Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000175494	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00960000187690	ENSGT00940000165267
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000175494	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00960000187690
Primates	ANCESTRAL SPECIES	10	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Strepsirrhini	ANCESTRAL SPECIES	18	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b.e	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461	ENSGT00390000003428 #36
Lemuriformes	ANCESTRAL SPECIES	39	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b.e	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461	ENSGT00390000003428 #36
Lemuriformes_a	ANCESTRAL SPECIES	30	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b.e	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461	ENSGT00390000003428 #36
Coquerels sifaka	MODERN SPECIES	219												ENSPCOG00000014837 #18	FIP1L1 (ENSPCOG00000021280) #19	LNX1 (ENSPCOG00000019418) #20	CHIC2 (ENSPCOG00000021210) #21	GSX2 (ENSPCOG00000023707) #22	PDGFRA (ENSPCOG00000025472) #23	KIT (ENSPCOG00000024040) #24	KDR (ENSPCOG00000013368) #25	SRD5A3 (ENSPCOG00000028827) #26	TMEM165 (ENSPCOG00000027016) #27	CLOCK (ENSPCOG00000019043) #28	PDCL2 (ENSPCOG00000008474) #29	NMU (ENSPCOG00000009907) #30	EXOC1L (ENSPCOG00000012908) #31	ENSPCOG00000022570 #32	ENSPCOG00000025929 #33	CRACD (ENSPCOG00000023584) #34	AASDH (ENSPCOG00000017744) #35	ENSPCOG00000018898 #36	PAICS (ENSPCOG00000020490) #37
Greater bamboo lemur	MODERN SPECIES	178	ENSPSMG00000022122	FRYL (ENSPSMG00000021994)	OCIAD1 (ENSPSMG00000021639)	OCIAD2 (ENSPSMG00000021515)	CWH43 (ENSPSMG00000021491)	ENSPSMG00000021464	DCUN1D4 (ENSPSMG00000021445)	SGCB (ENSPSMG00000021382)	SPATA18 (ENSPSMG00000021358)	ENSPSMG00000021331	RASL11B (ENSPSMG00000021259)	SCFD2 (ENSPSMG00000021233) #18	FIP1L1 (ENSPSMG00000020888) #19	LNX1 (ENSPSMG00000020471) #20	CHIC2 (ENSPSMG00000020440) #21	GSX2 (ENSPSMG00000020423) #22	PDGFRA (ENSPSMG00000020413) #23	KIT (ENSPSMG00000020340) #24	KDR (ENSPSMG00000020248) #25	SRD5A3 (ENSPSMG00000020219) #26	TMEM165 (ENSPSMG00000020185) #27	CLOCK (ENSPSMG00000020165) #28	PDCL2 (ENSPSMG00000020136) #29	NMU (ENSPSMG00000020128) #30	EXOC1L (ENSPSMG00000020116) #31	EXOC1 (ENSPSMG00000020052) #32	CEP135 (ENSPSMG00000019872) #33	CRACD (ENSPSMG00000019816) #34	AASDH (ENSPSMG00000019697) #35	ENSPSMG00000019626	PPAT (ENSPSMG00000019621) #36
Mouse lemur	MODERN SPECIES	23			ENSMICG00000032390	PTPRG (ENSMICG00000016378)	C3orf14 (ENSMICG00000043764)	FEZF2 (ENSMICG00000005546)	ENSMICG00000035241	SYNPR (ENSMICG00000016442)	C3orf49 (ENSMICG00000016446)	THOC7 (ENSMICG00000045229)	ATXN7 (ENSMICG00000014525)	ENSMICG00000041614	ENSMICG00000043369	MAGI1 (ENSMICG00000009535)	ENSMICG00000046117	GSX2 (ENSMICG00000027995) #22	CHIC2 (ENSMICG00000034358) #21	LNX1 (ENSMICG00000008163) #20	FIP1L1 (ENSMICG00000008149) #19	ENSMICG00000030479 #18	ENSMICG00000048001 #18	RASL11B (ENSMICG00000042188)	SPATA18 (ENSMICG00000012954)	SGCB (ENSMICG00000004494)	ENSMICG00000042369	DCUN1D4 (ENSMICG00000012931)	CWH43 (ENSMICG00000004623)	OCIAD2 (ENSMICG00000006147)	OCIAD1 (ENSMICG00000006142)	FRYL (ENSMICG00000026961)	ENSMICG00000043813
Bushbaby	MODERN SPECIES	198	FRYL (ENSOGAG00000004514)	OCIAD1 (ENSOGAG00000009160)	OCIAD2 (ENSOGAG00000011039)	CWH43 (ENSOGAG00000001101)	DCUN1D4 (ENSOGAG00000012891)	LRRC66 (ENSOGAG00000025206)	SGCB (ENSOGAG00000005669)	SPATA18 (ENSOGAG00000026234)	USP46 (ENSOGAG00000008762)	RASL11B (ENSOGAG00000009539)	ENSOGAG00000031587 #18	ENSOGAG00000009543 #18	FIP1L1 (ENSOGAG00000009545) #19	LNX1 (ENSOGAG00000009552) #20	CHIC2 (ENSOGAG00000009570) #21	GSX2 (ENSOGAG00000015271) #22	PDGFRA (ENSOGAG00000012544) #23	ENSOGAG00000025123	KIT (ENSOGAG00000009550) #24	KDR (ENSOGAG00000013598) #25	SRD5A3 (ENSOGAG00000012340) #26	TMEM165 (ENSOGAG00000012462) #27	CLOCK (ENSOGAG00000012464) #28	PDCL2 (ENSOGAG00000012475) #29	ENSOGAG00000031389	EXOC1L (ENSOGAG00000005859) #31	EXOC1 (ENSOGAG00000005861) #32
Haplorrhini	ANCESTRAL SPECIES	23	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b.c	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00940000154326.a.a.h.a.a	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36	ENSGT00390000010172 #37
Cebidae	ANCESTRAL SPECIES	4	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b.c	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00940000154326.a.a.h.a.a	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36	ENSGT00390000010172 #37
Marmoset	MODERN SPECIES	15	OCIAD2 (ENSCJAG00000018637)	CWH43 (ENSCJAG00000018615)	DCUN1D4 (ENSCJAG00000018601)	LRRC66 (ENSCJAG00000018599)	SGCB (ENSCJAG00000018579)	SPATA18 (ENSCJAG00000018594)	USP46 (ENSCJAG00000018556)	ERVMER34-1 (ENSCJAG00000062102)	ENSCJAG00000072048	SCFD2 (ENSCJAG00000018545) #18	FIP1L1 (ENSCJAG00000018490)	LNX1 (ENSCJAG00000018469) #20	ENSCJAG00000082324	ENSCJAG00000083456	CHIC2 (ENSCJAG00000041961) #21	GSX2 (ENSCJAG00000018454) #22	ENSCJAG00000068751	ENSCJAG00000086980	PDGFRA (ENSCJAG00000018415) #23	KIT (ENSCJAG00000018396) #24	KDR (ENSCJAG00000018352) #25	SRD5A3 (ENSCJAG00000052753) #26	TMEM165 (ENSCJAG00000046061) #27	CLOCK (ENSCJAG00000018261) #28	PDCL2 (ENSCJAG00000018258) #29	ENSCJAG00000075161	NMU (ENSCJAG00000018237) #30	EXOC1L (ENSCJAG00000085497) #31	EXOC1 (ENSCJAG00000018175) #32	ENSCJAG00000072934	CEP135 (ENSCJAG00000018119) #33
Cebidae_a	ANCESTRAL SPECIES	63	ENSGT00950000182926.b.d.c.b.a.b.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b.c	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b.g	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00940000154326.a.a.h.a.a	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36	ENSGT00390000010172 #37
Capuchin	MODERN SPECIES	124	CWH43 (ENSCCAG00000020925)	DCUN1D4 (ENSCCAG00000016912)	LRRC66 (ENSCCAG00000037453)	SGCB (ENSCCAG00000012614)	SPATA18 (ENSCCAG00000020113)	ENSCCAG00000030356	ENSCCAG00000032234	RASL11B (ENSCCAG00000037560)	ENSCCAG00000031404	ENSCCAG00000030526	ENSCCAG00000023197	SCFD2 (ENSCCAG00000031373) #18	FIP1L1 (ENSCCAG00000021687) #19	LNX1 (ENSCCAG00000034596) #20	CHIC2 (ENSCCAG00000030790) #21	GSX2 (ENSCCAG00000023920) #22	ENSCCAG00000022442	PDGFRA (ENSCCAG00000023887) #23	ENSCCAG00000012432	KIT (ENSCCAG00000033583) #24	KDR (ENSCCAG00000027345) #25	ENSCCAG00000012342	SRD5A3 (ENSCCAG00000037850) #26	ENSCCAG00000012793	TMEM165 (ENSCCAG00000031593) #27	CLOCK (ENSCCAG00000031941) #28	PDCL2 (ENSCCAG00000021001) #29	NMU (ENSCCAG00000033866) #30	ENSCCAG00000019432	EXOC1L (ENSCCAG00000029016) #31	EXOC1 (ENSCCAG00000023309) #32
Bolivian squirrel monkey	MODERN SPECIES	99	ENSSBOG00000021390	OCIAD2 (ENSSBOG00000034198)	CWH43 (ENSSBOG00000032930)	DCUN1D4 (ENSSBOG00000030384)	LRRC66 (ENSSBOG00000025555)	SGCB (ENSSBOG00000027981)	SPATA18 (ENSSBOG00000003084)	ENSSBOG00000013697	USP46 (ENSSBOG00000016128)	RASL11B (ENSSBOG00000019612)	SCFD2 (ENSSBOG00000033762) #18	FIP1L1 (ENSSBOG00000033039) #19	LNX1 (ENSSBOG00000034544) #20	ENSSBOG00000010731	CHIC2 (ENSSBOG00000015084) #21	GSX2 (ENSSBOG00000035576) #22	PDGFRA (ENSSBOG00000022806) #23	ENSSBOG00000024307	KIT (ENSSBOG00000031748) #24	KDR (ENSSBOG00000025028) #25	SRD5A3 (ENSSBOG00000026663) #26	TMEM165 (ENSSBOG00000025423) #27	CLOCK (ENSSBOG00000030594) #28	PDCL2 (ENSSBOG00000027890) #29	NMU (ENSSBOG00000028898) #30	ENSSBOG00000017845	EXOC1L (ENSSBOG00000023113) #31	EXOC1 (ENSSBOG00000034813) #32	CEP135 (ENSSBOG00000023582) #33	CRACD (ENSSBOG00000034674) #34	AASDH (ENSSBOG00000029836) #35
Mas night monkey	MODERN SPECIES	469	OCIAD2 (ENSANAG00000033240)	CWH43 (ENSANAG00000036936)	DCUN1D4 (ENSANAG00000006089)	LRRC66 (ENSANAG00000027871)	SGCB (ENSANAG00000037522)	SPATA18 (ENSANAG00000024358)	USP46 (ENSANAG00000037399)	RASL11B (ENSANAG00000030414)	ENSANAG00000036362	ENSANAG00000027223	SCFD2 (ENSANAG00000037492) #18	ENSANAG00000032461	LNX1 (ENSANAG00000028251) #20	ENSANAG00000037095	CHIC2 (ENSANAG00000028323) #21	GSX2 (ENSANAG00000019366) #22	PDGFRA (ENSANAG00000023924) #23	ENSANAG00000033625	KIT (ENSANAG00000030367) #24	ENSANAG00000038115	KDR (ENSANAG00000032646) #25	SRD5A3 (ENSANAG00000035851) #26	TMEM165 (ENSANAG00000021886) #27	CLOCK (ENSANAG00000023882) #28	PDCL2 (ENSANAG00000020418) #29	NMU (ENSANAG00000031034) #30	EXOC1L (ENSANAG00000037409) #31	EXOC1 (ENSANAG00000020021) #32	CEP135 (ENSANAG00000037147) #33	CRACD (ENSANAG00000021913) #34	AASDH (ENSANAG00000035915) #35
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000013770.d	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Hominoidea	ANCESTRAL SPECIES	10	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000013770.d	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00910000147929	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Hominidae	ANCESTRAL SPECIES	12	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000013770.d	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00910000147929	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01060000248700	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000013770.d	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00910000147929	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00910000148425
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000013770.d	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00910000147929	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00910000148425
Pan	ANCESTRAL SPECIES	7	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000013770.d	ENSGT00390000003601.b #21	ENSGT00950000182965.a.b.b.a	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00910000147929	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00910000148425
Chimpanzee	MODERN SPECIES	17	CWH43 (ENSPTRG00000016049)	DCUN1D4 (ENSPTRG00000016051)	LRRC66 (ENSPTRG00000016052)	SGCB (ENSPTRG00000016053)	SPATA18 (ENSPTRG00000016054)	USP46 (ENSPTRG00000043855)	ERVMER34-1 (ENSPTRG00000051750)	ENSPTRG00000046219	RASL11B (ENSPTRG00000016058)	SCFD2 (ENSPTRG00000016059) #18	FIP1L1 (ENSPTRG00000016060)	ENSPTRG00000048363	LNX1 (ENSPTRG00000016062) #20	CHIC2 (ENSPTRG00000016064) #21	ENSPTRG00000047699	GSX2 (ENSPTRG00000016065) #22	ENSPTRG00000050400	PDGFRA (ENSPTRG00000016066) #23	KIT (ENSPTRG00000016067) #24	KDR (ENSPTRG00000016069) #25	SRD5A3 (ENSPTRG00000016070) #26	TMEM165 (ENSPTRG00000016071) #27	CLOCK (ENSPTRG00000016072) #28	PDCL2 (ENSPTRG00000016073) #29	NMU (ENSPTRG00000016074) #30	EXOC1L (ENSPTRG00000046040) #31	EXOC1 (ENSPTRG00000023159) #32	CEP135 (ENSPTRG00000016077) #33	ENSPTRG00000045977	CRACD (ENSPTRG00000016078) #34	ENSPTRG00000044386
Bonobo	MODERN SPECIES	17	CWH43 (ENSPPAG00000039872)	DCUN1D4 (ENSPPAG00000042595)	LRRC66 (ENSPPAG00000032413)	SGCB (ENSPPAG00000036001)	SPATA18 (ENSPPAG00000026258)	USP46 (ENSPPAG00000011705)	ERVMER34-1 (ENSPPAG00000019038)	ENSPPAG00000025880	RASL11B (ENSPPAG00000031269)	SCFD2 (ENSPPAG00000001904) #18	ENSPPAG00000029594	ENSPPAG00000032520	LNX1 (ENSPPAG00000037579) #20	CHIC2 (ENSPPAG00000010433) #21	ENSPPAG00000032307	GSX2 (ENSPPAG00000030659) #22	ENSPPAG00000039875	PDGFRA (ENSPPAG00000031952) #23	KIT (ENSPPAG00000032952) #24	KDR (ENSPPAG00000042774) #25	SRD5A3 (ENSPPAG00000028976) #26	TMEM165 (ENSPPAG00000035865) #27	CLOCK (ENSPPAG00000029615) #28	PDCL2 (ENSPPAG00000038480) #29	NMU (ENSPPAG00000038124) #30	EXOC1L (ENSPPAG00000028553) #31	EXOC1 (ENSPPAG00000043855) #32	CEP135 (ENSPPAG00000043866) #33	ENSPPAG00000042190	CRACD (ENSPPAG00000032829) #34	ENSPPAG00000035697
Human	MODERN SPECIES	16	OCIAD1 (ENSG00000109180)	OCIAD2 (ENSG00000145247)	CWH43 (ENSG00000109182)	DCUN1D4 (ENSG00000109184)	LRRC66 (ENSG00000188993)	SGCB (ENSG00000163069)	SPATA18 (ENSG00000163071)	USP46 (ENSG00000109189)	ERVMER34-1 (ENSG00000226887)	RASL11B (ENSG00000128045)	SCFD2 (ENSG00000184178) #18	FIP1L1 (ENSG00000145216) #19	ENSG00000282278	LNX1 (ENSG00000072201) #20	CHIC2 (ENSG00000109220) #21	GSX2 (ENSG00000180613) #22	PDGFRA (ENSG00000134853) #23	KIT (ENSG00000157404) #24	KDR (ENSG00000128052) #25	SRD5A3 (ENSG00000128039) #26	ENSG00000288695	TMEM165 (ENSG00000134851) #27	CLOCK (ENSG00000134852) #28	PDCL2 (ENSG00000163440) #29	NMU (ENSG00000109255) #30	EXOC1L (ENSG00000250821) #31	EXOC1 (ENSG00000090989) #32	CEP135 (ENSG00000174799) #33	CRACD (ENSG00000109265) #34	AASDH (ENSG00000157426) #35	PPAT (ENSG00000128059) #36
Gorilla	MODERN SPECIES	17	ENSGGOG00000003303	DCUN1D4 (ENSGGOG00000014656)	LRRC66 (ENSGGOG00000011068)	SGCB (ENSGGOG00000016842)	SPATA18 (ENSGGOG00000008496)	ENSGGOG00000024859	USP46 (ENSGGOG00000017197)	ERVMER34-1 (ENSGGOG00000039041)	RASL11B (ENSGGOG00000012197)	SCFD2 (ENSGGOG00000012209) #18	FIP1L1 (ENSGGOG00000006427) #19	LNX1 (ENSGGOG00000010056) #20	ENSGGOG00000010061	CHIC2 (ENSGGOG00000027084) #21	ENSGGOG00000039849	GSX2 (ENSGGOG00000007928) #22	PDGFRA (ENSGGOG00000010615) #23	ENSGGOG00000026556	KIT (ENSGGOG00000015440) #24	KDR (ENSGGOG00000012821) #25	SRD5A3 (ENSGGOG00000022870) #26	TMEM165 (ENSGGOG00000015618) #27	CLOCK (ENSGGOG00000005753) #28	PDCL2 (ENSGGOG00000007908) #29	NMU (ENSGGOG00000007920) #30	EXOC1L (ENSGGOG00000038477) #31	EXOC1 (ENSGGOG00000026473) #32	CEP135 (ENSGGOG00000003682) #33	ENSGGOG00000043121	CRACD (ENSGGOG00000001148) #34	AASDH (ENSGGOG00000023372) #35
Orangutan	MODERN SPECIES	17	UGT2B15 (ENSPPYG00000040838)	UGT2B17 (ENSPPYG00000039653)	TMPRSS11E (ENSPPYG00000014725)	YTHDC1 (ENSPPYG00000014726)	DCUN1D4 (ENSPPYG00000014782)	LRRC66 (ENSPPYG00000014781)	SGCB (ENSPPYG00000014780)	SPATA18 (ENSPPYG00000014779)	USP46 (ENSPPYG00000014777)	ERVMER34-1 (ENSPPYG00000014776)	RASL11B (ENSPPYG00000037548)	SCFD2 (ENSPPYG00000014774) #18	FIP1L1 (ENSPPYG00000014773) #19	LNX1 (ENSPPYG00000014772) #20	CHIC2 (ENSPPYG00000014770) #21	GSX2 (ENSPPYG00000014769) #22	PDGFRA (ENSPPYG00000014767) #23	KIT (ENSPPYG00000014766) #24	KDR (ENSPPYG00000014765) #25	SRD5A3 (ENSPPYG00000014764) #26	TMEM165 (ENSPPYG00000014763) #27	CLOCK (ENSPPYG00000014762) #28	PDCL2 (ENSPPYG00000014761) #29	NMU (ENSPPYG00000014760) #30	EXOC1L (ENSPPYG00000014759) #31	EXOC1 (ENSPPYG00000014758) #32	ENSPPYG00000014757 #33	CRACD (ENSPPYG00000014756) #34	AASDH (ENSPPYG00000014755) #35	ENSPPYG00000036324	PPAT (ENSPPYG00000029568) #36
Gibbon	MODERN SPECIES	24	ENSNLEG00000007630	UGT2B7 (ENSNLEG00000007627)	UGT2A3 (ENSNLEG00000007622)	UGT2B10 (ENSNLEG00000007639)	DCUN1D4 (ENSNLEG00000033951)	LRRC66 (ENSNLEG00000008139)	SGCB (ENSNLEG00000031021)	SPATA18 (ENSNLEG00000008151)	USP46 (ENSNLEG00000008161)	ERVMER34-1 (ENSNLEG00000018485)	RASL11B (ENSNLEG00000008176)	SCFD2 (ENSNLEG00000008185) #18	FIP1L1 (ENSNLEG00000008187) #19	LNX1 (ENSNLEG00000008256) #20	ENSNLEG00000029752	GSX2 (ENSNLEG00000008278) #22	ENSNLEG00000030233	PDGFRA (ENSNLEG00000008285) #23	KIT (ENSNLEG00000008295) #24	KDR (ENSNLEG00000008365) #25	SRD5A3 (ENSNLEG00000032360) #26	TMEM165 (ENSNLEG00000008484) #27	CLOCK (ENSNLEG00000008499) #28	PDCL2 (ENSNLEG00000008545) #29	NMU (ENSNLEG00000008552) #30	EXOC1L (ENSNLEG00000032675) #31	EXOC1 (ENSNLEG00000008574) #32	CEP135 (ENSNLEG00000008640) #33	ENSNLEG00000036094	CRACD (ENSNLEG00000008674) #34	AASDH (ENSNLEG00000008681) #35
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00940000155193.a.a.f.b	ENSGT00440000033811 #35
Rhinopithecus	ANCESTRAL SPECIES	680															ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00390000004690.a.b.h	ENSGT00940000156021 #23	ENSGT00940000155626 #24
Black snub-nosed monkey	MODERN SPECIES	605															CHIC2 (ENSRBIG00000028683) #21	GSX2 (ENSRBIG00000032461) #22	ENSRBIG00000028543	PDGFRA (ENSRBIG00000042315) #23	KIT (ENSRBIG00000038068) #24
Golden snub-nosed monkey	MODERN SPECIES	3334															CHIC2 (ENSRROG00000033010) #21	GSX2 (ENSRROG00000029808) #22	ENSRROG00000044882	PDGFRA (ENSRROG00000038033) #23	ENSRROG00000027506	KIT (ENSRROG00000040734) #24
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00940000154433.a.b.l.a	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00940000155193.a.a.f.b
Vervet Monkey	MODERN SPECIES	26	SULT1E1 (ENSCSAG00000004937)	SULT1B1 (ENSCSAG00000004940)	ENSCSAG00000000422	UGT2A1 (ENSCSAG00000004944)	UGT2B4 (ENSCSAG00000004947)	DCUN1D4 (ENSCSAG00000004948)	LRRC66 (ENSCSAG00000004952)	SGCB (ENSCSAG00000004955)	SPATA18 (ENSCSAG00000004960)	USP46 (ENSCSAG00000004963)	ERVMER34-1 (ENSCSAG00000000423)	RASL11B (ENSCSAG00000004968)	SCFD2 (ENSCSAG00000004970) #18	ENSCSAG00000004975	LNX1 (ENSCSAG00000004979) #20	GSX2 (ENSCSAG00000004981) #22	PDGFRA (ENSCSAG00000004987) #23	KIT (ENSCSAG00000004992) #24	ENSCSAG00000004997	KDR (ENSCSAG00000005005) #25	SRD5A3 (ENSCSAG00000005010) #26	TMEM165 (ENSCSAG00000005013) #27	CLOCK (ENSCSAG00000005019) #28	PDCL2 (ENSCSAG00000005023) #29	ENSCSAG00000000424	NMU (ENSCSAG00000005030) #30	EXOC1 (ENSCSAG00000005038) #32	CEP135 (ENSCSAG00000005042) #33	CRACD (ENSCSAG00000005049) #34	ENSCSAG00000005053	AASDH (ENSCSAG00000005057) #35
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.a.a.a.a	ENSGT00910000147676	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00940000154433.a.b.l.a	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35
Macaca	ANCESTRAL SPECIES	26				ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.a.a.a.a	ENSGT00910000147676	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00940000154433.a.b.l.a	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Pig-tailed macaque	MODERN SPECIES	306	MND1 (ENSMNEG00000045163)	TMEM131L (ENSMNEG00000032766)	ENSMNEG00000017763	TLR2 (ENSMNEG00000007084)	RNF175 (ENSMNEG00000040105)	SFRP2 (ENSMNEG00000038959)	ENSMNEG00000045502	PLRG1 (ENSMNEG00000042073)	FGB (ENSMNEG00000036263)	ENSMNEG00000034578	FGG (ENSMNEG00000038909)	LRAT (ENSMNEG00000014904)	RBM46 (ENSMNEG00000002787)	CHIC2 (ENSMNEG00000028920) #21	ENSMNEG00000034287	GSX2 (ENSMNEG00000036971) #22	ENSMNEG00000042355	PDGFRA (ENSMNEG00000034868) #23	KIT (ENSMNEG00000033149) #24	KDR (ENSMNEG00000042884) #25	SRD5A3 (ENSMNEG00000031682) #26	TMEM165 (ENSMNEG00000029130) #27	CLOCK (ENSMNEG00000031474) #28	PDCL2 (ENSMNEG00000036647) #29	NMU (ENSMNEG00000036198) #30	ENSMNEG00000043005	EXOC1L (ENSMNEG00000036784) #31	EXOC1 (ENSMNEG00000030837) #32	CEP135 (ENSMNEG00000032627) #33	ENSMNEG00000029915	CRACD (ENSMNEG00000037712) #34
Macaca_a	ANCESTRAL SPECIES	12	ENSGT00940000155133.b.i	ENSGT00940000153692.A	ENSGT00950000183015.D	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00980000202055.A.b.a	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461	ENSGT00390000003428 #36
Rhesus	MODERN SPECIES	15	PTPN13 (ENSMMUG00000003726)	ENSMMUG00000063428	MAPK10 (ENSMMUG00000008342)	ARHGAP24 (ENSMMUG00000008341)	ENSMMUG00000051109	DCUN1D4 (ENSMMUG00000008579)	LRRC66 (ENSMMUG00000018939)	SPATA18 (ENSMMUG00000018943)	USP46 (ENSMMUG00000023333)	ERVMER34-1 (ENSMMUG00000007951)	ENSMMUG00000059074	RASL11B (ENSMMUG00000052882)	SCFD2 (ENSMMUG00000017393) #18	LNX1 (ENSMMUG00000017401) #20	CHIC2 (ENSMMUG00000050730) #21	GSX2 (ENSMMUG00000048263) #22	PDGFRA (ENSMMUG00000017395) #23	ENSMMUG00000059659	ENSMMUG00000060048	KIT (ENSMMUG00000060342) #24	KDR (ENSMMUG00000012669) #25	SRD5A3 (ENSMMUG00000010113) #26	TMEM165 (ENSMMUG00000001918) #27	CLOCK (ENSMMUG00000001919) #28	PDCL2 (ENSMMUG00000006271) #29	NMU (ENSMMUG00000043692) #30	EXOC1L (ENSMMUG00000039297) #31	EXOC1 (ENSMMUG00000023427) #32	CEP135 (ENSMMUG00000009925) #33	CRACD (ENSMMUG00000016358) #34	AASDH (ENSMMUG00000016360) #35
Crab-eating macaque	MODERN SPECIES	15	ENSMFAG00000063621	USP46 (ENSMFAG00000041158)	ERVMER34-1 (ENSMFAG00000047188)	ENSMFAG00000047996	RASL11B (ENSMFAG00000037233)	ENSMFAG00000059603	ENSMFAG00000058674	SCFD2 (ENSMFAG00000042186) #18	FIP1L1 (ENSMFAG00000034699) #19	LNX1 (ENSMFAG00000000338) #20	ENSMFAG00000049605	ENSMFAG00000062722	ENSMFAG00000058181	CHIC2 (ENSMFAG00000035340) #21	ENSMFAG00000054734	GSX2 (ENSMFAG00000038491) #22	PDGFRA (ENSMFAG00000046187) #23	KIT (ENSMFAG00000041033) #24	KDR (ENSMFAG00000043201) #25	ENSMFAG00000059515	ENSMFAG00000064599	TMEM165 (ENSMFAG00000034541) #27	CLOCK (ENSMFAG00000043377) #28	PDCL2 (ENSMFAG00000001261) #29	NMU (ENSMFAG00000040660) #30	EXOC1L (ENSMFAG00000056471) #31	EXOC1 (ENSMFAG00000040087) #32	CEP135 (ENSMFAG00000032993) #33	CRACD (ENSMFAG00000001807) #34	AASDH (ENSMFAG00000033449) #35	PPAT (ENSMFAG00000041933) #36
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.a.a.a.a	ENSGT00910000147676	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00940000154433.a.b.l.a	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35
Olive baboon	MODERN SPECIES	13	ENSPANG00000043682	LRRC66 (ENSPANG00000010298)	SGCB (ENSPANG00000007510)	SPATA18 (ENSPANG00000009236)	ENSPANG00000040500	USP46 (ENSPANG00000008485)	ERVMER34-1 (ENSPANG00000039612)	ENSPANG00000042571	ENSPANG00000041881	RASL11B (ENSPANG00000038411)	SCFD2 (ENSPANG00000017814) #18	ENSPANG00000047571	ENSPANG00000011213	LNX1 (ENSPANG00000012441) #20	CHIC2 (ENSPANG00000019862) #21	GSX2 (ENSPANG00000021441) #22	PDGFRA (ENSPANG00000021718) #23	KIT (ENSPANG00000025525) #24	KDR (ENSPANG00000009816) #25	SRD5A3 (ENSPANG00000023285) #26	TMEM165 (ENSPANG00000008925) #27	CLOCK (ENSPANG00000006882) #28	PDCL2 (ENSPANG00000007651) #29	NMU (ENSPANG00000024021) #30	ENSPANG00000040931	ENSPANG00000039918	EXOC1L (ENSPANG00000049134) #31	EXOC1 (ENSPANG00000009817) #32	CEP135 (ENSPANG00000007654) #33	ENSPANG00000033113	CRACD (ENSPANG00000006883) #34
Cercopithecinae_d	ANCESTRAL SPECIES	124		ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.a.a.a.a	ENSGT00910000147676	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000013770.d	ENSGT00910000147421	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00390000004690.a.b.h	ENSGT00940000154509	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00940000154433.a.b.l.a	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33
Sooty mangabey	MODERN SPECIES	180			DCUN1D4 (ENSCATG00000034641)	LRRC66 (ENSCATG00000020032)	SGCB (ENSCATG00000002242)	SPATA18 (ENSCATG00000039449)	ENSCATG00000036801	ENSCATG00000020254	USP46 (ENSCATG00000011235)	RASL11B (ENSCATG00000035296)	SCFD2 (ENSCATG00000043635) #18	ENSCATG00000041740	LNX1 (ENSCATG00000030273) #20	ENSCATG00000038682	CHIC2 (ENSCATG00000041345) #21	GSX2 (ENSCATG00000039825) #22	ENSCATG00000036558	ENSCATG00000038972	PDGFRA (ENSCATG00000018830) #23	KIT (ENSCATG00000004601) #24	KDR (ENSCATG00000026660) #25	ENSCATG00000035741	SRD5A3 (ENSCATG00000040052) #26	TMEM165 (ENSCATG00000036895) #27	ENSCATG00000017377	CLOCK (ENSCATG00000002646) #28	PDCL2 (ENSCATG00000041890) #29	ENSCATG00000040815	NMU (ENSCATG00000000632) #30	EXOC1L (ENSCATG00000029322) #31	EXOC1 (ENSCATG00000043473) #32
Drill	DUPLICATION
Drill	MODERN SPECIES	1324	NUP58 (ENSMLEG00000014833)	ENSMLEG00000000254	ENSMLEG00000036990	SHISA2 (ENSMLEG00000034103)	RNF6 (ENSMLEG00000038569)	CDK8 (ENSMLEG00000040071)	WASF3 (ENSMLEG00000040168)	GPR12 (ENSMLEG00000002545)	ENSMLEG00000033598	ENSMLEG00000024280	RASL11A (ENSMLEG00000036089)	GTF3A (ENSMLEG00000039703)	MTIF3 (ENSMLEG00000039110)	LNX2 (ENSMLEG00000039062)	ENSMLEG00000041048	ENSMLEG00000041805 #22	PDX1 (ENSMLEG00000032316)	CDX2 (ENSMLEG00000037430)	FLT3 (ENSMLEG00000037398)	PAN3 (ENSMLEG00000008619)	ENSMLEG00000003098	FLT1 (ENSMLEG00000034284)	ENSMLEG00000038076	ENSMLEG00000036390	ENSMLEG00000042438	POMP (ENSMLEG00000039576)	SLC46A3 (ENSMLEG00000044293)	ENSMLEG00000006158
Drill	MODERN SPECIES	1498								RASL11B (ENSMLEG00000029372)	ENSMLEG00000029279	SCFD2 (ENSMLEG00000029673) #18	FIP1L1 (ENSMLEG00000041763) #19	ENSMLEG00000029704	LNX1 (ENSMLEG00000036156) #20	ENSMLEG00000030253	CHIC2 (ENSMLEG00000043511) #21	GSX2 (ENSMLEG00000042662) #22	ENSMLEG00000039734	ENSMLEG00000039253	PDGFRA (ENSMLEG00000029675) #23
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000175494	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00960000187690	ENSGT00940000165267
Tree shrew	MODERN SPECIES	7334															CHIC2 (ENSTBEG00000004331) #21	GSX2 (ENSTBEG00000004457) #22
Glires	ANCESTRAL SPECIES	8	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000175494	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00960000187690	ENSGT00940000165267
Lagomorpha	ANCESTRAL SPECIES	265										ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000175494	ENSGT00940000156021 #23
Rabbit	MODERN SPECIES	487				ENSOCUG00000031987	ENSOCUG00000033928	ENSOCUG00000023694	ENSOCUG00000021781	ENSOCUG00000029361	ENSOCUG00000039604	USP46 (ENSOCUG00000017031)	ENSOCUG00000000719	SCFD2 (ENSOCUG00000000722) #18	ENSOCUG00000000100	LNX1 (ENSOCUG00000023368) #20	CHIC2 (ENSOCUG00000035920) #21	GSX2 (ENSOCUG00000004209) #22	ENSOCUG00000037538	PDGFRA (ENSOCUG00000000258) #23
Pika	MODERN SPECIES	159															CHIC2 (ENSOPRG00000011489) #21	GSX2 (ENSOPRG00000011503) #22
Rodentia	ANCESTRAL SPECIES	13	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00960000187690	ENSGT00940000165267	ENSGT00440000033811 #35
Rodentia_B	ANCESTRAL SPECIES	19	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00960000187690	ENSGT00940000165267	ENSGT00940000169459	ENSGT00940000161471 #34
Kangaroo rat	MODERN SPECIES	327	ENSDORG00000013286	Slc10a4-ps (ENSDORG00000010557)	Fryl (ENSDORG00000010559)	ENSDORG00000014483	Ociad2 (ENSDORG00000016565)	Cwh43 (ENSDORG00000012169)	Dcun1d4 (ENSDORG00000009641)	Sgcb (ENSDORG00000009646)	ENSDORG00000013679	Usp46 (ENSDORG00000005800)	Rasl11b (ENSDORG00000030008)	Scfd2 (ENSDORG00000005627) #18	ENSDORG00000005629	Lnx1 (ENSDORG00000005635) #20	Chic2 (ENSDORG00000027994) #21	Gsx2 (ENSDORG00000000416) #22	Pdgfra (ENSDORG00000002763) #23	Kit (ENSDORG00000007317) #24	Kdr (ENSDORG00000006837) #25	Srd5a3 (ENSDORG00000008012) #26	Tmem165 (ENSDORG00000008013) #27	Clock (ENSDORG00000008014) #28	Pdcl2 (ENSDORG00000009617) #29	Exoc1l (ENSDORG00000023656) #31	Exoc1 (ENSDORG00000012170) #32	ENSDORG00000026235	Cep135 (ENSDORG00000001804) #33	ENSDORG00000000162	ENSDORG00000027747	ENSDORG00000025512	ENSDORG00000028255 #35
Myomorpha	ANCESTRAL SPECIES	19	ENSGT00610000086058.a	ENSGT00900000143492	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000165267	ENSGT00940000169459	ENSGT00940000161471 #34	ENSGT00440000033811 #35
Lesser Egyptian jerboa	MODERN SPECIES	68	ENSJJAG00000017344	ENSJJAG00000000670	ENSJJAG00000022501	Ociad2 (ENSJJAG00000014970)	Cwh43 (ENSJJAG00000003882)	Dcun1d4 (ENSJJAG00000004315)	Sgcb (ENSJJAG00000014651)	ENSJJAG00000019112	Usp46 (ENSJJAG00000014611)	Rasl11b (ENSJJAG00000022168)	Scfd2 (ENSJJAG00000012848) #18	ENSJJAG00000021984	ENSJJAG00000013826	Lnx1 (ENSJJAG00000011865) #20	Chic2 (ENSJJAG00000022415) #21	Gsx2 (ENSJJAG00000011370) #22	Pdgfra (ENSJJAG00000015846) #23	Kit (ENSJJAG00000002257) #24	Ivns1abp (ENSJJAG00000020317)	Swt1 (ENSJJAG00000015927)	Trmt1l (ENSJJAG00000010929)	ENSJJAG00000011187	ENSJJAG00000024308	Edem3 (ENSJJAG00000014873)	1700025G04Rik (ENSJJAG00000015023)	ENSJJAG00000017918	ENSJJAG00000014344	Colgalt2 (ENSJJAG00000012914)	Rgl1 (ENSJJAG00000019151)	Arpc5 (ENSJJAG00000000241)	Ncf2 (ENSJJAG00000019127)
Muroidea	ANCESTRAL SPECIES	17	ENSGT00610000086058.a	ENSGT00900000143492	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36	ENSGT00390000010172 #37
Muroidea_A	ANCESTRAL SPECIES	13	ENSGT00610000086058.a	ENSGT00900000143492	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36	ENSGT00390000010172 #37
Cricetidae	ANCESTRAL SPECIES	14	ENSGT00610000086058.a	ENSGT00900000143492	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36	ENSGT00390000010172.f #37
Cricetinae	ANCESTRAL SPECIES	9	ENSGT00610000086058.a	ENSGT00900000143492	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36	ENSGT00390000010172.f #37
Chinese hamster chok1gshd	MODERN SPECIES	44	Cwh43 (ENSCGRG00001001137)	Dcun1d4 (ENSCGRG00001001891)	ENSCGRG00001011436	Lrrc66 (ENSCGRG00001017360)	Sgcb (ENSCGRG00001022740)	Spata18 (ENSCGRG00001005385)	ENSCGRG00001013783	ENSCGRG00001000842	Usp46 (ENSCGRG00001018619)	ENSCGRG00001002572	Rasl11b (ENSCGRG00001011283)	Scfd2 (ENSCGRG00001012042) #18	Fip1l1 (ENSCGRG00001018568)	Lnx1 (ENSCGRG00001011729) #20	Chic2 (ENSCGRG00001024567) #21	Gsx2 (ENSCGRG00001002346) #22	ENSCGRG00001012414	Pdgfra (ENSCGRG00001015525) #23	ENSCGRG00001010956	Kit (ENSCGRG00001013653) #24	ENSCGRG00001009055	Kdr (ENSCGRG00001019345) #25	Srd5a3 (ENSCGRG00001002000) #26	Tmem165 (ENSCGRG00001016385) #27	Clock (ENSCGRG00001012746) #28	Pdcl2 (ENSCGRG00001016710) #29	Nmu (ENSCGRG00001012189) #30	Exoc1l (ENSCGRG00001015240) #31	Exoc1 (ENSCGRG00001019607) #32	Cep135 (ENSCGRG00001020803) #33	ENSCGRG00001021318
Golden Hamster	MODERN SPECIES	720	ENSMAUG00000012930	ENSMAUG00000017420	ENSMAUG00000015840	Ociad2 (ENSMAUG00000014577)	Cwh43 (ENSMAUG00000008567)	Dcun1d4 (ENSMAUG00000000472)	Lrrc66 (ENSMAUG00000009663)	Sgcb (ENSMAUG00000006887)	Spata18 (ENSMAUG00000011598)	Usp46 (ENSMAUG00000017316)	Rasl11b (ENSMAUG00000003048)	Scfd2 (ENSMAUG00000011399) #18	Fip1l1 (ENSMAUG00000010526)	Lnx1 (ENSMAUG00000021129) #20	Chic2 (ENSMAUG00000012879) #21	Gsx2 (ENSMAUG00000022163) #22	Pdgfra (ENSMAUG00000018986) #23	ENSMAUG00000013726 #24	Kdr (ENSMAUG00000016126) #25	Srd5a3 (ENSMAUG00000003018) #26	Tmem165 (ENSMAUG00000019967) #27	Clock (ENSMAUG00000012196) #28	Pdcl2 (ENSMAUG00000016445) #29	Nmu (ENSMAUG00000004029) #30	Exoc1l (ENSMAUG00000008650) #31	Exoc1 (ENSMAUG00000000845) #32	Cep135 (ENSMAUG00000011590) #33	Cracd (ENSMAUG00000021186) #34	Aasdh (ENSMAUG00000009600) #35	Ppat (ENSMAUG00000018321) #36	Paics (ENSMAUG00000017200) #37
Cricetidae_B	ANCESTRAL SPECIES	9	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36	ENSGT00390000010172.f #37
Prairie vole	MODERN SPECIES	349	Fryl (ENSMOCG00000012881)	ENSMOCG00000016810	ENSMOCG00000000836	ENSMOCG00000000283	Cwh43 (ENSMOCG00000009924)	Dcun1d4 (ENSMOCG00000012545)	Lrrc66 (ENSMOCG00000017330)	Sgcb (ENSMOCG00000000430)	Spata18 (ENSMOCG00000019737)	Usp46 (ENSMOCG00000016898)	Rasl11b (ENSMOCG00000022471)	Scfd2 (ENSMOCG00000015774) #18	Fip1l1 (ENSMOCG00000008020)	Lnx1 (ENSMOCG00000015978) #20	Chic2 (ENSMOCG00000000811) #21	Gsx2 (ENSMOCG00000010227) #22	Pdgfra (ENSMOCG00000012103) #23	Kit (ENSMOCG00000007652) #24	Kdr (ENSMOCG00000017085) #25	Srd5a3 (ENSMOCG00000006257) #26	Tmem165 (ENSMOCG00000013834) #27	Clock (ENSMOCG00000000757) #28	Pdcl2 (ENSMOCG00000014108) #29	Nmu (ENSMOCG00000002680) #30	Exoc1l (ENSMOCG00000002325) #31	Exoc1 (ENSMOCG00000019131) #32	Cep135 (ENSMOCG00000022436) #33	ENSMOCG00000016902	ENSMOCG00000000709	ENSMOCG00000016218	ENSMOCG00000017325 #35
Northern American deer mouse	MODERN SPECIES	1	Fryl (ENSPEMG00000011628)	Ociad1 (ENSPEMG00000018262)	Ociad2 (ENSPEMG00000003543)	Cwh43 (ENSPEMG00000004208)	Dcun1d4 (ENSPEMG00000009638)	Lrrc66 (ENSPEMG00000017432)	Sgcb (ENSPEMG00000024200)	Spata18 (ENSPEMG00000024192)	Usp46 (ENSPEMG00000009974)	Rasl11b (ENSPEMG00000025524)	Scfd2 (ENSPEMG00000009457) #18	ENSPEMG00000026634	Fip1l1 (ENSPEMG00000002025)	Lnx1 (ENSPEMG00000001631) #20	Chic2 (ENSPEMG00000016307) #21	Gsx2 (ENSPEMG00000008341) #22	Pdgfra (ENSPEMG00000007844) #23	ENSPEMG00000025221	Kit (ENSPEMG00000011261) #24	Kdr (ENSPEMG00000018642) #25	Srd5a3 (ENSPEMG00000010609) #26	Tmem165 (ENSPEMG00000009507) #27	Clock (ENSPEMG00000014058) #28	Pdcl2 (ENSPEMG00000011759) #29	Nmu (ENSPEMG00000014701) #30	Exoc1l (ENSPEMG00000015388) #31	Exoc1 (ENSPEMG00000014937) #32	Cep135 (ENSPEMG00000012282) #33	Cracd (ENSPEMG00000010216) #34	Aasdh (ENSPEMG00000011196) #35	Ppat (ENSPEMG00000016464) #36
Murinae	ANCESTRAL SPECIES	12	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36	ENSGT00390000010172 #37
Mus	ANCESTRAL SPECIES	14	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36	ENSGT00390000010172 #37
Mus_A	ANCESTRAL SPECIES	6	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36	ENSGT00390000010172 #37
Mus_B	ANCESTRAL SPECIES	4	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36	ENSGT00390000010172 #37
Mouse	MODERN SPECIES	14	Slc10a4 (ENSMUSG00000029219)	Fryl (ENSMUSG00000070733)	Ociad1 (ENSMUSG00000029152)	Ociad2 (ENSMUSG00000029153)	Cwh43 (ENSMUSG00000029154)	Dcun1d4 (ENSMUSG00000051674)	Lrrc66 (ENSMUSG00000067206)	Sgcb (ENSMUSG00000029156)	Spata18 (ENSMUSG00000029155)	Usp46 (ENSMUSG00000054814)	Rasl11b (ENSMUSG00000049907)	Scfd2 (ENSMUSG00000062110) #18	Fip1l1 (ENSMUSG00000029227)	Lnx1 (ENSMUSG00000029228) #20	Chic2 (ENSMUSG00000029229) #21	Gsx2 (ENSMUSG00000035946) #22	Pdgfra (ENSMUSG00000029231) #23	Kit (ENSMUSG00000005672) #24	Kdr (ENSMUSG00000062960) #25	Srd5a3 (ENSMUSG00000029233) #26	Tmem165 (ENSMUSG00000029234) #27	Clock (ENSMUSG00000029238) #28	Pdcl2 (ENSMUSG00000029235) #29	Nmu (ENSMUSG00000029236) #30	Exoc1l (ENSMUSG00000091204) #31	Exoc1 (ENSMUSG00000036435) #32	Cep135 (ENSMUSG00000036403) #33	Cracd (ENSMUSG00000036377) #34	Aasdh (ENSMUSG00000055923) #35	Ppat (ENSMUSG00000029246) #36	Paics (ENSMUSG00000029247) #37
Mus_C	ANCESTRAL SPECIES	4	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36	ENSGT00390000010172 #37
spretus	MODERN SPECIES	14	MGP_SPRETEiJ_G0028287	Fryl (MGP_SPRETEiJ_G0028288)	Ociad1 (MGP_SPRETEiJ_G0028289)	Ociad2 (MGP_SPRETEiJ_G0028290)	Cwh43 (MGP_SPRETEiJ_G0028291)	Dcun1d4 (MGP_SPRETEiJ_G0028292)	MGP_SPRETEiJ_G0028293	Sgcb (MGP_SPRETEiJ_G0028294)	Spata18 (MGP_SPRETEiJ_G0028295)	Usp46 (MGP_SPRETEiJ_G0028296)	Rasl11b (MGP_SPRETEiJ_G0028297)	Scfd2 (MGP_SPRETEiJ_G0028298) #18	Fip1l1 (MGP_SPRETEiJ_G0028299)	Lnx1 (MGP_SPRETEiJ_G0028300) #20	Chic2 (MGP_SPRETEiJ_G0028301) #21	Gsx2 (MGP_SPRETEiJ_G0028302) #22	Pdgfra (MGP_SPRETEiJ_G0028303) #23	Kit (MGP_SPRETEiJ_G0028304) #24	Kdr (MGP_SPRETEiJ_G0028305) #25	Srd5a3 (MGP_SPRETEiJ_G0028306) #26	Tmem165 (MGP_SPRETEiJ_G0028307) #27	Clock (MGP_SPRETEiJ_G0028308) #28	Pdcl2 (MGP_SPRETEiJ_G0028309) #29	Nmu (MGP_SPRETEiJ_G0028310) #30	Exoc1 (MGP_SPRETEiJ_G0028311) #32	Cep135 (MGP_SPRETEiJ_G0028312) #33	Cracd (MGP_SPRETEiJ_G0028313) #34	MGP_SPRETEiJ_G0028314 #35	Ppat (MGP_SPRETEiJ_G0028315) #36	MGP_SPRETEiJ_G0028316 #37	Srp72 (MGP_SPRETEiJ_G0028317)
Steppe mouse	MODERN SPECIES	274	ENSMSIG00000025682	Cwh43 (ENSMSIG00000025727)	Dcun1d4 (ENSMSIG00000025811)	Lrrc66 (ENSMSIG00000025948)	Sgcb (ENSMSIG00000025957)	Spata18 (ENSMSIG00000025979)	ENSMSIG00000026041	Usp46 (ENSMSIG00000026049)	ENSMSIG00000026077	Rasl11b (ENSMSIG00000026099)	Scfd2 (ENSMSIG00000026110) #18	Fip1l1 (ENSMSIG00000026147)	Lnx1 (ENSMSIG00000026465) #20	ENSMSIG00000026501	Chic2 (ENSMSIG00000026507) #21	Gsx2 (ENSMSIG00000026518) #22
Ryukyu mouse	MODERN SPECIES	14	Gm10135 (MGP_CAROLIEiJ_G0027292)	Fryl (MGP_CAROLIEiJ_G0027293)	Ociad1 (MGP_CAROLIEiJ_G0027294)	Ociad2 (MGP_CAROLIEiJ_G0027295)	Cwh43 (MGP_CAROLIEiJ_G0027296)	Dcun1d4 (MGP_CAROLIEiJ_G0027297)	MGP_CAROLIEiJ_G0027298	Sgcb (MGP_CAROLIEiJ_G0027299)	Spata18 (MGP_CAROLIEiJ_G0027300)	Usp46 (MGP_CAROLIEiJ_G0027301)	Rasl11b (MGP_CAROLIEiJ_G0027302)	Scfd2 (MGP_CAROLIEiJ_G0027303) #18	Fip1l1 (MGP_CAROLIEiJ_G0027304)	Lnx1 (MGP_CAROLIEiJ_G0027305) #20	Chic2 (MGP_CAROLIEiJ_G0027306) #21	Gsx2 (MGP_CAROLIEiJ_G0027307) #22	Bicdl1 (MGP_CAROLIEiJ_G0027308)	Pdgfra (MGP_CAROLIEiJ_G0027309) #23	Kit (MGP_CAROLIEiJ_G0027310) #24	Kdr (MGP_CAROLIEiJ_G0027311) #25	Srd5a3 (MGP_CAROLIEiJ_G0027312) #26	Tmem165 (MGP_CAROLIEiJ_G0027313) #27	Clock (MGP_CAROLIEiJ_G0027314) #28	Pdcl2 (MGP_CAROLIEiJ_G0027315) #29	Nmu (MGP_CAROLIEiJ_G0027316) #30	Exoc1 (MGP_CAROLIEiJ_G0027317) #32	Cep135 (MGP_CAROLIEiJ_G0027318) #33	Cracd (MGP_CAROLIEiJ_G0027319) #34	Aasdh (MGP_CAROLIEiJ_G0027320) #35	Ppat (MGP_CAROLIEiJ_G0027321) #36	Paics (MGP_CAROLIEiJ_G0027322) #37
Shrew mouse	MODERN SPECIES	4	Zar1 (MGP_PahariEiJ_G0017073)	Fryl (MGP_PahariEiJ_G0017074)	Ociad1 (MGP_PahariEiJ_G0017075)	Ociad2 (MGP_PahariEiJ_G0017076)	Cwh43 (MGP_PahariEiJ_G0017077)	Dcun1d4 (MGP_PahariEiJ_G0017078)	MGP_PahariEiJ_G0017079	Sgcb (MGP_PahariEiJ_G0017080)	Spata18 (MGP_PahariEiJ_G0017081)	Usp46 (MGP_PahariEiJ_G0017082)	Rasl11b (MGP_PahariEiJ_G0017083)	Scfd2 (MGP_PahariEiJ_G0017084) #18	Fip1l1 (MGP_PahariEiJ_G0017085)	Lnx1 (MGP_PahariEiJ_G0017086) #20	Chic2 (MGP_PahariEiJ_G0017087) #21	Gsx2 (MGP_PahariEiJ_G0017088) #22	Pdgfra (MGP_PahariEiJ_G0017089) #23	Kit (MGP_PahariEiJ_G0017090) #24	Kdr (MGP_PahariEiJ_G0017091) #25	Srd5a3 (MGP_PahariEiJ_G0017092) #26	Tmem165 (MGP_PahariEiJ_G0017093) #27	Clock (MGP_PahariEiJ_G0017094) #28	Pdcl2 (MGP_PahariEiJ_G0017095) #29	Nmu (MGP_PahariEiJ_G0017096) #30	Exoc1 (MGP_PahariEiJ_G0017097) #32	Cep135 (MGP_PahariEiJ_G0017098) #33	MGP_PahariEiJ_G0017099 #34	Aasdh (MGP_PahariEiJ_G0017100) #35	Ppat (MGP_PahariEiJ_G0017101) #36	Paics (MGP_PahariEiJ_G0017102) #37	Srp72 (MGP_PahariEiJ_G0017103)
Rat	MODERN SPECIES	5	Fryl (ENSRNOG00000002248)	Ociad1 (ENSRNOG00000002205)	Ociad2 (ENSRNOG00000002196)	Cwh43 (ENSRNOG00000002174)	Dcun1d4 (ENSRNOG00000002152)	Lrrc66 (ENSRNOG00000026585)	Sgcb (ENSRNOG00000002135)	Spata18 (ENSRNOG00000002120)	LOC100363494 (ENSRNOG00000068757)	Usp46 (ENSRNOG00000002106)	Rasl11b (ENSRNOG00000002097)	Scfd2 (ENSRNOG00000026828) #18	Fip1l1 (ENSRNOG00000002275)	Lnx1 (ENSRNOG00000002272) #20	Chic2 (ENSRNOG00000002267) #21	Gsx2 (ENSRNOG00000002266) #22	Pdgfra (ENSRNOG00000002244) #23	ENSRNOG00000063288	Kit (ENSRNOG00000002227) #24	Kdr (ENSRNOG00000046829) #25	Srd5a3 (ENSRNOG00000002216) #26	Tmem165 (ENSRNOG00000002199) #27	Clock (ENSRNOG00000002175) #28	Pdcl2 (ENSRNOG00000002169) #29	Nmu (ENSRNOG00000002164) #30	Exoc1l (ENSRNOG00000050100) #31	Exoc1 (ENSRNOG00000002144) #32	Cep135 (ENSRNOG00000002153) #33	Cracd (ENSRNOG00000002139) #34	Aasdh (ENSRNOG00000002137) #35	Ppat (ENSRNOG00000002128) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	842												ENSNGAG00000021379 #18	Fip1l1 (ENSNGAG00000008849)	Lnx1 (ENSNGAG00000002832) #20	Chic2 (ENSNGAG00000016892) #21	Gsx2 (ENSNGAG00000008405) #22	Pdgfra (ENSNGAG00000009344) #23	Kit (ENSNGAG00000015645) #24	Kdr (ENSNGAG00000002982) #25	Srd5a3 (ENSNGAG00000013026) #26	Tmem165 (ENSNGAG00000012244) #27	Clock (ENSNGAG00000017297) #28	Pdcl2 (ENSNGAG00000012358) #29	Nmu (ENSNGAG00000020747) #30	Exoc1l (ENSNGAG00000020410) #31	Exoc1 (ENSNGAG00000000680) #32	Cep135 (ENSNGAG00000024071) #33	ENSNGAG00000022872	ENSNGAG00000022499	ENSNGAG00000011459 #35	Ppat (ENSNGAG00000003683) #36
Rodentia_A	ANCESTRAL SPECIES	20	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532.i	ENSGT00390000013532.j	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT01030000238073	ENSGT00940000165267	ENSGT00440000033811 #35
Sciuridae	ANCESTRAL SPECIES	19	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532.i	ENSGT00390000013532.j	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT01030000238073	ENSGT00940000165267	ENSGT00440000033811 #35
Marmotini	ANCESTRAL SPECIES	26	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532.i	ENSGT00390000013532.j	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453.f #33	ENSGT01030000238073	ENSGT00940000165267	ENSGT00940000159453.e.a #33	ENSGT00940000161471 #34
Marmotini_b	ANCESTRAL SPECIES	48	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532.i	ENSGT00390000013532.j	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453.f #33	ENSGT01030000238073	ENSGT00940000165267	ENSGT00940000159453.e.a #33	ENSGT00940000161471 #34
Arctic ground squirrel	MODERN SPECIES	2	FRYL (ENSUPAG00010020086)	OCIAD1 (ENSUPAG00010020236)	OCIAD2 (ENSUPAG00010020280)	CWH43 (ENSUPAG00010020291)	DCUN1D4 (ENSUPAG00010020336)	LRRC66 (ENSUPAG00010020366)	SGCB (ENSUPAG00010020369)	ENSUPAG00010020374	ENSUPAG00010020376	USP46 (ENSUPAG00010020388)	RASL11B (ENSUPAG00010020408)	SCFD2 (ENSUPAG00010020412) #18	ENSUPAG00010020429	LNX1 (ENSUPAG00010020578) #20	CHIC2 (ENSUPAG00010020698) #21	GSX2 (ENSUPAG00010020700) #22	PDGFRA (ENSUPAG00010020707) #23	KIT (ENSUPAG00010020754) #24	KDR (ENSUPAG00010020785) #25	SRD5A3 (ENSUPAG00010020831) #26	TMEM165 (ENSUPAG00010020837) #27	CLOCK (ENSUPAG00010020844) #28	PDCL2 (ENSUPAG00010020882) #29	NMU (ENSUPAG00010020889) #30	EXOC1L (ENSUPAG00010020900) #31	EXOC1 (ENSUPAG00010020914) #32	ENSUPAG00010021057 #33	CRACD (ENSUPAG00010021307) #34	AASDH (ENSUPAG00010021378) #35	PPAT (ENSUPAG00010021383) #36	ENSUPAG00010021392
Squirrel	MODERN SPECIES	82	OCIAD1 (ENSSTOG00000014963)	OCIAD2 (ENSSTOG00000014971)	CWH43 (ENSSTOG00000014976)	DCUN1D4 (ENSSTOG00000013799)	LRRC66 (ENSSTOG00000022844)	SGCB (ENSSTOG00000004569)	ENSSTOG00000032283	ENSSTOG00000004581	USP46 (ENSSTOG00000012149)	ENSSTOG00000033365	RASL11B (ENSSTOG00000027610)	SCFD2 (ENSSTOG00000012162) #18	ENSSTOG00000012166	LNX1 (ENSSTOG00000012178) #20	CHIC2 (ENSSTOG00000023668) #21	GSX2 (ENSSTOG00000023286) #22	PDGFRA (ENSSTOG00000011314) #23	KIT (ENSSTOG00000000752) #24	KDR (ENSSTOG00000016171) #25	SRD5A3 (ENSSTOG00000016177) #26	TMEM165 (ENSSTOG00000025897) #27	CLOCK (ENSSTOG00000016179) #28	PDCL2 (ENSSTOG00000006124) #29	NMU (ENSSTOG00000006143) #30	ENSSTOG00000033766	EXOC1L (ENSSTOG00000010455) #31	EXOC1 (ENSSTOG00000023883) #32	CEP135 (ENSSTOG00000000223) #33	ENSSTOG00000032240	ENSSTOG00000028370	AASDH (ENSSTOG00000007226) #35
Alpin marmot	MODERN SPECIES	9	OCIAD2 (ENSMMMG00000019984)	CWH43 (ENSMMMG00000019997)	DCUN1D4 (ENSMMMG00000020029)	LRRC66 (ENSMMMG00000020043)	SGCB (ENSMMMG00000020055)	ENSMMMG00000020059	ENSMMMG00000020060	USP46 (ENSMMMG00000020069)	ENSMMMG00000020086	ENSMMMG00000020094	RASL11B (ENSMMMG00000020096)	SCFD2 (ENSMMMG00000020102) #18	ENSMMMG00000020140	LNX1 (ENSMMMG00000020305) #20	CHIC2 (ENSMMMG00000020457) #21	GSX2 (ENSMMMG00000020460) #22	PDGFRA (ENSMMMG00000020466) #23	KIT (ENSMMMG00000020518) #24	KDR (ENSMMMG00000020555) #25	SRD5A3 (ENSMMMG00000020584) #26	TMEM165 (ENSMMMG00000020591) #27	CLOCK (ENSMMMG00000020601) #28	PDCL2 (ENSMMMG00000020666) #29	NMU (ENSMMMG00000020691) #30	EXOC1L (ENSMMMG00000020698) #31	EXOC1 (ENSMMMG00000020709) #32	ENSMMMG00000020762 #33	CRACD (ENSMMMG00000020998) #34	AASDH (ENSMMMG00000021120) #35	ENSMMMG00000021205 #36	ENSMMMG00000021211
Eurasian red squirrel	MODERN SPECIES	18	OCIAD1 (ENSSVLG00005023852)	OCIAD2 (ENSSVLG00005023758)	CWH43 (ENSSVLG00005023619)	ENSSVLG00005023431	LRRC66 (ENSSVLG00005023343)	SGCB (ENSSVLG00005023300)	SPATA18 (ENSSVLG00005023119)	USP46 (ENSSVLG00005022950)	ENSSVLG00005022878	RASL11B (ENSSVLG00005022855)	SCFD2 (ENSSVLG00005022776) #18	FIP1L1 (ENSSVLG00005022448) #19	LNX1 (ENSSVLG00005022254) #20	ENSSVLG00005022179	CHIC2 (ENSSVLG00005022117) #21	GSX2 (ENSSVLG00005022055) #22	PDGFRA (ENSSVLG00005022004) #23	KIT (ENSSVLG00005021747) #24	KDR (ENSSVLG00005021516) #25	SRD5A3 (ENSSVLG00005021472) #26	TMEM165 (ENSSVLG00005021425) #27	CLOCK (ENSSVLG00005021388) #28	PDCL2 (ENSSVLG00005021329) #29	NMU (ENSSVLG00005020969) #30	EXOC1L (ENSSVLG00005020891) #31	ENSSVLG00005020590 #32	ENSSVLG00005020514 #33	CRACD (ENSSVLG00005020021) #34	AASDH (ENSSVLG00005019805) #35	ENSSVLG00005019738	PPAT (ENSSVLG00005019646) #36
Hystricomorpha	ANCESTRAL SPECIES	26	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000008110	ENSGT00390000013532.i	ENSGT00390000013532.j	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT01030000238073	ENSGT00940000165267	ENSGT00940000161471 #34	ENSGT00440000033811 #35
Naked mole-rat female	MODERN SPECIES	1	ENSHGLG00000031874	ENSHGLG00000017366	ENSHGLG00000040271	ENSHGLG00000038499	SPATA18 (ENSHGLG00000040259)	ENSHGLG00000015649	USP46 (ENSHGLG00000018346)	ENSHGLG00000048480	RASL11B (ENSHGLG00000018686)	ENSHGLG00000035001	SCFD2 (ENSHGLG00000008861) #18	FIP1L1 (ENSHGLG00000018937)	LNX1 (ENSHGLG00000017095) #20	ENSHGLG00000037646	CHIC2 (ENSHGLG00000016294) #21	GSX2 (ENSHGLG00000016176) #22	PDGFRA (ENSHGLG00000007320) #23	KIT (ENSHGLG00000006129) #24	KDR (ENSHGLG00000011062) #25	SRD5A3 (ENSHGLG00000006595) #26	TMEM165 (ENSHGLG00000018297) #27	ENSHGLG00000017032	CLOCK (ENSHGLG00000016989) #28	PDCL2 (ENSHGLG00000008374) #29	NMU (ENSHGLG00000006706) #30	EXOC1L (ENSHGLG00000018199) #31	EXOC1 (ENSHGLG00000016475) #32	CEP135 (ENSHGLG00000015882) #33	ENSHGLG00000044551	CRACD (ENSHGLG00000016718) #34	AASDH (ENSHGLG00000015134) #35
Hystricomorpha_a	ANCESTRAL SPECIES	23	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000008110	ENSGT00390000013532.i	ENSGT00390000013532.j	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT01030000238073	ENSGT00940000165267	ENSGT00440000033811 #35	ENSGT00390000003428 #36
Hystricomorpha_b	ANCESTRAL SPECIES	76	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000008110	ENSGT00390000013532.i	ENSGT00390000013532.j	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000165267	ENSGT00440000033811 #35	ENSGT00390000003428 #36	ENSGT00390000010172 #37
Degu	MODERN SPECIES	60	ENSODEG00000009441	ENSODEG00000019795	ENSODEG00000008705	USP46 (ENSODEG00000009787)	RASL11B (ENSODEG00000010294)	SCFD2 (ENSODEG00000010104) #18	ENSODEG00000008819	ENSODEG00000019669	ENSODEG00000009001	LNX1 (ENSODEG00000010836) #20	ENSODEG00000008823	ENSODEG00000008952	ENSODEG00000009055	ENSODEG00000019624	CHIC2 (ENSODEG00000009727) #21	GSX2 (ENSODEG00000009015) #22	PDGFRA (ENSODEG00000009544) #23	ENSODEG00000011811	KIT (ENSODEG00000012738) #24	KDR (ENSODEG00000009430) #25	ENSODEG00000012100	SRD5A3 (ENSODEG00000009796) #26	TMEM165 (ENSODEG00000009162) #27	CLOCK (ENSODEG00000009397) #28	PDCL2 (ENSODEG00000009736) #29	NMU (ENSODEG00000010066) #30	EXOC1L (ENSODEG00000011413) #31	EXOC1 (ENSODEG00000010280) #32	CEP135 (ENSODEG00000010808) #33	ENSODEG00000010954	AASDH (ENSODEG00000011546) #35
Guinea pig	DUPLICATION
Guinea pig	MODERN SPECIES	6	MTMR6 (ENSCPOG00000007270)	NUP58 (ENSCPOG00000012295)	ATP8A2 (ENSCPOG00000032003)	SHISA2 (ENSCPOG00000009049)	RNF6 (ENSCPOG00000009120)	CDK8 (ENSCPOG00000040435)	WASF3 (ENSCPOG00000010156)	ENSCPOG00000020112	USP12 (ENSCPOG00000005241)	ENSCPOG00000008784	RASL11A (ENSCPOG00000031264)	GTF3A (ENSCPOG00000010143)	MTIF3 (ENSCPOG00000010148)	LNX2 (ENSCPOG00000010152)	ENSCPOG00000033461	ENSCPOG00000026854 #22	PDX1 (ENSCPOG00000024534)	CDX2 (ENSCPOG00000007276)	FLT3 (ENSCPOG00000007285)	PAN3 (ENSCPOG00000013349)	FLT1 (ENSCPOG00000013357)	POMP (ENSCPOG00000001710)	SLC46A3 (ENSCPOG00000015460)	ENSCPOG00000005581	SLC7A1 (ENSCPOG00000005590)	UBL3 (ENSCPOG00000036242)	KATNAL1 (ENSCPOG00000000804)	HMGB1 (ENSCPOG00000031835)	USPL1 (ENSCPOG00000009937)	ALOX5AP (ENSCPOG00000032690)	MEDAG (ENSCPOG00000003921)
Guinea pig	MODERN SPECIES	24	SLAIN2 (ENSCPOG00000002806)	SLC10A4 (ENSCPOG00000009644)	FRYL (ENSCPOG00000009647)	OCIAD1 (ENSCPOG00000011863)	ENSCPOG00000019887	CWH43 (ENSCPOG00000014177)	DCUN1D4 (ENSCPOG00000008945)	SGCB (ENSCPOG00000030752)	ENSCPOG00000011469	USP46 (ENSCPOG00000007660)	RASL11B (ENSCPOG00000010760)	SCFD2 (ENSCPOG00000039431) #18	ENSCPOG00000010770	LNX1 (ENSCPOG00000010775) #20	CHIC2 (ENSCPOG00000040036) #21	GSX2 (ENSCPOG00000005837) #22	PDGFRA (ENSCPOG00000011782) #23	KIT (ENSCPOG00000011411) #24	KDR (ENSCPOG00000010001) #25	SRD5A3 (ENSCPOG00000011801) #26	TMEM165 (ENSCPOG00000011803) #27	CLOCK (ENSCPOG00000011807) #28	PDCL2 (ENSCPOG00000036525) #29	NMU (ENSCPOG00000009016) #30	EXOC1L (ENSCPOG00000040720) #31	EXOC1 (ENSCPOG00000003208) #32	CEP135 (ENSCPOG00000003212) #33	ENSCPOG00000000214	ENSCPOG00000040605	AASDH (ENSCPOG00000000215) #35	PPAT (ENSCPOG00000000216) #36
Laurasiatheria	ANCESTRAL SPECIES	11	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Artiodactyla	ANCESTRAL SPECIES	12	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Suina	ANCESTRAL SPECIES	33	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00730000111450.g.a	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26
Pig	MODERN SPECIES	16	FRYL (ENSSSCG00000008826)	OCIAD1 (ENSSSCG00000058121)	OCIAD2 (ENSSSCG00000008829)	CWH43 (ENSSSCG00000008830)	DCUN1D4 (ENSSSCG00000008831)	ENSSSCG00000008832	SGCB (ENSSSCG00000058015)	SPATA18 (ENSSSCG00000008834)	USP46 (ENSSSCG00000036284)	ENSSSCG00000021623	RASL11B (ENSSSCG00000008835)	SCFD2 (ENSSSCG00000008836) #18	ENSSSCG00000031636	LNX1 (ENSSSCG00000008838) #20	CHIC2 (ENSSSCG00000032645) #21	GSX2 (ENSSSCG00000008840) #22	PDGFRA (ENSSSCG00000008841) #23	KIT (ENSSSCG00000008842) #24	KDR (ENSSSCG00000008844) #25	ENSSSCG00000008845 #26	ENSSSCG00000034355	ENSSSCG00000053955	ENSSSCG00000008850	ENSSSCG00000008892	ENSSSCG00000057119	ENSSSCG00000061357	ENSSSCG00000036417	ENSSSCG00000042370	ENSSSCG00000043541	MAP9 (ENSSSCG00000008852)	TLL1 (ENSSSCG00000008853)
Chacoan peccary	MODERN SPECIES	960	FRYL (ENSCWAG00000020707)	OCIAD1 (ENSCWAG00000011906)	OCIAD2 (ENSCWAG00000012190)	CWH43 (ENSCWAG00000012257)	DCUN1D4 (ENSCWAG00000012514)	LRRC66 (ENSCWAG00000012693)	SGCB (ENSCWAG00000012789)	SPATA18 (ENSCWAG00000012879)	USP46 (ENSCWAG00000013332)	ENSCWAG00000013604	RASL11B (ENSCWAG00000013658)	SCFD2 (ENSCWAG00000013750) #18	FIP1L1 (ENSCWAG00000013864) #19	LNX1 (ENSCWAG00000014427) #20	CHIC2 (ENSCWAG00000014605) #21	GSX2 (ENSCWAG00000014666) #22	PDGFRA (ENSCWAG00000014703) #23	KIT (ENSCWAG00000014775) #24	KDR (ENSCWAG00000015114) #25	SRD5A3 (ENSCWAG00000015352) #26	ENSCWAG00000015393
Artiodactyla_a	ANCESTRAL SPECIES	12	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Artiodactyla_b	ANCESTRAL SPECIES	16	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00960000190735	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Pecora	ANCESTRAL SPECIES	15	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00960000190735	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461	ENSGT00390000003428 #36
Yarkand deer	MODERN SPECIES	29	ENSCHYG00000010611	ENSCHYG00000010837	OCIAD2 (ENSCHYG00000010863)	ENSCHYG00000010946	CWH43 (ENSCHYG00000011014)	ENSCHYG00000011256	LRRC66 (ENSCHYG00000011643)	SGCB (ENSCHYG00000011679)	SPATA18 (ENSCHYG00000011770)	USP46 (ENSCHYG00000011853)	ENSCHYG00000012033	SCFD2 (ENSCHYG00000012125) #18	ENSCHYG00000012400	LNX1 (ENSCHYG00000013037) #20	CHIC2 (ENSCHYG00000013311) #21	GSX2 (ENSCHYG00000013391) #22	PDGFRA (ENSCHYG00000013443) #23	KIT (ENSCHYG00000013749) #24	KDR (ENSCHYG00000014384) #25	ENSCHYG00000014804	SRD5A3 (ENSCHYG00000014865) #26	TMEM165 (ENSCHYG00000014938) #27	CLOCK (ENSCHYG00000015094) #28	ENSCHYG00000015403	PDCL2 (ENSCHYG00000015434) #29	NMU (ENSCHYG00000015577) #30	EXOC1L (ENSCHYG00000015920) #31	EXOC1 (ENSCHYG00000016173) #32	CEP135 (ENSCHYG00000016897) #33	ENSCHYG00000017453	CRACD (ENSCHYG00000017500) #34
Percora_a	ANCESTRAL SPECIES	18	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00960000190735	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00960000187690	ENSGT00940000168854	ENSGT00940000161471 #34	ENSGT00440000033811 #35
Bovidae	ANCESTRAL SPECIES	18	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00960000190735	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00960000187690	ENSGT00940000168854	ENSGT00940000161471 #34	ENSGT00440000033811 #35
Caprinae	ANCESTRAL SPECIES	13	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00910000147676	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453.d #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36	ENSGT00390000010172.z #37
Goat	MODERN SPECIES	25	OCIAD1 (ENSCHIG00000024339)	OCIAD2 (ENSCHIG00000016581)	CWH43 (ENSCHIG00000011196)	DCUN1D4 (ENSCHIG00000024006)	SGCB (ENSCHIG00000025818)	SPATA18 (ENSCHIG00000019427)	ENSCHIG00000008028	ENSCHIG00000015328	ENSCHIG00000025743	USP46 (ENSCHIG00000019211)	RASL11B (ENSCHIG00000024365)	SCFD2 (ENSCHIG00000015721) #18	ENSCHIG00000025903	LNX1 (ENSCHIG00000017890) #20	CHIC2 (ENSCHIG00000002107) #21	GSX2 (ENSCHIG00000017735) #22	PDGFRA (ENSCHIG00000005194) #23	KIT (ENSCHIG00000022287) #24	ENSCHIG00000007998	KDR (ENSCHIG00000006477) #25	SRD5A3 (ENSCHIG00000019579) #26	TMEM165 (ENSCHIG00000026960) #27	CLOCK (ENSCHIG00000017027) #28	PDCL2 (ENSCHIG00000025455) #29	NMU (ENSCHIG00000012702) #30	ENSCHIG00000021229	EXOC1L (ENSCHIG00000009195) #31	EXOC1 (ENSCHIG00000022016) #32	ENSCHIG00000009115	CEP135 (ENSCHIG00000020429) #33	CRACD (ENSCHIG00000010537) #34
Rambouillet Sheep	MODERN SPECIES	22	SLAIN2 (ENSOARG00020009674)	SLC10A4 (ENSOARG00020009737)	ZAR1 (ENSOARG00020009774)	FRYL (ENSOARG00020010236)	OCIAD1 (ENSOARG00020012036)	OCIAD2 (ENSOARG00020012338)	DCUN1D4 (ENSOARG00020012554)	LRRC66 (ENSOARG00020012901)	SGCB (ENSOARG00020012938)	SPATA18 (ENSOARG00020013016)	ENSOARG00020013200	USP46 (ENSOARG00020013318)	SCFD2 (ENSOARG00020013824) #18	LNX1 (ENSOARG00020014691) #20	CHIC2 (ENSOARG00020014893) #21	GSX2 (ENSOARG00020014973) #22	ENSOARG00020015027 #33	PDGFRA (ENSOARG00020015079) #23	ENSOARG00020015240	KIT (ENSOARG00020015287) #24	KDR (ENSOARG00020015634) #25	SRD5A3 (ENSOARG00020016453) #26	TMEM165 (ENSOARG00020016524) #27	CLOCK (ENSOARG00020016714) #28	PDCL2 (ENSOARG00020017078) #29	NMU (ENSOARG00020017194) #30	ENSOARG00020017902	EXOC1L (ENSOARG00020017950) #31	EXOC1 (ENSOARG00020018015) #32	ENSOARG00020018714	CEP135 (ENSOARG00020018779) #33
Bovinae	ANCESTRAL SPECIES	15	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00960000190735	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00960000187690	ENSGT00940000168854	ENSGT00940000161471 #34	ENSGT00440000033811 #35
Bos	ANCESTRAL SPECIES	15	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00960000190735	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461	ENSGT00390000003428 #36
Bos_b	ANCESTRAL SPECIES	14	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000154598.ac.b	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00940000154694.`b	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36
Hybrid Bos Indicus	MODERN SPECIES	25	ENSBIXG00005010068	LRRC66 (ENSBIXG00005010057)	SGCB (ENSBIXG00005010046)	SPATA18 (ENSBIXG00005010019)	ENSBIXG00005000725	USP46 (ENSBIXG00005009949)	ENSBIXG00005009914	ENSBIXG00005009892	RASL11B (ENSBIXG00005000664)	SCFD2 (ENSBIXG00005000644) #18	ENSBIXG00005009835	ENSBIXG00005009810	LNX1 (ENSBIXG00005009701) #20	ENSBIXG00005009618	CHIC2 (ENSBIXG00005009594) #21	GSX2 (ENSBIXG00005009557) #22	ENSBIXG00005009536	PDGFRA (ENSBIXG00005009519) #23	KIT (ENSBIXG00005009446) #24	KDR (ENSBIXG00005009386) #25	SRD5A3 (ENSBIXG00005009359) #26	TMEM165 (ENSBIXG00005000487) #27	CLOCK (ENSBIXG00005009314) #28	ENSBIXG00005006706	PDCL2 (ENSBIXG00005000440) #29	ENSBIXG00005009252	NMU (ENSBIXG00005009233) #30	EXOC1L (ENSBIXG00005009164) #31	ENSBIXG00005000404	EXOC1 (ENSBIXG00005009097) #32	CEP135 (ENSBIXG00005008904) #33
Cow	MODERN SPECIES	25	FRYL (ENSBTAG00000000137)	OCIAD1 (ENSBTAG00000010611)	OCIAD2 (ENSBTAG00000001839)	CWH43 (ENSBTAG00000021347)	DCUN1D4 (ENSBTAG00000001600)	LRRC66 (ENSBTAG00000014599)	SGCB (ENSBTAG00000014601)	SPATA18 (ENSBTAG00000018106)	ENSBTAG00000051171	USP46 (ENSBTAG00000003443)	RASL11B (ENSBTAG00000020647)	SCFD2 (ENSBTAG00000020648) #18	FIP1L1 (ENSBTAG00000020653)	LNX1 (ENSBTAG00000020658) #20	CHIC2 (ENSBTAG00000032660) #21	GSX2 (ENSBTAG00000045812) #22	PDGFRA (ENSBTAG00000007173) #23	KIT (ENSBTAG00000002699) #24	KDR (ENSBTAG00000000782) #25	SRD5A3 (ENSBTAG00000014913) #26	TMEM165 (ENSBTAG00000001269) #27	CLOCK (ENSBTAG00000044044) #28	PDCL2 (ENSBTAG00000001772) #29	ENSBTAG00000054466	NMU (ENSBTAG00000044161) #30	EXOC1L (ENSBTAG00000045602) #31	ENSBTAG00000022199	EXOC1 (ENSBTAG00000032637) #32	CEP135 (ENSBTAG00000009471) #33	CRACD (ENSBTAG00000040398) #34	AASDH (ENSBTAG00000020583) #35
Bos_a	ANCESTRAL SPECIES	21	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00960000190735	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461	ENSGT00390000003428 #36
Domestic yak	MODERN SPECIES	25	OCIAD1 (ENSBGRG00000000676)	OCIAD2 (ENSBGRG00000000633)	CWH43 (ENSBGRG00000000567)	ENSBGRG00000000459	ENSBGRG00000000436	LRRC66 (ENSBGRG00000000416)	SGCB (ENSBGRG00000000392)	SPATA18 (ENSBGRG00000000356)	ENSBGRG00000025365	USP46 (ENSBGRG00000025311)	RASL11B (ENSBGRG00000025282)	SCFD2 (ENSBGRG00000025260) #18	ENSBGRG00000024926	LNX1 (ENSBGRG00000024797) #20	CHIC2 (ENSBGRG00000024725) #21	GSX2 (ENSBGRG00000024694) #22	PDGFRA (ENSBGRG00000024258) #23	ENSBGRG00000024188	KIT (ENSBGRG00000023915) #24	KDR (ENSBGRG00000023842) #25	SRD5A3 (ENSBGRG00000023773) #26	TMEM165 (ENSBGRG00000023695) #27	ENSBGRG00000023674	CLOCK (ENSBGRG00000023603) #28	ENSBGRG00000023580	PDCL2 (ENSBGRG00000023560) #29	NMU (ENSBGRG00000023379) #30	ENSBGRG00000023358	EXOC1L (ENSBGRG00000023320) #31	ENSBGRG00000023272	EXOC1 (ENSBGRG00000023083) #32
Wild yak	MODERN SPECIES	2120															CHIC2 (ENSBMUG00000015441) #21	GSX2 (ENSBMUG00000015399) #22	PDGFRA (ENSBMUG00000015377) #23
American bison	MODERN SPECIES	3318							LRRC66 (ENSBBBG00000019144)	SGCB (ENSBBBG00000004927)	SPATA18 (ENSBBBG00000008168)	USP46 (ENSBBBG00000004938)	RASL11B (ENSBBBG00000019189)	SCFD2 (ENSBBBG00000019210) #18	FIP1L1 (ENSBBBG00000005000) #19	LNX1 (ENSBBBG00000008518) #20	CHIC2 (ENSBBBG00000005062) #21	GSX2 (ENSBBBG00000019352) #22	PDGFRA (ENSBBBG00000019371) #23	KIT (ENSBBBG00000009185) #24	KDR (ENSBBBG00000005252) #25	SRD5A3 (ENSBBBG00000019492) #26	TMEM165 (ENSBBBG00000005203) #27	CLOCK (ENSBBBG00000005300) #28	PDCL2 (ENSBBBG00000019569) #29	NMU (ENSBBBG00000005197) #30	EXOC1L (ENSBBBG00000019666) #31	EXOC1 (ENSBBBG00000019735) #32	CEP135 (ENSBBBG00000019772) #33	ENSBBBG00000019782	ENSBBBG00000005358	AASDH (ENSBBBG00000005384) #35	ENSBBBG00000019902
Siberian musk deer	MODERN SPECIES	1266	FRYL (ENSMMSG00000022278)	ENSMMSG00000022145	OCIAD2 (ENSMMSG00000022117)	CWH43 (ENSMMSG00000022043)	ENSMMSG00000021970	LRRC66 (ENSMMSG00000021932)	SGCB (ENSMMSG00000021920)	SPATA18 (ENSMMSG00000021782)	USP46 (ENSMMSG00000021696)	RASL11B (ENSMMSG00000021670)	SCFD2 (ENSMMSG00000021640) #18	ENSMMSG00000021486	LNX1 (ENSMMSG00000021431) #20	ENSMMSG00000021416	CHIC2 (ENSMMSG00000021379) #21	GSX2 (ENSMMSG00000021348) #22	ENSMMSG00000021324	PDGFRA (ENSMMSG00000021277) #23	KIT (ENSMMSG00000021225) #24	KDR (ENSMMSG00000021120) #25	ENSMMSG00000021085	SRD5A3 (ENSMMSG00000021061) #26	TMEM165 (ENSMMSG00000021016) #27	CLOCK (ENSMMSG00000020910) #28	PDCL2 (ENSMMSG00000024349) #29	NMU (ENSMMSG00000024331) #30	EXOC1L (ENSMMSG00000024327) #31	EXOC1 (ENSMMSG00000024323) #32	CEP135 (ENSMMSG00000024320) #33	ENSMMSG00000024317	ENSMMSG00000024316
Cetacea	ANCESTRAL SPECIES	12	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00960000190735	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Odontoceti	ANCESTRAL SPECIES	11	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00960000190735	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039.a.a	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00440000038159.qb	ENSGT00940000161471 #34	ENSGT00440000033811 #35
Odontoceti_a	ANCESTRAL SPECIES	23	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00960000190735	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039.a.a	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00440000038159.qb	ENSGT00940000161471 #34	ENSGT00440000033811 #35
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00960000190735	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920.g #26	ENSGT00390000005261 #27	ENSGT00910000148039.a.a	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00440000038159.qb	ENSGT00940000161471 #34	ENSGT00440000033811 #35
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00960000190735	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920.g #26	ENSGT00390000005261 #27	ENSGT00910000148039.a.a	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00440000038159.qb	ENSGT00940000161471 #34	ENSGT00440000033811 #35
Beluga whale	MODERN SPECIES	77	OCIAD1 (ENSDLEG00000008014)	ENSDLEG00000007996	OCIAD2 (ENSDLEG00000007977)	DCUN1D4 (ENSDLEG00000007941)	LRRC66 (ENSDLEG00000015035)	SGCB (ENSDLEG00000015019)	ENSDLEG00000015009	ENSDLEG00000014987	ENSDLEG00000014974	USP46 (ENSDLEG00000014941)	RASL11B (ENSDLEG00000014914)	SCFD2 (ENSDLEG00000014865) #18	FIP1L1 (ENSDLEG00000014828)	LNX1 (ENSDLEG00000014802) #20	CHIC2 (ENSDLEG00000014791) #21	GSX2 (ENSDLEG00000014788) #22	PDGFRA (ENSDLEG00000014750) #23	KIT (ENSDLEG00000014712) #24	KDR (ENSDLEG00000014628) #25	ENSDLEG00000014576 #26	TMEM165 (ENSDLEG00000014557) #27	ENSDLEG00000014547	CLOCK (ENSDLEG00000014479) #28	PDCL2 (ENSDLEG00000014453) #29	EXOC1L (ENSDLEG00000014446) #31	EXOC1 (ENSDLEG00000014416) #32	CEP135 (ENSDLEG00000014370) #33	KIAA1211 (ENSDLEG00000014302) #34	AASDH (ENSDLEG00000014259) #35	ENSDLEG00000014169 #36	ENSDLEG00000014072 #37
Narwhal	MODERN SPECIES	307	FRYL (ENSMMNG00015013775)	OCIAD1 (ENSMMNG00015013714)	OCIAD2 (ENSMMNG00015013680)	CWH43 (ENSMMNG00015013652)	DCUN1D4 (ENSMMNG00015013609)	LRRC66 (ENSMMNG00015013581)	SGCB (ENSMMNG00015013564)	SPATA18 (ENSMMNG00015013524)	ENSMMNG00015013502	USP46 (ENSMMNG00015013470)	RASL11B (ENSMMNG00015013438)	SCFD2 (ENSMMNG00015013410) #18	ENSMMNG00015013310	LNX1 (ENSMMNG00015013246) #20	CHIC2 (ENSMMNG00015013218) #21	GSX2 (ENSMMNG00015013194) #22	PDGFRA (ENSMMNG00015013167) #23	KIT (ENSMMNG00015013144) #24	KDR (ENSMMNG00015013066) #25	ENSMMNG00015013038 #26	TMEM165 (ENSMMNG00015013015) #27	CLOCK (ENSMMNG00015012990) #28	PDCL2 (ENSMMNG00015012976) #29	NMU (ENSMMNG00015012920) #30	EXOC1L (ENSMMNG00015012879) #31	EXOC1 (ENSMMNG00015012800) #32	CEP135 (ENSMMNG00015012654) #33	ENSMMNG00015012615	CRACD (ENSMMNG00015012549) #34	AASDH (ENSMMNG00015012429) #35	ENSMMNG00015012406
Vaquita	MODERN SPECIES	16	ZAR1 (ENSPSNG00000004263)	FRYL (ENSPSNG00000004311)	OCIAD1 (ENSPSNG00000004449)	OCIAD2 (ENSPSNG00000004549)	CWH43 (ENSPSNG00000004578)	DCUN1D4 (ENSPSNG00000004664)	LRRC66 (ENSPSNG00000004722)	SGCB (ENSPSNG00000004745)	SPATA18 (ENSPSNG00000004807)	USP46 (ENSPSNG00000004926)	RASL11B (ENSPSNG00000005019)	SCFD2 (ENSPSNG00000005058) #18	FIP1L1 (ENSPSNG00000005133) #19	LNX1 (ENSPSNG00000005217) #20	CHIC2 (ENSPSNG00000000109) #21	GSX2 (ENSPSNG00000000136) #22	PDGFRA (ENSPSNG00000000217) #23	KIT (ENSPSNG00000000276) #24	KDR (ENSPSNG00000000325) #25	ENSPSNG00000000366 #26	TMEM165 (ENSPSNG00000000395) #27	ENSPSNG00000000412	CLOCK (ENSPSNG00000000466) #28	PDCL2 (ENSPSNG00000000496) #29	NMU (ENSPSNG00000000572) #30	EXOC1L (ENSPSNG00000000657) #31	EXOC1 (ENSPSNG00000000713) #32	CEP135 (ENSPSNG00000000783) #33	ENSPSNG00000000807	CRACD (ENSPSNG00000000906) #34	AASDH (ENSPSNG00000001136) #35
Dolphin	MODERN SPECIES	5269															CHIC2 (ENSTTRG00000011486) #21	GSX2 (ENSTTRG00000011491) #22
Sperm whale	MODERN SPECIES	18	FRYL (ENSPCTG00005006911)	OCIAD1 (ENSPCTG00005006672)	OCIAD2 (ENSPCTG00005006614)	CWH43 (ENSPCTG00005006527)	ENSPCTG00005006507	DCUN1D4 (ENSPCTG00005006440)	LRRC66 (ENSPCTG00005006377)	SGCB (ENSPCTG00005006339)	SPATA18 (ENSPCTG00005006266)	USP46 (ENSPCTG00005006091)	RASL11B (ENSPCTG00005006028)	SCFD2 (ENSPCTG00005005926) #18	FIP1L1 (ENSPCTG00005005849) #19	LNX1 (ENSPCTG00005005759) #20	CHIC2 (ENSPCTG00005005704) #21	GSX2 (ENSPCTG00005005685) #22	PDGFRA (ENSPCTG00005005611) #23	ENSPCTG00005005580	KIT (ENSPCTG00005005506) #24	KDR (ENSPCTG00005005473) #25	SRD5A3 (ENSPCTG00005005446) #26	TMEM165 (ENSPCTG00005005392) #27	ENSPCTG00005005382	CLOCK (ENSPCTG00005005343) #28	PDCL2 (ENSPCTG00005005309) #29	NMU (ENSPCTG00005005187) #30	EXOC1L (ENSPCTG00005005136) #31	EXOC1 (ENSPCTG00005004932) #32	CEP135 (ENSPCTG00005004883) #33	ENSPCTG00005004860	CRACD (ENSPCTG00005004658) #34
Blue whale	MODERN SPECIES	16	ZAR1 (ENSBMSG00010002777)	FRYL (ENSBMSG00010002631)	ENSBMSG00010002543	OCIAD2 (ENSBMSG00010002503)	CWH43 (ENSBMSG00010002456)	DCUN1D4 (ENSBMSG00010002390)	LRRC66 (ENSBMSG00010002339)	SGCB (ENSBMSG00010002296)	SPATA18 (ENSBMSG00010002257)	ENSBMSG00010002177	RASL11B (ENSBMSG00010002125)	SCFD2 (ENSBMSG00010002107) #18	FIP1L1 (ENSBMSG00010002026) #19	LNX1 (ENSBMSG00010001954) #20	CHIC2 (ENSBMSG00010001906) #21	GSX2 (ENSBMSG00010001890) #22	PDGFRA (ENSBMSG00010001797) #23	KIT (ENSBMSG00010001699) #24	KDR (ENSBMSG00010001647) #25	SRD5A3 (ENSBMSG00010001627) #26	TMEM165 (ENSBMSG00010001577) #27	CLOCK (ENSBMSG00010001545) #28	PDCL2 (ENSBMSG00010001519) #29	NMU (ENSBMSG00010001314) #30	EXOC1L (ENSBMSG00010001265) #31	EXOC1 (ENSBMSG00010001230) #32	CEP135 (ENSBMSG00010001197) #33	CRACD (ENSBMSG00010000579) #34	AASDH (ENSBMSG00010000413) #35	ENSBMSG00010000372	PPAT (ENSBMSG00010000340) #36
Camelidae	ANCESTRAL SPECIES	22	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Arabian camel	MODERN SPECIES	11	ZAR1 (ENSCDRG00005002960)	FRYL (ENSCDRG00005002927)	OCIAD1 (ENSCDRG00005002829)	OCIAD2 (ENSCDRG00005002794)	CWH43 (ENSCDRG00005002773)	DCUN1D4 (ENSCDRG00005002732)	LRRC66 (ENSCDRG00005002703)	SGCB (ENSCDRG00005002679)	SPATA18 (ENSCDRG00005002631)	USP46 (ENSCDRG00005002550)	RASL11B (ENSCDRG00005002505)	SCFD2 (ENSCDRG00005002450) #18	ENSCDRG00005002298	LNX1 (ENSCDRG00005002225) #20	CHIC2 (ENSCDRG00005002192) #21	ENSCDRG00005002178 #22	PDGFRA (ENSCDRG00005002143) #23	KIT (ENSCDRG00005002100) #24	KDR (ENSCDRG00005002066) #25	SRD5A3 (ENSCDRG00005002056) #26	TMEM165 (ENSCDRG00005002040) #27	ENSCDRG00005002035	CLOCK (ENSCDRG00005002007) #28	PDCL2 (ENSCDRG00005001989) #29	NMU (ENSCDRG00005001974) #30	EXOC1L (ENSCDRG00005001951) #31	EXOC1 (ENSCDRG00005001838) #32	CEP135 (ENSCDRG00005001801) #33	ENSCDRG00005001601	AASDH (ENSCDRG00005001547) #35	ENSCDRG00005001539
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Carnivora	ANCESTRAL SPECIES	5	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Caniformia	ANCESTRAL SPECIES	7	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b.o	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461	ENSGT00390000003428 #36
Ursidae	ANCESTRAL SPECIES	29	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b.o	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461	ENSGT00390000003428 #36
Ursus	ANCESTRAL SPECIES	51	ENSGT00610000086058.a	ENSGT00390000017515.o.a.m.b.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b.o	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461	ENSGT00390000003428 #36
American black bear	MODERN SPECIES	473															CHIC2 (ENSUAMG00000014959) #21	GSX2 (ENSUAMG00000014953) #22	PDGFRA (ENSUAMG00000014949) #23	KIT (ENSUAMG00000014061) #24
Giant Panda	MODERN SPECIES	2	FRYL (ENSAMEG00000002926)	OCIAD1 (ENSAMEG00000008239)	OCIAD2 (ENSAMEG00000008236)	CWH43 (ENSAMEG00000008221)	DCUN1D4 (ENSAMEG00000008209)	ENSAMEG00000026090	SGCB (ENSAMEG00000008182)	SPATA18 (ENSAMEG00000008174)	ENSAMEG00000008131	RASL11B (ENSAMEG00000008116)	SCFD2 (ENSAMEG00000008113) #18	ENSAMEG00000029850	ENSAMEG00000008072	LNX1 (ENSAMEG00000008041) #20	CHIC2 (ENSAMEG00000018348) #21	GSX2 (ENSAMEG00000025732) #22	PDGFRA (ENSAMEG00000018351) #23	KIT (ENSAMEG00000018372) #24	KDR (ENSAMEG00000018407) #25	SRD5A3 (ENSAMEG00000031461) #26	TMEM165 (ENSAMEG00000018419) #27	CLOCK (ENSAMEG00000018420) #28	PDCL2 (ENSAMEG00000018422) #29	NMU (ENSAMEG00000018424) #30	EXOC1L (ENSAMEG00000008259) #31	EXOC1 (ENSAMEG00000008260) #32	CEP135 (ENSAMEG00000008299) #33	CRACD (ENSAMEG00000008359) #34	AASDH (ENSAMEG00000008375) #35	ENSAMEG00000020262	PPAT (ENSAMEG00000008404) #36
Mustelinae	ANCESTRAL SPECIES	63	ENSGT00950000182808.a.a.b.b	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b.o	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461	ENSGT00390000003428 #36
American mink	MODERN SPECIES	36	ENSNVIG00000013101	FRYL (ENSNVIG00000013110)	ENSNVIG00000013401	OCAD2 (ENSNVIG00000013479)	CWH43 (ENSNVIG00000013526)	DCUN1D4 (ENSNVIG00000013585)	ENSNVIG00000013642	SGCB (ENSNVIG00000013663)	SPATA18 (ENSNVIG00000013671)	ENSNVIG00000013705	RASL11B (ENSNVIG00000013741)	SCFD2 (ENSNVIG00000013759) #18	ENSNVIG00000013777	LNX1 (ENSNVIG00000013941) #20	CHIC2 (ENSNVIG00000013967) #21	GSX2 (ENSNVIG00000013995) #22	PDGFRA (ENSNVIG00000014002) #23	KIT (ENSNVIG00000014054) #24	KDR (ENSNVIG00000014095) #25	SRD5A3 (ENSNVIG00000014170) #26	ENSNVIG00000014184 #27	ENSNVIG00000014196 #27	CLOCK (ENSNVIG00000014200) #28	PDCL2 (ENSNVIG00000014277) #29	NMU (ENSNVIG00000014304) #30	EXOC1L (ENSNVIG00000014460) #31	EXOC1 (ENSNVIG00000014472) #32	CEP135 (ENSNVIG00000014670) #33	CRACD (ENSNVIG00000014697) #34	AASDH (ENSNVIG00000014818) #35	PPAT (ENSNVIG00000014855) #36
Ferret	MODERN SPECIES	271	OCIAD2 (ENSMPUG00000005561)	CWH43 (ENSMPUG00000005574)	DCUN1D4 (ENSMPUG00000005586)	LRRC66 (ENSMPUG00000005685)	SGCB (ENSMPUG00000005697)	SPATA18 (ENSMPUG00000005704)	USP46 (ENSMPUG00000005768)	ENSMPUG00000005776	ENSMPUG00000005778	RASL11B (ENSMPUG00000005791)	ENSMPUG00000005794 #18	ENSMPUG00000005797 #18	ENSMPUG00000005800	LNX1 (ENSMPUG00000005806) #20	CHIC2 (ENSMPUG00000005811) #21	GSX2 (ENSMPUG00000005814) #22	PDGFRA (ENSMPUG00000005818) #23	KIT (ENSMPUG00000006114) #24
Canidae	ANCESTRAL SPECIES	51	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000154277.a.b.b	ENSGT00940000161471 #34	ENSGT00440000033811 #35
Canis_lupus	ANCESTRAL SPECIES	19	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36
Dog	MODERN SPECIES	4	ENSCAFG00845009950	FRYL (ENSCAFG00845010043)	OCIAD1 (ENSCAFG00845010354)	OCIAD2 (ENSCAFG00845010489)	CWH43 (ENSCAFG00845010559)	DCUN1D4 (ENSCAFG00845010697)	ENSCAFG00845010819	SGCB (ENSCAFG00845010845)	SPATA18 (ENSCAFG00845010886)	USP46 (ENSCAFG00845011008)	RASL11B (ENSCAFG00845011251)	SCFD2 (ENSCAFG00845011397) #18	FIP1L1 (ENSCAFG00845011572) #19	LNX1 (ENSCAFG00845011670) #20	CHIC2 (ENSCAFG00845011712) #21	GSX2 (ENSCAFG00845011743) #22	PDGFRA (ENSCAFG00845011775) #23	KIT (ENSCAFG00845011904) #24	KDR (ENSCAFG00845012083) #25	SRD5A3 (ENSCAFG00845012266) #26	TMEM165 (ENSCAFG00845012298) #27	CLOCK (ENSCAFG00845012371) #28	PDCL2 (ENSCAFG00845012470) #29	ENSCAFG00845012506 #30	EXOC1L (ENSCAFG00845012675) #31	EXOC1 (ENSCAFG00845012783) #32	CEP135 (ENSCAFG00845013097) #33	ENSCAFG00845013140	PAICS (ENSCAFG00845013190) #34	AASDH (ENSCAFG00845013462) #35	PPAT (ENSCAFG00845013561) #36
Dingo	MODERN SPECIES	2	SLC10A4 (ENSCAFG00020002371)	ENSCAFG00020002367	FRYL (ENSCAFG00020002092)	OCIAD1 (ENSCAFG00020002029)	OCIAD2 (ENSCAFG00020002015)	CWH43 (ENSCAFG00020001935)	DCUN1D4 (ENSCAFG00020001922)	SGCB (ENSCAFG00020001898)	SPATA18 (ENSCAFG00020001878)	USP46 (ENSCAFG00020001811)	RASL11B (ENSCAFG00020001800)	SCFD2 (ENSCAFG00020001766) #18	ENSCAFG00020001745	LNX1 (ENSCAFG00020001736) #20	CHIC2 (ENSCAFG00020001719) #21	GSX2 (ENSCAFG00020001709) #22	PDGFRA (ENSCAFG00020001700) #23	KIT (ENSCAFG00020001613) #24	KDR (ENSCAFG00020000430) #25	SRD5A3 (ENSCAFG00020000287) #26	TMEM165 (ENSCAFG00020000158) #27	ENSCAFG00020027547	CLOCK (ENSCAFG00020027545) #28	PDCL2 (ENSCAFG00020027543) #29	NMU (ENSCAFG00020027542) #30	EXOC1L (ENSCAFG00020027541) #31	EXOC1 (ENSCAFG00020027483) #32	CEP135 (ENSCAFG00020027412) #33	ENSCAFG00020027408	ENSCAFG00020027407	ENSCAFG00020027406
Felidae	ANCESTRAL SPECIES	4	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000154694.i.b	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Panthera	ANCESTRAL SPECIES	5	ENSGT00610000086058.a	ENSGT00390000017515.o.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000154694.i.b	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00610000086058.a	ENSGT00390000017515.o.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000154694.i.b	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36
leopard	MODERN SPECIES	2	ENSPPRG00000014463	OCIAD1 (ENSPPRG00000024770)	OCIAD2 (ENSPPRG00000024648)	ENSPPRG00000024611	CWH43 (ENSPPRG00000024574)	DCUN1D4 (ENSPPRG00000024436)	LRRC66 (ENSPPRG00000024319)	SGCB (ENSPPRG00000024271)	SPATA18 (ENSPPRG00000024100)	USP46 (ENSPPRG00000023778)	RASL11B (ENSPPRG00000023266)	SCFD2 (ENSPPRG00000000228) #18	FIP1L1 (ENSPPRG00000002221) #19	LNX1 (ENSPPRG00000003037) #20	CHIC2 (ENSPPRG00000003452) #21	GSX2 (ENSPPRG00000003871) #22	ENSPPRG00000003939	PDGFRA (ENSPPRG00000004078) #23	KIT (ENSPPRG00000004930) #24	KDR (ENSPPRG00000005424) #25	SRD5A3 (ENSPPRG00000005520) #26	TMEM165 (ENSPPRG00000005927) #27	CLOCK (ENSPPRG00000006916) #28	PDCL2 (ENSPPRG00000006963) #29	NMU (ENSPPRG00000007536) #30	EXOC1L (ENSPPRG00000007673) #31	ENSPPRG00000008233	EXOC1 (ENSPPRG00000008449) #32	CEP135 (ENSPPRG00000009012) #33	CRACD (ENSPPRG00000010895) #34	AASDH (ENSPPRG00000013116) #35
lion	MODERN SPECIES	4	OCIAD1 (ENSPLOG00000002821)	OCIAD2 (ENSPLOG00000002897)	ENSPLOG00000002924	CWH43 (ENSPLOG00000002953)	DCUN1D4 (ENSPLOG00000003028)	LRRC66 (ENSPLOG00000003082)	SGCB (ENSPLOG00000003110)	SPATA18 (ENSPLOG00000003154)	USP46 (ENSPLOG00000003281)	ENSPLOG00000003341	RASL11B (ENSPLOG00000003416)	SCFD2 (ENSPLOG00000003440) #18	FIP1L1 (ENSPLOG00000003542) #19	LNX1 (ENSPLOG00000003661) #20	CHIC2 (ENSPLOG00000003696) #21	GSX2 (ENSPLOG00000003713) #22	PDGFRA (ENSPLOG00000003742) #23	ENSPLOG00000003776	KIT (ENSPLOG00000003794) #24	KDR (ENSPLOG00000003825) #25	SRD5A3 (ENSPLOG00000003868) #26	TMEM165 (ENSPLOG00000003883) #27	CLOCK (ENSPLOG00000003907) #28	PDCL2 (ENSPLOG00000003923) #29	NMU (ENSPLOG00000003965) #30	EXOC1L (ENSPLOG00000004058) #31	EXOC1 (ENSPLOG00000004076) #32	CEP135 (ENSPLOG00000004109) #33	CRACD (ENSPLOG00000004162) #34	AASDH (ENSPLOG00000004176) #35	PPAT (ENSPLOG00000004193) #36
Cat	MODERN SPECIES	235	FRYL (ENSFCAG00000005489)	OCIAD1 (ENSFCAG00000023294)	OCIAD2 (ENSFCAG00000027332)	CWH43 (ENSFCAG00000003695)	DCUN1D4 (ENSFCAG00000023410)	ENSFCAG00000042278	SGCB (ENSFCAG00000027835)	SPATA18 (ENSFCAG00000006689)	USP46 (ENSFCAG00000014294)	ERVMER34-1 (ENSFCAG00000042785)	RASL11B (ENSFCAG00000045595)	SCFD2 (ENSFCAG00000007895) #18	FIP1L1 (ENSFCAG00000022148)	LNX1 (ENSFCAG00000007897) #20	CHIC2 (ENSFCAG00000045270) #21	GSX2 (ENSFCAG00000025271) #22	ENSFCAG00000024388	PDGFRA (ENSFCAG00000009141) #23	KIT (ENSFCAG00000003112) #24	KDR (ENSFCAG00000009679) #25	SRD5A3 (ENSFCAG00000028749) #26	TMEM165 (ENSFCAG00000029712) #27	CLOCK (ENSFCAG00000001064) #28	PDCL2 (ENSFCAG00000024688) #29	NMU (ENSFCAG00000034809) #30	EXOC1L (ENSFCAG00000034057) #31	EXOC1 (ENSFCAG00000018823) #32	CEP135 (ENSFCAG00000014189) #33	CRACD (ENSFCAG00000006569) #34	AASDH (ENSFCAG00000006574) #35	PPAT (ENSFCAG00000026916) #36
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Equus	ANCESTRAL SPECIES	12	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01080000257472 #19	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00950000183144.A.i.a.b.f	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00940000164461
Donkey	MODERN SPECIES	22	ZAR1 (ENSEASG00005026845)	FRYL (ENSEASG00005009561)	OCIAD1 (ENSEASG00005014321)	OCIAD2 (ENSEASG00005014323)	CWH43 (ENSEASG00005014324)	DCUN1D4 (ENSEASG00005014327)	LRRC66 (ENSEASG00005004297)	SGCB (ENSEASG00005004301)	SPATA18 (ENSEASG00005037001)	USP46 (ENSEASG00005019951)	RASL11B (ENSEASG00005024651)	SCFD2 (ENSEASG00005019936) #18	ENSEASG00005019566	LNX1 (ENSEASG00005019513) #20	CHIC2 (ENSEASG00005033054) #21	GSX2 (ENSEASG00005019509) #22	PDGFRA (ENSEASG00005019499) #23	ENSEASG00005024773 #23	KIT (ENSEASG00005019490) #24	ENSEASG00005019484	KDR (ENSEASG00005019475) #25	SRD5A3 (ENSEASG00005019468) #26	TMEM165 (ENSEASG00005019466) #27	CLOCK (ENSEASG00005018895) #28	PDCL2 (ENSEASG00005018854) #29	NMU (ENSEASG00005038160) #30	EXOC1L (ENSEASG00005018850) #31	EXOC1 (ENSEASG00005018001) #32	CEP135 (ENSEASG00005017805) #33	CRACD (ENSEASG00005017786) #34	AASDH (ENSEASG00005017782) #35
Horse	MODERN SPECIES	22	SLC10A4 (ENSECAG00000021654)	ZAR1 (ENSECAG00000021644)	FRYL (ENSECAG00000025119)	OCIAD1 (ENSECAG00000024976)	OCIAD2 (ENSECAG00000024972)	CWH43 (ENSECAG00000024870)	DCUN1D4 (ENSECAG00000023996)	LRRC66 (ENSECAG00000022299)	SGCB (ENSECAG00000020148)	SPATA18 (ENSECAG00000017782)	USP46 (ENSECAG00000009006)	RASL11B (ENSECAG00000003789)	SCFD2 (ENSECAG00000002235) #18	FIP1L1 (ENSECAG00000019415) #19	LNX1 (ENSECAG00000017017) #20	GSX2 (ENSECAG00000013430) #22	CHIC2 (ENSECAG00000014019) #21	PDGFRA (ENSECAG00000018176) #23	KIT (ENSECAG00000012032) #24	ENSECAG00000011833	KDR (ENSECAG00000019429) #25	SRD5A3 (ENSECAG00000047094) #26	TMEM165 (ENSECAG00000018843) #27	CLOCK (ENSECAG00000006331) #28	PDCL2 (ENSECAG00000025160) #29	NMU (ENSECAG00000025148) #30	EXOC1L (ENSECAG00000035811) #31	EXOC1 (ENSECAG00000023793) #32	CEP135 (ENSECAG00000014393) #33	AASDH (ENSECAG00000009502) #35	CRACD (ENSECAG00000013781) #34
Chiroptera	ANCESTRAL SPECIES	9	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT00940000162578	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36
Megabat	MODERN SPECIES	4814															CHIC2 (ENSPVAG00000003563) #21	GSX2 (ENSPVAG00000003564) #22	PDGFRA (ENSPVAG00000003566) #23
Microchiroptera	ANCESTRAL SPECIES	10	ENSGT00390000012305.a	ENSGT00610000086058.a	ENSGT00530000063690.a.b.a.a	ENSGT00530000063690.a.b.a.b	ENSGT00510000048509	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00940000158643	ENSGT00390000011192 #18	ENSGT01060000248700	ENSGT00940000158757 #20	ENSGT00390000003601.b #21	ENSGT00940000156043 #22	ENSGT00940000156021 #23	ENSGT00940000155626 #24	ENSGT00940000156710 #25	ENSGT00500000044920 #26	ENSGT00390000005261 #27	ENSGT00910000148039	ENSGT00940000157580 #28	ENSGT00940000160654 #29	ENSGT00510000048726 #30	ENSGT00940000162193 #31	ENSGT00940000158640 #32	ENSGT00940000159453 #33	ENSGT00940000161471 #34	ENSGT00440000033811 #35	ENSGT00390000003428 #36
Microbat	MODERN SPECIES	1064							USP46 (ENSMLUG00000004691)	ENSMLUG00000025730	RASL11B (ENSMLUG00000029138)	ENSMLUG00000025132 #18	ENSMLUG00000006497 #18	ENSMLUG00000006503	LNX1 (ENSMLUG00000006515) #20	ENSMLUG00000022409	CHIC2 (ENSMLUG00000013335) #21	GSX2 (ENSMLUG00000006733) #22	PDGFRA (ENSMLUG00000006741) #23	ENSMLUG00000027786	KIT (ENSMLUG00000002438) #24	ENSMLUG00000027233	KDR (ENSMLUG00000013716) #25	SRD5A3 (ENSMLUG00000001485) #26	TMEM165 (ENSMLUG00000009990) #27	CLOCK (ENSMLUG00000010007) #28	PDCL2 (ENSMLUG00000009499) #29	EXOC1L (ENSMLUG00000022227) #31	EXOC1 (ENSMLUG00000015012) #32	CEP135 (ENSMLUG00000015028) #33	CRACD (ENSMLUG00000007250) #34	AASDH (ENSMLUG00000007266) #35	PPAT (ENSMLUG00000007298) #36
Greater horseshoe bat	MODERN SPECIES	23	PDS5A (ENSRFEG00010003178)	UBE2K (ENSRFEG00010003274)	SMIM14 (ENSRFEG00010003322)	UGDH (ENSRFEG00010003370)	LIAS (ENSRFEG00010003448)	ENSRFEG00010003514	KLB (ENSRFEG00010003533)	ENSRFEG00010003547	ENSRFEG00010003568	USP46 (ENSRFEG00010003627)	RASL11B (ENSRFEG00010003705)	SCFD2 (ENSRFEG00010003724) #18	ENSRFEG00010003908	LNX1 (ENSRFEG00010004004) #20	CHIC2 (ENSRFEG00010004049) #21	GSX2 (ENSRFEG00010004072) #22	PDGFRA (ENSRFEG00010004089) #23	ENSRFEG00010004150	KIT (ENSRFEG00010004158) #24	KDR (ENSRFEG00010004198) #25	SRD5A3 (ENSRFEG00010004226) #26	TMEM165 (ENSRFEG00010004276) #27	ENSRFEG00010004298	CLOCK (ENSRFEG00010004324) #28	PDCL2 (ENSRFEG00010004389) #29	NMU (ENSRFEG00010004411) #30	EXOC1L (ENSRFEG00010004444) #31	EXOC1 (ENSRFEG00010004491) #32	CEP135 (ENSRFEG00010004587) #33	CRACD (ENSRFEG00010004644) #34	AASDH (ENSRFEG00010004690) #35
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000156043 #22
Hedgehog	MODERN SPECIES	15791																GSX2 (ENSEEUG00000004576) #22