Gnathostomata ANCESTRAL SPECIES 166 ENSGT00940000155086.A ##29 ENSGT00940000153804.A #28 ENSGT00950000183117.b #27 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975 #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00390000008161.b Euteleostomi ANCESTRAL SPECIES 229 ENSGT00980000198967 ENSGT00940000158032 ENSGT00390000016516 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00390000008161.b ENSGT00940000177261 ENSGT00940000156975 #22 ENSGT00530000063834.e.b #23 Sarcopterygii ANCESTRAL SPECIES 218 ENSGT00980000198967 ENSGT00940000158032 ENSGT00390000016516 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00960000191541 ENSGT00940000153739.a.b #21 ENSGT00940000177261 ENSGT00940000156975 #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00390000008161.b Tetrapoda DUPLICATION Tetrapoda ANCESTRAL SPECIES 117 ENSGT00940000165510 ENSGT01030000234633.A ENSGT00980000198967 ENSGT00940000158032 ENSGT00390000016516 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.t.b ##22 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 Amniota ANCESTRAL SPECIES 1 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.t.b ##22 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT00940000158238 ENSGT00390000004380 ENSGT00950000185082 ENSGT00940000158598 Mammalia ANCESTRAL SPECIES 52 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 ENSGT00940000158032 Theria ANCESTRAL SPECIES 13 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Eutheria ANCESTRAL SPECIES 2 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Boreoeutheria ANCESTRAL SPECIES 15 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00960000189637 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Euarchontoglires ANCESTRAL SPECIES 15 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00960000189637 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Euarchontoglires_A ANCESTRAL SPECIES 14 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00960000189637 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Glires ANCESTRAL SPECIES 13 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00960000189637 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Rodentia ANCESTRAL SPECIES 15 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00960000189637 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Rodentia_A ANCESTRAL SPECIES 14 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00960000189637 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Hystricomorpha ANCESTRAL SPECIES 8 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Hystricomorpha_a ANCESTRAL SPECIES 31 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Guinea pig MODERN SPECIES 18 FAM228B (ENSCPOG00000030306) #7 ITSN2 (ENSCPOG00000013505) #8 ENSCPOG00000031710 #9 NCOA1 (ENSCPOG00000001117) #10 PTRHD1 (ENSCPOG00000005561) #11 CENPO (ENSCPOG00000005563) #12 ADCY3 (ENSCPOG00000005564) #13 DNAJC27 (ENSCPOG00000006843) #14 EFR3B (ENSCPOG00000013235) #15 POMC (ENSCPOG00000004474) #16 DNMT3A (ENSCPOG00000020900) #17 ENSCPOG00000004733 #18 ASXL2 (ENSCPOG00000007343) #19 ENSCPOG00000031398 #20 KIF3C (ENSCPOG00000037818) #21 RAB10 (ENSCPOG00000038345) #22 GAREM2 (ENSCPOG00000033262) #23 HADHA (ENSCPOG00000005945) #24 HADHB (ENSCPOG00000005418) #25 ADGRF3 (ENSCPOG00000000855) #26 SELENOI (ENSCPOG00000033910) #27 DRC1 (ENSCPOG00000000327) #28 OTOF (ENSCPOG00000000331) #29 FAM166C (ENSCPOG00000003754) #30 CIB4 (ENSCPOG00000003756) #31 KCNK3 (ENSCPOG00000019590) #32 SLC35F6 (ENSCPOG00000024555) #33 CENPA (ENSCPOG00000038745) #34 DPYSL5 (ENSCPOG00000008231) #35 MAPRE3 (ENSCPOG00000005103) #36 TMEM214 (ENSCPOG00000005106) #37 Hystricomorpha_b ANCESTRAL SPECIES 26 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT01000000214622 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Long-tailed chinchilla MODERN SPECIES 176 FAM228B (ENSCLAG00000004984) #7 ENSCLAG00000005849 ##7 ITSN2 (ENSCLAG00000013590) #8 NCOA1 (ENSCLAG00000012434) #10 PTRHD1 (ENSCLAG00000006505) #11 CENPO (ENSCLAG00000007716) #12 ADCY3 (ENSCLAG00000013780) #13 DNAJC27 (ENSCLAG00000008212) #14 EFR3B (ENSCLAG00000005527) #15 POMC (ENSCLAG00000010165) #16 DNMT3A (ENSCLAG00000011272) #17 ENSCLAG00000008767 #18 ENSCLAG00000009921 ASXL2 (ENSCLAG00000011428) #19 KIF3C (ENSCLAG00000015470) #21 RAB10 (ENSCLAG00000010979) #22 GAREM2 (ENSCLAG00000013430) #23 HADHA (ENSCLAG00000009530) #24 HADHB (ENSCLAG00000010359) #25 ENSCLAG00000011221 #26 SELENOI (ENSCLAG00000014310) #27 DRC1 (ENSCLAG00000016214) #28 OTOF (ENSCLAG00000009174) #29 FAM166C (ENSCLAG00000008355) #30 CIB4 (ENSCLAG00000008461) #31 KCNK3 (ENSCLAG00000011049) #32 SLC35F6 (ENSCLAG00000008346) #33 CENPA (ENSCLAG00000008835) #34 DPYSL5 (ENSCLAG00000011988) #35 MAPRE3 (ENSCLAG00000017298) #36 TMEM214 (ENSCLAG00000017342) #37 Degu MODERN SPECIES 60 PFN4 (ENSODEG00000008303) ENSODEG00000007545 #8 ENSODEG00000007584 NCOA1 (ENSODEG00000008181) #10 PTRHD1 (ENSODEG00000007805) #11 ADCY3 (ENSODEG00000007982) #13 DNAJC27 (ENSODEG00000007488) #14 EFR3B (ENSODEG00000007566) #15 POMC (ENSODEG00000010910) #16 ENSODEG00000009839 #18 ENSODEG00000012930 ASXL2 (ENSODEG00000009627) #19 ENSODEG00000009191 KIF3C (ENSODEG00000008275) #21 ENSODEG00000007394 RAB10 (ENSODEG00000008075) #22 GAREM2 (ENSODEG00000008492) #23 HADHA (ENSODEG00000009366) #24 HADHB (ENSODEG00000008596) #25 SELENOI (ENSODEG00000007845) #27 DRC1 (ENSODEG00000011420) #28 OTOF (ENSODEG00000007924) #29 CIB4 (ENSODEG00000008531) #31 KCNK3 (ENSODEG00000008235) #32 SLC35F6 (ENSODEG00000007078) #33 DPYSL5 (ENSODEG00000007347) #35 MAPRE3 (ENSODEG00000006780) #36 TMEM214 (ENSODEG00000008522) #37 AGBL5 (ENSODEG00000008715) EMILIN1 (ENSODEG00000007515) KHK (ENSODEG00000008065) Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000036802 ENSHGLG00000037668 ENSHGLG00000004625 ENSHGLG00000009240 #12 ENSHGLG00000010620 #13 DNAJC27 (ENSHGLG00000043432) #14 EFR3B (ENSHGLG00000009366) #15 POMC (ENSHGLG00000046270) #16 DNMT3A (ENSHGLG00000014901) #17 ENSHGLG00000033034 #18 ENSHGLG00000020949 ENSHGLG00000019126 ASXL2 (ENSHGLG00000006048) #19 ENSHGLG00000033377 #21 ENSHGLG00000035830 ENSHGLG00000047199 #22 ENSHGLG00000044435 GAREM2 (ENSHGLG00000018233) #23 HADHA (ENSHGLG00000014003) #24 HADHB (ENSHGLG00000006268) #25 ADGRF3 (ENSHGLG00000008001) #26 SELENOI (ENSHGLG00000011515) #27 DRC1 (ENSHGLG00000007441) #28 OTOF (ENSHGLG00000007386) #29 ENSHGLG00000035789 CIB4 (ENSHGLG00000017440) #31 KCNK3 (ENSHGLG00000005243) #32 SLC35F6 (ENSHGLG00000005351) #33 ENSHGLG00000007874 #34 DPYSL5 (ENSHGLG00000049058) #35 MAPRE3 (ENSHGLG00000018592) #36 Naked mole-rat female MODERN SPECIES 17 ENSHGLG00000020889 CARF (ENSHGLG00000007326) ENSHGLG00000037622 NBEAL1 (ENSHGLG00000004471) CYP20A1 (ENSHGLG00000050312) ABI2 (ENSHGLG00000007481) ENSHGLG00000005031 CD28 (ENSHGLG00000037192) CTLA4 (ENSHGLG00000009115) ICOS (ENSHGLG00000008777) ENSHGLG00000043313 ENSHGLG00000016877 ENSHGLG00000048100 PARD3B (ENSHGLG00000004982) NRP2 (ENSHGLG00000010562) ENSHGLG00000049876 #22 INO80D (ENSHGLG00000018537) NDUFS1 (ENSHGLG00000015179) EEF1B2 (ENSHGLG00000015147) ENSHGLG00000045433 CMKLR2 (ENSHGLG00000046982) ENSHGLG00000044712 ADAM23 (ENSHGLG00000006393) FAM237A (ENSHGLG00000030355) ENSHGLG00000005368 MDH1B (ENSHGLG00000004936) FASTKD2 (ENSHGLG00000004761) ENSHGLG00000045814 KLF7 (ENSHGLG00000044157) ENSHGLG00000017319 ENSHGLG00000047324 Sciuridae ANCESTRAL SPECIES 16 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00960000189637 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Marmotini ANCESTRAL SPECIES 14 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00960000189637 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 6 ENSMMMG00000021782 ##7 ITSN2 (ENSMMMG00000021696) #8 ENSMMMG00000021686 NCOA1 (ENSMMMG00000021650) #10 PTRHD1 (ENSMMMG00000021628) #11 CENPO (ENSMMMG00000021625) #12 ADCY3 (ENSMMMG00000021582) #13 DNAJC27 (ENSMMMG00000021572) #14 EFR3B (ENSMMMG00000021552) #15 ENSMMMG00000021550 #16 DNMT3A (ENSMMMG00000021507) #17 ENSMMMG00000021366 #18 ENSMMMG00000021345 ASXL2 (ENSMMMG00000021326) #19 KIF3C (ENSMMMG00000021315) #21 ENSMMMG00000021304 #22 GAREM2 (ENSMMMG00000021301) #23 HADHA (ENSMMMG00000021297) #24 HADHB (ENSMMMG00000021287) #25 ADGRF3 (ENSMMMG00000021278) #26 SELENOI (ENSMMMG00000021266) #27 DRC1 (ENSMMMG00000021257) #28 OTOF (ENSMMMG00000021193) #29 FAM166C (ENSMMMG00000021179) #30 CIB4 (ENSMMMG00000021175) #31 KCNK3 (ENSMMMG00000021162) #32 SLC35F6 (ENSMMMG00000021156) #33 CENPA (ENSMMMG00000021149) #34 DPYSL5 (ENSMMMG00000021125) #35 ENSMMMG00000021119 MAPRE3 (ENSMMMG00000021097) #36 Alpin marmot MODERN SPECIES 89 ENSMMMG00000021906 #22 ENSMMMG00000021907 NUDT11 (ENSMMMG00000021913) ENSMMMG00000021916 ENSMMMG00000021923 ROR2 (ENSMMMG00000021925) NFIL3 (ENSMMMG00000021947) ENSMMMG00000021950 SYK (ENSMMMG00000021952) GADD45G (ENSMMMG00000021965) SEMA4D (ENSMMMG00000021970) ENSMMMG00000021973 SECISBP2 (ENSMMMG00000021975) CKS2 (ENSMMMG00000021980) SHC3 (ENSMMMG00000021983) S1PR3 (ENSMMMG00000021989) Marmotini_b ANCESTRAL SPECIES 17 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00960000189637 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Arctic ground squirrel MODERN SPECIES PFN4 (ENSUPAG00010008634) ENSUPAG00010008599 #7 ITSN2 (ENSUPAG00010008430) #8 ENSUPAG00010008420 NCOA1 (ENSUPAG00010008344) #10 PTRHD1 (ENSUPAG00010008340) #11 CENPO (ENSUPAG00010008319) #12 ADCY3 (ENSUPAG00010008224) #13 DNAJC27 (ENSUPAG00010008208) #14 EFR3B (ENSUPAG00010008174) #15 POMC (ENSUPAG00010008168) #16 DNMT3A (ENSUPAG00010008081) #17 ENSUPAG00010007737 #18 ASXL2 (ENSUPAG00010007692) #19 KIF3C (ENSUPAG00010007680) #21 RAB10 (ENSUPAG00010007668) #22 GAREM2 (ENSUPAG00010007652) #23 ENSUPAG00010007631 #24 HADHB (ENSUPAG00010007620) #25 ADGRF3 (ENSUPAG00010007600) #26 SELENOI (ENSUPAG00010007592) #27 DRC1 (ENSUPAG00010007561) #28 OTOF (ENSUPAG00010007436) #29 FAM166C (ENSUPAG00010007420) #30 CIB4 (ENSUPAG00010007407) #31 KCNK3 (ENSUPAG00010007399) #32 SLC35F6 (ENSUPAG00010007387) #33 CENPA (ENSUPAG00010007380) #34 DPYSL5 (ENSUPAG00010007343) #35 MAPRE3 (ENSUPAG00010007328) #36 TMEM214 (ENSUPAG00010007212) #37 Squirrel MODERN SPECIES 93 FAM228B (ENSSTOG00000033164) #7 ENSSTOG00000003159 ##7 ITSN2 (ENSSTOG00000003181) #8 NCOA1 (ENSSTOG00000005990) #10 PTRHD1 (ENSSTOG00000006030) #11 CENPO (ENSSTOG00000006039) #12 ADCY3 (ENSSTOG00000006049) #13 DNAJC27 (ENSSTOG00000006080) #14 EFR3B (ENSSTOG00000023043) #15 POMC (ENSSTOG00000006150) #16 DNMT3A (ENSSTOG00000022154) #17 ENSSTOG00000015511 #18 ENSSTOG00000034335 ASXL2 (ENSSTOG00000013729) #19 KIF3C (ENSSTOG00000013740) #21 RAB10 (ENSSTOG00000023160) #22 GAREM2 (ENSSTOG00000022734) #23 HADHA (ENSSTOG00000001593) #24 HADHB (ENSSTOG00000001601) #25 ADGRF3 (ENSSTOG00000001610) #26 SELENOI (ENSSTOG00000001622) #27 DRC1 (ENSSTOG00000001637) #28 OTOF (ENSSTOG00000020549) #29 FAM166C (ENSSTOG00000032726) #30 CIB4 (ENSSTOG00000002407) #31 KCNK3 (ENSSTOG00000000037) #32 SLC35F6 (ENSSTOG00000005833) #33 CENPA (ENSSTOG00000025168) #34 DPYSL5 (ENSSTOG00000009791) #35 MAPRE3 (ENSSTOG00000015500) #36 TMEM214 (ENSSTOG00000015505) #37 Eurasian red squirrel MODERN SPECIES 5 ENSSVLG00005022466 NCOA1 (ENSSVLG00005022362) #10 PTRHD1 (ENSSVLG00005022312) #11 CENPO (ENSSVLG00005022224) #12 ADCY3 (ENSSVLG00005022153) #13 ENSSVLG00005022096 ENSSVLG00005022076 DNAJC27 (ENSSVLG00005022027) #14 EFR3B (ENSSVLG00005021623) #15 POMC (ENSSVLG00005021550) #16 DNMT3A (ENSSVLG00005021301) #17 ENSSVLG00005021051 #18 ASXL2 (ENSSVLG00005020772) #19 ENSSVLG00005020731 KIF3C (ENSSVLG00005020692) #21 RAB10 (ENSSVLG00005020645) #22 GAREM2 (ENSSVLG00005020605) #23 HADHA (ENSSVLG00005020540) #24 HADHB (ENSSVLG00005020328) #25 ADGRF3 (ENSSVLG00005019818) #26 ENSSVLG00005019538 SELENOI (ENSSVLG00005019494) #27 DRC1 (ENSSVLG00005019360) #28 OTOF (ENSSVLG00005017767) #29 FAM166C (ENSSVLG00005017545) #30 CIB4 (ENSSVLG00005017439) #31 KCNK3 (ENSSVLG00005017388) #32 SLC35F6 (ENSSVLG00005017344) #33 ENSSVLG00005017194 #34 DPYSL5 (ENSSVLG00005017026) #35 MAPRE3 (ENSSVLG00005016937) #36 Rodentia_B ANCESTRAL SPECIES 14 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Kangaroo rat MODERN SPECIES 339 Pfn4 (ENSDORG00000013388) Fam228b (ENSDORG00000028363) #7 Itsn2 (ENSDORG00000004645) #8 Ncoa1 (ENSDORG00000001089) #10 Ptrhd1 (ENSDORG00000026776) #11 Cenpo (ENSDORG00000013630) #12 Adcy3 (ENSDORG00000007778) #13 Dnajc27 (ENSDORG00000015134) #14 ENSDORG00000029715 Efr3b (ENSDORG00000005575) #15 Pomc (ENSDORG00000005577) #16 Dnmt3a (ENSDORG00000010021) #17 Dtnb (ENSDORG00000005817) #18 Asxl2 (ENSDORG00000013989) #19 Kif3c (ENSDORG00000003700) #21 Rab10 (ENSDORG00000023416) #22 Garem2 (ENSDORG00000015031) #23 Hadha (ENSDORG00000015032) #24 ENSDORG00000008292 #25 Adgrf3 (ENSDORG00000008293) #26 Selenoi (ENSDORG00000013109) #27 Drc1 (ENSDORG00000013116) #28 Otof (ENSDORG00000013123) #29 Fam166c (ENSDORG00000013129) #30 Cib4 (ENSDORG00000029788) #31 Kcnk3 (ENSDORG00000010916) #32 Slc35f6 (ENSDORG00000026032) #33 Cenpa (ENSDORG00000000750) #34 Dpysl5 (ENSDORG00000014064) #35 Mapre3 (ENSDORG00000001038) #36 Tmem214 (ENSDORG00000001039) #37 Myomorpha ANCESTRAL SPECIES 24 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 106 Ncoa1 (ENSJJAG00000000608) #10 Ptrhd1 (ENSJJAG00000024180) #11 Cenpo (ENSJJAG00000019283) #12 Adcy3 (ENSJJAG00000018411) #13 Dnajc27 (ENSJJAG00000016683) #14 ENSJJAG00000016036 Efr3b (ENSJJAG00000014981) #15 Pomc (ENSJJAG00000003230) #16 Dnmt3a (ENSJJAG00000002007) #17 ENSJJAG00000016173 Dtnb (ENSJJAG00000014850) #18 ENSJJAG00000013951 Asxl2 (ENSJJAG00000020150) #19 ENSJJAG00000013909 Kif3c (ENSJJAG00000018278) #21 ENSJJAG00000018461 #22 Garem2 (ENSJJAG00000017758) #23 Hadha (ENSJJAG00000017662) #24 Hadhb (ENSJJAG00000016783) #25 ENSJJAG00000016201 #26 ENSJJAG00000016077 Lesser Egyptian jerboa MODERN SPECIES 225 ENSJJAG00000018651 ENSJJAG00000018618 ENSJJAG00000018441 ENSJJAG00000018333 #22 ENSJJAG00000018267 ENSJJAG00000017939 ENSJJAG00000017417 Cyp4b1 (ENSJJAG00000016817) ENSJJAG00000016537 Efcab14 (ENSJJAG00000016349) Tex38 (ENSJJAG00000010819) ENSJJAG00000010592 Mob3c (ENSJJAG00000010451) Mknk1 (ENSJJAG00000009067) Kncn (ENSJJAG00000007732) Tmem275 (ENSJJAG00000007503) Dmbx1 (ENSJJAG00000006632) ENSJJAG00000012011 Faah (ENSJJAG00000005088) Muroidea ANCESTRAL SPECIES 21 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Upper Galilee mountains blind mole rat MODERN SPECIES 904 Asxl2 (ENSNGAG00000017809) #19 Kif3c (ENSNGAG00000017317) #21 Rab10 (ENSNGAG00000019140) #22 Garem2 (ENSNGAG00000019452) #23 Hadha (ENSNGAG00000000257) #24 ENSNGAG00000014735 #25 Adgrf3 (ENSNGAG00000018193) #26 ENSNGAG00000016715 ENSNGAG00000018498 #27 ENSNGAG00000003438 #27 Drc1 (ENSNGAG00000012970) #28 ENSNGAG00000019910 ENSNGAG00000020417 Otof (ENSNGAG00000012602) #29 Fam166c (ENSNGAG00000015810) #30 Cib4 (ENSNGAG00000016496) #31 Kcnk3 (ENSNGAG00000018512) #32 Slc35f6 (ENSNGAG00000018757) #33 Muroidea_A ANCESTRAL SPECIES 24 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00700000106164 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 Cricetidae ANCESTRAL SPECIES 24 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00700000106164 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 Cricetinae ANCESTRAL SPECIES ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Chinese hamster chok1gshd MODERN SPECIES 229 ENSCGRG00001011738 Pfn4 (ENSCGRG00001013229) Fam228b (ENSCGRG00001002148) #7 Itsn2 (ENSCGRG00001014840) #8 Ncoa1 (ENSCGRG00001009336) #10 Ptrhd1 (ENSCGRG00001003289) #11 ENSCGRG00001025010 #12 Adcy3 (ENSCGRG00001010489) #13 Dnajc27 (ENSCGRG00001023794) #14 Efr3b (ENSCGRG00001024941) #15 Pomc (ENSCGRG00001023516) #16 Dnmt3a (ENSCGRG00001020172) #17 Dtnb (ENSCGRG00001024414) #18 Asxl2 (ENSCGRG00001024434) #19 Kif3c (ENSCGRG00001019464) #21 Rab10 (ENSCGRG00001018289) #22 Garem2 (ENSCGRG00001015014) #23 Hadha (ENSCGRG00001020547) #24 Hadhb (ENSCGRG00001015973) #25 Adgrf3 (ENSCGRG00001006414) #26 Selenoi (ENSCGRG00001008322) #27 Drc1 (ENSCGRG00001017306) #28 Otof (ENSCGRG00001015298) #29 Fam166c (ENSCGRG00001025030) #30 Cib4 (ENSCGRG00001024923) #31 Kcnk3 (ENSCGRG00001020254) #32 Slc35f6 (ENSCGRG00001024274) #33 ENSCGRG00001005366 CENPA (ENSCGRG00001016945) #34 Dpysl5 (ENSCGRG00001020912) #35 Mapre3 (ENSCGRG00001025011) #36 Golden Hamster MODERN SPECIES 705 ENSMAUG00000004078 Fam228b (ENSMAUG00000017259) #7 Fam228a (ENSMAUG00000019010) ##7 Itsn2 (ENSMAUG00000015636) #8 Ncoa1 (ENSMAUG00000016768) #10 Ptrhd1 (ENSMAUG00000019251) #11 ENSMAUG00000017198 #12 Adcy3 (ENSMAUG00000019311) #13 Dnajc27 (ENSMAUG00000000099) #14 Efr3b (ENSMAUG00000000436) #15 Pomc (ENSMAUG00000007673) #16 Dnmt3a (ENSMAUG00000012211) #17 Dtnb (ENSMAUG00000013638) #18 Asxl2 (ENSMAUG00000017967) #19 Kif3c (ENSMAUG00000016707) #21 Rab10 (ENSMAUG00000000087) #22 Cricetidae_B ANCESTRAL SPECIES 43 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00700000106164 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 Prairie vole MODERN SPECIES 353 Fam228b (ENSMOCG00000006563) #7 Fam228a (ENSMOCG00000003050) ##7 Itsn2 (ENSMOCG00000008139) #8 Ncoa1 (ENSMOCG00000015188) #10 Ptrhd1 (ENSMOCG00000001204) #11 ENSMOCG00000004487 #12 Adcy3 (ENSMOCG00000000285) #13 Dnajc27 (ENSMOCG00000015357) #14 Efr3b (ENSMOCG00000017910) #15 Pomc (ENSMOCG00000010293) #16 ENSMOCG00000020449 #17 Dtnb (ENSMOCG00000015987) #18 ENSMOCG00000001748 Asxl2 (ENSMOCG00000003954) #19 Kif3c (ENSMOCG00000000499) #21 Rab10 (ENSMOCG00000020028) #22 ENSMOCG00000013952 Garem2 (ENSMOCG00000003375) #23 Hadha (ENSMOCG00000019513) #24 ENSMOCG00000015399 Il6 (ENSMOCG00000008857) Hycc1 (ENSMOCG00000012168) Klhl7 (ENSMOCG00000014969) Nupl2 (ENSMOCG00000014431) Gpnmb (ENSMOCG00000017232) Malsu1 (ENSMOCG00000011177) Igf2bp3 (ENSMOCG00000001740) ENSMOCG00000014464 ENSMOCG00000007609 Ccdc126 (ENSMOCG00000004033) Fam221a (ENSMOCG00000005873) Northern American deer mouse MODERN SPECIES 46 Kif3c (ENSPEMG00000010789) #21 Rab10 (ENSPEMG00000028503) #22 Garem2 (ENSPEMG00000015400) #23 Hadha (ENSPEMG00000007938) #24 ENSPEMG00000018337 #25 Murinae ANCESTRAL SPECIES 8 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00700000106164 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 Mus ANCESTRAL SPECIES 10 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00700000106164 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 Mus_A ANCESTRAL SPECIES 17 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 Mus_B ANCESTRAL SPECIES 17 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 Mouse MODERN SPECIES 3 Pfn4 (ENSMUSG00000020639) Fam228b (ENSMUSG00000050545) #7 Fam228a (ENSMUSG00000079177) ##7 Itsn2 (ENSMUSG00000020640) #8 Ncoa1 (ENSMUSG00000020647) #10 Ptrhd1 (ENSMUSG00000096199) #11 Cenpo (ENSMUSG00000020652) #12 Adcy3 (ENSMUSG00000020654) #13 Dnajc27 (ENSMUSG00000020657) #14 Efr3b (ENSMUSG00000020658) #15 Pomc (ENSMUSG00000020660) #16 Dnmt3a (ENSMUSG00000020661) #17 Dtnb (ENSMUSG00000071454) #18 Asxl2 (ENSMUSG00000037486) #19 Kif3c (ENSMUSG00000020668) #21 Rab10 (ENSMUSG00000020671) #22 Mus_C ANCESTRAL SPECIES 11 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.a.b ##18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 spretus MODERN SPECIES 3 Fam228a (MGP_SPRETEiJ_G0018431) ##7 MGP_SPRETEiJ_G0018430 Itsn2 (MGP_SPRETEiJ_G0018429) #8 MGP_SPRETEiJ_G0018428 Ncoa1 (MGP_SPRETEiJ_G0018427) #10 Ptrhd1 (MGP_SPRETEiJ_G0018426) #11 Cenpo (MGP_SPRETEiJ_G0018425) #12 Adcy3 (MGP_SPRETEiJ_G0018424) #13 Dnajc27 (MGP_SPRETEiJ_G0018423) #14 Efr3b (MGP_SPRETEiJ_G0018422) #15 Pomc (MGP_SPRETEiJ_G0018421) #16 MGP_SPRETEiJ_G0018420 Dtnb (MGP_SPRETEiJ_G0018418) #18 Asxl2 (MGP_SPRETEiJ_G0018417) #19 Kif3c (MGP_SPRETEiJ_G0018416) #21 Rab10 (MGP_SPRETEiJ_G0018415) #22 Steppe mouse MODERN SPECIES 25 ENSMSIG00000029294 Ncoa1 (ENSMSIG00000029252) #10 ENSMSIG00000029247 Ptrhd1 (ENSMSIG00000029244) #11 Cenpo (ENSMSIG00000029237) #12 Adcy3 (ENSMSIG00000029208) #13 Dnajc27 (ENSMSIG00000029205) #14 Efr3b (ENSMSIG00000029204) #15 Pomc (ENSMSIG00000029200) #16 ENSMSIG00000029199 Dnmt3a (ENSMSIG00000029189) #17 ENSMSIG00000029185 ##18 ENSMSIG00000029176 Asxl2 (ENSMSIG00000029159) #19 Kif3c (ENSMSIG00000029156) #21 Rab10 (ENSMSIG00000029153) #22 ENSMSIG00000029152 Ryukyu mouse MODERN SPECIES 3 MGP_CAROLIEiJ_G0017586 MGP_CAROLIEiJ_G0017585 #8 MGP_CAROLIEiJ_G0017584 Ncoa1 (MGP_CAROLIEiJ_G0017583) #10 Ptrhd1 (MGP_CAROLIEiJ_G0017582) #11 Cenpo (MGP_CAROLIEiJ_G0017581) #12 Adcy3 (MGP_CAROLIEiJ_G0017580) #13 Dnajc27 (MGP_CAROLIEiJ_G0017579) #14 Efr3b (MGP_CAROLIEiJ_G0017578) #15 Pomc (MGP_CAROLIEiJ_G0017577) #16 MGP_CAROLIEiJ_G0017576 Dnmt3a (MGP_CAROLIEiJ_G0017575) #17 Dtnb (MGP_CAROLIEiJ_G0017574) #18 Asxl2 (MGP_CAROLIEiJ_G0017573) #19 Kif3c (MGP_CAROLIEiJ_G0017572) #21 Rab10 (MGP_CAROLIEiJ_G0017571) #22 Shrew mouse MODERN SPECIES 20 Sf3b6 (MGP_PahariEiJ_G0029348) Pfn4 (MGP_PahariEiJ_G0029347) Fam228b (MGP_PahariEiJ_G0029346) #7 Fam228a (MGP_PahariEiJ_G0029345) ##7 Itsn2 (MGP_PahariEiJ_G0029344) #8 MGP_PahariEiJ_G0029343 Ncoa1 (MGP_PahariEiJ_G0029342) #10 MGP_PahariEiJ_G0029341 #12 MGP_PahariEiJ_G0029340 #13 MGP_PahariEiJ_G0029339 #14 Efr3b (MGP_PahariEiJ_G0029338) #15 Pomc (MGP_PahariEiJ_G0029337) #16 Dnmt3a (MGP_PahariEiJ_G0029336) #17 MGP_PahariEiJ_G0029335 #18 Kif3c (MGP_PahariEiJ_G0029333) #21 Rab10 (MGP_PahariEiJ_G0029332) #22 MGP_PahariEiJ_G0029331 Garem2 (MGP_PahariEiJ_G0029330) #23 Hadha (MGP_PahariEiJ_G0029329) #24 Hadhb (MGP_PahariEiJ_G0029328) #25 Adgrf3 (MGP_PahariEiJ_G0029327) #26 MGP_PahariEiJ_G0029326 #27 Drc1 (MGP_PahariEiJ_G0029325) #28 Otof (MGP_PahariEiJ_G0029324) #29 Fam166c (MGP_PahariEiJ_G0029323) #30 Cib4 (MGP_PahariEiJ_G0029322) #31 Kcnk3 (MGP_PahariEiJ_G0029321) #32 Slc35f6 (MGP_PahariEiJ_G0029320) #33 MGP_PahariEiJ_G0029319 #34 MGP_PahariEiJ_G0029318 #35 Mapre3 (MGP_PahariEiJ_G0029317) #36 Rat MODERN SPECIES 16 AABR07052130.1 (ENSRNOG00000008501) Itsn2 (ENSRNOG00000046741) #8 Ncoa1 (ENSRNOG00000004068) #10 Ptrhd1 (ENSRNOG00000004059) #11 Cenpo (ENSRNOG00000050111) #12 Adcy3 (ENSRNOG00000003999) #13 LOC120103497 (ENSRNOG00000052193) Dnajc27 (ENSRNOG00000003988) #14 Efr3b (ENSRNOG00000012950) #15 Pomc (ENSRNOG00000012686) #16 Dnmt3a (ENSRNOG00000026649) #17 Dtnb (ENSRNOG00000011914) #18 ENSRNOG00000066562 #19 Asxl2 (ENSRNOG00000011908) #19 Kif3c (ENSRNOG00000011394) #21 Rab10 (ENSRNOG00000047088) #22 ENSRNOG00000069124 ##20 3110082J24Rik (ENSRNOG00000046262) Garem2 (ENSRNOG00000048004) #23 Hadha (ENSRNOG00000024629) #24 Hadhb (ENSRNOG00000010800) #25 Adgrf3 (ENSRNOG00000024766) #26 Selenoi (ENSRNOG00000059295) #27 Drc1 (ENSRNOG00000024905) #28 Otof (ENSRNOG00000009967) #29 Fam166c (ENSRNOG00000009905) #30 Cib4 (ENSRNOG00000009898) #31 Kcnk3 (ENSRNOG00000009790) #32 Slc35f6 (ENSRNOG00000009459) #33 Cenpa (ENSRNOG00000032178) #34 Dpysl5 (ENSRNOG00000008996) #35 Lagomorpha ANCESTRAL SPECIES 10 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Rabbit MODERN SPECIES 11 ENSOCUG00000037275 DDX1 (ENSOCUG00000007010) NBAS (ENSOCUG00000015460) ENSOCUG00000023292 ENSOCUG00000039105 LRATD1 (ENSOCUG00000002283) ENSOCUG00000039303 TRIB2 (ENSOCUG00000003153) ENSOCUG00000031382 ENSOCUG00000038693 LPIN1 (ENSOCUG00000003071) NTSR2 (ENSOCUG00000021232) ENSOCUG00000001249 #18 ASXL2 (ENSOCUG00000017108) #19 KIF3C (ENSOCUG00000015014) #21 RAB10 (ENSOCUG00000029308) #22 GAREM2 (ENSOCUG00000009777) #23 HADHA (ENSOCUG00000009786) #24 ENSOCUG00000000012 #25 ADGRF3 (ENSOCUG00000012452) #26 SELENOI (ENSOCUG00000015554) #27 DRC1 (ENSOCUG00000015559) #28 OTOF (ENSOCUG00000015585) #29 CIB4 (ENSOCUG00000026765) #31 KCNK3 (ENSOCUG00000025172) #32 SLC35F6 (ENSOCUG00000022141) #33 CENPA (ENSOCUG00000028221) #34 DPYSL5 (ENSOCUG00000014846) #35 MAPRE3 (ENSOCUG00000014861) #36 TMEM214 (ENSOCUG00000014868) #37 AGBL5 (ENSOCUG00000014887) Pika MODERN SPECIES 5043 RAB10 (ENSOPRG00000009353) #22 GAREM2 (ENSOPRG00000009368) #23 HADHA (ENSOPRG00000009405) #24 HADHB (ENSOPRG00000009448) #25 ADGRF3 (ENSOPRG00000009469) #26 SELENOI (ENSOPRG00000009501) #27 DRC1 (ENSOPRG00000009515) #28 Tree shrew MODERN SPECIES 5728 RAB10 (ENSTBEG00000016698) #22 ENSTBEG00000016837 #23 HADHA (ENSTBEG00000017118) #24 HADHB (ENSTBEG00000017273) #25 ADGRF3 (ENSTBEG00000009683) #26 SELENOI (ENSTBEG00000010575) #27 DRC1 (ENSTBEG00000010975) #28 OTOF (ENSTBEG00000011633) #29 FAM166C (ENSTBEG00000012845) #30 CIB4 (ENSTBEG00000013001) #31 KCNK3 (ENSTBEG00000013101) #32 SLC35F6 (ENSTBEG00000013291) #33 DPYSL5 (ENSTBEG00000013379) #35 MAPRE3 (ENSTBEG00000013617) #36 TMEM214 (ENSTBEG00000013868) #37 Primates ANCESTRAL SPECIES 14 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Strepsirrhini ANCESTRAL SPECIES 13 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Lemuriformes ANCESTRAL SPECIES 23 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Mouse lemur DUPLICATION Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 14 PRKCG (ENSMICG00000015697) NLRP12 (ENSMICG00000045956) DPRX (ENSMICG00000047562) ZNF331 (ENSMICG00000028478) ENSMICG00000033427 ENSMICG00000045714 ENSMICG00000031054 ENSMICG00000043851 ENSMICG00000042640 ENSMICG00000042544 ENSMICG00000028055 ENSMICG00000007824 ENSMICG00000046471 ZNF160 (ENSMICG00000005265) ZNF415 (ENSMICG00000038620) ENSMICG00000026989 #22 ENSMICG00000046000 #22 ZNF677 (ENSMICG00000015174) ENSMICG00000034321 ENSMICG00000012504 ZNF841 (ENSMICG00000028869) ENSMICG00000027221 ZNF615 (ENSMICG00000034156) ZNF613 (ENSMICG00000002776) ENSMICG00000026910 ZNF649 (ENSMICG00000042526) FPR1 (ENSMICG00000008505) HAS1 (ENSMICG00000035879) SPACA6 (ENSMICG00000042174) ENSMICG00000004597 ZNF175 (ENSMICG00000017565) Mouse lemur MODERN SPECIES 14 NLRP12 (ENSMICG00000045956) DPRX (ENSMICG00000047562) ZNF331 (ENSMICG00000028478) ENSMICG00000033427 ENSMICG00000045714 ENSMICG00000031054 ENSMICG00000043851 ENSMICG00000042640 ENSMICG00000042544 ENSMICG00000028055 ENSMICG00000007824 ENSMICG00000046471 ZNF160 (ENSMICG00000005265) ZNF415 (ENSMICG00000038620) ENSMICG00000026989 #22 ENSMICG00000046000 #22 ZNF677 (ENSMICG00000015174) ENSMICG00000034321 ENSMICG00000012504 ZNF841 (ENSMICG00000028869) ENSMICG00000027221 ZNF615 (ENSMICG00000034156) ZNF613 (ENSMICG00000002776) ENSMICG00000026910 ZNF649 (ENSMICG00000042526) FPR1 (ENSMICG00000008505) HAS1 (ENSMICG00000035879) SPACA6 (ENSMICG00000042174) ENSMICG00000004597 ZNF175 (ENSMICG00000017565) ENSMICG00000031727 Mouse lemur MODERN SPECIES 30 PFN4 (ENSMICG00000001541) FAM228B (ENSMICG00000032483) #7 FAM228A (ENSMICG00000001546) ##7 ITSN2 (ENSMICG00000001552) #8 NCOA1 (ENSMICG00000037585) #10 PTRHD1 (ENSMICG00000001578) #11 CENPO (ENSMICG00000001580) #12 ADCY3 (ENSMICG00000001584) #13 DNAJC27 (ENSMICG00000027424) #14 EFR3B (ENSMICG00000001606) #15 POMC (ENSMICG00000001616) #16 ENSMICG00000004108 #17 ENSMICG00000001238 #18 ASXL2 (ENSMICG00000038141) #19 KIF3C (ENSMICG00000029603) #21 ENSMICG00000037941 #22 GAREM2 (ENSMICG00000014228) #23 HADHA (ENSMICG00000014248) #24 HADHB (ENSMICG00000006750) #25 ADGRF3 (ENSMICG00000006761) #26 SELENOI (ENSMICG00000006775) #27 DRC1 (ENSMICG00000006785) #28 OTOF (ENSMICG00000006807) #29 FAM166C (ENSMICG00000044017) #30 CIB4 (ENSMICG00000006843) #31 KCNK3 (ENSMICG00000006852) #32 ENSMICG00000032231 SLC35F6 (ENSMICG00000006854) #33 CENPA (ENSMICG00000034107) #34 DPYSL5 (ENSMICG00000017006) #35 MAPRE3 (ENSMICG00000016874) #36 Lemuriformes_a ANCESTRAL SPECIES 10 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000172407 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Greater bamboo lemur MODERN SPECIES 4 ENSPSMG00000005701 #8 ENSPSMG00000005687 ENSPSMG00000005684 NCOA1 (ENSPSMG00000005577) #10 PTRHD1 (ENSPSMG00000005516) #11 CENPO (ENSPSMG00000005515) #12 ADCY3 (ENSPSMG00000005496) #13 DNAJC27 (ENSPSMG00000005456) #14 EFR3B (ENSPSMG00000005442) #15 POMC (ENSPSMG00000005433) #16 DNMT3A (ENSPSMG00000005403) #17 DTNB (ENSPSMG00000005314) ASXL2 (ENSPSMG00000005276) #19 ENSPSMG00000005229 KIF3C (ENSPSMG00000005196) #21 RAB10 (ENSPSMG00000005159) #22 GAREM2 (ENSPSMG00000005141) #23 HADHA (ENSPSMG00000005094) #24 HADHB (ENSPSMG00000004850) #25 ADGRF3 (ENSPSMG00000004677) #26 ENSPSMG00000004670 SELENOI (ENSPSMG00000004662) #27 DRC1 (ENSPSMG00000004646) #28 OTOF (ENSPSMG00000004578) #29 FAM166C (ENSPSMG00000004376) #30 CIB4 (ENSPSMG00000004366) #31 KCNK3 (ENSPSMG00000004353) #32 SLC35F6 (ENSPSMG00000004346) #33 CENPA (ENSPSMG00000004325) #34 DPYSL5 (ENSPSMG00000004304) #35 MAPRE3 (ENSPSMG00000004237) #36 Coquerels sifaka MODERN SPECIES 534 FAM228A (ENSPCOG00000002187) ##7 ITSN2 (ENSPCOG00000022978) #8 NCOA1 (ENSPCOG00000020541) #10 PTRHD1 (ENSPCOG00000003110) #11 CENPO (ENSPCOG00000006257) #12 ADCY3 (ENSPCOG00000020363) #13 DNAJC27 (ENSPCOG00000025665) #14 EFR3B (ENSPCOG00000014434) #15 POMC (ENSPCOG00000028772) #16 DNMT3A (ENSPCOG00000025150) #17 ENSPCOG00000013999 #18 ASXL2 (ENSPCOG00000027270) #19 ENSPCOG00000007714 ENSPCOG00000016865 KIF3C (ENSPCOG00000026164) #21 RAB10 (ENSPCOG00000026753) #22 GAREM2 (ENSPCOG00000017304) #23 HADHA (ENSPCOG00000021407) #24 HADHB (ENSPCOG00000013733) #25 ADGRF3 (ENSPCOG00000019825) #26 ENSPCOG00000017322 #27 DRC1 (ENSPCOG00000014033) #28 OTOF (ENSPCOG00000013923) #29 FAM166C (ENSPCOG00000024050) #30 CIB4 (ENSPCOG00000005972) #31 KCNK3 (ENSPCOG00000027571) #32 SLC35F6 (ENSPCOG00000020315) #33 CENPA (ENSPCOG00000026894) #34 DPYSL5 (ENSPCOG00000015765) #35 MAPRE3 (ENSPCOG00000014462) #36 TMEM214 (ENSPCOG00000022037) #37 Bushbaby MODERN SPECIES 137 PFN4 (ENSOGAG00000004473) ENSOGAG00000028998 ##7 ITSN2 (ENSOGAG00000002146) #8 ENSOGAG00000034550 NCOA1 (ENSOGAG00000000754) #10 PTRHD1 (ENSOGAG00000000756) #11 ADCY3 (ENSOGAG00000000758) #13 ENSOGAG00000027580 DNAJC27 (ENSOGAG00000015168) #14 EFR3B (ENSOGAG00000015170) #15 POMC (ENSOGAG00000028112) #16 DNMT3A (ENSOGAG00000015182) #17 ENSOGAG00000007002 #18 ASXL2 (ENSOGAG00000002435) #19 KIF3C (ENSOGAG00000026662) #21 RAB10 (ENSOGAG00000010403) #22 ENSOGAG00000027816 ENSOGAG00000030869 #23 ENSOGAG00000005440 #24 ENSOGAG00000005444 #25 ADGRF3 (ENSOGAG00000005448) #26 SELENOI (ENSOGAG00000005453) #27 DRC1 (ENSOGAG00000005456) #28 OTOF (ENSOGAG00000006798) #29 FAM166C (ENSOGAG00000031193) #30 CIB4 (ENSOGAG00000006804) #31 KCNK3 (ENSOGAG00000006808) #32 SLC35F6 (ENSOGAG00000006810) #33 CENPA (ENSOGAG00000024154) #34 DPYSL5 (ENSOGAG00000006814) #35 MAPRE3 (ENSOGAG00000006818) #36 Haplorrhini ANCESTRAL SPECIES 15 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Tarsier MODERN SPECIES 6502 GPATCH8 (ENSTSYG00000033153) ITGA2B (ENSTSYG00000028496) RAB10 (ENSTSYG00000027835) #22 ENSTSYG00000007039 #23 HADHA (ENSTSYG00000007050) #24 ENSTSYG00000003570 #25 Simiiformes ANCESTRAL SPECIES 14 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a #24 ENSGT01030000234626.A.b.o.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Catarrhini ANCESTRAL SPECIES 17 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000010170.a.b.d ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.a ENSGT00940000154256.l.b ENSGT00940000153739.a.b #21 ENSGT00390000003860.h.b ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a #24 ENSGT01030000234626.A.b.o.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Hominoidea ANCESTRAL SPECIES 18 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000010170.a.b.d ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.a ENSGT00940000154256.l.b ENSGT00940000153739.a.b #21 ENSGT00390000003860.h.b ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a #24 ENSGT01030000234626.A.b.o.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT00940000157177.i.a ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 Hominidae ANCESTRAL SPECIES 19 ENSGT00990000205444 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000010170.a.b.d ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000154256.l.b ENSGT00940000153739.a.b #21 ENSGT00390000003860.h.b ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a #24 ENSGT01030000234626.A.b.o.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT00940000157177.i.a ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 Homo/Pan/Gorilla group ANCESTRAL SPECIES 18 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000010170.a.b.d ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000154256.l.b ENSGT00940000153739.a.b #21 ENSGT00390000003860.h.b ENSGT00940000168009 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a #24 ENSGT01030000234626.A.b.o.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT00940000157177.i.a ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 Gorilla MODERN SPECIES 14 NCOA1 (ENSGGOG00000011279) #10 PTRHD1 (ENSGGOG00000043870) #11 CENPO (ENSGGOG00000038847) #12 ADCY3 (ENSGGOG00000004078) #13 DNAJC27 (ENSGGOG00000004081) #14 ENSGGOG00000040190 EFR3B (ENSGGOG00000011045) #15 POMC (ENSGGOG00000003480) #16 DNMT3A (ENSGGOG00000012524) #17 ENSGGOG00000007679 #18 ENSGGOG00000043565 ASXL2 (ENSGGOG00000011013) #19 KIF3C (ENSGGOG00000008106) #21 ENSGGOG00000010631 ENSGGOG00000025056 RAB10 (ENSGGOG00000023707) #22 ENSGGOG00000040507 ENSGGOG00000010466 GAREM2 (ENSGGOG00000004917) #23 HADHA (ENSGGOG00000004918) #24 HADHB (ENSGGOG00000025829) #25 ADGRF3 (ENSGGOG00000011154) #26 SELENOI (ENSGGOG00000000006) #27 DRC1 (ENSGGOG00000000007) #28 OTOF (ENSGGOG00000000008) #29 FAM166C (ENSGGOG00000010712) #30 CIB4 (ENSGGOG00000010718) #31 ENSGGOG00000038547 #32 SLC35F6 (ENSGGOG00000039816) #33 CENPA (ENSGGOG00000023861) #34 ENSGGOG00000013089 Homo/Pan group ANCESTRAL SPECIES 14 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000010170.a.b.d ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000154256.l.b ENSGT00940000153739.a.b #21 ENSGT00390000003860.h.b ENSGT00940000168009 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a #24 ENSGT01030000234626.A.b.o.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Human MODERN SPECIES 11 TP53I3 (ENSG00000115129) PFN4 (ENSG00000176732) FAM228A (ENSG00000186453) ##7 ITSN2 (ENSG00000198399) #8 NCOA1 (ENSG00000084676) #10 PTRHD1 (ENSG00000184924) #11 CENPO (ENSG00000138092) #12 ADCY3 (ENSG00000138031) #13 DNAJC27 (ENSG00000115137) #14 EFR3B (ENSG00000084710) #15 POMC (ENSG00000115138) #16 DNMT3A (ENSG00000119772) #17 DTNB (ENSG00000138101) ASXL2 (ENSG00000143970) #19 KIF3C (ENSG00000084731) #21 RAB10 (ENSG00000084733) #22 GAREM2 (ENSG00000157833) #23 HADHA (ENSG00000084754) #24 HADHB (ENSG00000138029) #25 ADGRF3 (ENSG00000173567) #26 SELENOI (ENSG00000138018) #27 DRC1 (ENSG00000157856) #28 OTOF (ENSG00000115155) #29 FAM166C (ENSG00000173557) #30 CIB4 (ENSG00000157884) #31 KCNK3 (ENSG00000171303) #32 SLC35F6 (ENSG00000213699) #33 CENPA (ENSG00000115163) #34 DPYSL5 (ENSG00000157851) #35 MAPRE3 (ENSG00000084764) #36 TMEM214 (ENSG00000119777) #37 Pan ANCESTRAL SPECIES 17 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000010170.a.b.d ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000154256.l.b ENSGT00940000153739.a.b #21 ENSGT00390000003860.h.b ENSGT00940000168009 ENSGT00940000156975.u #22 ENSGT00940000164415 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a #24 ENSGT01030000234626.A.b.o.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 Chimpanzee MODERN SPECIES 14 PTRHD1 (ENSPTRG00000011716) #11 CENPO (ENSPTRG00000011717) #12 ADCY3 (ENSPTRG00000011718) #13 DNAJC27 (ENSPTRG00000011719) #14 ARPC3 (ENSPTRG00000005438) EFR3B (ENSPTRG00000011720) #15 ENSPTRG00000047695 POMC (ENSPTRG00000011721) #16 DNMT3A (ENSPTRG00000011723) #17 DTNB (ENSPTRG00000011724) ASXL2 (ENSPTRG00000011726) #19 ENSPTRG00000047905 KIF3C (ENSPTRG00000011727) #21 ENSPTRG00000052062 ENSPTRG00000040383 RAB10 (ENSPTRG00000050373) #22 ENSPTRG00000052059 GAREM2 (ENSPTRG00000011731) #23 HADHA (ENSPTRG00000011732) #24 HADHB (ENSPTRG00000011733) #25 ADGRF3 (ENSPTRG00000011734) #26 SELENOI (ENSPTRG00000011735) #27 DRC1 (ENSPTRG00000023470) #28 OTOF (ENSPTRG00000050060) #29 C2AH2orf70 (ENSPTRG00000022566) #30 CIB4 (ENSPTRG00000011738) #31 KCNK3 (ENSPTRG00000048881) #32 SLC35F6 (ENSPTRG00000033946) #33 CENPA (ENSPTRG00000011740) #34 DPYSL5 (ENSPTRG00000011741) #35 MAPRE3 (ENSPTRG00000011742) #36 Bonobo MODERN SPECIES 14 ENSPPAG00000029973 NCOA1 (ENSPPAG00000042202) #10 PTRHD1 (ENSPPAG00000035395) #11 ENSPPAG00000041965 #12 ADCY3 (ENSPPAG00000038289) #13 DNAJC27 (ENSPPAG00000031678) #14 EFR3B (ENSPPAG00000035349) #15 ENSPPAG00000028041 POMC (ENSPPAG00000038015) #16 DNMT3A (ENSPPAG00000037925) #17 DTNB (ENSPPAG00000028095) ASXL2 (ENSPPAG00000040962) #19 KIF3C (ENSPPAG00000040221) #21 ENSPPAG00000038147 ENSPPAG00000000073 RAB10 (ENSPPAG00000031403) #22 ENSPPAG00000040272 ENSPPAG00000041660 ENSPPAG00000041743 #23 HADHA (ENSPPAG00000044082) #24 HADHB (ENSPPAG00000040869) #25 SELENOI (ENSPPAG00000021435) #27 DRC1 (ENSPPAG00000030017) #28 OTOF (ENSPPAG00000038766) #29 FAM166C (ENSPPAG00000034582) #30 ENSPPAG00000039751 #31 KCNK3 (ENSPPAG00000040420) #32 SLC35F6 (ENSPPAG00000025353) #33 ENSPPAG00000030110 #34 DPYSL5 (ENSPPAG00000038863) #35 ENSPPAG00000033183 Orangutan MODERN SPECIES 14 FAM228A (ENSPPYG00000032298) ##7 ITSN2 (ENSPPYG00000012599) #8 NCOA1 (ENSPPYG00000012598) #10 PTRHD1 (ENSPPYG00000036929) #11 CENPO (ENSPPYG00000034751) #12 ADCY3 (ENSPPYG00000012595) #13 DNAJC27 (ENSPPYG00000030855) #14 EFR3B (ENSPPYG00000012593) #15 ENSPPYG00000038894 POMC (ENSPPYG00000012592) #16 DNMT3A (ENSPPYG00000012591) #17 DTNB (ENSPPYG00000012590) ASXL2 (ENSPPYG00000012589) #19 KIF3C (ENSPPYG00000012588) #21 ENSPPYG00000012587 RAB10 (ENSPPYG00000012586) #22 ENSPPYG00000040422 GAREM2 (ENSPPYG00000034864) #23 HADHA (ENSPPYG00000012583) #24 HADHB (ENSPPYG00000012582) #25 ADGRF3 (ENSPPYG00000012581) #26 SELENOI (ENSPPYG00000032296) #27 DRC1 (ENSPPYG00000012578) #28 OTOF (ENSPPYG00000012577) #29 FAM166C (ENSPPYG00000032905) #30 CIB4 (ENSPPYG00000039437) #31 KCNK3 (ENSPPYG00000037474) #32 SLC35F6 (ENSPPYG00000012573) #33 CENPA (ENSPPYG00000012572) #34 DPYSL5 (ENSPPYG00000012570) #35 MAPRE3 (ENSPPYG00000012568) #36 Gibbon MODERN SPECIES 9 NCOA1 (ENSNLEG00000000895) #10 PTRHD1 (ENSNLEG00000000990) #11 CENPO (ENSNLEG00000000994) #12 ADCY3 (ENSNLEG00000001020) #13 DNAJC27 (ENSNLEG00000001103) #14 ENSNLEG00000034960 EFR3B (ENSNLEG00000001119) #15 POMC (ENSNLEG00000001153) #16 DNMT3A (ENSNLEG00000026822) #17 ENSNLEG00000001170 #18 ASXL2 (ENSNLEG00000028738) #19 ENSNLEG00000035558 ENSNLEG00000027472 KIF3C (ENSNLEG00000001471) #21 ENSNLEG00000030085 RAB10 (ENSNLEG00000001528) #22 ENSNLEG00000033019 ENSNLEG00000032970 GAREM2 (ENSNLEG00000001585) #23 ENSNLEG00000001616 #24 HADHB (ENSNLEG00000001754) #25 ADGRF3 (ENSNLEG00000002076) #26 SELENOI (ENSNLEG00000029725) #27 DRC1 (ENSNLEG00000002135) #28 OTOF (ENSNLEG00000002149) #29 FAM166C (ENSNLEG00000002450) #30 CIB4 (ENSNLEG00000002462) #31 ENSNLEG00000019012 #32 SLC35F6 (ENSNLEG00000027135) #33 CENPA (ENSNLEG00000034937) #34 ENSNLEG00000029245 Cercopithecidae ANCESTRAL SPECIES 18 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000010170.a.b.d ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00950000182802.A.b ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.a ENSGT00940000154256.l.b ENSGT00940000153739.a.b #21 ENSGT00390000003860.h.b ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a #24 ENSGT01030000234626.A.b.o.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Cercopithecinae ANCESTRAL SPECIES 17 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00390000012679.m.a ENSGT00940000157133 #14 ENSGT00390000010170.a.b.d ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00950000182802.A.b ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.a ENSGT00940000154256.l.b ENSGT00940000153739.a.b #21 ENSGT00390000003860.h.b ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a #24 ENSGT01030000234626.A.b.o.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Vervet Monkey MODERN SPECIES 5 FAM228A (ENSCSAG00000008425) ##7 ITSN2 (ENSCSAG00000008453) #8 NCOA1 (ENSCSAG00000008479) #10 PTRHD1 (ENSCSAG00000008490) #11 CENPO (ENSCSAG00000008498) #12 ADCY3 (ENSCSAG00000008514) #13 ENSCSAG00000008524 DNAJC27 (ENSCSAG00000008536) #14 EFR3B (ENSCSAG00000008553) #15 POMC (ENSCSAG00000008563) #16 DNMT3A (ENSCSAG00000008584) #17 ENSCSAG00000008593 #17 DTNB (ENSCSAG00000008613) ASXL2 (ENSCSAG00000008663) #19 KIF3C (ENSCSAG00000008688) #21 RAB10 (ENSCSAG00000008695) #22 GAREM2 (ENSCSAG00000008714) #23 HADHA (ENSCSAG00000008736) #24 HADHB (ENSCSAG00000008753) #25 SELENOI (ENSCSAG00000008763) #27 ENSCSAG00000008771 #28 ENSCSAG00000008776 #28 OTOF (ENSCSAG00000009067) #29 FAM166C (ENSCSAG00000009234) #30 CIB4 (ENSCSAG00000009252) #31 KCNK3 (ENSCSAG00000009271) #32 SLC35F6 (ENSCSAG00000009283) #33 CENPA (ENSCSAG00000009296) #34 DPYSL5 (ENSCSAG00000009382) #35 MAPRE3 (ENSCSAG00000009421) #36 TMEM214 (ENSCSAG00000009483) #37 Cercopithecinae_a ANCESTRAL SPECIES 17 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00390000012679.m.a ENSGT00940000157133 #14 ENSGT00390000010170.a.b.d ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00950000182802.A.b ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.a ENSGT00940000154256.l.b ENSGT00940000153739.a.b #21 ENSGT00390000003860.h.b.a.a ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a #24 ENSGT01030000234626.A.b.o.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Macaca ANCESTRAL SPECIES 17 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00390000012679.m.a ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.a ENSGT00940000154256.l.b ENSGT00940000153739.a.b #21 ENSGT00390000003860.h.b.a.a ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a #24 ENSGT01030000234626.A.b.o.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693.k #37 Pig-tailed macaque MODERN SPECIES 561 NCOA1 (ENSMNEG00000039179) #10 PTRHD1 (ENSMNEG00000035044) #11 CENPO (ENSMNEG00000044763) #12 ADCY3 (ENSMNEG00000045167) #13 ENSMNEG00000027756 DNAJC27 (ENSMNEG00000035671) #14 POMC (ENSMNEG00000025401) #16 EFR3B (ENSMNEG00000033229) #15 DNMT3A (ENSMNEG00000038454) #17 ENSMNEG00000032051 #18 ENSMNEG00000041605 ENSMNEG00000044519 ASXL2 (ENSMNEG00000030154) #19 KIF3C (ENSMNEG00000032633) #21 ENSMNEG00000031146 RAB10 (ENSMNEG00000028491) #22 GAREM2 (ENSMNEG00000034057) #23 HADHA (ENSMNEG00000044721) #24 HADHB (ENSMNEG00000044887) #25 ADGRF3 (ENSMNEG00000031948) #26 SELENOI (ENSMNEG00000010725) #27 DRC1 (ENSMNEG00000044674) #28 OTOF (ENSMNEG00000040565) #29 FAM166C (ENSMNEG00000001318) #30 CIB4 (ENSMNEG00000037140) #31 KCNK3 (ENSMNEG00000044744) #32 SLC35F6 (ENSMNEG00000038432) #33 CENPA (ENSMNEG00000025072) #34 DPYSL5 (ENSMNEG00000033753) #35 MAPRE3 (ENSMNEG00000034824) #36 ENSMNEG00000019129 #37 Macaca_a ANCESTRAL SPECIES 15 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000161627.a.a.a.b.b.b.b.a.b.a.b.b ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT01100000263493.a.b.a.a.a.b.a.a.b.b.b.b.c.b.a ENSGT00940000153739.a.b #21 ENSGT00390000003860.h.b.a.a ENSGT00940000156975.u #22 ENSGT00940000164709.a.b.b.a.b.b.a.b.a.a.a.b ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a #24 ENSGT01030000234626.A.b.o.b #25 ENSGT00940000161541 #26 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693.k #37 Rhesus MODERN SPECIES 4 NCOA1 (ENSMMUG00000020838) #10 PTRHD1 (ENSMMUG00000060020) #11 CENPO (ENSMMUG00000009599) #12 ADCY3 (ENSMMUG00000009600) #13 DNAJC27 (ENSMMUG00000009603) #14 EFR3B (ENSMMUG00000016461) #15 POMC (ENSMMUG00000055135) #16 ENSMMUG00000061252 ENSMMUG00000056636 ENSMMUG00000050208 DNMT3A (ENSMMUG00000013565) #17 DTNB (ENSMMUG00000016587) ASXL2 (ENSMMUG00000001377) #19 ENSMMUG00000062814 KIF3C (ENSMMUG00000019293) #21 RAB10 (ENSMMUG00000039805) #22 ENSMMUG00000052700 ENSMMUG00000059135 GAREM2 (ENSMMUG00000004378) #23 HADHA (ENSMMUG00000004380) #24 HADHB (ENSMMUG00000004381) #25 ADGRF3 (ENSMMUG00000004383) #26 SELENOI (ENSMMUG00000014287) #28 OTOF (ENSMMUG00000014292) #29 FAM166C (ENSMMUG00000014296) #30 CIB4 (ENSMMUG00000014297) #31 KCNK3 (ENSMMUG00000056208) #32 SLC35F6 (ENSMMUG00000040310) #33 CENPA (ENSMMUG00000015934) #34 DPYSL5 (ENSMMUG00000019731) #35 MAPRE3 (ENSMMUG00000019732) #36 Crab-eating macaque MODERN SPECIES 4 PTRHD1 (ENSMFAG00000040267) #11 CENPO (ENSMFAG00000031589) #12 ADCY3 (ENSMFAG00000038483) #13 DNAJC27 (ENSMFAG00000061704) #14 EFR3B (ENSMFAG00000035813) #15 POMC (ENSMFAG00000000551) #16 ENSMFAG00000063119 ENSMFAG00000048533 DNMT3A (ENSMFAG00000031180) #17 ENSMFAG00000038698 #18 ENSMFAG00000053114 ASXL2 (ENSMFAG00000039252) #19 ENSMFAG00000049777 KIF3C (ENSMFAG00000002881) #21 ENSMFAG00000044444 RAB10 (ENSMFAG00000001674) #22 ENSMFAG00000060925 HADHA (ENSMFAG00000039817) #24 ENSMFAG00000053961 HADHB (ENSMFAG00000031252) #25 ADGRF3 (ENSMFAG00000040027) #26 DRC1 (ENSMFAG00000043768) #28 OTOF (ENSMFAG00000043966) #29 FAM166C (ENSMFAG00000042764) #30 CIB4 (ENSMFAG00000036825) #31 KCNK3 (ENSMFAG00000060076) #32 CENPA (ENSMFAG00000045875) #34 SLC35F6 (ENSMFAG00000029510) #33 DPYSL5 (ENSMFAG00000029591) #35 MAPRE3 (ENSMFAG00000000279) #36 ENSMFAG00000045975 #37 Cercopithecinae_b ANCESTRAL SPECIES 15 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00390000012679.m.a ENSGT00940000157133 #14 ENSGT00390000010170.a.b.d ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00950000182802.A.b ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.a ENSGT00940000153739.a.b #21 ENSGT00390000003860.h.b.a.a ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a #24 ENSGT01030000234626.A.b.o.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Olive baboon MODERN SPECIES 5 ITSN2 (ENSPANG00000020766) #8 NCOA1 (ENSPANG00000016229) #10 ENSPANG00000000336 PTRHD1 (ENSPANG00000006781) #11 CENPO (ENSPANG00000018043) #12 ADCY3 (ENSPANG00000021654) #13 DNAJC27 (ENSPANG00000023972) #14 EFR3B (ENSPANG00000004979) #15 POMC (ENSPANG00000041108) #16 DNMT3A (ENSPANG00000009987) #17 DTNB (ENSPANG00000017000) ASXL2 (ENSPANG00000007355) #19 KIF3C (ENSPANG00000000518) #21 ENSPANG00000035790 ENSPANG00000049061 RAB10 (ENSPANG00000009860) #22 GAREM2 (ENSPANG00000026153) #23 HADHA (ENSPANG00000019056) #24 HADHB (ENSPANG00000018040) #25 ADGRF3 (ENSPANG00000016225) #26 SELENOI (ENSPANG00000011258) #27 DRC1 (ENSPANG00000020443) #28 OTOF (ENSPANG00000019226) #29 FAM166C (ENSPANG00000007617) #30 CIB4 (ENSPANG00000014555) #31 KCNK3 (ENSPANG00000009018) #32 SLC35F6 (ENSPANG00000030429) #33 CENPA (ENSPANG00000026487) #34 DPYSL5 (ENSPANG00000000632) #35 MAPRE3 (ENSPANG00000014553) #36 TMEM214 (ENSPANG00000009921) #37 Cercopithecinae_d ANCESTRAL SPECIES 23 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00390000012679.m.a ENSGT00940000157133 #14 ENSGT00390000010170.a.b.d ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00950000182802.A.b ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.a ENSGT00940000153739.a.b #21 ENSGT00390000003860.h.b.a.a ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a #24 ENSGT01030000234626.A.b.o.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Drill MODERN SPECIES 340 FAM228A (ENSMLEG00000011620) ##7 ITSN2 (ENSMLEG00000033491) #8 NCOA1 (ENSMLEG00000032601) #10 PTRHD1 (ENSMLEG00000030314) #11 CENPO (ENSMLEG00000041293) #12 ADCY3 (ENSMLEG00000037538) #13 ENSMLEG00000029014 DNAJC27 (ENSMLEG00000029813) #14 EFR3B (ENSMLEG00000031167) #15 POMC (ENSMLEG00000009557) #16 DNMT3A (ENSMLEG00000034751) #17 ENSMLEG00000035719 #18 ENSMLEG00000043138 ASXL2 (ENSMLEG00000042828) #19 KIF3C (ENSMLEG00000036529) #21 RAB10 (ENSMLEG00000039320) #22 GAREM2 (ENSMLEG00000032967) #23 HADHA (ENSMLEG00000022425) #24 ENSMLEG00000038228 HADHB (ENSMLEG00000003668) #25 ADGRF3 (ENSMLEG00000036680) #26 SELENOI (ENSMLEG00000041082) #27 DRC1 (ENSMLEG00000037987) #28 OTOF (ENSMLEG00000027728) #29 FAM166C (ENSMLEG00000036937) #30 CIB4 (ENSMLEG00000028464) #31 KCNK3 (ENSMLEG00000038319) #32 SLC35F6 (ENSMLEG00000044250) #33 CENPA (ENSMLEG00000039231) #34 DPYSL5 (ENSMLEG00000041344) #35 MAPRE3 (ENSMLEG00000032860) #36 Sooty mangabey MODERN SPECIES 542 PTRHD1 (ENSCATG00000033690) #11 CENPO (ENSCATG00000035791) #12 ADCY3 (ENSCATG00000006719) #13 ENSCATG00000028816 DNAJC27 (ENSCATG00000029231) #14 ENSCATG00000043764 EFR3B (ENSCATG00000000318) #15 POMC (ENSCATG00000041120) #16 ENSCATG00000019562 DNMT3A (ENSCATG00000003150) #17 ENSCATG00000031389 #18 ENSCATG00000013048 ASXL2 (ENSCATG00000041653) #19 KIF3C (ENSCATG00000029067) #21 ENSCATG00000030449 RAB10 (ENSCATG00000002631) #22 GAREM2 (ENSCATG00000040150) #23 HADHA (ENSCATG00000030823) #24 HADHB (ENSCATG00000037244) #25 ADGRF3 (ENSCATG00000036098) #26 SELENOI (ENSCATG00000019121) #27 DRC1 (ENSCATG00000042753) #28 OTOF (ENSCATG00000043960) #29 FAM166C (ENSCATG00000038758) #30 CIB4 (ENSCATG00000034446) #31 KCNK3 (ENSCATG00000043870) #32 SLC35F6 (ENSCATG00000044941) #33 CENPA (ENSCATG00000037376) #34 DPYSL5 (ENSCATG00000021528) #35 MAPRE3 (ENSCATG00000036386) #36 TMEM214 (ENSCATG00000039251) #37 Rhinopithecus ANCESTRAL SPECIES 47 ENSGT00940000162581 ENSGT00590000083139 ENSGT00390000009688 ENSGT00940000160140.b ENSGT00390000013092 ENSGT00950000182945.b.a.a.b.b.b ENSGT00390000016811 #16 ENSGT00950000182802.A.b ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.a ENSGT00940000153739.a.b #21 ENSGT00390000003860.h.b ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a #24 ENSGT01030000234626.A.b.o.b #25 ENSGT00670000098076.i.a.b.g.b ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B.o #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 Golden snub-nosed monkey MODERN SPECIES 2393 TDRD15 (ENSRROG00000012190) APOB (ENSRROG00000034792) LDAH (ENSRROG00000042894) GDF7 (ENSRROG00000032206) HS1BP3 (ENSRROG00000045342) RHOB (ENSRROG00000027959) POMC (ENSRROG00000045388) #16 ENSRROG00000002529 DNMT3A (ENSRROG00000033151) #17 ENSRROG00000041965 #18 ASXL2 (ENSRROG00000034489) #19 ENSRROG00000000064 KIF3C (ENSRROG00000045700) #21 RAB10 (ENSRROG00000028647) #22 GAREM2 (ENSRROG00000034425) #23 HADHA (ENSRROG00000032860) #24 HADHB (ENSRROG00000025585) #25 ENSRROG00000036092 ADGRF3 (ENSRROG00000037215) #26 SELENOI (ENSRROG00000030657) #27 DRC1 (ENSRROG00000045724) #28 ENSRROG00000036843 OTOF (ENSRROG00000030813) #29 Black snub-nosed monkey MODERN SPECIES 560 LDAH (ENSRBIG00000039351) ENSRBIG00000038314 GDF7 (ENSRBIG00000031200) HS1BP3 (ENSRBIG00000031881) RHOB (ENSRBIG00000023783) ENSRBIG00000022710 POMC (ENSRBIG00000014218) #16 ENSRBIG00000029807 DNMT3A (ENSRBIG00000031793) #17 ENSRBIG00000033599 #18 ASXL2 (ENSRBIG00000030906) #19 ENSRBIG00000036540 ENSRBIG00000038397 KIF3C (ENSRBIG00000018579) #21 ENSRBIG00000036827 RAB10 (ENSRBIG00000044561) #22 GAREM2 (ENSRBIG00000030250) #23 HADHA (ENSRBIG00000030017) #24 HADHB (ENSRBIG00000024676) #25 ENSRBIG00000010956 ADGRF3 (ENSRBIG00000035232) #26 SELENOI (ENSRBIG00000026035) #27 DRC1 (ENSRBIG00000037025) #28 OTOF (ENSRBIG00000027377) #29 FAM166C (ENSRBIG00000041010) #30 CIB4 (ENSRBIG00000044606) #31 KCNK3 (ENSRBIG00000039484) #32 SLC35F6 (ENSRBIG00000039090) #33 CENPA (ENSRBIG00000043662) #34 DPYSL5 (ENSRBIG00000031460) #35 ENSRBIG00000044902 Platyrrhini ANCESTRAL SPECIES 45 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a #24 ENSGT01030000234626.A.b.o.a #25 Mas night monkey MODERN SPECIES 378 KIF3C (ENSANAG00000034291) #21 RAB10 (ENSANAG00000021257) #22 ENSANAG00000034719 GAREM2 (ENSANAG00000037139) #23 HADHA (ENSANAG00000029684) #24 ENSANAG00000027802 #25 Cebidae ANCESTRAL SPECIES 40 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a.d #24 ENSGT00940000154677.g.a.c #24 ENSGT01030000234626.A.b.o.a #25 Marmoset MODERN SPECIES 5 TMEM214 (ENSCJAG00000001317) #37 MAPRE3 (ENSCJAG00000001341) #36 DPYSL5 (ENSCJAG00000001352) #35 ENSCJAG00000075557 CENPA (ENSCJAG00000058840) #34 SLC35F6 (ENSCJAG00000071257) #33 KCNK3 (ENSCJAG00000052158) #32 CIB4 (ENSCJAG00000001393) #31 FAM166C (ENSCJAG00000001406) #30 OTOF (ENSCJAG00000001409) #29 DRC1 (ENSCJAG00000001461) #28 ENSCJAG00000086527 SELENOI (ENSCJAG00000001477) #27 ADGRF3 (ENSCJAG00000001491) #26 KIF3C (ENSCJAG00000008138) #21 RAB10 (ENSCJAG00000056072) #22 ENSCJAG00000070963 GAREM2 (ENSCJAG00000008091) #23 HADHA (ENSCJAG00000008008) #24 ENSCJAG00000007943 #25 ENSCJAG00000078565 ENSCJAG00000072220 ASXL2 (ENSCJAG00000008396) #19 ENSCJAG00000008281 #18 ENSCJAG00000084719 DNMT3A (ENSCJAG00000008172) #17 POMC (ENSCJAG00000045765) #16 EFR3B (ENSCJAG00000008127) #15 ENSCJAG00000047462 ENSCJAG00000073498 DNAJC27 (ENSCJAG00000008094) #14 Cebidae_a ANCESTRAL SPECIES 46 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00950000183098.b.a.b.ib.a.a.a.a.a ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.g.a.c #24 ENSGT01030000234626.A.b.o.a #25 Capuchin MODERN SPECIES 1 ADCY3 (ENSCCAG00000021802) #13 DNAJC27 (ENSCCAG00000021410) #14 ENSCCAG00000025067 EFR3B (ENSCCAG00000022207) #15 POMC (ENSCCAG00000030547) #16 DNMT3A (ENSCCAG00000037628) #17 ENSCCAG00000035816 #18 ASXL2 (ENSCCAG00000028549) #19 ENSCCAG00000033575 ENSCCAG00000036729 ENSCCAG00000037788 ENSCCAG00000029919 ENSCCAG00000024370 KIF3C (ENSCCAG00000035056) #21 ENSCCAG00000027276 RAB10 (ENSCCAG00000031920) #22 GAREM2 (ENSCCAG00000037792) #23 ENSCCAG00000024976 #24 HADHB (ENSCCAG00000029773) #25 ENSCCAG00000036739 Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 113 PTRHD1 (ENSSBOG00000031751) #11 CENPO (ENSSBOG00000023221) #12 ENSSBOG00000007440 ADCY3 (ENSSBOG00000022082) #13 DNAJC27 (ENSSBOG00000021759) #14 EFR3B (ENSSBOG00000026571) #15 POMC (ENSSBOG00000030918) #16 DNMT3A (ENSSBOG00000027618) #17 ENSSBOG00000023696 #18 ENSSBOG00000022145 ASXL2 (ENSSBOG00000001902) #19 ENSSBOG00000026562 ENSSBOG00000031056 KIF3C (ENSSBOG00000025038) #21 ENSSBOG00000023403 RAB10 (ENSSBOG00000034188) #22 GAREM2 (ENSSBOG00000020309) #23 ENSSBOG00000032851 #24 ENSSBOG00000024755 #25 Bolivian squirrel monkey MODERN SPECIES 70 COL4A2 (ENSSBOG00000022396) COL4A1 (ENSSBOG00000035112) IRS2 (ENSSBOG00000033562) MYO16 (ENSSBOG00000036268) TNFSF13B (ENSSBOG00000033235) ABHD13 (ENSSBOG00000019782) LIG4 (ENSSBOG00000019029) ENSSBOG00000024651 ENSSBOG00000023659 ENSSBOG00000035667 NALF1 (ENSSBOG00000025953) ENSSBOG00000021398 ARGLU1 (ENSSBOG00000025713) EFNB2 (ENSSBOG00000030780) ENSSBOG00000021042 ENSSBOG00000025314 #22 SLC10A2 (ENSSBOG00000033035) ENSSBOG00000027930 METTL21EP (ENSSBOG00000032455) ENSSBOG00000024890 POGLUT2 (ENSSBOG00000019020) TEX30 (ENSSBOG00000021338) ENSSBOG00000018830 METTL21C (ENSSBOG00000025136) TPP2 (ENSSBOG00000019200) ENSSBOG00000028923 FGF14 (ENSSBOG00000033114) ENSSBOG00000017267 ITGBL1 (ENSSBOG00000036065) NALCN (ENSSBOG00000026898) TMTC4 (ENSSBOG00000024986) Laurasiatheria ANCESTRAL SPECIES 13 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00960000189637 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000156975.u #22 Common shrew MODERN SPECIES 7157 RAB10 (ENSSARG00000000945) #22 Laurasiatheria_a ANCESTRAL SPECIES 17 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00960000189637 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Artiodactyla ANCESTRAL SPECIES 16 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000164632.b ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Suina ANCESTRAL SPECIES 13 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Chacoan peccary MODERN SPECIES 776 FAM228B (ENSCWAG00000004823) #7 ENSCWAG00000004843 ##7 ENSCWAG00000004865 ITSN2 (ENSCWAG00000004911) #8 NCOA1 (ENSCWAG00000005236) #10 PTRHD1 (ENSCWAG00000005319) #11 CENPO (ENSCWAG00000005341) #12 ADCY3 (ENSCWAG00000005376) #13 DNAJC27 (ENSCWAG00000005420) #14 EFR3B (ENSCWAG00000005505) #15 POMC (ENSCWAG00000005810) #16 DNMT3A (ENSCWAG00000005845) #17 DTNB (ENSCWAG00000006032) ASXL2 (ENSCWAG00000008355) #19 KIF3C (ENSCWAG00000008496) #21 RAB10 (ENSCWAG00000008575) #22 GAREM2 (ENSCWAG00000008629) #23 HADHA (ENSCWAG00000008770) #24 HADHB (ENSCWAG00000008886) #25 ADGRF3 (ENSCWAG00000009293) #26 SELENOI (ENSCWAG00000009999) #27 DRC1 (ENSCWAG00000010039) #28 OTOF (ENSCWAG00000010240) #29 FAM166C (ENSCWAG00000011886) #30 CIB4 (ENSCWAG00000011940) #31 KCNK3 (ENSCWAG00000012027) #32 SLC35F6 (ENSCWAG00000012059) #33 CENPA (ENSCWAG00000012096) #34 DPYSL5 (ENSCWAG00000012185) #35 MAPRE3 (ENSCWAG00000012295) #36 TMEM214 (ENSCWAG00000012344) #37 Pig MODERN SPECIES 11 FAM228B (ENSSSCG00000008584) #7 ENSSSCG00000008582 ##7 ITSN2 (ENSSSCG00000008583) #8 NCOA1 (ENSSSCG00000008581) #10 CENPO (ENSSSCG00000055702) #12 ADCY3 (ENSSSCG00000008578) #13 DNAJC27 (ENSSSCG00000008577) #14 EFR3B (ENSSSCG00000022933) #15 ENSSSCG00000021155 #16 DNMT3A (ENSSSCG00000029413) #17 ENSSSCG00000008576 #18 ENSSSCG00000051169 ASXL2 (ENSSSCG00000008575) #19 KIF3C (ENSSSCG00000008574) #21 ENSSSCG00000058357 RAB10 (ENSSSCG00000008573) #22 GAREM2 (ENSSSCG00000008572) #23 HADHA (ENSSSCG00000008571) #24 ENSSSCG00000033644 HADHB (ENSSSCG00000008569) #25 ADGRF3 (ENSSSCG00000008570) #26 SELENOI (ENSSSCG00000030643) #27 DRC1 (ENSSSCG00000008568) #28 ENSSSCG00000022357 OTOF (ENSSSCG00000037751) #29 FAM166C (ENSSSCG00000008565) #30 CIB4 (ENSSSCG00000008564) #31 KCNK3 (ENSSSCG00000008563) #32 SLC35F6 (ENSSSCG00000008562) #33 CENPA (ENSSSCG00000038543) #34 DPYSL5 (ENSSSCG00000008560) #35 Artiodactyla_a ANCESTRAL SPECIES 15 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000164632.b ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Camelidae ANCESTRAL SPECIES 12 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Arabian camel MODERN SPECIES 6 FAM228B (ENSCDRG00005008179) #7 ENSCDRG00005008220 ##7 ITSN2 (ENSCDRG00005008345) #8 NCOA1 (ENSCDRG00005008961) #10 PTRHD1 (ENSCDRG00005009361) #11 CENPO (ENSCDRG00005009418) #12 ADCY3 (ENSCDRG00005009564) #13 ENSCDRG00005009686 DNAJC27 (ENSCDRG00005009711) #14 EFR3B (ENSCDRG00005009818) #15 ENSCDRG00005010039 #16 DNMT3A (ENSCDRG00005010068) #17 ENSCDRG00005010397 #18 ASXL2 (ENSCDRG00005011334) #19 KIF3C (ENSCDRG00005011518) #21 RAB10 (ENSCDRG00005011600) #22 GAREM2 (ENSCDRG00005011666) #23 HADHA (ENSCDRG00005011749) #24 HADHB (ENSCDRG00005011980) #25 ADGRF3 (ENSCDRG00005012247) #26 ENSCDRG00005012380 SELENOI (ENSCDRG00005012423) #27 DRC1 (ENSCDRG00005012478) #28 OTOF (ENSCDRG00005012657) #29 FAM166C (ENSCDRG00005012972) #30 CIB4 (ENSCDRG00005013022) #31 KCNK3 (ENSCDRG00005013127) #32 SLC35F6 (ENSCDRG00005013158) #33 CENPA (ENSCDRG00005013201) #34 DPYSL5 (ENSCDRG00005013299) #35 MAPRE3 (ENSCDRG00005006682) #36 Alpaca MODERN SPECIES 3040 RAB10 (ENSVPAG00000002641) #22 ENSVPAG00000002642 #23 HADHA (ENSVPAG00000002645) #24 HADHB (ENSVPAG00000002646) #25 SELENOI (ENSVPAG00000002651) #27 DRC1 (ENSVPAG00000002655) #28 ENSVPAG00000002656 #29 ENSVPAG00000002661 #31 Artiodactyla_b ANCESTRAL SPECIES 14 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000164632.b ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Pecora ANCESTRAL SPECIES 5 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000164632.b ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B.m.a #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Yarkand deer MODERN SPECIES 2 ENSCHYG00000015795 FAM228B (ENSCHYG00000015709) #7 ENSCHYG00000015598 ##7 ITSN2 (ENSCHYG00000014839) #8 NCOA1 (ENSCHYG00000014313) #10 PTRHD1 (ENSCHYG00000014175) #11 CENPO (ENSCHYG00000014066) #12 ADCY3 (ENSCHYG00000013932) #13 DNAJC27 (ENSCHYG00000013784) #14 EFR3B (ENSCHYG00000013292) #15 POMC (ENSCHYG00000013191) #16 DNMT3A (ENSCHYG00000012556) #17 ENSCHYG00000011641 #18 ASXL2 (ENSCHYG00000011494) #19 KIF3C (ENSCHYG00000011405) #21 RAB10 (ENSCHYG00000011347) #22 GAREM2 (ENSCHYG00000011311) #23 HADHA (ENSCHYG00000010003) #24 HADHB (ENSCHYG00000009640) #25 ADGRF3 (ENSCHYG00000009487) #26 SELENOI (ENSCHYG00000009378) #27 DRC1 (ENSCHYG00000009228) #28 OTOF (ENSCHYG00000008676) #29 FAM166C (ENSCHYG00000008639) #30 CIB4 (ENSCHYG00000008562) #31 KCNK3 (ENSCHYG00000008547) #32 SLC35F6 (ENSCHYG00000008502) #33 ENSCHYG00000008434 #34 DPYSL5 (ENSCHYG00000008359) #35 MAPRE3 (ENSCHYG00000008266) #36 TMEM214 (ENSCHYG00000008158) #37 Percora_a ANCESTRAL SPECIES 13 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000164632.b ENSGT00940000155936.b.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B.m.a #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 240 PFN4 (ENSMMSG00000003409) ENSMMSG00000003424 ##7 ITSN2 (ENSMMSG00000003485) #8 NCOA1 (ENSMMSG00000003674) #10 ENSMMSG00000003745 #11 CENPO (ENSMMSG00000003754) #12 ADCY3 (ENSMMSG00000003774) #13 DNAJC27 (ENSMMSG00000003798) #14 EFR3B (ENSMMSG00000003852) #15 POMC (ENSMMSG00000003919) #16 ENSMMSG00000003931 DNMT3A (ENSMMSG00000003949) #17 ENSMMSG00000004026 #18 ASXL2 (ENSMMSG00000004131) #19 KIF3C (ENSMMSG00000004152) #21 ENSMMSG00000004163 #22 GAREM2 (ENSMMSG00000004177) #23 HADHA (ENSMMSG00000004193) #24 HADHB (ENSMMSG00000004251) #25 ADGRF3 (ENSMMSG00000004296) #26 SELENOI (ENSMMSG00000004311) #27 ENSMMSG00000004719 #28 ENSMMSG00000004743 #28 OTOF (ENSMMSG00000004848) #29 FAM166C (ENSMMSG00000005676) #30 CIB4 (ENSMMSG00000005697) #31 KCNK3 (ENSMMSG00000005730) #32 SLC35F6 (ENSMMSG00000005749) #33 ENSMMSG00000005795 #34 DPYSL5 (ENSMMSG00000005856) #35 MAPRE3 (ENSMMSG00000005915) #36 Siberian musk deer MODERN SPECIES 124 KLK5 (ENSMMSG00000011181) KLK6 (ENSMMSG00000011139) KLK7 (ENSMMSG00000011113) KLK8 (ENSMMSG00000011037) KLK9 (ENSMMSG00000011004) KLK10 (ENSMMSG00000010981) KLK11 (ENSMMSG00000010918) KLK12 (ENSMMSG00000010859) KLK13 (ENSMMSG00000010806) KLK14 (ENSMMSG00000010757) ENSMMSG00000010734 ENSMMSG00000010702 ENSMMSG00000010653 ENSMMSG00000010479 ENSMMSG00000010271 ENSMMSG00000010243 #22 ENSMMSG00000010189 ENSMMSG00000010138 IGLON5 (ENSMMSG00000010098) VSIG10L (ENSMMSG00000010066) ETFB (ENSMMSG00000010038) CLDND2 (ENSMMSG00000010003) NKG7 (ENSMMSG00000009969) LIM2 (ENSMMSG00000009940) C19orf84 (ENSMMSG00000009920) ENSMMSG00000009862 ENSMMSG00000009678 ENSMMSG00000009641 ENSMMSG00000009541 ZNF175 (ENSMMSG00000009519) ENSMMSG00000009506 Bovidae ANCESTRAL SPECIES 5 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000164632.b ENSGT00940000155936.b.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B.m.a #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Caprinae ANCESTRAL SPECIES 9 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b.bc #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B.m.a #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Goat MODERN SPECIES 2 FAM228B (ENSCHIG00000022823) #7 ENSCHIG00000012771 ##7 ITSN2 (ENSCHIG00000012898) #8 NCOA1 (ENSCHIG00000016656) #10 PTRHD1 (ENSCHIG00000014757) #11 ENSCHIG00000014194 #12 ADCY3 (ENSCHIG00000025812) #13 DNAJC27 (ENSCHIG00000013821) #14 EFR3B (ENSCHIG00000013224) #15 POMC (ENSCHIG00000024414) #16 DNMT3A (ENSCHIG00000014247) #17 ENSCHIG00000010663 #18 ASXL2 (ENSCHIG00000023616) #19 ENSCHIG00000009652 KIF3C (ENSCHIG00000005084) #21 RAB10 (ENSCHIG00000007930) #22 GAREM2 (ENSCHIG00000022994) #23 HADHA (ENSCHIG00000022677) #24 HADHB (ENSCHIG00000024735) #25 ENSCHIG00000023283 ENSCHIG00000013868 #27 DRC1 (ENSCHIG00000001933) #28 FAM166C (ENSCHIG00000017427) #30 OTOF (ENSCHIG00000018439) #29 CIB4 (ENSCHIG00000016186) #31 KCNK3 (ENSCHIG00000026730) #32 SLC35F6 (ENSCHIG00000021255) #33 ENSCHIG00000010550 #34 DPYSL5 (ENSCHIG00000026005) #35 MAPRE3 (ENSCHIG00000022223) #36 TMEM214 (ENSCHIG00000007752) #37 Rambouillet Sheep MODERN SPECIES 19 FAM228B (ENSOARG00020020153) #7 ENSOARG00020020223 ##7 ITSN2 (ENSOARG00020020291) #8 NCOA1 (ENSOARG00020020912) #10 PTRHD1 (ENSOARG00020021146) #11 CENPO (ENSOARG00020021166) #12 ADCY3 (ENSOARG00020021236) #13 DNAJC27 (ENSOARG00020021503) #14 EFR3B (ENSOARG00020021643) #15 POMC (ENSOARG00020022037) #16 DNMT3A (ENSOARG00020022113) #17 ENSOARG00020022321 #18 ASXL2 (ENSOARG00020022527) #19 KIF3C (ENSOARG00020022724) #21 ENSOARG00020000209 RAB10 (ENSOARG00020000225) #22 GAREM2 (ENSOARG00020000249) #23 HADHA (ENSOARG00020000289) #24 HADHB (ENSOARG00020000348) #25 ADGRF3 (ENSOARG00020000413) #26 SELENOI (ENSOARG00020000449) #27 DRC1 (ENSOARG00020000494) #28 OTOF (ENSOARG00020000652) #29 FAM166C (ENSOARG00020001012) #30 CIB4 (ENSOARG00020001043) #31 KCNK3 (ENSOARG00020001063) #32 SLC35F6 (ENSOARG00020001108) #33 CENPA (ENSOARG00020001123) #34 DPYSL5 (ENSOARG00020001155) #35 MAPRE3 (ENSOARG00020001192) #36 TMEM214 (ENSOARG00020001236) #37 Bovinae ANCESTRAL SPECIES 4 ENSGT00530000064185.b ##7 ENSGT00940000164632.b ENSGT00940000155936.b.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00960000190709 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B.m.a.a.b #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Bos ANCESTRAL SPECIES 5 ENSGT00940000164632.b ENSGT00940000155936.b.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00960000190709 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00950000183198.c.b.b.d ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT01100000263481.n.a.a.a.b.b.b.b.b.b.b.a ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B.m.a.a.b #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 Bos_b ANCESTRAL SPECIES 16 ENSGT00940000164632.b ENSGT00940000155936.b.b #8 ENSGT01100000263480.a.a.b.a.b.a.a.b.a.b.a.b ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00960000190709 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT01100000263481.n.a.a.a.b.b.b.b.b.b.b.a ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B.m.a.a.b #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 Cow MODERN SPECIES 2 ENSBTAG00000051942 ITSN2 (ENSBTAG00000023172) #8 ENSBTAG00000049243 NCOA1 (ENSBTAG00000015007) #10 PTRHD1 (ENSBTAG00000015012) #11 CENPO (ENSBTAG00000015014) #12 ADCY3 (ENSBTAG00000018705) #13 DNAJC27 (ENSBTAG00000018239) #14 EFR3B (ENSBTAG00000007888) #15 POMC (ENSBTAG00000007897) #16 ENSBTAG00000054828 DNMT3A (ENSBTAG00000021143) #17 DTNB (ENSBTAG00000021072) #18 ASXL2 (ENSBTAG00000019983) #19 KIF3C (ENSBTAG00000019138) #21 RAB10 (ENSBTAG00000000985) #22 GAREM2 (ENSBTAG00000015037) #23 ENSBTAG00000054613 HADHA (ENSBTAG00000015038) #24 HADHB (ENSBTAG00000010083) #25 ADGRF3 (ENSBTAG00000005736) #26 ENSBTAG00000017330 SELENOI (ENSBTAG00000007837) #27 DRC1 (ENSBTAG00000009649) #28 OTOF (ENSBTAG00000009650) #29 FAM166C (ENSBTAG00000031150) #30 CIB4 (ENSBTAG00000005041) #31 KCNK3 (ENSBTAG00000051102) #32 SLC35F6 (ENSBTAG00000018761) #33 CENPA (ENSBTAG00000023938) #34 DPYSL5 (ENSBTAG00000018576) #35 Bos_a ANCESTRAL SPECIES 6 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00960000190709 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT01100000263481.n.a.a.a.b.b.b.b.b.b.b.a ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B.m.a.a.b #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 Wild yak MODERN SPECIES 752 ENSBMUG00000006172 ##7 ITSN2 (ENSBMUG00000006272) #8 NCOA1 (ENSBMUG00000006387) #10 PTRHD1 (ENSBMUG00000006473) #11 CENPO (ENSBMUG00000006492) #12 ADCY3 (ENSBMUG00000006526) #13 DNAJC27 (ENSBMUG00000006549) #14 EFR3B (ENSBMUG00000006619) #15 POMC (ENSBMUG00000006633) #16 ENSBMUG00000006637 DNMT3A (ENSBMUG00000006671) #17 ENSBMUG00000006789 #18 ASXL2 (ENSBMUG00000006985) #19 ENSBMUG00000007004 KIF3C (ENSBMUG00000007015) #21 RAB10 (ENSBMUG00000007030) #22 GAREM2 (ENSBMUG00000007039) #23 HADHA (ENSBMUG00000007070) #24 HADHB (ENSBMUG00000007151) #25 ADGRF3 (ENSBMUG00000007181) #26 SELENOI (ENSBMUG00000007207) #27 DRC1 (ENSBMUG00000007424) #28 OTOF (ENSBMUG00000007996) #29 FAM166C (ENSBMUG00000008127) #30 CIB4 (ENSBMUG00000008137) #31 KCNK3 (ENSBMUG00000008150) #32 SLC35F6 (ENSBMUG00000008165) #33 ENSBMUG00000008176 #34 DPYSL5 (ENSBMUG00000008186) #35 MAPRE3 (ENSBMUG00000008220) #36 TMEM214 (ENSBMUG00000008301) #37 Domestic yak MODERN SPECIES 28 ENSBGRG00000017956 NCOA1 (ENSBGRG00000017177) #10 PTRHD1 (ENSBGRG00000017120) #11 CENPO (ENSBGRG00000017015) #12 ADCY3 (ENSBGRG00000016642) #13 DNAJC27 (ENSBGRG00000016424) #14 EFR3B (ENSBGRG00000015799) #15 ENSBGRG00000015740 #16 ENSBGRG00000015691 DNMT3A (ENSBGRG00000015176) #17 DTNB (ENSBGRG00000014178) ASXL2 (ENSBGRG00000013739) #19 ENSBGRG00000013699 ENSBGRG00000013690 KIF3C (ENSBGRG00000013558) #21 RAB10 (ENSBGRG00000013498) #22 GAREM2 (ENSBGRG00000013458) #23 ENSBGRG00000013436 HADHA (ENSBGRG00000012469) #24 HADHB (ENSBGRG00000011944) #25 ADGRF3 (ENSBGRG00000011740) #26 SELENOI (ENSBGRG00000011521) #27 DRC1 (ENSBGRG00000011341) #28 OTOF (ENSBGRG00000011136) #29 FAM166C (ENSBGRG00000011044) #30 CIB4 (ENSBGRG00000010921) #31 KCNK3 (ENSBGRG00000010821) #32 SLC35F6 (ENSBGRG00000010740) #33 ENSBGRG00000010562 #34 DPYSL5 (ENSBGRG00000012850) #35 MAPRE3 (ENSBGRG00000012781) #36 American bison MODERN SPECIES 3068 ENSBBBG00000018716 ##7 ITSN2 (ENSBBBG00000018695) #8 NCOA1 (ENSBBBG00000018553) #10 PTRHD1 (ENSBBBG00000004568) #11 CENPO (ENSBBBG00000018527) #12 ADCY3 (ENSBBBG00000018516) #13 DNAJC27 (ENSBBBG00000018479) #14 EFR3B (ENSBBBG00000004527) #15 POMC (ENSBBBG00000006902) #16 ENSBBBG00000018393 DNMT3A (ENSBBBG00000004490) #17 DTNB (ENSBBBG00000018305) ASXL2 (ENSBBBG00000017858) #19 ENSBBBG00000017835 KIF3C (ENSBBBG00000017822) #21 RAB10 (ENSBBBG00000017772) #22 GAREM2 (ENSBBBG00000008382) #23 HADHA (ENSBBBG00000017750) #24 HADHB (ENSBBBG00000017631) #25 ADGRF3 (ENSBBBG00000017500) #26 SELENOI (ENSBBBG00000017484) #27 ENSBBBG00000017459 #28 OTOF (ENSBBBG00000004312) #29 FAM166C (ENSBBBG00000017115) #30 CIB4 (ENSBBBG00000017106) #31 KCNK3 (ENSBBBG00000004224) #32 SLC35F6 (ENSBBBG00000017080) #33 ENSBBBG00000017068 #34 DPYSL5 (ENSBBBG00000017042) #35 MAPRE3 (ENSBBBG00000016965) #36 TMEM214 (ENSBBBG00000016931) #37 Cetacea ANCESTRAL SPECIES 16 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959.d #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b.m #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Blue whale MODERN SPECIES 4 PFN4 (ENSBMSG00010012996) FAM228B (ENSBMSG00010012972) #7 ITSN2 (ENSBMSG00010012828) #8 NCOA1 (ENSBMSG00010012629) #10 PTRHD1 (ENSBMSG00010012561) #11 CENPO (ENSBMSG00010012541) #12 ADCY3 (ENSBMSG00010012510) #13 DNAJC27 (ENSBMSG00010012472) #14 EFR3B (ENSBMSG00010012424) #15 POMC (ENSBMSG00010012400) #16 DNMT3A (ENSBMSG00010012344) #17 ENSBMSG00010012314 DTNB (ENSBMSG00010012231) ASXL2 (ENSBMSG00010012153) #19 KIF3C (ENSBMSG00010012120) #21 RAB10 (ENSBMSG00010012106) #22 HADHA (ENSBMSG00010011954) #24 HADHB (ENSBMSG00010011872) #25 ADGRF3 (ENSBMSG00010011811) #26 SELENOI (ENSBMSG00010011740) #27 DRC1 (ENSBMSG00010011621) #28 OTOF (ENSBMSG00010011447) #29 FAM166C (ENSBMSG00010011346) #30 CIB4 (ENSBMSG00010011318) #31 KCNK3 (ENSBMSG00010011291) #32 SLC35F6 (ENSBMSG00010011273) #33 CENPA (ENSBMSG00010011244) #34 DPYSL5 (ENSBMSG00010011203) #35 MAPRE3 (ENSBMSG00010011178) #36 TMEM214 (ENSBMSG00010011131) #37 AGBL5 (ENSBMSG00010011101) Odontoceti ANCESTRAL SPECIES 15 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959.d #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b.m #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 ENSGT00940000158032 ENSGT00390000016516 Sperm whale MODERN SPECIES 3 SF3B6 (ENSPCTG00005018047) FAM228B (ENSPCTG00005018071) #7 PFN4 (ENSPCTG00005018269) ITSN2 (ENSPCTG00005018639) #8 NCOA1 (ENSPCTG00005020989) #10 ENSPCTG00005021078 PTRHD1 (ENSPCTG00005021089) #11 CENPO (ENSPCTG00005021111) #12 ADCY3 (ENSPCTG00005021158) #13 DNAJC27 (ENSPCTG00005021182) #14 EFR3B (ENSPCTG00005021246) #15 POMC (ENSPCTG00005021388) #16 DNMT3A (ENSPCTG00005021441) #17 DTNB (ENSPCTG00005021592) ASXL2 (ENSPCTG00005021682) #19 RAB10 (ENSPCTG00005021719) #22 GAREM2 (ENSPCTG00005021751) #23 HADHA (ENSPCTG00005021814) #24 HADHB (ENSPCTG00005004125) #25 ENSPCTG00005004220 SELENOI (ENSPCTG00005004235) #27 DRC1 (ENSPCTG00005004253) #28 ENSPCTG00005004272 OTOF (ENSPCTG00005004362) #29 ENSPCTG00005004838 #31 ENSPCTG00005004849 #35 CENPA (ENSPCTG00005004881) #34 MAPRE3 (ENSPCTG00005004904) #36 TMEM214 (ENSPCTG00005004939) #37 AGBL5 (ENSPCTG00005005070) KHK (ENSPCTG00005005126) Odontoceti_a ANCESTRAL SPECIES 12 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959.d #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b.m #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B.k #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 ENSGT00940000158032 ENSGT00390000016516 Dolphin MODERN SPECIES 2959 RAB10 (ENSTTRG00000010192) #22 GAREM2 (ENSTTRG00000010196) #23 HADHA (ENSTTRG00000010204) #24 HADHB (ENSTTRG00000010217) #25 SELENOI (ENSTTRG00000010232) #27 DRC1 (ENSTTRG00000010239) #28 OTOF (ENSTTRG00000010249) #29 CIB4 (ENSTTRG00000010269) #31 KCNK3 (ENSTTRG00000010273) #32 SLC35F6 (ENSTTRG00000010274) #33 CENPA (ENSTTRG00000010278) #34 DPYSL5 (ENSTTRG00000010281) #35 Odontoceti_b ANCESTRAL SPECIES 15 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959.d #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b.m #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B.k #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 ENSGT00940000158032 ENSGT00390000016516 Vaquita MODERN SPECIES 4 PFN4 (ENSPSNG00000006828) ENSPSNG00000006856 ##7 ITSN2 (ENSPSNG00000007059) #8 NCOA1 (ENSPSNG00000007384) #10 ENSPSNG00000007435 ADCY3 (ENSPSNG00000007484) #13 CENPO (ENSPSNG00000007599) #12 DNAJC27 (ENSPSNG00000007648) #14 EFR3B (ENSPSNG00000007711) #15 POMC (ENSPSNG00000008036) #16 DNMT3A (ENSPSNG00000008093) #17 ENSPSNG00000008291 #18 ENSPSNG00000008385 ENSPSNG00000008422 #19 KIF3C (ENSPSNG00000008462) #21 RAB10 (ENSPSNG00000008511) #22 GAREM2 (ENSPSNG00000008565) #23 HADHA (ENSPSNG00000008638) #24 HADHB (ENSPSNG00000008833) #25 SELENOI (ENSPSNG00000009045) #27 DRC1 (ENSPSNG00000009090) #28 OTOF (ENSPSNG00000009430) #29 CIB4 (ENSPSNG00000010868) #31 KCNK3 (ENSPSNG00000010967) #32 SLC35F6 (ENSPSNG00000011008) #33 CENPA (ENSPSNG00000011049) #34 DPYSL5 (ENSPSNG00000011087) #35 MAPRE3 (ENSPSNG00000011141) #36 TMEM214 (ENSPSNG00000011216) #37 AGBL5 (ENSPSNG00000011301) EMILIN1 (ENSPSNG00000004344) Monodontidae ANCESTRAL SPECIES 13 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00940000154259.l.q.a.b ENSGT00950000183021.b #10 ENSGT00500000044959.d #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b.m #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B.k.a #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 ENSGT00940000158032 ENSGT00390000016516 Narwhal MODERN SPECIES 305 FAM228B (ENSMMNG00015008593) #7 ENSMMNG00015008570 ##7 ITSN2 (ENSMMNG00015008479) #8 ENSMMNG00015008406 NCOA1 (ENSMMNG00015008366) #10 PTRHD1 (ENSMMNG00015008347) #11 CENPO (ENSMMNG00015008336) #12 ADCY3 (ENSMMNG00015008323) #13 DNAJC27 (ENSMMNG00015008298) #14 EFR3B (ENSMMNG00015008257) #15 POMC (ENSMMNG00015008233) #16 DNMT3A (ENSMMNG00015008178) #17 ENSMMNG00015008102 #18 ASXL2 (ENSMMNG00015008012) #19 KIF3C (ENSMMNG00015007955) #21 RAB10 (ENSMMNG00015007937) #22 GAREM2 (ENSMMNG00015007895) #23 HADHA (ENSMMNG00015007825) #24 HADHB (ENSMMNG00015007735) #25 SELENOI (ENSMMNG00015007642) #27 ENSMMNG00015007617 #28 OTOF (ENSMMNG00015007376) #29 CIB4 (ENSMMNG00015007284) #31 KCNK3 (ENSMMNG00015007259) #32 SLC35F6 (ENSMMNG00015007235) #33 ENSMMNG00015007210 #34 DPYSL5 (ENSMMNG00015007179) #35 MAPRE3 (ENSMMNG00015007148) #36 TMEM214 (ENSMMNG00015007098) #37 AGBL5 (ENSMMNG00015007054) OST4 (ENSMMNG00015007039) Beluga whale MODERN SPECIES 37 TP53I3 (ENSDLEG00000003236) PFN4 (ENSDLEG00000003231) FAM228B (ENSDLEG00000003177) #7 ITSN2 (ENSDLEG00000001766) #8 ENSDLEG00000001459 NCOA1 (ENSDLEG00000001416) #10 CENPO (ENSDLEG00000001398) #12 ADCY3 (ENSDLEG00000001361) #13 DNAJC27 (ENSDLEG00000001321) #14 EFR3B (ENSDLEG00000001247) #15 POMC (ENSDLEG00000001217) #16 DNMT3A (ENSDLEG00000001166) #17 DTNB (ENSDLEG00000001035) ASXL2 (ENSDLEG00000000951) #19 KIF3C (ENSDLEG00000000897) #21 RAB10 (ENSDLEG00000000876) #22 GAREM2 (ENSDLEG00000000854) #23 ENSDLEG00000000841 HADHA (ENSDLEG00000000819) #24 HADHB (ENSDLEG00000000782) #25 SELENOI (ENSDLEG00000000757) #27 DRC1 (ENSDLEG00000000706) #28 OTOF (ENSDLEG00000000377) #29 ENSDLEG00000000258 #31 KCNK3 (ENSDLEG00000000236) #32 SLC35F6 (ENSDLEG00000000163) #33 ENSDLEG00000000124 #34 DPYSL5 (ENSDLEG00000021816) #35 MAPRE3 (ENSDLEG00000021812) #36 TMEM214 (ENSDLEG00000021807) #37 AGBL5 (ENSDLEG00000021803) Laurasiatheria_b ANCESTRAL SPECIES 17 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00960000189637 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Carnivora ANCESTRAL SPECIES 19 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Caniformia ANCESTRAL SPECIES 18 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Canidae ANCESTRAL SPECIES 46 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00990000213351 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b.cb #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Red fox MODERN SPECIES 189 PFN4 (ENSVVUG00000010887) FAM228B (ENSVVUG00000010899) #7 ITSN2 (ENSVVUG00000011007) #8 NCOA1 (ENSVVUG00000013134) #10 ADCY3 (ENSVVUG00000014909) #13 CENPO (ENSVVUG00000015237) #12 DNAJC27 (ENSVVUG00000015241) #14 EFR3B (ENSVVUG00000015262) #15 POMC (ENSVVUG00000015392) #16 DNMT3A (ENSVVUG00000015409) #17 DTNB (ENSVVUG00000015770) #18 ASXL2 (ENSVVUG00000015856) #19 ENSVVUG00000015876 KIF3C (ENSVVUG00000015885) #21 ENSVVUG00000015893 RAB10 (ENSVVUG00000015895) #22 GAREM2 (ENSVVUG00000015897) #23 HADHA (ENSVVUG00000015907) #24 HADHB (ENSVVUG00000015924) #25 ADGRF3 (ENSVVUG00000015946) #26 SELENOI (ENSVVUG00000015951) #27 DRC1 (ENSVVUG00000015954) #28 CIB4 (ENSVVUG00000016001) #31 ENSVVUG00000016007 #30 KCNK3 (ENSVVUG00000016010) #32 SLC35F6 (ENSVVUG00000016012) #33 CENPA (ENSVVUG00000016014) #34 DPYSL5 (ENSVVUG00000016028) #35 ENSVVUG00000016046 MAPRE3 (ENSVVUG00000016049) #36 TMEM214 (ENSVVUG00000016053) #37 Canis_lupus ANCESTRAL SPECIES 10 ENSGT00530000064185.a #7 ENSGT00940000164632.b ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00990000213351 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b.cb #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Dog MODERN SPECIES 8 ENSCAFG00845023204 ENSCAFG00845023435 ENSCAFG00845023479 ITSN2 (ENSCAFG00845023729) #8 NCOA1 (ENSCAFG00845024663) #10 PTRHD1 (ENSCAFG00845024920) #11 CENPO (ENSCAFG00845024979) #12 ADCY3 (ENSCAFG00845025117) #13 DNAJC27 (ENSCAFG00845025362) #14 EFR3B (ENSCAFG00845025549) #15 POMC (ENSCAFG00845026092) #16 DNMT3A (ENSCAFG00845026173) #17 DTNB (ENSCAFG00845026621) #18 ASXL2 (ENSCAFG00845027213) #19 KIF3C (ENSCAFG00845027365) #21 RAB10 (ENSCAFG00845027419) #22 GAREM2 (ENSCAFG00845027452) #23 HADHA (ENSCAFG00845027504) #24 ENSCAFG00845027719 #25 ADGRF3 (ENSCAFG00845027979) #26 SELENOI (ENSCAFG00845028041) #27 DRC1 (ENSCAFG00845028116) #28 OTOF (ENSCAFG00845028326) #29 FAM166C (ENSCAFG00845028780) #30 OTOF (ENSCAFG00845028822) #31 KCNK3 (ENSCAFG00845028885) #32 SLC35F6 (ENSCAFG00845028914) #33 CENPA (ENSCAFG00845028982) #34 DPYSL5 (ENSCAFG00845029023) #35 MAPRE3 (ENSCAFG00845005806) #36 SLC5A6 (ENSCAFG00845005860) Dingo MODERN SPECIES 223 PFN4 (ENSCAFG00020025574) FAM228B (ENSCAFG00020025572) #7 ENSCAFG00020025533 ITSN2 (ENSCAFG00020025489) #8 NCOA1 (ENSCAFG00020025385) #10 CENPO (ENSCAFG00020025375) #12 ADCY3 (ENSCAFG00020025293) #13 DNAJC27 (ENSCAFG00020025277) #14 EFR3B (ENSCAFG00020025238) #15 POMC (ENSCAFG00020025221) #16 DNMT3A (ENSCAFG00020025176) #17 ENSCAFG00020025160 #18 ASXL2 (ENSCAFG00020025120) #19 KIF3C (ENSCAFG00020025103) #21 ENSCAFG00020025102 RAB10 (ENSCAFG00020025098) #22 GAREM2 (ENSCAFG00020025095) #23 HADHA (ENSCAFG00020024925) #24 ENSCAFG00020024883 #25 ADGRF3 (ENSCAFG00020024878) #26 SELENOI (ENSCAFG00020024863) #27 DRC1 (ENSCAFG00020024833) #28 OTOF (ENSCAFG00020024797) #29 FAM166C (ENSCAFG00020024794) #30 CIB4 (ENSCAFG00020024789) #31 KCNK3 (ENSCAFG00020024787) #32 SLC35F6 (ENSCAFG00020024784) #33 CENPA (ENSCAFG00020024783) #34 DPYSL5 (ENSCAFG00020024773) #35 MAPRE3 (ENSCAFG00020024770) #36 TMEM214 (ENSCAFG00020024765) #37 Caniformia_b ANCESTRAL SPECIES 11 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Mustelinae ANCESTRAL SPECIES 55 ENSGT00940000161217 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 American mink MODERN SPECIES 7 ITSN2 (ENSNVIG00000012550) #8 NCOA1 (ENSNVIG00000012372) #10 ENSNVIG00000012352 #11 CENPO (ENSNVIG00000012341) #12 ADCY3 (ENSNVIG00000012293) #13 DNAJC27 (ENSNVIG00000012276) #14 EFR3B (ENSNVIG00000012176) #15 DNMT3A (ENSNVIG00000012095) #17 ENSNVIG00000012087 ENSNVIG00000011719 ENSNVIG00000011667 ENSNVIG00000011664 ASXL2 (ENSNVIG00000011638) #19 KIF3C (ENSNVIG00000011611) #21 ENSNVIG00000011606 RAB10 (ENSNVIG00000011586) #22 GAREM2 (ENSNVIG00000011575) #23 HADHA (ENSNVIG00000011530) #24 HADHB (ENSNVIG00000011410) #25 ADGRF3 (ENSNVIG00000011368) #26 SELENOI (ENSNVIG00000011344) #27 CC164 (ENSNVIG00000011276) #28 OTOF (ENSNVIG00000011081) #29 FAM166C (ENSNVIG00000011066) #30 CIB4 (ENSNVIG00000011050) #31 KCNK3 (ENSNVIG00000011039) #32 RIMS4 (ENSNVIG00000011024) YWHAB (ENSNVIG00000011016) PABPC1L (ENSNVIG00000010962) TOMM34 (ENSNVIG00000010955) STK4 (ENSNVIG00000010914) Ursidae ANCESTRAL SPECIES 9 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Giant Panda MODERN SPECIES 14 ENSAMEG00000025446 #7 ENSAMEG00000002768 ##7 ITSN2 (ENSAMEG00000002721) #8 NCOA1 (ENSAMEG00000002653) #10 PTRHD1 (ENSAMEG00000026884) #11 CENPO (ENSAMEG00000002642) #12 ADCY3 (ENSAMEG00000002572) #13 DNAJC27 (ENSAMEG00000002554) #14 EFR3B (ENSAMEG00000002518) #15 POMC (ENSAMEG00000002511) #16 DNMT3A (ENSAMEG00000002443) #17 ENSAMEG00000002424 #18 ENSAMEG00000028157 ASXL2 (ENSAMEG00000002397) #19 KIF3C (ENSAMEG00000002379) #21 ENSAMEG00000002360 #22 GAREM2 (ENSAMEG00000026829) #23 HADHA (ENSAMEG00000002313) #24 HADHB (ENSAMEG00000002288) #25 ADGRF3 (ENSAMEG00000002279) #26 SELENOI (ENSAMEG00000002275) #27 DRC1 (ENSAMEG00000002238) #28 OTOF (ENSAMEG00000002163) #29 FAM166C (ENSAMEG00000002155) #30 CIB4 (ENSAMEG00000002150) #31 KCNK3 (ENSAMEG00000002147) #32 SLC35F6 (ENSAMEG00000002126) #33 CENPA (ENSAMEG00000002112) #34 DPYSL5 (ENSAMEG00000002012) #35 MAPRE3 (ENSAMEG00000001977) #36 TMEM214 (ENSAMEG00000001938) #37 Ursus ANCESTRAL SPECIES 27 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00390000007479.z ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00910000147123 ENSGT00490000043329.a.b #36 Polar bear MODERN SPECIES 223 TP53I3 (ENSUMAG00000022832) PFN4 (ENSUMAG00000022828) FAM228B (ENSUMAG00000022825) #7 ENSUMAG00000022822 ##7 ITSN2 (ENSUMAG00000022686) #8 NCOA1 (ENSUMAG00000022630) #10 CENPO (ENSUMAG00000022621) #12 ADCY3 (ENSUMAG00000022574) #13 DNAJC27 (ENSUMAG00000022558) #14 EFR3B (ENSUMAG00000022545) #15 DNMT3A (ENSUMAG00000022397) #17 ENSUMAG00000022354 #18 ASXL2 (ENSUMAG00000022345) #19 ENSUMAG00000022340 KIF3C (ENSUMAG00000022313) #21 RAB10 (ENSUMAG00000022303) #22 HADHA (ENSUMAG00000022289) #24 HADHB (ENSUMAG00000022281) #25 ENSUMAG00000022277 #26 SELENOI (ENSUMAG00000022269) #27 DRC1 (ENSUMAG00000022194) #28 OTOF (ENSUMAG00000022140) #29 FAM166C (ENSUMAG00000022134) #30 ENSUMAG00000022131 #31 SLC35F6 (ENSUMAG00000022128) #33 CENPA (ENSUMAG00000022125) #34 DPYSL5 (ENSUMAG00000022079) #35 ENSUMAG00000022073 MAPRE3 (ENSUMAG00000022068) #36 TMEM214 (ENSUMAG00000021997) #37 AGBL5 (ENSUMAG00000021982) American black bear MODERN SPECIES 1610 RAB10 (ENSUAMG00000008895) #22 GAREM2 (ENSUAMG00000008890) #23 HADHA (ENSUAMG00000008883) #24 HADHB (ENSUAMG00000008876) #25 ENSUAMG00000008871 ENSUAMG00000008867 #26 Felidae ANCESTRAL SPECIES 3 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Panthera ANCESTRAL SPECIES 2 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Tiger MODERN SPECIES 287 DNAJC27 (ENSPTIG00000013443) #14 EFR3B (ENSPTIG00000007845) #15 ENSPTIG00000006949 #16 DNMT3A (ENSPTIG00000017909) #17 DTNB (ENSPTIG00000019750) KIF3C (ENSPTIG00000015228) #21 RAB10 (ENSPTIG00000014861) #22 HADHA (ENSPTIG00000014280) #24 HADHB (ENSPTIG00000009770) #25 ADGRF3 (ENSPTIG00000002861) #26 SELENOI (ENSPTIG00000021799) #27 DRC1 (ENSPTIG00000020695) #28 OTOF (ENSPTIG00000021218) #29 FAM166C (ENSPTIG00000019670) #30 CIB4 (ENSPTIG00000018756) #31 ENSPTIG00000018187 #32 SLC35F6 (ENSPTIG00000017375) #33 CENPA (ENSPTIG00000017121) #34 DPYSL5 (ENSPTIG00000016404) #35 ENSPTIG00000016113 ##36 TMEM214 (ENSPTIG00000012413) #37 AGBL5 (ENSPTIG00000011353) Panthera_a ANCESTRAL SPECIES 1 ENSGT00940000161217 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 leopard MODERN SPECIES TP53I3 (ENSPPRG00000023247) PFN4 (ENSPPRG00000023234) FAM228B (ENSPPRG00000023222) #7 ITSN2 (ENSPPRG00000023119) #8 NCOA1 (ENSPPRG00000022996) #10 PTRHD1 (ENSPPRG00000022961) #11 CENPO (ENSPPRG00000022951) #12 ADCY3 (ENSPPRG00000022933) #13 DNAJC27 (ENSPPRG00000022920) #14 EFR3B (ENSPPRG00000022872) #15 POMC (ENSPPRG00000022853) #16 DNMT3A (ENSPPRG00000022803) #17 DTNB (ENSPPRG00000000149) ASXL2 (ENSPPRG00000000239) #19 KIF3C (ENSPPRG00000000256) #21 RAB10 (ENSPPRG00000000261) #22 GAREM2 (ENSPPRG00000000295) #23 HADHA (ENSPPRG00000000312) #24 HADHB (ENSPPRG00000000393) #25 ADGRF3 (ENSPPRG00000000445) #26 SELENOI (ENSPPRG00000000475) #27 DRC1 (ENSPPRG00000000495) #28 OTOF (ENSPPRG00000000530) #29 FAM166C (ENSPPRG00000000546) #30 CIB4 (ENSPPRG00000000556) #31 KCNK3 (ENSPPRG00000000563) #32 SLC35F6 (ENSPPRG00000000570) #33 CENPA (ENSPPRG00000000575) #34 DPYSL5 (ENSPPRG00000000590) #35 MAPRE3 (ENSPPRG00000000603) #36 TMEM214 (ENSPPRG00000000634) #37 lion MODERN SPECIES 3 PFN4 (ENSPLOG00000000771) FAM228B (ENSPLOG00000000790) #7 ITSN2 (ENSPLOG00000000988) #8 NCOA1 (ENSPLOG00000001183) #10 PTRHD1 (ENSPLOG00000001311) #11 CENPO (ENSPLOG00000001323) #12 ADCY3 (ENSPLOG00000001367) #13 DNAJC27 (ENSPLOG00000001417) #14 EFR3B (ENSPLOG00000001467) #15 POMC (ENSPLOG00000001533) #16 DNMT3A (ENSPLOG00000001561) #17 ENSPLOG00000001685 #18 ASXL2 (ENSPLOG00000001803) #19 ENSPLOG00000001827 KIF3C (ENSPLOG00000001843) #21 RAB10 (ENSPLOG00000001873) #22 GAREM2 (ENSPLOG00000001895) #23 HADHA (ENSPLOG00000001953) #24 ENSPLOG00000002151 #25 ENSPLOG00000002330 ENSPLOG00000002341 ADGRF3 (ENSPLOG00000002389) #26 SELENOI (ENSPLOG00000002450) #27 DRC1 (ENSPLOG00000002473) #28 OTOF (ENSPLOG00000002573) #29 FAM166C (ENSPLOG00000002878) #30 CIB4 (ENSPLOG00000002901) #31 KCNK3 (ENSPLOG00000002929) #32 SLC35F6 (ENSPLOG00000002941) #33 CENPA (ENSPLOG00000002966) #34 DPYSL5 (ENSPLOG00000003005) #35 Cat MODERN SPECIES 2 FAM228B (ENSFCAG00000028526) #7 ENSFCAG00000037101 ##7 ITSN2 (ENSFCAG00000004308) #8 NCOA1 (ENSFCAG00000025791) #10 PTRHD1 (ENSFCAG00000003648) #11 CENPO (ENSFCAG00000028869) #12 ADCY3 (ENSFCAG00000003651) #13 DNAJC27 (ENSFCAG00000038919) #14 EFR3B (ENSFCAG00000024517) #15 POMC (ENSFCAG00000003658) #16 DNMT3A (ENSFCAG00000003659) #17 DTNB (ENSFCAG00000000232) #18 ENSFCAG00000037234 ASXL2 (ENSFCAG00000003836) #19 KIF3C (ENSFCAG00000015635) #21 RAB10 (ENSFCAG00000024401) #22 GAREM2 (ENSFCAG00000023983) #23 HADHA (ENSFCAG00000014933) #24 HADHB (ENSFCAG00000014934) #25 ENSFCAG00000050388 ENSFCAG00000047852 ADGRF3 (ENSFCAG00000009009) #26 SELENOI (ENSFCAG00000032898) #27 DRC1 (ENSFCAG00000000034) #28 OTOF (ENSFCAG00000000035) #29 CA3H2orf70 (ENSFCAG00000000036) #30 CIB4 (ENSFCAG00000000368) #31 KCNK3 (ENSFCAG00000040829) #32 SLC35F6 (ENSFCAG00000026864) #33 CENPA (ENSFCAG00000019293) #34 DPYSL5 (ENSFCAG00000001652) #35 Laurasiatheria_c ANCESTRAL SPECIES 14 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00960000189637 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Chiroptera ANCESTRAL SPECIES 10 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00960000189637 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Microchiroptera ANCESTRAL SPECIES 14 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00960000189637 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Greater horseshoe bat MODERN SPECIES 4 FAM228A (ENSRFEG00010017718) ##7 ITSN2 (ENSRFEG00010017613) #8 ENSRFEG00010017543 NCOA1 (ENSRFEG00010017430) #10 PTRHD1 (ENSRFEG00010017391) #11 CENPO (ENSRFEG00010017262) #12 ADCY3 (ENSRFEG00010017185) #13 DNAJC27 (ENSRFEG00010017106) #14 EFR3B (ENSRFEG00010016983) #15 POMC (ENSRFEG00010016944) #16 DNMT3A (ENSRFEG00010016679) #17 ENSRFEG00010016372 #18 ENSRFEG00010016277 ASXL2 (ENSRFEG00010016207) #19 KIF3C (ENSRFEG00010016154) #21 RAB10 (ENSRFEG00010016112) #22 GAREM2 (ENSRFEG00010016065) #23 HADHA (ENSRFEG00010015960) #24 HADHB (ENSRFEG00010015789) #25 ADGRF3 (ENSRFEG00010015582) #26 SELENOI (ENSRFEG00010015540) #27 DRC1 (ENSRFEG00010015514) #28 OTOF (ENSRFEG00010015369) #29 FAM166C (ENSRFEG00010015294) #30 CIB4 (ENSRFEG00010015172) #31 KCNK3 (ENSRFEG00010015096) #32 SLC35F6 (ENSRFEG00010015042) #33 CENPA (ENSRFEG00010014848) #34 DPYSL5 (ENSRFEG00010014789) #35 MAPRE3 (ENSRFEG00010014677) #36 TMEM214 (ENSRFEG00010014138) #37 Microbat MODERN SPECIES 1515 ENSMLUG00000014167 #18 ASXL2 (ENSMLUG00000014831) #19 KIF3C (ENSMLUG00000014837) #21 RAB10 (ENSMLUG00000009937) #22 ENSMLUG00000009953 #23 ENSMLUG00000023835 #24 Megabat MODERN SPECIES 3498 KIF3C (ENSPVAG00000001072) #21 RAB10 (ENSPVAG00000001074) #22 GAREM2 (ENSPVAG00000001075) #23 HADHA (ENSPVAG00000001076) #24 Equus ANCESTRAL SPECIES 7 ENSGT00390000017067 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Donkey MODERN SPECIES 26 ENSEASG00005027350 FAM228B (ENSEASG00005029839) #7 ENSEASG00005009998 ##7 ITSN2 (ENSEASG00005010089) #8 NCOA1 (ENSEASG00005010550) #10 ENSEASG00005034326 #11 CENPO (ENSEASG00005010597) #12 ADCY3 (ENSEASG00005010572) #13 DNAJC27 (ENSEASG00005010598) #14 EFR3B (ENSEASG00005010599) #15 POMC (ENSEASG00005010600) #16 DNMT3A (ENSEASG00005010712) #17 DTNB (ENSEASG00005011562) ASXL2 (ENSEASG00005011580) #19 KIF3C (ENSEASG00005011585) #21 RAB10 (ENSEASG00005011588) #22 GAREM2 (ENSEASG00005011592) #23 HADHA (ENSEASG00005011596) #24 ENSEASG00005022116 #25 ADGRF3 (ENSEASG00005022225) #26 SELENOI (ENSEASG00005012697) #27 DRC1 (ENSEASG00005012692) #28 OTOF (ENSEASG00005012660) #29 FAM166C (ENSEASG00005012638) #30 CIB4 (ENSEASG00005012635) #31 KCNK3 (ENSEASG00005028893) #32 SLC35F6 (ENSEASG00005012632) #33 CENPA (ENSEASG00005012631) #34 DPYSL5 (ENSEASG00005012628) #35 MAPRE3 (ENSEASG00005012624) #36 TMEM214 (ENSEASG00005012620) #37 Horse MODERN SPECIES 6 ENSECAG00000014593 ##7 ITSN2 (ENSECAG00000020425) #8 ENSECAG00000028792 NCOA1 (ENSECAG00000017819) #10 PTRHD1 (ENSECAG00000017730) #11 CENPO (ENSECAG00000017127) #12 ADCY3 (ENSECAG00000008344) #13 DNAJC27 (ENSECAG00000024595) #14 EFR3B (ENSECAG00000016528) #15 POMC (ENSECAG00000016388) #16 DNMT3A (ENSECAG00000025086) #17 DTNB (ENSECAG00000014987) ENSECAG00000054333 ASXL2 (ENSECAG00000010885) #19 KIF3C (ENSECAG00000000746) #21 RAB10 (ENSECAG00000032798) #22 GAREM2 (ENSECAG00000023175) #23 HADHA (ENSECAG00000015725) #24 HADHB (ENSECAG00000054935) #25 ADGRF3 (ENSECAG00000007460) #26 SELENOI (ENSECAG00000046166) #27 DRC1 (ENSECAG00000020710) #28 OTOF (ENSECAG00000002692) #29 CIB4 (ENSECAG00000020061) #31 KCNK3 (ENSECAG00000038775) #32 SLC35F6 (ENSECAG00000017703) #33 CENPA (ENSECAG00000016271) #34 DPYSL5 (ENSECAG00000024403) #35 ENSECAG00000016515 #36 TMEM214 (ENSECAG00000010689) #37 AGBL5 (ENSECAG00000007490) Atlantogenata ANCESTRAL SPECIES 14 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000164632.b ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Xenarthra ANCESTRAL SPECIES 648 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 Sloth MODERN SPECIES 4407 RAB10 (ENSCHOG00000004748) #22 Armadillo MODERN SPECIES 392 NPVF (ENSDNOG00000018761) C7orf31 (ENSDNOG00000048979) ENSDNOG00000047486 OSBPL3 (ENSDNOG00000008460) GSDME (ENSDNOG00000007884) PALS2 (ENSDNOG00000007871) ENSDNOG00000038117 ENSDNOG00000048956 NPY (ENSDNOG00000002909) ENSDNOG00000035629 RAB10 (ENSDNOG00000045834) #22 GAREM2 (ENSDNOG00000033219) #23 HADHA (ENSDNOG00000006972) #24 HADHB (ENSDNOG00000006999) #25 ADGRF3 (ENSDNOG00000007015) #26 SELENOI (ENSDNOG00000007037) #27 DRC1 (ENSDNOG00000038749) #28 OTOF (ENSDNOG00000037747) #29 Afrotheria ANCESTRAL SPECIES 26 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000164632.b ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Tenrec MODERN SPECIES 9108 RAB10 (ENSETEG00000010795) #22 Afrotheria_a ANCESTRAL SPECIES 26 ENSGT00530000064185.a #7 ENSGT00530000064185.b ##7 ENSGT00940000164632.b ENSGT00940000155936.b #8 ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Elephant MODERN SPECIES 197 ENSLAFG00000000618 ##7 ENSLAFG00000032314 ITSN2 (ENSLAFG00000000620) #8 NCOA1 (ENSLAFG00000014442) #10 PTRHD1 (ENSLAFG00000014453) #11 CENPO (ENSLAFG00000014455) #12 ADCY3 (ENSLAFG00000014458) #13 DNAJC27 (ENSLAFG00000002742) #14 EFR3B (ENSLAFG00000013258) #15 POMC (ENSLAFG00000031034) #16 DNMT3A (ENSLAFG00000013263) #17 ENSLAFG00000013179 #18 ASXL2 (ENSLAFG00000002035) #19 KIF3C (ENSLAFG00000004381) #21 ENSLAFG00000030378 RAB10 (ENSLAFG00000027391) #22 GAREM2 (ENSLAFG00000002730) #23 HADHA (ENSLAFG00000002731) #24 HADHB (ENSLAFG00000008375) #25 ADGRF3 (ENSLAFG00000005262) #26 ENSLAFG00000020893 #27 DRC1 (ENSLAFG00000001893) #28 OTOF (ENSLAFG00000012736) #29 FAM166C (ENSLAFG00000016384) #30 CIB4 (ENSLAFG00000016389) #31 KCNK3 (ENSLAFG00000012031) #32 SLC35F6 (ENSLAFG00000006862) #33 CENPA (ENSLAFG00000020873) #34 DPYSL5 (ENSLAFG00000013765) #35 MAPRE3 (ENSLAFG00000014552) #36 TMEM214 (ENSLAFG00000014558) #37 Hyrax MODERN SPECIES 7607 RAB10 (ENSPCAG00000013441) #22 Marsupialia ANCESTRAL SPECIES 15 ENSGT00940000158299 ENSGT00940000157269.a.a ENSGT00940000160868 ENSGT01030000234597.a.b.a ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Marsupialia_b ANCESTRAL SPECIES 9 ENSGT00940000158299 ENSGT00940000157269.a.a ENSGT00940000160868 ENSGT01030000234597.a.b.a ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Diprotodontia ANCESTRAL SPECIES 2 ENSGT00940000158299 ENSGT00940000157269.a.a ENSGT00940000160868 ENSGT01030000234597.a.b.a ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Diprotodontia_a ANCESTRAL SPECIES 2 ENSGT00940000158299 ENSGT00940000157269.a.a ENSGT00940000160868 ENSGT01030000234597.a.b.a ENSGT00950000183021.b #10 ENSGT00500000044959 #11 ENSGT00390000016702 #12 ENSGT00940000156549.a.a #13 ENSGT00940000157133 #14 ENSGT00390000002143.b #15 ENSGT00390000016811 #16 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT01100000263514.B #34 ENSGT01030000234527.A.a.a.b #35 ENSGT00490000043329.a.b #36 ENSGT00390000002693 #37 Common wonbat MODERN SPECIES 574 STMN4 (ENSVURG00010001184) NCOA1 (ENSVURG00010001108) #10 PTRHD1 (ENSVURG00010001076) #11 CENPO (ENSVURG00010001066) #12 ADCY3 (ENSVURG00010000999) #13 DNAJC27 (ENSVURG00010000971) #14 EFR3B (ENSVURG00010000919) #15 ENSVURG00010000874 #16 ENSVURG00010000869 DNMT3A (ENSVURG00010000794) #17 ENSVURG00010000721 #18 ENSVURG00010000697 ASXL2 (ENSVURG00010000667) #19 ENSVURG00010000654 KIF3C (ENSVURG00010000616) #21 RAB10 (ENSVURG00010000601) #22 GAREM2 (ENSVURG00010000581) #23 HADHA (ENSVURG00010000555) #24 HADHB (ENSVURG00010000535) #25 ENSVURG00010000497 #26 SELENOI (ENSVURG00010000464) #27 DRC1 (ENSVURG00010000415) #28 OTOF (ENSVURG00010000174) #29 FAM166C (ENSVURG00010000107) #30 ENSVURG00010000101 #31 KCNK3 (ENSVURG00010020970) #32 ENSVURG00010020969 SLC35F6 (ENSVURG00010020968) #33 ENSVURG00010020964 CENPA (ENSVURG00010020960) #34 DPYSL5 (ENSVURG00010020951) #35 koala MODERN SPECIES 15 TRIM35 (ENSPCIG00000027513) STMN4 (ENSPCIG00000025244) NCOA1 (ENSPCIG00000025243) #10 PTRHD1 (ENSPCIG00000025242) #11 CENPO (ENSPCIG00000025241) #12 ADCY3 (ENSPCIG00000025240) #13 DNAJC27 (ENSPCIG00000025239) #14 EFR3B (ENSPCIG00000025238) #15 ENSPCIG00000025237 #16 DNMT3A (ENSPCIG00000025236) #17 ENSPCIG00000025235 ENSPCIG00000025234 #18 ENSPCIG00000025231 ASXL2 (ENSPCIG00000025232) #19 KIF3C (ENSPCIG00000025229) #21 RAB10 (ENSPCIG00000024427) #22 GAREM2 (ENSPCIG00000024425) #23 HADHA (ENSPCIG00000024420) #24 HADHB (ENSPCIG00000024419) #25 ADGRF3 (ENSPCIG00000024418) #26 SELENOI (ENSPCIG00000024416) #27 DRC1 (ENSPCIG00000024414) #28 OTOF (ENSPCIG00000024403) #29 FAM166C (ENSPCIG00000024393) #30 CIB4 (ENSPCIG00000024392) #31 KCNK3 (ENSPCIG00000024391) #32 SLC35F6 (ENSPCIG00000012050) #33 CENPA (ENSPCIG00000012054) #34 DPYSL5 (ENSPCIG00000036730) #35 MAPRE3 (ENSPCIG00000012066) #36 TMEM214 (ENSPCIG00000012073) #37 Wallaby MODERN SPECIES 476 ENSMEUG00000011129 #22 Tasmanian devil MODERN SPECIES 1 PTK2B (ENSSHAG00000029715) ENSSHAG00000023575 ENSSHAG00000007155 ENSSHAG00000003234 #10 PTRHD1 (ENSSHAG00000005774) #11 CENPO (ENSSHAG00000005861) #12 ADCY3 (ENSSHAG00000006048) #13 DNAJC27 (ENSSHAG00000024931) #14 EFR3B (ENSSHAG00000002481) #15 ENSSHAG00000024476 #16 DNMT3A (ENSSHAG00000007509) #17 ENSSHAG00000009563 #18 ASXL2 (ENSSHAG00000012066) #19 KIF3C (ENSSHAG00000020830) #21 ENSSHAG00000030526 RAB10 (ENSSHAG00000032249) #22 GAREM2 (ENSSHAG00000021473) #23 HADHA (ENSSHAG00000014112) #24 HADHB (ENSSHAG00000014373) #25 ADGRF3 (ENSSHAG00000014566) #26 SELENOI (ENSSHAG00000024053) #27 DRC1 (ENSSHAG00000003011) #28 OTOF (ENSSHAG00000004180) #29 ENSSHAG00000026839 CIB4 (ENSSHAG00000021842) #31 KCNK3 (ENSSHAG00000021709) #32 SLC35F6 (ENSSHAG00000026267) #33 CENPA (ENSSHAG00000010305) #34 DPYSL5 (ENSSHAG00000010753) #35 MAPRE3 (ENSSHAG00000011741) #36 TMEM214 (ENSSHAG00000011811) #37 Opossum MODERN SPECIES TRIM35 (ENSMODG00000015914) STMN4 (ENSMODG00000015911) NCOA1 (ENSMODG00000015907) #10 ENSMODG00000023230 PTRHD1 (ENSMODG00000015895) #11 CENPO (ENSMODG00000015893) #12 ADCY3 (ENSMODG00000015887) #13 DNAJC27 (ENSMODG00000015869) #14 ENSMODG00000051458 EFR3B (ENSMODG00000015857) #15 POMC (ENSMODG00000015853) #16 DNMT3A (ENSMODG00000015850) #17 ENSMODG00000015846 #18 ASXL2 (ENSMODG00000015832) #19 KIF3C (ENSMODG00000015824) #21 RAB10 (ENSMODG00000015821) #22 GAREM2 (ENSMODG00000015817) #23 HADHA (ENSMODG00000015815) #24 HADHB (ENSMODG00000015809) #25 ADGRF3 (ENSMODG00000015803) #26 SELENOI (ENSMODG00000015800) #27 DRC1 (ENSMODG00000015797) #28 OTOF (ENSMODG00000015788) #29 FAM166C (ENSMODG00000015776) #30 CIB4 (ENSMODG00000015773) #31 KCNK3 (ENSMODG00000015769) #32 SLC35F6 (ENSMODG00000046989) #33 CENPA (ENSMODG00000049956) #34 DPYSL5 (ENSMODG00000015761) #35 MAPRE3 (ENSMODG00000015753) #36 TMEM214 (ENSMODG00000015750) #37 Platypus MODERN SPECIES 20 KAT14 (ENSOANG00000001251) ENSOANG00000001252 POLR3F (ENSOANG00000001253) ENSOANG00000001254 SCARA3 (ENSOANG00000001256) CCDC25 (ENSOANG00000000791) ENSOANG00000015840 PBK (ENSOANG00000015839) SCARA5 (ENSOANG00000015838) NUGGC (ENSOANG00000015837) ENSOANG00000022083 DNMT3A (ENSOANG00000015836) #17 ENSOANG00000015835 #18 ASXL2 (ENSOANG00000015834) #19 KIF3C (ENSOANG00000015833) #21 RAB10 (ENSOANG00000015832) #22 GAREM2 (ENSOANG00000015831) #23 HADHA (ENSOANG00000015830) #24 HADHB (ENSOANG00000015828) #25 ADGRF3 (ENSOANG00000015827) #26 SELENOI (ENSOANG00000000523) #27 DRC1 (ENSOANG00000000522) #28 OTOF (ENSOANG00000000520) #29 FAM166C (ENSOANG00000000519) #30 ENSOANG00000037767 CIB4 (ENSOANG00000000518) #31 KCNK3 (ENSOANG00000000517) #32 SLC35F6 (ENSOANG00000003585) #33 ENSOANG00000045223 #34 DPYSL5 (ENSOANG00000000514) #35 MAPRE3 (ENSOANG00000040306) #36 Sauria ANCESTRAL SPECIES 1 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.t.b ##22 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00390000008161.b ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT00940000158238 ENSGT00390000004380 ENSGT00950000185082 Lepidosauria ANCESTRAL SPECIES 76 ENSGT00950000182902.a.d ENSGT00940000154141.A ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00390000008161.b tuatara MODERN SPECIES 653 ENSSPUG00000003874 #21 RAB10 (ENSSPUG00000003883) #22 HADHA (ENSSPUG00000003948) #24 HADHB (ENSSPUG00000003973) #25 Episquamata ANCESTRAL SPECIES ENSGT00950000182902.a.d ENSGT00940000154141.A ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00390000008161.b ENSGT00720000108839 ENSGT00940000158598 ENSGT00950000185082 ENSGT00390000004380 ENSGT00940000158238 ENSGT00530000063668.B ENSGT00390000017237 #33 ENSGT00940000158248.b #32 ENSGT00940000161840 #31 ENSGT00390000018634 #30 Laterata ANCESTRAL SPECIES 4 ENSGT00390000018031 ENSGT00950000182902.a.d ENSGT00940000154141.A ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00390000008161.b ENSGT00950000183117.b #27 ENSGT00720000108839 ENSGT00940000158598 ENSGT00990000211035 ENSGT00390000004380 ENSGT00940000158238 ENSGT00530000063668.B ENSGT00390000017237 #33 ENSGT00940000158248.b #32 ENSGT00940000161840 #31 Common wall lizard MODERN SPECIES 11 ENSPMRG00000003259 KHK (ENSPMRG00000003223) ENSPMRG00000003173 EMILIN1 (ENSPMRG00000003143) ENSPMRG00000003123 OST4 (ENSPMRG00000003112) AGBL5 (ENSPMRG00000003053) TMEM214 (ENSPMRG00000002974) #37 MAPRE3 (ENSPMRG00000002953) #36 DPYSL5 (ENSPMRG00000002929) #35 DNMT3A (ENSPMRG00000002898) #17 ENSPMRG00000002837 #18 ENSPMRG00000002820 ENSPMRG00000002794 KIF3C (ENSPMRG00000002785) #21 RAB10 (ENSPMRG00000002770) #22 GAREM2 (ENSPMRG00000002755) #23 HADHA (ENSPMRG00000001286) #24 HADHB (ENSPMRG00000000508) #25 ENSPMRG00000000492 #26 ENSPMRG00000000477 #26 ENSPMRG00000000442 SELENOI (ENSPMRG00000000396) #27 PBK (ENSPMRG00000000363) ESCO2 (ENSPMRG00000000327) ENSPMRG00000000305 CCDC25 (ENSPMRG00000000280) SCARA3 (ENSPMRG00000000237) CLU (ENSPMRG00000003336) SLC35F6 (ENSPMRG00000003328) #33 KCNK3 (ENSPMRG00000003323) #32 Argentine black and white tegu MODERN SPECIES 68 PREB (ENSSMRG00000013040) ABHD1 (ENSSMRG00000013041) CGREF1 (ENSSMRG00000013042) KHK (ENSSMRG00000013043) ENSSMRG00000013044 ENSSMRG00000013045 EMILIN1 (ENSSMRG00000013046) AGBL5 (ENSSMRG00000013047) TMEM214 (ENSSMRG00000013048) #37 MAPRE3 (ENSSMRG00000013049) #36 DPYSL5 (ENSSMRG00000013050) #35 DNMT3A (ENSSMRG00000013051) #17 ENSSMRG00000013053 #18 ASXL2 (ENSSMRG00000013055) #19 KIF3C (ENSSMRG00000013056) #21 RAB10 (ENSSMRG00000013058) #22 GAREM2 (ENSSMRG00000013059) #23 HADHA (ENSSMRG00000013060) #24 HADHB (ENSSMRG00000013061) #25 ADGRF3 (ENSSMRG00000013062) #26 ENSSMRG00000013063 SELENOI (ENSSMRG00000013064) #27 PBK (ENSSMRG00000013066) ESCO2 (ENSSMRG00000013067) CCDC25 (ENSSMRG00000013068) SCARA3 (ENSSMRG00000013069) CLU (ENSSMRG00000013070) SLC35F6 (ENSSMRG00000013072) #33 KCNK3 (ENSSMRG00000013073) #32 ENSSMRG00000013074 ENSSMRG00000013077 Toxicofera ANCESTRAL SPECIES 36 ENSGT00950000182902.a.d ENSGT00950000185281 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00720000108839 ENSGT00940000158598 ENSGT00950000185082 ENSGT00390000004380 ENSGT00940000158238 ENSGT00530000063668.B ENSGT00390000017237 #33 ENSGT00940000160868 ENSGT01030000234597.a.b.a ENSGT00390000016811 #16 ENSGT00390000002143.b #15 Elapidae ANCESTRAL SPECIES ENSGT00950000182902.a.d ENSGT00950000185281 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00950000183117.b #27 ENSGT00720000108839 ENSGT00940000158598 ENSGT00950000185082 ENSGT00390000004380 ENSGT00940000158238 ENSGT00530000063668.B ENSGT00390000017237 #33 ENSGT01030000234597.a.b.a ENSGT00390000016811 #16 ENSGT00390000002143.b #15 ENSGT00950000183074.B.a.a Elapidae_a ANCESTRAL SPECIES 59 ENSGT00950000182902.a.d ENSGT00950000185281 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00950000183117.b #27 ENSGT00720000108839 ENSGT00940000158598 ENSGT00950000185082 ENSGT00990000211035 ENSGT00390000004380 ENSGT00940000158238 ENSGT00530000063668.B ENSGT00390000017237 #33 ENSGT01030000234597.a.b.a ENSGT00390000002143.b #15 ENSGT00950000183074.B.a.a Acanthophiinae ANCESTRAL SPECIES 11 ENSGT00950000182902.a.d ENSGT00950000185281 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00950000183117.b #27 ENSGT00720000108839 ENSGT00940000158598 ENSGT00950000185082 ENSGT00390000004380 ENSGT00940000158238 ENSGT00530000063668.B ENSGT00390000017237 #33 ENSGT01030000234597.a.b.a ENSGT00390000002143.b #15 ENSGT00950000183074.B.a.a ENSGT00940000153804.A #28 Mainland tiger snake MODERN SPECIES 38 ATRAID (ENSNSUG00000005527) SLC5A6 (ENSNSUG00000005526) PREB (ENSNSUG00000005524) ABHD1 (ENSNSUG00000005523) ENSNSUG00000005522 KHK (ENSNSUG00000005521) ENSNSUG00000005519 EMILIN1 (ENSNSUG00000005518) AGBL5 (ENSNSUG00000005482) MAPRE3 (ENSNSUG00000005481) #36 DPYSL5 (ENSNSUG00000005480) #35 DNMT3A (ENSNSUG00000005469) #17 ENSNSUG00000005459 #18 ASXL2 (ENSNSUG00000005446) #19 KIF3C (ENSNSUG00000005443) #21 RAB10 (ENSNSUG00000005440) #22 GAREM2 (ENSNSUG00000005416) #23 HADHA (ENSNSUG00000005414) #24 HADHB (ENSNSUG00000005411) #25 SELENOI (ENSNSUG00000005342) #27 PBK (ENSNSUG00000005340) ESCO2 (ENSNSUG00000005333) ENSNSUG00000005331 CCDC25 (ENSNSUG00000005321) SCARA3 (ENSNSUG00000005320) CLU (ENSNSUG00000005317) SLC35F6 (ENSNSUG00000005316) #33 ENSNSUG00000005315 STMN4 (ENSNSUG00000005301) POMC (ENSNSUG00000005300) #16 EFR3B (ENSNSUG00000005297) #15 Eastern brown snake MODERN SPECIES 40 ENSPTXG00000010447 KHK (ENSPTXG00000010448) ENSPTXG00000010449 EMILIN1 (ENSPTXG00000010450) OST4 (ENSPTXG00000010451) AGBL5 (ENSPTXG00000010452) TMEM214 (ENSPTXG00000010453) #37 MAPRE3 (ENSPTXG00000010454) #36 DPYSL5 (ENSPTXG00000010455) #35 DNMT3A (ENSPTXG00000010459) #17 ENSPTXG00000011350 #18 ENSPTXG00000011351 #18 ENSPTXG00000011352 ASXL2 (ENSPTXG00000011353) #19 KIF3C (ENSPTXG00000011354) #21 RAB10 (ENSPTXG00000011360) #22 GAREM2 (ENSPTXG00000011361) #23 HADHA (ENSPTXG00000011364) #24 HADHB (ENSPTXG00000011365) #25 SELENOI (ENSPTXG00000011366) #27 ENSPTXG00000011367 ENSPTXG00000011369 ENSPTXG00000011370 ENSPTXG00000011372 CCDC25 (ENSPTXG00000011373) SCARA3 (ENSPTXG00000005084) CLU (ENSPTXG00000005085) SLC35F6 (ENSPTXG00000005086) #33 STMN4 (ENSPTXG00000005087) Blue-lipped sea krait MODERN SPECIES 6704 RAB10 (ENSLLTG00000007586) #22 Indian cobra MODERN SPECIES PREB (ENSNNAG00000002904) ABHD1 (ENSNNAG00000002918) ENSNNAG00000002931 KHK (ENSNNAG00000002947) ENSNNAG00000002968 EMILIN1 (ENSNNAG00000002993) OST4 (ENSNNAG00000003002) AGBL5 (ENSNNAG00000003010) TMEM214 (ENSNNAG00000003033) #37 MAPRE3 (ENSNNAG00000000162) #36 DPYSL5 (ENSNNAG00000000166) #35 DNMT3A (ENSNNAG00000000172) #17 ENSNNAG00000000188 #18 ASXL2 (ENSNNAG00000000202) #19 KIF3C (ENSNNAG00000000207) #21 RAB10 (ENSNNAG00000000210) #22 GAREM2 (ENSNNAG00000000215) #23 HADHA (ENSNNAG00000000220) #24 HADHB (ENSNNAG00000000228) #25 SELENOI (ENSNNAG00000000233) #27 SCARA3 (ENSNNAG00000000236) CLU (ENSNNAG00000000239) SLC35F6 (ENSNNAG00000000242) #33 STMN4 (ENSNNAG00000000248) ENSNNAG00000000253 #16 EFR3B (ENSNNAG00000000274) #15 SCARA5 (ENSNNAG00000000358) OTOF (ENSNNAG00000000403) #29 FAM166C (ENSNNAG00000000454) #30 CIB4 (ENSNNAG00000000465) #31 KCNK3 (ENSNNAG00000000490) #32 Lizard MODERN SPECIES 1747 ENSACAG00000036571 #22 Archelosauria ANCESTRAL SPECIES 1 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.t.b ##22 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00390000008161.b ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT00940000158238 ENSGT00390000004380 ENSGT00950000185082 Archosauria ANCESTRAL SPECIES 3 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.t.b ##22 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00390000008161.b ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT00940000158238 ENSGT00390000004380 ENSGT00950000185082 ENSGT00940000158598 Aves ANCESTRAL SPECIES 38 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.t.b ##22 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.g.a ENSGT00940000154393.h ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT00940000158238 ENSGT00390000004380 ENSGT00950000185082 ENSGT00940000158598 African ostrich MODERN SPECIES 432 ENSSCUG00000009465 #18 ASXL2 (ENSSCUG00000009480) #19 KIF3C (ENSSCUG00000009486) #21 RAB10 (ENSSCUG00000009489) #22 HADHA (ENSSCUG00000009494) #24 HADHB (ENSSCUG00000009497) #25 ENSSCUG00000009500 ENSSCUG00000009503 SELENOI (ENSSCUG00000009509) #27 Neognathae ANCESTRAL SPECIES 2 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.t.b ##22 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.g.a ENSGT00940000154393.h ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT01100000263560.b ENSGT00940000158238 ENSGT00390000004380 ENSGT00950000185082 Galloanserae ANCESTRAL SPECIES 2 ENSGT00950000185281 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00390000008161.b ENSGT00940000157269.a.a.d ENSGT00940000158299 ENSGT00940000158614 ENSGT00510000049722 ENSGT00940000164057.a ENSGT00940000164057.b ENSGT00390000007091 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 Phasianidae ANCESTRAL SPECIES 28 ENSGT00940000160891 ENSGT00940000154473.b ENSGT00940000154004.b ENSGT00940000164252.a.b ENSGT01020000230412.B.a.c.a ENSGT00940000161480 ENSGT00390000018632 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.g.a ENSGT00940000157269.a.a.d ENSGT00940000158299 ENSGT00940000158614 ENSGT00510000049722 ENSGT00940000164057.a ENSGT00940000164057.b ENSGT00390000007091 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 Phasianidae_b ANCESTRAL SPECIES 29 ENSGT00940000160891 ENSGT00940000154473.b ENSGT00940000154004.b ENSGT00940000164252.a.b ENSGT01020000230412.B.a.c.a ENSGT00940000161480 ENSGT00390000018632 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.g.a ENSGT00940000157269.a.a.d ENSGT00940000158299 ENSGT00940000158614 ENSGT00510000049722 ENSGT00940000164057.a ENSGT00940000164057.b ENSGT00390000007091 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 Turkey MODERN SPECIES 11 NRBP1 (ENSMGAG00000014070) PPM1G (ENSMGAG00000014072) ENSMGAG00000014073 ZNF513 (ENSMGAG00000014074) SNX17 (ENSMGAG00000014075) EIF2B4 (ENSMGAG00000014076) ENSMGAG00000014953 OST4 (ENSMGAG00000021231) AGBL5 (ENSMGAG00000014071) TMEM214 (ENSMGAG00000014954) #37 DPYSL5 (ENSMGAG00000008087) #35 DNMT3A (ENSMGAG00000014078) #17 ENSMGAG00000014080 #18 ASXL2 (ENSMGAG00000014086) #19 ENSMGAG00000019139 #21 RAB10 (ENSMGAG00000014088) #22 GAREM2 (ENSMGAG00000022446) #23 HADHA (ENSMGAG00000014090) #24 HADHB (ENSMGAG00000014094) #25 ENSMGAG00000015651 ENSMGAG00000022025 SELENOI (ENSMGAG00000014102) #27 PTK2B (ENSMGAG00000014100) ENSMGAG00000014105 EPHX2 (ENSMGAG00000014107) ENSMGAG00000014114 NUGGC (ENSMGAG00000020967) SCARA5 (ENSMGAG00000014119) PBK (ENSMGAG00000014121) ESCO2 (ENSMGAG00000014122) CCDC25 (ENSMGAG00000014123) Chicken MODERN SPECIES 22 ENSGALG00010009286 UCN (ENSGALG00010011472) TRIM54 (ENSGALG00010009309) ENSGALG00010009322 ENSGALG00010009332 SLC30A3 (ENSGALG00010009343) GTF3C2 (ENSGALG00010009351) MAPRE3 (ENSGALG00010009392) #36 DPYSL5 (ENSGALG00010009437) #35 DNMT3A (ENSGALG00010009469) #17 ENSGALG00010011908 #18 ENSGALG00010009526 ASXL2 (ENSGALG00010009383) #19 KIF3C (ENSGALG00010009530) #21 ENSGALG00010009537 RAB10 (ENSGALG00010009540) #22 GAREM2 (ENSGALG00010009546) #23 HADHA (ENSGALG00010009551) #24 HADHB (ENSGALG00010009562) #25 ENSGALG00010009615 SELENOI (ENSGALG00010009876) #27 PTK2B (ENSGALG00010009972) CHRNA2 (ENSGALG00010010053) EPHX2 (ENSGALG00010010136) ENSGALG00010011927 ENSGALG00010010153 NUGGC (ENSGALG00010010171) SCARA5 (ENSGALG00010010206) PBK (ENSGALG00010010218) ESCO2 (ENSGALG00010010243) CCDC25 (ENSGALG00010010284) Japanese quail MODERN SPECIES 21 AGBL5 (ENSCJPG00005011992) TMEM214 (ENSCJPG00005011993) #37 MPV17 (ENSCJPG00005012115) ENSCJPG00005012123 UCN (ENSCJPG00005012124) ENSCJPG00005012125 GTF3C2 (ENSCJPG00005012126) MAPRE3 (ENSCJPG00005012216) #36 DPYSL5 (ENSCJPG00005012217) #35 ENSCJPG00005012251 DNMT3A (ENSCJPG00005012252) #17 ENSCJPG00005012492 #18 ASXL2 (ENSCJPG00005012928) #19 KIF3C (ENSCJPG00005012932) #21 ENSCJPG00005012964 RAB10 (ENSCJPG00005012965) #22 GAREM2 (ENSCJPG00005012966) #23 HADHA (ENSCJPG00005012967) #24 HADHB (ENSCJPG00005012968) #25 ENSCJPG00005012969 ENSCJPG00005012970 SELENOI (ENSCJPG00005012971) #27 PTK2B (ENSCJPG00005012972) CHRNA2 (ENSCJPG00005012973) EPHX2 (ENSCJPG00005012975) ENSCJPG00005012976 ENSCJPG00005012977 SCARA5 (ENSCJPG00005012978) PBK (ENSCJPG00005012979) ESCO2 (ENSCJPG00005012980) CCDC25 (ENSCJPG00005012981) Anatidae ANCESTRAL SPECIES 96 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00390000008161.b ENSGT00940000157269.a.a.d ENSGT00940000158299 ENSGT00940000158614 ENSGT00510000049722 ENSGT00940000164057.a ENSGT00940000164057.b Duck MODERN SPECIES 21 GPN1 (ENSAPLG00000003530) ZNF512 (ENSAPLG00000003840) FNDC4 (ENSAPLG00000004123) ENSAPLG00000004165 IFT172 (ENSAPLG00000004257) ENSAPLG00000030912 NRBP1 (ENSAPLG00000005366) PPM1G (ENSAPLG00000021278) ENSAPLG00000018551 ENSAPLG00000004980 #18 ENSAPLG00000028298 ASXL2 (ENSAPLG00000005877) #19 RAB10 (ENSAPLG00000018031) #22 GAREM2 (ENSAPLG00000025887) #23 HADHA (ENSAPLG00000003803) #24 HADHB (ENSAPLG00000003436) #25 ENSAPLG00000003434 SELENOI (ENSAPLG00000009483) #27 ENSAPLG00000012254 ENSAPLG00000012641 FAM166C (ENSAPLG00000010916) #30 ENSAPLG00000021729 ENSAPLG00000017924 ENSAPLG00000012374 EFR3B (ENSAPLG00000012384) #15 ENSAPLG00000022349 DNAJC27 (ENSAPLG00000012805) #14 ADCY3 (ENSAPLG00000013028) #13 Pink-footed goose MODERN SPECIES 318 DPYSL5 (ENSABRG00000011572) #35 DNMT3A (ENSABRG00000011654) #17 ENSABRG00000011679 #18 ASXL2 (ENSABRG00000011729) #19 KIF3C (ENSABRG00000011741) #21 RAB10 (ENSABRG00000011744) #22 GAREM2 (ENSABRG00000011755) #23 HADHA (ENSABRG00000011792) #24 HADHB (ENSABRG00000011814) #25 ENSABRG00000011839 Neognathae_b ANCESTRAL SPECIES 1 ENSGT00950000182902.a.d ENSGT00950000185281 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.g.a ENSGT00940000154393.h ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT01100000263560.b ENSGT00940000158238 ENSGT00390000004380 ENSGT00950000185082 ENSGT00940000158598 Neognathae_c ANCESTRAL SPECIES 10 ENSGT00940000161395 ENSGT00390000018031 ENSGT00950000182902.a.d ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.g.a ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT01100000263560.b ENSGT00940000158238 ENSGT00390000004380 ENSGT00950000185082 ENSGT00940000158598 ENSGT00720000108839 Golden eagle MODERN SPECIES 6 TCF23 (ENSACCG00020014727) PREB (ENSACCG00020014745) ABHD1 (ENSACCG00020014767) ENSACCG00020014792 EMILIN1 (ENSACCG00020014857) OST4 (ENSACCG00020014905) AGBL5 (ENSACCG00020014917) TMEM214 (ENSACCG00020014942) #37 MAPRE3 (ENSACCG00020014992) #36 DPYSL5 (ENSACCG00020015004) #35 DNMT3A (ENSACCG00020015155) #17 ENSACCG00020015332 #18 ASXL2 (ENSACCG00020005555) #19 ENSACCG00020005579 KIF3C (ENSACCG00020005593) #21 RAB10 (ENSACCG00020005616) #22 GAREM2 (ENSACCG00020005641) #23 HADHA (ENSACCG00020005747) #24 HADHB (ENSACCG00020005793) #25 ENSACCG00020005815 SELENOI (ENSACCG00020005836) #27 OTOF (ENSACCG00020005945) #29 FAM166C (ENSACCG00020006030) #30 KCNK3 (ENSACCG00020006041) #32 SLC35F6 (ENSACCG00020006053) #33 CLU (ENSACCG00020006066) ENSACCG00020006081 SCARA3 (ENSACCG00020006092) CCDC25 (ENSACCG00020006104) ESCO2 (ENSACCG00020006123) PBK (ENSACCG00020006136) Kakapo MODERN SPECIES 23 GTF3C2 (ENSSHBG00005017620) TMEM214 (ENSSHBG00005017609) #37 OST4 (ENSSHBG00005017605) AGBL5 (ENSSHBG00005017594) EMILIN1 (ENSSHBG00005017589) ENSSHBG00005017581 KHK (ENSSHBG00005017576) PREB (ENSSHBG00005017570) ATRAID (ENSSHBG00005017557) MAPRE3 (ENSSHBG00005017542) #36 DPYSL5 (ENSSHBG00005017531) #35 DNMT3A (ENSSHBG00005017508) #17 ENSSHBG00005015404 #18 ASXL2 (ENSSHBG00005015259) #19 KIF3C (ENSSHBG00005015239) #21 RAB10 (ENSSHBG00005015229) #22 GAREM2 (ENSSHBG00005015219) #23 HADHA (ENSSHBG00005015191) #24 HADHB (ENSSHBG00005015179) #25 ENSSHBG00005015164 ENSSHBG00005015158 SELENOI (ENSSHBG00005015151) #27 OTOF (ENSSHBG00005011947) #29 FAM166C (ENSSHBG00005011584) #30 KCNK3 (ENSSHBG00005011570) #32 SLC35F6 (ENSSHBG00005011551) #33 CLU (ENSSHBG00005011529) ENSSHBG00005011516 SCARA3 (ENSSHBG00005011496) CCDC25 (ENSSHBG00005011479) ENSSHBG00005011457 Passeriformes ANCESTRAL SPECIES 48 ENSGT00940000155731 ENSGT00390000018031 ENSGT00950000185281 ENSGT00390000007458.i ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00940000156975.t.b ##22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.g.a ENSGT00940000154393.h ENSGT00940000155086.C #29 ENSGT00940000158248.b #32 Passeriformes_d ANCESTRAL SPECIES 58 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b.p #21 ENSGT00940000156975.u #22 ENSGT00940000156975.t.b ##22 ENSGT00530000063834.e.b #23 ENSGT00940000156975.t.a ##22 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.g.a ENSGT00940000154393.h.j.a ENSGT00940000155086.C #29 ENSGT00940000158248.b #32 Passeriformes_g ANCESTRAL SPECIES 78 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b.p #21 ENSGT00940000156975.u #22 ENSGT00940000156975.t.b ##22 ENSGT00530000063834.e.b #23 ENSGT00940000156975.t.a ##22 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.g.a ENSGT00940000154393.h.j.a ENSGT00940000155086.C #29 Passeroidea ANCESTRAL SPECIES 84 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b.p #21 ENSGT00940000156975.u #22 ENSGT00940000156975.t.b ##22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.h.j.a ENSGT00940000154393.g.a ENSGT00940000155086.C #29 Common canary MODERN SPECIES 128 KIF3C (ENSSCAG00000015678) #21 RAB10 (ENSSCAG00000015676) #22 HADHA (ENSSCAG00000015669) #24 HADHB (ENSSCAG00000015666) #25 Flycatcher DUPLICATION Flycatcher MODERN SPECIES 202 ENSFALG00000028952 #22 Flycatcher MODERN SPECIES 275 ENSFALG00000024442 DTNB (ENSFALG00000012409) ENSFALG00000023000 ##19 ENSFALG00000026256 #19 ENSFALG00000026262 ENSFALG00000023692 #21 RAB10 (ENSFALG00000012484) #22 HADHA (ENSFALG00000012494) #24 HADHB (ENSFALG00000012517) #25 ENSFALG00000012537 Cryptodira ANCESTRAL SPECIES 1 ENSGT00390000018031 ENSGT00950000182902.a.d ENSGT00950000185281 ENSGT00390000007458.i ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00390000008161.b ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT00940000158238 ENSGT00390000004380 ENSGT00940000158598 Chinese turtle MODERN SPECIES 1878 RAB10 (ENSPSIG00000017938) #22 Testudinoidea ANCESTRAL SPECIES 12 ENSGT00940000161395 ENSGT00390000018031 ENSGT00950000182902.a.d ENSGT00950000185281 ENSGT00390000007458.i ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.c #36 ENSGT01030000234527.A.a.a.b.d #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00390000008161.b ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT00940000158238 ENSGT00390000004380 ENSGT00940000158598 Testudinidae ANCESTRAL SPECIES 44 ENSGT00390000018031 ENSGT00950000182902.a.d ENSGT00950000185281 ENSGT00390000007458.i ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.d #36 ENSGT00490000043329.a.b.c #36 ENSGT01030000234527.A.a.a.b.d #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00940000154393.g.a.n ENSGT00940000154393.h ENSGT00950000183117.b #27 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT00940000158238 ENSGT00390000004380 Goode s thornscrub tortoise MODERN SPECIES 17 ENSGEVG00005006364 PREB (ENSGEVG00005006391) ABHD1 (ENSGEVG00005006443) ENSGEVG00005006479 KHK (ENSGEVG00005006497) EMILIN1 (ENSGEVG00005006581) OST4 (ENSGEVG00005006651) AGBL5 (ENSGEVG00005006674) TMEM214 (ENSGEVG00005006748) #37 MAPRE3 (ENSGEVG00005006924) #36 DPYSL5 (ENSGEVG00005006947) #35 DNMT3A (ENSGEVG00005006987) #17 ENSGEVG00005007053 #18 ASXL2 (ENSGEVG00005007100) #19 KIF3C (ENSGEVG00005007123) #21 RAB10 (ENSGEVG00005007178) #22 GAREM2 (ENSGEVG00005007252) #23 HADHA (ENSGEVG00005007454) #24 HADHB (ENSGEVG00005007566) #25 ADGRF3 (ENSGEVG00005007643) #26 ENSGEVG00005007728 ENSGEVG00005007753 ENSGEVG00005007778 ENSGEVG00005007798 SELENOI (ENSGEVG00005007815) #27 DRC1 (ENSGEVG00005007884) #28 OTOF (ENSGEVG00005008198) #29 FAM166C (ENSGEVG00005008643) #30 KCNK3 (ENSGEVG00005008695) #32 SLC35F6 (ENSGEVG00005008714) #33 CLU (ENSGEVG00005008738) Abingdon island giant tortoise MODERN SPECIES 639 RAB10 (ENSCABG00000014293) #22 GAREM2 (ENSCABG00000014256) #23 HADHA (ENSCABG00000014250) #24 HADHB (ENSCABG00000014227) #25 ENSCABG00000014220 #26 Emydidae ANCESTRAL SPECIES 87 ENSGT01030000234527.A.a.a.b.d #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00990000205100.E.a ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00390000008161.b ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT00940000158238 ENSGT00390000004380 ENSGT00940000158598 painted turtle MODERN SPECIES 828 ENSCPBG00000010860 #35 DNMT3A (ENSCPBG00000010847) #17 ENSCPBG00000010813 #18 ENSCPBG00000010794 ENSCPBG00000010791 ASXL2 (ENSCPBG00000010779) #19 KIF3C (ENSCPBG00000010772) #21 RAB10 (ENSCPBG00000010768) #22 GAREM2 (ENSCPBG00000010750) #23 HADHA (ENSCPBG00000010733) #24 HADHB (ENSCPBG00000010721) #25 ENSCPBG00000010715 #26 ENSCPBG00000010711 ENSCPBG00000010704 ENSCPBG00000010703 SELENOI (ENSCPBG00000010697) #27 DRC1 (ENSCPBG00000010693) #28 OTOF (ENSCPBG00000010661) #29 FAM166C (ENSCPBG00000010645) #30 CIB4 (ENSCPBG00000010641) #31 ENSCPBG00000010639 KCNK3 (ENSCPBG00000010637) #32 ENSCPBG00000010636 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 548 ENSTMTG00000011514 #22 Three-toed box turtle MODERN SPECIES 258 TMEM214 (ENSTMTG00000011120) #37 AGBL5 (ENSTMTG00000011035) ENSTMTG00000010979 #35 DNMT3A (ENSTMTG00000010635) #17 ENSTMTG00000010572 ENSTMTG00000009665 #18 ENSTMTG00000009512 ENSTMTG00000009489 ASXL2 (ENSTMTG00000009477) #19 KIF3C (ENSTMTG00000009444) #21 RAB10 (ENSTMTG00000009428) #22 GAREM2 (ENSTMTG00000009405) #23 HADHA (ENSTMTG00000009349) #24 HADHB (ENSTMTG00000009311) #25 ENSTMTG00000009285 #26 ENSTMTG00000009277 ENSTMTG00000009252 Anura ANCESTRAL SPECIES 34 ENSGT00390000018031 ENSGT00950000182902.a.d ENSGT00950000185281 ENSGT00390000007458.i ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.a.a ##18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.t.b ##22 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541.d #26 ENSGT00940000161395 ENSGT00940000155731 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00940000166976 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT00940000158238 ENSGT00390000004380 ENSGT00940000158598 Leishan spiny toad MODERN SPECIES 7 ENSLLEG00000008808 ENSLLEG00000008851 ENSLLEG00000008879 ENSLLEG00000008886 ENSLLEG00000008901 ENSLLEG00000008916 ENSLLEG00000009000 OST4 (ENSLLEG00000009104) AGBL5 (ENSLLEG00000009135) ENSLLEG00000009260 ENSLLEG00000009309 #37 DNMT3A (ENSLLEG00000009608) #17 ENSLLEG00000010075 KIF3C (ENSLLEG00000010140) #21 ENSLLEG00000010412 RAB10 (ENSLLEG00000010480) #22 ENSLLEG00000010550 GAREM2 (ENSLLEG00000010583) #23 ENSLLEG00000010679 ENSLLEG00000010695 ENSLLEG00000010776 ENSLLEG00000010789 ENSLLEG00000010811 ENSLLEG00000010824 ENSLLEG00000010845 ENSLLEG00000010857 ENSLLEG00000010867 ENSLLEG00000010883 HADHA (ENSLLEG00000005730) #24 ENSLLEG00000005800 HADHB (ENSLLEG00000005858) #25 Tetrapoda DUPLICATION Tetrapoda ANCESTRAL SPECIES ENSGT00940000156975.t.a ##22 Amniota ANCESTRAL SPECIES ENSGT00940000156975.t.a ##22 Sauria ANCESTRAL SPECIES ENSGT00940000156975.t.a ##22 Archelosauria ANCESTRAL SPECIES ENSGT00940000156975.t.a ##22 Archosauria ANCESTRAL SPECIES ENSGT00940000156975.t.a ##22 Aves ANCESTRAL SPECIES ENSGT00940000156975.t.a ##22 Neognathae ANCESTRAL SPECIES ENSGT00940000156975.t.a ##22 Neognathae_b ANCESTRAL SPECIES ENSGT00940000156975.t.a ##22 Passeriformes ANCESTRAL SPECIES ENSGT00940000156975.t.a ##22 Passeriformes_d ANCESTRAL SPECIES 58 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b.p #21 ENSGT00940000156975.u #22 ENSGT00940000156975.t.b ##22 ENSGT00530000063834.e.b #23 ENSGT00940000156975.t.a ##22 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.g.a ENSGT00940000154393.h.j.a ENSGT00940000155086.C #29 ENSGT00940000158248.b #32 Passeriformes_g ANCESTRAL SPECIES 78 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b.p #21 ENSGT00940000156975.u #22 ENSGT00940000156975.t.b ##22 ENSGT00530000063834.e.b #23 ENSGT00940000156975.t.a ##22 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.g.a ENSGT00940000154393.h.j.a ENSGT00940000155086.C #29 Passeroidea ANCESTRAL SPECIES ENSGT00940000156975.t.a ##22 Zebra finch MODERN SPECIES 23 ENSTGUG00000028646 #23 ENSTGUG00000027186 ENSTGUG00000022620 #24 ENSTGUG00000014433 #25 ENSTGUG00000029279 ENSTGUG00000019591 #27 ENSTGUG00000015724 ENSTGUG00000021161 ENSTGUG00000026856 #29 ENSTGUG00000029004 ENSTGUG00000027496 ENSTGUG00000024393 ENSTGUG00000027137 ENSTGUG00000024576 #19 ENSTGUG00000025070 #21 ENSTGUG00000018963 ##22 ENSTGUG00000028224 #23 ENSTGUG00000029360 ENSTGUG00000014477 #24 ENSTGUG00000020253 #25 ENSTGUG00000019652 ENSTGUG00000014407 #27 ENSTGUG00000028069 ENSTGUG00000022181 #29 ENSTGUG00000021006 ENSTGUG00000024251 SCARA5 (ENSTGUG00000022151) ENSTGUG00000019284 ENSTGUG00000021901 ENSTGUG00000027492 CLU (ENSTGUG00000028547) Medium ground finch MODERN SPECIES 333 ENSGFOG00000013192 #18 ENSGFOG00000013194 KIF3C (ENSGFOG00000013199) #21 RAB10 (ENSGFOG00000013203) ##22 HADHA (ENSGFOG00000013213) #24 HADHB (ENSGFOG00000013239) #25 ENSGFOG00000013244 ENSGFOG00000013245 SELENOI (ENSGFOG00000013249) #27 Tetrapoda ANCESTRAL SPECIES 117 ENSGT00950000185281 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00980000198967 ENSGT00940000158032 ENSGT00390000016516 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.t.b ##22 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 Amniota ANCESTRAL SPECIES 1 ENSGT00950000182902.a.d ENSGT00940000154141.A ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.t.b ##22 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT00940000158238 ENSGT00390000004380 Sauria ANCESTRAL SPECIES 1 ENSGT00950000182902.a.d ENSGT00940000154141.A ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.t.b ##22 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00390000008161.b ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT00940000158238 Archelosauria ANCESTRAL SPECIES 1 ENSGT00950000182902.a.d ENSGT00950000185281 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.t.b ##22 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541 #26 ENSGT00390000008161.b ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT00940000158238 Archosauria ANCESTRAL SPECIES 3 ENSGT00950000182902.a.d ENSGT00950000185281 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.t.b ##22 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00390000008161.b ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000161840 #31 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT00940000158238 ENSGT00390000004380 Aves ANCESTRAL SPECIES 38 ENSGT00950000182902.a.d ENSGT00950000185281 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.t.b ##22 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.g.a ENSGT00940000154393.h ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT00940000158238 ENSGT00390000004380 Neognathae ANCESTRAL SPECIES 2 ENSGT00950000182902.a.d ENSGT00950000185281 ENSGT00390000007458.i ENSGT00940000165510 ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.t.b ##22 ENSGT00940000177261 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.g.a ENSGT00940000154393.h ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00390000018634 #30 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT01100000263560.b ENSGT00940000158238 Neognathae_b ANCESTRAL SPECIES ENSGT00940000156975.t.b ##22 Passeriformes ANCESTRAL SPECIES 48 ENSGT00390000018031 ENSGT00950000185281 ENSGT00390000007458.i ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.u #22 ENSGT00940000156975.t.b ##22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.g.a ENSGT00940000154393.h ENSGT00940000155086.C #29 ENSGT00940000158248.b #32 Passeriformes_d ANCESTRAL SPECIES 58 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b.p #21 ENSGT00940000156975.u #22 ENSGT00940000156975.t.b ##22 ENSGT00530000063834.e.b #23 ENSGT00940000156975.t.a ##22 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.g.a ENSGT00940000154393.h.j.a ENSGT00940000155086.C #29 ENSGT00940000158248.b #32 Passeriformes_g ANCESTRAL SPECIES 78 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b.p #21 ENSGT00940000156975.u #22 ENSGT00940000156975.t.b ##22 ENSGT00530000063834.e.b #23 ENSGT00940000156975.t.a ##22 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.g.a ENSGT00940000154393.h.j.a ENSGT00940000155086.C #29 Passeroidea ANCESTRAL SPECIES 84 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b.p #21 ENSGT00940000156975.u #22 ENSGT00940000156975.t.b ##22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000154393.h.j.a ENSGT00940000154393.g.a ENSGT00940000155086.C #29 Zebra finch MODERN SPECIES 23 ENSTGUG00000014964 ENSTGUG00000023298 ENSTGUG00000020990 ENSTGUG00000022267 ENSTGUG00000023158 OST4 (ENSTGUG00000028212) ENSTGUG00000023136 ENSTGUG00000024716 #37 ENSTGUG00000028117 #36 DPYSL5 (ENSTGUG00000028796) #35 DNMT3A (ENSTGUG00000020883) #17 ENSTGUG00000026716 #18 ENSTGUG00000022206 ENSTGUG00000021185 #19 ENSTGUG00000023276 #21 ENSTGUG00000021481 ##22 ENSTGUG00000028646 #23 ENSTGUG00000027186 ENSTGUG00000022620 #24 ENSTGUG00000014433 #25 ENSTGUG00000029279 ENSTGUG00000019591 #27 ENSTGUG00000015724 ENSTGUG00000021161 ENSTGUG00000026856 #29 ENSTGUG00000029004 ENSTGUG00000027496 ENSTGUG00000024393 ENSTGUG00000027137 ENSTGUG00000024576 #19 ENSTGUG00000025070 #21 Great tit MODERN SPECIES 281 ENSPMJG00000001146 KIF3C (ENSPMJG00000001150) #21 RAB10 (ENSPMJG00000001155) ##22 GAREM2 (ENSPMJG00000001158) #23 HADHA (ENSPMJG00000001169) #24 HADHB (ENSPMJG00000001177) #25 ENSPMJG00000001200 Anura ANCESTRAL SPECIES 34 ENSGT00390000018632 ENSGT00390000018031 ENSGT00950000182902.a.d ENSGT00950000185281 ENSGT00390000007458.i ENSGT01030000234633.A ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.a.a ##18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b #21 ENSGT00940000156975.t.b ##22 ENSGT00940000156975.u #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00940000161541.d #26 ENSGT00940000161395 ENSGT00940000155731 ENSGT00940000153804.A #28 ENSGT00940000155086.C #29 ENSGT00940000166976 ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00530000063668.B ENSGT00940000158238 ENSGT00390000004380 Frog MODERN SPECIES 5 efr3b (ENSXETG00000017509) #15 pomc (ENSXETG00000017532) #16 ENSXETG00000030926 stmn4 (ENSXETG00000017530) ptk2b (ENSXETG00000017538) chrna2 (ENSXETG00000017553) ephx2 (ENSXETG00000017581) ENSXETG00000046510 ENSXETG00000039990 ENSXETG00000035690 ENSXETG00000044272 ENSXETG00000046509 ENSXETG00000044020 asxl2 (ENSXETG00000003167) #19 kif3c (ENSXETG00000024790) #21 rab10 (ENSXETG00000044662) ##22 garem2 (ENSXETG00000033300) #23 hadha (ENSXETG00000026457) #24 hadhb (ENSXETG00000003203) #25 ENSXETG00000042101 slc5a6 (ENSXETG00000043966) ENSXETG00000046711 ENSXETG00000041658 ENSXETG00000045469 ENSXETG00000037814 ENSXETG00000047749 ENSXETG00000044673 ENSXETG00000048160 ENSXETG00000041471 ENSXETG00000046706 ENSXETG00000047836 Coelacanth MODERN SPECIES 1578 ENSLACG00000002145 #21 ENSLACG00000005197 #21 RAB10 (ENSLACG00000006208) #22 GAREM2 (ENSLACG00000009792) #23 HADHA (ENSLACG00000011020) #24 Actinopterygii ANCESTRAL SPECIES 180 ENSGT00980000198967 ENSGT00940000158032 ENSGT00390000016516 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b.t #21 ENSGT00940000177261 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00900000143764 ENSGT00950000182848.c.b.b.b ENSGT00390000016613.d ENSGT00940000156439.c ENSGT00940000167629 ENSGT00950000182844.b.a Reedfish DUPLICATION Reedfish MODERN SPECIES 6 capn8 (ENSECRG00000018810) capn8 (ENSECRG00000019355) capn2a (ENSECRG00000019831) capn1a (ENSECRG00000019872) mrps28 (ENSECRG00000019896) ENSECRG00000019909 ENSECRG00000019926 mrpl14 (ENSECRG00000019943) TMEM63B (ENSECRG00000019978) ENSECRG00000020063 ENSECRG00000020095 slc29a1a (ENSECRG00000020113) ENSECRG00000020150 KLHDC3 (ENSECRG00000020224) ENSECRG00000020244 rab10 (ENSECRG00000020264) #22 efcab1 (ENSECRG00000020270) hadhb (ENSECRG00000020278) #25 ENSECRG00000020286 morn2 (ENSECRG00000020300) tmem264 (ENSECRG00000020317) ENSECRG00000020341 ENSECRG00000020479 ENSECRG00000020556 mrpl2 (ENSECRG00000020564) ENSECRG00000020591 soul4 (ENSECRG00000020641) ptk7a (ENSECRG00000020679) srfb (ENSECRG00000020770) CUL7 (ENSECRG00000020812) dnph1 (ENSECRG00000020864) Reedfish MODERN SPECIES 11 ENSECRG00000002045 ENSECRG00000002055 ENSECRG00000002073 ENSECRG00000002095 ENSECRG00000002131 SCAF8 (ENSECRG00000002175) TIAM2 (ENSECRG00000002253) tfb1m (ENSECRG00000002284) CLDN20 (ENSECRG00000002298) NOX3 (ENSECRG00000002409) ENSECRG00000002831 arid1b (ENSECRG00000002888) tmem242 (ENSECRG00000002981) zdhhc14 (ENSECRG00000002997) LGALS8 (ENSECRG00000003017) rab10 (ENSECRG00000003037) #22 GAREM2 (ENSECRG00000003070) #23 hadhab (ENSECRG00000003145) #24 hadhb (ENSECRG00000003179) #25 tfap2d (ENSECRG00000003201) tfap2b (ENSECRG00000003224) ENSECRG00000003255 ENSECRG00000003259 ENSECRG00000003277 CRISP2 (ENSECRG00000003288) CRISP1 (ENSECRG00000003302) rhag (ENSECRG00000003316) si:dkey-119f1.1 (ENSECRG00000003334) GEN1 (ENSECRG00000003354) msgn1 (ENSECRG00000003368) ENSECRG00000003382 Neopterygii ANCESTRAL SPECIES 60 ENSGT00390000014654 ENSGT00940000153804.A #28 ENSGT00950000183117.b #27 ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459 #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b.t #21 ENSGT00940000177261 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677 #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00900000143764 ENSGT00950000182848.c.b.b.b ENSGT00390000016613.d ENSGT00940000156439.c ENSGT00940000167629 ENSGT00950000182844.b.a ENSGT00730000112900 ENSGT00390000002089.a.a.a ENSGT00940000156484.b ENSGT01030000235236 ENSGT00940000156989 Spotted gar MODERN SPECIES 647 CCDC170 (ENSLOCG00000016291) rmnd1 (ENSLOCG00000016293) zbtb2b (ENSLOCG00000016295) akap12b (ENSLOCG00000016296) mthfd1l (ENSLOCG00000016297) ENSLOCG00000016304 ENSLOCG00000016305 stx11a (ENSLOCG00000017995) tmem214 (ENSLOCG00000016307) #37 mapre3b (ENSLOCG00000016310) #36 dpysl5a (ENSLOCG00000016314) #35 dnmt3ab (ENSLOCG00000016317) #17 dtnbb (ENSLOCG00000016318) #18 ASXL2 (ENSLOCG00000016319) #19 KIF3C (ENSLOCG00000016321) #21 rab10 (ENSLOCG00000016323) #22 GAREM2 (ENSLOCG00000016328) #23 hadhab (ENSLOCG00000016329) #24 hadhb (ENSLOCG00000016333) #25 tfap2d (ENSLOCG00000016336) tfap2b (ENSLOCG00000016338) ENSLOCG00000016341 ENSLOCG00000016342 CRISP1 (ENSLOCG00000016346) rhag (ENSLOCG00000016348) si:ch211-22i13.2 (ENSLOCG00000016352) rd3 (ENSLOCG00000016354) slc30a1a (ENSLOCG00000016355) nek2 (ENSLOCG00000016356) lpgat1 (ENSLOCG00000016357) ints7 (ENSLOCG00000016358) Osteoglossocephalai ANCESTRAL SPECIES 60 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT00490000043329.a.b.g.a #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459.x.b #17 ENSGT00940000153897.b.a.a.b ##18 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.a.b #18 ENSGT00940000164272 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b.t #21 ENSGT00940000154677.b.a #24 ENSGT00940000177261 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.b.b #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00900000143764 ENSGT00950000182848.c.b.b.b ENSGT00390000016613.d ENSGT00940000156439.c ENSGT00940000167629 ENSGT00940000162013 ENSGT00950000182844.b.a ENSGT00730000112900 ENSGT00390000002089.a.a.a ENSGT00940000156484.b ENSGT01030000235236 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 96 ENSGT00940000153897.a ##18 ENSGT00490000043329.a.a.b ##36 ENSGT00950000183117.b #27 ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.a.j #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975.d.b #22 ENSGT00940000177261 ENSGT00940000156975.c #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.b.b #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00900000143764 ENSGT00950000182848.c.b.b.b ENSGT00390000016613.d ENSGT00950000182844.b.a ENSGT00390000002089.a.a.a ENSGT00940000156484.b.d ENSGT01030000235236 ENSGT00940000156989 ENSGT00950000182836.b.a.b ENSGT00390000011724 ENSGT00530000064210 P. kingsleyae MODERN SPECIES 223 wdr26b (ENSPKIG00000012991) fez2b (ENSPKIG00000013046) selenoi (ENSPKIG00000013107) #27 agbl5 (ENSPKIG00000013187) ost4 (ENSPKIG00000013283) tmem214 (ENSPKIG00000013296) #37 MAPRE3 (ENSPKIG00000013345) #36 dpysl5a (ENSPKIG00000013412) #35 DNMT3A (ENSPKIG00000013521) #17 ENSPKIG00000013776 ENSPKIG00000013792 dtnbb (ENSPKIG00000013896) #18 ASXL2 (ENSPKIG00000014149) #19 KIF3C (ENSPKIG00000014189) #21 ENSPKIG00000014226 ENSPKIG00000014241 #22 GAREM2 (ENSPKIG00000014263) #23 hadhaa (ENSPKIG00000014316) #24 hadhb (ENSPKIG00000014396) #25 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 4 ENSGT00940000163723.B ENSGT00950000183204.b.b.b.a ENSGT00390000012924.a ENSGT00940000158133 ENSGT00940000154481.a.b.a ENSGT01030000234944.B ENSGT00940000176900 ENSGT00940000155913.c ENSGT00940000156674 ENSGT00940000156248.oc.a ENSGT00940000156509 ENSGT00940000155086.A.g ##29 ENSGT00490000043329.a.b.g.a.i #36 ENSGT00940000155459.x.b #17 ENSGT00940000153897.b.a.a.b ##18 ENSGT00940000156975.d.a #22 ENSGT00940000154677.b.a #24 ENSGT00940000156484.b.c ENSGT00390000017528 ENSGT00940000162504 ENSGT01090000260082.d.b.a ENSGT00940000158248.a ##32 ENSGT00940000159665 ENSGT00950000183093.C.h ENSGT00940000161139 ENSGT00940000167312 ENSGT00940000174492 ENSGT00940000160421 ENSGT00390000007341.b ENSGT00950000182863.B.b ENSGT00940000158104 Asian bonytongue MODERN SPECIES 6 fhl5 (ENSSFOG00015013696) manea (ENSSFOG00015013714) BACH2 (ENSSFOG00015026786) gja10a (ENSSFOG00015031485) ANKRD6 (ENSSFOG00015013830) rragd (ENSSFOG00015013913) gabrr2a (ENSSFOG00015013943) GABRR1 (ENSSFOG00015013972) CNR1 (ENSSFOG00015013994) akirin2 (ENSSFOG00015014031) orc3 (ENSSFOG00015014381) OTOF (ENSSFOG00015014727) ##29 MAPRE3 (ENSSFOG00015014816) #36 dnmt3ab (ENSSFOG00015014853) #17 ENSSFOG00015014919 ##18 rab10 (ENSSFOG00015014932) #22 hadhab (ENSSFOG00015014954) #24 ENSSFOG00015031571 ENSSFOG00015030842 pacc1 (ENSSFOG00015015014) nenf (ENSSFOG00015028126) tagapa (ENSSFOG00015015035) ezra (ENSSFOG00015015054) ENSSFOG00015015092 ##32 ENSSFOG00015015141 ENSSFOG00015029683 HHIPL2 (ENSSFOG00015015157) ENSSFOG00015029731 ENSSFOG00015026453 ENSSFOG00015030624 ENSSFOG00015015203 P. kingsleyae MODERN SPECIES 34 ENSPKIG00000018135 stx11a (ENSPKIG00000018148) zbtb2a (ENSPKIG00000018172) esr1 (ENSPKIG00000018298) ENSPKIG00000018556 ENSPKIG00000018656 ENSPKIG00000018696 ENSPKIG00000018887 TULP4 (ENSPKIG00000019154) slc18b1 (ENSPKIG00000019233) myb (ENSPKIG00000019287) ahi1 (ENSPKIG00000019324) OTOF (ENSPKIG00000019389) ##29 mapre3a (ENSPKIG00000019457) #36 dnmt3ab (ENSPKIG00000019638) #17 RAB10 (ENSPKIG00000019774) #22 hadhab (ENSPKIG00000019822) #24 pacc1 (ENSPKIG00000019895) nenf (ENSPKIG00000019926) tagapa (ENSPKIG00000019949) ezra (ENSPKIG00000020002) SYNCRIP (ENSPKIG00000020066) SNX14 (ENSPKIG00000020125) HTR1B (ENSPKIG00000020198) ENSPKIG00000020228 myo6b (ENSPKIG00000020283) colec11 (ENSPKIG00000020364) ENSPKIG00000020407 ENSPKIG00000020425 sox11a (ENSPKIG00000020439) CMPK2 (ENSPKIG00000020457) Osteoglossiformes ANCESTRAL SPECIES 96 ENSGT00940000153897.a ##18 ENSGT00490000043329.a.a.b ##36 ENSGT00950000183117.b #27 ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.a.j #36 ENSGT01030000234527.A.a.a.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.a.b #18 ENSGT00520000055578.a.b #19 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975.d.b #22 ENSGT00940000177261 ENSGT00940000156975.c #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.b.b #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00900000143764 ENSGT00950000182848.c.b.b.b ENSGT00390000016613.d ENSGT00950000182844.b.a ENSGT00390000002089.a.a.a ENSGT00940000156484.b.d ENSGT01030000235236 ENSGT00940000156989 ENSGT00950000182836.b.a.b Asian bonytongue MODERN SPECIES tgfb2 (ENSSFOG00015005654) ADCY3 (ENSSFOG00015005680) #13 wdr26b (ENSSFOG00015005730) fez2b (ENSSFOG00015005747) selenoi (ENSSFOG00015005791) #27 ost4 (ENSSFOG00015005884) agbl5 (ENSSFOG00015005857) tmem214 (ENSSFOG00015005891) #37 mapre3a (ENSSFOG00015005918) #36 dpysl5a (ENSSFOG00015005937) #35 DNMT3A (ENSSFOG00015006003) #17 dtnbb (ENSSFOG00015006252) #18 hspb9l (ENSSFOG00015006397) ASXL2 (ENSSFOG00015006380) #19 KIF3C (ENSSFOG00015006428) #21 rab10 (ENSSFOG00015027492) #22 GAREM2 (ENSSFOG00015006462) #23 hadhaa (ENSSFOG00015006508) #24 hadhb (ENSSFOG00015006603) #25 tfap2d (ENSSFOG00015006620) ENSSFOG00015027405 tfap2b (ENSSFOG00015006654) ENSSFOG00015006673 rhag (ENSSFOG00015006691) rd3 (ENSSFOG00015027647) slc30a1a (ENSSFOG00015027996) ENSSFOG00015006757 nek2 (ENSSFOG00015006772) ENSSFOG00015027071 lpgat1 (ENSSFOG00015027445) ints7 (ENSSFOG00015006821) Clupeocephala ANCESTRAL SPECIES 140 ENSGT01040000240523 ENSGT00950000183107.a.a ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b #27 ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.b.b #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b Otomorpha DUPLICATION Otomorpha DUPLICATION Otomorpha ANCESTRAL SPECIES 165 ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975.e.a #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.b.b #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b ENSGT00530000063426.b.b ENSGT00940000154798.a.d.b ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000155936.a.b ##8 ENSGT00530000064185 #7 Clupeiformes ANCESTRAL SPECIES 235 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975.e.a #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.b.b #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b ENSGT00530000063426.b.b ENSGT00940000154798.a.d.b ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00940000178209 ENSGT00390000009415 ENSGT00940000155936.a.b ##8 ENSGT00940000171406 Denticle herring DUPLICATION Denticle herring MODERN SPECIES 308 KIF3C (ENSDCDG00000030695) #21 rab10 (ENSDCDG00000030692) #22 GAREM2 (ENSDCDG00000030691) #23 hadhaa (ENSDCDG00000030490) #24 hadhb (ENSDCDG00000029680) #25 tfap2d (ENSDCDG00000029659) tfap2b (ENSDCDG00000029651) Denticle herring MODERN SPECIES 5 ENSDCDG00000016431 si:ch73-21k16.4 (ENSDCDG00000016426) LPIN1 (ENSDCDG00000016421) GNPAT (ENSDCDG00000016416) itsn2a (ENSDCDG00000016359) ##8 mrpl19 (ENSDCDG00000016333) ENSDCDG00000016329 efhc1 (ENSDCDG00000016326) tram2 (ENSDCDG00000016300) tmem214 (ENSDCDG00000014867) #37 mapre3b (ENSDCDG00000014825) #36 dpysl5b (ENSDCDG00000014792) #35 dnmt3aa (ENSDCDG00000009632) #17 dtnba (ENSDCDG00000005514) ##18 KIF3C (ENSDCDG00000005497) #21 rab10 (ENSDCDG00000005493) #22 GAREM2 (ENSDCDG00000005491) #23 hadhaa (ENSDCDG00000005346) #24 hadhb (ENSDCDG00000004689) #25 tfap2d (ENSDCDG00000004624) ENSDCDG00000004622 tfap2b (ENSDCDG00000004613) acadl (ENSDCDG00000004606) acadl (ENSDCDG00000004602) ENSDCDG00000004598 lin28b (ENSDCDG00000004581) prep (ENSDCDG00000004295) ENSDCDG00000004222 xkr5a (ENSDCDG00000004215) saysd1 (ENSDCDG00000004214) ypel5 (ENSDCDG00000004213) Atlantic herring MODERN SPECIES 6 ENSCHAG00000022419 ENSCHAG00000022426 AK9 (ENSCHAG00000022439) FIG4 (ENSCHAG00000022495) GPR6 (ENSCHAG00000022643) WASF1 (ENSCHAG00000022646) ENSCHAG00000022652 cdc40 (ENSCHAG00000022664) METTL24 (ENSCHAG00000022690) mapre3b (ENSCHAG00000022700) #36 dpysl5b (ENSCHAG00000022720) #35 dnmt3aa (ENSCHAG00000022822) #17 dtnba (ENSCHAG00000023843) ##18 KIF3C (ENSCHAG00000023912) #21 ENSCHAG00000023917 rab10 (ENSCHAG00000023924) #22 GAREM2 (ENSCHAG00000023933) #23 hadhaa (ENSCHAG00000023963) #24 hadhb (ENSCHAG00000024547) #25 tfap2d (ENSCHAG00000025039) tfap2b (ENSCHAG00000025062) lin28b (ENSCHAG00000025081) prep (ENSCHAG00000025117) ENSCHAG00000025209 xkr5a (ENSCHAG00000025213) tram2 (ENSCHAG00000025217) efhc1 (ENSCHAG00000025291) ENSCHAG00000025313 ENSCHAG00000025325 ENSCHAG00000025330 mrpl19 (ENSCHAG00000025333) Otophysi ANCESTRAL SPECIES 55 ENSGT00940000159276 ENSGT00940000164930.b ENSGT00940000155693.a.a ENSGT00940000159745 ENSGT00940000156549.a.b ##13 ENSGT00940000153634.b.b ENSGT00390000017627.a.a.a ENSGT00940000165654 ENSGT00940000153433.B.a.a ENSGT00410000025698.a ENSGT00940000157219.e ENSGT00520000055570.B.l ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975.e.a #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.b.b #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b ENSGT00980000202516 ENSGT00530000063426.b.b ENSGT00940000154798.a.d.b ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00390000009415 ENSGT00940000155936.a.b ##8 ENSGT00940000164632.b.b.a ENSGT00940000171406 Characiphysae ANCESTRAL SPECIES 167 ENSGT00940000153433.B.a.a ENSGT00410000025698.a ENSGT00940000157219.e ENSGT00520000055570.B.l ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975.e.a #22 ENSGT00940000177261 ENSGT00940000156975.f #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.b.b #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b ENSGT00980000202516 ENSGT00530000063426.b.b ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415.b ENSGT00390000009415.a.a Channel catfish MODERN SPECIES 11 ENSIPUG00000014266 akap7 (ENSIPUG00000014244) med23 (ENSIPUG00000014075) il20ra (ENSIPUG00000014047) cfap206 (ENSIPUG00000014020) ENSIPUG00000014006 ENSIPUG00000013997 ENSIPUG00000013989 ENSIPUG00000013982 ENSIPUG00000013966 ENSIPUG00000013911 ENSIPUG00000013899 ENSIPUG00000013879 ENSIPUG00000013856 KIF3C (ENSIPUG00000013843) #21 RAB10 (ENSIPUG00000013780) #22 GAREM2 (ENSIPUG00000013762) #23 hadha (ENSIPUG00000013705) #24 HADHB (ENSIPUG00000013604) #25 tfap2d (ENSIPUG00000013571) tfap2b (ENSIPUG00000013550) ENSIPUG00000013539 lin28b (ENSIPUG00000013520) prep (ENSIPUG00000013489) xkr5 (ENSIPUG00000013477) tram2 (ENSIPUG00000013446) efhc1 (ENSIPUG00000013427) ENSIPUG00000013406 mrpl19 (ENSIPUG00000013395) ENSIPUG00000013382 ##8 ENSIPUG00000013369 Characiphysae_b ANCESTRAL SPECIES 175 ENSGT00940000153433.B.a.a ENSGT00410000025698.a ENSGT00940000157219.e ENSGT00520000055570.B.l ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975.e.a #22 ENSGT00940000177261 ENSGT00940000156975.f #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.b.b #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b ENSGT00530000063426.b.b ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415.b ENSGT00940000155936.a.b ##8 ENSGT00940000164632.b.b.a Characoidei ANCESTRAL SPECIES 206 ENSGT00940000153433.B.a.a ENSGT00410000025698.a ENSGT00940000157219.e ENSGT00520000055570.B.l ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975.e.a #22 ENSGT00940000177261 ENSGT00940000156975.f #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.b.b #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b ENSGT00530000063426.b.b ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415.b ENSGT00940000155936.a.b ##8 ENSGT00940000164632.b.b.a Red-bellied piranha MODERN SPECIES 237 ENSPNAG00000012500 si:ch73-21k16.4 (ENSPNAG00000002288) esrrgb (ENSPNAG00000002297) fam228a (ENSPNAG00000002303) #7 ENSPNAG00000012591 KIF3C (ENSPNAG00000002327) #21 rab10 (ENSPNAG00000004858) #22 GAREM2 (ENSPNAG00000002533) #23 hadhaa (ENSPNAG00000004902) #24 hadhb (ENSPNAG00000002582) #25 tfap2d (ENSPNAG00000013179) tfap2b (ENSPNAG00000013199) lin28b (ENSPNAG00000002632) prep (ENSPNAG00000013256) xkr5a (ENSPNAG00000002666) tram2 (ENSPNAG00000013362) efhc1 (ENSPNAG00000002720) ENSPNAG00000013385 mrpl19 (ENSPNAG00000002735) ENSPNAG00000002744 ##8 ENSPNAG00000002765 ENSPNAG00000002827 Cyprinoidei ANCESTRAL SPECIES 100 ENSGT00940000159276 ENSGT00940000164930.b ENSGT00940000155693.a.a ENSGT00940000159745 ENSGT00940000156549.a.b ##13 ENSGT00940000153634.b.b ENSGT00390000017627.a.a.a ENSGT00940000165654 ENSGT00940000153433.B.a.a ENSGT00410000025698.a ENSGT00940000157219.e ENSGT00520000055570.B.l ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975.e.a #22 ENSGT00940000153295.b ENSGT00980000202516 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT00530000063426.b.b ENSGT00940000154798.a.d.b ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00530000063347.A.b ENSGT01100000263662 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 198 ENSGT00550000074954.d ENSGT00940000159276.k ENSGT00940000164930.b ENSGT00940000155693.a.a.a ENSGT00940000159745.b.b ENSGT00940000156549.a.b.a ##13 ENSGT00940000153634.b.b.c ENSGT00390000017627.a.a.a.a ENSGT00940000153433.B.a.a.b ENSGT00410000025698.a.e ENSGT00940000157219.e.k ENSGT00520000055570.B.l.c ENSGT00940000155459.x.a.d #17 ENSGT00940000153897.b.b.e ##18 ENSGT00940000153739.a.b.s.d #21 ENSGT00940000156975.e.a.c #22 ENSGT00940000153295.b.k ENSGT00980000202516 ENSGT00950000182848.c.b.b.b.d ENSGT00950000182848.d.a Goldfish DUPLICATION Goldfish MODERN SPECIES 12 eif2b2 (ENSCARG00000004220) tmed10 (ENSCARG00000004358) fosab (ENSCARG00000004417) jdp2b (ENSCARG00000004431) batf (ENSCARG00000004443) ENSCARG00000004465 ##13 wdr26b (ENSCARG00000004633) fez2b (ENSCARG00000004904) esrrgb (ENSCARG00000004925) si:ch73-21k16.4 (ENSCARG00000004938) ENSCARG00000004961 GNPAT (ENSCARG00000004999) dnmt3aa (ENSCARG00000005107) #17 dtnba (ENSCARG00000006540) ##18 KIF3C (ENSCARG00000006701) #21 rab10 (ENSCARG00000006707) #22 lin28b (ENSCARG00000006722) tfap2b (ENSCARG00000006748) ENSCARG00000006804 tfap2d (ENSCARG00000006815) hadhb (ENSCARG00000006895) #25 GAREM2 (ENSCARG00000009137) #23 prep (ENSCARG00000009153) mgst3a (ENSCARG00000009226) ENSCARG00000009235 IPO13 (ENSCARG00000009286) TRIB2 (ENSCARG00000010125) unc93a (ENSCARG00000010132) ENSCARG00000010140 plg (ENSCARG00000010197) MAN1A1 (ENSCARG00000011789) Goldfish MODERN SPECIES 1754 dtnba (ENSCARG00000051093) ##18 KIF3C (ENSCARG00000050930) #21 rab10 (ENSCARG00000050919) #22 Cyprininae_a ANCESTRAL SPECIES 130 ENSGT00550000074954.d ENSGT00940000159276.k ENSGT00940000164930.b.a ENSGT00940000155693.a.a.a ENSGT00940000159745.b.b ENSGT00940000156549.a.b.a ##13 ENSGT00940000153634.b.b.c ENSGT00390000017627.a.a.a.a ENSGT00940000153433.B.a.a.b ENSGT00410000025698.a.e ENSGT00940000157219.e.k ENSGT00520000055570.B.l.c ENSGT00940000155459.x.a.d #17 ENSGT00940000153897.b.b.e ##18 ENSGT00940000153739.a.b.s.d #21 ENSGT00940000156975.e.a.c #22 ENSGT00940000153295.b.k ENSGT00950000182848.c.b.b.b.d ENSGT00950000182848.d.a ENSGT01030000234626.A.b.c #25 ENSGT00940000154677.b.b.d #24 ENSGT00530000063834.e.b.d #23 ENSGT00530000063426.b.b.f ENSGT00940000154798.a.d.b.b.a ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b.i ENSGT00940000154096.b.b.a.h.b.a ENSGT00940000154096.b.b.a.g ENSGT00530000063347.A.b.g.a ENSGT01100000263662.b ENSGT00740000116213 Golden-line barbel MODERN SPECIES 167 fosab (ENSSGRG00000053368) ENSSGRG00000053370 jdp2b (ENSSGRG00000053372) batf (ENSSGRG00000053373) ENSSGRG00000053384 ##13 wdr26b (ENSSGRG00000053410) fez2b (ENSSGRG00000053533) esrrgb (ENSSGRG00000053535) si:ch73-21k16.4 (ENSSGRG00000053536) ENSSGRG00000053549 GNPAT (ENSSGRG00000053661) dnmt3aa (ENSSGRG00000053690) #17 dtnba (ENSSGRG00000053980) ##18 ENSSGRG00000054487 KIF3C (ENSSGRG00000054489) #21 rab10 (ENSSGRG00000054493) #22 lin28b (ENSSGRG00000054505) tfap2b (ENSSGRG00000054508) tfap2d (ENSSGRG00000054518) hadhb (ENSSGRG00000054555) #25 hadhaa (ENSSGRG00000054647) #24 GAREM2 (ENSSGRG00000054673) #23 prep (ENSSGRG00000054676) ENSSGRG00000054719 xkr5a (ENSSGRG00000054722) efhc1 (ENSSGRG00000054756) ENSSGRG00000054758 IPO13 (ENSSGRG00000054790) ENSSGRG00000054846 mgst3a (ENSSGRG00000054849) Cyprininae ANCESTRAL SPECIES 314 ENSGT00940000155693.a.a.b ENSGT00940000159745.b.a ENSGT00940000156549.a.b.b ##13 ENSGT00940000153634.b.b.d ENSGT00390000017627.a.a.a.b ENSGT00940000153433.B.a.a.a ENSGT00410000025698.a.f ENSGT00940000157219.e.l ENSGT00520000055570.B.l.d ENSGT00940000155459.x.a.c #17 ENSGT00940000153897.b.b.f ##18 ENSGT00940000153739.a.b.s.c #21 ENSGT00940000156975.e.a.d #22 ENSGT00940000153295.b.l ENSGT00950000182848.c.b.b.b.c ENSGT00950000182848.d.b ENSGT01030000234626.A.b.d #25 ENSGT00940000154677.b.b.c #24 ENSGT00530000063834.e.b.c #23 ENSGT00530000063426.b.b.e ENSGT00940000154798.a.d.b.b.b ENSGT00510000046470.a.b.j ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a.h.b.b ENSGT00530000063347.A.b.g.b ENSGT01100000263662.a ENSGT01030000234626.A.b.c #25 ENSGT00940000154677.b.b.d #24 Goldfish DUPLICATION Goldfish MODERN SPECIES 645 jdp2b (ENSCARG00000069561) batf (ENSCARG00000024033) ENSCARG00000024124 wdr26b (ENSCARG00000024156) fez2b (ENSCARG00000024333) esrrgb (ENSCARG00000024358) si:ch73-21k16.4 (ENSCARG00000024384) ENSCARG00000024422 ENSCARG00000024497 dnmt3aa (ENSCARG00000024559) #17 dtnba (ENSCARG00000024814) ##18 KIF3C (ENSCARG00000024977) #21 rab10 (ENSCARG00000024986) #22 lin28b (ENSCARG00000025002) tfap2b (ENSCARG00000025023) tfap2d (ENSCARG00000025057) ENSCARG00000025113 hadhb (ENSCARG00000025176) #25 hadhaa (ENSCARG00000025436) #24 GAREM2 (ENSCARG00000025515) #23 prep (ENSCARG00000025628) ENSCARG00000025869 tram2 (ENSCARG00000025886) efhc1 (ENSCARG00000025950) ENSCARG00000025976 ENSCARG00000025987 Goldfish MODERN SPECIES 2473 rab10 (ENSCARG00000041814) #22 lin28b (ENSCARG00000041847) Cyprininae_a ANCESTRAL SPECIES 297 ENSGT00550000074954.c ENSGT00940000159276.l ENSGT00940000164930.b.b ENSGT00940000155693.a.a.b ENSGT00940000159745.b.a ENSGT00940000156549.a.b.b ##13 ENSGT00940000153634.b.b.d ENSGT00390000017627.a.a.a.b ENSGT00940000153433.B.a.a.a ENSGT00410000025698.a.f ENSGT00940000157219.e.l ENSGT00520000055570.B.l.d ENSGT00940000155459.x.a.c #17 ENSGT00940000153897.b.b.f ##18 ENSGT00940000153739.a.b.s.c #21 ENSGT00940000156975.e.a.d #22 ENSGT00940000153295.b.l ENSGT00950000182848.c.b.b.b.c ENSGT00950000182848.d.b ENSGT01030000234626.A.b.d #25 ENSGT00940000154677.b.b.c #24 ENSGT00530000063834.e.b.c #23 ENSGT00530000063426.b.b.e ENSGT00940000154798.a.d.b.a ENSGT00510000046470.a.b.j ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a.h.b.b ENSGT00530000063347.A.b.g.b ENSGT01100000263662.a ENSGT00390000008608 Golden-line barbel MODERN SPECIES 396 zc3h14 (ENSSGRG00000044781) eif2b2 (ENSSGRG00000044625) tmed10 (ENSSGRG00000044579) fosab (ENSSGRG00000044575) ENSSGRG00000044574 jdp2b (ENSSGRG00000044572) batf (ENSSGRG00000044571) wdr26b (ENSSGRG00000044569) fez2b (ENSSGRG00000044568) esrrgb (ENSSGRG00000044565) si:ch73-21k16.4 (ENSSGRG00000044564) ENSSGRG00000044366 dnmt3aa (ENSSGRG00000043238) #17 dtnba (ENSSGRG00000042521) ##18 KIF3C (ENSSGRG00000042512) #21 rab10 (ENSSGRG00000042507) #22 lin28b (ENSSGRG00000042506) tfap2b (ENSSGRG00000042505) tfap2d (ENSSGRG00000042501) hadhb (ENSSGRG00000042205) #25 hadhaa (ENSSGRG00000041894) #24 GAREM2 (ENSSGRG00000041875) #23 prep (ENSSGRG00000041858) ENSSGRG00000041853 ENSSGRG00000041849 Common carp reference MODERN SPECIES 34 fosab (ENSCCRG00000033799) ENSCCRG00000033798 jdp2b (ENSCCRG00000033796) ENSCCRG00000033794 ENSCCRG00000033792 ##13 wdr26b (ENSCCRG00000013666) fez2b (ENSCCRG00000045991) esrrgb (ENSCCRG00000053761) si:ch73-21k16.4 (ENSCCRG00000012895) ENSCCRG00000012939 ENSCCRG00000013654 dnmt3aa (ENSCCRG00000058953) #17 dtnba (ENSCCRG00000058037) ##18 ENSCCRG00000079344 #21 lin28b (ENSCCRG00000043756) rab10 (ENSCCRG00000043765) #22 tfap2b (ENSCCRG00000003128) tfap2d (ENSCCRG00000003096) hadhb (ENSCCRG00000055821) #25 hadhaa (ENSCCRG00000010021) #24 GAREM2 (ENSCCRG00000010023) #23 ENSCCRG00000023759 prep (ENSCCRG00000010038) xkr5a (ENSCCRG00000010765) tram2 (ENSCCRG00000004112) ENSCCRG00000076012 ENSCCRG00000028238 ENSCCRG00000077241 ENSCCRG00000034744 PAX1 (ENSCCRG00000034722) nkx2.2b (ENSCCRG00000012145) Zebrafish MODERN SPECIES 12 wdr26b (ENSDARG00000006812) ENSDARG00000093354 fez2b (ENSDARG00000022260) ENSDARG00000041375 esrrgb (ENSDARG00000011696) GPATCH2 (ENSDARG00000101260) ENSDARG00000103380 GNPAT (ENSDARG00000078770) dnmt3aa (ENSDARG00000005394) #17 ENSDARG00000089158 ENSDARG00000096715 ENSDARG00000091243 ENSDARG00000096708 dtnba (ENSDARG00000077694) ##18 KIF3C (ENSDARG00000017162) #21 rab10 (ENSDARG00000046106) #22 lin28b (ENSDARG00000052511) ENSDARG00000116759 tfap2b (ENSDARG00000012667) tfap2d (ENSDARG00000023272) hadhb (ENSDARG00000102055) #25 hadhaa (ENSDARG00000057128) #24 GAREM2 (ENSDARG00000073933) #23 prep (ENSDARG00000057151) efhc1 (ENSDARG00000009743) xkr5a (ENSDARG00000103017) tram2 (ENSDARG00000030092) ENSDARG00000067927 IPO13 (ENSDARG00000060618) ENSDARG00000099804 ENSDARG00000100162 Otomorpha ANCESTRAL SPECIES 272 ENSGT00940000156793 ENSGT00940000157459.b ENSGT00940000164671 ENSGT00940000158683.a.a.a.a ENSGT01030000234573.B.c.a ENSGT00390000010899.a.a ENSGT00940000155076.a.d ENSGT00940000159456 ENSGT00730000111119 ENSGT00940000159896 ENSGT00940000161610 ENSGT00940000161107 ENSGT00510000047831 ENSGT00940000156886.D ENSGT00970000197437 ENSGT00940000156975.e.b #22 ENSGT00940000154677.b.a #24 ENSGT00940000156484.b.e.a ENSGT00940000153739.a.b.t #21 ENSGT00520000055578.a.b #19 ENSGT00940000153897.b.a.b #18 ENSGT00940000155459.x.b #17 ENSGT01030000234527.A.a.a.b.a #35 ENSGT00490000043329.a.b.g.a #36 ENSGT00940000155086.A ##29 Clupeiformes ANCESTRAL SPECIES 209 ENSGT00940000165020.b ENSGT00390000016216 ENSGT00940000157459.b ENSGT00940000164671 ENSGT00940000158683.a.a.a.a ENSGT01030000234573.B.c.a ENSGT00390000010899.a.a ENSGT00940000155076.a.d ENSGT00940000159456 ENSGT00730000111119 ENSGT00940000159896 ENSGT00940000161610 ENSGT00940000161107 ENSGT00510000047831 ENSGT00940000156886.D ENSGT00940000156975.e.b #22 ENSGT00940000154677.b.a #24 ENSGT00940000158613.l ENSGT00390000005318.b.b.b.a ENSGT00940000154641.B.b ENSGT01100000263652 ENSGT00940000154748.B ENSGT00390000003245 ENSGT00940000154641.B.a.f ENSGT00940000155718.a ENSGT00390000018895.b ENSGT00500000044870.b ENSGT00940000164359.a ENSGT00940000165828 Atlantic herring MODERN SPECIES 5 ENSCHAG00000011322 ENSCHAG00000011265 ENSCHAG00000011230 ENSCHAG00000011213 CRIP2 (ENSCHAG00000011166) MTA1 (ENSCHAG00000010641) tmem229b (ENSCHAG00000010616) ENSCHAG00000010605 plekhh1 (ENSCHAG00000007959) slc25a21 (ENSCHAG00000007783) pax9 (ENSCHAG00000007718) NKX2-8 (ENSCHAG00000007696) nkx2.1 (ENSCHAG00000007682) mbip (ENSCHAG00000007662) RPS6KA5 (ENSCHAG00000003882) ENSCHAG00000003723 #22 hadhab (ENSCHAG00000001370) #24 mycla (ENSCHAG00000000929) mfsd2aa (ENSCHAG00000000816) ENSCHAG00000000705 ENSCHAG00000000650 ENSCHAG00000000552 ENSCHAG00000000527 ENSCHAG00000000484 ENSCHAG00000000464 ENSCHAG00000000431 ENSCHAG00000000394 mfsd2aa (ENSCHAG00000018004) mycla (ENSCHAG00000017973) zbtb8os (ENSCHAG00000017956) ENSCHAG00000017902 Denticle herring MODERN SPECIES EML5 (ENSDCDG00000002452) ITPK1 (ENSDCDG00000002442) plk4 (ENSDCDG00000002265) HSPA4L (ENSDCDG00000002180) chmp3 (ENSDCDG00000002141) ENSDCDG00000002137 mrpl35 (ENSDCDG00000002132) plekhh1 (ENSDCDG00000002100) ENSDCDG00000002089 slc25a21 (ENSDCDG00000002063) pax9 (ENSDCDG00000002056) ENSDCDG00000002051 nkx2.1 (ENSDCDG00000002047) mbip (ENSDCDG00000002040) RPS6KA5 (ENSDCDG00000001484) ENSDCDG00000001404 #22 hadhab (ENSDCDG00000000974) #24 mycla (ENSDCDG00000000896) mfsd2aa (ENSDCDG00000000834) zgc:153911 (ENSDCDG00000000814) ENSDCDG00000000808 ENSDCDG00000000806 ENSDCDG00000000776 zbtb8os (ENSDCDG00000000760) ENSDCDG00000000758 khdrbs1a (ENSDCDG00000000734) tmem39b (ENSDCDG00000000729) ccdc28b (ENSDCDG00000000727) hs1bp3 (ENSDCDG00000000725) ENSDCDG00000000724 ENSDCDG00000000722 Otophysi ANCESTRAL SPECIES 54 ENSGT00940000156886.D ENSGT00510000047831 ENSGT00940000161107 ENSGT00940000161610 ENSGT00940000159896 ENSGT00730000111119 ENSGT00940000159456 ENSGT00940000155076.a.d ENSGT00390000010899.a.a ENSGT01030000234573.B.c.a ENSGT00940000158683.a.a.a.a ENSGT00940000164671 ENSGT00940000157459.b ENSGT00940000156793 ENSGT00390000016216 ENSGT00940000156975.e.b #22 ENSGT00940000154677.b.a #24 ENSGT00940000156484.b.e.a.a ENSGT00940000178910 ENSGT00940000153739.a.b.t #21 ENSGT00520000055578.a.b #19 ENSGT00940000153897.b.a.b #18 ENSGT00940000155459.x.b #17 ENSGT01030000234527.A.a.a.b.a #35 ENSGT00490000043329.a.b.g.a #36 ENSGT00940000155724.q ENSGT00940000156078.c ENSGT00530000063503.a.b.g.b ENSGT01010000222287.B.b.a.b.b.b ENSGT00940000159468 ENSGT00940000164359.b Characiphysae ANCESTRAL SPECIES 4 ENSGT00940000156886.D ENSGT00510000047831 ENSGT00940000161107 ENSGT00940000161610 ENSGT00940000159896 ENSGT00730000111119 ENSGT00940000159456 ENSGT00940000155076.a.d ENSGT00390000010899.a.a ENSGT01030000234573.B.c.a ENSGT00940000158683.a.a.a.a ENSGT00940000164671 ENSGT00940000157459.b ENSGT00940000156793 ENSGT00390000016216 ENSGT00940000156975.e.b #22 ENSGT00940000154677.b.a #24 ENSGT01080000259636 ENSGT00940000156484.b.e.a.a ENSGT00940000178910 ENSGT00940000153739.a.b.t #21 ENSGT00520000055578.a.b #19 ENSGT00940000153897.b.a.b #18 ENSGT00940000155459.x.b #17 ENSGT01030000234527.A.a.a.b.a #35 ENSGT00490000043329.a.b.g.a #36 ENSGT00940000155724.q ENSGT00940000156078.c ENSGT00530000063503.a.b.g.b ENSGT00940000154484.B.a.b ENSGT01010000222287.B.b.a.b.b.b Channel catfish MODERN SPECIES 28 RPS6KA5 (ENSIPUG00000023714) mbip (ENSIPUG00000023711) nkx2-1 (ENSIPUG00000023704) nkx2-8 (ENSIPUG00000023703) pax9 (ENSIPUG00000023700) SLC25A21 (ENSIPUG00000023687) plekhh1 (ENSIPUG00000023683) ZFP36L1 (ENSIPUG00000023681) tmem229b (ENSIPUG00000023676) mta1 (ENSIPUG00000023660) crip2 (ENSIPUG00000023653) crip1 (ENSIPUG00000023649) elmsan1 (ENSIPUG00000023646) ptgr2 (ENSIPUG00000023638) tmem62 (ENSIPUG00000023636) ENSIPUG00000023629 #22 hadhab (ENSIPUG00000023622) #24 ENSIPUG00000023621 slc30a1b (ENSIPUG00000023619) kif3cb (ENSIPUG00000023614) #21 asxl2 (ENSIPUG00000023610) #19 dtnb (ENSIPUG00000023593) #18 dnmt3ab (ENSIPUG00000023584) #17 dpysl5 (ENSIPUG00000023577) #35 mapre3a (ENSIPUG00000023574) #36 ENSIPUG00000023566 myo6b (ENSIPUG00000023558) HTR1B (ENSIPUG00000023556) colec11 (ENSIPUG00000023552) sox11 (ENSIPUG00000023551) cmpk2 (ENSIPUG00000023548) Characiphysae_b ANCESTRAL SPECIES 20 ENSGT00940000156886.D ENSGT00510000047831 ENSGT00940000161107 ENSGT00940000161610 ENSGT00940000159896 ENSGT00730000111119 ENSGT00940000159456 ENSGT00940000155076.a.d ENSGT00390000010899.a.a ENSGT01030000234573.B.c.a ENSGT00940000158683.a.a.a.a ENSGT00940000164671 ENSGT00940000157459.b ENSGT00940000156793 ENSGT00390000016216 ENSGT00940000156975.e.b #22 ENSGT00940000154677.b.a #24 ENSGT01080000259636 ENSGT00940000156484.b.e.a.a ENSGT00940000178910 ENSGT00940000153739.a.b.t #21 ENSGT00520000055578.a.b #19 ENSGT00940000153897.b.a.b #18 ENSGT00940000155459.x.b #17 ENSGT01030000234527.A.a.a.b.a #35 ENSGT00490000043329.a.b.g.a #36 ENSGT00940000155724.q ENSGT00940000156078.c ENSGT00530000063503.a.b.g.b ENSGT00940000154484.B.a.b ENSGT01010000222287.B.b.a.b.b.b Electric eel MODERN SPECIES 625 plekhh1 (ENSEEEG00000006666) zfp36l1a (ENSEEEG00000006665) tmem229b (ENSEEEG00000006664) MTA1 (ENSEEEG00000005576) crip2 (ENSEEEG00000005488) crip1 (ENSEEEG00000005480) MIDEAS (ENSEEEG00000005476) ptgr2 (ENSEEEG00000005463) TMEM62 (ENSEEEG00000005455) ENSEEEG00000005448 #22 Characoidei ANCESTRAL SPECIES 32 ENSGT00940000156886.D ENSGT00510000047831 ENSGT00940000161107 ENSGT00940000182318 ENSGT00940000159896 ENSGT00730000111119 ENSGT00940000159456 ENSGT00940000155076.a.d ENSGT00390000010899.a.a ENSGT01030000234573.B.c.a ENSGT00940000158683.a.a.a.a ENSGT00940000164671 ENSGT00940000157459.b ENSGT00940000156793 ENSGT00390000016216 ENSGT00940000156975.e.b #22 ENSGT00940000154677.b.a #24 ENSGT01080000259636 ENSGT00940000156484.b.e.a.a ENSGT00940000178910 ENSGT00940000153739.a.b.t #21 ENSGT00520000055578.a.b #19 ENSGT00940000153897.b.a.b #18 ENSGT00940000155459.x.b #17 ENSGT01030000234527.A.a.a.b.a #35 ENSGT00490000043329.a.b.g.a #36 ENSGT00940000155724.q ENSGT00940000156078.c ENSGT00530000063503.a.b.g.b ENSGT00940000154484.B.a.b ENSGT00940000159468 Mexicana tetra MODERN SPECIES 24 RPS6KA5 (ENSAMXG00000002148) mbip (ENSAMXG00000002154) nkx2.1 (ENSAMXG00000002155) ENSAMXG00000002158 pax9 (ENSAMXG00000031250) slc25a21 (ENSAMXG00000039088) plekhh1 (ENSAMXG00000002175) zfp36l1a (ENSAMXG00000036093) tmem229b (ENSAMXG00000041935) MTA1 (ENSAMXG00000002214) crip2 (ENSAMXG00000032936) crip1 (ENSAMXG00000033153) ENSAMXG00000016770 ptgr2 (ENSAMXG00000016801) TMEM62 (ENSAMXG00000016834) ENSAMXG00000033253 #22 hadhab (ENSAMXG00000016894) #24 slc30a1b (ENSAMXG00000033624) ENSAMXG00000038010 kif3cb (ENSAMXG00000016963) #21 ASXL2 (ENSAMXG00000040278) #19 dtnbb (ENSAMXG00000039786) #18 ENSAMXG00000034971 dnmt3ab (ENSAMXG00000030597) #17 dpysl5a (ENSAMXG00000017057) #35 mapre3a (ENSAMXG00000035032) #36 ENSAMXG00000031248 myo6b (ENSAMXG00000017107) ENSAMXG00000038125 ENSAMXG00000035833 htr1b (ENSAMXG00000025153) Red-bellied piranha MODERN SPECIES 33 mbip (ENSPNAG00000015523) nkx2.1 (ENSPNAG00000005935) nkx2.9 (ENSPNAG00000015548) pax9 (ENSPNAG00000015572) slc25a21 (ENSPNAG00000015603) plekhh1 (ENSPNAG00000015669) ENSPNAG00000015709 zfp36l1a (ENSPNAG00000015712) tmem229b (ENSPNAG00000015730) MTA1 (ENSPNAG00000015822) crip2 (ENSPNAG00000015866) crip1 (ENSPNAG00000015879) ENSPNAG00000015910 ptgr2 (ENSPNAG00000015939) TMEM62 (ENSPNAG00000015959) ENSPNAG00000015996 #22 hadhab (ENSPNAG00000016106) #24 ENSPNAG00000016125 slc30a1b (ENSPNAG00000016132) kif3cb (ENSPNAG00000016169) #21 ASXL2 (ENSPNAG00000016179) #19 dtnbb (ENSPNAG00000016352) #18 dnmt3ab (ENSPNAG00000016534) #17 dpysl5a (ENSPNAG00000016614) #35 mapre3a (ENSPNAG00000016644) #36 ENSPNAG00000016660 myo6b (ENSPNAG00000016938) ENSPNAG00000016997 htr1b (ENSPNAG00000017017) colec11 (ENSPNAG00000017024) ENSPNAG00000017107 Otomorpha ANCESTRAL SPECIES ENSGT00940000156975.f #22 Otophysi ANCESTRAL SPECIES ENSGT00940000156975.f #22 Characiphysae ANCESTRAL SPECIES 167 ENSGT00940000153433.B.a.a ENSGT00410000025698.a ENSGT00940000157219.e ENSGT00520000055570.B.l ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975.e.a #22 ENSGT00940000177261 ENSGT00940000156975.f #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.b.b #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b ENSGT00980000202516 ENSGT00530000063426.b.b ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415.b ENSGT00390000009415.a.a ENSGT00940000155936.a.b ##8 ENSGT00940000164632.b.b.a Characiphysae_b ANCESTRAL SPECIES 175 ENSGT00940000153433.B.a.a ENSGT00410000025698.a ENSGT00940000157219.e ENSGT00520000055570.B.l ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975.e.a #22 ENSGT00940000177261 ENSGT00940000156975.f #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.b.b #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b ENSGT00530000063426.b.b ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415.b ENSGT00940000155936.a.b ##8 ENSGT00940000164632.b.b.a ENSGT00940000171406 Characoidei ANCESTRAL SPECIES 206 ENSGT00940000153433.B.a.a ENSGT00410000025698.a ENSGT00940000157219.e ENSGT00520000055570.B.l ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975.e.a #22 ENSGT00940000177261 ENSGT00940000156975.f #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.b.b #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b ENSGT00530000063426.b.b ENSGT01070000253766.A.a.a.b.a.b ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000154096.b.b.a ENSGT00390000009415.b ENSGT00940000155936.a.b ##8 ENSGT00940000164632.b.b.a ENSGT00940000171406 Mexicana tetra MODERN SPECIES 18 cry-dash (ENSAMXG00000002370) myd88 (ENSAMXG00000033434) ENSAMXG00000030738 oxsr1b (ENSAMXG00000002341) slc22a13b (ENSAMXG00000002238) LIMD2 (ENSAMXG00000002170) csrnp1b (ENSAMXG00000034148) esrrgb (ENSAMXG00000001660) si:ch73-21k16.4 (ENSAMXG00000001662) LPIN1 (ENSAMXG00000032749) GNPAT (ENSAMXG00000001670) dnmt3aa (ENSAMXG00000001678) #17 dtnba (ENSAMXG00000001714) ##18 KIF3C (ENSAMXG00000035039) #21 ENSAMXG00000032714 RAB10 (ENSAMXG00000034090) #22 GAREM2 (ENSAMXG00000001775) #23 hadhaa (ENSAMXG00000001804) #24 hadhb (ENSAMXG00000001836) #25 tfap2d (ENSAMXG00000001854) tfap2b (ENSAMXG00000034876) lin28b (ENSAMXG00000001888) prep (ENSAMXG00000001896) xkr5a (ENSAMXG00000001910) tram2 (ENSAMXG00000042373) efhc1 (ENSAMXG00000001941) ENSAMXG00000041061 mrpl19 (ENSAMXG00000001955) ENSAMXG00000040080 ##8 ENSAMXG00000029292 ENSAMXG00000036485 Electric eel MODERN SPECIES 921 ENSEEEG00000002210 ##18 KIF3C (ENSEEEG00000002181) #21 ENSEEEG00000002176 RAB10 (ENSEEEG00000002174) #22 GAREM2 (ENSEEEG00000002173) #23 hadhaa (ENSEEEG00000001405) #24 hadhb (ENSEEEG00000001287) #25 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000156975.f #22 Cyprininae ANCESTRAL SPECIES ENSGT00940000156975.f #22 Goldfish MODERN SPECIES 12 lin9 (ENSCARG00000056261) mixl1 (ENSCARG00000056308) ttc32 (ENSCARG00000056612) matn3a (ENSCARG00000056619) laptm4a (ENSCARG00000056649) mark3b (ENSCARG00000056740) clic5b (ENSCARG00000057984) runx2b (ENSCARG00000058088) ENSCARG00000058114 ENSCARG00000058140 trmt6 (ENSCARG00000058163) ENSCARG00000058379 bmp2b (ENSCARG00000036539) ENSCARG00000036554 ENSCARG00000036566 RAB10 (ENSCARG00000036574) #22 lin28b (ENSCARG00000036589) GPR6 (ENSCARG00000036611) gata4 (ENSCARG00000036645) fdft1 (ENSCARG00000036696) ENSCARG00000037367 ENSCARG00000037403 ENSCARG00000037445 SLC22A23 (ENSCARG00000037457) DSP (ENSCARG00000037651) tbc1d7 (ENSCARG00000038044) ENSCARG00000038055 eef1db (ENSCARG00000038077) pycr3 (ENSCARG00000038108) gfus.2 (ENSCARG00000038129) gfus.2 (ENSCARG00000038245) Cyprininae_a ANCESTRAL SPECIES ENSGT00940000156975.f #22 Common carp reference MODERN SPECIES 28 tmed10 (ENSCCRG00000024655) ENSCCRG00000024792 fosab (ENSCCRG00000072619) jdp2b (ENSCCRG00000060927) batf (ENSCCRG00000077530) ENSCCRG00000033462 ##13 wdr26b (ENSCCRG00000045952) fez2b (ENSCCRG00000013917) esrrgb (ENSCCRG00000012875) si:ch73-21k16.4 (ENSCCRG00000080993) ENSCCRG00000012411 ENSCCRG00000012420 dnmt3aa (ENSCCRG00000012465) #17 dtnba (ENSCCRG00000074769) ##18 KIF3C (ENSCCRG00000043861) #21 RAB10 (ENSCCRG00000082614) #22 lin28b (ENSCCRG00000063422) tfap2b (ENSCCRG00000078327) tfap2d (ENSCCRG00000025627) hadhb (ENSCCRG00000010774) #25 hadhaa (ENSCCRG00000074806) #24 GAREM2 (ENSCCRG00000010843) #23 ENSCCRG00000010851 prep (ENSCCRG00000010847) tram2 (ENSCCRG00000028190) efhc1 (ENSCCRG00000028193) ENSCCRG00000065663 ENSCCRG00000008668 ENSCCRG00000041541 PAX1 (ENSCCRG00000041349) nkx2.2b (ENSCCRG00000041579) Euteleosteomorpha ANCESTRAL SPECIES 92 ENSGT01040000240523 ENSGT00950000183107.a.a ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b #27 ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.b.b #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b Acanthomorphata ANCESTRAL SPECIES 219 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00530000063834.e.b #23 ENSGT00940000154677.b.b #24 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d ENSGT00950000182848.c.b.b.b ENSGT00940000159155 ENSGT00940000165711 ENSGT00950000183032.B.b.b ENSGT00390000004803 ENSGT00940000157684 Cod MODERN SPECIES 13 chrm5b (ENSGMOG00000032574) aven (ENSGMOG00000014913) RYR3 (ENSGMOG00000014933) ENSGMOG00000028233 GREM1 (ENSGMOG00000019960) SCG5 (ENSGMOG00000001443) ENSGMOG00000001432 ENSGMOG00000035136 ENSGMOG00000001376 tmem214 (ENSGMOG00000018357) #37 ENSGMOG00000018388 #36 dpysl5b (ENSGMOG00000018400) #35 dnmt3aa (ENSGMOG00000018426) #17 dtnba (ENSGMOG00000018464) ##18 KIF3C (ENSGMOG00000028919) #21 rab10 (ENSGMOG00000018515) #22 GAREM2 (ENSGMOG00000022304) #23 ENSGMOG00000034882 hadhb (ENSGMOG00000017832) #25 tfap2d (ENSGMOG00000030903) tfap2b (ENSGMOG00000017800) ENSGMOG00000017733 lrp11 (ENSGMOG00000017710) PCMT1 (ENSGMOG00000017692) nup43 (ENSGMOG00000017672) LATS1 (ENSGMOG00000017653) ENSGMOG00000030403 ENSGMOG00000034841 CFAP206 (ENSGMOG00000012916) ENSGMOG00000024555 smim8 (ENSGMOG00000023348) Euacanthomorphacea ANCESTRAL SPECIES 13 ENSGT00390000017022 ENSGT00520000055570.B.k ENSGT00940000155321.e ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711 ENSGT00940000159155 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b ENSGT00940000154045.b Pinecone sodierfish MODERN SPECIES 16 fabp7b (ENSMMDG00005016700) ENSMMDG00005016713 ENSMMDG00005016721 ENSMMDG00005016920 scara5 (ENSMMDG00005016921) pbk (ENSMMDG00005016923) esco2 (ENSMMDG00005016925) ccdc25 (ENSMMDG00005016926) tmem214 (ENSMMDG00005016934) #37 mapre3b (ENSMMDG00005017613) #36 dpysl5b (ENSMMDG00005017618) #35 dnmt3aa (ENSMMDG00005017623) #17 dtnba (ENSMMDG00005017699) ##18 ENSMMDG00005017772 KIF3C (ENSMMDG00005017774) #21 rab10 (ENSMMDG00005017800) #22 lats1 (ENSMMDG00005017801) nup43 (ENSMMDG00005017802) pcmt (ENSMMDG00005017804) lrp11 (ENSMMDG00005017821) map3k5 (ENSMMDG00005017836) tfap2b (ENSMMDG00005017943) tfap2d (ENSMMDG00005017956) hadhb (ENSMMDG00005018017) #25 ENSMMDG00005019999 hadhaa (ENSMMDG00005020004) #24 GAREM2 (ENSMMDG00005020145) #23 atp5mj (ENSMMDG00005020147) ENSMMDG00005020148 ENSMMDG00005020149 ENSMMDG00005020151 Percomorphaceae ANCESTRAL SPECIES 14 ENSGT00940000177326 ENSGT01100000263671 ENSGT00940000163960.b ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711 ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b Tiger tail seahorse MODERN SPECIES 404 nrxn3b (ENSHCOG00000011157) TP53 (ENSHCOG00000011113) ENSHCOG00000011106 ism2b (ENSHCOG00000011074) sptlc2b (ENSHCOG00000011048) snw1 (ENSHCOG00000011007) tmem214 (ENSHCOG00000010965) #37 mapre3b (ENSHCOG00000010940) #36 dpysl5b (ENSHCOG00000010906) #35 dnmt3aa (ENSHCOG00000010776) #17 ENSHCOG00000010737 dtnba (ENSHCOG00000010711) ##18 ENSHCOG00000010657 KIF3C (ENSHCOG00000010641) #21 rab10 (ENSHCOG00000010514) #22 lats1 (ENSHCOG00000000325) nup43 (ENSHCOG00000010466) pcmt (ENSHCOG00000010431) lrp11 (ENSHCOG00000010396) map3k5 (ENSHCOG00000010382) ENSHCOG00000010312 tfap2b (ENSHCOG00000010301) tfap2d (ENSHCOG00000010271) hadhb (ENSHCOG00000010250) #25 hadhaa (ENSHCOG00000010233) #24 GAREM2 (ENSHCOG00000010186) #23 atp5mj (ENSHCOG00000010159) ENSHCOG00000010154 ENSHCOG00000010143 ENSHCOG00000010088 Percomorphaceae_B ANCESTRAL SPECIES 18 ENSGT00940000177235 ENSGT01100000263671 ENSGT00940000163960.b ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b Percomorphaceae_C ANCESTRAL SPECIES 19 ENSGT00940000177235 ENSGT01100000263671 ENSGT00940000163960.b ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B Eupercaria ANCESTRAL SPECIES 16 ENSGT00940000177326 ENSGT00940000177235 ENSGT01100000263988 ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B Tetraodontidae ANCESTRAL SPECIES 63 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT01060000248856 ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00530000063834.e.b #23 ENSGT01100000264937 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b.d Fugu MODERN SPECIES 7 MAN1A1 (ENSTRUG00000027937) FAM184A (ENSTRUG00000007214) ptrhd1 (ENSTRUG00000007201) #11 ENSTRUG00000006619 #10 unc93a (ENSTRUG00000006505) mapre3b (ENSTRUG00000005250) #36 mapre3b (ENSTRUG00000005510) #36 dpysl5b (ENSTRUG00000004660) #35 dnmt3aa (ENSTRUG00000003838) #17 dtnba (ENSTRUG00000002471) ##18 ENSTRUG00000002345 ENSTRUG00000023527 KIF3C (ENSTRUG00000001953) #21 ENSTRUG00000026009 ENSTRUG00000030265 rab10 (ENSTRUG00000001680) #22 lats1 (ENSTRUG00000001479) nup43 (ENSTRUG00000001466) pcmt (ENSTRUG00000024022) ENSTRUG00000021200 ENSTRUG00000001331 map3k5 (ENSTRUG00000001070) ENSTRUG00000031830 tfap2b (ENSTRUG00000001332) tfap2d (ENSTRUG00000000856) hadhb (ENSTRUG00000013847) #25 GAREM2 (ENSTRUG00000033254) #23 ENSTRUG00000024216 ENSTRUG00000023535 ENSTRUG00000020849 esr2a (ENSTRUG00000013709) Tetraodon MODERN SPECIES 5 ENSTNIG00000019142 #10 unc93a (ENSTNIG00000019141) AFDN (ENSTNIG00000019140) ENSTNIG00000000625 ENSTNIG00000004032 ENSTNIG00000005240 ENSTNIG00000019139 tmem214 (ENSTNIG00000019138) #37 mapre3b (ENSTNIG00000019137) #36 MAPRE3 (ENSTNIG00000019136) #36 dpysl5b (ENSTNIG00000019135) #35 dnmt3aa (ENSTNIG00000019134) #17 dtnba (ENSTNIG00000019133) ##18 ENSTNIG00000019132 KIF3C (ENSTNIG00000019131) #21 rab10 (ENSTNIG00000019130) #22 lats1 (ENSTNIG00000019129) nup43 (ENSTNIG00000019128) pcmt (ENSTNIG00000019127) lrp11 (ENSTNIG00000019126) map3k5 (ENSTNIG00000019125) hadhb (ENSTNIG00000013291) #25 GAREM2 (ENSTNIG00000013290) #23 ENSTNIG00000003063 esr2a (ENSTNIG00000003064) jag2b (ENSTNIG00000004242) reps1 (ENSTNIG00000012206) clu (ENSTNIG00000012207) SCARA3 (ENSTNIG00000012208) THBS1 (ENSTNIG00000012209) gpr176 (ENSTNIG00000012210) Eupecaria_A ANCESTRAL SPECIES 16 ENSGT00940000177326 ENSGT00940000177235 ENSGT01100000263988 ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B Ballan wrasse MODERN SPECIES 138 ENSLBEG00000017973 scara5 (ENSLBEG00000017937) pbk (ENSLBEG00000017910) esco2 (ENSLBEG00000017871) ccdc25 (ENSLBEG00000017845) tmem214 (ENSLBEG00000017793) #37 ENSLBEG00000017739 #36 dpysl5b (ENSLBEG00000017678) #35 dnmt3aa (ENSLBEG00000017607) #17 dtnba (ENSLBEG00000017416) ##18 ENSLBEG00000017322 KIF3C (ENSLBEG00000017299) #21 rab10 (ENSLBEG00000017280) #22 lats1 (ENSLBEG00000017235) nup43 (ENSLBEG00000017200) pcmt (ENSLBEG00000017170) lrp11 (ENSLBEG00000017146) map3k5 (ENSLBEG00000017084) tfap2b (ENSLBEG00000017035) tfap2d (ENSLBEG00000016981) hadhb (ENSLBEG00000016901) #25 hadhaa (ENSLBEG00000016662) #24 GAREM2 (ENSLBEG00000016558) #23 ENSLBEG00000016538 atp5mj (ENSLBEG00000016525) ENSLBEG00000016505 ENSLBEG00000016481 esr2a (ENSLBEG00000016458) Eupecaria_B ANCESTRAL SPECIES 16 ENSGT00940000177326 ENSGT00940000177235 ENSGT01100000263988 ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B Eupecaria_C ANCESTRAL SPECIES 16 ENSGT00940000177326 ENSGT00940000177235 ENSGT01100000263988 ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b ENSGT00940000154045.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 11 ENSGT00940000155321.e ENSGT00940000177326 ENSGT00940000177235.i ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00530000063834.e.b #23 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b ENSGT00940000154045.b ENSGT00410000025918 Large yellow croaker MODERN SPECIES 482 exoc8 (ENSLCRG00005002640) sprtn (ENSLCRG00005002525) FAM89A (ENSLCRG00005002521) arv1 (ENSLCRG00005022548) scara5 (ENSLCRG00005022545) pbk (ENSLCRG00005022540) esco2 (ENSLCRG00005022538) ccdc25 (ENSLCRG00005022536) tmem214 (ENSLCRG00005022518) #37 ENSLCRG00005022509 #36 dpysl5b (ENSLCRG00005022480) #35 dnmt3aa (ENSLCRG00005022244) #17 dtnba (ENSLCRG00005022039) ##18 ENSLCRG00005021978 KIF3C (ENSLCRG00005021975) #21 rab10 (ENSLCRG00005021968) #22 lats1 (ENSLCRG00005021960) nup43 (ENSLCRG00005021949) pcmt (ENSLCRG00005021933) lrp11 (ENSLCRG00005021927) map3k5 (ENSLCRG00005021692) tfap2b (ENSLCRG00005021570) tfap2d (ENSLCRG00005021555) hadhb (ENSLCRG00005021353) #25 GAREM2 (ENSLCRG00005021332) #23 ENSLCRG00005021326 ENSLCRG00005021325 esr2a (ENSLCRG00005021315) jag2b (ENSLCRG00005020318) nudt14 (ENSLCRG00005020133) ENSLCRG00005020123 European seabass MODERN SPECIES 7 parp1 (ENSDLAG00005016955) ENSDLAG00005019347 lin9 (ENSDLAG00005019351) mixl1 (ENSDLAG00005019378) acbd3 (ENSDLAG00005019380) ENSDLAG00005033327 hebp2 (ENSDLAG00005019396) ENSDLAG00005019404 tmem214 (ENSDLAG00005000178) #37 ENSDLAG00005000225 #36 dpysl5b (ENSDLAG00005000252) #35 dnmt3aa (ENSDLAG00005000339) #17 dtnba (ENSDLAG00005000781) ##18 ENSDLAG00005001039 KIF3C (ENSDLAG00005001041) #21 rab10 (ENSDLAG00005027287) #22 LATS1 (ENSDLAG00005001055) nup43 (ENSDLAG00005001065) PCMT1 (ENSDLAG00005001077) ENSDLAG00005001093 ENSDLAG00005001096 ENSDLAG00005001123 tfap2b (ENSDLAG00005001349) tfap2d (ENSDLAG00005034048) hadhb (ENSDLAG00005001480) #25 ENSDLAG00005001693 #23 ENSDLAG00005030584 ENSDLAG00005001702 esr2a (ENSDLAG00005001770) jag2b (ENSDLAG00005002137) nudt14 (ENSDLAG00005005352) Gilthead seabream MODERN SPECIES 14 ENSSAUG00010012242 ENSSAUG00010012244 ENSSAUG00010012246 ENSSAUG00010012248 ENSSAUG00010012249 ENSSAUG00010012250 ENSSAUG00010012253 tmem214 (ENSSAUG00010002876) #37 mapre3b (ENSSAUG00010003357) #36 ENSSAUG00010003358 dpysl5b (ENSSAUG00010003360) #35 dnmt3aa (ENSSAUG00010003393) #17 dtnba (ENSSAUG00010008826) ##18 ENSSAUG00010010271 KIF3C (ENSSAUG00010010278) #21 rab10 (ENSSAUG00010010294) #22 lats1 (ENSSAUG00010010298) pcmt (ENSSAUG00010010301) lrp11 (ENSSAUG00010010307) map3k5 (ENSSAUG00010010318) tfap2b (ENSSAUG00010010916) tfap2d (ENSSAUG00010010926) hadhb (ENSSAUG00010010935) #25 GAREM2 (ENSSAUG00010012062) #23 atp5mj (ENSSAUG00010012064) ENSSAUG00010012070 esr2a (ENSSAUG00010012071) jag2b (ENSSAUG00010012094) nudt14 (ENSSAUG00010013037) ENSSAUG00010013041 knstrn (ENSSAUG00010013050) Perciformes ANCESTRAL SPECIES 14 ENSGT00390000017022 ENSGT00520000055570.B.k ENSGT00940000155321.e ENSGT00940000163960.b ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b Perciformes_a ANCESTRAL SPECIES 15 ENSGT00390000017022 ENSGT00520000055570.B.k ENSGT00940000155321.e ENSGT01080000257477.B ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b Pike perch MODERN SPECIES 4 jag2b (ENSSLUG00000000947) esr2a (ENSSLUG00000000891) ENSSLUG00000000868 atp5mj (ENSSLUG00000000864) GAREM2 (ENSSLUG00000000858) #23 hadhaa (ENSSLUG00000000834) #24 hadhb (ENSSLUG00000000705) #25 tfap2d (ENSSLUG00000000640) tfap2b (ENSSLUG00000000633) ENSSLUG00000000628 map3k5 (ENSSLUG00000000392) lrp11 (ENSSLUG00000000297) pcmt (ENSSLUG00000000285) nup43 (ENSSLUG00000000258) lats1 (ENSSLUG00000000228) rab10 (ENSSLUG00000000210) #22 KIF3C (ENSSLUG00000000179) #21 ENSSLUG00000000169 dtnba (ENSSLUG00000000111) ##18 dnmt3aa (ENSSLUG00000012065) #17 dpysl5b (ENSSLUG00000011961) #35 mapre3b (ENSSLUG00000011889) #36 mapre3b (ENSSLUG00000011871) #36 tmem214 (ENSSLUG00000011508) #37 ccdc25 (ENSSLUG00000011476) esco2 (ENSSLUG00000011470) pbk (ENSSLUG00000011466) scara5 (ENSSLUG00000011445) ENSSLUG00000011435 ENSSLUG00000011431 ENSSLUG00000010663 Channel bull blenny MODERN SPECIES 227 rab10 (ENSCGOG00000019504) #22 lats1 (ENSCGOG00000019506) nup43 (ENSCGOG00000019514) pcmt (ENSCGOG00000019520) nup43 (ENSCGOG00000019529) lrp11 (ENSCGOG00000019538) map3k5 (ENSCGOG00000019543) Cottioidei ANCESTRAL SPECIES 25 ENSGT00940000154071.B ENSGT00390000017022 ENSGT00520000055570.B.k ENSGT00940000163960.b ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000159678 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b ENSGT00940000154045.b Lumpfish MODERN SPECIES 16 ENSCLMG00005022168 ENSCLMG00005022169 ENSCLMG00005022170 ENSCLMG00005022171 scara5 (ENSCLMG00005022172) pbk (ENSCLMG00005022173) esco2 (ENSCLMG00005022175) ccdc25 (ENSCLMG00005022176) tmem214 (ENSCLMG00005022179) #37 mapre3b (ENSCLMG00005022180) #36 dpysl5b (ENSCLMG00005022181) #35 dnmt3aa (ENSCLMG00005022191) #17 dtnba (ENSCLMG00005022513) ##18 ENSCLMG00005022531 KIF3C (ENSCLMG00005022533) #21 rab10 (ENSCLMG00005022536) #22 lats1 (ENSCLMG00005022537) nup43 (ENSCLMG00005022538) pcmt (ENSCLMG00005022539) lrp11 (ENSCLMG00005022540) map3k5 (ENSCLMG00005022543) ENSCLMG00005022558 tfap2b (ENSCLMG00005022560) tfap2d (ENSCLMG00005022563) hadhb (ENSCLMG00005022567) #25 GAREM2 (ENSCLMG00005022620) #23 atp5mj (ENSCLMG00005022622) ENSCLMG00005022624 ENSCLMG00005022633 esr2a (ENSCLMG00005022641) jag2b (ENSCLMG00005022643) Stickleback MODERN SPECIES 18 ENSGACG00000006888 GNPAT (ENSGACG00000006891) ENSGACG00000006916 scara5 (ENSGACG00000006924) pbk (ENSGACG00000006932) esco2 (ENSGACG00000006940) ccdc25 (ENSGACG00000006958) tmem214 (ENSGACG00000006995) #37 mapre3b (ENSGACG00000007011) #36 dpysl5b (ENSGACG00000007021) #35 dnmt3aa (ENSGACG00000007097) #17 dtnba (ENSGACG00000007107) ##18 ENSGACG00000007147 ENSGACG00000007154 KIF3C (ENSGACG00000007156) #21 rab10 (ENSGACG00000007169) #22 lats1 (ENSGACG00000007187) nup43 (ENSGACG00000007209) pcmt (ENSGACG00000007215) lrp11 (ENSGACG00000007258) map3k5 (ENSGACG00000007264) tfap2b (ENSGACG00000007277) tfap2d (ENSGACG00000007319) hadhb (ENSGACG00000007328) #25 GAREM2 (ENSGACG00000007459) #23 ENSGACG00000007463 ENSGACG00000007466 ENSGACG00000007470 ENSGACG00000007478 ENSGACG00000007483 esr2a (ENSGACG00000007514) Percomorphaceae_D ANCESTRAL SPECIES 18 ENSGT00940000177235 ENSGT01100000263671 ENSGT00940000163960.b ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B Anabantaria ANCESTRAL SPECIES 20 ENSGT00940000177326 ENSGT00940000177235 ENSGT01080000257477.B ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b ENSGT00940000154045.b Anabantoidei ANCESTRAL SPECIES 15 ENSGT00390000017022 ENSGT00520000055570.B.k ENSGT00940000163960.b ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b ENSGT00940000154045.b Climbing perch MODERN SPECIES 15 ENSATEG00000020190 ENSATEG00000026234 ENSATEG00000026590 ENSATEG00000020231 SCARA5 (ENSATEG00000020242) pbk (ENSATEG00000020271) ESCO2 (ENSATEG00000020300) ccdc25 (ENSATEG00000026569) tmem214 (ENSATEG00000020343) #37 ENSATEG00000020361 #36 dpysl5b (ENSATEG00000020376) #35 dnmt3aa (ENSATEG00000020419) #17 dtnba (ENSATEG00000020468) ##18 ENSATEG00000020537 KIF3C (ENSATEG00000020596) #21 rab10 (ENSATEG00000020686) #22 LATS1 (ENSATEG00000020702) nup43 (ENSATEG00000020726) PCMT1 (ENSATEG00000020772) lrp11 (ENSATEG00000020789) ENSATEG00000020817 ENSATEG00000030070 tfap2b (ENSATEG00000020889) tfap2d (ENSATEG00000020916) hadhb (ENSATEG00000020947) #25 ENSATEG00000021012 #23 ENSATEG00000021040 ENSATEG00000021045 ENSATEG00000021057 esr2a (ENSATEG00000021093) jag2b (ENSATEG00000021122) Siamese fighting fish MODERN SPECIES 13 ENSBSLG00000017408 ENSBSLG00000017927 ENSBSLG00000017939 ENSBSLG00000017946 SCARA5 (ENSBSLG00000017964) pbk (ENSBSLG00000017980) esco2 (ENSBSLG00000017989) ccdc25 (ENSBSLG00000018011) tmem214 (ENSBSLG00000018049) #37 mapre3b (ENSBSLG00000018993) #36 dpysl5b (ENSBSLG00000019013) #35 dnmt3aa (ENSBSLG00000019122) #17 dtnba (ENSBSLG00000019807) ##18 ENSBSLG00000019946 KIF3C (ENSBSLG00000019951) #21 rab10 (ENSBSLG00000019960) #22 lats1 (ENSBSLG00000019976) nup43 (ENSBSLG00000019995) pcmt (ENSBSLG00000020040) lrp11 (ENSBSLG00000020946) map3k5 (ENSBSLG00000021275) ENSBSLG00000021775 tfap2b (ENSBSLG00000021793) tfap2d (ENSBSLG00000021890) hadhb (ENSBSLG00000021981) #25 GAREM2 (ENSBSLG00000022699) #23 ENSBSLG00000016821 hadhb (ENSBSLG00000016858) #25 ENSBSLG00000016941 ENSBSLG00000016965 ENSBSLG00000016996 Zig-zag eel MODERN SPECIES 16 ENSMAMG00000021292 ENSMAMG00000000315 ENSMAMG00000028358 ENSMAMG00000026781 SCARA5 (ENSMAMG00000000321) pbk (ENSMAMG00000000338) ESCO2 (ENSMAMG00000000348) ccdc25 (ENSMAMG00000000355) tmem214 (ENSMAMG00000000376) #37 ENSMAMG00000000408 #36 dpysl5b (ENSMAMG00000000436) #35 dnmt3aa (ENSMAMG00000000518) #17 dtnba (ENSMAMG00000000593) ##18 ENSMAMG00000024445 KIF3C (ENSMAMG00000000705) #21 rab10 (ENSMAMG00000000782) #22 LATS1 (ENSMAMG00000000819) nup43 (ENSMAMG00000000858) PCMT1 (ENSMAMG00000000917) lrp11 (ENSMAMG00000000977) ENSMAMG00000001009 tfap2b (ENSMAMG00000001154) ENSMAMG00000025165 tfap2d (ENSMAMG00000001191) hadhb (ENSMAMG00000001232) #25 ENSMAMG00000001303 #23 ENSMAMG00000024983 ENSMAMG00000001336 ENSMAMG00000001382 esr2a (ENSMAMG00000025854) jag2b (ENSMAMG00000001486) Carangaria ANCESTRAL SPECIES 18 ENSGT00940000177235 ENSGT01100000263671 ENSGT00940000163960.b ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00510000047967 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b Pleuronectoidei ANCESTRAL SPECIES 11 ENSGT00390000017022 ENSGT00520000055570.B.k ENSGT00940000163960.b ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.a ENSGT00940000165711.b ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00510000047967 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B Tongue sole MODERN SPECIES 17 sprtn (ENSCSEG00000003191) pbk (ENSCSEG00000003198) scara5 (ENSCSEG00000003203) esco2 (ENSCSEG00000003224) ccdc25 (ENSCSEG00000003232) ENSCSEG00000003243 ENSCSEG00000003271 ##34 tmem214 (ENSCSEG00000003274) #37 hist1h2a3 (ENSCSEG00000003283) mapre3b (ENSCSEG00000003286) #36 dpysl5b (ENSCSEG00000003300) #35 dnmt3aa (ENSCSEG00000003308) #17 dtnba (ENSCSEG00000003317) ##18 ENSCSEG00000003350 KIF3C (ENSCSEG00000003356) #21 rab10 (ENSCSEG00000003363) #22 lats1 (ENSCSEG00000003366) nup43 (ENSCSEG00000003372) pcmt (ENSCSEG00000003382) lrp11 (ENSCSEG00000003398) ENSCSEG00000003402 map3k5 (ENSCSEG00000003420) tfap2b (ENSCSEG00000003448) tfap2d (ENSCSEG00000003456) hadhb (ENSCSEG00000003460) #25 fhit (ENSCSEG00000003468) GAREM2 (ENSCSEG00000003471) #23 ENSCSEG00000003484 ENSCSEG00000003491 ENSCSEG00000003494 esr2a (ENSCSEG00000003503) Turbot MODERN SPECIES 12 zgc:194224 (ENSSMAG00000003818) GNPAT (ENSSMAG00000003810) ENSSMAG00000003769 ENSSMAG00000029556 SCARA5 (ENSSMAG00000003736) pbk (ENSSMAG00000021670) ESCO2 (ENSSMAG00000003673) ccdc25 (ENSSMAG00000003651) tmem214 (ENSSMAG00000003636) #37 ENSSMAG00000003610 #36 dpysl5b (ENSSMAG00000003581) #35 dnmt3aa (ENSSMAG00000003540) #17 dtnba (ENSSMAG00000003535) ##18 ENSSMAG00000003516 KIF3C (ENSSMAG00000003483) #21 rab10 (ENSSMAG00000034648) #22 LATS1 (ENSSMAG00000034320) nup43 (ENSSMAG00000003424) PCMT1 (ENSSMAG00000003401) ENSSMAG00000026387 ENSSMAG00000003253 ENSSMAG00000003239 tfap2b (ENSSMAG00000003234) tfap2d (ENSSMAG00000003201) hadhb (ENSSMAG00000003155) #25 ENSSMAG00000003151 ENSSMAG00000003120 #23 ENSSMAG00000003111 ENSSMAG00000034001 ENSSMAG00000002917 nudt14 (ENSSMAG00000033696) Carangaria_A ANCESTRAL SPECIES 13 ENSGT00940000177326 ENSGT00940000177235 ENSGT01100000263671 ENSGT00940000163960.b ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00510000047967 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b Seriola ANCESTRAL SPECIES 4 ENSGT00390000013141 ENSGT00940000166937 ENSGT00950000183149.C.b ENSGT00940000157136.b ENSGT00940000159860.e ENSGT01050000244824.B ENSGT00940000156618.c.a ENSGT01030000234597.a.b.a.b ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00510000047967 ENSGT00530000063834.e.b #23 ENSGT01100000263794 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b ENSGT00940000154045.b Yellowtail amberjack MODERN SPECIES 2936 elp3 (ENSSLDG00000019877) si:ch211-63o20.7 (ENSSLDG00000019915) pnocb (ENSSLDG00000019931) znf395b (ENSSLDG00000019938) paqr8 (ENSSLDG00000019955) mcm3 (ENSSLDG00000019971) il17a/f3 (ENSSLDG00000020022) stmn4 (ENSSLDG00000020032) tmem214 (ENSSLDG00000020045) #37 mapre3b (ENSSLDG00000020081) #36 dpysl5b (ENSSLDG00000020131) #35 dnmt3aa (ENSSLDG00000020176) #17 ENSSLDG00000020301 ##18 ENSSLDG00000020328 KIF3C (ENSSLDG00000020350) #21 rab10 (ENSSLDG00000020361) #22 lats1 (ENSSLDG00000020377) nup43 (ENSSLDG00000020406) pcmt (ENSSLDG00000020446) ENSSLDG00000020473 lrp11 (ENSSLDG00000020480) map3k5 (ENSSLDG00000020493) tfap2b (ENSSLDG00000020559) tfap2d (ENSSLDG00000020577) hadhb (ENSSLDG00000020610) #25 fhit (ENSSLDG00000020653) GAREM2 (ENSSLDG00000020659) #23 ENSSLDG00000020673 ENSSLDG00000020693 esr2a (ENSSLDG00000020964) jag2b (ENSSLDG00000022478) Greater amberjack MODERN SPECIES 10 elp3 (ENSSDUG00000008034) si:ch211-63o20.7 (ENSSDUG00000008025) pnocb (ENSSDUG00000008014) znf395b (ENSSDUG00000007991) paqr8 (ENSSDUG00000007985) mcm3 (ENSSDUG00000007923) il17a/f3 (ENSSDUG00000007890) stmn4 (ENSSDUG00000007867) tmem214 (ENSSDUG00000007836) #37 mapre3b (ENSSDUG00000007781) #36 dpysl5b (ENSSDUG00000007700) #35 dnmt3aa (ENSSDUG00000007664) #17 dtnba (ENSSDUG00000007553) ##18 ENSSDUG00000007522 KIF3C (ENSSDUG00000007492) #21 rab10 (ENSSDUG00000007478) #22 lats1 (ENSSDUG00000007453) nup43 (ENSSDUG00000007426) pcmt (ENSSDUG00000007397) lrp11 (ENSSDUG00000007384) map3k5 (ENSSDUG00000007290) tfap2b (ENSSDUG00000007261) tfap2d (ENSSDUG00000007245) hadhb (ENSSDUG00000007201) #25 fhit (ENSSDUG00000007190) GAREM2 (ENSSDUG00000007171) #23 ENSSDUG00000007159 ENSSDUG00000007145 ENSSDUG00000007133 ENSSDUG00000007119 esr2a (ENSSDUG00000007093) Barramundi perch MODERN SPECIES 317 esco2 (ENSLCAG00010011142) ccdc25 (ENSLCAG00010011148) tmem214 (ENSLCAG00010011167) #37 mapre3b (ENSLCAG00010011273) #36 dpysl5b (ENSLCAG00010011282) #35 dnmt3aa (ENSLCAG00010011402) #17 dtnba (ENSLCAG00010011903) ##18 ENSLCAG00010011916 KIF3C (ENSLCAG00010011929) #21 rab10 (ENSLCAG00010011953) #22 lats1 (ENSLCAG00010011966) nup43 (ENSLCAG00010011975) pcmt (ENSLCAG00010011980) ENSLCAG00010011987 lrp11 (ENSLCAG00010011988) map3k5 (ENSLCAG00010012094) tfap2b (ENSLCAG00010012440) ENSLCAG00010012453 tfap2d (ENSLCAG00010012461) hadhb (ENSLCAG00010012538) #25 fhit (ENSLCAG00010012729) GAREM2 (ENSLCAG00010012732) #23 atp5mj (ENSLCAG00010012736) ENSLCAG00010012739 ENSLCAG00010012775 Ovalentaria ANCESTRAL SPECIES 19 ENSGT00940000177326 ENSGT00940000177235 ENSGT01100000263671 ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a ENSGT00940000155691.c.b ENSGT00940000156521.b ENSGT01030000236465 ENSGT01060000248856 ENSGT00940000165711.b ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 Ovalentaria_B ANCESTRAL SPECIES 17 ENSGT00940000177326 ENSGT00940000177235 ENSGT01100000263671 ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B Cichlidae ANCESTRAL SPECIES 12 ENSGT00940000177326 ENSGT00940000177235 ENSGT01100000263671 ENSGT00940000164854.b.a ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B Midas cichlid MODERN SPECIES 96 dpysl5b (ENSACIG00000023831) #35 dnmt3aa (ENSACIG00000023812) #17 dtnba (ENSACIG00000023804) ##18 ENSACIG00000023799 KIF3C (ENSACIG00000023781) #21 rab10 (ENSACIG00000023777) #22 lats1 (ENSACIG00000023776) nup43 (ENSACIG00000023771) pcmt (ENSACIG00000023767) ENSACIG00000023757 ENSACIG00000023755 map3k5 (ENSACIG00000023750) ENSACIG00000023746 ENSACIG00000023743 tfap2b (ENSACIG00000023602) tfap2d (ENSACIG00000023523) hadhb (ENSACIG00000023487) #25 hadhaa (ENSACIG00000023477) #24 GAREM2 (ENSACIG00000023472) #23 atp5mj (ENSACIG00000023468) Pseudocrenilabrinae ANCESTRAL SPECIES 6 ENSGT00940000177326 ENSGT00940000177235 ENSGT01100000263671 ENSGT00940000178466 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B Nile tilapia MODERN SPECIES 6 ENSONIG00000032999 TP5 (ENSONIG00000031739) ENSONIG00000038526 ENSONIG00000038417 ENSONIG00000018299 ENSONIG00000005530 ENSONIG00000028874 ENSONIG00000028740 tmem214 (ENSONIG00000005531) #37 mapre3b (ENSONIG00000005534) #36 dpysl5b (ENSONIG00000005535) #35 dnmt3aa (ENSONIG00000005542) #17 dtnba (ENSONIG00000005550) ##18 ENSONIG00000005558 KIF3C (ENSONIG00000005560) #21 rab10 (ENSONIG00000028151) #22 lats1 (ENSONIG00000005566) nup43 (ENSONIG00000005570) pcmt (ENSONIG00000005572) lrp11 (ENSONIG00000005575) ENSONIG00000029607 map3k5 (ENSONIG00000005579) tfap2b (ENSONIG00000005583) tfap2d (ENSONIG00000005592) hadhb (ENSONIG00000005593) #25 hadhaa (ENSONIG00000005605) #24 GAREM2 (ENSONIG00000005617) #23 atp5mj (ENSONIG00000035166) ENSONIG00000005623 esr2a (ENSONIG00000005633) jag2b (ENSONIG00000005636) Pseudocrenilabrinae_A ANCESTRAL SPECIES 3 ENSGT00940000178466 ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00940000154390.E ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000159678 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B Lyretail cichlid MODERN SPECIES 314 ENSNBRG00000003680 scara5 (ENSNBRG00000003646) pbk (ENSNBRG00000003621) esco2 (ENSNBRG00000003574) ccdc25 (ENSNBRG00000003550) ENSNBRG00000003523 tmem214 (ENSNBRG00000003477) #37 mapre3b (ENSNBRG00000003445) #36 dpysl5b (ENSNBRG00000003386) #35 dnmt3aa (ENSNBRG00000003312) #17 dtnba (ENSNBRG00000003263) ##18 ENSNBRG00000003232 KIF3C (ENSNBRG00000003196) #21 rab10 (ENSNBRG00000003165) #22 lats1 (ENSNBRG00000003131) nup43 (ENSNBRG00000003075) pcmt (ENSNBRG00000003034) ENSNBRG00000003018 ENSNBRG00000003008 map3k5 (ENSNBRG00000002912) tfap2b (ENSNBRG00000002887) tfap2d (ENSNBRG00000002857) hadhb (ENSNBRG00000002804) #25 hadhaa (ENSNBRG00000002547) #24 GAREM2 (ENSNBRG00000002514) #23 ENSNBRG00000002450 esr2a (ENSNBRG00000002405) jag2b (ENSNBRG00000002325) nudt14 (ENSNBRG00000002306) Haplochromini ANCESTRAL SPECIES 13 ENSGT00940000178466 ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00940000154390.E ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000159678 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B Burton s mouthbrooder MODERN SPECIES 401 dtnba (ENSHBUG00000010600) ##18 ENSHBUG00000010618 ENSHBUG00000010621 KIF3C (ENSHBUG00000010630) #21 rab10 (ENSHBUG00000010649) #22 lats1 (ENSHBUG00000010689) nup43 (ENSHBUG00000010733) pcmt (ENSHBUG00000010762) lrp11 (ENSHBUG00000010779) map3k5 (ENSHBUG00000010928) ENSHBUG00000010951 tfap2b (ENSHBUG00000010991) tfap2d (ENSHBUG00000011014) hadhb (ENSHBUG00000011032) #25 hadhaa (ENSHBUG00000011334) #24 GAREM2 (ENSHBUG00000011363) #23 atp5mj (ENSHBUG00000011374) ENSHBUG00000011408 ENSHBUG00000011495 esr2a (ENSHBUG00000011554) Haplochromini_A ANCESTRAL SPECIES 11 ENSGT01100000263671 ENSGT00940000178466 ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00940000154390.E ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000159678 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a.f.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B P. nyererei MODERN SPECIES 369 ENSPNYG00000022036 ENSPNYG00000022039 SCARA5 (ENSPNYG00000022044) pbk (ENSPNYG00000022056) esco2 (ENSPNYG00000022065) ccdc25 (ENSPNYG00000022074) ENSPNYG00000022082 tmem214 (ENSPNYG00000022092) #37 mapre3b (ENSPNYG00000022130) #36 dpysl5b (ENSPNYG00000022155) #35 dnmt3aa (ENSPNYG00000022177) #17 ENSPNYG00000022195 dtnba (ENSPNYG00000022207) ##18 ENSPNYG00000000695 KIF3C (ENSPNYG00000000722) #21 rab10 (ENSPNYG00000000820) #22 lats1 (ENSPNYG00000000828) nup43 (ENSPNYG00000000835) pcmt (ENSPNYG00000000882) ENSPNYG00000000921 ENSPNYG00000000948 map3k5 (ENSPNYG00000000969) ENSPNYG00000001091 tfap2b (ENSPNYG00000001101) tfap2d (ENSPNYG00000001125) hadhb (ENSPNYG00000001173) #25 hadhaa (ENSPNYG00000001189) #24 GAREM2 (ENSPNYG00000001278) #23 ENSPNYG00000001312 esr2a (ENSPNYG00000001357) jag2b (ENSPNYG00000001393) Haplochromini_B ANCESTRAL SPECIES 34 ENSGT00940000178466 ENSGT00940000177410 ENSGT00940000164854.b.a ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00940000154390.E ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000159678 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.b ENSGT00940000165711.a.a.f.a ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B Eastern happy MODERN SPECIES 6 scara5 (ENSACLG00000027470) pbk (ENSACLG00000027459) esco2 (ENSACLG00000027454) ccdc25 (ENSACLG00000027451) ENSACLG00000027449 ENSACLG00000027446 tmem214 (ENSACLG00000027442) #37 mapre3b (ENSACLG00000027432) #36 dpysl5b (ENSACLG00000027406) #35 dpysl5b (ENSACLG00000027387) #35 ENSACLG00000027381 dnmt3aa (ENSACLG00000027364) #17 dtnba (ENSACLG00000027349) ##18 ENSACLG00000027339 KIF3C (ENSACLG00000027331) #21 rab10 (ENSACLG00000027326) #22 ENSACLG00000027325 lats1 (ENSACLG00000027320) nup43 (ENSACLG00000027309) pcmt (ENSACLG00000027300) ENSACLG00000027292 ENSACLG00000027288 ENSACLG00000027285 map3k5 (ENSACLG00000027238) ENSACLG00000027229 tfap2b (ENSACLG00000027222) tfap2d (ENSACLG00000027212) hadhb (ENSACLG00000027202) #25 hadhaa (ENSACLG00000027153) #24 GAREM2 (ENSACLG00000027126) #23 atp5mj (ENSACLG00000027118) Zebra mbuna MODERN SPECIES 1097 ENSMZEG00005005585 ENSMZEG00005005578 ENSMZEG00005005517 scara5 (ENSMZEG00005005502) pbk (ENSMZEG00005005475) esco2 (ENSMZEG00005005429) ccdc25 (ENSMZEG00005005405) ENSMZEG00005005393 tmem214 (ENSMZEG00005005380) #37 mapre3b (ENSMZEG00005005343) #36 dpysl5b (ENSMZEG00005005296) #35 dnmt3aa (ENSMZEG00005005225) #17 dtnba (ENSMZEG00005005170) ##18 ENSMZEG00005005140 KIF3C (ENSMZEG00005005122) #21 rab10 (ENSMZEG00005005043) #22 lats1 (ENSMZEG00005005028) nup43 (ENSMZEG00005004999) pcmt (ENSMZEG00005004971) ENSMZEG00005004955 ENSMZEG00005004945 map3k5 (ENSMZEG00005004868) ENSMZEG00005004842 tfap2b (ENSMZEG00005004825) tfap2d (ENSMZEG00005004802) hadhb (ENSMZEG00005004793) #25 hadhaa (ENSMZEG00005004774) #24 GAREM2 (ENSMZEG00005004673) #23 atp5mj (ENSMZEG00005004660) ENSMZEG00005004620 ENSMZEG00005004581 Pomacentridae ANCESTRAL SPECIES 21 ENSGT00940000177326 ENSGT00940000177235 ENSGT01080000257477.B ENSGT01080000257477.A ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.a.b ENSGT01060000248856 ENSGT00940000165711.b ENSGT00940000159155 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT01100000263794 ENSGT00940000154656.ob.b Pomacentridae_A ANCESTRAL SPECIES 25 ENSGT00940000165084 ENSGT00940000157993 ENSGT00390000004172 ENSGT01090000260082.d.b.b ENSGT00940000167198 ENSGT00940000156034.a ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT01060000248856 ENSGT00940000165711.b ENSGT00940000159155 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01100000263794 ENSGT00940000154656.ob.b ENSGT00940000156116.B.g ENSGT00940000164854.b.b Amphiprion ANCESTRAL SPECIES 14 ENSGT00940000165084 ENSGT00940000157993 ENSGT00390000004172 ENSGT01090000260082.d.b.b ENSGT00940000167198 ENSGT00940000160610 ENSGT00940000156034.a ENSGT00940000158248.b #32 ENSGT00390000017237 #33 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.b ENSGT00940000164472.a.b.c.a.a.a ENSGT00940000159155 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00940000154677.b.b #24 ENSGT00530000063834.e.b #23 ENSGT01100000263794 ENSGT00940000162226.a ENSGT00940000154656.ob.b ENSGT00940000156116.B.g Orange clownfish MODERN SPECIES 2 tagapb (ENSAPEG00000005128) rsph3 (ENSAPEG00000005139) ezrb (ENSAPEG00000005158) ENSAPEG00000005235 ENSAPEG00000005249 enpp1 (ENSAPEG00000005267) kcnk3a (ENSAPEG00000005293) #32 slc35f6 (ENSAPEG00000005371) #33 tmem214 (ENSAPEG00000005390) #37 mapre3b (ENSAPEG00000005411) #36 dpysl5b (ENSAPEG00000005446) #35 dnmt3aa (ENSAPEG00000005497) #17 ENSAPEG00000005524 dtnba (ENSAPEG00000005713) ##18 KIF3C (ENSAPEG00000005875) #21 rab10 (ENSAPEG00000005895) #22 lats1 (ENSAPEG00000005925) nup43 (ENSAPEG00000005959) pcmt (ENSAPEG00000005991) lrp11 (ENSAPEG00000006012) ENSAPEG00000006025 map3k5 (ENSAPEG00000006044) tfap2b (ENSAPEG00000006137) tfap2d (ENSAPEG00000006165) hadhb (ENSAPEG00000006210) #25 hadhaa (ENSAPEG00000006281) #24 GAREM2 (ENSAPEG00000006332) #23 ENSAPEG00000006373 ENSAPEG00000006379 ENSAPEG00000006397 esr2a (ENSAPEG00000006416) Clown anemonefish MODERN SPECIES 3418 ENSAOCG00000002688 enpp1 (ENSAOCG00000021765) kcnk3a (ENSAOCG00000021785) #32 slc35f6 (ENSAOCG00000001957) #33 tmem214 (ENSAOCG00000021837) #37 mapre3b (ENSAOCG00000021865) #36 dpysl5b (ENSAOCG00000021925) #35 dnmt3aa (ENSAOCG00000021991) #17 ENSAOCG00000022006 dtnba (ENSAOCG00000022134) ##18 KIF3C (ENSAOCG00000022180) #21 rab10 (ENSAOCG00000022208) #22 lats1 (ENSAOCG00000022237) nup43 (ENSAOCG00000022255) pcmt (ENSAOCG00000002467) lrp11 (ENSAOCG00000022286) ENSAOCG00000022299 map3k5 (ENSAOCG00000022391) tfap2b (ENSAOCG00000022433) tfap2d (ENSAOCG00000022463) hadhb (ENSAOCG00000022509) #25 hadhaa (ENSAOCG00000022641) #24 GAREM2 (ENSAOCG00000022689) #23 ENSAOCG00000022706 ENSAOCG00000022714 ENSAOCG00000022740 esr2a (ENSAOCG00000022759) Spiny chromis MODERN SPECIES 384 kcnk3a (ENSAPOG00000012307) #32 slc35f6 (ENSAPOG00000012347) #33 tmem214 (ENSAPOG00000012360) #37 mapre3b (ENSAPOG00000012402) #36 dpysl5b (ENSAPOG00000012476) #35 dnmt3aa (ENSAPOG00000012525) #17 dtnba (ENSAPOG00000012673) ##18 ENSAPOG00000000343 KIF3C (ENSAPOG00000012783) #21 rab10 (ENSAPOG00000012826) #22 lats1 (ENSAPOG00000012905) nup43 (ENSAPOG00000012958) pcmt (ENSAPOG00000013007) ENSAPOG00000013022 ENSAPOG00000013052 map3k5 (ENSAPOG00000013200) Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 378 esco2 (ENSSPAG00000015762) ccdc25 (ENSSPAG00000015787) tmem214 (ENSSPAG00000015806) #37 mapre3b (ENSSPAG00000015835) #36 dpysl5b (ENSSPAG00000015889) #35 dnmt3aa (ENSSPAG00000015957) #17 dtnba (ENSSPAG00000016121) ##18 ENSSPAG00000016314 KIF3C (ENSSPAG00000016323) #21 rab10 (ENSSPAG00000016339) #22 lats1 (ENSSPAG00000016362) nup43 (ENSSPAG00000016389) pcmt (ENSSPAG00000016434) ENSSPAG00000016462 ENSSPAG00000016472 map3k5 (ENSSPAG00000016490) tfap2b (ENSSPAG00000016614) tfap2d (ENSSPAG00000016633) hadhb (ENSSPAG00000016668) #25 hadhaa (ENSSPAG00000016716) #24 GAREM2 (ENSSPAG00000016759) #23 atp5mj (ENSSPAG00000016776) ENSSPAG00000016790 Bicolor damselfish MODERN SPECIES 775 ENSSPAG00000015085 TNRC6C (ENSSPAG00000014977) rab10 (ENSSPAG00000014963) #22 ENSSPAG00000014960 septin9a (ENSSPAG00000014927) jpt1b (ENSSPAG00000014906) ENSSPAG00000014896 NUP85 (ENSSPAG00000014805) GGA3 (ENSSPAG00000014749) mrps7 (ENSSPAG00000014729) mif4gda (ENSSPAG00000014715) slc25a19 (ENSSPAG00000014696) ENSSPAG00000014680 ENSSPAG00000014671 ENSSPAG00000014663 CACNG1 (ENSSPAG00000014651) cacng4b (ENSSPAG00000014640) ENSSPAG00000014634 Atherinomorphae ANCESTRAL SPECIES 18 ENSGT00520000055570.B.k ENSGT00940000155321.e ENSGT01100000263671 ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT01060000248856 ENSGT00940000165711.b ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b Oryzias ANCESTRAL SPECIES 50 ENSGT00940000158188 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.b ENSGT00940000159155 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b ENSGT00940000154045.b ENSGT00410000025918 Oryzias_b ANCESTRAL SPECIES 109 ENSGT00940000158188 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.b Indian medaka MODERN SPECIES 22 vipas39 (ENSOMEG00000022673) ENSOMEG00000022641 cdc42bpb (ENSOMEG00000022627) ENSOMEG00000022566 ENSOMEG00000022554 ENSOMEG00000022550 MAN1A1 (ENSOMEG00000022544) tmem214 (ENSOMEG00000000596) #37 mapre3b (ENSOMEG00000000769) #36 dpysl5b (ENSOMEG00000022472) #35 dnmt3aa (ENSOMEG00000022438) #17 dtnba (ENSOMEG00000022344) ##18 ENSOMEG00000022190 ENSOMEG00000022173 KIF3C (ENSOMEG00000022156) #21 rab10 (ENSOMEG00000022106) #22 lats1 (ENSOMEG00000022074) nup43 (ENSOMEG00000022035) pcmt (ENSOMEG00000021999) lrp11 (ENSOMEG00000021973) NT5E (ENSOMEG00000021931) COX7A2 (ENSOMEG00000021844) FILIP1 (ENSOMEG00000021826) eif2b2 (ENSOMEG00000021791) vsx2 (ENSOMEG00000021724) ENSOMEG00000021630 abcd4 (ENSOMEG00000021555) kcnh5a (ENSOMEG00000021461) L3HYPDH (ENSOMEG00000021423) daam1b (ENSOMEG00000021362) ppp1r13bb (ENSOMEG00000021175) Javanese ricefish MODERN SPECIES 16 esr2a (ENSOJAG00000012878) atp5mj (ENSOJAG00000012832) GAREM2 (ENSOJAG00000012736) #23 hadhb (ENSOJAG00000012650) #25 tfap2d (ENSOJAG00000012592) tfap2b (ENSOJAG00000012496) map3k5 (ENSOJAG00000011429) MAN1A1 (ENSOJAG00000011012) tmem214 (ENSOJAG00000010825) #37 ENSOJAG00000010800 #36 dpysl5b (ENSOJAG00000010611) #35 ENSOJAG00000009087 dtnba (ENSOJAG00000006738) ##18 ENSOJAG00000006367 KIF3C (ENSOJAG00000006190) #21 rab10 (ENSOJAG00000006154) #22 lats1 (ENSOJAG00000006124) nup43 (ENSOJAG00000006037) pcmt (ENSOJAG00000005946) lrp11 (ENSOJAG00000005919) ENSOJAG00000005878 MAN1A1 (ENSOJAG00000005855) ENSOJAG00000004508 ENSOJAG00000004479 ENSOJAG00000004299 btbd6b (ENSOJAG00000004259) ENSOJAG00000004233 brf1b (ENSOJAG00000004203) xrcc3 (ENSOJAG00000004133) serpina10a (ENSOJAG00000004051) ENSOJAG00000004024 Oryzias_a ANCESTRAL SPECIES 39 ENSGT00940000158188 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT01060000248856 ENSGT00940000153528.a.b.a.b ENSGT00940000160053 ENSGT01050000244864.A.a.a ENSGT01050000244864.A.a.b.a.b.c ENSGT01050000244864.A.a.b.a.a.a ENSGT00390000018361 ENSGT00950000183186.A ENSGT01060000248652 ENSGT00980000202128 ENSGT00940000158461 ENSGT00390000002675 Japanese Medaka HdrR MODERN SPECIES 16 prrc1 (ENSORLG00000022750) YTHDC2 (ENSORLG00000019098) ENSORLG00000023245 ENSORLG00000024078 dcp2 (ENSORLG00000019046) ENSORLG00000017683 tmem214 (ENSORLG00000017680) #37 mapre3b (ENSORLG00000017672) #36 dpysl5b (ENSORLG00000017657) #35 ENSORLG00000028694 dnmt3aa (ENSORLG00000017648) #17 dtnba (ENSORLG00000017644) ##18 ENSORLG00000028198 ENSORLG00000017639 ENSORLG00000017637 #21 rab10 (ENSORLG00000017635) #22 lats1 (ENSORLG00000017630) nup43 (ENSORLG00000017628) pcmt (ENSORLG00000017625) ENSORLG00000029297 ENSORLG00000025702 tbc1d32 (ENSORLG00000017620) hsdl1 (ENSORLG00000017614) gja11 (ENSORLG00000017610) gja12.1 (ENSORLG00000017606) ENSORLG00000022810 si:ch73-111k22.2 (ENSORLG00000025176) ENSORLG00000028235 ENSORLG00000025043 ttc13 (ENSORLG00000017601) arv1 (ENSORLG00000024766) Chinese medaka MODERN SPECIES 62 MAN1A1 (ENSOSIG00000021480) tmem214 (ENSOSIG00000021453) #37 mapre3b (ENSOSIG00000021451) #36 dpysl5b (ENSOSIG00000021441) #35 dnmt3aa (ENSOSIG00000020921) #17 dtnba (ENSOSIG00000019146) ##18 ENSOSIG00000019030 KIF3C (ENSOSIG00000019027) #21 rab10 (ENSOSIG00000019020) #22 lats1 (ENSOSIG00000019016) nup43 (ENSOSIG00000018980) pcmt (ENSOSIG00000018966) ENSOSIG00000018965 tbc1d32 (ENSOSIG00000018962) hsdl1 (ENSOSIG00000018961) gja11 (ENSOSIG00000018959) ENSOSIG00000018957 gja12.1 (ENSOSIG00000018955) si:ch73-111k22.2 (ENSOSIG00000018953) ENSOSIG00000018952 ENSOSIG00000018950 ENSOSIG00000018945 ttc13 (ENSOSIG00000018899) arv1 (ENSOSIG00000018877) Cyprinodontiformes ANCESTRAL SPECIES 14 ENSGT00520000055570.B.k ENSGT00940000155321.e ENSGT01100000263671.a.a ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT01060000248856 ENSGT00940000165711.b ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b Aplocheiloidei ANCESTRAL SPECIES 27 ENSGT00940000155321.e ENSGT01100000263671.a.b ENSGT01100000263671.a.a ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT01060000248856 ENSGT00940000165711.b ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00530000063834.e.b #23 ENSGT01060000248685 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b Turquoise killifish MODERN SPECIES 1613 ENSNFUG00015003488 ENSNFUG00015003491 ENSNFUG00015003493 SCARA5 (ENSNFUG00015003495) pbk (ENSNFUG00015003511) esco2 (ENSNFUG00015003523) CCDC25 (ENSNFUG00015003530) tmem214 (ENSNFUG00015003543) #37 MAPRE3 (ENSNFUG00015003605) #36 dpysl5b (ENSNFUG00015003617) #35 dnmt3aa (ENSNFUG00015003738) #17 DTNB (ENSNFUG00015004216) ##18 ENSNFUG00015005529 KIF3C (ENSNFUG00015005555) #21 ENSNFUG00015005601 RAB10 (ENSNFUG00015005646) #22 lats1 (ENSNFUG00015005664) NUP43 (ENSNFUG00015005692) pcmt (ENSNFUG00015005708) ENSNFUG00015000060 ENSNFUG00015000064 map3k5 (ENSNFUG00015000396) ENSNFUG00015000891 ENSNFUG00015000894 TFAP2B (ENSNFUG00015000900) TFAP2D (ENSNFUG00015000914) hadhb (ENSNFUG00015000932) #25 GAREM2 (ENSNFUG00015001027) #23 atp5mj (ENSNFUG00015001030) ENSNFUG00015001035 esr2a (ENSNFUG00015001117) Mangrove rivulus MODERN SPECIES 20 tmem214 (ENSKMAG00000022232) #37 mapre3b (ENSKMAG00000022229) #36 dpysl5b (ENSKMAG00000022225) #35 dnmt3aa (ENSKMAG00000022221) #17 dtnba (ENSKMAG00000022216) ##18 ENSKMAG00000022215 KIF3C (ENSKMAG00000022214) #21 rab10 (ENSKMAG00000022212) #22 lats1 (ENSKMAG00000022210) nup43 (ENSKMAG00000022209) pcmt (ENSKMAG00000022208) lrp11 (ENSKMAG00000022206) map3k5 (ENSKMAG00000022202) ENSKMAG00000022199 tfap2b (ENSKMAG00000022197) tfap2d (ENSKMAG00000022196) ENSKMAG00000022194 hadhb (ENSKMAG00000022192) #25 GAREM2 (ENSKMAG00000022189) #23 atp5mj (ENSKMAG00000022186) ENSKMAG00000022182 esr2a (ENSKMAG00000022169) ENSKMAG00000022168 Cyprinodontoidei ANCESTRAL SPECIES 12 ENSGT00390000017022 ENSGT00520000055570.B.k ENSGT00940000155321.e ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT01060000248856 ENSGT00940000165711.b ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00530000063834.e.b #23 ENSGT01100000263794 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b Poeciliinae ANCESTRAL SPECIES 15 ENSGT00940000154071.B ENSGT00390000017022 ENSGT00520000055570.B.k ENSGT00940000155321.e ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT01060000248856 ENSGT00940000165711.b ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00530000063834.e.b #23 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b ENSGT00940000154045.b Platyfish MODERN SPECIES 6 ENSXMAG00000025316 ENSXMAG00000029762 ENSXMAG00000022093 ENSXMAG00000006354 scara5 (ENSXMAG00000006351) pbk (ENSXMAG00000006345) esco2 (ENSXMAG00000010833) ccdc25 (ENSXMAG00000010835) tmem214 (ENSXMAG00000013122) #37 mapre3b (ENSXMAG00000013109) #36 dpysl5b (ENSXMAG00000013095) #35 dnmt3aa (ENSXMAG00000015620) #17 dtnba (ENSXMAG00000006317) ##18 ENSXMAG00000006310 KIF3C (ENSXMAG00000006298) #21 rab10 (ENSXMAG00000023858) #22 lats1 (ENSXMAG00000006278) nup43 (ENSXMAG00000006262) pcmt (ENSXMAG00000006249) lrp11 (ENSXMAG00000021431) map3k5 (ENSXMAG00000016278) tfap2b (ENSXMAG00000029265) tfap2d (ENSXMAG00000021464) hadhb (ENSXMAG00000006169) #25 ENSXMAG00000028960 ENSXMAG00000006155 ENSXMAG00000006145 esr2a (ENSXMAG00000006136) jag2b (ENSXMAG00000025537) nudt14 (ENSXMAG00000006125) Poecilia ANCESTRAL SPECIES 9 ENSGT00390000017022 ENSGT00520000055570.B.k ENSGT00940000155321.e ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT01060000248856 ENSGT00940000165711.b ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00530000063834.e.b #23 ENSGT00940000154656.ob.b.y ENSGT00940000178561 ENSGT00940000154656.ob.b.z.b ENSGT00940000156116.B Guppy MODERN SPECIES 452 ENSPREG00000016952 ENSPREG00000016944 ENSPREG00000016938 ENSPREG00000016640 scara5 (ENSPREG00000016566) pbk (ENSPREG00000016541) esco2 (ENSPREG00000016517) ccdc25 (ENSPREG00000016488) tmem214 (ENSPREG00000016453) #37 mapre3b (ENSPREG00000016432) #36 dpysl5b (ENSPREG00000016401) #35 dnmt3aa (ENSPREG00000016371) #17 dtnba (ENSPREG00000016330) ##18 ENSPREG00000016325 KIF3C (ENSPREG00000016235) #21 rab10 (ENSPREG00000016055) #22 lats1 (ENSPREG00000016002) nup43 (ENSPREG00000015983) pcmt (ENSPREG00000015965) ENSPREG00000015950 ENSPREG00000015933 map3k5 (ENSPREG00000015885) ENSPREG00000015861 tfap2b (ENSPREG00000015846) tfap2d (ENSPREG00000015826) hadhb (ENSPREG00000015797) #25 GAREM2 (ENSPREG00000015750) #23 ENSPREG00000015725 ENSPREG00000015712 ENSPREG00000015679 esr2a (ENSPREG00000015654) NAME_6 ANCESTRAL SPECIES 2 ENSGT00940000177410 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.b ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00530000063834.e.b #23 ENSGT00940000154656.ob.b.y ENSGT00940000154656.ob.b.z.b ENSGT00940000156116.B ENSGT00940000164854.b ENSGT00940000154045.b Amazon molly MODERN SPECIES 253 ENSPFOG00000014455 scara5 (ENSPFOG00000014464) pbk (ENSPFOG00000014510) esco2 (ENSPFOG00000014531) ccdc25 (ENSPFOG00000014567) tmem214 (ENSPFOG00000014631) #37 mapre3b (ENSPFOG00000024031) #36 dpysl5b (ENSPFOG00000014704) #35 dnmt3aa (ENSPFOG00000014869) #17 dtnba (ENSPFOG00000014988) ##18 ENSPFOG00000020606 KIF3C (ENSPFOG00000015190) #21 rab10 (ENSPFOG00000015245) #22 lats1 (ENSPFOG00000015291) nup43 (ENSPFOG00000023118) pcmt (ENSPFOG00000015367) lrp11 (ENSPFOG00000015406) map3k5 (ENSPFOG00000015511) tfap2b (ENSPFOG00000015812) tfap2d (ENSPFOG00000015857) ENSPFOG00000015882 hadhb (ENSPFOG00000015886) #25 GAREM2 (ENSPFOG00000015932) #23 ENSPFOG00000015957 ENSPFOG00000015966 esr2a (ENSPFOG00000016031) jag2b (ENSPFOG00000016087) nudt14 (ENSPFOG00000016378) Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 134 agmo (ENSPLAG00000005316) ENSPLAG00000005279 scara5 (ENSPLAG00000005261) pbk (ENSPLAG00000005224) esco2 (ENSPLAG00000005208) ccdc25 (ENSPLAG00000005200) tmem214 (ENSPLAG00000005180) #37 mapre3b (ENSPLAG00000005167) #36 dpysl5b (ENSPLAG00000005156) #35 dnmt3aa (ENSPLAG00000005113) #17 dtnba (ENSPLAG00000005000) ##18 ENSPLAG00000004946 KIF3C (ENSPLAG00000004923) #21 rab10 (ENSPLAG00000004910) #22 Sailfin molly MODERN SPECIES 564 rab10 (ENSPLAG00000004067) #22 lats1 (ENSPLAG00000004063) nup43 (ENSPLAG00000004056) pcmt (ENSPLAG00000004032) lrp11 (ENSPLAG00000004007) map3k5 (ENSPLAG00000003973) ENSPLAG00000003886 tfap2b (ENSPLAG00000003880) tfap2d (ENSPLAG00000003872) NAME_4 ANCESTRAL SPECIES 84 ENSGT01100000263671.a.b ENSGT01100000263988 ENSGT01100000263671.b ENSGT01100000263671.a.a ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000162464.r ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00940000157684 ENSGT00390000004803 ENSGT00950000183032.B.b.b ENSGT00940000165711.b ENSGT00940000159155 ENSGT00940000177318 ENSGT00950000182848.c.b.b.b ENSGT00950000182848.d ENSGT01030000234626.A.b #25 ENSGT00530000063834.e.b #23 ENSGT01100000263794 ENSGT00940000154656.ob.b ENSGT00940000156116.B ENSGT00940000164854.b ENSGT00940000154045.b Sheepshead minnow MODERN SPECIES 176 ENSCVAG00000021881 ENSCVAG00000021871 ENSCVAG00000021864 scara5 (ENSCVAG00000000777) pbk (ENSCVAG00000021831) esco2 (ENSCVAG00000021780) ccdc25 (ENSCVAG00000021759) ENSCVAG00000021747 tmem214 (ENSCVAG00000021738) #37 mapre3b (ENSCVAG00000000554) #36 dpysl5b (ENSCVAG00000021693) #35 dnmt3aa (ENSCVAG00000021660) #17 dtnba (ENSCVAG00000021632) ##18 ENSCVAG00000021605 KIF3C (ENSCVAG00000021603) #21 rab10 (ENSCVAG00000021597) #22 lats1 (ENSCVAG00000021576) nup43 (ENSCVAG00000021546) pcmt (ENSCVAG00000021517) lrp11 (ENSCVAG00000021482) map3k5 (ENSCVAG00000021465) tfap2b (ENSCVAG00000021386) tfap2d (ENSCVAG00000021356) hadhb (ENSCVAG00000021297) #25 ENSCVAG00000021085 Mummichog MODERN SPECIES 2354 ENSFHEG00000016637 ##18 ENSFHEG00000016630 KIF3C (ENSFHEG00000016624) #21 rab10 (ENSFHEG00000016577) #22 lats1 (ENSFHEG00000016564) nup43 (ENSFHEG00000016531) pcmt (ENSFHEG00000016480) lrp11 (ENSFHEG00000016464) map3k5 (ENSFHEG00000016450) ENSFHEG00000016302 tfap2b (ENSFHEG00000016294) tfap2d (ENSFHEG00000016270) hadhb (ENSFHEG00000016241) #25 GAREM2 (ENSFHEG00000016152) #23 ENSFHEG00000016105 ENSFHEG00000016077 ENSFHEG00000016059 esr2a (ENSFHEG00000015962) jag2b (ENSFHEG00000015794) Protacanthopterygii ANCESTRAL SPECIES 92 ENSGT01040000240523 ENSGT00950000183107.a.a ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803.a ENSGT00950000183117.b #27 ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b #36 ENSGT01030000234527.A.a.a.b.b #35 ENSGT00940000155459.x.a #17 ENSGT00940000153897.b.b ##18 ENSGT00940000153739.a.b.s #21 ENSGT00940000156975 #22 ENSGT00530000063834.e.b #23 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d Northern pike MODERN SPECIES 17 ENSELUG00000007890 ENSELUG00000007929 ENSELUG00000007912 irak1bp1 (ENSELUG00000007939) tbx18 (ENSELUG00000007946) ENSELUG00000007959 selenoi (ENSELUG00000007979) #27 ost4 (ENSELUG00000007999) agbl5 (ENSELUG00000008027) tmem214 (ENSELUG00000008066) #37 mapre3b (ENSELUG00000008103) #36 dpysl5b (ENSELUG00000008137) #35 dnmt3aa (ENSELUG00000008170) #17 dtnba (ENSELUG00000008203) ##18 KIF3C (ENSELUG00000008250) #21 rab10 (ENSELUG00000008334) #22 GAREM2 (ENSELUG00000024865) #23 hadhb (ENSELUG00000008448) #25 tfap2d (ENSELUG00000008515) vsx2 (ENSELUG00000008538) ENSELUG00000008557 abcd4 (ENSELUG00000008610) HMBOX1 (ENSELUG00000008628) KIF13B (ENSELUG00000008682) elp3 (ENSELUG00000008716) si:ch211-63o20.7 (ENSELUG00000027051) ENSELUG00000008760 ENSELUG00000008786 pnocb (ENSELUG00000008865) znf395b (ENSELUG00000008831) paqr8 (ENSELUG00000008884) Salmoninae ANCESTRAL SPECIES 886 ENSGT00490000043329.a.b.g.b.m #36 ENSGT00940000155459.x.a #17 ENSGT00940000153739.a.b.s.g #21 ENSGT00940000156975 #22 ENSGT00530000063834.e.b #23 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d Huchen DUPLICATION Huchen MODERN SPECIES 8579 ENSHHUG00000009817 #22 Huchen MODERN SPECIES 6168 RAB10 (ENSHHUG00000018116) #22 Huchen MODERN SPECIES 3944 RAB10 (ENSHHUG00000048111) #22 Salmoninae_a ANCESTRAL SPECIES 30 ENSGT00950000183215.c.a.a ENSGT00950000182985.b.a.g ENSGT00940000155678 ENSGT00390000012474 ENSGT00940000161165.j ENSGT00390000001965 ENSGT00390000004348 ENSGT00940000171406 ENSGT00520000055570.B.l ENSGT00940000166083.e.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b.n #36 ENSGT00940000153739.a.b.s.h #21 ENSGT00940000156975 #22 ENSGT00530000063834.e.b #23 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d.e ENSGT00940000160562 ENSGT00940000156406.b Oncorhynchus DUPLICATION Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 30 ENSGT00390000016516.f.b ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b.n #36 ENSGT00940000153739.a.b.s.h #21 ENSGT00940000156975.n.a #22 ENSGT00530000063834.e.b #23 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d.e ENSGT00940000160562 ENSGT00940000156406.b ENSGT00940000166083.e.b ENSGT00520000055570.B.l ENSGT00940000171406 ENSGT01060000251035 ENSGT00390000001965 ENSGT00940000161165.j ENSGT00390000012474 ENSGT00940000155678 ENSGT00950000182985.b.a.g ENSGT00950000183215.c.a.a Oncorhynchus_a ANCESTRAL SPECIES 182 ENSGT00940000155678 ENSGT00390000012474 ENSGT00940000161165.j ENSGT00390000001965 ENSGT01060000251035 ENSGT00520000055570.B.l ENSGT00940000166083.e.b ENSGT00390000016516.f.a ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00490000043329.a.b.g.b.n #36 ENSGT00940000156975.n.a #22 ENSGT00530000063834.e.b #23 ENSGT01030000234626.A.b #25 Coho salmon MODERN SPECIES 13 DDX1 (ENSOKIG00005043366) ENSOKIG00005044254 nbas (ENSOKIG00005044453) lratd1 (ENSOKIG00005047654) ENSOKIG00005047659 sec63 (ENSOKIG00005047694) ENSOKIG00005047952 ENSOKIG00005047955 ENSOKIG00005047960 OST4 (ENSOKIG00005047994) ENSOKIG00005021270 agbl5 (ENSOKIG00005021275) tmem214 (ENSOKIG00005021361) #37 MAPRE3 (ENSOKIG00005021767) #36 KIF3C (ENSOKIG00005021791) #21 RAB10 (ENSOKIG00005021828) #22 GAREM2 (ENSOKIG00005021867) #23 hadhb (ENSOKIG00005022055) #25 Oncorhynchus ANCESTRAL SPECIES 55 ENSGT00940000156248.e.b.b ENSGT00940000164948 ENSGT00950000182941.a.a.a.a ENSGT00950000182985.b.a.h ENSGT00940000161165.i ENSGT00940000155936.a.b ##8 ENSGT00940000166083.e.a ENSGT01040000240523 ENSGT00950000183107.a.a ENSGT00940000155566.w ENSGT00950000183117.b #27 ENSGT00390000016516.f.a ENSGT00490000043329.a.b.g.b.m #36 ENSGT00940000155459.x.a #17 ENSGT00940000153739.a.b.s.g #21 ENSGT00940000156975.n.b #22 ENSGT00950000182848.d.f Oncorhynchus_a DUPLICATION Oncorhynchus_a ANCESTRAL SPECIES 430 ENSGT00940000153739.a.b.s.g.b #21 ENSGT00940000156975.n.b.a #22 ENSGT00940000153739.a.b.s.g.a #21 Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 578 KIF3C (ENSOTSG00005024216) #21 rab10 (ENSOTSG00005024215) #22 ENSOTSG00005024214 #21 Chinook salmon MODERN SPECIES 16 ppifb (ENSOTSG00005004674) ZCCHC24 (ENSOTSG00005004677) ENSOTSG00005004683 ENSOTSG00005004685 KLHDC3 (ENSOTSG00005004701) ENSOTSG00005004703 ntpcr (ENSOTSG00005004707) ENSOTSG00005004710 ENSOTSG00005004711 #21 rab10 (ENSOTSG00005004713) #22 ENSOTSG00005004717 ENSOTSG00005004721 mrps6 (ENSOTSG00005004723) SLC29A1 (ENSOTSG00005004734) psap (ENSOTSG00005004901) ENSOTSG00005004951 ly6pge (ENSOTSG00005004954) ENSOTSG00005004957 zgc:65997 (ENSOTSG00005004959) pank1a (ENSOTSG00005004960) ENSOTSG00005004961 ENSOTSG00005004962 CNRIP1 (ENSOTSG00005004964) ENSOTSG00005004965 PNO1 (ENSOTSG00005004967) Coho salmon MODERN SPECIES 3 armc1l (ENSOKIG00005007864) ENSOKIG00005007821 ENSOKIG00005007810 PPP1R14C (ENSOKIG00005007794) ENSOKIG00005007781 lratd1 (ENSOKIG00005007751) ENSOKIG00005007745 ##8 runx2b (ENSOKIG00005007701) ENSOKIG00005007679 PHIP (ENSOKIG00005006050) tbx18 (ENSOKIG00005005781) selenoi (ENSOKIG00005005717) #27 ost4 (ENSOKIG00005005701) MAPRE3 (ENSOKIG00005005678) #36 KIF3C (ENSOKIG00005005638) #21 rab10 (ENSOKIG00005005622) #22 tfap2d (ENSOKIG00005005616) ENSOKIG00005005605 Oncorhynchus_a ANCESTRAL SPECIES 586 ENSGT00940000153739.a.b.s.h #21 ENSGT00940000156975.n.b.b #22 Chinook salmon MODERN SPECIES 705 ENSOTSG00005040158 #21 rab10 (ENSOTSG00005040159) #22 Rainbow trout MODERN SPECIES 25 ENSOMYG00000051781 ENSOMYG00000058171 ENSOMYG00000027107 agbl5 (ENSOMYG00000027094) ENSOMYG00000027082 #37 ENSOMYG00000055356 ENSOMYG00000027064 #36 ENSOMYG00000058542 KIF3C (ENSOMYG00000073878) #21 ENSOMYG00000048605 ENSOMYG00000031205 #22 HADHB (ENSOMYG00000027302) #25 ENSOMYG00000028429 ENSOMYG00000070443 ENSOMYG00000060066 ENSOMYG00000023485 ENSOMYG00000069780 ENSOMYG00000059897 ENSOMYG00000067714 ENSOMYG00000031152 ENSOMYG00000071150 ENSOMYG00000026864 ENSOMYG00000077259 ENSOMYG00000061905 sec63 (ENSOMYG00000068521) lratd1 (ENSOMYG00000039116) Oncorhynchus ANCESTRAL SPECIES ENSGT00940000156975.o #22 Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 29 ENSOMYG00000019693 ENSOMYG00000054045 ENSOMYG00000001421 ENSOMYG00000070205 ENSOMYG00000062251 ENSOMYG00000008565 ENSOMYG00000008519 #27 ENSOMYG00000055202 ENSOMYG00000063049 #36 ENSOMYG00000067532 DNMT3A (ENSOMYG00000008370) #17 ENSOMYG00000060536 ENSOMYG00000063999 KIF3C (ENSOMYG00000025146) #21 ENSOMYG00000053991 ENSOMYG00000028884 #22 ENSOMYG00000055531 ENSOMYG00000074883 ENSOMYG00000001347 ENSOMYG00000001320 rps12 (ENSOMYG00000001300) ENSOMYG00000050703 ENSOMYG00000008712 ENSOMYG00000074949 ENSOMYG00000008680 ENSOMYG00000073456 ENSOMYG00000065477 XKR6 (ENSOMYG00000072790) mtmr9 (ENSOMYG00000065344) ENSOMYG00000001525 sox7 (ENSOMYG00000048989) Rainbow trout MODERN SPECIES 103 ENSOMYG00000051467 ENSOMYG00000072606 #22 Salmo ANCESTRAL SPECIES 12 ENSGT00940000156248.e.b.a ENSGT00950000183215.c.a.a ENSGT00950000182985.b.a.g ENSGT00940000155678 ENSGT00390000012474 ENSGT00940000161165.j ENSGT00390000001965 ENSGT00390000004348 ENSGT00940000171406 ENSGT00520000055570.B.l ENSGT00940000166083.e.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 #37 ENSGT00940000153739.a.b.s.h #21 ENSGT00940000156975 #22 ENSGT00530000063834.e.b #23 ENSGT01030000234626.A.b #25 ENSGT00950000182848.d.e ENSGT00940000160562 ENSGT00940000156406.b River trout DUPLICATION River trout MODERN SPECIES 62 ppp1r14c (ENSSTUG00000020966) ENSSTUG00000020972 selenoi (ENSSTUG00000020990) #27 ENSSTUG00000021004 ost4 (ENSSTUG00000021015) mapre3b (ENSSTUG00000021022) #36 dnmt3aa (ENSSTUG00000021092) #17 KIF3C (ENSSTUG00000024120) #21 rab10 (ENSSTUG00000024138) #22 ENSSTUG00000024160 ENSSTUG00000024171 ENSSTUG00000024181 tfap2d (ENSSTUG00000024189) River trout MODERN SPECIES ENSSTUG00000001015 ENSSTUG00000001004 mtfr2 (ENSSTUG00000000980) ppp1r14c (ENSSTUG00000000971) lratd1 (ENSSTUG00000000963) ENSSTUG00000000958 sec63 (ENSSTUG00000000871) iyd (ENSSTUG00000000807) ENSSTUG00000000796 ENSSTUG00000000661 runx2b (ENSSTUG00000000618) ost4 (ENSSTUG00000000615) agbl5 (ENSSTUG00000000601) tmem214 (ENSSTUG00000000572) #37 KIF3C (ENSSTUG00000000496) #21 rab10 (ENSSTUG00000000486) #22 GAREM2 (ENSSTUG00000000473) #23 hadhb (ENSSTUG00000000072) #25 tfap2d (ENSSTUG00000000070) ENSSTUG00000000069 ENSSTUG00000000068 ENSSTUG00000000065 enpp5 (ENSSTUG00000000062) Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 25 ENSSSAG00000002290 ENSSSAG00000114888 ENSSSAG00000103924 ENSSSAG00000121335 #37 ENSSSAG00000110939 #21 ENSSSAG00000056949 #22 GAREM2 (ENSSSAG00000060021) #23 ENSSSAG00000002469 #25 tfap2d (ENSSSAG00000047571) ENSSSAG00000108617 ENSSSAG00000054138 ENSSSAG00000097224 ENSSSAG00000113910 ENSSSAG00000099516 ENSSSAG00000109824 ENSSSAG00000002244 ENSSSAG00000093825 ENSSSAG00000002210 sec63 (ENSSSAG00000106527) lratd1 (ENSSSAG00000116758) ENSSSAG00000049424 Atlantic salmon MODERN SPECIES 6 ENSSSAG00000111755 ENSSSAG00000048091 ENSSSAG00000002148 ENSSSAG00000111511 ##8 ENSSSAG00000117369 hmgn3 (ENSSSAG00000099936) ENSSSAG00000097093 ENSSSAG00000097427 ENSSSAG00000054711 tbx18 (ENSSSAG00000107202) selenoi (ENSSSAG00000059365) #27 ENSSSAG00000081879 #36 ENSSSAG00000112119 KIF3C (ENSSSAG00000120471) #21 ENSSSAG00000122164 #17 ENSSSAG00000085616 #22 tfap2d (ENSSSAG00000083685) ENSSSAG00000104997 adamts3 (ENSSSAG00000047659) SMARCA2 (ENSSSAG00000045598) ENSSSAG00000014321 ENSSSAG00000043060 ENSSSAG00000031294 dmrt2a (ENSSSAG00000089152) dmrt3a (ENSSSAG00000047601) ENSSSAG00000118786 ENSSSAG00000114358 fbp1a (ENSSSAG00000095867) ENSSSAG00000108551 dapk1 (ENSSSAG00000108825) ENSSSAG00000111548 Elephant shark MODERN SPECIES 1563 osr1 (ENSCMIG00000004915) ENSCMIG00000004918 ENSCMIG00000004922 ENSCMIG00000004924 OTOF (ENSCMIG00000004944) ##29 drc1 (ENSCMIG00000004992) #28 selenoi (ENSCMIG00000004999) #27 agbl5 (ENSCMIG00000005007) tmem214 (ENSCMIG00000005089) #37 ENSCMIG00000005355 #36 dpysl5a (ENSCMIG00000005360) #35 dnmt3aa (ENSCMIG00000005462) #17 dtnbb (ENSCMIG00000005805) #18 ASXL2 (ENSCMIG00000006187) #19 KIF3C (ENSCMIG00000006191) #21 rab10 (ENSCMIG00000006196) #22 GAREM2 (ENSCMIG00000006209) #23 hadhab (ENSCMIG00000006307) #24 hadhb (ENSCMIG00000006698) #25 ENSCMIG00000006739 ENSCMIG00000006740