Salmoninae	ANCESTRAL SPECIES	218	ENSGT00390000011116.d	ENSGT00530000065415.g ##7	ENSGT00940000155871.h.b ##8	ENSGT00950000182839.B.a.a.l.e ##9	ENSGT00940000161014.k ##10	ENSGT00390000007747 #11	ENSGT00940000156039.t.b ##12	ENSGT00510000046843.b.e ##13	ENSGT00940000156910.h ##14	ENSGT00940000155210.a.a.c ##15	ENSGT00540000070023.c.b.g ##16	ENSGT00540000070023.d #16	ENSGT00940000161832.b.b #17	ENSGT00940000158037.e #18	ENSGT00940000158187.d #20	ENSGT00940000160423.a #22	ENSGT00940000166645.b #23	ENSGT01050000244951.a.b.a.b.a.e #24	ENSGT00530000063825.A.c.f #25	ENSGT00940000165765 #26	ENSGT00390000014700.a.f #27	ENSGT01050000244879.b.a.b.a.e #28	ENSGT00950000183132.A #29	ENSGT00940000164832.e.b #30
Salmoninae_a	ANCESTRAL SPECIES	13	ENSGT00940000155200	ENSGT00390000011116.c	ENSGT00530000065415.h #7	ENSGT00940000155871.h.a #8	ENSGT00950000182839.B.a.a.l.f #9	ENSGT00940000161014.l #10	ENSGT00390000007747.e #11	ENSGT00940000156039.t.a #12	ENSGT00510000046843.b.f #13	ENSGT00940000156910.g #14	ENSGT00940000155210.a.a.d #15	ENSGT00540000070023.d #16	ENSGT00940000161832.b.b #17	ENSGT00940000158037.e #18	ENSGT00940000158187.d #20	ENSGT00940000160423.a #22	ENSGT00940000166645.b #23	ENSGT01050000244951.a.b.a.b.a.e #24	ENSGT00530000063825.A.c.f #25	ENSGT00940000165765 #26	ENSGT00390000014700.a.f #27	ENSGT01050000244879.b.a.b.a.e #28	ENSGT00950000183132.A #29	ENSGT00940000164832.e.b #30	ENSGT00390000013899.a.a.o #31	ENSGT00940000164185.d #32	ENSGT00530000063817.b.a.e #34	ENSGT00940000165780.g #35	ENSGT00940000155455.h.d #36	ENSGT00940000156419.a.h #37	ENSGT00390000015442.f
Oncorhynchus	ANCESTRAL SPECIES	10	ENSGT00940000155200	ENSGT00390000011116.c	ENSGT00530000065415.h #7	ENSGT00940000155871.h.a #8	ENSGT00950000182839.B.a.a.l.f #9	ENSGT00940000161014.l #10	ENSGT00390000007747.e #11	ENSGT00940000156039.t.a #12	ENSGT00510000046843.b.f #13	ENSGT00940000156910.g #14	ENSGT00940000155210.a.a.d #15	ENSGT00540000070023.d.b #16	ENSGT00940000161832.b.b #17	ENSGT00940000158037.e #18	ENSGT00940000158187.d #20	ENSGT00940000160423.a #22	ENSGT00940000166645.b #23	ENSGT01050000244951.a.b.a.b.a.e #24	ENSGT00530000063825.A.c.f #25	ENSGT00940000165765 #26	ENSGT00390000014700.a.f #27	ENSGT01050000244879.b.a.b.a.e #28	ENSGT00950000183132.A #29	ENSGT00940000164832.e.b.f #30	ENSGT00390000013899.a.a.o #31	ENSGT00940000164185.d #32	ENSGT00530000063817.b.a.e #34	ENSGT00940000165780.g #35	ENSGT00940000155455.h.d #36	ENSGT00940000156419.a.h #37	ENSGT00940000153972.C.d
Rainbow trout	MODERN SPECIES	11	ENSOMYG00000006027 #7	kras (ENSOMYG00000006134) #8	RASSF8 (ENSOMYG00000006199) #9	bhlhe41 (ENSOMYG00000006233) #10	sspn (ENSOMYG00000006270) #11	ITPR2 (ENSOMYG00000009829) #12	plekhg7 (ENSOMYG00000019470) #13	ENSOMYG00000019821 #14	nudt4a (ENSOMYG00000022755) #15	ENSOMYG00000022776 #16	ENSOMYG00000022801 #17	nr1h4 (ENSOMYG00000022907) #18	ENSOMYG00000060426 #19	slc17a8 (ENSOMYG00000023216) #20	ENSOMYG00000072516 #21	arntl2 (ENSOMYG00000023343) #22	si:ch211-245j22.3 (ENSOMYG00000023470) #23	ppfibp1b (ENSOMYG00000024160) #24	endouc (ENSOMYG00000027424) #25	ENSOMYG00000027553 #26	ric8b (ENSOMYG00000027467) #27	rfx4 (ENSOMYG00000027576) #28	POLR3B (ENSOMYG00000007132) #29	ENSOMYG00000007239 #30	tmem263 (ENSOMYG00000076435) #31	si:ch73-62b13.1 (ENSOMYG00000007265) #32	ENSOMYG00000007280 #33	mterf2 (ENSOMYG00000007298) #34	zgc:153031 (ENSOMYG00000007309) #35	cry1b (ENSOMYG00000007326) #36	ENSOMYG00000008112 #37
Oncorhynchus_a	ANCESTRAL SPECIES	5	ENSGT00940000155200	ENSGT00390000011116.c	ENSGT00530000065415.h #7	ENSGT00940000155871.h.a #8	ENSGT00950000182839.B.a.a.l.f #9	ENSGT00940000161014.l #10	ENSGT00390000007747.e #11	ENSGT00940000156039.t.a #12	ENSGT00510000046843.b.f #13	ENSGT00940000156910.g #14	ENSGT00940000155210.a.a.d #15	ENSGT00540000070023.d.b #16	ENSGT00940000161832.b.b #17	ENSGT00940000158037.e #18	ENSGT00940000158187.d #20	ENSGT00940000160423.a #22	ENSGT00940000166645.b #23	ENSGT01050000244951.a.b.a.b.a.e #24	ENSGT00390000005178.a	ENSGT00530000063825.A.c.f #25	ENSGT00940000165765 #26	ENSGT00390000014700.a.f #27	ENSGT01050000244879.b.a.b.a.e #28	ENSGT00950000183132.A #29	ENSGT00940000164832.e.b.f #30	ENSGT00390000013899.a.a.o #31	ENSGT00940000164185.d #32	ENSGT00530000063817.b.a.e #34	ENSGT00940000165780.g #35	ENSGT00940000155455.h.d #36	ENSGT00940000156419.a.h #37
Coho salmon	MODERN SPECIES	14	ENSOKIG00005043524	banp (ENSOKIG00005043581)	ENSOKIG00005043596 #7	kras (ENSOKIG00005043614) #8	RASSF8 (ENSOKIG00005043659) #9	bhlhe41 (ENSOKIG00005043674) #10	sspn (ENSOKIG00005043695) #11	ITPR2 (ENSOKIG00005044020) #12	plekhg7 (ENSOKIG00005047310) #13	EEA1 (ENSOKIG00005047381) #14	nudt4a (ENSOKIG00005047625) #15	ENSOKIG00005047635 ##16	nr1h4 (ENSOKIG00005047676) #18	ENSOKIG00005047826 #17	slc17a8 (ENSOKIG00005047859) #20	arntl2 (ENSOKIG00005048022) #22	ppfibp1b (ENSOKIG00005048119) #24	REP15 (ENSOKIG00005006083)	endouc (ENSOKIG00005006096) #25	ENSOKIG00005006112 #26	ric8b (ENSOKIG00005006140) #27	rfx4 (ENSOKIG00005006189) #28	ENSOKIG00005006322 #29	ENSOKIG00005006671 #30	tmem263 (ENSOKIG00005006694) #31	si:ch73-62b13.1 (ENSOKIG00005006699) #32	mterf2 (ENSOKIG00005006702) #34	zgc:153031 (ENSOKIG00005006707) #35	cry1b (ENSOKIG00005006749) #36	ABTB3 (ENSOKIG00005007030) #37	panx2 (ENSOKIG00005007333)
Chinook salmon	MODERN SPECIES	10	ENSOTSG00005035410	ENSOTSG00005035421 #7	ENSOTSG00005035433 ##8	RASSF8 (ENSOTSG00005035486) #9	bhlhe41 (ENSOTSG00005035488) #10	sspn (ENSOTSG00005035489) #11	ENSOTSG00005035490	ITPR2 (ENSOTSG00005035497) #12	plekhg7 (ENSOTSG00005035500) #13	EEA1 (ENSOTSG00005035523) #14	nudt4a (ENSOTSG00005037325) #15	ENSOTSG00005037329 #16	ENSOTSG00005037333 #17	nr1h4 (ENSOTSG00005037348) #18	slc17a8 (ENSOTSG00005037838) #20	arntl2 (ENSOTSG00005037846) #22	si:ch211-245j22.3 (ENSOTSG00005037885) #23	ppfibp1b (ENSOTSG00005037922) #24	ENSOTSG00005040059	endouc (ENSOTSG00005040060) #25	ENSOTSG00005040061 #26	ric8b (ENSOTSG00005040062) #27	rfx4 (ENSOTSG00005040075) #28	ENSOTSG00005040083 #29	ENSOTSG00005040088 #30	tmem263 (ENSOTSG00005040090) #31	si:ch73-62b13.1 (ENSOTSG00005040093) #32	mterf2 (ENSOTSG00005040095) #34	zgc:153031 (ENSOTSG00005040098) #35	cry1b (ENSOTSG00005040102) #36	ABTB3 (ENSOTSG00005040135) #37
Salmo	ANCESTRAL SPECIES	9	ENSGT00390000001368.l	ENSGT00940000155200.sb.a	ENSGT00390000011116.c	ENSGT00530000065415.h #7	ENSGT00940000155871.h.a #8	ENSGT00950000182839.B.a.a.l.f #9	ENSGT00940000161014.l #10	ENSGT00940000156039.t.a #12	ENSGT00510000046843.b.f #13	ENSGT00940000156910.g #14	ENSGT00940000155210.a.a.d #15	ENSGT00540000070023.d #16	ENSGT00940000161832.b.b #17	ENSGT00940000158037.e #18	ENSGT00940000158187.d #20	ENSGT00940000160423.a #22	ENSGT00940000166645.b #23	ENSGT01050000244951.a.b.a.b.a.e #24	ENSGT00530000063825.A.c.f #25	ENSGT00940000165765 #26	ENSGT00390000014700.a.f #27	ENSGT01050000244879.b.a.b.a.e #28	ENSGT00950000183132.A.k #29	ENSGT00940000164832.e.b #30	ENSGT00390000013899.a.a.o #31	ENSGT00940000164185.d #32	ENSGT00530000063817.b.a.e #34	ENSGT00940000155455.h.d #36	ENSGT00940000156419.a.h #37	ENSGT00390000015442.f	ENSGT00940000153972.C.d
Atlantic salmon	MODERN SPECIES	1	ENSSSAG00000099589	banp (ENSSSAG00000043342)	ENSSSAG00000043478 #7	rask (ENSSSAG00000099686) #8	RASSF8 (ENSSSAG00000043531) #9	bhlh3 (ENSSSAG00000043542) #10	ITPR2 (ENSSSAG00000043713) #12	plekhg7 (ENSSSAG00000053006) #13	ENSSSAG00000053119 #14	nudt4a (ENSSSAG00000108471) #15	ube2n (ENSSSAG00000055801) #16	ENSSSAG00000084043 #17	nr1h4 (ENSSSAG00000055846) #18	ENSSSAG00000084768 #27	slc17a8 (ENSSSAG00000057061) #20	arntl2 (ENSSSAG00000059155) #22	si:ch211-245j22.3 (ENSSSAG00000059268) #23	ppfibp1b (ENSSSAG00000059704) #24	endouc (ENSSSAG00000071184) #25	ENSSSAG00000071189 #26	rfx4 (ENSSSAG00000071211) #28	ENSSSAG00000071265 #29	ENSSSAG00000065899 #30	tmem263 (ENSSSAG00000100537) #31	si:ch73-62b13.1 (ENSSSAG00000092172) #32	mterf2 (ENSSSAG00000100696) #34	cry1b (ENSSSAG00000071693) #36	btbd11 (ENSSSAG00000071875) #37	mlc1 (ENSSSAG00000071981)	panx2 (ENSSSAG00000086268)	selenoo1 (ENSSSAG00000003932)
River trout	MODERN SPECIES	37	ENSSTUG00000003851	banp (ENSSTUG00000003968)	ENSSTUG00000004016	ENSSTUG00000004049 #7	kras (ENSSTUG00000004056) #8	RASSF8 (ENSSTUG00000004102) #9	bhlhe41 (ENSSTUG00000004136) #10	ITPR2 (ENSSTUG00000004225) #12	plekhg7 (ENSSTUG00000004570) #13	EEA1 (ENSSTUG00000004908) #14	nudt4a (ENSSTUG00000007102) #15	ENSSTUG00000007113 #16	ENSSTUG00000007151 #17	nr1h4 (ENSSTUG00000007159) #18	slc17a8 (ENSSTUG00000007261) #20	arntl2 (ENSSTUG00000007309) #22	si:ch211-245j22.3 (ENSSTUG00000007525) #23	ppfibp1b (ENSSTUG00000007629) #24	endouc (ENSSTUG00000008141) #25	ENSSTUG00000008157 #26	ric8b (ENSSTUG00000008177) #27	rfx4 (ENSSTUG00000008214) #28	POLR3B (ENSSTUG00000008246) #29	ENSSTUG00000008594 #30	ENSSTUG00000008629	tmem263 (ENSSTUG00000008637) #31	si:ch73-62b13.1 (ENSSTUG00000008649) #32	mterf2 (ENSSTUG00000008656) #34	cry1b (ENSSTUG00000008668) #36	ABTB3 (ENSSTUG00000008770) #37	mlc1 (ENSSTUG00000009122)
Huchen	MODERN SPECIES	2742												UBE2N (ENSHHUG00000052187) ##16	ENSHHUG00000052185 #17	nr1h4 (ENSHHUG00000052136) #18	slc17a8 (ENSHHUG00000052131) #20	arntl2 (ENSHHUG00000052125) #22