS33 (ENSRROG00000036028) #16	TMEM178B (ENSRROG00000039953) #17	ENSRROG00000033402 #18	ENSRROG00000021882	DENND11 (ENSRROG00000031612) #19	WEE2 (ENSRROG00000013594) #21	SSBP1 (ENSRROG00000029359) #22	TAS2R5 (ENSRROG00000019559) ##25	PRSS37 (ENSRROG00000039139) #23	OR9A4 (ENSRROG00000010627)	CLEC5A (ENSRROG00000039465) #24	ENSRROG00000038256 #26
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154.a #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961.c.a #18	ENSGT00910000146873	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT00530000063085.A.a #28	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT00940000162509.f	ENSGT00940000154460.a.r.a.b	ENSGT00940000164097
Vervet Monkey	MODERN SPECIES	13	KDM7A (ENSCSAG00000008271)	ENSCSAG00000019149	SLC37A3 (ENSCSAG00000008259) #7	RAB19 (ENSCSAG00000008251)	MKRN1 (ENSCSAG00000008246) ##8	DENND2A (ENSCSAG00000008235) #10	ADCK2 (ENSCSAG00000008230) #11	NDUFB2 (ENSCSAG00000008224) #12	BRAF (ENSCSAG00000008218) #14	MRPS33 (ENSCSAG00000008211) #16	ENSCSAG00000008209 #17	ENSCSAG00000008203 #17	AGK (ENSCSAG00000008178) #18	DENND11 (ENSCSAG00000008128) #19	WEE2 (ENSCSAG00000008117) #21	SSBP1 (ENSCSAG00000008102) #22	TAS2R3 (ENSCSAG00000019150) ##25	TAS2R4 (ENSCSAG00000019151) ##25	TAS2R5 (ENSCSAG00000019152) ##25	PRSS37 (ENSCSAG00000008093) #23	CLEC5A (ENSCSAG00000008078) #24	TAS2R38 (ENSCSAG00000019153) #25	MGAM (ENSCSAG00000008027) #26	ENSCSAG00000007937	ENSCSAG00000007921 #28	PRSS58 (ENSCSAG00000007906) #30	ENSCSAG00000007896 #33	ENSCSAG00000019154	ENSCSAG00000007880	TRBV3-1 (ENSCSAG00000007874)	ENSCSAG00000007869
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154.a #14	ENSGT00390000011401.k.a #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961.c.a #18	ENSGT00910000146873	ENSGT00910000147594	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT00940000162509.f	ENSGT00940000154460.a.r.a.b.b	ENSGT00940000164097	ENSGT00940000162509.e.a.e
Cercopithecinae_b	ANCESTRAL SPECIES	11	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154.a #14	ENSGT00390000011401.k.b #16	ENSGT00390000011401.k.a #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961.c.a #18	ENSGT00910000146873	ENSGT00910000147594	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT00940000154460.a.r.a.b.a	ENSGT00940000154460.a.r.b	ENSGT00940000154542.b.a.k.b.b ##34	ENSGT00940000154460.b.e.a.b
Olive baboon	MODERN SPECIES	14	PARP12 (ENSPANG00000022225)	KDM7A (ENSPANG00000011491)	SLC37A3 (ENSPANG00000007700) #7	RAB19 (ENSPANG00000032483)	MKRN1 (ENSPANG00000017280) ##8	DENND2A (ENSPANG00000018260) #10	ADCK2 (ENSPANG00000007837) #11	NDUFB2 (ENSPANG00000022006) #12	BRAF (ENSPANG00000004965) #14	MRPS33 (ENSPANG00000048937) #16	TMEM178B (ENSPANG00000029596) #17	ENSPANG00000051109	AGK (ENSPANG00000001222) #18	DENND11 (ENSPANG00000001223) #19	WEE2 (ENSPANG00000008933) #21	SSBP1 (ENSPANG00000009820) #22	TAS2R3 (ENSPANG00000037537) ##25	TAS2R4 (ENSPANG00000037718) ##25	TAS2R5 (ENSPANG00000047103) ##25	PRSS37 (ENSPANG00000016705) #23	OR9A1P (ENSPANG00000048516)	CLEC5A (ENSPANG00000016706) #24	TAS2R38 (ENSPANG00000010961) #25	ENSPANG00000038896	PRSS58 (ENSPANG00000016708) #30	ENSPANG00000048652 #31	TRBV5-1 (ENSPANG00000042759)	TRBV7-2 (ENSPANG00000044070)	TRBV7-3 (ENSPANG00000039849)	TRBV9 (ENSPANG00000034082)	TRBV10-1 (ENSPANG00000048649) #34
Cercopithecinae_d	ANCESTRAL SPECIES	25	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154.a #14	ENSGT00390000011401.k.a #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961.c.a #18	ENSGT00910000146873	ENSGT00910000147594	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b #30	ENSGT00940000162509.f	ENSGT00940000154460.a.r.a.b.b	ENSGT00940000154460.a.r.a.a	ENSGT00940000154460.a.r.a.b.a	ENSGT00940000154460.a.r.b	ENSGT00940000154542.b.a.k.b.b ##34	ENSGT00940000154460.b.e.a.b	ENSGT00940000154270.a.a
Drill	MODERN SPECIES	1178	KDM7A (ENSMLEG00000039850)	SLC37A3 (ENSMLEG00000034527) #7	RAB19 (ENSMLEG00000032277)	MKRN1 (ENSMLEG00000033107) ##8	DENND2A (ENSMLEG00000040269) #10	ADCK2 (ENSMLEG00000038169) #11	NDUFB2 (ENSMLEG00000034682) #12	BRAF (ENSMLEG00000041508) #14	ENSMLEG00000043989 #16	TMEM178B (ENSMLEG00000030888) #17	AGK (ENSMLEG00000043143) #18	ENSMLEG00000011841	ENSMLEG00000029548	DENND11 (ENSMLEG00000035429) #19	WEE2 (ENSMLEG00000023635) #21	SSBP1 (ENSMLEG00000039541) #22	PRSS37 (ENSMLEG00000039528) #23	CLEC5A (ENSMLEG00000014115) #24	TAS2R38 (ENSMLEG00000011241) #25	MGAM (ENSMLEG00000028247) #26
Sooty mangabey	MODERN SPECIES	148	PARP12 (ENSCATG00000029372)	KDM7A (ENSCATG00000031213)	SLC37A3 (ENSCATG00000039038) #7	RAB19 (ENSCATG00000029739)	MKRN1 (ENSCATG00000039778) ##8	DENND2A (ENSCATG00000035508) #10	ADCK2 (ENSCATG00000029766) #11	NDUFB2 (ENSCATG00000022754) #12	BRAF (ENSCATG00000034341) #14	MRPS33 (ENSCATG00000026661) #16	TMEM178B (ENSCATG00000044426) #17	AGK (ENSCATG00000043619) #18	ENSCATG00000000122	DENND11 (ENSCATG00000036082) #19	WEE2 (ENSCATG00000007238) #21	SSBP1 (ENSCATG00000035429) #22	PRSS37 (ENSCATG00000040618) #23	OR9A1P (ENSCATG00000018573)	CLEC5A (ENSCATG00000040577) #24	TAS2R38 (ENSCATG00000018198) #25	MGAM (ENSCATG00000040266) #26	MGAM2 (ENSCATG00000032547)	PRSS58 (ENSCATG00000018483) #30	ENSCATG00000019590	ENSCATG00000018350	ENSCATG00000018560
Macaca	ANCESTRAL SPECIES	3	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154.a #14	ENSGT00390000011401.k.a #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961.c.a #18	ENSGT00910000146873	ENSGT00910000147594	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT00940000162509.f	ENSGT00940000154460.a.r.a.b.b	ENSGT00940000162509.e.a.e	ENSGT00940000154460.a.r.a.a
Pig-tailed macaque	MODERN SPECIES	479	KDM7A (ENSMNEG00000028468)	SLC37A3 (ENSMNEG00000044880) #7	RAB19 (ENSMNEG00000043765)	MKRN1 (ENSMNEG00000040268) ##8	DENND2A (ENSMNEG00000036269) #10	ADCK2 (ENSMNEG00000031935) #11	NDUFB2 (ENSMNEG00000044806) #12	BRAF (ENSMNEG00000024672) #14	MRPS33 (ENSMNEG00000044224) #16	TMEM178B (ENSMNEG00000028782) #17	AGK (ENSMNEG00000029923) #18	ENSMNEG00000003382	ENSMNEG00000001410	DENND11 (ENSMNEG00000034919) #19	WEE2 (ENSMNEG00000032770) #21	SSBP1 (ENSMNEG00000034892) #22	PRSS37 (ENSMNEG00000045224) #23	CLEC5A (ENSMNEG00000039445) #24	TAS2R38 (ENSMNEG00000003977) #25	MGAM (ENSMNEG00000032400) #26	MGAM2 (ENSMNEG00000040988)	PRSS58 (ENSMNEG00000036745) #30	ENSMNEG00000030226 #31	ENSMNEG00000008461	ENSMNEG00000013561	TRBV7-3 (ENSMNEG00000044967)	TRBV9 (ENSMNEG00000017269)	TRBV10-1 (ENSMNEG00000010145) #34	ENSMNEG00000037773 ##34	ENSMNEG00000008940	ENSMNEG00000044591
Macaca_a	ANCESTRAL SPECIES	7	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154.a #14	ENSGT00390000011401.k.b #16	ENSGT00390000011401.k.a #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961.c.a #18	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT00940000162509.f	ENSGT00940000154460.a.r.a.b.b	ENSGT00940000162509.e.a.e	ENSGT00940000154460.a.r.a.a
Rhesus	MODERN SPECIES	13	PARP12 (ENSMMUG00000004224)	KDM7A (ENSMMUG00000008126)	ENSMMUG00000053674	SLC37A3 (ENSMMUG00000015870) #7	RAB19 (ENSMMUG00000010419)	MKRN1 (ENSMMUG00000010420) ##8	DENND2A (ENSMMUG00000042299) #10	ADCK2 (ENSMMUG00000015282) #11	NDUFB2 (ENSMMUG00000015284) #12	BRAF (ENSMMUG00000042793) #14	MRPS33 (ENSMMUG00000050535) #16	TMEM178B (ENSMMUG00000041051) #17	AGK (ENSMMUG00000021017) #18	DENND11 (ENSMMUG00000039865) #19	WEE2 (ENSMMUG00000044167) #21	SSBP1 (ENSMMUG00000022442) #22	TAS2R3 (ENSMMUG00000059165) ##25	TAS2R4 (ENSMMUG00000022439) ##25	TAS2R5 (ENSMMUG00000056110) ##25	PRSS37 (ENSMMUG00000053855) #23	OR9A4 (ENSMMUG00000042443)	CLEC5A (ENSMMUG00000016271) #24	TAS2R38 (ENSMMUG00000055710) #25	MGAM (ENSMMUG00000016273) #26	MGAM2 (ENSMMUG00000019937)	PRSS58 (ENSMMUG00000005931) #30	ENSMMUG00000039273 #31	ENSMMUG00000060990	ENSMMUG00000061142	ENSMMUG00000020332	ENSMMUG00000060238
Crab-eating macaque	MODERN SPECIES	13	ENSMFAG00000055772	SLC37A3 (ENSMFAG00000038757) #7	RAB19 (ENSMFAG00000003529)	MKRN1 (ENSMFAG00000000737) ##8	DENND2A (ENSMFAG00000043828) #10	ENSMFAG00000048196	ADCK2 (ENSMFAG00000007386) #11	NDUFB2 (ENSMFAG00000048116) #12	BRAF (ENSMFAG00000001069) #14	ENSMFAG00000057380	MRPS33 (ENSMFAG00000032116) #16	TMEM178B (ENSMFAG00000043984) #17	AGK (ENSMFAG00000039906) #18	DENND11 (ENSMFAG00000002632) #19	WEE2 (ENSMFAG00000038833) #21	SSBP1 (ENSMFAG00000032819) #22	TAS2R3 (ENSMFAG00000063716) ##25	TAS2R4 (ENSMFAG00000061404) ##25	TAS2R5 (ENSMFAG00000057048) ##25	PRSS37 (ENSMFAG00000033856) #23	OR9A4 (ENSMFAG00000042777)	CLEC5A (ENSMFAG00000036311) #24	TAS2R38 (ENSMFAG00000059261) #25	MGAM (ENSMFAG00000000048) #26	MGAM2 (ENSMFAG00000040766)	PRSS58 (ENSMFAG00000040057) #30	ENSMFAG00000039259 #31	ENSMFAG00000065633	ENSMFAG00000059294	ENSMFAG00000048982	ENSMFAG00000055769
Hominoidea	ANCESTRAL SPECIES	6	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154.a #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961.c.a #18	ENSGT00910000146873	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT00940000164097.f.b	ENSGT00940000162509.e.a	ENSGT00940000154270.a.b.e.b
Gibbon	MODERN SPECIES	3	PARP12 (ENSNLEG00000001802)	KDM7A (ENSNLEG00000001833)	SLC37A3 (ENSNLEG00000001879) #7	RAB19 (ENSNLEG00000030911)	MKRN1 (ENSNLEG00000001921) ##8	DENND2A (ENSNLEG00000002026) #10	ADCK2 (ENSNLEG00000002068) #11	NDUFB2 (ENSNLEG00000035760) #12	BRAF (ENSNLEG00000002139) #14	MRPS33 (ENSNLEG00000002278) #16	TMEM178B (ENSNLEG00000029749) #17	AGK (ENSNLEG00000002291) #18	ENSNLEG00000027915	DENND11 (ENSNLEG00000030404) #19	WEE2 (ENSNLEG00000002356) #21	SSBP1 (ENSNLEG00000002361) #22	TAS2R3 (ENSNLEG00000018419) ##25	PRSS37 (ENSNLEG00000002371) #23	OR9A4 (ENSNLEG00000002393)	CLEC5A (ENSNLEG00000002394) #24	TAS2R38 (ENSNLEG00000018421) #25	MGAM (ENSNLEG00000002429) #26	MGAM2 (ENSNLEG00000002615)	PRSS58 (ENSNLEG00000002623) #30	ENSNLEG00000028355 #33	ENSNLEG00000035493	ENSNLEG00000035397	ENSNLEG00000032489	ENSNLEG00000031773	ENSNLEG00000034334	ENSNLEG00000034777
Hominidae	ANCESTRAL SPECIES	11	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154.a #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961.c.a #18	ENSGT00910000146873	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT00940000164097.f.b	ENSGT01050000244883.A.a.a.a.b.l #33	ENSGT00940000154460.a
Orangutan	MODERN SPECIES	20	TBXAS1 (ENSPPYG00000018052)	PARP12 (ENSPPYG00000018053)	KDM7A (ENSPPYG00000018054)	SLC37A3 (ENSPPYG00000018055) #7	RAB19 (ENSPPYG00000018056)	MKRN1 (ENSPPYG00000018057) ##8	DENND2A (ENSPPYG00000018058) #10	ADCK2 (ENSPPYG00000018059) #11	NDUFB2 (ENSPPYG00000018060) #12	BRAF (ENSPPYG00000018061) #14	MRPS33 (ENSPPYG00000036255) #16	TMEM178B (ENSPPYG00000029744) #17	AGK (ENSPPYG00000018064) #18	DENND11 (ENSPPYG00000033394) #19	WEE2 (ENSPPYG00000018066) #21	SSBP1 (ENSPPYG00000018068) #22	TAS2R3 (ENSPPYG00000018069) ##25	TAS2R4 (ENSPPYG00000035803) ##25	TAS2R5 (ENSPPYG00000018267) ##25	PRSS37 (ENSPPYG00000018071) #23	CLEC5A (ENSPPYG00000018072) #24	ENSPPYG00000018074 #26	MGAM2 (ENSPPYG00000018075)	PRSS58 (ENSPPYG00000018076) #30	ENSPPYG00000040295 #31	ENSPPYG00000030426	ENSPPYG00000038450	ENSPPYG00000030363	ENSPPYG00000037063	ENSPPYG00000037561	ENSPPYG00000038711
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	15	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154.a #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961.c.a #18	ENSGT00910000146873	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01050000244883.A.a.a.a.b.l #33	ENSGT00940000154460.a	ENSGT00940000164097.f.a	ENSGT00940000162509.e.a
Gorilla	MODERN SPECIES	20	PARP12 (ENSGGOG00000000828)	KDM7A (ENSGGOG00000003842)	SLC37A3 (ENSGGOG00000011497) #7	RAB19 (ENSGGOG00000000615)	ENSGGOG00000023977 ##8	DENND2A (ENSGGOG00000011405) #10	ADCK2 (ENSGGOG00000012327) #11	ENSGGOG00000024622	BRAF (ENSGGOG00000017089) #14	MRPS33 (ENSGGOG00000009563) #16	TMEM178B (ENSGGOG00000025163) #17	AGK (ENSGGOG00000008821) #18	ENSGGOG00000037770	DENND11 (ENSGGOG00000008828) #19	WEE2 (ENSGGOG00000009609) #21	SSBP1 (ENSGGOG00000009615) #22	TAS2R3 (ENSGGOG00000009618) ##25	TAS2R4 (ENSGGOG00000023731) ##25	TAS2R5 (ENSGGOG00000009622) ##25	PRSS37 (ENSGGOG00000010592) #23	OR9A4 (ENSGGOG00000006400)	CLEC5A (ENSGGOG00000006401) #24	TAS2R38 (ENSGGOG00000000269) #25	MGAM (ENSGGOG00000003832) #26	MGAM2 (ENSGGOG00000010479)	PRSS58 (ENSGGOG00000008370) #30	ENSGGOG00000038309 #33	ENSGGOG00000042183	ENSGGOG00000043553	TRBV4-2 (ENSGGOG00000026368)	TRBV7-3 (ENSGGOG00000006487)
Homo/Pan group	ANCESTRAL SPECIES	15	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154.a #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961.c.a #18	ENSGT00910000146873	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b #30	ENSGT00940000154460.a	ENSGT00940000164097.f.a	ENSGT00940000162509.e.a	ENSGT00940000154270.a.b.e.b
Human	MODERN SPECIES	19	TBXAS1 (ENSG00000059377)	PARP12 (ENSG00000059378)	KDM7A (ENSG00000006459)	SLC37A3 (ENSG00000157800) #7	RAB19 (ENSG00000146955)	MKRN1 (ENSG00000133606) ##8	DENND2A (ENSG00000146966) #10	ADCK2 (ENSG00000133597) #11	NDUFB2 (ENSG00000090266) #12	BRAF (ENSG00000157764) #14	MRPS33 (ENSG00000090263) #16	TMEM178B (ENSG00000261115) #17	AGK (ENSG00000006530) #18	DENND11 (ENSG00000257093) #19	WEE2 (ENSG00000214102) #21	SSBP1 (ENSG00000106028) #22	TAS2R3 (ENSG00000127362) ##25	TAS2R4 (ENSG00000127364) ##25	TAS2R5 (ENSG00000127366) ##25	PRSS37 (ENSG00000165076) #23	OR9A1P (ENSG00000237621)	MGAM (ENSG00000257335) #26	OR9A4 (ENSG00000258083)	CLEC5A (ENSG00000258227) #24	TAS2R38 (ENSG00000257138) #25	MGAM2 (ENSG00000257743)	PRSS58 (ENSG00000258223) #30	TRBV2 (ENSG00000226660)	TRBV3-1 (ENSG00000237702)	TRBV4-1 (ENSG00000211710)	TRBV5-1 (ENSG00000211734)
Pan	ANCESTRAL SPECIES	13	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154.a #14	ENSGT00390000011401 #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961.c.a #18	ENSGT00910000146873	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796 #22	ENSGT01100000263477.A.b.b ##25	ENSGT01100000263477.C ##25	ENSGT01100000263477.A.a.b ##25	ENSGT00940000161483 #23	ENSGT00940000164718	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b #30	ENSGT00940000154460.a	ENSGT00940000164097.f.a	ENSGT00940000162509.e.b.a	ENSGT00940000162509.e.b.b
Bonobo	MODERN SPECIES	20	PARP12 (ENSPPAG00000029869)	KDM7A (ENSPPAG00000036374)	SLC37A3 (ENSPPAG00000033097) #7	RAB19 (ENSPPAG00000032853)	MKRN1 (ENSPPAG00000040448) ##8	DENND2A (ENSPPAG00000026508) #10	ADCK2 (ENSPPAG00000034476) #11	NDUFB2 (ENSPPAG00000039747) #12	BRAF (ENSPPAG00000036004) #14	MRPS33 (ENSPPAG00000043201) #16	TMEM178B (ENSPPAG00000002445) #17	AGK (ENSPPAG00000041636) #18	ENSPPAG00000029884	ENSPPAG00000043213 #19	WEE2 (ENSPPAG00000021161) #21	SSBP1 (ENSPPAG00000035223) #22	TAS2R3 (ENSPPAG00000006982) ##25	TAS2R4 (ENSPPAG00000007093) ##25	TAS2R5 (ENSPPAG00000009772) ##25	PRSS37 (ENSPPAG00000033068) #23	CLEC5A (ENSPPAG00000037590) #24	TAS2R38 (ENSPPAG00000019525) #25	MGAM (ENSPPAG00000026007) #26	MGAM2 (ENSPPAG00000034149)	PRSS58 (ENSPPAG00000042862) #30	ENSPPAG00000026493	ENSPPAG00000025154	ENSPPAG00000000478	ENSPPAG00000025019	TRBV7-3 (ENSPPAG00000000508)	ENSPPAG00000009837
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	20	PARP12 (ENSPTRG00000019761)	KDM7A (ENSPTRG00000019762)	SLC37A3 (ENSPTRG00000019764) #7	RAB19 (ENSPTRG00000019765)	MKRN1 (ENSPTRG00000019766) ##8	DENND2A (ENSPTRG00000019768) #10	ADCK2 (ENSPTRG00000019770) #11	NDUFB2 (ENSPTRG00000019771) #12	BRAF (ENSPTRG00000019769) #14	MRPS33 (ENSPTRG00000019773) #16	TMEM178B (ENSPTRG00000047632) #17	AGK (ENSPTRG00000019775) #18	DENND11 (ENSPTRG00000019776) #19	ENSPTRG00000049781	WEE2 (ENSPTRG00000028383) #21	SSBP1 (ENSPTRG00000019778) #22	TAS2R3 (ENSPTRG00000019779) ##25	TAS2R4 (ENSPTRG00000040235) ##25	TAS2R5 (ENSPTRG00000019780) ##25	PRSS37 (ENSPTRG00000019781) #23	ENSPTRG00000040014	CLEC5A (ENSPTRG00000019784) #24	TAS2R38 (ENSPTRG00000019785) #25	MGAM (ENSPTRG00000019786) #26	ENSPTRG00000028382	PRSS58 (ENSPTRG00000019787) #30	ENSPTRG00000048550	ENSPTRG00000050465	ENSPTRG00000049536	ENSPTRG00000048217	ENSPTRG00000042693
Chimpanzee	MODERN SPECIES	579					ENSPTRG00000050561	ENSPTRG00000042822 ##8	ENSPTRG00000051830 #10	ENSPTRG00000047707 #11	ENSPTRG00000047330 #12	ENSPTRG00000051563 #14	ENSPTRG00000051927 #16	ENSPTRG00000045391 #17	ENSPTRG00000050750 #18	ENSPTRG00000044959	ENSPTRG00000044303 #19	ENSPTRG00000052697 #22	ENSPTRG00000050321 ##25	ENSPTRG00000047526 ##25	ENSPTRG00000043567 ##25	ENSPTRG00000045859 #23	OR9A1P (ENSPTRG00000043919)	ENSPTRG00000047806	ENSPTRG00000044670 #24	TAS2R38 (ENSPTRG00000045865) #25	ENSPTRG00000050880 #26	ENSPTRG00000048454	ENSPTRG00000044453 #30	ENSPTRG00000051456	ENSPTRG00000048222	ENSPTRG00000044775	ENSPTRG00000043817
Platyrrhini	DUPLICATION
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	10	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401.e.a #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00910000146873	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796.q.a #22	ENSGT00940000161483 #23	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.l #33	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.e.b	ENSGT00940000162509.e.a	ENSGT00940000154270.a.b.e.b	ENSGT00940000154542.b.a ##34
Cebidae	ANCESTRAL SPECIES	9	ENSGT00940000154649.B	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401.e.a #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00910000146873	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796.q.a #22	ENSGT00940000161483 #23	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT01100000263477.A.a.a #25	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT01020000230389.b.a.a.a.b #30	ENSGT01020000230389.b.a.a.a.a #31	ENSGT01050000244883.A.a.a.a.b.l #33	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.e.b	ENSGT00940000162509.e.a	ENSGT00940000154270.a.b.e.b	ENSGT00940000154542.b.a ##34
Cebidae_a	ANCESTRAL SPECIES	33	ENSGT00940000158039	ENSGT00940000163139	ENSGT00940000163296 #7	ENSGT00940000156717	ENSGT00950000183077.a.a.a.a.a.a ##8	ENSGT00950000182931.B.a.a #10	ENSGT00390000001536 #11	ENSGT00390000004044 #12	ENSGT00940000156154 #14	ENSGT00390000011401.e.a #16	ENSGT00390000015299.a.b.b.a #17	ENSGT00940000154961 #18	ENSGT00910000146873	ENSGT00590000083189 #19	ENSGT00940000158803 #21	ENSGT00390000002796.q.a #22	ENSGT00940000161483 #23	ENSGT00940000163413	ENSGT00910000144330 #24	ENSGT00940000161540 #26	ENSGT00940000163091	ENSGT01050000244883.A.a.a.a.b.l #33	ENSGT01020000230389.b.a.a.a.b #30	ENSGT00940000154460.a	ENSGT00940000164097	ENSGT00940000162509.e.b	ENSGT00940000154460.b.e.a.b	ENSGT00940000154542.b.b.k #34	ENSGT00940000154460.b.f	ENSGT00940000162707.m.b #35	ENSGT00940000155819.d
Capuchin	DUPLICATION
Capuchin	MODERN SPECIES	260	KDM7A (ENSCCAG00000036194)	ENSCCAG00000028375	SLC37A3 (ENSCCAG00000026819) #7	RAB19 (ENSCCAG00000029268)	MKRN1 (ENSCCAG00000037582) ##8	DENND2A (ENSCCAG00000027573) #10	ENSCCAG00000008528 #11	NDUFB2 (ENSCCAG00000029688) #12	BRAF (ENSCCAG00000031128) #14	ENSCCAG00000027727	ENSCCAG00000035520 #16	TMEM178B (ENSCCAG00000032284) #17	AGK (ENSCCAG00000036439) #18	DENND11 (ENSCCAG00000024825) #19	WEE2 (ENSCCAG00000033355) #21	ENSCCAG00000037419 #22	PRSS37 (ENSCCAG00000030678) #23	OR9A4 (ENSCCAG00000037742)	CLEC5A (ENSCCAG00000023805) #24	ENSCCAG00000030808 #26
Capuchin	MODERN SPECIES	16	ACOT12 (ENSCCAG00000010251)	SSBP2 (ENSCCAG00000029743)	ATG10 (ENSCCAG00000021612)	ENSCCAG00000023908	RPS23 (ENSCCAG00000022444)	ENSCCAG00000032614	ENSCCAG00000032509	ENSCCAG00000037444	ENSCCAG00000035743	TMEM167A (ENSCCAG00000021704)	XRCC4 (ENSCCAG00000021185)	VCAN (ENSCCAG00000026158)	ENSCCAG00000029740	HAPLN1 (ENSCCAG00000023370)	EDIL3 (ENSCCAG00000010698)	ENSCCAG00000036566 #22	COX7C (ENSCCAG00000021409)	ENSCCAG00000034902	ENSCCAG00000012037	RASA1 (ENSCCAG00000027537)	CCNH (ENSCCAG00000031898)	ENSCCAG00000033383	TMEM161B (ENSCCAG00000025610)	MEF2C (ENSCCAG00000015818)	ENSCCAG00000030581	CETN3 (ENSCCAG00000021491)	MBLAC2 (ENSCCAG00000027096)	POLR3G (ENSCCAG00000032288)	LYSMD3 (ENSCCAG00000032472)	ADGRV1 (ENSCCAG00000034134)	ENSCCAG00000034004
Bolivian squirrel monkey	MODERN SPECIES	77	PARP12 (ENSSBOG00000035883)	KDM7A (ENSSBOG00000028446)	ENSSBOG00000034695	RAB19 (ENSSBOG00000027926)	ENSSBOG00000023992 ##8	DENND2A (ENSSBOG00000027489) #10	ADCK2 (ENSSBOG00000005779) #11	ENSSBOG00000031343 #12	BRAF (ENSSBOG00000028284) #14	ENSSBOG00000022573 #16	TMEM178B (ENSSBOG00000022271) #17	AGK (ENSSBOG00000019979) #18	ENSSBOG00000031574	DENND11 (ENSSBOG00000034522) #19	WEE2 (ENSSBOG00000027383) #21	ENSSBOG00000029766 #22	PRSS37 (ENSSBOG00000009697) #23	ENSSBOG00000008809	CLEC5A (ENSSBOG00000026187) #24	MGAM (ENSSBOG00000030990) #26	ENSSBOG00000023030	ENSSBOG00000033951 #33	PRSS58 (ENSSBOG00000028857) #30	TRBV2 (ENSSBOG00000018075)	TRBV4-2 (ENSSBOG00000009509)	TRBV7-3 (ENSSBOG00000018082)	TRBV10-1 (ENSSBOG00000016754) #34	ENSSBOG00000018094	ENSSBOG00000014859 #35	TRBV14 (ENSSBOG00000029655)	TRBV16 (ENSSBOG00000013613)
Mas night monkey	MODERN SPECIES	984	PARP12 (ENSANAG00000027023)	KDM7A (ENSANAG00000020956)	SLC37A3 (ENSANAG00000036220) #7	RAB19 (ENSANAG00000031005)	MKRN1 (ENSANAG00000036978) ##8	DENND2A (ENSANAG00000034617) #10	ADCK2 (ENSANAG00000031411) #11	NDUFB2 (ENSANAG00000024539) #12	BRAF (ENSANAG00000030685) #14	ENSANAG00000036985 #16	ENSANAG00000035332 #17	AGK (ENSANAG00000034272) #18	ENSANAG00000025415	DENND11 (ENSANAG00000025741) #19	WEE2 (ENSANAG00000028062) #21	SSBP1 (ENSANAG00000021855) #22	PRSS37 (ENSANAG00000025837) #23	ENSANAG00000013359	CLEC5A (ENSANAG00000023741) #24	MGAM (ENSANAG00000026732) #26	MGAM2 (ENSANAG00000028334)	PRSS58 (ENSANAG00000025309) #30	TRBV2 (ENSANAG00000019846)	TRBV7-3 (ENSANAG00000025212)	TRBV10-1 (ENSANAG00000019734) #34	ENSANAG00000020863	TRBV7-9 (ENSANAG00000038442)	ENSANAG00000019721 #35	TRBV16 (ENSANAG00000006214)	ENSANAG00000006270	TRBV24-1 (ENSANAG00000005245)
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00390000002796.q.b #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00390000002796.q.b #22
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00390000002796.q.b #22
Bolivian squirrel monkey	MODERN SPECIES	43	RPS23 (ENSSBOG00000025991)	ENSSBOG00000019560	ENSSBOG00000025673	ENSSBOG00000034795	ENSSBOG00000035740	ENSSBOG00000033727	TMEM167A (ENSSBOG00000031099)	XRCC4 (ENSSBOG00000033444)	VCAN (ENSSBOG00000030525)	HAPLN1 (ENSSBOG00000020151)	EDIL3 (ENSSBOG00000034196)	ENSSBOG00000022503	COX7C (ENSSBOG00000023483)	RASA1 (ENSSBOG00000024025)	CCNH (ENSSBOG00000019490)	ENSSBOG00000028202 #22	TMEM161B (ENSSBOG00000024706)	ENSSBOG00000019037	ENSSBOG00000031181	MEF2C (ENSSBOG00000018897)	CETN3 (ENSSBOG00000033177)	MBLAC2 (ENSSBOG00000022218)	ENSSBOG00000029447	LYSMD3 (ENSSBOG00000036033)	ADGRV1 (ENSSBOG00000031018)	ARRDC3 (ENSSBOG00000022253)	NR2F1 (ENSSBOG00000021749)	ENSSBOG00000034164	FAM172A (ENSSBOG00000019860)	KIAA0825 (ENSSBOG00000032086)	ENSSBOG00000019818
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00390000002796.r #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00390000002796.r #22
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00390000002796.r #22
Bolivian squirrel monkey	DUPLICATION
Bolivian squirrel monkey	DUPLICATION
Bolivian squirrel monkey	MODERN SPECIES	44	CALU (ENSSBOG00000025729)	OPN1SW (ENSSBOG00000022139)	CCDC136 (ENSSBOG00000028704)	FLNC (ENSSBOG00000025708)	ATP6V1F (ENSSBOG00000029644)	ATP6V1FNB (ENSSBOG00000021896)	KCP (ENSSBOG00000024349)	IRF5 (ENSSBOG00000024381)	TNPO3 (ENSSBOG00000029642)	TSPAN33 (ENSSBOG00000026557)	SMO (ENSSBOG00000034649)	AHCYL2 (ENSSBOG00000027053)	STRIP2 (ENSSBOG00000026530)	SMKR1 (ENSSBOG00000023260)	NRF1 (ENSSBOG00000022785)	ENSSBOG00000016230 #22	UBE2H (ENSSBOG00000003551)	ZC3HC1 (ENSSBOG00000032787)	KLHDC10 (ENSSBOG00000023838)	TMEM209 (ENSSBOG00000034815)	SSMEM1 (ENSSBOG00000018209)	CPA2 (ENSSBOG00000035827)	CPA4 (ENSSBOG00000031999)	CPA5 (ENSSBOG00000024319)	CPA1 (ENSSBOG00000021629)	CEP41 (ENSSBOG00000020133)	ENSSBOG00000027781	COPG2 (ENSSBOG00000031750)	TSGA13 (ENSSBOG00000026243)	KLF14 (ENSSBOG00000005892)	ENSSBOG00000031877
Bolivian squirrel monkey	MODERN SPECIES	42	APIP (ENSSBOG00000027533)	ENSSBOG00000007623	CD44 (ENSSBOG00000020740)	SLC1A2 (ENSSBOG00000031126)	PAMR1 (ENSSBOG00000034633)	TRIM44 (ENSSBOG00000019501)	LDLRAD3 (ENSSBOG00000024561)	COMMD9 (ENSSBOG00000023383)	PRR5L (ENSSBOG00000033062)	TRAF6 (ENSSBOG00000028498)	RAG1 (ENSSBOG00000016673)	RAG2 (ENSSBOG00000017623)	IFTAP (ENSSBOG00000025933)	ENSSBOG00000033020	LRRC4C (ENSSBOG00000018653)	ENSSBOG00000031892 #22	ENSSBOG00000029311	API5 (ENSSBOG00000021448)	TTC17 (ENSSBOG00000027019)	ENSSBOG00000026907	HSD17B12 (ENSSBOG00000023716)	ALKBH3 (ENSSBOG00000023947)	C11orf96 (ENSSBOG00000012454)	ENSSBOG00000024546	ENSSBOG00000020375	ACCS (ENSSBOG00000025833)	EXT2 (ENSSBOG00000012532)	ALX4 (ENSSBOG00000032868)	CD82 (ENSSBOG00000029660)	TSPAN18 (ENSSBOG00000032945)	TP53I11 (ENSSBOG00000028120)
Bolivian squirrel monkey	MODERN SPECIES	68	GASK1B (ENSSBOG00000033158)	TMEM144 (ENSSBOG00000026389)	ENSSBOG00000000044	RXFP1 (ENSSBOG00000024491)	C4orf46 (ENSSBOG00000022705)	ETFDH (ENSSBOG00000019431)	ENSSBOG00000022964	FNIP2 (ENSSBOG00000021113)	C4orf45 (ENSSBOG00000033692)	ENSSBOG00000024250	RAPGEF2 (ENSSBOG00000033382)	ENSSBOG00000030741	FSTL5 (ENSSBOG00000034377)	SLC45A1 (ENSSBOG00000024389)	RERE (ENSSBOG00000028927)	ENSSBOG00000031412 #22	ENSSBOG00000028561	ENSSBOG00000024285	CA6 (ENSSBOG00000026428)	SLC2A7 (ENSSBOG00000022852)	SLC2A5 (ENSSBOG00000029662)	GPR157 (ENSSBOG00000026507)	H6PD (ENSSBOG00000027475)	SPSB1 (ENSSBOG00000035578)	SLC25A33 (ENSSBOG00000026413)	TMEM201 (ENSSBOG00000035187)	PIK3CD (ENSSBOG00000024261)	CLSTN1 (ENSSBOG00000025761)	CTNNBIP1 (ENSSBOG00000032108)	ENSSBOG00000031973	NMNAT1 (ENSSBOG00000022076)
Marmoset	MODERN SPECIES	20	ENSCJAG00000083981	ENSCJAG00000013424	RAB19 (ENSCJAG00000013457)	MKRN1 (ENSCJAG00000013474) ##8	DENND2A (ENSCJAG00000013487) #10	ENSCJAG00000074335	ADCK2 (ENSCJAG00000013509) #11	NDUFB2 (ENSCJAG00000013524) #12	BRAF (ENSCJAG00000013536) #14	ENSCJAG00000081978 #16	ENSCJAG00000086471	TMEM178B (ENSCJAG00000013588) #17	AGK (ENSCJAG00000013589) #18	DENND11 (ENSCJAG00000013621) #19	WEE2 (ENSCJAG00000013627) #21	SSBP1 (ENSCJAG00000013650) #22	PRSS37 (ENSCJAG00000013663) #23	ENSCJAG00000004026	ENSCJAG00000077616	CLEC5A (ENSCJAG00000087307) #24	TAS2R38 (ENSCJAG00000013686) #25	MGAM (ENSCJAG00000013692) #26	MGAM2 (ENSCJAG00000036807)	PRSS58 (ENSCJAG00000013813) #30	ENSCJAG00000062999 #31	ENSCJAG00000013826 #33	TRBV2 (ENSCJAG00000076376)	TRBV3-1 (ENSCJAG00000013834)	ENSCJAG00000062848	ENSCJAG00000081723 ##34	ENSCJAG00000060470
Mas night monkey	MODERN SPECIES	1054	ANKRD50 (ENSANAG00000035078)	FAT4 (ENSANAG00000032727)	INTU (ENSANAG00000030077)	SLC25A31 (ENSANAG00000029731)	HSPA4L (ENSANAG00000029426)	PLK4 (ENSANAG00000033097)	MFSD8 (ENSANAG00000036028)	ENSANAG00000002759	ABHD18 (ENSANAG00000024144)	LARP1B (ENSANAG00000034618)	PGRMC2 (ENSANAG00000036565)	ENSANAG00000035472	ENSANAG00000020721	ENSANAG00000029206	JADE1 (ENSANAG00000033708)	ENSANAG00000018791 #22	SCLT1 (ENSANAG00000028256)	C4orf33 (ENSANAG00000022551)
Tarsier	MODERN SPECIES	2580											MRPS33 (ENSTSYG00000030181) #16	TMEM178B (ENSTSYG00000030068) #17	AGK (ENSTSYG00000014497) #18	DENND11 (ENSTSYG00000014511) #19	WEE2 (ENSTSYG00000002451) #21	SSBP1 (ENSTSYG00000035240) #22