Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Gnathostomata ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Euteleostomi ANCESTRAL SPECIES 104 ENSGT00940000159440 ENSGT00940000159004 ENSGT00530000063615.a ENSGT00940000160050 ENSGT00990000205656 ENSGT00940000159237 ENSGT00940000160088 ENSGT01030000234534.B.a.a.a.a ENSGT00940000159261 ENSGT00940000153487.b.a ENSGT00940000162053 ENSGT01030000234539.a.a.a ENSGT00940000154662 ENSGT01030000234539.a.a.b.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000156893 ENSGT00390000018360 ENSGT00390000011497 ENSGT00950000183094.a ENSGT00940000159348 ENSGT00940000161136 Sarcopterygii ANCESTRAL SPECIES 648 ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d Tetrapoda ANCESTRAL SPECIES 301 ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d Amniota ANCESTRAL SPECIES 266 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d Mammalia ANCESTRAL SPECIES 10 ENSGT00940000161883 ENSGT00940000157861 #12 ENSGT00770000120611.A #13 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000003668 #27 ENSGT00940000157807 #28 ENSGT00940000154822.b #29 ENSGT00900000141033.a #30 ENSGT00900000141033.b.a ##30 ENSGT00940000161917 #31 ENSGT00940000154929.A #32 ENSGT00940000154929.C ##32 ENSGT00940000159834 #33 ENSGT01030000234614.A #34 ENSGT00910000144278 #35 ENSGT00390000007195 #36 ENSGT00900000141071 #37 Theria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Eutheria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Boreoeutheria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Euarchontoglires ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Glires ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Rodentia ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Rodentia_B ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Myomorpha ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Muroidea ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Muroidea_A ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Cricetidae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Cricetinae ANCESTRAL SPECIES 21 ENSGT01040000240406.A.b.a.a.a.a.a.a.a.a.d.b.a.b.i ##11 ENSGT00850000133592 ENSGT00510000049544 ENSGT01040000240406.A.a #11 ENSGT00940000164268 ENSGT00940000157861 #12 ENSGT00770000120611.A #13 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000018608 #25 ENSGT00390000016476 #26 ENSGT00390000003668 #27 ENSGT00940000157807 #28 ENSGT00940000154822.b #29 ENSGT00900000141033.a #30 ENSGT00940000161917 #31 ENSGT00940000154929.A #32 ENSGT00940000159834 #33 ENSGT01030000234614.A #34 ENSGT00910000144278 #35 ENSGT00390000007195 #36 ENSGT00900000141071.f #37 Golden Hamster MODERN SPECIES 703 Reck (ENSMAUG00000002463) #7 Or13c7 (ENSMAUG00000008518) #8 Or13c7c (ENSMAUG00000008725) #9 Or13c7b (ENSMAUG00000008555) #10 Or13j1 (ENSMAUG00000009473) #11 Tmem8b (ENSMAUG00000018119) #12 Fam221b (ENSMAUG00000017909) #13 Hint2 (ENSMAUG00000008164) #14 Spag8 (ENSMAUG00000015839) #15 Npr2 (ENSMAUG00000019907) #16 Msmp (ENSMAUG00000007922) #17 Rgp1 (ENSMAUG00000004266) #18 Gba2 (ENSMAUG00000019050) #19 Creb3 (ENSMAUG00000013011) #20 Tln1 (ENSMAUG00000003449) #21 Tpm2 (ENSMAUG00000020777) #22 Car9 (ENSMAUG00000008794) #23 Arhgef39 (ENSMAUG00000018293) #24 Ccdc107 (ENSMAUG00000021012) #25 Sit1 (ENSMAUG00000015412) #26 Cd72 (ENSMAUG00000019376) #27 Tesk1 (ENSMAUG00000010105) #28 Fam166b (ENSMAUG00000012187) #29 Rusc2 (ENSMAUG00000013885) #30 Atp8b5 (ENSMAUG00000017194) #31 ENSMAUG00000015941 #32 Atosb (ENSMAUG00000022204) #33 Stoml2 (ENSMAUG00000001356) #34 Pigo (ENSMAUG00000018188) #35 Fancg (ENSMAUG00000013616) #36 Vcp (ENSMAUG00000001185) #37 Chinese hamster chok1gshd MODERN SPECIES 111 Or13c7d (ENSCGRG00001004670) ##11 Spaar (ENSCGRG00001003061) Hrct1 (ENSCGRG00001004997) Or13j1 (ENSCGRG00001004497) #11 Or13e8 (ENSCGRG00001003201) Tmem8b (ENSCGRG00001015077) #12 Fam221b (ENSCGRG00001021843) #13 Hint2 (ENSCGRG00001022361) #14 ENSCGRG00001023642 #15 Npr2 (ENSCGRG00001002437) #16 Rgp1 (ENSCGRG00001013071) #18 Msmp (ENSCGRG00001018637) #17 Gba2 (ENSCGRG00001019184) #19 ENSCGRG00001019579 #20 Tln1 (ENSCGRG00001022418) #21 Tpm2 (ENSCGRG00001005345) #22 Car9 (ENSCGRG00001021639) #23 Arhgef39 (ENSCGRG00001021996) #24 Ccdc107 (ENSCGRG00001022872) #25 Sit1 (ENSCGRG00001002139) #26 Cd72 (ENSCGRG00001008526) #27 Tesk1 (ENSCGRG00001014228) #28 Fam166b (ENSCGRG00001015832) #29 Rusc2 (ENSCGRG00001018663) #30 Atp8b5 (ENSCGRG00001015799) #31 Unc13b (ENSCGRG00001013114) #32 ENSCGRG00001024670 Atosb (ENSCGRG00001024781) #33 Stoml2 (ENSCGRG00001011342) #34 Pigo (ENSCGRG00001012278) #35 Fancg (ENSCGRG00001020211) #36 Murinae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Rat MODERN SPECIES 11 Chmp4c (ENSRNOG00000010238) Slc10a5 (ENSRNOG00000067758) Zfand1 (ENSRNOG00000010342) Impa1 (ENSRNOG00000010482) Fabp12 (ENSRNOG00000038825) Fabp4 (ENSRNOG00000010805) Fabp9 (ENSRNOG00000011082) Pmp2 (ENSRNOG00000022707) Fabp5 (ENSRNOG00000049075) Pag1 (ENSRNOG00000061328) Zfp704 (ENSRNOG00000054426) Zbtb10 (ENSRNOG00000061862) Tpd52 (ENSRNOG00000011441) Mrps28 (ENSRNOG00000032630) ENSRNOG00000033449 ENSRNOG00000066004 #22 Hey1 (ENSRNOG00000062882) Stmn2 (ENSRNOG00000011705) LOC100360846 (ENSRNOG00000011827) Il7 (ENSRNOG00000011973) Zc2hc1a (ENSRNOG00000022356) Pkia (ENSRNOG00000012095) ENSRNOG00000066927 ENSRNOG00000062390 Senp5-ps1 (ENSRNOG00000068362) Pex2 (ENSRNOG00000008748) Zfhx4 (ENSRNOG00000008765) Hnf4g (ENSRNOG00000008971) Ythdf3 (ENSRNOG00000010084) ENSRNOG00000064597 ENSRNOG00000064316 Mus ANCESTRAL SPECIES 3 ENSGT00850000133592 ENSGT00510000049544 ENSGT01040000240406.A.a #11 ENSGT00940000164268 ENSGT00940000157861 #12 ENSGT00770000120611.A #13 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT01100000267037 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT01030000234542.b.b.a.b ##22 ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000018608 #25 ENSGT00390000016476 #26 ENSGT00390000003668 #27 ENSGT00940000157807 #28 ENSGT00940000154822.b #29 ENSGT00900000141033.a #30 ENSGT00940000161917 #31 ENSGT00940000154929.A #32 ENSGT00940000159834 #33 ENSGT01030000234614.A #34 ENSGT00910000144278 #35 ENSGT00390000007195 #36 Mus_A ANCESTRAL SPECIES 3 ENSGT00850000133592 ENSGT00510000049544 ENSGT01040000240406.A.a #11 ENSGT00940000164268 ENSGT00940000157861 #12 ENSGT00770000120611.A #13 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT01100000267037 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT01030000234542.b.b.a.b ##22 ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000018608 #25 ENSGT00390000016476 #26 ENSGT00390000003668 #27 ENSGT00940000157807 #28 ENSGT00940000154822.b #29 ENSGT00900000141033.a #30 ENSGT00940000161917 #31 ENSGT00940000154929.A #32 ENSGT00940000159834 #33 ENSGT01030000234614.A #34 ENSGT00910000144278 #35 ENSGT00390000007195 #36 Mus_B ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Mus_C ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 spretus MODERN SPECIES 13 Hrct1 (MGP_SPRETEiJ_G0026914) Or13j1 (MGP_SPRETEiJ_G0026913) #11 Or13e8 (MGP_SPRETEiJ_G0026912) Tmem8b (MGP_SPRETEiJ_G0026911) #12 Fam221b (MGP_SPRETEiJ_G0026910) #13 Hint2 (MGP_SPRETEiJ_G0026909) #14 Spag8 (MGP_SPRETEiJ_G0026908) #15 Npr2 (MGP_SPRETEiJ_G0026907) #16 Msmp (MGP_SPRETEiJ_G0026906) #17 Rgp1 (MGP_SPRETEiJ_G0026905) #18 Gba2 (MGP_SPRETEiJ_G0026904) #19 Creb3 (MGP_SPRETEiJ_G0026903) #20 Tln1 (MGP_SPRETEiJ_G0026902) #21 Arhgef39 (MGP_SPRETEiJ_G0026901) #24 Ccdc107 (MGP_SPRETEiJ_G0026900) #25 Tpm2 (MGP_SPRETEiJ_G0026899) #22 Sit1 (MGP_SPRETEiJ_G0026897) #26 Cd72 (MGP_SPRETEiJ_G0026896) #27 Tesk1 (MGP_SPRETEiJ_G0026895) #28 MGP_SPRETEiJ_G0026894 #29 Rusc2 (MGP_SPRETEiJ_G0026893) #30 Atp8b5 (MGP_SPRETEiJ_G0026892) #31 MGP_SPRETEiJ_G0026891 #32 Atosb (MGP_SPRETEiJ_G0026890) #33 Stoml2 (MGP_SPRETEiJ_G0026889) #34 Pigo (MGP_SPRETEiJ_G0026888) #35 Fancg (MGP_SPRETEiJ_G0026887) #36 Vcp (MGP_SPRETEiJ_G0026886) #37 1700022I11Rik (MGP_SPRETEiJ_G0026885) Dnajb5 (MGP_SPRETEiJ_G0026884) Phf24 (MGP_SPRETEiJ_G0026883) Mouse MODERN SPECIES 13 Or13c7d (ENSMUSG00000044801) ##11 Spaar (ENSMUSG00000028475) Hrct1 (ENSMUSG00000071001) Or13j1 (ENSMUSG00000046450) #11 Or13e8 (ENSMUSG00000050215) Tmem8b (ENSMUSG00000078716) #12 Fam221b (ENSMUSG00000043633) #13 Hint2 (ENSMUSG00000028470) #14 Spag8 (ENSMUSG00000066196) #15 Npr2 (ENSMUSG00000028469) #16 Msmp (ENSMUSG00000078719) #17 Rgp1 (ENSMUSG00000028468) #18 Gba2 (ENSMUSG00000028467) #19 Creb3 (ENSMUSG00000028466) #20 Tln1 (ENSMUSG00000028465) #21 Tpm2 (ENSMUSG00000028464) #22 Car9 (ENSMUSG00000028463) #23 Arhgef39 (ENSMUSG00000051517) #24 Ccdc107 (ENSMUSG00000028461) #25 Sit1 (ENSMUSG00000028460) #26 Cd72 (ENSMUSG00000028459) #27 Tesk1 (ENSMUSG00000028458) #28 Fam166b (ENSMUSG00000042788) #29 Rusc2 (ENSMUSG00000035969) #30 Atp8b5 (ENSMUSG00000028457) #31 Unc13b (ENSMUSG00000028456) #32 Atosb (ENSMUSG00000036002) #33 Stoml2 (ENSMUSG00000028455) #34 Pigo (ENSMUSG00000028454) #35 Fancg (ENSMUSG00000028453) #36 Vcp (ENSMUSG00000028452) #37 Ryukyu mouse MODERN SPECIES 13 Or13c7 (MGP_CAROLIEiJ_G0025955) #8 MGP_CAROLIEiJ_G0025954 #9 Hrct1 (MGP_CAROLIEiJ_G0025953) Or13j1 (MGP_CAROLIEiJ_G0025952) #11 Or13e8 (MGP_CAROLIEiJ_G0025951) Tmem8b (MGP_CAROLIEiJ_G0025950) #12 Fam221b (MGP_CAROLIEiJ_G0025949) #13 Hint2 (MGP_CAROLIEiJ_G0025948) #14 Spag8 (MGP_CAROLIEiJ_G0025947) #15 Npr2 (MGP_CAROLIEiJ_G0025946) #16 Msmp (MGP_CAROLIEiJ_G0025945) #17 Rgp1 (MGP_CAROLIEiJ_G0025944) #18 Gba2 (MGP_CAROLIEiJ_G0025943) #19 Creb3 (MGP_CAROLIEiJ_G0025942) #20 Tln1 (MGP_CAROLIEiJ_G0025941) #21 Tpm2 (MGP_CAROLIEiJ_G0025940) #22 Car9 (MGP_CAROLIEiJ_G0025939) #23 Arhgef39 (MGP_CAROLIEiJ_G0025938) #24 Ccdc107 (MGP_CAROLIEiJ_G0025937) #25 Sit1 (MGP_CAROLIEiJ_G0025936) #26 Cd72 (MGP_CAROLIEiJ_G0025935) #27 Tesk1 (MGP_CAROLIEiJ_G0025934) #28 MGP_CAROLIEiJ_G0025933 #29 Rusc2 (MGP_CAROLIEiJ_G0025932) #30 Atp8b5 (MGP_CAROLIEiJ_G0025931) #31 MGP_CAROLIEiJ_G0025930 #32 Atosb (MGP_CAROLIEiJ_G0025929) #33 Stoml2 (MGP_CAROLIEiJ_G0025928) #34 Pigo (MGP_CAROLIEiJ_G0025927) #35 Fancg (MGP_CAROLIEiJ_G0025926) #36 Vcp (MGP_CAROLIEiJ_G0025925) #37 Shrew mouse MODERN SPECIES 14 Or13c7b (MGP_PahariEiJ_G0024100) #10 Or13c7d (MGP_PahariEiJ_G0024099) ##11 Hrct1 (MGP_PahariEiJ_G0024098) Or13j1 (MGP_PahariEiJ_G0024097) #11 Or13e8 (MGP_PahariEiJ_G0024096) Tmem8b (MGP_PahariEiJ_G0024095) #12 Fam221b (MGP_PahariEiJ_G0024094) #13 Hint2 (MGP_PahariEiJ_G0024093) #14 MGP_PahariEiJ_G0024092 #15 Npr2 (MGP_PahariEiJ_G0024091) #16 Msmp (MGP_PahariEiJ_G0024090) #17 Rgp1 (MGP_PahariEiJ_G0024089) #18 Gba2 (MGP_PahariEiJ_G0024088) #19 Creb3 (MGP_PahariEiJ_G0024087) #20 Tln1 (MGP_PahariEiJ_G0024086) #21 Tpm2 (MGP_PahariEiJ_G0024085) #22 Car9 (MGP_PahariEiJ_G0024084) #23 Arhgef39 (MGP_PahariEiJ_G0024083) #24 Ccdc107 (MGP_PahariEiJ_G0024082) #25 Sit1 (MGP_PahariEiJ_G0024081) #26 MGP_PahariEiJ_G0024080 #27 Tesk1 (MGP_PahariEiJ_G0024079) #28 MGP_PahariEiJ_G0024078 #29 Rusc2 (MGP_PahariEiJ_G0024077) #30 Atp8b5 (MGP_PahariEiJ_G0024076) #31 MGP_PahariEiJ_G0024075 #32 Atosb (MGP_PahariEiJ_G0024074) #33 Stoml2 (MGP_PahariEiJ_G0024073) #34 Pigo (MGP_PahariEiJ_G0024072) #35 Fancg (MGP_PahariEiJ_G0024071) #36 Vcp (MGP_PahariEiJ_G0024070) #37 Upper Galilee mountains blind mole rat MODERN SPECIES 1193 Hrct1 (ENSNGAG00000018817) Or13j1 (ENSNGAG00000020703) #11 Or13e8 (ENSNGAG00000021114) ENSNGAG00000001233 #12 Hint2 (ENSNGAG00000003065) #14 Spag8 (ENSNGAG00000009517) #15 Npr2 (ENSNGAG00000012144) #16 Msmp (ENSNGAG00000000253) #17 Rgp1 (ENSNGAG00000001512) #18 Gba2 (ENSNGAG00000015334) #19 Creb3 (ENSNGAG00000020484) #20 Tln1 (ENSNGAG00000004118) #21 Tpm2 (ENSNGAG00000009787) #22 Car9 (ENSNGAG00000010790) #23 Arhgef39 (ENSNGAG00000012924) #24 Ccdc107 (ENSNGAG00000017156) #25 Sit1 (ENSNGAG00000020498) #26 Cd72 (ENSNGAG00000000679) #27 Tesk1 (ENSNGAG00000017508) #28 ENSNGAG00000010058 #29 Rusc2 (ENSNGAG00000012485) #30 ENSNGAG00000008794 #32 Atosb (ENSNGAG00000020349) #33 Stoml2 (ENSNGAG00000021085) #34 Pigo (ENSNGAG00000000757) #35 Fancg (ENSNGAG00000000885) #36 Vcp (ENSNGAG00000012998) #37 1700022I11Rik (ENSNGAG00000005829) Kangaroo rat MODERN SPECIES 414 Ccin (ENSDORG00000012835) ENSDORG00000012831 Reck (ENSDORG00000012827) #7 Or13c7c (ENSDORG00000026683) #9 ENSDORG00000015734 #8 Hrct1 (ENSDORG00000029256) Or13j1 (ENSDORG00000006274) #11 ENSDORG00000006271 #12 Hint2 (ENSDORG00000006268) #14 Npr2 (ENSDORG00000006262) #16 Msmp (ENSDORG00000025071) #17 Rgp1 (ENSDORG00000006258) #18 Gba2 (ENSDORG00000006257) #19 Creb3 (ENSDORG00000029821) #20 Tln1 (ENSDORG00000006249) #21 Tpm2 (ENSDORG00000006246) #22 Car9 (ENSDORG00000014587) #23 Arhgef39 (ENSDORG00000014585) #24 Ccdc107 (ENSDORG00000014582) #25 Sit1 (ENSDORG00000029675) #26 ENSDORG00000014579 #27 Tesk1 (ENSDORG00000014578) #28 ENSDORG00000014577 #29 Rusc2 (ENSDORG00000014573) #30 Atp8b5 (ENSDORG00000027358) #31 ENSDORG00000016518 #32 Atosb (ENSDORG00000010303) #33 Stoml2 (ENSDORG00000010302) #34 Pigo (ENSDORG00000010301) #35 Fancg (ENSDORG00000019859) #36 Vcp (ENSDORG00000010299) #37 Rodentia_A ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Sciuridae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Marmotini ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Marmotini_b ANCESTRAL SPECIES 2 ENSGT00850000133592 ENSGT00510000049544 ENSGT00960000190987 ENSGT01040000240406.A.a #11 ENSGT00940000164268 ENSGT00940000157861 #12 ENSGT00770000120611.A #13 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT01030000234542.b.b.a.b ##22 ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000018608 #25 ENSGT00390000016476 #26 ENSGT00390000003668 #27 ENSGT00940000157807 #28 ENSGT00940000154822.b #29 ENSGT00900000141033.a #30 ENSGT00940000161917 #31 ENSGT00940000154929.A #32 ENSGT00940000159834 #33 ENSGT01030000234614.A #34 ENSGT00910000144278 #35 ENSGT00390000007195 #36 Squirrel MODERN SPECIES 124 ENSSTOG00000027055 #10 ENSSTOG00000022728 ##11 HRCT1 (ENSSTOG00000029426) OR13J1 (ENSSTOG00000019968) #11 ENSSTOG00000007067 TMEM8B (ENSSTOG00000007004) #12 FAM221B (ENSSTOG00000026697) #13 HINT2 (ENSSTOG00000006975) #14 SPAG8 (ENSSTOG00000031721) #15 NPR2 (ENSSTOG00000006885) #16 MSMP (ENSSTOG00000019953) #17 RGP1 (ENSSTOG00000005260) #18 GBA2 (ENSSTOG00000005223) #19 CREB3 (ENSSTOG00000005203) #20 TLN1 (ENSSTOG00000005092) #21 ENSSTOG00000005060 #22 CA9 (ENSSTOG00000005040) #23 ARHGEF39 (ENSSTOG00000005023) #24 CCDC107 (ENSSTOG00000005005) #25 SIT1 (ENSSTOG00000021283) #26 CD72 (ENSSTOG00000028460) #27 TESK1 (ENSSTOG00000022193) #28 FAM166B (ENSSTOG00000028838) #29 RUSC2 (ENSSTOG00000005996) #30 ENSSTOG00000019584 #31 ENSSTOG00000001641 #32 ATOSB (ENSSTOG00000015239) #33 STOML2 (ENSSTOG00000015225) #34 PIGO (ENSSTOG00000015210) #35 FANCG (ENSSTOG00000015194) #36 VCP (ENSSTOG00000015181) #37 Hystricomorpha ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Naked mole-rat female MODERN SPECIES 3 ENSHGLG00000040072 ENSHGLG00000001113 ENSHGLG00000021263 #11 TMEM8B (ENSHGLG00000019082) #12 FAM221B (ENSHGLG00000050266) #13 HINT2 (ENSHGLG00000047552) #14 ENSHGLG00000018211 #15 NPR2 (ENSHGLG00000018381) #16 ENSHGLG00000021386 MSMP (ENSHGLG00000033552) #17 RGP1 (ENSHGLG00000003062) #18 GBA2 (ENSHGLG00000005313) #19 CREB3 (ENSHGLG00000018724) #20 TLN1 (ENSHGLG00000018401) #21 ENSHGLG00000020017 ENSHGLG00000005363 #22 CA9 (ENSHGLG00000044546) #23 ARHGEF39 (ENSHGLG00000019101) #24 SIT1 (ENSHGLG00000041192) #26 CD72 (ENSHGLG00000003067) #27 TESK1 (ENSHGLG00000004902) #28 ENSHGLG00000036182 RUSC2 (ENSHGLG00000000643) #30 ENSHGLG00000001499 #31 ENSHGLG00000036725 ENSHGLG00000003611 #32 ENSHGLG00000036099 ATOSB (ENSHGLG00000002143) #33 STOML2 (ENSHGLG00000002045) #34 PIGO (ENSHGLG00000000517) #35 FANCG (ENSHGLG00000011031) #36 Hystricomorpha_a ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Degu MODERN SPECIES 134 ENSODEG00000014331 HRAS (ENSODEG00000015703) RNH1 (ENSODEG00000014320) PTDSS2 (ENSODEG00000014250) ANO9 (ENSODEG00000014087) SIGIRR (ENSODEG00000014794) PKP3 (ENSODEG00000014948) B4GALNT4 (ENSODEG00000015497) ENSODEG00000014892 ENSODEG00000014441 IFITM5 (ENSODEG00000014917) PGGHG (ENSODEG00000015256) NLRP6 (ENSODEG00000014679) ENSODEG00000013804 PSMD13 (ENSODEG00000015037) ENSODEG00000014097 #22 SIRT3 (ENSODEG00000014136) RIC8A (ENSODEG00000015235) BET1L (ENSODEG00000013826) ODF3 (ENSODEG00000015176) ENSODEG00000014059 ENSODEG00000020278 PTCHD3 (ENSODEG00000014626) OR9K2 (ENSODEG00000014841) ENSODEG00000013814 ENSODEG00000015024 NEUROD4 (ENSODEG00000020179) TESPA1 (ENSODEG00000014898) ENSODEG00000013533 PPP1R1A (ENSODEG00000013950) PDE1B (ENSODEG00000013509) Guinea pig MODERN SPECIES 27 ENSCPOG00000031231 #9 ENSCPOG00000030507 #8 ENSCPOG00000015207 #8 OR13J1 (ENSCPOG00000006373) #11 ENSCPOG00000022117 TMEM8B (ENSCPOG00000024197) #12 FAM221B (ENSCPOG00000022477) #13 HINT2 (ENSCPOG00000040327) #14 ENSCPOG00000034450 #15 NPR2 (ENSCPOG00000000414) #16 MSMP (ENSCPOG00000030922) #17 RGP1 (ENSCPOG00000000412) #18 GBA2 (ENSCPOG00000000410) #19 CREB3 (ENSCPOG00000000409) #20 TLN1 (ENSCPOG00000000403) #21 ENSCPOG00000000401 #22 CA9 (ENSCPOG00000000400) #23 ARHGEF39 (ENSCPOG00000000398) #24 CCDC107 (ENSCPOG00000000396) #25 SIT1 (ENSCPOG00000031973) #26 CD72 (ENSCPOG00000033224) #27 TESK1 (ENSCPOG00000001230) #28 ENSCPOG00000008741 #30 ENSCPOG00000033272 ##30 ENSCPOG00000006017 #31 ENSCPOG00000012048 #32 ATOSB (ENSCPOG00000012040) #33 STOML2 (ENSCPOG00000012035) #34 PIGO (ENSCPOG00000012015) #35 FANCG (ENSCPOG00000012007) #36 VCP (ENSCPOG00000011991) #37 Primates ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Strepsirrhini ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Lemuriformes ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Mouse lemur MODERN SPECIES 22 ENSMICG00000038351 ENSMICG00000043092 SPESP1 (ENSMICG00000045479) GLCE (ENSMICG00000044587) PAQR5 (ENSMICG00000012222) KIF23 (ENSMICG00000012227) RPLP1 (ENSMICG00000036579) TLE3 (ENSMICG00000002321) UACA (ENSMICG00000034701) LARP6 (ENSMICG00000011234) LRRC49 (ENSMICG00000011247) THAP10 (ENSMICG00000030210) THSD4 (ENSMICG00000033528) NR2E3 (ENSMICG00000038667) MYO9A (ENSMICG00000000971) ENSMICG00000030629 #22 GRAMD2A (ENSMICG00000041898) PKM (ENSMICG00000013532) PARP6 (ENSMICG00000013544) CELF6 (ENSMICG00000027918) ENSMICG00000036904 HEXA (ENSMICG00000013561) ENSMICG00000027129 ARIH1 (ENSMICG00000012070) ENSMICG00000038537 BBS4 (ENSMICG00000032120) ENSMICG00000030696 ADPGK (ENSMICG00000015028) NEO1 (ENSMICG00000012371) HCN4 (ENSMICG00000007449) REC114 (ENSMICG00000014616) Haplorrhini ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Simiiformes ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Catarrhini ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Hominoidea ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Gibbon MODERN SPECIES 11 ENSNLEG00000018628 ENSNLEG00000005166 LCP2 (ENSNLEG00000005113) ENSNLEG00000005110 ENSNLEG00000032677 FOXI1 (ENSNLEG00000005109) DOCK2 (ENSNLEG00000004980) INSYN2B (ENSNLEG00000005107) SPDL1 (ENSNLEG00000004947) SLIT3 (ENSNLEG00000004908) PANK3 (ENSNLEG00000004896) FBLL1 (ENSNLEG00000031565) RARS1 (ENSNLEG00000004848) WWC1 (ENSNLEG00000026584) TENM2 (ENSNLEG00000004813) ENSNLEG00000035676 #22 MAT2B (ENSNLEG00000004785) HMMR (ENSNLEG00000004676) ENSNLEG00000004674 CCNG1 (ENSNLEG00000004641) GABRG2 (ENSNLEG00000004597) GABRA1 (ENSNLEG00000004541) GABRA6 (ENSNLEG00000004518) GABRB2 (ENSNLEG00000004479) ATP10B (ENSNLEG00000004434) PTTG1 (ENSNLEG00000004396) SLU7 (ENSNLEG00000004355) FAM200C (ENSNLEG00000018765) C1QTNF2 (ENSNLEG00000031564) ENSNLEG00000032973 CCNJL (ENSNLEG00000004343) Cercopithecidae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Cercopithecinae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Vervet Monkey MODERN SPECIES 3 ENSCSAG00000000454 ##11 ENSCSAG00000000453 ##11 OR2S2 (ENSCSAG00000000452) ##11 HRCT1 (ENSCSAG00000000451) OR13J1 (ENSCSAG00000000450) #11 TMEM8B (ENSCSAG00000010650) #12 FAM221B (ENSCSAG00000010633) #13 HINT2 (ENSCSAG00000010622) #14 SPAG8 (ENSCSAG00000010595) #15 NPR2 (ENSCSAG00000010612) #16 MSMP (ENSCSAG00000010584) #17 RGP1 (ENSCSAG00000010580) #18 GBA2 (ENSCSAG00000010566) #19 CREB3 (ENSCSAG00000010554) #20 TLN1 (ENSCSAG00000010542) #21 ENSCSAG00000010498 #22 CA9 (ENSCSAG00000010447) #23 ARHGEF39 (ENSCSAG00000010393) #24 CCDC107 (ENSCSAG00000010389) #25 SIT1 (ENSCSAG00000010386) #26 CD72 (ENSCSAG00000010375) #27 TESK1 (ENSCSAG00000010363) #28 RUSC2 (ENSCSAG00000010356) #30 FAM166B (ENSCSAG00000010348) #29 ENSCSAG00000010330 #32 ENSCSAG00000010310 ATOSB (ENSCSAG00000010301) #33 STOML2 (ENSCSAG00000010292) #34 PIGO (ENSCSAG00000010287) #35 FANCG (ENSCSAG00000010273) #36 VCP (ENSCSAG00000010257) #37 Cercopithecinae_a ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Macaca ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Pig-tailed macaque MODERN SPECIES 566 C5orf58 (ENSMNEG00000045509) FOXI1 (ENSMNEG00000019116) INSYN2B (ENSMNEG00000038181) DOCK2 (ENSMNEG00000028317) SPDL1 (ENSMNEG00000040206) SLIT3 (ENSMNEG00000036017) PANK3 (ENSMNEG00000040137) RARS1 (ENSMNEG00000044708) ENSMNEG00000038297 WWC1 (ENSMNEG00000027736) TENM2 (ENSMNEG00000030074) ENSMNEG00000016038 ENSMNEG00000029204 ENSMNEG00000001722 ENSMNEG00000030988 ENSMNEG00000031403 #22 ENSMNEG00000031639 HMMR (ENSMNEG00000033353) NUDCD2 (ENSMNEG00000030247) CCNG1 (ENSMNEG00000036722) ENSMNEG00000041169 GABRG2 (ENSMNEG00000028600) GABRA1 (ENSMNEG00000039407) GABRA6 (ENSMNEG00000043018) GABRB2 (ENSMNEG00000029340) ENSMNEG00000024049 ENSMNEG00000012988 Macaca_a ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Rhesus MODERN SPECIES 6 RECK (ENSMMUG00000022613) #7 OR2S2 (ENSMMUG00000050498) ##11 SPAAR (ENSMMUG00000051938) HRCT1 (ENSMMUG00000016342) OR13J1 (ENSMMUG00000062401) #11 TMEM8B (ENSMMUG00000031865) #12 FAM221B (ENSMMUG00000031861) #13 HINT2 (ENSMMUG00000016337) #14 SPAG8 (ENSMMUG00000016336) #15 NPR2 (ENSMMUG00000016334) #16 MSMP (ENSMMUG00000056937) #17 RGP1 (ENSMMUG00000059406) #18 GBA2 (ENSMMUG00000016331) #19 CREB3 (ENSMMUG00000016328) #20 TLN1 (ENSMMUG00000031856) #21 TPM2 (ENSMMUG00000016321) #22 CA9 (ENSMMUG00000050822) #23 ARHGEF39 (ENSMMUG00000016323) #24 CCDC107 (ENSMMUG00000016327) #25 SIT1 (ENSMMUG00000063329) #26 CD72 (ENSMMUG00000016318) #27 TESK1 (ENSMMUG00000016316) #28 ENSMMUG00000049863 FAM166B (ENSMMUG00000016314) #29 RUSC2 (ENSMMUG00000016313) #30 UNC13B (ENSMMUG00000016308) #32 ATOSB (ENSMMUG00000011862) #33 STOML2 (ENSMMUG00000059191) #34 PIGO (ENSMMUG00000011866) #35 VCP (ENSMMUG00000020190) #37 ENSMMUG00000061896 Laurasiatheria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Artiodactyla ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Suina ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Chacoan peccary MODERN SPECIES 887 ENSCWAG00000003829 ##11 OR2S2 (ENSCWAG00000003839) ##11 SPAAR (ENSCWAG00000003846) HRCT1 (ENSCWAG00000003864) ENSCWAG00000003872 #11 TMEM8B (ENSCWAG00000003887) #12 FAM221B (ENSCWAG00000003953) #13 HINT2 (ENSCWAG00000003988) #14 SPAG8 (ENSCWAG00000004016) #15 NPR2 (ENSCWAG00000004081) #16 MSMP (ENSCWAG00000004164) #17 RGP1 (ENSCWAG00000004191) #18 GBA2 (ENSCWAG00000004224) #19 CREB3 (ENSCWAG00000004257) #20 TLN1 (ENSCWAG00000004325) #21 ENSCWAG00000004599 #22 CA9 (ENSCWAG00000004676) #23 ARHGEF39 (ENSCWAG00000004746) #24 CCDC107 (ENSCWAG00000004786) #25 SIT1 (ENSCWAG00000004829) #26 CD72 (ENSCWAG00000004876) #27 TESK1 (ENSCWAG00000005115) #28 FAM166B (ENSCWAG00000005165) #29 RUSC2 (ENSCWAG00000005202) #30 ENSCWAG00000005344 #31 UNC13B (ENSCWAG00000006440) #32 ATOSB (ENSCWAG00000010237) #33 STOML2 (ENSCWAG00000010297) #34 PIGO (ENSCWAG00000010488) #35 FANCG (ENSCWAG00000010604) #36 VCP (ENSCWAG00000010708) #37 Artiodactyla_a ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Artiodactyla_b ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Cetacea ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Blue whale MODERN SPECIES 11 ENSBMSG00010008236 ATP10A (ENSBMSG00010008266) UBE3A (ENSBMSG00010008323) SNRPN (ENSBMSG00010008520) NDN (ENSBMSG00010008546) MAGEL2 (ENSBMSG00010008554) ENSBMSG00010008562 CHRNA7 (ENSBMSG00010008603) ENSBMSG00010008876 ENSBMSG00010008883 OTUD7A (ENSBMSG00010013492) TBC1D2B (ENSBMSG00010013515) SH2D7 (ENSBMSG00010013535) CIB2 (ENSBMSG00010013559) IDH3A (ENSBMSG00010013586) ENSBMSG00010013604 #22 ACSBG1 (ENSBMSG00010013627) DNAJA4 (ENSBMSG00010013663) SKIC8 (ENSBMSG00010013689) CRABP1 (ENSBMSG00010013720) ENSBMSG00010013743 ENSBMSG00010013727 HYKK (ENSBMSG00010013756) PSMA4 (ENSBMSG00010013787) CHRNA5 (ENSBMSG00010013809) CHRNA3 (ENSBMSG00010013851) CHRNB4 (ENSBMSG00010013876) ENSBMSG00010013899 ENSBMSG00010013916 UBE2Q2 (ENSBMSG00010013962) ENSBMSG00010014136 Odontoceti ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Odontoceti_a ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Odontoceti_b ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Monodontidae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Narwhal MODERN SPECIES 312 ENSMMNG00015012421 ##11 ENSMMNG00015012407 ##11 OR2S2 (ENSMMNG00015012394) ##11 HRCT1 (ENSMMNG00015012373) ENSMMNG00015012329 TMEM8B (ENSMMNG00015012291) #12 FAM221B (ENSMMNG00015012262) #13 ENSMMNG00015012242 #14 SPAG8 (ENSMMNG00015012211) #15 NPR2 (ENSMMNG00015012171) #16 MSMP (ENSMMNG00015012146) #17 RGP1 (ENSMMNG00015012131) #18 GBA2 (ENSMMNG00015012088) #19 CREB3 (ENSMMNG00015018570) #20 TLN1 (ENSMMNG00015018382) #21 ENSMMNG00015018288 #22 CA9 (ENSMMNG00015018245) #23 ARHGEF39 (ENSMMNG00015018204) #24 CCDC107 (ENSMMNG00015018152) #25 SIT1 (ENSMMNG00015018130) #26 CD72 (ENSMMNG00015018062) #27 TESK1 (ENSMMNG00015018015) #28 FAM166B (ENSMMNG00015017991) #29 RUSC2 (ENSMMNG00015017947) #30 ENSMMNG00015017888 #31 UNC13B (ENSMMNG00015017219) #32 ATOSB (ENSMMNG00015016981) #33 STOML2 (ENSMMNG00015016899) #34 PIGO (ENSMMNG00015016828) #35 FANCG (ENSMMNG00015016755) #36 VCP (ENSMMNG00015016650) #37 Beluga whale MODERN SPECIES 20 CHRNA7 (ENSDLEG00000001573) ENSDLEG00000001570 OTUD7A (ENSDLEG00000001539) ADAMTS7 (ENSDLEG00000000889) TBC1D2B (ENSDLEG00000000680) SH2D7 (ENSDLEG00000000658) CIB2 (ENSDLEG00000000640) ENSDLEG00000000623 #22 IDH3A (ENSDLEG00000000589) ACSBG1 (ENSDLEG00000000531) DNAJA4 (ENSDLEG00000000487) WDR61 (ENSDLEG00000000464) CRABP1 (ENSDLEG00000000441) IREB2 (ENSDLEG00000000397) HYKK (ENSDLEG00000000362) PSMA4 (ENSDLEG00000000329) CHRNA5 (ENSDLEG00000000246) CHRNA3 (ENSDLEG00000000140) CHRNB4 (ENSDLEG00000004654) UBE2Q2 (ENSDLEG00000004624) FBXO22 (ENSDLEG00000004615) NRG4 (ENSDLEG00000004607) TMEM266 (ENSDLEG00000004600) Pecora DUPLICATION Pecora ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.g #22 Percora_a ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.g #22 Bovidae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.g #22 Caprinae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.g #22 Goat MODERN SPECIES 4 BANF2 (ENSCHIG00000008802) SNX5 (ENSCHIG00000017948) MGME1 (ENSCHIG00000008100) OVOL2 (ENSCHIG00000019495) PET117 (ENSCHIG00000008463) KAT14 (ENSCHIG00000023963) ENSCHIG00000015086 DZANK1 (ENSCHIG00000023950) POLR3F (ENSCHIG00000014743) RBBP9 (ENSCHIG00000024182) SEC23B (ENSCHIG00000016382) ENSCHIG00000024743 SCP2D1 (ENSCHIG00000007792) SLC24A3 (ENSCHIG00000010684) ENSCHIG00000008840 ENSCHIG00000020114 #22 RIN2 (ENSCHIG00000009997) NAA20 (ENSCHIG00000021922) CRNKL1 (ENSCHIG00000013171) CFAP61 (ENSCHIG00000022048) INSM1 (ENSCHIG00000002944) RALGAPA2 (ENSCHIG00000023081) ENSCHIG00000005268 ENSCHIG00000001410 KIZ (ENSCHIG00000020496) XRN2 (ENSCHIG00000006921) ENSCHIG00000009213 NKX2-4 (ENSCHIG00000017092) NKX2-2 (ENSCHIG00000025252) PAX1 (ENSCHIG00000025250) FOXA2 (ENSCHIG00000013879) Pecora DUPLICATION Pecora ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.h.a #22 Percora_a ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.h.a #22 Bovidae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.h.a #22 Bovinae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.h.a #22 Bos ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.h.a #22 Bos_b ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.h.a #22 Cow MODERN SPECIES 27 OR13J1 (ENSBTAG00000053868) #11 OR13J1F (ENSBTAG00000048744) #11 OR13J1C (ENSBTAG00000052220) #11 OR13E10 (ENSBTAG00000052564) OR13E1 (ENSBTAG00000053732) TMEM8B (ENSBTAG00000011445) #12 FAM221B (ENSBTAG00000005222) #13 HINT2 (ENSBTAG00000011444) #14 SPAG8 (ENSBTAG00000011442) #15 NPR2 (ENSBTAG00000011434) #16 MSMP (ENSBTAG00000038777) #17 RGP1 (ENSBTAG00000011433) #18 GBA2 (ENSBTAG00000011431) #19 CREB3 (ENSBTAG00000011429) #20 TLN1 (ENSBTAG00000025868) #21 TPM2 (ENSBTAG00000011424) #22 CA9 (ENSBTAG00000011420) #23 ARHGEF39 (ENSBTAG00000011416) #24 CCDC107 (ENSBTAG00000011413) #25 SIT1 (ENSBTAG00000011411) #26 CD72 (ENSBTAG00000011409) #27 TESK1 (ENSBTAG00000011406) #28 FAM166B (ENSBTAG00000032509) #29 RUSC2 (ENSBTAG00000011403) #30 ENSBTAG00000011402 #31 UNC13B (ENSBTAG00000011397) #32 ATOSB (ENSBTAG00000011394) #33 STOML2 (ENSBTAG00000011388) #34 PIGO (ENSBTAG00000044135) #35 FANCG (ENSBTAG00000015005) #36 VCP (ENSBTAG00000015000) #37 Siberian musk deer MODERN SPECIES 29 ENSMMSG00000015011 #9 ENSMMSG00000015017 ##11 OR2S2 (ENSMMSG00000015024) ##11 HRCT1 (ENSMMSG00000015040) OR13J1 (ENSMMSG00000015046) #11 TMEM8B (ENSMMSG00000015059) #12 FAM221B (ENSMMSG00000015107) #13 HINT2 (ENSMMSG00000015132) #14 ENSMMSG00000015165 #15 NPR2 (ENSMMSG00000015203) #16 MSMP (ENSMMSG00000015255) #17 RGP1 (ENSMMSG00000015277) #18 GBA2 (ENSMMSG00000015315) #19 CREB3 (ENSMMSG00000015379) #20 TLN1 (ENSMMSG00000015440) #21 ENSMMSG00000015633 #22 CA9 (ENSMMSG00000015710) #23 ARHGEF39 (ENSMMSG00000015773) #24 CCDC107 (ENSMMSG00000015845) #25 SIT1 (ENSMMSG00000015901) #26 ENSMMSG00000015921 #27 TESK1 (ENSMMSG00000015939) #28 FAM166B (ENSMMSG00000016004) #29 RUSC2 (ENSMMSG00000016099) #30 ENSMMSG00000016245 #31 UNC13B (ENSMMSG00000017606) #32 ATOSB (ENSMMSG00000021058) #33 STOML2 (ENSMMSG00000013696) #34 PIGO (ENSMMSG00000013774) #35 ENSMMSG00000013864 #36 VCP (ENSMMSG00000013911) #37 Pecora ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.h.b #22 Yarkand deer MODERN SPECIES 21 ENSCHYG00000021475 #9 ENSCHYG00000021448 ##11 ENSCHYG00000021426 ##11 OR2S2 (ENSCHYG00000021412) ##11 HRCT1 (ENSCHYG00000021366) TMEM8B (ENSCHYG00000021241) #12 FAM221B (ENSCHYG00000021157) #13 HINT2 (ENSCHYG00000021062) #14 SPAG8 (ENSCHYG00000020945) #15 NPR2 (ENSCHYG00000020493) #16 MSMP (ENSCHYG00000020407) #17 RGP1 (ENSCHYG00000020238) #18 GBA2 (ENSCHYG00000020190) #19 CREB3 (ENSCHYG00000020022) #20 TLN1 (ENSCHYG00000018771) #21 ENSCHYG00000018251 #22 CA9 (ENSCHYG00000018143) #23 ARHGEF39 (ENSCHYG00000017913) #24 CCDC107 (ENSCHYG00000017525) #25 ENSCHYG00000017430 #26 CD72 (ENSCHYG00000017324) #27 TESK1 (ENSCHYG00000017230) #28 ENSCHYG00000017158 RUSC2 (ENSCHYG00000017110) #30 ENSCHYG00000016777 #31 UNC13B (ENSCHYG00000014450) #32 ENSCHYG00000026628 #33 STOML2 (ENSCHYG00000026604) #34 PIGO (ENSCHYG00000026575) #35 FANCG (ENSCHYG00000026529) #36 VCP (ENSCHYG00000026503) #37 Percora_a ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.h.b #22 Bovidae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.h.b #22 Caprinae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.h.b #22 Goat MODERN SPECIES 27 ENSCHIG00000002364 ##11 OR2S2 (ENSCHIG00000005494) ##11 SPAAR (ENSCHIG00000023998) OR13J1 (ENSCHIG00000012438) #11 ENSCHIG00000013865 ENSCHIG00000013918 #12 FAM221B (ENSCHIG00000025372) #13 HINT2 (ENSCHIG00000010130) #14 ENSCHIG00000007164 #15 NPR2 (ENSCHIG00000008754) #16 MSMP (ENSCHIG00000017876) #17 RGP1 (ENSCHIG00000020979) #18 GBA2 (ENSCHIG00000025213) #19 CREB3 (ENSCHIG00000010117) #20 TLN1 (ENSCHIG00000006075) #21 ENSCHIG00000014590 #22 CA9 (ENSCHIG00000019915) #23 ARHGEF39 (ENSCHIG00000025444) #24 CCDC107 (ENSCHIG00000015321) #25 SIT1 (ENSCHIG00000021361) #26 CD72 (ENSCHIG00000026462) #27 TESK1 (ENSCHIG00000013203) #28 FAM166B (ENSCHIG00000015961) #29 RUSC2 (ENSCHIG00000021467) #30 ENSCHIG00000027178 ENSCHIG00000026189 #31 ENSCHIG00000012743 #32 ATOSB (ENSCHIG00000018514) #33 STOML2 (ENSCHIG00000025806) #34 PIGO (ENSCHIG00000013960) #35 FANCG (ENSCHIG00000021663) #36 Siberian musk deer MODERN SPECIES 1266 PAICS (ENSMMSG00000024303) PPAT (ENSMMSG00000024306) ENSMMSG00000024308 ENSMMSG00000024310 AASDH (ENSMMSG00000024311) ENSMMSG00000024316 ENSMMSG00000024317 CEP135 (ENSMMSG00000024320) EXOC1 (ENSMMSG00000024323) EXOC1L (ENSMMSG00000024327) NMU (ENSMMSG00000024331) PDCL2 (ENSMMSG00000024349) CLOCK (ENSMMSG00000020910) TMEM165 (ENSMMSG00000021016) SRD5A3 (ENSMMSG00000021061) ENSMMSG00000021085 #22 KDR (ENSMMSG00000021120) KIT (ENSMMSG00000021225) PDGFRA (ENSMMSG00000021277) ENSMMSG00000021324 ##22 GSX2 (ENSMMSG00000021348) CHIC2 (ENSMMSG00000021379) ENSMMSG00000021416 LNX1 (ENSMMSG00000021431) ENSMMSG00000021486 SCFD2 (ENSMMSG00000021640) RASL11B (ENSMMSG00000021670) USP46 (ENSMMSG00000021696) SPATA18 (ENSMMSG00000021782) SGCB (ENSMMSG00000021920) LRRC66 (ENSMMSG00000021932) Laurasiatheria_b ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Carnivora ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Caniformia ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Canidae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Canis_lupus ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Dog MODERN SPECIES 3 PGK2 (ENSCAFG00845006942) ENSCAFG00845006978 DEFB114 (ENSCAFG00845007058) DEFB113 (ENSCAFG00845007099) DEFB110 (ENSCAFG00845007134) DEFB112 (ENSCAFG00845007163) TFAP2D (ENSCAFG00845007225) TFAP2B (ENSCAFG00845007336) PKHD1 (ENSCAFG00845007749) ENSCAFG00845008776 ENSCAFG00845008815 MCM3 (ENSCAFG00845008858) PAQR8 (ENSCAFG00845008976) EFHC1 (ENSCAFG00845009042) TRAM2 (ENSCAFG00845009321) ENSCAFG00845009462 #22 ENSCAFG00845009512 ENSCAFG00845009595 ENSCAFG00845009638 ENSCAFG00845009716 GSTA4 (ENSCAFG00845009775) CILK1 (ENSCAFG00845009901) FBXO9 (ENSCAFG00845010007) ENSCAFG00845010095 GCM1 (ENSCAFG00845010149) ELOVL5 (ENSCAFG00845010176) ENSCAFG00845010216 ENSCAFG00845010249 GCLC (ENSCAFG00845010300) ENSCAFG00845010386 KLHL31 (ENSCAFG00845010535) Caniformia_b ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Ursidae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Ursus ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Polar bear MODERN SPECIES 191 ENSUMAG00000007469 ##11 ENSUMAG00000007466 OR13J1 (ENSUMAG00000007463) #11 ENSUMAG00000007462 FAM221B (ENSUMAG00000007458) #13 ENSUMAG00000007454 #12 HINT2 (ENSUMAG00000007451) #14 SPAG8 (ENSUMAG00000007448) #15 NPR2 (ENSUMAG00000007437) #16 MSMP (ENSUMAG00000007433) #17 RGP1 (ENSUMAG00000007428) #18 GBA2 (ENSUMAG00000007217) #19 CREB3 (ENSUMAG00000007116) #20 ENSUMAG00000006769 #22 CA9 (ENSUMAG00000006763) #23 ARHGEF39 (ENSUMAG00000006759) #24 CCDC107 (ENSUMAG00000006757) #25 SIT1 (ENSUMAG00000006752) #26 ENSUMAG00000006750 #27 ENSUMAG00000006747 #27 TESK1 (ENSUMAG00000006745) #28 FAM166B (ENSUMAG00000006741) #29 RUSC2 (ENSUMAG00000006736) #30 ENSUMAG00000006640 #31 UNC13B (ENSUMAG00000006521) #32 ENSUMAG00000006433 ##32 ENSUMAG00000006421 ATOSB (ENSUMAG00000006412) #33 PIGO (ENSUMAG00000006408) #35 Mustelinae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 American mink MODERN SPECIES 494 ENSNVIG00000017068 ##11 ENSNVIG00000017059 ##11 SPAAR (ENSNVIG00000017044) HRCT1 (ENSNVIG00000017033) OR13J1 (ENSNVIG00000017028) #11 TMEM8B (ENSNVIG00000016974) #12 FAM221B (ENSNVIG00000016953) #13 HINT2 (ENSNVIG00000016936) #14 SPAG8 (ENSNVIG00000016925) #15 NPR2 (ENSNVIG00000016877) #16 MSMP (ENSNVIG00000016864) #17 RGP1 (ENSNVIG00000016849) #18 GBA2 (ENSNVIG00000016722) #19 CREB3 (ENSNVIG00000016702) #20 TLN1 (ENSNVIG00000016623) #21 ENSNVIG00000016587 #22 CA9 (ENSNVIG00000016550) #23 ARHGEF39 (ENSNVIG00000016533) #24 CCDC107 (ENSNVIG00000016507) #25 SIT1 (ENSNVIG00000016494) #26 CD72 (ENSNVIG00000016439) #27 TESK1 (ENSNVIG00000016421) #28 FAM166B (ENSNVIG00000016398) #29 RUSC2 (ENSNVIG00000016360) #30 ENSNVIG00000016022 #31 UNC13B (ENSNVIG00000015744) #32 Marsupialia ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Marsupialia_b ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Diprotodontia ANCESTRAL SPECIES 21 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 ENSGT00940000160498 ENSGT00940000161883 ENSGT00940000157861 #12 ENSGT00770000120611.A #13 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000018608 #25 ENSGT00390000016476 #26 ENSGT00390000003668 #27 ENSGT00940000157807 #28 ENSGT00940000154822.b #29 ENSGT00900000141033.a #30 ENSGT00940000161917 #31 ENSGT00940000154929.A #32 ENSGT00940000159834 #33 ENSGT01030000234614.A #34 ENSGT00910000144278 #35 ENSGT00390000007195 #36 ENSGT00900000141071 #37 Diprotodontia_a ANCESTRAL SPECIES 17 ENSGT00940000160893 ENSGT00940000160352 ENSGT00940000156355 ENSGT00940000160498 ENSGT00940000161883 ENSGT00940000157861 #12 ENSGT00770000120611.A #13 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000016476 #26 ENSGT00390000003668 #27 ENSGT00940000157807 #28 ENSGT00940000154822.b #29 ENSGT00900000141033.a #30 ENSGT00940000161917 #31 ENSGT00940000154929.A #32 ENSGT00940000159834 #33 ENSGT01030000234614.A #34 ENSGT00910000144278 #35 ENSGT00390000007195 #36 ENSGT00900000141071 #37 ENSGT00970000197396 Common wonbat MODERN SPECIES 1066 EARS2 (ENSVURG00010013898) GGA2 (ENSVURG00010013907) COG7 (ENSVURG00010013923) SCNN1B (ENSVURG00010013936) SCNN1G (ENSVURG00010013955) USP31 (ENSVURG00010013972) HS3ST2 (ENSVURG00010013987) ENSVURG00010013993 ENSVURG00010014001 #12 HINT2 (ENSVURG00010014013) #14 NPR2 (ENSVURG00010014021) #16 MSMP (ENSVURG00010014036) #17 ENSVURG00010014044 #18 GBA2 (ENSVURG00010014087) #19 TLN1 (ENSVURG00010014535) #21 ENSVURG00010014594 #22 CA9 (ENSVURG00010014611) #23 ARHGEF39 (ENSVURG00010014623) #24 SIT1 (ENSVURG00010014654) #26 ENSVURG00010014677 #27 TESK1 (ENSVURG00010014691) #28 FAM166B (ENSVURG00010014705) #29 RUSC2 (ENSVURG00010014723) #30 ENSVURG00010014773 #31 ENSVURG00010014895 #32 ENSVURG00010015032 ENSVURG00010015057 #36 VCP (ENSVURG00010015083) #37 ENSVURG00010015111 DNAJB5 (ENSVURG00010015125) PHF24 (ENSVURG00010015153) koala MODERN SPECIES 308 ENSPCIG00000027020 HS3ST2 (ENSPCIG00000035422) ENSPCIG00000021656 TMEM8B (ENSPCIG00000021657) #12 ENSPCIG00000021659 #13 HINT2 (ENSPCIG00000021660) #14 ENSPCIG00000021661 #15 NPR2 (ENSPCIG00000021662) #16 MSMP (ENSPCIG00000021663) #17 RGP1 (ENSPCIG00000021664) #18 GBA2 (ENSPCIG00000021666) #19 ENSPCIG00000033717 #20 TLN1 (ENSPCIG00000021667) #21 ENSPCIG00000021668 #22 ENSPCIG00000021669 #23 ARHGEF39 (ENSPCIG00000021671) #24 ENSPCIG00000021674 #27 TESK1 (ENSPCIG00000021676) #28 ENSPCIG00000021677 RUSC2 (ENSPCIG00000021678) #30 ENSPCIG00000021680 #31 ENSPCIG00000021684 #32 ATOSB (ENSPCIG00000021689) #33 STOML2 (ENSPCIG00000021693) #34 PIGO (ENSPCIG00000021736) #35 ENSPCIG00000021739 #36 VCP (ENSPCIG00000021741) #37 ENSPCIG00000021745 ENSPCIG00000021746 Opossum MODERN SPECIES 5 SCNN1B (ENSMODG00000006819) ENSMODG00000037558 SCNN1G (ENSMODG00000006857) USP31 (ENSMODG00000006875) HS3ST2 (ENSMODG00000049903) ENSMODG00000024726 ENSMODG00000006898 ENSMODG00000006917 #12 HINT2 (ENSMODG00000006947) #14 NPR2 (ENSMODG00000007007) #16 MSMP (ENSMODG00000007013) #17 RGP1 (ENSMODG00000007023) #18 GBA2 (ENSMODG00000007262) #19 CREB3 (ENSMODG00000007277) #20 TLN1 (ENSMODG00000007430) #21 ENSMODG00000007463 #22 CA9 (ENSMODG00000007486) #23 ARHGEF39 (ENSMODG00000007501) #24 ENSMODG00000047550 #27 ENSMODG00000045392 #27 TESK1 (ENSMODG00000007545) #28 FAM166B (ENSMODG00000029122) #29 RUSC2 (ENSMODG00000007573) #30 ENSMODG00000040614 ENSMODG00000007606 #31 ENSMODG00000007685 #32 ATOSB (ENSMODG00000007719) #33 STOML2 (ENSMODG00000007729) #34 PIGO (ENSMODG00000007748) #35 ENSMODG00000007759 #36 VCP (ENSMODG00000007809) #37 Sauria ANCESTRAL SPECIES 5 ENSGT00390000003668 #27 ENSGT00940000161883 ENSGT00940000157861 #12 ENSGT00770000120611.A #13 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.a ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000010698 Lepidosauria ANCESTRAL SPECIES 1 ENSGT00900000141033.a #30 ENSGT00940000154822.b #29 ENSGT00940000157807 #28 ENSGT00940000157861 #12 ENSGT00770000120611.A #13 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.a ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000010698 tuatara DUPLICATION tuatara MODERN SPECIES 472 ENSSPUG00000016937 NPR2 (ENSSPUG00000016945) #16 MSMP (ENSSPUG00000016967) #17 RGP1 (ENSSPUG00000016975) #18 GBA2 (ENSSPUG00000016985) #19 ENSSPUG00000016995 CREB3 (ENSSPUG00000017002) #20 TLN1 (ENSSPUG00000017026) #21 ENSSPUG00000017080 #22 ENSSPUG00000017082 #22 ENSSPUG00000017088 ENSSPUG00000017092 #23 tuatara MODERN SPECIES 472 ENSSPUG00000016937 NPR2 (ENSSPUG00000016945) #16 MSMP (ENSSPUG00000016967) #17 RGP1 (ENSSPUG00000016975) #18 GBA2 (ENSSPUG00000016985) #19 ENSSPUG00000016995 CREB3 (ENSSPUG00000017002) #20 TLN1 (ENSSPUG00000017026) #21 ENSSPUG00000017080 #22 ENSSPUG00000017082 #22 ENSSPUG00000017088 ENSSPUG00000017092 #23 Episquamata ANCESTRAL SPECIES 6 ENSGT00900000141033.a #30 ENSGT00940000154822.b #29 ENSGT00940000157807 #28 ENSGT00940000157861 #12 ENSGT00770000120611.A #13 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.a ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000010698 ENSGT00390000000631.k Toxicofera ANCESTRAL SPECIES 18 ENSGT00940000159834 #33 ENSGT00940000154929.A #32 ENSGT00940000161917.j.a #31 ENSGT00900000141033.a #30 ENSGT00940000166013 ENSGT00940000157807 #28 ENSGT00940000157861 #12 ENSGT00770000120611.A #13 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00940000156985 #16 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000010698 ENSGT00390000000631.k Elapidae ANCESTRAL SPECIES 19 ENSGT00900000141033.a #30 ENSGT00940000166013 ENSGT00940000157807 #28 ENSGT01010000230112 ENSGT00390000004855 ENSGT00940000157861 #12 ENSGT00390000001847.b.a.f ENSGT00770000120611.A #13 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00940000156985 #16 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000010698 Elapidae_a ANCESTRAL SPECIES 110 ENSGT00900000141033.a #30 ENSGT00940000166013 ENSGT00940000157807 #28 ENSGT01010000230112 ENSGT00390000004855 ENSGT00940000157861 #12 ENSGT00390000001847.b.a.f ENSGT00770000120611.A #13 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00940000156985 #16 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00940000160343 #20 ENSGT00940000157006.a #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000161646 #23 ENSGT00440000033863 #24 Acanthophiinae ANCESTRAL SPECIES 99 ENSGT00900000141033.a #30 ENSGT00940000166013 ENSGT00940000157807 #28 ENSGT01010000230112 ENSGT00390000004855 ENSGT00940000157861 #12 ENSGT00390000001847.b.a.f ENSGT00770000120611.A #13 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00940000156985 #16 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00940000160343 #20 ENSGT00940000157006.a #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000161646 #23 ENSGT00440000033863 #24 Mainland tiger snake MODERN SPECIES 238 ENSNSUG00000011578 #30 ENSNSUG00000011553 TESK1 (ENSNSUG00000011550) #28 ENSNSUG00000011549 LRPAP1 (ENSNSUG00000011548) TMEM8B (ENSNSUG00000011547) #12 ENSNSUG00000011539 FAM221B (ENSNSUG00000011538) #13 TAF1C (ENSNSUG00000011474) HINT2 (ENSNSUG00000011472) #14 NPR2 (ENSNSUG00000010088) #16 RGP1 (ENSNSUG00000010081) #18 GBA2 (ENSNSUG00000010066) #19 CREB3 (ENSNSUG00000010064) #20 TLN1 (ENSNSUG00000000450) #21 ENSNSUG00000000353 #22 ENSNSUG00000000348 CA9 (ENSNSUG00000000336) #23 ARHGEF39 (ENSNSUG00000000324) #24 ENSNSUG00000000288 ENSNSUG00000000284 Eastern brown snake MODERN SPECIES 146 ENSPTXG00000012005 RUSC2 (ENSPTXG00000012004) #30 ENSPTXG00000012003 TESK1 (ENSPTXG00000012002) #28 LRPAP1 (ENSPTXG00000012001) TMEM8B (ENSPTXG00000012000) #12 ENSPTXG00000011999 FAM221B (ENSPTXG00000011998) #13 TAF1C (ENSPTXG00000011949) HINT2 (ENSPTXG00000011948) #14 NPR2 (ENSPTXG00000011706) #16 RGP1 (ENSPTXG00000011705) #18 GBA2 (ENSPTXG00000011704) #19 CREB3 (ENSPTXG00000011703) #20 TLN1 (ENSPTXG00000011574) #21 ENSPTXG00000011563 #22 ENSPTXG00000011562 ENSPTXG00000011561 MRPL17 (ENSPTXG00000011557) ENSPTXG00000011555 Blue-lipped sea krait MODERN SPECIES 952 ENSLLTG00000002756 #32 ENSLLTG00000002873 #21 ENSLLTG00000016020 #22 Laterata ANCESTRAL SPECIES 8 ENSGT00390000004855 ENSGT00940000157861 #12 ENSGT00770000120611.A #13 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.a.c ENSGT00390000001847.b.a.d ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000010698 ENSGT00390000000631.k Argentine black and white tegu MODERN SPECIES 79 RUSC2 (ENSSMRG00000020139) #30 FAM166B (ENSSMRG00000020138) #29 TESK1 (ENSSMRG00000020137) #28 LRPAP1 (ENSSMRG00000020135) TMEM8B (ENSSMRG00000020133) #12 FAM221B (ENSSMRG00000020132) #13 TAF1C (ENSSMRG00000020131) HINT2 (ENSSMRG00000020130) #14 ENSSMRG00000020129 #15 NPR2 (ENSSMRG00000020126) #16 MSMP (ENSSMRG00000020125) #17 RGP1 (ENSSMRG00000020123) #18 GBA2 (ENSSMRG00000020121) #19 ENSSMRG00000020119 TLN1 (ENSSMRG00000011912) #21 ENSSMRG00000011899 #22 ENSSMRG00000011898 CA9 (ENSSMRG00000011897) #23 ARHGEF39 (ENSSMRG00000011896) #24 MRPL17 (ENSSMRG00000011895) Archelosauria ANCESTRAL SPECIES 7 ENSGT00940000161883 ENSGT00940000157861 #12 ENSGT00770000120611.A #13 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.a.b.b ENSGT00390000001847.b.a.a ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000010698 Archosauria ANCESTRAL SPECIES 1 ENSGT00940000157807 #28 ENSGT00390000003668 #27 ENSGT00940000157861 #12 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.a.b.b ENSGT00390000001847.b.a.a ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000010698 Aves ANCESTRAL SPECIES 4 ENSGT00390000003668 #27 ENSGT00960000192524 ENSGT00940000157861 #12 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.a.b.b ENSGT00390000001847.b.a.a ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000161646 #23 ENSGT00940000165582 ENSGT00440000033863 #24 ENSGT00390000010698 ENSGT00390000014907.B ENSGT01030000235248 ENSGT00940000157749 ENSGT00910000144505 ENSGT00390000007153.a.a ENSGT00940000160263 ENSGT00940000155290.C ENSGT00390000008802 ENSGT00440000033872 ENSGT00940000154969.b Neognathae ANCESTRAL SPECIES 12 ENSGT00390000003668.d #27 ENSGT00960000192524 ENSGT00940000157861 #12 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.a.a ENSGT00390000001847.b.a.b.b ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d.b ENSGT00940000161646 #23 ENSGT00940000165582 ENSGT00440000033863 #24 ENSGT00390000010698 ENSGT00390000014907.B ENSGT01030000235248 ENSGT00940000157749 ENSGT00390000007153.a.a.cb ENSGT00910000144505 ENSGT00390000007153.a.a.bb.b ENSGT00940000160263 ENSGT00940000155290.C ENSGT00390000008802 ENSGT00440000033872 Galloanserae DUPLICATION Galloanserae ANCESTRAL SPECIES 11 ENSGT00390000003668.c.b #27 ENSGT00960000192524 ENSGT00940000157861 #12 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.a.a ENSGT00390000001847.b.a.b.b ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT01030000234542.b.b.a.a.b.e #22 ENSGT00390000002049.d.b ENSGT00940000161646 #23 ENSGT00940000175735 ENSGT00440000033863 #24 ENSGT00390000010698 ENSGT00390000014907.B ENSGT01030000235248 ENSGT00940000157749 ENSGT00390000007153.a.a.cb ENSGT00910000144505 ENSGT00390000007153.a.a.bb.b ENSGT00940000160263 ENSGT00940000155290.C ENSGT00390000008802 ENSGT00440000033872 Phasianidae ANCESTRAL SPECIES 5 ENSGT00940000163123.a.b.a ENSGT00940000157861 #12 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.a.a ENSGT00390000001847.a.g.b ENSGT00390000001847.a.h ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b.f #22 ENSGT01030000234542.b.b.a.a.b.e #22 ENSGT00390000002049.d.b ENSGT00940000161646 #23 ENSGT00940000175735 ENSGT00440000033863 #24 ENSGT00390000010698 ENSGT00390000014907.B ENSGT01030000235248 ENSGT00940000157749 ENSGT00390000007153.a.a.cb ENSGT00910000144505 ENSGT00390000007153.a.a.bb.b ENSGT00940000160263 ENSGT00940000155290.C.s.b ENSGT00390000008802 ENSGT00440000033872 Phasianidae_b ANCESTRAL SPECIES 5 ENSGT00940000157861 #12 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.a.a ENSGT00390000001847.a.g.b ENSGT00390000001847.a.h ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT00390000002049.d.a.a ENSGT01030000234542.b.b.a.a.b.e #22 ENSGT00390000002049.d.b ENSGT00940000161646 #23 ENSGT00940000175735 ENSGT00440000033863 #24 ENSGT00390000010698 ENSGT00390000014907.B ENSGT01030000235248 ENSGT00940000157749 ENSGT00910000144505 ENSGT00390000007153.a.a.bb.b ENSGT00940000160263 ENSGT00940000155290.C.s.b ENSGT00390000008802 ENSGT00440000033872 ENSGT00940000154969.b Chicken MODERN SPECIES 131 TAF1C (ENSGALG00010009574) HINT1 (ENSGALG00010009594) #14 ENSGALG00010009629 #15 NPR2 (ENSGALG00010009640) #16 MSMP (ENSGALG00010009657) #17 RGP1 (ENSGALG00010009704) #18 GBA2 (ENSGALG00010009722) #19 AVDL (ENSGALG00010011609) ENSGALG00010011735 AVR7 (ENSGALG00010011749) AVR2 (ENSGALG00010012856) AVD (ENSGALG00010011634) CREB3 (ENSGALG00010011759) #20 TLN1 (ENSGALG00010011793) #21 TPM2 (ENSGALG00010010970) #22 ENSGALG00010009070 #22 ENSGALG00010012290 CA9 (ENSGALG00010012303) #23 ENSGALG00010012322 ARHGEF39 (ENSGALG00010012334) #24 MRPL17 (ENSGALG00010010496) CCBE1 (ENSGALG00010011099) PMAIP1 (ENSGALG00010009024) PDZD2 (ENSGALG00010015647) ENSGALG00010014862 GOLPH3 (ENSGALG00010014877) MTMR12 (ENSGALG00010014887) ENSGALG00010014907 SUB1 (ENSGALG00010012449) NPR3 (ENSGALG00010013669) TARS (ENSGALG00010013116) Anatidae ANCESTRAL SPECIES 20 ENSGT00940000157807 #28 ENSGT00960000192524 ENSGT00940000157861 #12 ENSGT00940000157905 #14 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.a.a ENSGT00390000001847.b.a.b.b ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT01030000234542.b.b.a.a.b.e #22 ENSGT00390000002049.d.b ENSGT00940000161646 #23 ENSGT00940000175735 ENSGT00440000033863 #24 ENSGT00390000010698 ENSGT00390000014907.B ENSGT01030000235248 ENSGT00940000157749 ENSGT00390000007153.a.a.cb ENSGT00940000160263 ENSGT00940000155290.C ENSGT00390000008802 ENSGT00440000033872 ENSGT00940000154969.b ENSGT00940000155855 Pink-footed goose MODERN SPECIES 303 TMEM8B (ENSABRG00000009740) #12 HINT2 (ENSABRG00000009763) #14 ENSABRG00000009783 #16 MSMP (ENSABRG00000009805) #17 RGP1 (ENSABRG00000009811) #18 GBA2 (ENSABRG00000009828) #19 ENSABRG00000009909 ENSABRG00000009937 CREB3 (ENSABRG00000009979) #20 TLN1 (ENSABRG00000010631) #21 ENSABRG00000016852 #22 ENSABRG00000016869 CA9 (ENSABRG00000016872) #23 ENSABRG00000016876 ARHGEF39 (ENSABRG00000016881) #24 MRPL17 (ENSABRG00000016883) CCBE1 (ENSABRG00000016885) ENSABRG00000016893 PDZD2 (ENSABRG00000016900) GOLPH3 (ENSABRG00000016917) Galloanserae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.f #22 Phasianidae ANCESTRAL SPECIES 5 ENSGT00390000003668.c.b #27 ENSGT00940000163123.a.b.a ENSGT00940000157861 #12 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.a.a ENSGT00390000001847.a.g.b ENSGT00390000001847.a.h ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b.f #22 ENSGT01030000234542.b.b.a.a.b.e #22 ENSGT00390000002049.d.b ENSGT00940000161646 #23 ENSGT00940000175735 ENSGT00440000033863 #24 ENSGT00390000010698 ENSGT00390000014907.B ENSGT01030000235248 ENSGT00940000157749 ENSGT00390000007153.a.a.cb ENSGT00910000144505 ENSGT00390000007153.a.a.bb.b ENSGT00940000160263 ENSGT00940000155290.C.s.b ENSGT00390000008802 Japanese quail MODERN SPECIES 699 ENSCJPG00005006293 #27 TMEM8B (ENSCJPG00005006297) #12 TAF1C (ENSCJPG00005006300) HINT2 (ENSCJPG00005006301) #14 ENSCJPG00005006303 #15 NPR2 (ENSCJPG00005006304) #16 MSMP (ENSCJPG00005006307) #17 RGP1 (ENSCJPG00005006309) #18 GBA2 (ENSCJPG00005006317) #19 ENSCJPG00005006324 ENSCJPG00005006344 ENSCJPG00005006378 ENSCJPG00005006381 ENSCJPG00005006385 #20 TLN1 (ENSCJPG00005006393) #21 ENSCJPG00005006469 #22 ENSCJPG00005006473 CA9 (ENSCJPG00005006474) #23 ENSCJPG00005006476 ARHGEF39 (ENSCJPG00005006484) #24 MRPL17 (ENSCJPG00005006491) CCBE1 (ENSCJPG00005006492) ENSCJPG00005006519 PDZD2 (ENSCJPG00005006525) GOLPH3 (ENSCJPG00005006554) MTMR12 (ENSCJPG00005006556) ZFR (ENSCJPG00005006565) SUB1 (ENSCJPG00005006570) ENSCJPG00005006581 NPR3 (ENSCJPG00005006582) TARS1 (ENSCJPG00005006584) Phasianidae_b ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.f #22 Chicken MODERN SPECIES 131 TMEM8B (ENSGALG00010009565) #12 TAF1C (ENSGALG00010009574) HINT1 (ENSGALG00010009594) #14 ENSGALG00010009629 #15 NPR2 (ENSGALG00010009640) #16 MSMP (ENSGALG00010009657) #17 RGP1 (ENSGALG00010009704) #18 GBA2 (ENSGALG00010009722) #19 AVDL (ENSGALG00010011609) ENSGALG00010011735 AVR7 (ENSGALG00010011749) AVR2 (ENSGALG00010012856) AVD (ENSGALG00010011634) CREB3 (ENSGALG00010011759) #20 TLN1 (ENSGALG00010011793) #21 TPM2 (ENSGALG00010010970) #22 ENSGALG00010009070 #22 ENSGALG00010012290 CA9 (ENSGALG00010012303) #23 ENSGALG00010012322 ARHGEF39 (ENSGALG00010012334) #24 MRPL17 (ENSGALG00010010496) CCBE1 (ENSGALG00010011099) PMAIP1 (ENSGALG00010009024) PDZD2 (ENSGALG00010015647) ENSGALG00010014862 GOLPH3 (ENSGALG00010014877) MTMR12 (ENSGALG00010014887) ENSGALG00010014907 SUB1 (ENSGALG00010012449) NPR3 (ENSGALG00010013669) Neognathae_b ANCESTRAL SPECIES 5 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.b ENSGT00390000001847.a ENSGT00390000001847.b.a.a.b ENSGT00390000001847.b.a.b.b ENSGT00390000001847.b.a.a.a ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d.b ENSGT00940000161646 #23 ENSGT00940000165582 ENSGT00440000033863 #24 ENSGT00390000010698 ENSGT00390000014907.B ENSGT01030000235248 ENSGT00940000157749 ENSGT00390000007153.a.a.cb ENSGT00940000160263 ENSGT00940000155290.C.v.b ENSGT00390000008802 ENSGT00440000033872 ENSGT00940000154969.b ENSGT00940000155855 Passeriformes ANCESTRAL SPECIES 7 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.a.c ENSGT00390000001847.b.a.a.b ENSGT00390000001847.b.b ENSGT00390000001847.b.a.b.b ENSGT00390000001847.b.a.a.a ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d.b ENSGT00940000161646 #23 ENSGT00940000165582 ENSGT00440000033863 #24 ENSGT00390000010698 ENSGT00390000014907.B ENSGT01030000235248 ENSGT00940000157749 ENSGT00390000007153.a.a.bb.b ENSGT00940000160263 ENSGT00940000155290.C.v.b ENSGT00390000008802 ENSGT00440000033872 ENSGT00940000154969.b ENSGT00940000155855 Passeriformes_d ANCESTRAL SPECIES 6 ENSGT00940000163123.a.b.a ENSGT00940000157861 #12 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.b ENSGT00390000001847.b.a.b.b ENSGT00390000001847.b.a.a.a ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d.b ENSGT00940000161646 #23 ENSGT00940000165582 ENSGT00440000033863 #24 ENSGT00390000010698 ENSGT00390000014907.B ENSGT01030000235248 ENSGT00940000157749 ENSGT00390000007153.a.a.bb.b ENSGT00940000160263 ENSGT00940000155290.C.v.b ENSGT00390000008802 ENSGT00440000033872 ENSGT00940000154969.b ENSGT00940000155855 Flycatcher MODERN SPECIES 561 ENSFALG00000028435 #27 ENSFALG00000028557 TMEM8B (ENSFALG00000000149) #12 ENSFALG00000000155 HINT2 (ENSFALG00000000137) #14 ENSFALG00000000163 #15 NPR2 (ENSFALG00000000167) #16 MSMP (ENSFALG00000000172) #17 ENSFALG00000002220 ENSFALG00000026780 ENSFALG00000024662 ENSFALG00000002216 ENSFALG00000024392 ENSFALG00000002215 #20 TLN1 (ENSFALG00000002197) #21 ENSFALG00000002183 #22 ENSFALG00000002180 CA9 (ENSFALG00000002178) #23 ENSFALG00000026329 ARHGEF39 (ENSFALG00000022925) #24 ENSFALG00000014760 ENSFALG00000002172 ENSFALG00000002166 GOLPH3 (ENSFALG00000022985) MTMR12 (ENSFALG00000002155) ENSFALG00000023802 ENSFALG00000002149 ENSFALG00000026358 SUB1 (ENSFALG00000002143) ENSFALG00000002134 TARS1 (ENSFALG00000002131) Great tit MODERN SPECIES 642 TMEM8B (ENSPMJG00000005331) #12 TAF1C (ENSPMJG00000005334) HINT2 (ENSPMJG00000005336) #14 ENSPMJG00000005348 #15 NPR2 (ENSPMJG00000005350) #16 ENSPMJG00000005359 MSMP (ENSPMJG00000005365) #17 RGP1 (ENSPMJG00000005367) #18 GBA2 (ENSPMJG00000005368) #19 ENSPMJG00000005374 ENSPMJG00000005375 ENSPMJG00000005376 ENSPMJG00000005377 ENSPMJG00000005378 TLN1 (ENSPMJG00000005396) #21 ENSPMJG00000015279 #22 ENSPMJG00000015737 CA9 (ENSPMJG00000015755) #23 ENSPMJG00000015756 ARHGEF39 (ENSPMJG00000015757) #24 MRPL17 (ENSPMJG00000015758) CCBE1 (ENSPMJG00000015759) ENSPMJG00000015760 PDZD2 (ENSPMJG00000015761) GOLPH3 (ENSPMJG00000015762) MTMR12 (ENSPMJG00000015763) ZFR (ENSPMJG00000015764) SUB1 (ENSPMJG00000015766) NPR3 (ENSPMJG00000015768) TARS1 (ENSPMJG00000015769) ADAMTS12 (ENSPMJG00000015770) Cryptodira ANCESTRAL SPECIES 54 ENSGT00940000157861 #12 ENSGT00770000120611.A #13 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00950000184837 ENSGT00390000001847.b.a.b.b ENSGT00390000001847.b.a.a ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000010698 Testudinoidea ANCESTRAL SPECIES 7 ENSGT00770000120611.A #13 ENSGT01080000257333.E.m ENSGT00390000010767.b ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00950000184837 ENSGT00390000001847.b.a.b.b ENSGT00390000001847.b.a.a ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000010698 Testudinidae ANCESTRAL SPECIES 88 ENSGT00390000010767.b ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.b ENSGT00390000001847.b.a.b.a.b ENSGT00390000001847.b.a.b.b ENSGT00390000001847.b.a.a ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000010698 Abingdon island giant tortoise MODERN SPECIES 2159 ENSCABG00000018021 ENSCABG00000018019 ENSCABG00000018016 ENSCABG00000018015 CREB3 (ENSCABG00000018014) #20 TLN1 (ENSCABG00000018013) #21 ENSCABG00000018009 ##22 ENSCABG00000017962 #22 ENSCABG00000017951 CA9 (ENSCABG00000017946) #23 Goode s thornscrub tortoise MODERN SPECIES 20 ENSGEVG00005014388 ENSGEVG00005014433 ENSGEVG00005014473 #14 NPR2 (ENSGEVG00005014506) #16 ENSGEVG00005014718 MSMP (ENSGEVG00005014782) #17 RGP1 (ENSGEVG00005014826) #18 GBA2 (ENSGEVG00005014952) #19 ENSGEVG00005015886 ENSGEVG00005015962 ENSGEVG00005015996 ENSGEVG00005016205 CREB3 (ENSGEVG00005016381) #20 ENSGEVG00005016488 #21 ENSGEVG00005017138 ##22 ENSGEVG00005017178 #22 ENSGEVG00005017211 ##22 ENSGEVG00005017242 CA9 (ENSGEVG00005002088) #23 ARHGEF39 (ENSGEVG00005002132) #24 MRPL17 (ENSGEVG00005002158) Emydidae ANCESTRAL SPECIES 105 ENSGT00390000010767.b ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.b.a.b.a.a ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000010698 painted turtle MODERN SPECIES 938 MSMP (ENSCPBG00000021736) #17 RGP1 (ENSCPBG00000021737) #18 GBA2 (ENSCPBG00000021738) #19 ENSCPBG00000021858 ENSCPBG00000021862 ENSCPBG00000021869 CREB3 (ENSCPBG00000021872) #20 TLN1 (ENSCPBG00000021989) #21 ENSCPBG00000024046 #22 ENSCPBG00000024052 CA9 (ENSCPBG00000024055) #23 ENSCPBG00000024062 RUSC2 (ENSCPBG00000024066) #30 ENSCPBG00000024072 ENSCPBG00000024078 #31 UNC13B (ENSCPBG00000024089) #32 Three-toed box turtle MODERN SPECIES 193 CREB3 (ENSTMTG00000016987) #20 TLN1 (ENSTMTG00000017344) #21 TPM2 (ENSTMTG00000021154) ##22 ENSTMTG00000021158 #22 ENSTMTG00000021165 CA9 (ENSTMTG00000021169) #23 ARHGEF39 (ENSTMTG00000021180) #24 MRPL17 (ENSTMTG00000021189) Anura ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Frog MODERN SPECIES ENSXETG00000042858 galt (ENSXETG00000041124) sigmar1 (ENSXETG00000047722) ARID3C (ENSXETG00000047338) dctn3 (ENSXETG00000045128) dnai1 (ENSXETG00000041591) ENSXETG00000044011 fam219a (ENSXETG00000041566) ENSXETG00000044740 ENSXETG00000045540 ENSXETG00000048189 ENSXETG00000040557 creb3 (ENSXETG00000047888) #20 tln1 (ENSXETG00000014649) #21 ENSXETG00000045380 tpm2 (ENSXETG00000009615) #22 ENSXETG00000046797 ENSXETG00000046054 ENSXETG00000045781 ENSXETG00000047703 ca9 (ENSXETG00000046031) #23 ENSXETG00000048978 XB5900382 [provisional:myh3] (ENSXETG00000049456) ENSXETG00000046379 ENSXETG00000039865 arhgef39 (ENSXETG00000020139) #24 smpd5l (ENSXETG00000031246) Actinopterygii ANCESTRAL SPECIES 223 ENSGT00940000158423 ENSGT00940000157203 ENSGT00390000002799 ENSGT00940000157585 ENSGT00960000186669 ENSGT00940000157471 ENSGT01030000234515.a.b.a.a ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000156893 ENSGT00390000018360 ENSGT00390000011497 ENSGT00950000183094.a ENSGT00940000159348 ENSGT00940000161136 ENSGT00940000154716 ENSGT00940000154201.a.a.b.d ENSGT00940000164119 Neopterygii ANCESTRAL SPECIES 45 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00940000157326 ENSGT00940000160287 ENSGT00940000156591 ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000155603.A.b.c ENSGT00940000159608 ENSGT00950000182908.A ENSGT00940000159154 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000156893 ENSGT00390000018360 ENSGT00390000011497 ENSGT00950000183094.a.m ENSGT00940000159348 ENSGT00940000161136 ENSGT00940000154716 ENSGT00940000154201.a.a.b.d ENSGT00940000164119 ENSGT01030000234515.a.b.a.a ENSGT00940000157471 ENSGT00940000157585 ENSGT00940000158423 ENSGT00390000002799 Osteoglossocephalai ANCESTRAL SPECIES 8 ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00940000157326 ENSGT00940000160287 ENSGT00940000156591 ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000159608 ENSGT00950000182908.A ENSGT00940000159154 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000182891.b.a ENSGT00940000155363.w ENSGT00950000182891.b.b.b.b.b ENSGT00940000159989 ENSGT00530000063335.B.a.a.b ENSGT00900000141074 ENSGT00900000141033.b.b ##30 ENSGT00940000156698.d ENSGT00390000015248 ENSGT00390000009464 ENSGT00940000157203.c ENSGT00390000002799 ENSGT00940000158423 ENSGT00940000157619.a.a ENSGT01030000234784 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000156893 ENSGT00390000018360.a ENSGT00390000011497 ENSGT00940000177218 ENSGT00950000183094.a.m ENSGT00940000159348 ENSGT00940000161136 ENSGT00940000154716.gc.a ENSGT01030000234515.a.b.a.a.f ENSGT00940000157585 ENSGT00940000157471.a ENSGT00940000164374.A ENSGT00940000154947.l ENSGT01060000248708 Otomorpha ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Otophysi ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Cyprinoidei ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Cyprininae ANCESTRAL SPECIES 987 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d.c ENSGT00940000156893.lb.b ENSGT00390000018878.l ENSGT00940000157873.c.a Cyprininae_a ANCESTRAL SPECIES 313 ENSGT00940000157006.m.a #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d.c ENSGT00940000156893.lb.b ENSGT00390000018878.l ENSGT00940000157873.c.a ENSGT00940000156579.i ENSGT00940000157873.d ENSGT00940000156579.h ENSGT00390000005782 ENSGT00390000009048.a.b.c.b ENSGT00940000157507.e.a ENSGT00390000009048.a.b.c.a ENSGT00940000157507.e.b ENSGT00390000005646 ENSGT00940000157357.f.c ENSGT00940000156591.mb.b Golden-line barbel MODERN SPECIES 1698 tln1 (ENSSGRG00000033165) #21 ENSSGRG00000032902 #22 zgc:114200 (ENSSGRG00000032900) zgc:114200 (ENSSGRG00000032899) ENSSGRG00000032893 Euteleosteomorpha ANCESTRAL SPECIES 4 ENSGT00940000159168 ENSGT00940000157326 ENSGT00940000160287 ENSGT00940000156591 ENSGT00950000183162.b ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000155603.A.a.a.a ENSGT00950000182908.A ENSGT00940000159154 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000156893 ENSGT00390000018360.a ENSGT00390000011497 ENSGT00940000177218 ENSGT00950000183094.a.m ENSGT00940000159348 ENSGT00940000161136 ENSGT00940000154716.gc.a ENSGT01030000234515.a.b.a.a.f ENSGT00940000157585 ENSGT00940000157471.a ENSGT00940000164374.A ENSGT00940000154947.l ENSGT01060000248708 Protacanthopterygii ANCESTRAL SPECIES 17 ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00940000157326 ENSGT00940000160287 ENSGT00940000156591 ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000155603.A.a.a.a ENSGT00950000182908.A ENSGT00940000159154 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00390000018878 ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000169704 ENSGT01030000234535.F.b ENSGT00940000156369 ENSGT00390000009048.a.b ENSGT00390000005782 ENSGT00940000153832 ENSGT00530000064469 ENSGT00940000158196 ENSGT00940000159053 ENSGT00940000157484 ENSGT00940000160540 Salmoninae ANCESTRAL SPECIES 132 ENSGT00940000159168 ENSGT00940000157326 ENSGT01020000230338.a.b.b.a.b.a.a.a.a.a.b ENSGT00940000160287 ENSGT00940000156591 ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000155603.A.a.a.a.b ENSGT00950000182908.A ENSGT00940000159154.i ENSGT01070000253760.b.b.a.a.c.b.d.b ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00970000193390.c.a.a.b.b.b.b ENSGT00390000002049.d ENSGT00940000156893.ab ENSGT00390000018878 ENSGT00940000157873 ENSGT00730000111912.A.a.a.a.a.b ENSGT00940000156579 ENSGT00940000169704 ENSGT01030000234535.F.b ENSGT00940000156369 ENSGT00390000009048.a.b ENSGT00390000005782 ENSGT00940000153832 ENSGT00530000064469 ENSGT00940000158196 Huchen MODERN SPECIES 575 MAP3K1 (ENSHHUG00000009340) ENSHHUG00000009310 hmgcs1 (ENSHHUG00000009239) tln1 (ENSHHUG00000007464) #21 ENSHHUG00000006249 #22 ENSHHUG00000006230 zgc:114200 (ENSHHUG00000006222) ENSHHUG00000006214 dcp2 (ENSHHUG00000006205) reep5 (ENSHHUG00000006159) ENSHHUG00000006130 CHD1 (ENSHHUG00000005656) st8sia4 (ENSHHUG00000005644) PAM (ENSHHUG00000005575) Northern pike MODERN SPECIES 13 PURG (ENSELUG00000017851) WRN (ENSELUG00000017817) nrg1 (ENSELUG00000017711) fut10 (ENSELUG00000017684) ins (ENSELUG00000017617) ENSELUG00000017662 ENSELUG00000017453 slc38a9 (ENSELUG00000017351) ddx4 (ENSELUG00000017328) ENSELUG00000017294 il6st (ENSELUG00000017271) ANKRD55 (ENSELUG00000017239) MAP3K1 (ENSELUG00000017221) hmgcs1 (ENSELUG00000017152) tln1 (ENSELUG00000017099) #21 ENSELUG00000016985 #22 zgc:114200 (ENSELUG00000016905) dcp2 (ENSELUG00000016839) reep5 (ENSELUG00000016783) KIF26A (ENSELUG00000016723) ENSELUG00000016650 ENSELUG00000016601 ENSELUG00000016571 ENSELUG00000000626 myh6 (ENSELUG00000016548) pak6b (ENSELUG00000016535) ENSELUG00000016511 ppp1r14d (ENSELUG00000016498) spint1b (ENSELUG00000016488) PLEKHG3 (ENSELUG00000016456) ENSELUG00000016373 Acanthomorphata ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Percomorphaceae ANCESTRAL SPECIES 42 ENSGT00940000159206.a ENSGT00940000157199 ENSGT01050000244857.C.b ENSGT00550000074872 ENSGT00940000153947.A ENSGT00940000160540 ENSGT00940000157484 ENSGT00940000159053 ENSGT00940000156579 ENSGT00940000157873 ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 Tiger tail seahorse MODERN SPECIES 78 ENSHCOG00000014016 ENSHCOG00000014043 ENSHCOG00000000824 chsy3 (ENSHCOG00000014054) sptlc1 (ENSHCOG00000014091) ROR2 (ENSHCOG00000014104) nfil3 (ENSHCOG00000014107) auh (ENSHCOG00000014115) syk (ENSHCOG00000014174) chd1 (ENSHCOG00000014222) reep5 (ENSHCOG00000014231) dcp2 (ENSHCOG00000014236) YTHDC2 (ENSHCOG00000014281) hmgcs1 (ENSHCOG00000014306) tln1 (ENSHCOG00000014489) #21 ENSHCOG00000014537 #22 ENSHCOG00000014551 PURG (ENSHCOG00000014594) slc38a9 (ENSHCOG00000014635) nrg1 (ENSHCOG00000014654) macir (ENSHCOG00000014661) ENSHCOG00000014679 PAM (ENSHCOG00000014722) pomk (ENSHCOG00000014728) naif1 (ENSHCOG00000014740) eeig1b (ENSHCOG00000014762) dpm2 (ENSHCOG00000014799) MAPKAP1 (ENSHCOG00000014831) SMARCB1 (ENSHCOG00000014858) mvb12ba (ENSHCOG00000014894) fbxw2 (ENSHCOG00000014920) Percomorphaceae_B ANCESTRAL SPECIES 16 ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00390000004945 ENSGT00940000156369 ENSGT00530000064469 ENSGT00390000005782 ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000159053 ENSGT00940000157484 ENSGT00940000160540 ENSGT00940000153947.A Percomorphaceae_C ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Percomorphaceae_D ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Carangaria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Carangaria_A ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Seriola ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Yellowtail amberjack MODERN SPECIES 2897 ENSSLDG00000022604 ENSSLDG00000022609 ENSSLDG00000022611 ENSSLDG00000022629 ENSSLDG00000022670 ENSSLDG00000022723 ENSSLDG00000022752 ENSSLDG00000022761 ENSSLDG00000022768 psmb10 (ENSSLDG00000022777) selenoh (ENSSLDG00000022786) dcp2 (ENSSLDG00000022797) YTHDC2 (ENSSLDG00000022840) hmgcs1 (ENSSLDG00000022932) tln1 (ENSSLDG00000022951) #21 ENSSLDG00000023023 #22 ENSSLDG00000023044 PURG (ENSSLDG00000023064) slc38a9 (ENSSLDG00000023081) nrg1 (ENSSLDG00000023113) ENSSLDG00000023142 pomk (ENSSLDG00000023166) PAM (ENSSLDG00000023187) ENSSLDG00000023261 Eupercaria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Eupecaria_A ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Eupecaria_B ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Perciformes ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Cottioidei ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Stickleback MODERN SPECIES 13 lmo4a (ENSGACG00000018520) lrsam1 (ENSGACG00000018522) ndor1 (ENSGACG00000018526) ntmt1 (ENSGACG00000018531) ier5l (ENSGACG00000018536) ENSGACG00000018537 ptpa (ENSGACG00000018538) crata (ENSGACG00000018549) psmb10 (ENSGACG00000018551) selenoh (ENSGACG00000018561) dcp2 (ENSGACG00000018562) YTHDC2 (ENSGACG00000018569) ENSGACG00000018573 hmgcs1 (ENSGACG00000018575) tln1 (ENSGACG00000018584) #21 ENSGACG00000018599 #22 ENSGACG00000018619 slc38a9 (ENSGACG00000018624) nrg1 (ENSGACG00000018632) TSHR (ENSGACG00000018635) reep5 (ENSGACG00000018641) chd1 (ENSGACG00000018644) syk (ENSGACG00000018650) auh (ENSGACG00000018654) ROR2 (ENSGACG00000018661) sptlc1 (ENSGACG00000018667) megf10 (ENSGACG00000018673) Ovalentaria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Ovalentaria_B ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Pomacentridae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Pomacentridae_A ANCESTRAL SPECIES 46 ENSGT00940000154079.b ENSGT00940000155946.c.b ENSGT00940000155945.i.a ENSGT00940000157955.d.a.e ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00940000157199 ENSGT00940000159700 ENSGT00940000155742.a.a ENSGT00530000063851.b ENSGT00390000016543.d ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b ENSGT00940000178133 ENSGT00940000156261.y ENSGT00940000157419 ENSGT00940000153391.c.b.a.j.b ENSGT01100000263514.B ENSGT00940000161047 Spiny chromis MODERN SPECIES 1118 YTHDC2 (ENSAPOG00000013442) hmgcs1 (ENSAPOG00000013371) tln1 (ENSAPOG00000013314) #21 ENSAPOG00000013064 ENSAPOG00000013025 #22 prrc1 (ENSAPOG00000012939) CTXN3 (ENSAPOG00000012912) lmnb1 (ENSAPOG00000012906) Amphiprion ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Clown anemonefish MODERN SPECIES 1058 YTHDC2 (ENSAOCG00000018480) hmgcs1 (ENSAOCG00000018370) tln1 (ENSAOCG00000018316) #21 ENSAOCG00000018156 #22 prrc1 (ENSAOCG00000018083) CTXN3 (ENSAOCG00000018051) lmnb1 (ENSAOCG00000018030) slc27a6 (ENSAOCG00000017995) slc12a2 (ENSAOCG00000017954) Cichlidae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Pseudocrenilabrinae ANCESTRAL SPECIES 24 ENSGT00940000156369 ENSGT00390000004945 ENSGT00940000156510.h ENSGT00940000157326 ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT01060000248556.A.a.a.a.b.a.b.i.a ENSGT01060000248556.A.a.a.a.b.a.b.i.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157419 ENSGT00940000159990 ENSGT00940000156261 ENSGT00950000183101.a.b.b.a.b ENSGT00930000151016 ENSGT00940000155946.c.b ENSGT00940000154079.b ENSGT00940000164321.d ENSGT00390000010474 ENSGT00940000166967 ENSGT00940000158323.g Nile tilapia MODERN SPECIES 19 ENSONIG00000011236 CNNM4 (ENSONIG00000011234) NEU3 (ENSONIG00000011232) ENSONIG00000011231 il1b (ENSONIG00000011230) nrg1 (ENSONIG00000011622) slc38a9 (ENSONIG00000011618) PURG (ENSONIG00000041233) ENSONIG00000011605 psmb10 (ENSONIG00000011604) ENSONIG00000031888 dcp2 (ENSONIG00000033239) YTHDC2 (ENSONIG00000011601) hmgcs1 (ENSONIG00000011599) tln1 (ENSONIG00000011589) #21 ENSONIG00000011584 #22 crata (ENSONIG00000011580) crata (ENSONIG00000011577) derl2 (ENSONIG00000011576) smarcb1b (ENSONIG00000011574) psmb7 (ENSONIG00000042918) NEK6 (ENSONIG00000011562) DENND1A (ENSONIG00000011555) ENSONIG00000029215 CRB2 (ENSONIG00000011551) fbxw2 (ENSONIG00000011549) ENSONIG00000011544 ENSONIG00000032068 ralgps1 (ENSONIG00000011540) grk5 (ENSONIG00000011525) ash2l (ENSONIG00000011518) Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 Haplochromini ANCESTRAL SPECIES 68 ENSGT00940000156369.i.a ENSGT00390000004945 ENSGT00940000156510.h ENSGT00940000157326 ENSGT00940000177163.b.c ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00940000160436.A.d.p ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT01060000248556.A.a.a.a.b.a.b.i.a ENSGT01060000248556.A.a.a.a.b.a.b.i.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157419 ENSGT00940000159990 ENSGT00940000156261 ENSGT00950000183101.a.b.b.a.b ENSGT00930000151016 ENSGT00940000154079.b ENSGT00940000155946.c.b ENSGT00940000164321.d ENSGT00390000010474 ENSGT00940000166967 ENSGT00940000158323.g Haplochromini_A ANCESTRAL SPECIES 74 ENSGT00390000004945 ENSGT00940000156510.h ENSGT00940000157326 ENSGT00940000177163.b.c ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00940000160436.A.d.p ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT01060000248556.A.a.a.a.b.a.b.i.a ENSGT01060000248556.A.a.a.a.b.a.b.i.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157419 ENSGT00940000159990 ENSGT00940000156261 ENSGT00950000183101.a.b.b.a.b ENSGT00930000151016 ENSGT00940000154079.b ENSGT00940000155946.c.b ENSGT00940000164321.d ENSGT00390000010474 ENSGT00940000166967 ENSGT00940000158323.g Haplochromini_B ANCESTRAL SPECIES 30 ENSGT00390000004945 ENSGT00940000156510.h ENSGT00940000157326 ENSGT00940000177163.b.c ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00940000160436.A.d.p ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.b #22 ENSGT01060000248556.A.a.a.a.b.a.b.i.a ENSGT01060000248556.A.a.a.a.b.a.b.i.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157419 ENSGT00940000159990 ENSGT00940000156261 ENSGT00950000183101.a.b.b.a.b ENSGT00930000151016 ENSGT00940000154079.b ENSGT00940000155946.c.b ENSGT00940000164321.d ENSGT00390000010474 ENSGT00940000166967 ENSGT00940000158323.g Zebra mbuna MODERN SPECIES 1110 il1b (ENSMZEG00005008887) pomk (ENSMZEG00005008896) ENSMZEG00005008909 nrg1 (ENSMZEG00005008945) ENSMZEG00005008964 slc38a9 (ENSMZEG00005008976) PURG (ENSMZEG00005009025) ENSMZEG00005009041 psmb10 (ENSMZEG00005009082) ENSMZEG00005009092 dcp2 (ENSMZEG00005009123) YTHDC2 (ENSMZEG00005009153) ENSMZEG00005009238 hmgcs1 (ENSMZEG00005009284) tln1 (ENSMZEG00005009313) #21 ENSMZEG00005009378 #22 crata (ENSMZEG00005009404) crata (ENSMZEG00005009438) derl2 (ENSMZEG00005009450) smarcb1b (ENSMZEG00005009461) psmb7 (ENSMZEG00005009482) NEK6 (ENSMZEG00005009505) DENND1A (ENSMZEG00005009539) CRB2 (ENSMZEG00005009561) fbxw2 (ENSMZEG00005009617) ralgps1 (ENSMZEG00005009656) ENSMZEG00005009678 grk5 (ENSMZEG00005009703) ash2l (ENSMZEG00005009740) pnx (ENSMZEG00005009765) aebp1a (ENSMZEG00005009780) Eastern happy MODERN SPECIES 19 pomk (ENSACLG00000019507) ENSACLG00000019465 ENSACLG00000019453 ENSACLG00000019446 nrg1 (ENSACLG00000019440) ENSACLG00000019386 slc38a9 (ENSACLG00000019331) ENSACLG00000019246 psmb10 (ENSACLG00000019216) selenoh (ENSACLG00000019200) dcp2 (ENSACLG00000019153) YTHDC2 (ENSACLG00000019069) hmgcs1 (ENSACLG00000019035) ENSACLG00000019027 #21 tln1 (ENSACLG00000018874) #21 ENSACLG00000016871 #22 crata (ENSACLG00000016511) crata (ENSACLG00000016301) derl2 (ENSACLG00000016134) smarcb1b (ENSACLG00000016038) psmb7 (ENSACLG00000015988) ENSACLG00000015929 PAM (ENSACLG00000015895) SEZ6L (ENSACLG00000015713) ENSACLG00000015692 SLC4A5 (ENSACLG00000015450) scarb1 (ENSACLG00000015317) ENSACLG00000015293 PURB (ENSACLG00000015253) ved (ENSACLG00000015234) polm (ENSACLG00000015180) Osteoglossiformes ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b #22 P. kingsleyae MODERN SPECIES 485 IL6ST (ENSPKIG00000019610) ANKRD55 (ENSPKIG00000019590) MAP3K1 (ENSPKIG00000019531) hmgcs1 (ENSPKIG00000019477) tln1 (ENSPKIG00000019394) #21 ENSPKIG00000019316 #22 Spotted gar MODERN SPECIES 658 WRN (ENSLOCG00000010792) ENSLOCG00000010808 nrg1 (ENSLOCG00000010824) fut10 (ENSLOCG00000010836) ENSLOCG00000010844 SH2D4A (ENSLOCG00000010857) slc38a9 (ENSLOCG00000010879) ddx4 (ENSLOCG00000010887) ENSLOCG00000010902 ENSLOCG00000010916 IL6ST (ENSLOCG00000010925) ANKRD55 (ENSLOCG00000010935) MAP3K1 (ENSLOCG00000010945) hmgcs1 (ENSLOCG00000010958) tln1 (ENSLOCG00000010969) #21 ENSLOCG00000011000 #22 hexb (ENSLOCG00000011014) ENC1 (ENSLOCG00000017543) ENSLOCG00000011024 ARHGEF28 (ENSLOCG00000011032) utp15 (ENSLOCG00000011049) ankra2 (ENSLOCG00000011062) btf3 (ENSLOCG00000011068) foxd1 (ENSLOCG00000017544) TMEM174 (ENSLOCG00000011080) fcho2 (ENSLOCG00000011085) TNPO1 (ENSLOCG00000011092) ZNF366 (ENSLOCG00000011104) ptcd2 (ENSLOCG00000011122) mrps27 (ENSLOCG00000011134) MAP1B (ENSLOCG00000011141) Elephant shark MODERN SPECIES 168 ENSCMIG00000001087 #22 rps27.1 (ENSCMIG00000001080) Cyclostomata DUPLICATION Cyclostomata ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.a #22 Lamprey MODERN SPECIES 1193 ENSPMAG00000003137 #22 RPS27L (ENSPMAG00000003134) Hagfish MODERN SPECIES 343 ELP1 (ENSEBUG00000004985) mblac2 (ENSEBUG00000005135) ENSEBUG00000005083 ENSEBUG00000011789 #22 ENSEBUG00000004822 tmed7 (ENSEBUG00000013737) ENSEBUG00000003195 ENSEBUG00000012115 s100a1 (ENSEBUG00000007887) ENSEBUG00000014299 ULK3 (ENSEBUG00000014843) gas1a (ENSEBUG00000010286) ENSEBUG00000005869 ssr2 (ENSEBUG00000005288) APTX (ENSEBUG00000013914) ENSEBUG00000007447 Cyclostomata ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.b.b #22 Hagfish MODERN SPECIES 434 ENSEBUG00000015239 mfap1 (ENSEBUG00000016958) hmg20a (ENSEBUG00000011769) ENSEBUG00000015385 ENSEBUG00000006837 ENSEBUG00000009050 ENSEBUG00000006824 ENSEBUG00000007806 scamp5a (ENSEBUG00000007660) ENSEBUG00000010070 #22 ENSEBUG00000010481 ENSEBUG00000012776 Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Gnathostomata ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Euteleostomi ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Coelacanth MODERN SPECIES 1290 ENSLACG00000003328 ENSLACG00000004061 ENSLACG00000022146 ENSLACG00000022649 ENSLACG00000006972 ENSLACG00000007675 #20 TLN1 (ENSLACG00000009979) #21 ENSLACG00000011493 ##22 Tetrapoda ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Amniota ANCESTRAL SPECIES 4 ENSGT00940000154822.b #29 ENSGT00940000157807 #28 ENSGT00390000003668 #27 ENSGT00940000161883 ENSGT00940000157861 #12 ENSGT00770000120611.A #13 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00640000091617 #15 ENSGT00940000156985 #16 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000161646 #23 ENSGT00440000033863 #24 Mammalia ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Theria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Eutheria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Carnivora ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Caniformia ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Caniformia_b ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Ursidae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Giant Panda MODERN SPECIES 1105 ENSAMEG00000028583 ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Primates ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Catarrhini ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Hominoidea ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Hominidae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Pan ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Bonobo MODERN SPECIES 16 NR1D2 (ENSPPAG00000033627) ENSPPAG00000024747 THRB (ENSPPAG00000028507) ENSPPAG00000028082 RARB (ENSPPAG00000038282) TOP2B (ENSPPAG00000030594) ENSPPAG00000016776 NGLY1 (ENSPPAG00000043951) ENSPPAG00000039839 OXSM (ENSPPAG00000032843) LRRC3B (ENSPPAG00000023537) NEK10 (ENSPPAG00000034616) ENSPPAG00000027410 ENSPPAG00000042749 SLC4A7 (ENSPPAG00000018316) ENSPPAG00000029590 ##22 EOMES (ENSPPAG00000034249) CMC1 (ENSPPAG00000040947) AZI2 (ENSPPAG00000043718) ZCWPW2 (ENSPPAG00000029225) ENSPPAG00000026966 RBMS3 (ENSPPAG00000036519) TGFBR2 (ENSPPAG00000043674) GADL1 (ENSPPAG00000027403) ENSPPAG00000029405 STT3B (ENSPPAG00000027770) OSBPL10 (ENSPPAG00000042624) ZNF860 (ENSPPAG00000033453) GPD1L (ENSPPAG00000037452) CMTM8 (ENSPPAG00000031220) ENSPPAG00000034531 Sauria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Archelosauria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Archosauria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Aves ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Neognathae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Neognathae_b ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Neognathae_c ANCESTRAL SPECIES 2 ENSGT00960000189740 ENSGT00940000157861 #12 ENSGT00390000010767 ENSGT00940000157905 #14 ENSGT00940000154371.a #17 ENSGT00390000006136 #18 ENSGT00390000010998 #19 ENSGT00390000001847.a ENSGT00390000001847.b.a.a.b ENSGT00390000001847.b.a.b.b ENSGT00390000001847.b.a.a.a ENSGT00940000160343 #20 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.b ##22 ENSGT00390000002049.d.a.b ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00390000002049.d.b ENSGT00940000161646 #23 ENSGT00440000033863 #24 ENSGT00390000010698 ENSGT00390000014907.B ENSGT00990000212732 ENSGT01030000235248 ENSGT00940000157749 ENSGT00390000007153.a.a.cb ENSGT00940000160263 ENSGT00940000155290.C.v.b ENSGT00390000008802 ENSGT00440000033872 ENSGT00940000154969.b ENSGT00940000155855 Kakapo MODERN SPECIES 19 ENSSHBG00005019794 ENSSHBG00005019787 TESK1 (ENSSHBG00005019783) #28 ENSSHBG00005019780 #27 ENSSHBG00005019777 #27 MSMP (ENSSHBG00005019773) #17 RGP1 (ENSSHBG00005019767) #18 GBA2 (ENSSHBG00005019756) #19 ENSSHBG00005019746 ENSSHBG00005019740 ENSSHBG00005019733 ENSSHBG00005019727 ENSSHBG00005019722 CREB3 (ENSSHBG00005019717) #20 TLN1 (ENSSHBG00005007239) #21 ENSSHBG00005005513 ##22 ENSSHBG00005005479 CA9 (ENSSHBG00005005453) #23 ARHGEF39 (ENSSHBG00005005426) #24 MRPL17 (ENSSHBG00005005412) CCBE1 (ENSSHBG00005005370) ENSSHBG00005005327 PDZD2 (ENSSHBG00005005278) ENSSHBG00005005265 MTMR12 (ENSSHBG00005005149) ENSSHBG00005005098 ENSSHBG00005005075 NPR3 (ENSSHBG00005005073) TARS1 (ENSSHBG00005005062) ADAMTS12 (ENSSHBG00005005047) RXFP3 (ENSSHBG00005005042) Actinopterygii ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Reedfish MODERN SPECIES 15 ENSECRG00000017625 esm1 (ENSECRG00000017659) rcl1 (ENSECRG00000017674) jak2b (ENSECRG00000017718) ENSECRG00000017792 plgrkt (ENSECRG00000017800) ENSECRG00000006544 RIC1 (ENSECRG00000006555) ERMP1 (ENSECRG00000006600) ENSECRG00000006649 ERMP1 (ENSECRG00000006657) SLC46A2 (ENSECRG00000006677) ENSECRG00000006690 ENSECRG00000006709 tln1 (ENSECRG00000006726) #21 tpm2 (ENSECRG00000006754) ##22 zgc:114200 (ENSECRG00000006786) ENSECRG00000006801 MLANA (ENSECRG00000006826) ENSECRG00000006837 ENSECRG00000006850 gldc (ENSECRG00000006880) oaz1b (ENSECRG00000006935) mboat4 (ENSECRG00000007091) PRAG1 (ENSECRG00000007098) ENSECRG00000007110 CLDN23 (ENSECRG00000007115) ENSECRG00000007141 sec24d (ENSECRG00000007231) mettl14 (ENSECRG00000007257) PRSS12 (ENSECRG00000007300) Neopterygii ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Osteoglossocephalai ANCESTRAL SPECIES 38 ENSGT00940000164921.a ENSGT00940000157243 ENSGT00950000182904.a.a.a.a ENSGT00950000182891.b.b.a ENSGT00940000155363.w ENSGT00530000063335.B.a.a ENSGT00900000141074 ENSGT00900000141033.b.b ##30 ENSGT00940000156698 ENSGT00390000015248 ENSGT00390000009464 ENSGT00940000157203.c ENSGT00390000002799 ENSGT00940000158423 ENSGT00940000157619.a.a ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00390000002049.d ENSGT00940000156893 ENSGT00390000018360.a ENSGT00390000011497 ENSGT00940000177218 ENSGT00950000183094.a.m ENSGT00940000159348 ENSGT00940000161136 ENSGT00940000154716 ENSGT01030000234515.a.b.a.a.f ENSGT00940000157585 ENSGT00940000157471.a ENSGT00940000164374.A ENSGT00940000154947.k ENSGT01060000248708 Osteoglossiformes ANCESTRAL SPECIES 39 ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00940000157326 ENSGT00940000160287 ENSGT00940000156591 ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000159608 ENSGT00950000182908.A ENSGT00940000159154 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00390000002049.d ENSGT00940000156893 ENSGT00390000018878 ENSGT00940000157873 ENSGT00940000156579 ENSGT01030000234535.F.b ENSGT00940000156369 ENSGT00390000009048.a.b ENSGT00390000005782.c Asian bonytongue MODERN SPECIES 21 ENSSFOG00015006034 PURG (ENSSFOG00015033307) WRN (ENSSFOG00015006123) nrg1 (ENSSFOG00015006282) fut10 (ENSSFOG00015006346) ENSSFOG00015006370 ENSSFOG00015006403 slc38a9 (ENSSFOG00015006467) ddx4 (ENSSFOG00015006531) ENSSFOG00015006549 IL6ST (ENSSFOG00015006588) ANKRD55 (ENSSFOG00015006619) MAP3K1 (ENSSFOG00015006667) hmgcs1 (ENSSFOG00015006716) tln1 (ENSSFOG00015006768) #21 tpm2 (ENSSFOG00015027799) ##22 zgc:114200 (ENSSFOG00015007033) ENSSFOG00015007058 dcp2 (ENSSFOG00015026653) reep5 (ENSSFOG00015007125) chd1 (ENSSFOG00015007161) st8sia4 (ENSSFOG00015029746) PAM (ENSSFOG00015007243) PPIP5K2 (ENSSFOG00015007301) macir (ENSSFOG00015033101) LYZ (ENSSFOG00015007393) ENSSFOG00015007432 DIRAS2 (ENSSFOG00015025121) syk (ENSSFOG00015007492) auh (ENSSFOG00015007576) nfil3 (ENSSFOG00015007593) Clupeocephala ANCESTRAL SPECIES 158 ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00940000157326 ENSGT00940000160287 ENSGT00940000156591 ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000155603.A.a.a.a ENSGT00950000182908.A ENSGT00940000159154 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 Euteleosteomorpha ANCESTRAL SPECIES 4 ENSGT00390000006260 ENSGT00940000159168 ENSGT00940000157326 ENSGT00940000160287 ENSGT00940000156591 ENSGT00950000183162.b ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000155603.A.a.a.a ENSGT00950000182908.A ENSGT00940000159154 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000002049.d ENSGT00940000156893 ENSGT00390000018360.a ENSGT00390000011497 ENSGT00940000177218 ENSGT00950000183094.a.m ENSGT00940000159348 ENSGT00940000161136 ENSGT00940000154716.gc.a ENSGT01030000234515.a.b.a.a.f ENSGT00940000157585 ENSGT00940000157471.a ENSGT00940000164374.A ENSGT00940000154947.l Protacanthopterygii ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Salmoninae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Salmoninae_a ANCESTRAL SPECIES 7 ENSGT00940000157326 ENSGT01020000230338.a.b.b.a.b.a.a.a.a.a.b ENSGT00940000160287 ENSGT00940000156591 ENSGT00390000014380.h.b.b.g.b ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000155603.A.a.a.a.b ENSGT00950000182908.A ENSGT00940000159154.i ENSGT01070000253760.b.b.a.a.c.b.d.b ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00970000193390.c.a.a.b.b.b.b ENSGT00390000002049.d ENSGT00940000156893.ab ENSGT00390000018878 ENSGT00940000157873 ENSGT00730000111912.A.a.a.a.a.b ENSGT00940000156579 ENSGT00940000169704 ENSGT01030000234535.F.b ENSGT00940000156369 ENSGT00390000009048.a.b ENSGT00940000153832 ENSGT00530000064469 ENSGT00940000158196 ENSGT00940000159053 Salmo ANCESTRAL SPECIES ENSGT01020000230338.a.b.b.a.b.a.a.a.a.a.b ENSGT00940000160287 ENSGT00940000156591 ENSGT01010000229155 ENSGT00390000014380.h.b.b.g.b ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000155603.A.a.a.a.b ENSGT00950000182908.A ENSGT00940000159154.i ENSGT01070000253760.b.b.a.a.c.b.d.b ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00970000193390.c.a.a.b.b.b.b ENSGT00390000002049.d ENSGT00940000156893.ab ENSGT00390000018878 ENSGT00940000157873 ENSGT00730000111912.A.a.a.a.a.b ENSGT00940000156579 ENSGT00940000169704 ENSGT01030000234535.F.b ENSGT00940000156369 ENSGT00390000009048.a.b ENSGT00390000005782 ENSGT00940000153832 ENSGT00530000064469 ENSGT00940000158196 River trout MODERN SPECIES 15 ENSSTUG00000007740 fut10 (ENSSTUG00000007744) ENSSTUG00000007806 ENSSTUG00000009918 ENSSTUG00000009951 SH2D4A (ENSSTUG00000010391) slc38a9 (ENSSTUG00000010434) ddx4 (ENSSTUG00000011345) ENSSTUG00000012782 il6st (ENSSTUG00000012834) ANKRD55 (ENSSTUG00000012895) MAP3K1 (ENSSTUG00000012919) ENSSTUG00000013253 hmgcs1 (ENSSTUG00000013271) tln1 (ENSSTUG00000013573) #21 tpm2 (ENSSTUG00000017913) ##22 ENSSTUG00000018138 zgc:114200 (ENSSTUG00000018148) ENSSTUG00000018158 dcp2 (ENSSTUG00000018167) reep5 (ENSSTUG00000018212) ENSSTUG00000018236 chd1 (ENSSTUG00000018316) ENSSTUG00000021556 st8sia4 (ENSSTUG00000021563) PAM (ENSSTUG00000021592) PPIP5K2 (ENSSTUG00000022016) LYZ (ENSSTUG00000025205) ENSSTUG00000025212 syk (ENSSTUG00000025230) DIRAS2 (ENSSTUG00000025327) Atlantic salmon MODERN SPECIES ENSSSAG00000043915 ENSSSAG00000044867 ENSSSAG00000044921 ENSSSAG00000045509 slc38a9 (ENSSSAG00000045570) ddx4 (ENSSSAG00000047903) il31r (ENSSSAG00000062925) il6st (ENSSSAG00000062955) ANKRD55 (ENSSSAG00000062982) ENSSSAG00000121380 MAP3K1 (ENSSSAG00000063014) ENSSSAG00000063197 ENSSSAG00000086906 hmgcs1 (ENSSSAG00000063210) tln1 (ENSSSAG00000063331) #21 tpm2 (ENSSSAG00000069078) ##22 ENSSSAG00000101287 zgc:114200 (ENSSSAG00000084885) ENSSSAG00000090744 dcp2 (ENSSSAG00000069304) reep5 (ENSSSAG00000069320) ENSSSAG00000102281 chd1 (ENSSSAG00000069446) ENSSSAG00000073854 st8sia4 (ENSSSAG00000073858) PAM (ENSSSAG00000073863) ppip5k2 (ENSSSAG00000073972) ENSSSAG00000112027 MACIR (ENSSSAG00000082379) LYSC2 (ENSSSAG00000076584) ENSSSAG00000076594 Oncorhynchus ANCESTRAL SPECIES 19 ENSGT00940000157326 ENSGT01020000230338.a.b.b.a.b.a.a.a.a.a.b.f ENSGT00940000160287 ENSGT00940000156591.qb.b ENSGT00390000014380.h.b.b.g.b ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000155603.A.a.a.a.b ENSGT00950000182908.A ENSGT00940000159154.i ENSGT01070000253760.b.b.a.a.c.b.d.b ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00970000193390.c.a.a.b.b.b.b ENSGT00390000002049.d ENSGT00940000156893.ab ENSGT00390000018878 ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000169704 ENSGT01030000234535.F.b ENSGT01060000249336.b.a ENSGT00940000156369 ENSGT00390000009048.a.b ENSGT00940000153832 ENSGT00530000064469 ENSGT00940000158196 ENSGT00940000159053 Rainbow trout MODERN SPECIES 26 ENSOMYG00000070439 ENSOMYG00000062354 ENSOMYG00000037984 ENSOMYG00000037677 ENSOMYG00000037549 slc38a9 (ENSOMYG00000037079) ddx4 (ENSOMYG00000032304) ENSOMYG00000031685 gp130 (ENSOMYG00000031654) ANKRD55 (ENSOMYG00000031557) MAP3K1 (ENSOMYG00000031418) ENSOMYG00000031372 hmgcs1 (ENSOMYG00000031345) ENSOMYG00000057863 tln1 (ENSOMYG00000011710) #21 tpm2 (ENSOMYG00000009972) ##22 ENSOMYG00000009756 zgc:114200 (ENSOMYG00000009742) ENSOMYG00000009707 dcp2 (ENSOMYG00000009612) ENSOMYG00000063648 reep5 (ENSOMYG00000009547) chd1 (ENSOMYG00000006829) ENSOMYG00000004615 st8sia4 (ENSOMYG00000004601) ENSOMYG00000004586 PAM (ENSOMYG00000004560) PPIP5K2 (ENSOMYG00000004223) lyz2 (ENSOMYG00000065270) ENSOMYG00000003648 ENSOMYG00000003394 Oncorhynchus_a ANCESTRAL SPECIES 12 ENSGT01020000230338.a.b.b.a.b.a.a.a.a.a.b.f ENSGT00940000160287 ENSGT00940000156591.qb.b ENSGT00940000156591.pb ENSGT00390000014380.h.b.b.g.b ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000155603.A.a.a.a.b ENSGT00950000182908.A ENSGT00940000159154.i ENSGT01070000253760.b.b.a.a.c.b.d.b ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00970000193390.c.a.a.b.b.b.b ENSGT00390000002049.d ENSGT00940000156893.ab ENSGT00390000018878 ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000169704 ENSGT01030000234535.F.b ENSGT01060000249336.b.a ENSGT00940000156369 ENSGT00390000009048.a.b ENSGT00940000153832 ENSGT00530000064469 ENSGT00940000158196 ENSGT00940000159053 Coho salmon MODERN SPECIES 15 ENSOKIG00005047679 ENSOKIG00005048504 ENSOKIG00005048505 ENSOKIG00005048529 SH2D4A (ENSOKIG00005048649) slc38a9 (ENSOKIG00005048728) ddx4 (ENSOKIG00005049084) ENSOKIG00005049123 ENSOKIG00005049132 ANKRD55 (ENSOKIG00005049156) ENSOKIG00005049167 MAP3K1 (ENSOKIG00005049180) ENSOKIG00005049222 hmgcs1 (ENSOKIG00005049242) tln1 (ENSOKIG00005049536) #21 tpm2 (ENSOKIG00005050201) ##22 ENSOKIG00005050287 zgc:114200 (ENSOKIG00005050294) ENSOKIG00005050296 dcp2 (ENSOKIG00005050306) reep5 (ENSOKIG00005050321) chd1 (ENSOKIG00005050502) ENSOKIG00005050761 st8sia4 (ENSOKIG00005050763) PAM (ENSOKIG00005050775) ENSOKIG00005050785 PPIP5K2 (ENSOKIG00005050834) LYZ (ENSOKIG00005050890) ENSOKIG00005050891 syk (ENSOKIG00005050895) DIRAS2 (ENSOKIG00005050896) Chinook salmon MODERN SPECIES 12 C5orf63 (ENSOTSG00005046372) ENSOTSG00005046371 lmnb1 (ENSOTSG00005046370) ENSOTSG00005046369 phax (ENSOTSG00005046368) aldh7a1 (ENSOTSG00005046205) RABL6 (ENSOTSG00005046199) AJM1 (ENSOTSG00005046197) ENSOTSG00005046195 ENSOTSG00005046194 ENSOTSG00005046193 PLK2 (ENSOTSG00005046191) ENSOTSG00005046190 hmgcs1 (ENSOTSG00005046187) tln1 (ENSOTSG00005045623) #21 tpm2 (ENSOTSG00005045366) ##22 ENSOTSG00005045365 zgc:114200 (ENSOTSG00005045364) ENSOTSG00005045363 dcp2 (ENSOTSG00005045362) reep5 (ENSOTSG00005045361) chd1 (ENSOTSG00005043592) ENSOTSG00005043570 st8sia4 (ENSOTSG00005043569) ENSOTSG00005043568 PAM (ENSOTSG00005043537) PPIP5K2 (ENSOTSG00005034622) LYZ (ENSOTSG00005041752) ENSOTSG00005041751 DIRAS2 (ENSOTSG00005041750) syk (ENSOTSG00005041748) Acanthomorphata ANCESTRAL SPECIES 420 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 Cod MODERN SPECIES 17 ARSB (ENSGMOG00000008406) DMGDH (ENSGMOG00000008408) bhmt (ENSGMOG00000008411) JMY (ENSGMOG00000034971) HOMER1 (ENSGMOG00000008419) ENSGMOG00000028315 ENSGMOG00000008423 ENSGMOG00000027352 ENSGMOG00000024352 ENSGMOG00000033908 ENSGMOG00000032551 ENSGMOG00000008430 ENSGMOG00000008434 ENSGMOG00000008435 ENSGMOG00000013216 #21 ENSGMOG00000013266 ##22 ENSGMOG00000013276 ENSGMOG00000018740 ENSGMOG00000000408 ENSGMOG00000003668 ptcd2 (ENSGMOG00000003637) ENSGMOG00000035280 ptger4b (ENSGMOG00000003555) ttc33 (ENSGMOG00000031606) ENSGMOG00000003508 aif1l (ENSGMOG00000030758) ENSGMOG00000000460 ENSGMOG00000032265 ENSGMOG00000027986 fibcd1b (ENSGMOG00000018250) zgc:63972 (ENSGMOG00000014024) Euacanthomorphacea ANCESTRAL SPECIES 121 ENSGT00550000074872 ENSGT00940000153947.A ENSGT00940000160540 ENSGT00940000157484 ENSGT00940000159053 ENSGT00530000064469 ENSGT00390000005782 ENSGT00940000156369 ENSGT00940000156579 ENSGT00940000157873 ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 Pinecone sodierfish MODERN SPECIES 3 smad4a (ENSMMDG00005015880) BMP10 (ENSMMDG00005015878) syk (ENSMMDG00005015877) ENSMMDG00005015865 macir (ENSMMDG00005015859) PAM (ENSMMDG00005015822) chd1 (ENSMMDG00005013821) reep5 (ENSMMDG00005013766) YTHDC2 (ENSMMDG00005013738) ENSMMDG00005013729 ENSMMDG00005013728 ENSMMDG00005013720 hmgcs1 (ENSMMDG00005013714) FASTKD5 (ENSMMDG00005013712) tln1 (ENSMMDG00005007347) #21 tpm2 (ENSMMDG00005007202) ##22 ENSMMDG00005007169 nrg1 (ENSMMDG00005007124) ENSMMDG00005007117 ENSMMDG00005007110 ENSMMDG00005007108 PURG (ENSMMDG00005007105) prnpb (ENSMMDG00005007102) PPTC7 (ENSMMDG00005007099) TBC1D10A (ENSMMDG00005007085) aplnrb (ENSMMDG00005007083) ENSMMDG00005007080 ENSMMDG00005004668 ENSMMDG00005004518 slc35e4 (ENSMMDG00005004503) ENSMMDG00005004499 Percomorphaceae ANCESTRAL SPECIES 42 ENSGT00940000157703 ENSGT00940000159206.a ENSGT00940000157199 ENSGT01050000244857.C.b ENSGT00550000074872 ENSGT00940000153947.A ENSGT00940000160540 ENSGT00940000157484 ENSGT00940000159053 ENSGT00940000156579 ENSGT00940000157873 ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 Percomorphaceae_B ANCESTRAL SPECIES 16 ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00390000004945 ENSGT00940000156369 ENSGT00530000064469 ENSGT00390000005782 ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000159053 ENSGT00940000157484 ENSGT00940000160540 Ovalentaria ANCESTRAL SPECIES 42 ENSGT00940000156369 ENSGT00390000004945 ENSGT00940000156510.h ENSGT00940000157326 ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 Ovalentaria_B ANCESTRAL SPECIES 37 ENSGT00530000064469 ENSGT00390000005782 ENSGT00940000156369 ENSGT00390000004945 ENSGT00940000156510.h ENSGT00940000157326 ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 Cichlidae ANCESTRAL SPECIES 10 ENSGT00530000064469 ENSGT00390000005782 ENSGT00940000156369 ENSGT00390000004945 ENSGT00940000156510.h ENSGT00940000157326 ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT01060000248556.A.a.a.a.b.a.b.i.a ENSGT01060000248556.A.a.a.a.b.a.b.i.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Pseudocrenilabrinae_A ANCESTRAL SPECIES 34 ENSGT00940000156369 ENSGT00390000004945 ENSGT00940000156510.h ENSGT00940000157326 ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT01060000248556.A.a.a.a.b.a.b.i.a ENSGT01060000248556.A.a.a.a.b.a.b.i.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157419 ENSGT00940000159990 ENSGT00940000156261 ENSGT00950000183101.a.b.b.a.b ENSGT00930000151016 ENSGT00940000154079.b ENSGT00940000155946.c.b ENSGT00940000164321.d ENSGT00390000010474 ENSGT00940000166967 ENSGT00940000158323.g Haplochromini ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 Haplochromini_A ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a ##22 P. nyererei MODERN SPECIES 600 PAM (ENSPNYG00000007313) ENSPNYG00000007299 pomk (ENSPNYG00000007285) ENSPNYG00000007244 nrg1 (ENSPNYG00000007214) slc38a9 (ENSPNYG00000007143) PURG (ENSPNYG00000007122) ENSPNYG00000007096 psmb10 (ENSPNYG00000007065) selenoh (ENSPNYG00000007043) dcp2 (ENSPNYG00000007021) YTHDC2 (ENSPNYG00000006908) hmgcs1 (ENSPNYG00000006855) tln1 (ENSPNYG00000006725) #21 tpm2 (ENSPNYG00000006686) ##22 crata (ENSPNYG00000006569) crata (ENSPNYG00000005955) derl2 (ENSPNYG00000005822) smarcb1b (ENSPNYG00000005772) psmb7 (ENSPNYG00000005721) NEK6 (ENSPNYG00000005699) DENND1A (ENSPNYG00000005667) Lyretail cichlid MODERN SPECIES 339 oclna (ENSNBRG00000021930) MARVELD2 (ENSNBRG00000000366) PAM (ENSNBRG00000000386) pomk (ENSNBRG00000000393) ENSNBRG00000000401 nrg1 (ENSNBRG00000000444) slc38a9 (ENSNBRG00000000512) PURG (ENSNBRG00000000556) ENSNBRG00000000572 psmb10 (ENSNBRG00000000626) selenoh (ENSNBRG00000000649) dcp2 (ENSNBRG00000000726) YTHDC2 (ENSNBRG00000000762) hmgcs1 (ENSNBRG00000000879) tln1 (ENSNBRG00000000953) #21 tpm2 (ENSNBRG00000001126) ##22 crata (ENSNBRG00000001147) crata (ENSNBRG00000001271) derl2 (ENSNBRG00000001444) smarcb1b (ENSNBRG00000001478) psmb7 (ENSNBRG00000001547) NEK6 (ENSNBRG00000002159) ENSNBRG00000002231 DENND1A (ENSNBRG00000002249) ENSNBRG00000002299 fbxw2 (ENSNBRG00000002381) ralgps1 (ENSNBRG00000002406) ENSNBRG00000002468 grk5 (ENSNBRG00000002505) ash2l (ENSNBRG00000002548) pnx (ENSNBRG00000002565) Midas cichlid MODERN SPECIES 904 YTHDC2 (ENSACIG00000012809) hmgcs1 (ENSACIG00000012786) ENSACIG00000012770 #21 tln1 (ENSACIG00000012655) #21 tpm2 (ENSACIG00000011315) ##22 crata (ENSACIG00000011114) crata (ENSACIG00000010967) derl2 (ENSACIG00000010940) smarcb1b (ENSACIG00000010918) ENSACIG00000010907 ENSACIG00000010874 PURG (ENSACIG00000010863) slc38a9 (ENSACIG00000010827) nrg1 (ENSACIG00000010804) ENSACIG00000010780 pomk (ENSACIG00000010763) PAM (ENSACIG00000010720) macir (ENSACIG00000010715) ENSACIG00000010697 reep5 (ENSACIG00000010680) Pomacentridae ANCESTRAL SPECIES 97 ENSGT00940000154079.b ENSGT00940000155946.c.b ENSGT00940000155945.i.a ENSGT00940000157955.d.a ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00940000157199 ENSGT00940000159700 ENSGT00940000155742.a.a ENSGT00530000063851.b ENSGT00390000016543.d ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b ENSGT00940000178133 ENSGT00940000156261.y ENSGT00940000157419 ENSGT00940000153391.c.b.a.j.b ENSGT01100000263514.B ENSGT00940000161047 Pomacentridae_A ANCESTRAL SPECIES 46 ENSGT00940000154079.b ENSGT00940000155946.c.b ENSGT00940000155945.i.a ENSGT00940000157955.d.a.e ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT01030000234542.b.b.a.a.b #22 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00940000157199 ENSGT00940000159700 ENSGT00940000155742.a.a ENSGT00530000063851.b ENSGT00390000016543.d ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b ENSGT00940000178133 ENSGT00940000156261.y ENSGT00940000157419 ENSGT00940000153391.c.b.a.j.b ENSGT01100000263514.B Amphiprion ANCESTRAL SPECIES 41 ENSGT00940000155946.c.b ENSGT00940000154079.b ENSGT00940000155945.i.a ENSGT00940000157955.d.a.e ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00940000157199 ENSGT00940000159700 ENSGT00940000155742.a.a ENSGT00530000063851.b ENSGT00390000016543.d ENSGT00930000151016 ENSGT00950000183101.a.b.b.a.b ENSGT00940000178133 ENSGT00940000156261.y ENSGT00940000157419 ENSGT00940000153391.c.b.a.j.b ENSGT01100000263514.B ENSGT00940000161047 Orange clownfish MODERN SPECIES 7 ENSAPEG00000015478 wdr5 (ENSAPEG00000015385) rxraa (ENSAPEG00000015360) LRRTM4 (ENSAPEG00000015324) ENSAPEG00000015309 PLA2G1B (ENSAPEG00000015302) prkab1a (ENSAPEG00000015274) ENSAPEG00000015232 ralgps1 (ENSAPEG00000015175) mvb12ba (ENSAPEG00000015128) LMX1B (ENSAPEG00000015086) dcp2 (ENSAPEG00000015029) YTHDC2 (ENSAPEG00000014873) hmgcs1 (ENSAPEG00000014803) tln1 (ENSAPEG00000014632) #21 tpm2 (ENSAPEG00000014536) ##22 prrc1 (ENSAPEG00000014517) CTXN3 (ENSAPEG00000014497) lmnb1 (ENSAPEG00000014461) slc27a6 (ENSAPEG00000014420) slc12a2 (ENSAPEG00000014310) MINAR2 (ENSAPEG00000014275) AJM1 (ENSAPEG00000014268) fbxw2 (ENSAPEG00000014230) CRB2 (ENSAPEG00000014211) ENSAPEG00000014203 ENSAPEG00000014165 psmb7 (ENSAPEG00000014128) nr5a1b (ENSAPEG00000014096) selenoh (ENSAPEG00000014076) psmb10 (ENSAPEG00000014042) Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 2386 ENSSPAG00000000197 ##22 prrc1 (ENSSPAG00000000172) CTXN3 (ENSSPAG00000000171) lmnb1 (ENSSPAG00000000119) Bicolor damselfish MODERN SPECIES 810 ralgps1 (ENSSPAG00000014745) ENSSPAG00000014768 mvb12ba (ENSSPAG00000014786) LMX1B (ENSSPAG00000014840) dcp2 (ENSSPAG00000014862) YTHDC2 (ENSSPAG00000014889) hmgcs1 (ENSSPAG00000014994) tln1 (ENSSPAG00000015040) #21 tpm2 (ENSSPAG00000015175) ##22 Atherinomorphae ANCESTRAL SPECIES 51 ENSGT00940000157326 ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000156261 ENSGT00940000159990 ENSGT00940000157419 ENSGT00940000153391.c.b.a.j.b ENSGT00940000157955.d.a ENSGT00940000155945.i.a ENSGT00390000000642 ENSGT00390000016543.d ENSGT00530000063851.b ENSGT00940000155742.a.a ENSGT00940000159700 ENSGT00940000154412.A ENSGT00390000003837 ENSGT00940000157703 ENSGT00940000159206.a Oryzias ANCESTRAL SPECIES 9 ENSGT00530000063497.a.a ENSGT00940000156662.d.f ENSGT00940000158483 ENSGT00940000153877.a.a.b ENSGT00940000164790.a ENSGT00940000156902.b ENSGT00940000153464.A.a ENSGT00950000183101.a.b.b.a.b ENSGT00930000151016 ENSGT00940000154079.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157207.a.a ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000156261 ENSGT00940000159990 ENSGT00940000157419 ENSGT00940000153391.c.b.a.j.b ENSGT00940000157955.d.a ENSGT00940000155945.i.a ENSGT00390000000642 ENSGT00390000016543.d ENSGT00530000063851.b ENSGT00940000157299.d ENSGT00940000162287.A.j ENSGT00390000010961.d ENSGT00390000016453 ENSGT00940000156639.d ENSGT00940000158634.b Oryzias_b ANCESTRAL SPECIES 4 ENSGT00530000063497.a.a ENSGT00940000156662.d.f ENSGT00940000158483 ENSGT00940000153877.a.a.b ENSGT00940000164790.a ENSGT00940000156902.b ENSGT00940000153464.A.a ENSGT00950000183101.a.b.b.a.b ENSGT00930000151016 ENSGT00940000154079.b ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157207.a.a ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000156261 ENSGT00940000159990 ENSGT00940000157419 ENSGT00940000153391.c.b.a.j.b ENSGT00940000157955.d.a ENSGT00940000155945.i.a ENSGT00390000000642 ENSGT00390000016543.d ENSGT00530000063851.b ENSGT00940000157299.d ENSGT00940000162287.A.j ENSGT00390000016453.g ENSGT00390000010961.d ENSGT00390000016453.h ENSGT00940000156639.d Indian medaka MODERN SPECIES 30 tmem230a (ENSOMEG00000018775) ENSOMEG00000018757 dpysl2b (ENSOMEG00000018743) bnip3lb (ENSOMEG00000018704) ppp2r2ab (ENSOMEG00000018677) gsna (ENSOMEG00000018557) stom (ENSOMEG00000000475) ##34 barhl1a (ENSOMEG00000018400) GTF3C4 (ENSOMEG00000018389) skp2 (ENSOMEG00000018372) MMP11 (ENSOMEG00000018333) ppp6c (ENSOMEG00000018277) hmgcs1 (ENSOMEG00000018257) ENSOMEG00000018233 #21 tln1 (ENSOMEG00000018207) #21 tpm2 (ENSOMEG00000018110) ##22 ENSOMEG00000018074 DENND1A (ENSOMEG00000018067) NEK6 (ENSOMEG00000018025) psmb7 (ENSOMEG00000017931) nr5a1b (ENSOMEG00000017891) lmx1ba (ENSOMEG00000017862) mvb12ba (ENSOMEG00000017838) MAPKAP1 (ENSOMEG00000017780) ENSOMEG00000017729 ENSOMEG00000017721 EFNA5 (ENSOMEG00000017700) ENSOMEG00000017673 ENSOMEG00000017660 TMED6 (ENSOMEG00000017626) ENSOMEG00000017613 Javanese ricefish MODERN SPECIES 3 SCAI (ENSOJAG00000015411) ENSOJAG00000015391 dync2i2 (ENSOJAG00000010843) setb (ENSOJAG00000010833) ENSOJAG00000009570 zdhhc12b (ENSOJAG00000009441) uap1l1 (ENSOJAG00000009419) ENSOJAG00000009406 fbxw2 (ENSOJAG00000009386) ralgps1 (ENSOJAG00000009088) derl2 (ENSOJAG00000009021) smarcb1b (ENSOJAG00000008974) slc25a25b (ENSOJAG00000008215) hmgcs1 (ENSOJAG00000007951) tln1 (ENSOJAG00000005590) #21 tpm2 (ENSOJAG00000005132) ##22 DENND1A (ENSOJAG00000004452) NEK6 (ENSOJAG00000003578) psmb7 (ENSOJAG00000003441) nr5a1b (ENSOJAG00000003424) ENSOJAG00000003418 lmx1ba (ENSOJAG00000003410) mvb12ba (ENSOJAG00000003389) MAPKAP1 (ENSOJAG00000003342) ENSOJAG00000003305 ENSOJAG00000003299 EFNA5 (ENSOJAG00000003291) ENSOJAG00000003283 ENSOJAG00000003260 ENSOJAG00000003240 TMED6 (ENSOJAG00000003238) Oryzias_a ANCESTRAL SPECIES 80 ENSGT00940000157207.a.a ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000156261 ENSGT00940000159990 ENSGT00940000157419 ENSGT00940000153391.c.b.a.j.b ENSGT00940000157955.d.a ENSGT00940000155945.i.a ENSGT00390000000642 ENSGT00390000016543.d ENSGT00530000063851.b ENSGT00940000157299.d ENSGT00390000010961.d ENSGT00390000016453 ENSGT00940000156639.d ENSGT00940000158634.b ENSGT00940000156820.a.b Chinese medaka MODERN SPECIES 319 dync2i2 (ENSOSIG00000009752) slc25a25b (ENSOSIG00000011740) hmgcs1 (ENSOSIG00000014224) tln1 (ENSOSIG00000014304) #21 tpm2 (ENSOSIG00000016511) ##22 DENND1A (ENSOSIG00000016559) NEK6 (ENSOSIG00000016570) psmb7 (ENSOSIG00000016894) nr5a1b (ENSOSIG00000000107) lmx1ba (ENSOSIG00000000168) mvb12ba (ENSOSIG00000000280) MAPKAP1 (ENSOSIG00000000299) ENSOSIG00000000324 ENSOSIG00000000330 EFNA5 (ENSOSIG00000000334) Japanese Medaka HdrR MODERN SPECIES 3 fbxw2 (ENSORLG00000012631) ENSORLG00000012647 uap1l1 (ENSORLG00000012682) zdhhc12b (ENSORLG00000012692) ENSORLG00000012736 setb (ENSORLG00000012750) dync2i2 (ENSORLG00000012774) ENSORLG00000012823 ENSORLG00000023290 ENSORLG00000029984 ENSORLG00000023857 ODF2 (ENSORLG00000012850) SLC25A25 (ENSORLG00000012877) hmgcs1 (ENSORLG00000012898) tln1 (ENSORLG00000013042) #21 tpm2 (ENSORLG00000013079) ##22 DENND1A (ENSORLG00000013124) NEK6 (ENSORLG00000013149) psmb7 (ENSORLG00000013170) nr5a1b (ENSORLG00000013196) lmx1ba (ENSORLG00000026058) mvb12ba (ENSORLG00000013209) MAPKAP1 (ENSORLG00000013242) ENSORLG00000027560 ENSORLG00000013256 ENSORLG00000022727 ENSORLG00000027766 ENSORLG00000024789 ENSORLG00000013401 TMED6 (ENSORLG00000013386) pip5k1ba (ENSORLG00000013413) Cyprinodontiformes ANCESTRAL SPECIES 16 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00940000157326 ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000156261 ENSGT00940000159990 ENSGT00940000157419 ENSGT00940000153391.c.b.a.j.b ENSGT00940000157955.d.a ENSGT00940000155945.i.a ENSGT00390000000642 ENSGT00390000016543.d ENSGT00530000063851.b ENSGT00940000155742.a.a ENSGT00940000159700 ENSGT00940000154412.A ENSGT00390000003837 ENSGT00940000157703 ENSGT00940000159206.a Aplocheiloidei ANCESTRAL SPECIES 62 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00940000157326 ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000156261 ENSGT00940000159990 ENSGT00940000157419 ENSGT00940000153391.c.b.a.j.b ENSGT00940000157955.d.a ENSGT00940000155945.i.a ENSGT00390000000642 ENSGT00390000016543.d ENSGT00530000063851.b ENSGT00940000155742.a.a ENSGT00940000159700 ENSGT00940000159206.a ENSGT00940000157199 ENSGT00940000154412.A ENSGT00390000003837 Turquoise killifish MODERN SPECIES 1611 Nfu_g_1_010837 (ENSNFUG00015003737) ENSNFUG00015003735 PAM (ENSNFUG00015003692) nfil3 (ENSNFUG00015003675) auh (ENSNFUG00015003670) SYK (ENSNFUG00015003624) chd1 (ENSNFUG00015002385) SLC38A9 (ENSNFUG00015001806) PURG (ENSNFUG00015001742) ENSNFUG00015001720 dcp2 (ENSNFUG00015001711) ENSNFUG00015001706 YTHDC2 (ENSNFUG00015001654) HMGCS1 (ENSNFUG00015001578) tln1 (ENSNFUG00015000902) #21 tpm2 (ENSNFUG00015000552) ##22 DENND1A (ENSNFUG00015000412) NEK6 (ENSNFUG00015000325) psmb7 (ENSNFUG00015000293) nr5a1b (ENSNFUG00015000283) ENSNFUG00015000275 LMX1B (ENSNFUG00015000264) MVB12BA (ENSNFUG00015000254) MARCH5L (ENSNFUG00015000239) ENSNFUG00015000202 ENSNFUG00015000170 HAPLN1B (ENSNFUG00015002911) ENSNFUG00015002903 XRCC4 (ENSNFUG00015002897) zcchc9 (ENSNFUG00015002885) ENSNFUG00015002876 Mangrove rivulus MODERN SPECIES 101 ENSKMAG00000016409 gpat3 (ENSKMAG00000016366) nkx6.1 (ENSKMAG00000016346) rpl17 (ENSKMAG00000016257) MFHAS1 (ENSKMAG00000016229) ENSKMAG00000016214 slc38a9 (ENSKMAG00000016172) PURG (ENSKMAG00000016155) ENSKMAG00000016137 psmb10 (ENSKMAG00000016108) ENSKMAG00000016083 dcp2 (ENSKMAG00000016066) YTHDC2 (ENSKMAG00000015969) hmgcs1 (ENSKMAG00000015892) tln1 (ENSKMAG00000015737) #21 tpm2 (ENSKMAG00000015667) ##22 DENND1A (ENSKMAG00000015603) NEK6 (ENSKMAG00000015555) VASH2 (ENSKMAG00000015521) ENSKMAG00000015456 ENSKMAG00000015408 ENSKMAG00000015339 ENSKMAG00000015249 ENSKMAG00000015229 flvcr1 (ENSKMAG00000015196) ENSKMAG00000015187 tatdn3 (ENSKMAG00000015161) nsl1 (ENSKMAG00000015144) atf3 (ENSKMAG00000015125) pex3 (ENSKMAG00000015076) ENSKMAG00000015051 Cyprinodontoidei ANCESTRAL SPECIES 36 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00940000157326 ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000156261 ENSGT00940000159990 ENSGT00940000157419 ENSGT00940000153391.c.b.a.j.b ENSGT00940000157955.d.a ENSGT00940000155945.i.a ENSGT00390000000642 ENSGT00390000016543.d ENSGT00530000063851.b ENSGT00940000155742.a.a ENSGT00940000159700 NAME_4 ANCESTRAL SPECIES 318 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000156261 ENSGT00940000159990 ENSGT00940000157419 ENSGT00940000153391.c.b.a.j.b ENSGT00940000153391.d ENSGT00940000157955.d.a Sheepshead minnow MODERN SPECIES 1407 YTHDC2 (ENSCVAG00000021377) hmgcs1 (ENSCVAG00000021237) tln1 (ENSCVAG00000021188) #21 ENSCVAG00000021042 tpm2 (ENSCVAG00000021022) ##22 Mummichog MODERN SPECIES 456 YTHDC2 (ENSFHEG00000009312) hmgcs1 (ENSFHEG00000000213) tln1 (ENSFHEG00000009104) #21 tpm2 (ENSFHEG00000008897) ##22 ENSFHEG00000008799 ENSFHEG00000008781 psmb7 (ENSFHEG00000008754) nr5a1b (ENSFHEG00000008698) Poeciliinae ANCESTRAL SPECIES 12 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00940000157326 ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000156261 ENSGT00940000159990 ENSGT00940000157419 ENSGT00940000153391.c.b.a.j.b ENSGT00940000157955.d.a ENSGT00940000155945.i.a ENSGT00390000000642 ENSGT00390000016543.d ENSGT00530000063851.b ENSGT00940000155742.a.a Platyfish MODERN SPECIES 22 nkx6.1 (ENSXMAG00000020939) rpl17 (ENSXMAG00000012219) MFHAS1 (ENSXMAG00000000212) ENSXMAG00000026289 nrg1 (ENSXMAG00000021305) slc38a9 (ENSXMAG00000007655) PURG (ENSXMAG00000007654) ENSXMAG00000007648 psmb10 (ENSXMAG00000007637) ENSXMAG00000007636 dcp2 (ENSXMAG00000007623) YTHDC2 (ENSXMAG00000007618) hmgcs1 (ENSXMAG00000006091) ENSXMAG00000024099 #21 tln1 (ENSXMAG00000007568) #21 tpm2 (ENSXMAG00000007560) ##22 DENND1A (ENSXMAG00000007556) NEK6 (ENSXMAG00000007549) psmb7 (ENSXMAG00000007535) nr5a1b (ENSXMAG00000007526) lmx1ba (ENSXMAG00000007520) mvb12ba (ENSXMAG00000024443) MAPKAP1 (ENSXMAG00000007497) ENSXMAG00000028815 ENSXMAG00000007493 slc12a2 (ENSXMAG00000007440) ENSXMAG00000024017 Poecilia ANCESTRAL SPECIES 12 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00940000157326 ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000156261 ENSGT00940000157419 ENSGT00940000153391.c.b.a.j.b ENSGT00940000157955.d.a ENSGT00940000155945.i.a ENSGT00390000000642 ENSGT00390000016543.d ENSGT00530000063851.b ENSGT00940000155742.a.a.a Guppy MODERN SPECIES 144 tpm2 (ENSPREG00000013972) ##22 NAME_6 ANCESTRAL SPECIES 111 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00940000157326 ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000156261 ENSGT00940000157419 ENSGT00940000153391.c.b.a.j.b Sailfin molly MODERN SPECIES 2920 tpm2 (ENSPLAG00000020584) ##22 ENSPLAG00000020548 Amazon molly MODERN SPECIES 593 gpat3 (ENSPFOG00000002511) ENSPFOG00000022166 nkx6.1 (ENSPFOG00000002761) rpl17 (ENSPFOG00000002869) MFHAS1 (ENSPFOG00000002987) ENSPFOG00000002996 slc38a9 (ENSPFOG00000003069) PURG (ENSPFOG00000020349) ENSPFOG00000003395 psmb10 (ENSPFOG00000003600) selenoh (ENSPFOG00000003754) dcp2 (ENSPFOG00000003762) YTHDC2 (ENSPFOG00000003895) hmgcs1 (ENSPFOG00000004371) tln1 (ENSPFOG00000004419) #21 tpm2 (ENSPFOG00000005448) ##22 DENND1A (ENSPFOG00000005530) PSMB7 (ENSPFOG00000024696) Percomorphaceae_C ANCESTRAL SPECIES 17 ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00390000004945 ENSGT00940000156369 ENSGT00530000064469 ENSGT00390000005782 ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000159053 ENSGT00940000157484 ENSGT00940000160540 ENSGT00940000153947.A Percomorphaceae_D ANCESTRAL SPECIES 15 ENSGT01060000248556.A.a.a.a.b.a.a ENSGT00390000011500 ENSGT00900000141021.b.a.d ENSGT00390000008371.b ENSGT00930000151050 ENSGT00930000151044 ENSGT00940000164907.b.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00390000004945 ENSGT00940000156369 ENSGT00530000064469 ENSGT00390000005782 ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 Anabantaria ANCESTRAL SPECIES 12 ENSGT01060000248556.A.a.a.a.b.a.a ENSGT00390000011500 ENSGT00900000141021.b.a.d ENSGT00390000008371.b ENSGT00930000151050 ENSGT00930000151044 ENSGT00940000164907.b.b ENSGT00940000155373 ENSGT00390000016526 ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00390000004945 ENSGT00940000156369 ENSGT00530000064469 ENSGT00390000005782 ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 Zig-zag eel MODERN SPECIES 3 crata (ENSMAMG00000018889) ptpa (ENSMAMG00000018951) ntmt1 (ENSMAMG00000025652) ndor1 (ENSMAMG00000019018) ENSMAMG00000019051 ENSMAMG00000027368 ENSMAMG00000019076 ENSMAMG00000019094 ENSMAMG00000019127 ENSMAMG00000019146 ENSMAMG00000019154 ENSMAMG00000019169 ENSMAMG00000019193 hmgcs1 (ENSMAMG00000019246) ENSMAMG00000019858 #21 tpm2 (ENSMAMG00000020182) ##22 ENSMAMG00000022593 ENSMAMG00000026803 ENSMAMG00000022595 ENSMAMG00000022597 ENSMAMG00000022600 ENSMAMG00000022603 ENSMAMG00000022608 ENSMAMG00000022614 ENSMAMG00000022615 ENSMAMG00000022617 SKP2 (ENSMAMG00000022618) ENSMAMG00000022619 SLC1A3 (ENSMAMG00000022626) ENSMAMG00000022629 ENSMAMG00000022631 Anabantoidei ANCESTRAL SPECIES 32 ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00390000004945 ENSGT00940000156369 ENSGT00530000064469 ENSGT00390000005782 ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 Climbing perch MODERN SPECIES 13 DENND1A (ENSATEG00000007883) NEK6 (ENSATEG00000007927) psmb7 (ENSATEG00000007952) nr5a1b (ENSATEG00000007969) lmx1ba (ENSATEG00000007999) ENSATEG00000008045 ENSATEG00000008106 MAPKAP1 (ENSATEG00000008149) ENSATEG00000008202 ENSATEG00000008226 ENSATEG00000008268 ENSATEG00000008420 ENSATEG00000008465 ENSATEG00000008527 ENSATEG00000008554 #21 ENSATEG00000008764 ##22 ENSATEG00000008794 ENSATEG00000029983 ENSATEG00000008875 ENSATEG00000008935 ENSATEG00000009095 ENSATEG00000009128 ENSATEG00000009142 ENSATEG00000009193 ENSATEG00000009223 SKP2 (ENSATEG00000009232) ENSATEG00000009252 SLC1A3 (ENSATEG00000009294) ENSATEG00000009318 ENSATEG00000009333 ENSATEG00000009375 Siamese fighting fish MODERN SPECIES 3 dpysl2b (ENSBSLG00000020555) bnip3lb (ENSBSLG00000020538) ppp2r2ab (ENSBSLG00000020348) gsna (ENSBSLG00000019519) ENSBSLG00000019438 stom (ENSBSLG00000019376) ##34 ENSBSLG00000019371 GTF3C4 (ENSBSLG00000019368) tsc1b (ENSBSLG00000019351) GFI1B (ENSBSLG00000019345) GTF3C5 (ENSBSLG00000019338) cel.1 (ENSBSLG00000019313) grin1a (ENSBSLG00000017219) ENTPD2 (ENSBSLG00000016927) slc27a6 (ENSBSLG00000016547) ENSBSLG00000015122 ##22 ENSBSLG00000015028 PURG (ENSBSLG00000014967) slc38a9 (ENSBSLG00000014601) reep5 (ENSBSLG00000014587) ENSBSLG00000014514 ENSBSLG00000014489 ZMIZ2 (ENSBSLG00000014403) ENSBSLG00000014388 DUSP26 (ENSBSLG00000014373) COX5B (ENSBSLG00000014362) ENSBSLG00000014334 tcf7l1a (ENSBSLG00000014304) ENSBSLG00000014293 ENSBSLG00000014278 dusp11 (ENSBSLG00000014263) Carangaria ANCESTRAL SPECIES 17 ENSGT00390000001566 ENSGT00940000159383 ENSGT00940000165922 ENSGT00940000165259.a ENSGT01060000248556.A.a.a.a.b.a.a ENSGT00390000011500 ENSGT00900000141021.b.a.d ENSGT00390000008371.b ENSGT00930000151050 ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00390000004945 ENSGT00940000156369 ENSGT00530000064469 ENSGT00390000005782 ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 Pleuronectoidei ANCESTRAL SPECIES 7 ENSGT00390000001566 ENSGT00940000159383 ENSGT00940000165922 ENSGT00940000165259.a ENSGT01060000248556.A.a.a.a.b.a.a ENSGT00390000011500 ENSGT00900000141021.b.a.d ENSGT00390000008371.b ENSGT00930000151050 ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00390000004945 ENSGT00940000156369 ENSGT00530000064469 ENSGT00390000005782 ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 Tongue sole MODERN SPECIES 5 ENSCSEG00000017847 ENSCSEG00000017856 wdr91 (ENSCSEG00000017864) hmgcs1 (ENSCSEG00000017895) YTHDC2 (ENSCSEG00000017911) psmb10 (ENSCSEG00000017959) ndor1 (ENSCSEG00000017975) ntmt1 (ENSCSEG00000017989) ier5l (ENSCSEG00000017996) ptpa (ENSCSEG00000018006) crata (ENSCSEG00000018060) ENSCSEG00000018101 june (ENSCSEG00000018115) THAP1 (ENSCSEG00000018118) tln1 (ENSCSEG00000018640) #21 ENSCSEG00000018690 ##22 ENSCSEG00000018702 PURG (ENSCSEG00000018750) slc38a9 (ENSCSEG00000018757) nrg1 (ENSCSEG00000018793) thnsl2 (ENSCSEG00000018800) TBC1D13 (ENSCSEG00000018804) zer1 (ENSCSEG00000018807) SH3GLB2 (ENSCSEG00000018823) PIP5KL1 (ENSCSEG00000018827) dpm2 (ENSCSEG00000018834) eeig1b (ENSCSEG00000018847) naif1 (ENSCSEG00000018859) ENSCSEG00000018864 slc25a25b (ENSCSEG00000018870) ENSCSEG00000018876 Carangaria_A ANCESTRAL SPECIES 43 ENSGT00390000001566 ENSGT00940000159383 ENSGT00940000165922 ENSGT00940000165259.a ENSGT01060000248556.A.a.a.a.b.a.a ENSGT00390000011500 ENSGT00900000141021.b.a.d ENSGT00390000008371.b ENSGT00930000151050 ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00390000004945 ENSGT00940000156369 ENSGT00530000064469 ENSGT00390000005782 ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 Seriola ANCESTRAL SPECIES 33 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E.d ENSGT00940000155301.f ENSGT00390000010767 ENSGT00940000156423.j ENSGT00940000154827 ENSGT01020000230360.c.b.a.b.a.b.c.a.b ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00390000004945 ENSGT00940000156369 ENSGT00530000064469 ENSGT00390000005782 ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000155464.a.a ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 Greater amberjack MODERN SPECIES 34 ENSSDUG00000000502 ENSSDUG00000000404 ENSSDUG00000000313 ENSSDUG00000000172 ENSSDUG00000000143 ENSSDUG00000000123 ENSSDUG00000000066 ENSSDUG00000021546 psmb10 (ENSSDUG00000021536) selenoh (ENSSDUG00000021527) dcp2 (ENSSDUG00000021505) YTHDC2 (ENSSDUG00000021389) hmgcs1 (ENSSDUG00000021303) ENSSDUG00000021287 #21 tln1 (ENSSDUG00000021210) #21 tpm2 (ENSSDUG00000021112) ##22 ENSSDUG00000021062 PURG (ENSSDUG00000021051) slc38a9 (ENSSDUG00000021002) nrg1 (ENSSDUG00000020982) ENSSDUG00000020969 pomk (ENSSDUG00000020965) PAM (ENSSDUG00000020915) ENSSDUG00000020906 macir (ENSSDUG00000020900) skp2 (ENSSDUG00000020889) nadk2 (ENSSDUG00000020851) slc1a3b (ENSSDUG00000020831) spra (ENSSDUG00000020820) SPR (ENSSDUG00000020797) smyd1a (ENSSDUG00000020775) Barramundi perch MODERN SPECIES 246 ENSLCAG00010021201 wdr91 (ENSLCAG00010021207) THAP1 (ENSLCAG00010021220) june (ENSLCAG00010021222) crata (ENSLCAG00010021259) ptpa (ENSLCAG00010021393) ier5l (ENSLCAG00010021397) ntmt1 (ENSLCAG00010021399) ndor1 (ENSLCAG00010021424) psmb10 (ENSLCAG00010021491) selenoh (ENSLCAG00010021495) dcp2 (ENSLCAG00010021498) YTHDC2 (ENSLCAG00010021517) hmgcs1 (ENSLCAG00010021564) tln1 (ENSLCAG00010021685) #21 tpm2 (ENSLCAG00010022385) ##22 ENSLCAG00010022557 slc38a9 (ENSLCAG00010022602) NRG1 (ENSLCAG00010022713) Eupercaria ANCESTRAL SPECIES 13 ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00390000004945 ENSGT00940000156369 ENSGT00530000064469 ENSGT00390000005782 ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000159053 ENSGT00940000157484 ENSGT00940000160540 ENSGT00940000153947.A Eupecaria_A ANCESTRAL SPECIES 14 ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00390000004945 ENSGT00940000156369 ENSGT00530000064469 ENSGT00390000005782 ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000159053 ENSGT00940000157484 ENSGT00940000160540 ENSGT00940000153947.A Eupecaria_B ANCESTRAL SPECIES 14 ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000159053 ENSGT00940000157484 ENSGT00940000160540 ENSGT00940000153947.A ENSGT00550000074872 ENSGT01050000244857.C.b ENSGT00940000157703 ENSGT00940000161073 Perciformes ANCESTRAL SPECIES 32 ENSGT00390000016526.n ENSGT00940000155373 ENSGT00940000164907.b.b ENSGT00930000151044 ENSGT00930000151050 ENSGT00390000008371.b ENSGT00900000141021.b.a.d ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000159053 ENSGT00940000157484 ENSGT00940000160540 ENSGT00940000153947.A ENSGT00550000074872 ENSGT01050000244857.C.b ENSGT00940000157703 ENSGT00940000161073 Cottioidei ANCESTRAL SPECIES 31 ENSGT00390000016526.n ENSGT00940000155373 ENSGT00940000164907.b.b ENSGT00930000151044 ENSGT00930000151050 ENSGT00390000008371.b ENSGT00900000141021.b.a.d ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000159053 ENSGT00940000157484 ENSGT00940000160540 ENSGT00940000153947.A ENSGT00550000074872 ENSGT01050000244857.C.b ENSGT00940000157703 ENSGT00940000161073 Lumpfish MODERN SPECIES 3 ccni (ENSCLMG00005020674) lmo4a (ENSCLMG00005020679) lrsam1 (ENSCLMG00005020684) ndor1 (ENSCLMG00005020688) ENSCLMG00005020695 ntmt1 (ENSCLMG00005020697) ier5l (ENSCLMG00005020699) ptpa (ENSCLMG00005020704) crata (ENSCLMG00005020796) psmb10 (ENSCLMG00005021200) selenoh (ENSCLMG00005021219) dcp2 (ENSCLMG00005021220) YTHDC2 (ENSCLMG00005021223) hmgcs1 (ENSCLMG00005021505) tln1 (ENSCLMG00005021513) #21 tpm2 (ENSCLMG00005021661) ##22 ENSCLMG00005021686 PURG (ENSCLMG00005021708) slc38a9 (ENSCLMG00005021733) ENSCLMG00005021906 ENSCLMG00005021908 reep5 (ENSCLMG00005021909) chd1 (ENSCLMG00005021912) syk (ENSCLMG00005022025) auh (ENSCLMG00005022040) nfil3 (ENSCLMG00005022045) ROR2 (ENSCLMG00005022048) sptlc1 (ENSCLMG00005022065) chsy3 (ENSCLMG00005022136) megf10 (ENSCLMG00005022140) SLC27A3 (ENSCLMG00005022141) Perciformes_a ANCESTRAL SPECIES 50 ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000159053 ENSGT00940000157484 ENSGT00940000160540 ENSGT00940000153947.A ENSGT00550000074872 ENSGT01050000244857.C.b ENSGT00940000157703 ENSGT00940000161073 Channel bull blenny MODERN SPECIES 3 ENSCGOG00000014211 cdk9 (ENSCGOG00000014213) lmo4a (ENSCGOG00000014283) lrsam1 (ENSCGOG00000014289) ndor1 (ENSCGOG00000014319) ntmt1 (ENSCGOG00000014621) ENSCGOG00000014624 crata (ENSCGOG00000014637) psmb10 (ENSCGOG00000014791) selenoh (ENSCGOG00000014888) hmgcs1 (ENSCGOG00000014891) YTHDC2 (ENSCGOG00000015029) dcp2 (ENSCGOG00000015554) ENSCGOG00000015559 tln1 (ENSCGOG00000015596) #21 tpm2 (ENSCGOG00000016377) ##22 ENSCGOG00000017031 PURG (ENSCGOG00000017041) slc38a9 (ENSCGOG00000017060) nrg1 (ENSCGOG00000017319) ENSCGOG00000017321 ENSCGOG00000017322 reep5 (ENSCGOG00000017324) chd1 (ENSCGOG00000017390) syk (ENSCGOG00000019562) auh (ENSCGOG00000019671) nfil3 (ENSCGOG00000019803) ROR2 (ENSCGOG00000019804) sptlc1 (ENSCGOG00000019817) chsy3 (ENSCGOG00000020525) megf10 (ENSCGOG00000020528) Pike perch MODERN SPECIES 72 crata (ENSSLUG00000018451) THAP1 (ENSSLUG00000018388) wdr91 (ENSSLUG00000018356) cmlc1 (ENSSLUG00000018335) ENSSLUG00000018327 ENSSLUG00000018322 mbd2 (ENSSLUG00000018319) ENSSLUG00000018311 dcc (ENSSLUG00000018221) tdgf1 (ENSSLUG00000018203) dcp2 (ENSSLUG00000018195) YTHDC2 (ENSSLUG00000018065) hmgcs1 (ENSSLUG00000017857) psmb10 (ENSSLUG00000017834) tln1 (ENSSLUG00000016731) #21 tpm2 (ENSSLUG00000016299) ##22 ENSSLUG00000016220 PURG (ENSSLUG00000016207) slc38a9 (ENSSLUG00000015135) nrg1 (ENSSLUG00000015050) ENSSLUG00000015047 Eupecaria_C ANCESTRAL SPECIES 9 ENSGT00940000157199 ENSGT00940000154412.A ENSGT00390000003837 ENSGT00940000161073 ENSGT00940000157703 ENSGT01050000244857.C.b ENSGT00550000074872 ENSGT00940000153947.A ENSGT00940000160540 ENSGT00940000157484 ENSGT00940000159053 ENSGT00940000156579 ENSGT00940000157873 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00390000004945 ENSGT00940000156369 ENSGT00530000064469 ENSGT00390000005782 ENSGT00940000155826 ENSGT00390000018878 ENSGT01100000263514.B ENSGT00940000161047 Gilthead seabream MODERN SPECIES 3 sptlc1 (ENSSAUG00010023466) ROR2 (ENSSAUG00010023480) ENSSAUG00010023481 ENSSAUG00010023483 nfil3 (ENSSAUG00010023484) auh (ENSSAUG00010023485) reep5 (ENSSAUG00010023486) syk (ENSSAUG00010023490) chd1 (ENSSAUG00010023512) hmgcs1 (ENSSAUG00010023691) tln1 (ENSSAUG00010023766) #21 tpm2 (ENSSAUG00010025085) ##22 ENSSAUG00010025164 PURG (ENSSAUG00010001307) ENSSAUG00010001322 slc38a9 (ENSSAUG00010001400) nrg1 (ENSSAUG00010002033) ENSSAUG00010002050 ENSSAUG00010002060 ENSSAUG00010002062 dcc (ENSSAUG00010002359) ENSSAUG00010009858 ENSSAUG00010009860 ENSSAUG00010009861 ENSSAUG00010009865 LGALS1 (ENSSAUG00010009869) ENSSAUG00010009876 Eupercaria_incertae_sedis ANCESTRAL SPECIES 6 ENSGT00940000157199 ENSGT00940000154412.A ENSGT00390000003837 ENSGT00940000161073 ENSGT00940000157703 ENSGT01050000244857.C.b ENSGT00550000074872 ENSGT00940000153947.A ENSGT00940000160540 ENSGT00940000157484 ENSGT00940000159053 ENSGT00940000156579 ENSGT00940000157873 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 ENSGT00940000156510.h ENSGT00390000004945 ENSGT00940000156369 ENSGT00530000064469 ENSGT00390000005782 ENSGT00940000155826 ENSGT00390000018878 Large yellow croaker MODERN SPECIES lmnb1 (ENSLCRG00005022800) CTXN3 (ENSLCRG00005022799) prrc1 (ENSLCRG00005022798) SLC27A3 (ENSLCRG00005022784) megf10 (ENSLCRG00005022773) chsy3 (ENSLCRG00005022769) sptlc1 (ENSLCRG00005022713) ROR2 (ENSLCRG00005022707) nfil3 (ENSLCRG00005022706) auh (ENSLCRG00005022705) syk (ENSLCRG00005022703) chd1 (ENSLCRG00005022642) reep5 (ENSLCRG00005022635) hmgcs1 (ENSLCRG00005022632) tln1 (ENSLCRG00005021926) #21 tpm2 (ENSLCRG00005021638) ##22 ENSLCRG00005021625 slc25a48 (ENSLCRG00005021623) cplx2 (ENSLCRG00005021622) thoc3 (ENSLCRG00005021620) ENSLCRG00005021616 ENSLCRG00005021613 PCDH12 (ENSLCRG00005021610) ENSLCRG00005021607 ENSLCRG00005021606 ENSLCRG00005021603 ENSLCRG00005021597 ache (ENSLCRG00005021593) ENSLCRG00005021591 zgc:92664 (ENSLCRG00005021587) rnaseka (ENSLCRG00005021584) European seabass MODERN SPECIES 9 ENSDLAG00005021598 ENSDLAG00005019921 CTXN3 (ENSDLAG00005021614) ENSDLAG00005026505 ENSDLAG00005021623 megf10 (ENSDLAG00005021895) ENSDLAG00005021980 sptlc1 (ENSDLAG00005021991) ROR2 (ENSDLAG00005022251) nfil3 (ENSDLAG00005027489) syk (ENSDLAG00005022273) ENSDLAG00005022346 ENSDLAG00005023643 hmgcs1 (ENSDLAG00005015305) ENSDLAG00005023437 #21 tpm2 (ENSDLAG00005030925) ##22 ENSDLAG00005034361 ENSDLAG00005027583 ENSDLAG00005031094 ENSDLAG00005026532 ENSDLAG00005023828 ENSDLAG00005023806 ENSDLAG00005023800 ENSDLAG00005023796 ENSDLAG00005023794 ENSDLAG00005023760 ENSDLAG00005023754 ENSDLAG00005034122 ENSDLAG00005023658 ENSDLAG00005028492 ENSDLAG00005032590 Tetraodontidae ANCESTRAL SPECIES 140 ENSGT00940000160540 ENSGT00940000157484 ENSGT00940000159053 ENSGT00940000156579 ENSGT00940000157873.a ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 ENSGT00940000157326 Fugu MODERN SPECIES 18 prrc1 (ENSTRUG00000008182) MMP11 (ENSTRUG00000008280) fpgs (ENSTRUG00000008643) cdk9 (ENSTRUG00000008976) lmo4a (ENSTRUG00000009114) ENSTRUG00000009187 pomk (ENSTRUG00000025222) nfil3 (ENSTRUG00000030296) auh (ENSTRUG00000009628) syk (ENSTRUG00000009800) ENSTRUG00000032614 chd1 (ENSTRUG00000010282) reep5 (ENSTRUG00000010796) hmgcs1 (ENSTRUG00000010889) tln1 (ENSTRUG00000011081) #21 tpm2 (ENSTRUG00000011773) ##22 il6st (ENSTRUG00000011889) PURG (ENSTRUG00000030408) slc38a9 (ENSTRUG00000012193) ENSTRUG00000029488 ENSTRUG00000026672 ROR2 (ENSTRUG00000012357) sptlc1 (ENSTRUG00000012471) mvb12ba (ENSTRUG00000012699) zer1 (ENSTRUG00000012793) TBC1D13 (ENSTRUG00000012856) DQX1 (ENSTRUG00000012911) smyd1a (ENSTRUG00000013032) spra (ENSTRUG00000013101) slc1a3b (ENSTRUG00000013124) skp2 (ENSTRUG00000021483) Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 tcea3 (ENSTNIG00000019750) ENSTNIG00000019751 ENSTNIG00000019754 ENSTNIG00000019755 josd2 (ENSTNIG00000019756) FIBIN (ENSTNIG00000019757) ENSTNIG00000019758 ENSTNIG00000019759 dync2i2 (ENSTNIG00000019760) ENSTNIG00000019761 ENSTNIG00000019763 ENSTNIG00000019765 ENSTNIG00000019766 ENSTNIG00000001573 dtnba (ENSTNIG00000001828) ENSTNIG00000001829 ##22 ENSTNIG00000001831 ENSTNIG00000001832 nucb1 (ENSTNIG00000001833) ENSTNIG00000001835 ENSTNIG00000001836 ENSTNIG00000001837 cdipt (ENSTNIG00000001838) znf395b (ENSTNIG00000001839) ENSTNIG00000001840 ENSTNIG00000002241 ENSTNIG00000001842 ENSTNIG00000001843 sars1 (ENSTNIG00000001844) cul4b (ENSTNIG00000001845) ENSTNIG00000001846 Tetraodon MODERN SPECIES 26 ENSTNIG00000005075 ENSTNIG00000005076 hacd4 (ENSTNIG00000000968) trmt10a (ENSTNIG00000005077) slc1a1 (ENSTNIG00000005078) ENSTNIG00000005080 sema3b (ENSTNIG00000005081) zgc:136971 (ENSTNIG00000005082) ifrd2 (ENSTNIG00000002348) amt (ENSTNIG00000005083) hyal3 (ENSTNIG00000005084) ENSTNIG00000005086 hmgcs1 (ENSTNIG00000005102) ENSTNIG00000008388 #21 tln1 (ENSTNIG00000005103) #21 tpm2 (ENSTNIG00000005104) ##22 ENSTNIG00000001806 PURG (ENSTNIG00000001673) ENSTNIG00000005105 ENSTNIG00000004925 pmpcb (ENSTNIG00000005107) dnajc2 (ENSTNIG00000005108) psmc2 (ENSTNIG00000005109) slc26a5 (ENSTNIG00000005110) mecp2 (ENSTNIG00000005114) ENSTNIG00000005115 ENSTNIG00000005116 fxr2 (ENSTNIG00000005118) haus4 (ENSTNIG00000005119) dock11 (ENSTNIG00000005120) ENSTNIG00000000661 Otomorpha ANCESTRAL SPECIES 14 ENSGT00390000006753.A ENSGT00390000016654 ENSGT01050000244814.b.b ENSGT00940000159441.k ENSGT00940000177093 ENSGT00900000141074 ENSGT00900000141033.b.b ##30 ENSGT00940000156698.d ENSGT00390000015248 ENSGT00390000009464 ENSGT00940000157203.c ENSGT00390000002799 ENSGT00940000158423 ENSGT00940000157619.a.a ENSGT01030000234784 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00390000002049.d ENSGT00940000156893 ENSGT00390000018360.a ENSGT00390000011497 ENSGT00940000177218 ENSGT00950000183094.a.m ENSGT00940000159348 ENSGT00940000161136 ENSGT00940000154716.gc.a ENSGT01030000234515.a.b.a.a.f ENSGT00940000157585 ENSGT00940000157471.a ENSGT00940000164374.A.c.b ENSGT00940000154947.l ENSGT01060000248708.a Clupeiformes ANCESTRAL SPECIES 3 ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00940000157326 ENSGT00940000160287 ENSGT00940000156591 ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000155603.A.a.a.a ENSGT00950000182908.A ENSGT00940000159154 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00390000002049.d ENSGT00390000018878 ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000169704 ENSGT01030000234535.F.b ENSGT00940000156369 ENSGT00390000009048.a.b ENSGT00390000005782 ENSGT00940000153832 ENSGT00530000064469 ENSGT00940000158196 ENSGT00940000159053 ENSGT00940000157484 ENSGT00940000160540 Denticle herring MODERN SPECIES 13 ENSDCDG00000029749 PURG (ENSDCDG00000029747) WRN (ENSDCDG00000029742) nrg1 (ENSDCDG00000029736) fut10 (ENSDCDG00000029733) ENSDCDG00000028200 ENSDCDG00000028172 slc38a9 (ENSDCDG00000028127) ddx4 (ENSDCDG00000028102) ENSDCDG00000028086 il6st (ENSDCDG00000028074) ANKRD55 (ENSDCDG00000028065) MAP3K1 (ENSDCDG00000028034) hmgcs1 (ENSDCDG00000028016) tln1 (ENSDCDG00000026469) #21 tpm2 (ENSDCDG00000025300) ##22 zgc:114200 (ENSDCDG00000025188) ENSDCDG00000025186 dcp2 (ENSDCDG00000025185) reep5 (ENSDCDG00000025181) chd1 (ENSDCDG00000017181) st8sia4 (ENSDCDG00000017049) PAM (ENSDCDG00000011084) PPIP5K2 (ENSDCDG00000003744) macir (ENSDCDG00000003661) LYZ (ENSDCDG00000003660) ENSDCDG00000003658 DIRAS2 (ENSDCDG00000003655) syk (ENSDCDG00000003646) auh (ENSDCDG00000003628) nfil3 (ENSDCDG00000003627) Otophysi ANCESTRAL SPECIES 181 ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00940000157326 ENSGT00940000160287 ENSGT00940000156591 ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000155603.A.a.a.a ENSGT00950000182908.A ENSGT00940000159154 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00390000002049.d ENSGT00940000156893 ENSGT00390000018360.a ENSGT00390000018878 ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000169704 ENSGT01030000234535.F.b ENSGT00940000156369 ENSGT00390000009048.a.b ENSGT00390000005782 ENSGT00940000153832 ENSGT00530000064469 ENSGT00940000158196 ENSGT00940000159053 Cyprinoidei ANCESTRAL SPECIES 86 ENSGT00940000155167.b.a.a ENSGT00940000155167.b.b ENSGT00940000159374 ENSGT00940000159514 ENSGT00940000155778.B ENSGT00390000000420 ENSGT00940000157006.m #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00390000002049.d ENSGT00940000156893 ENSGT00390000018878 ENSGT00940000157873.c ENSGT00390000018360.a ENSGT00390000011497 ENSGT00950000183199.b ENSGT00940000157811.b.a ENSGT00940000156424.a ENSGT00940000155533.d ENSGT00940000154766.b ENSGT01020000230359.B.a ENSGT01020000230359.B.b ENSGT01020000230359.A ENSGT00530000063608.A Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a.e.a ##22 Goldfish MODERN SPECIES 28 sptlc1 (ENSCARG00000070455) ROR2 (ENSCARG00000070454) ENSCARG00000070453 nfil3 (ENSCARG00000070452) syk (ENSCARG00000070451) DIRAS2 (ENSCARG00000070449) ENSCARG00000070448 ENSCARG00000070447 st8sia4 (ENSCARG00000070446) PAM (ENSCARG00000070439) il6st (ENSCARG00000070421) ANKRD55 (ENSCARG00000070410) MAP3K1 (ENSCARG00000070388) hmgcs1 (ENSCARG00000070381) tln1 (ENSCARG00000070364) #21 tpm2 (ENSCARG00000070351) ##22 zgc:114200 (ENSCARG00000070349) ENSCARG00000070344 dcp2 (ENSCARG00000070342) reep5 (ENSCARG00000070341) chd1 (ENSCARG00000070202) ENSCARG00000070149 PPIP5K2 (ENSCARG00000069779) ENSCARG00000069644 ddx4 (ENSCARG00000069508) slc38a9 (ENSCARG00000069375) ENSCARG00000069326 ENSCARG00000069321 ENSCARG00000069061 fut10 (ENSCARG00000069003) ENSCARG00000068998 Cyprininae_a ANCESTRAL SPECIES 298 ENSGT00940000153947.A.e ENSGT00940000160540 ENSGT00940000157484.t ENSGT00940000157484.s ENSGT00950000182908.A.d ENSGT00940000155603.A.a.a.a.n ENSGT00940000156369.h ENSGT01030000234535.F.b.b ENSGT00530000064469.c.a ENSGT00940000158196 ENSGT00940000159053.b ENSGT00950000182908.A.c ENSGT00940000159154 ENSGT00390000006096.a.b ENSGT00940000157006.m.b #21 ENSGT01030000234542.b.b.a.a.a.a.e.a ##22 ENSGT00390000002049.d.d ENSGT00940000156893.lb.a ENSGT00390000018878.k ENSGT00940000157873.c.b Common carp reference MODERN SPECIES 24 SPTLC1 (ENSCCRG00000009276) ROR2 (ENSCCRG00000060844) nfil3 (ENSCCRG00000067998) ENSCCRG00000000897 AUH (ENSCCRG00000079592) ENSCCRG00000049609 il6st (ENSCCRG00000014461) ENSCCRG00000003183 st8sia4 (ENSCCRG00000002848) ENSCCRG00000002819 ENSCCRG00000080052 syk (ENSCCRG00000002622) ENSCCRG00000008655 hmgcs1 (ENSCCRG00000082677) tln1 (ENSCCRG00000047910) #21 tpm2 (ENSCCRG00000077616) ##22 zgc:114200 (ENSCCRG00000058903) ENSCCRG00000040153 dcp2 (ENSCCRG00000040144) reep5 (ENSCCRG00000001606) chd1 (ENSCCRG00000046162) macir (ENSCCRG00000065620) ENSCCRG00000017343 ddx4 (ENSCCRG00000058075) slc38a9 (ENSCCRG00000001877) ENSCCRG00000028490 ENSCCRG00000026422 nrg1 (ENSCCRG00000066021) WRN (ENSCCRG00000078009) ENSCCRG00000019977 ppp2cb (ENSCCRG00000019969) Cyprininae ANCESTRAL SPECIES 186 ENSGT00940000175401 ENSGT00940000160540 ENSGT00940000157484.s ENSGT00950000182908.A.d ENSGT00940000155603.A.a.a.a.n ENSGT00940000156369.h ENSGT01030000234535.F.b.b ENSGT00530000064469.c.a ENSGT00530000064469.c.b ENSGT00940000158196 ENSGT00940000159053.b ENSGT00950000182908.A.c ENSGT00940000159154 ENSGT00390000006096.a.b ENSGT00940000157006.m #21 ENSGT01030000234542.b.b.a.a.a.a.e.b ##22 ENSGT00390000002049.d.d ENSGT00940000156893.lb.a ENSGT00390000018878.k ENSGT00940000157873.c.b ENSGT00940000157873.d ENSGT00940000156579 ENSGT00390000005782 ENSGT00390000009048.a.b.c.b ENSGT00940000157507.e.a ENSGT00390000009048.a.b.c.a ENSGT00940000157507.e.b ENSGT00390000005646 ENSGT00940000157357.f.c ENSGT00940000156591.mb.b ENSGT00940000160287 Cyprininae_a ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a.e.b ##22 Common carp reference MODERN SPECIES 32 sec31a (ENSCCRG00000009144) sptlc1 (ENSCCRG00000073416) ROR2 (ENSCCRG00000058752) ENSCCRG00000000251 nfil3 (ENSCCRG00000069614) auh (ENSCCRG00000058814) syk (ENSCCRG00000053057) DIRAS2 (ENSCCRG00000056500) st8sia4 (ENSCCRG00000009416) ENSCCRG00000009425 il6st (ENSCCRG00000074828) ENSCCRG00000045181 ENSCCRG00000008706 hmgcs1 (ENSCCRG00000049931) tln1 (ENSCCRG00000023720) #21 tpm2 (ENSCCRG00000002022) ##22 zgc:114200 (ENSCCRG00000002403) ENSCCRG00000007358 ENSCCRG00000065263 dcp2 (ENSCCRG00000002409) reep5 (ENSCCRG00000054338) chd1 (ENSCCRG00000003831) macir (ENSCCRG00000056900) ENSCCRG00000002436 ddx4 (ENSCCRG00000066597) slc38a9 (ENSCCRG00000027384) ENSCCRG00000029325 ENSCCRG00000075712 nrg1 (ENSCCRG00000009709) ENSCCRG00000066656 ppp2cb (ENSCCRG00000076481) Goldfish MODERN SPECIES 1 ROR2 (ENSCARG00000038857) nfil3 (ENSCARG00000038836) auh (ENSCARG00000038716) ANKRD55 (ENSCARG00000038605) il6st (ENSCARG00000038511) PAM (ENSCARG00000033111) st8sia4 (ENSCARG00000032903) ENSCARG00000032881 ENSCARG00000032893 ENSCARG00000032873 DIRAS2 (ENSCARG00000032864) syk (ENSCARG00000032674) MAP3K1 (ENSCARG00000032440) hmgcs1 (ENSCARG00000032343) tln1 (ENSCARG00000031215) #21 tpm2 (ENSCARG00000030269) ##22 zgc:114200 (ENSCARG00000030227) ENSCARG00000030221 dcp2 (ENSCARG00000030205) reep5 (ENSCARG00000030112) chd1 (ENSCARG00000029856) macir (ENSCARG00000029818) ENSCARG00000029754 smad2 (ENSCARG00000029739) skor2 (ENSCARG00000029735) ier3ip1 (ENSCARG00000029723) hdhd2 (ENSCARG00000029712) katnal2 (ENSCARG00000029666) ENSCARG00000029635 il21 (ENSCARG00000029620) cntfr (ENSCARG00000029572) Cyprininae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a.f ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.a.f ##22 Golden-line barbel MODERN SPECIES 1265 hmgcs1 (ENSSGRG00000030430) tln1 (ENSSGRG00000030699) #21 tpm2 (ENSSGRG00000035124) ##22 ENSSGRG00000035129 dcp2 (ENSSGRG00000035131) REEP5 (ENSSGRG00000035133) chd1 (ENSSGRG00000035190) ENSSGRG00000037970 Zebrafish MODERN SPECIES 1 sptlc1 (ENSDARG00000042995) ROR2 (ENSDARG00000076227) ENSDARG00000097088 nfil3 (ENSDARG00000042977) auh (ENSDARG00000042975) syk (ENSDARG00000008186) ENSDARG00000102251 st8sia4 (ENSDARG00000103600) PAM (ENSDARG00000100170) il6st (ENSDARG00000104693) ANKRD55 (ENSDARG00000099182) ENSDARG00000098133 MAP3K1 (ENSDARG00000098405) hmgcs1 (ENSDARG00000103025) tln1 (ENSDARG00000100729) #21 tpm2 (ENSDARG00000104682) ##22 zgc:114200 (ENSDARG00000100633) ENSDARG00000102300 dcp2 (ENSDARG00000104242) reep5 (ENSDARG00000100742) chd1 (ENSDARG00000103787) ENSDARG00000095927 ENSDARG00000095853 ENSDARG00000075780 ENSDARG00000095953 ENSDARG00000092740 ENSDARG00000078271 ENSDARG00000095884 ENSDARG00000095902 macir (ENSDARG00000093498) ENSDARG00000078441 Characiphysae ANCESTRAL SPECIES 46 ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00940000157326 ENSGT00940000160287 ENSGT00940000156591 ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000155603.A.a.a.a ENSGT00950000182908.A ENSGT00940000159154 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00390000002049.d ENSGT00940000156893 ENSGT00390000018360.a ENSGT00390000018878 ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000169704 ENSGT01030000234535.F.b ENSGT00940000156369 ENSGT00390000009048.a.b ENSGT00390000005782 ENSGT00940000153832 ENSGT00530000064469 ENSGT00940000158196 ENSGT00940000159053 Channel catfish MODERN SPECIES 7 ENSIPUG00000002147 PURG (ENSIPUG00000002143) wrn (ENSIPUG00000002090) nrg1 (ENSIPUG00000002044) fut10 (ENSIPUG00000002030) ENSIPUG00000002000 sh2d4a (ENSIPUG00000001970) slc38a9 (ENSIPUG00000001918) ddx4 (ENSIPUG00000001845) ENSIPUG00000001825 il6st (ENSIPUG00000001807) ANKRD55 (ENSIPUG00000001788) map3k1 (ENSIPUG00000001768) HMGCS1 (ENSIPUG00000001731) tln1 (ENSIPUG00000001654) #21 tpm2 (ENSIPUG00000001561) ##22 zgc:114200 (ENSIPUG00000001527) ENSIPUG00000001514 dcp2 (ENSIPUG00000001485) reep5 (ENSIPUG00000001450) ENSIPUG00000001443 chd1 (ENSIPUG00000001369) St8sia4 (ENSIPUG00000001344) pam (ENSIPUG00000001295) ppip5k2 (ENSIPUG00000001177) macir (ENSIPUG00000024986) lysc (ENSIPUG00000024982) ENSIPUG00000024978 Diras2 (ENSIPUG00000024977) syk (ENSIPUG00000024970) auh (ENSIPUG00000024969) Characiphysae_b ANCESTRAL SPECIES 19 ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00940000157326 ENSGT00940000160287 ENSGT00940000156591 ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000155603.A.a.a.a ENSGT00950000182908.A ENSGT00940000159154 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00390000002049.d ENSGT00940000156893 ENSGT00390000018360.a ENSGT00390000018878 ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000169704 ENSGT01030000234535.F.b ENSGT00940000156369 ENSGT00390000009048.a.b ENSGT00390000005782 ENSGT00940000153832 ENSGT00530000064469 ENSGT00940000158196 ENSGT00940000159053 Electric eel MODERN SPECIES 130 PSD3 (ENSEEEG00000020987) SH2D4A (ENSEEEG00000020984) slc38a9 (ENSEEEG00000020946) ddx4 (ENSEEEG00000020926) ENSEEEG00000020922 ENSEEEG00000020921 il6st (ENSEEEG00000020919) ANKRD55 (ENSEEEG00000020917) MAP3K1 (ENSEEEG00000020908) hmgcs1 (ENSEEEG00000020904) tln1 (ENSEEEG00000020656) #21 tpm2 (ENSEEEG00000020339) ##22 zgc:114200 (ENSEEEG00000020311) ENSEEEG00000020310 dcp2 (ENSEEEG00000020309) reep5 (ENSEEEG00000020293) ENSEEEG00000019944 st8sia4 (ENSEEEG00000019917) PAM (ENSEEEG00000019915) macir (ENSEEEG00000019868) LYZ (ENSEEEG00000019823) ENSEEEG00000019817 ENSEEEG00000019814 DIRAS2 (ENSEEEG00000019813) syk (ENSEEEG00000019803) auh (ENSEEEG00000019785) nfil3 (ENSEEEG00000019782) Characoidei ANCESTRAL SPECIES 11 ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00940000157326 ENSGT00940000160287 ENSGT00940000156591 ENSGT00940000157357.f ENSGT00390000005646 ENSGT00940000157507 ENSGT00940000155603.A.b.d ENSGT00940000155603.A.a.a.a ENSGT00950000182908.A ENSGT00940000159154 ENSGT00390000006096.a.b ENSGT00940000157006 #21 ENSGT01030000234542.b.b.a.a.a.a ##22 ENSGT00390000002049.d ENSGT00390000018878 ENSGT00940000157873 ENSGT00940000156579 ENSGT00940000169704 ENSGT01030000234535.F.b ENSGT00940000156369 ENSGT00390000009048.a.b ENSGT00390000005782 ENSGT00940000153832.eb.a ENSGT00940000153832.eb.b.a ENSGT00530000064469 ENSGT00940000158196 ENSGT00940000159053 ENSGT00940000157484 Red-bellied piranha MODERN SPECIES 49 WRN (ENSPNAG00000021848) nrg1 (ENSPNAG00000021823) ENSPNAG00000021650 fut10 (ENSPNAG00000021635) ENSPNAG00000021622 ENSPNAG00000021581 slc38a9 (ENSPNAG00000021563) ddx4 (ENSPNAG00000003686) ENSPNAG00000021495 il6st (ENSPNAG00000021433) ANKRD55 (ENSPNAG00000003682) MAP3K1 (ENSPNAG00000006470) hmgcs1 (ENSPNAG00000021331) tln1 (ENSPNAG00000021273) #21 ENSPNAG00000021120 ##22 tpm2 (ENSPNAG00000005584) ##22 zgc:114200 (ENSPNAG00000021057) ENSPNAG00000021022 dcp2 (ENSPNAG00000021008) reep5 (ENSPNAG00000020973) chd1 (ENSPNAG00000020956) ENSPNAG00000020862 st8sia4 (ENSPNAG00000020852) PAM (ENSPNAG00000020822) PPIP5K2 (ENSPNAG00000020717) macir (ENSPNAG00000020298) LYZ (ENSPNAG00000020289) ENSPNAG00000020276 ENSPNAG00000020256 ENSPNAG00000020238 ENSPNAG00000020192 Mexicana tetra MODERN SPECIES 12 nrg1 (ENSAMXG00000032216) fut10 (ENSAMXG00000031008) ENSAMXG00000010171 ENSAMXG00000031392 ENSAMXG00000042855 SH2D4A (ENSAMXG00000034670) slc38a9 (ENSAMXG00000010243) ddx4 (ENSAMXG00000010288) ENSAMXG00000010329 il6st (ENSAMXG00000040431) ANKRD55 (ENSAMXG00000010411) ENSAMXG00000030022 MAP3K1 (ENSAMXG00000010510) hmgcs1 (ENSAMXG00000039120) tln1 (ENSAMXG00000010531) #21 tpm2 (ENSAMXG00000010165) ##22 ENSAMXG00000038469 mat2al (ENSAMXG00000001449) si:ch73-234b20.5 (ENSAMXG00000001464) hnrnpd (ENSAMXG00000001477) hnrnpdl (ENSAMXG00000001495) enoph1 (ENSAMXG00000035397) TMEM150C (ENSAMXG00000001521) SCD5 (ENSAMXG00000036335) sec31a (ENSAMXG00000001550) snx30 (ENSAMXG00000032117) SLC46A2 (ENSAMXG00000021281) ENSAMXG00000043048 ENSAMXG00000033093 PLPPR1 (ENSAMXG00000021269) GRIN3A (ENSAMXG00000021254) Vertebrata ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b ##22 Cyclostomata ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b ##22 Lamprey MODERN SPECIES 3381 ENSPMAG00000008509 ##22 lactb (ENSPMAG00000008513) Gnathostomata ANCESTRAL SPECIES 127 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495 ENSGT00940000155438.b ENSGT00390000012078.a.a ENSGT00950000182915.b.b.a.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00940000172353 ENSGT00390000018845.f ENSGT00940000155916 ENSGT00940000165061 ENSGT00940000157178 ENSGT01030000234542.b.b.a.a.a.b ##22 Elephant shark MODERN SPECIES 1570 cherp (ENSCMIG00000018250) ENSCMIG00000018240 slc35e1 (ENSCMIG00000018239) MED26 (ENSCMIG00000018238) ENSCMIG00000018235 tmem38a (ENSCMIG00000018233) ENSCMIG00000018232 ENSCMIG00000018230 SAFB (ENSCMIG00000018220) ENSCMIG00000018217 ENSCMIG00000018214 ENSCMIG00000018211 ENSCMIG00000018208 ENSCMIG00000018207 lpl (ENSCMIG00000018205) tpm4a (ENSCMIG00000018088) ##22 ENSCMIG00000017983 ENSCMIG00000017967 ENSCMIG00000017966 ENSCMIG00000017965 ptbp1b (ENSCMIG00000017861) wdr55 (ENSCMIG00000017792) ENSCMIG00000017783 tax1bp3 (ENSCMIG00000017776) ctns (ENSCMIG00000017768) CIB3 (ENSCMIG00000017766) ENSCMIG00000017764 ENSCMIG00000017762 acsbg2 (ENSCMIG00000017738) mllt1b (ENSCMIG00000017728) acer1 (ENSCMIG00000017723) Euteleostomi ANCESTRAL SPECIES 103 ENSGT00390000000259 ENSGT00940000159007 ENSGT00730000111147 ENSGT00390000002505 ENSGT00950000182915.b.b.a.b ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495 ENSGT00940000157924 ENSGT00390000013811 ENSGT01090000261062 ENSGT00940000155916 ENSGT00940000165061 ENSGT00940000166556 ENSGT00940000157178 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000002877 ENSGT00390000005338 Sarcopterygii ANCESTRAL SPECIES 135 ENSGT00940000161635 ENSGT00940000165051 ENSGT00390000018845.f ENSGT00390000014626 ENSGT00390000000259 ENSGT00940000159007 ENSGT00730000111147 ENSGT00390000002505 ENSGT00950000182915.b.b.a.b ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495 ENSGT00940000157924 ENSGT00390000013811 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000002877 ENSGT00390000005338 Tetrapoda ANCESTRAL SPECIES 116 ENSGT01050000244840.A.b.a ENSGT00940000159560 ENSGT00940000161635 ENSGT00940000165051 ENSGT00390000018845.f ENSGT00390000014626 ENSGT00390000000259 ENSGT00940000159007 ENSGT00730000111147 ENSGT00390000002505 ENSGT00940000155438.b ENSGT00940000164495 ENSGT00940000157924 ENSGT00390000013811 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 Anura ANCESTRAL SPECIES 308 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000157413 Leishan spiny toad MODERN SPECIES TMEM161A (ENSLLEG00000023032) MEF2B (ENSLLEG00000022939) ENSLLEG00000022900 BORCS8 (ENSLLEG00000022858) RFXANK (ENSLLEG00000022726) NR2C2AP (ENSLLEG00000022668) ENSLLEG00000022604 ENSLLEG00000022581 NCAN (ENSLLEG00000022173) HAPLN4 (ENSLLEG00000022101) TM6SF2 (ENSLLEG00000021856) SUGP1 (ENSLLEG00000021601) MAU2 (ENSLLEG00000021086) GATAD2A (ENSLLEG00000020909) ENSLLEG00000020874 TPM4 (ENSLLEG00000020308) ##22 RAB8A (ENSLLEG00000020123) ENSLLEG00000020029 CIB3 (ENSLLEG00000019959) AP1M1 (ENSLLEG00000018290) UPF1 (ENSLLEG00000017156) ENSLLEG00000017036 ENSLLEG00000017004 ENSLLEG00000016967 ENSLLEG00000016943 ENSLLEG00000016656 ENSLLEG00000016620 ENSLLEG00000016594 ENSLLEG00000016568 ENSLLEG00000016552 ENSLLEG00000016514 Frog MODERN SPECIES lsm4 (ENSXETG00000024933) pde4c (ENSXETG00000012922) rab3a (ENSXETG00000038978) ENSXETG00000044189 ENSXETG00000041211 mpv17l2 (ENSXETG00000018317) ifi30 (ENSXETG00000025512) pik3r2 (ENSXETG00000012933) mast3 (ENSXETG00000012935) ENSXETG00000047217 gna15 (ENSXETG00000008714) gzmh (ENSXETG00000008719) fam32a (ENSXETG00000031043) cib3 (ENSXETG00000008733) hsh2d (ENSXETG00000038049) tpm4 (ENSXETG00000008736) ##22 rab8a (ENSXETG00000042455) pnhd (ENSXETG00000025525) admp (ENSXETG00000008743) ENSXETG00000025527 elavl1 (ENSXETG00000008752) ENSXETG00000032639 mhc100494167 (ENSXETG00000039951) pram1 (ENSXETG00000034970) eif4g2 (ENSXETG00000008755) crygdl.1 (ENSXETG00000042110) ENSXETG00000037040 ENSXETG00000046463 ENSXETG00000044728 ENSXETG00000045994 crygdl.6 (ENSXETG00000033781) Amniota ANCESTRAL SPECIES 23 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000165051 Sauria ANCESTRAL SPECIES 20 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000165051 ENSGT00940000161635 Lepidosauria ANCESTRAL SPECIES 35 ENSGT00940000160466 ENSGT00390000013811 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000157924 ENSGT00940000164495 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000165051 ENSGT00940000161635 ENSGT00940000159560 ENSGT01050000244840.A.b.a tuatara MODERN SPECIES 902 ENSSPUG00000014671 MATK (ENSSPUG00000014708) ENSSPUG00000014817 ENSSPUG00000014824 ENSSPUG00000014836 TPM4 (ENSSPUG00000014862) ##22 ENSSPUG00000014974 Episquamata ANCESTRAL SPECIES 26 ENSGT00940000162399 ENSGT01050000244840.A.b.a ENSGT00940000159560 ENSGT00940000161635 ENSGT00940000165051 ENSGT00390000018845.f ENSGT00390000014626 ENSGT00390000000259 ENSGT00940000159007 ENSGT00730000111147 ENSGT00390000002505 ENSGT00950000182915.b.b.b.b ENSGT00940000155438.b ENSGT00940000164495 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00390000013811 ENSGT00940000157246 ENSGT00940000157924 Toxicofera ANCESTRAL SPECIES 53 ENSGT00390000010450 ENSGT00940000162399 ENSGT01050000244840.A.b.a ENSGT00940000159560 ENSGT00940000161635 ENSGT00390000018845.f ENSGT00390000014626 ENSGT00390000000259 ENSGT00940000159007 ENSGT00730000111147 ENSGT00390000002505 ENSGT00950000182915.b.b.b.b ENSGT00940000155438.b ENSGT00940000164495 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00390000013811 ENSGT00940000157246 ENSGT00940000157924 Lizard MODERN SPECIES 98 ENSACAG00000039099 ##22 Elapidae ANCESTRAL SPECIES 3 ENSGT00390000010450 ENSGT00940000162399 ENSGT01050000244840.A.b.a ENSGT00940000159560 ENSGT00940000161635 ENSGT00390000018845.f ENSGT00390000014626 ENSGT00390000000259 ENSGT00940000159007 ENSGT00730000111147 ENSGT00390000002505 ENSGT00950000182915.b.b.b.b ENSGT00940000155438.b ENSGT00940000164495 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00390000013811 ENSGT00940000157246 ENSGT00940000157924 ENSGT00940000161265 ENSGT00940000155736.D.c.b ENSGT00940000156000 ENSGT00390000014666.b ENSGT00940000156697 ENSGT00390000011381 ENSGT00950000183197.a ENSGT00940000158296 ENSGT00940000155959 ENSGT00940000158586 ENSGT00940000158712 ENSGT00390000005033 Indian cobra MODERN SPECIES IFI30 (ENSNNAG00000006921) CPAMD8 (ENSNNAG00000006789) F2RL3 (ENSNNAG00000006751) SIN3B (ENSNNAG00000006265) NWD1 (ENSNNAG00000006059) TMEM38A (ENSNNAG00000006014) SMIM7 (ENSNNAG00000005990) MED26 (ENSNNAG00000005983) SLC35E1 (ENSNNAG00000005958) CHERP (ENSNNAG00000005709) ENSNNAG00000005659 CALR3 (ENSNNAG00000005559) EPS15L1 (ENSNNAG00000005344) ENSNNAG00000005296 ENSNNAG00000005285 ##22 ENSNNAG00000005262 ##22 FAM32A (ENSNNAG00000005236) ENSNNAG00000005213 AP1M1 (ENSNNAG00000005186) DNAL4 (ENSNNAG00000005165) ENSNNAG00000005147 CWF19L1 (ENSNNAG00000005113) ERLIN1 (ENSNNAG00000005087) TUBGCP2 (ENSNNAG00000005043) ZNF511 (ENSNNAG00000005032) CYB561 (ENSNNAG00000004990) LRFN5 (ENSNNAG00000004968) TMX1 (ENSNNAG00000004938) KLHL28 (ENSNNAG00000004915) TOGARAM1 (ENSNNAG00000004817) PRPF39 (ENSNNAG00000010118) Elapidae_a ANCESTRAL SPECIES 10 ENSGT00390000010450 ENSGT00940000162399 ENSGT01050000244840.A.b.a ENSGT00940000159560 ENSGT00940000161635 ENSGT00390000018845.f ENSGT00390000014626 ENSGT00390000000259 ENSGT00940000159007 ENSGT00730000111147 ENSGT00390000002505 ENSGT00950000182915.b.b.b.b ENSGT00940000155438.b ENSGT00940000164495 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00390000013811 ENSGT00940000157246 ENSGT00940000157924 ENSGT00940000161265 ENSGT00940000155736.D.c.b ENSGT00940000156000 ENSGT00390000014666.b ENSGT00940000156697 ENSGT00390000011381 ENSGT00950000183197.a ENSGT00940000158296 ENSGT00940000155959 ENSGT00940000158586 ENSGT00940000158712 ENSGT00390000005033 Blue-lipped sea krait MODERN SPECIES 3316 ENSLLTG00000018278 ##22 FAM32A (ENSLLTG00000018275) ENSLLTG00000018273 AP1M1 (ENSLLTG00000018270) DNAL4 (ENSLLTG00000018266) ENSLLTG00000018264 Acanthophiinae ANCESTRAL SPECIES 13 ENSGT00390000010450 ENSGT00940000162399 ENSGT01050000244840.A.b.a ENSGT00940000159560 ENSGT00940000161635 ENSGT00390000018845.f ENSGT00390000014626 ENSGT00390000000259 ENSGT00940000159007 ENSGT00730000111147 ENSGT00390000002505 ENSGT00950000182915.b.b.b.b ENSGT00940000155438.b ENSGT00940000164495 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00390000013811 ENSGT00940000157246 ENSGT00940000157924 ENSGT00940000161265 ENSGT00940000155736.D.c.b ENSGT00940000156000 ENSGT00390000014666.b ENSGT00940000156697 ENSGT00390000011381 ENSGT00950000183197.a ENSGT00940000158296 ENSGT00940000155959 ENSGT00940000158586 ENSGT00940000158712 ENSGT00390000005033 Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 10 PIK3R2 (ENSPTXG00000002028) ENSPTXG00000002023 CPAMD8 (ENSPTXG00000002017) F2RL3 (ENSPTXG00000002015) SIN3B (ENSPTXG00000002012) NWD1 (ENSPTXG00000002008) TMEM38A (ENSPTXG00000002007) SMIM7 (ENSPTXG00000002005) MED26 (ENSPTXG00000002002) SLC35E1 (ENSPTXG00000002000) CHERP (ENSPTXG00000001995) CALR3 (ENSPTXG00000001988) EPS15L1 (ENSPTXG00000001534) ENSPTXG00000001470 ENSPTXG00000001468 ##22 ENSPTXG00000001467 ##22 FAM32A (ENSPTXG00000001464) ENSPTXG00000001459 AP1M1 (ENSPTXG00000001454) DNAL4 (ENSPTXG00000001449) ENSPTXG00000000603 CWF19L1 (ENSPTXG00000000484) ERLIN1 (ENSPTXG00000000470) TUBGCP2 (ENSPTXG00000000447) ZNF511 (ENSPTXG00000000437) CYB561 (ENSPTXG00000000423) ENSPTXG00000000417 LRFN5 (ENSPTXG00000000392) TMX1 (ENSPTXG00000000371) KLHL28 (ENSPTXG00000000359) TOGARAM1 (ENSPTXG00000000260) Eastern brown snake MODERN SPECIES 10 ARRDC2 (ENSPTXG00000002066) PIK3R2 (ENSPTXG00000002028) ENSPTXG00000002023 CPAMD8 (ENSPTXG00000002017) F2RL3 (ENSPTXG00000002015) SIN3B (ENSPTXG00000002012) NWD1 (ENSPTXG00000002008) TMEM38A (ENSPTXG00000002007) SMIM7 (ENSPTXG00000002005) MED26 (ENSPTXG00000002002) SLC35E1 (ENSPTXG00000002000) CHERP (ENSPTXG00000001995) CALR3 (ENSPTXG00000001988) EPS15L1 (ENSPTXG00000001534) ENSPTXG00000001470 ENSPTXG00000001468 ##22 ENSPTXG00000001467 ##22 FAM32A (ENSPTXG00000001464) ENSPTXG00000001459 AP1M1 (ENSPTXG00000001454) DNAL4 (ENSPTXG00000001449) ENSPTXG00000000603 CWF19L1 (ENSPTXG00000000484) ERLIN1 (ENSPTXG00000000470) TUBGCP2 (ENSPTXG00000000447) ZNF511 (ENSPTXG00000000437) CYB561 (ENSPTXG00000000423) ENSPTXG00000000417 LRFN5 (ENSPTXG00000000392) TMX1 (ENSPTXG00000000371) KLHL28 (ENSPTXG00000000359) Mainland tiger snake MODERN SPECIES 35 ENSNSUG00000016103 F2RL3 (ENSNSUG00000016102) SIN3B (ENSNSUG00000016100) NWD1 (ENSNSUG00000016098) TMEM38A (ENSNSUG00000016095) SMIM7 (ENSNSUG00000016093) MED26 (ENSNSUG00000016091) SLC35E1 (ENSNSUG00000016089) CHERP (ENSNSUG00000016084) ENSNSUG00000016083 CALR3 (ENSNSUG00000016082) ENSNSUG00000016081 ENSNSUG00000016080 ENSNSUG00000016079 ENSNSUG00000016077 ##22 ENSNSUG00000016076 ##22 FAM32A (ENSNSUG00000016075) ENSNSUG00000016073 AP1M1 (ENSNSUG00000016071) DNAL4 (ENSNSUG00000016067) ENSNSUG00000015654 ENSNSUG00000015653 ERLIN1 (ENSNSUG00000015652) TUBGCP2 (ENSNSUG00000015382) ZNF511 (ENSNSUG00000015381) CYB561 (ENSNSUG00000015372) LRFN5 (ENSNSUG00000015371) TMX1 (ENSNSUG00000015369) KLHL28 (ENSNSUG00000015368) TOGARAM1 (ENSNSUG00000015367) PRPF39 (ENSNSUG00000015235) Laterata ANCESTRAL SPECIES 47 ENSGT00940000162399 ENSGT01050000244840.A.b.a ENSGT00940000159560 ENSGT00940000161635 ENSGT00940000165051 ENSGT00390000018845.f ENSGT00390000014626 ENSGT00390000000259 ENSGT00940000159007 ENSGT00730000111147 ENSGT00390000002505 ENSGT00950000182915.b.b.b.b ENSGT00940000155438.b ENSGT00940000163163 ENSGT01030000234542.b.a.a.b.a.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00390000013811 ENSGT00940000157246 ENSGT00940000157924 Argentine black and white tegu MODERN SPECIES 174 IFI30 (ENSSMRG00000006090) CPAMD8 (ENSSMRG00000006096) F2RL3 (ENSSMRG00000006109) SIN3B (ENSSMRG00000006110) NWD1 (ENSSMRG00000006115) ENSSMRG00000006120 TMEM38A (ENSSMRG00000006123) SMIM7 (ENSSMRG00000006124) MED26 (ENSSMRG00000006127) SLC35E1 (ENSSMRG00000006128) CHERP (ENSSMRG00000006130) ENSSMRG00000006252 CALR3 (ENSSMRG00000006258) EPS15L1 (ENSSMRG00000006564) KLF2 (ENSSMRG00000006861) TPM4 (ENSSMRG00000006865) ##22 FAM32A (ENSSMRG00000006871) RAB8A (ENSSMRG00000006878) AP1M1 (ENSSMRG00000006886) Common wall lizard MODERN SPECIES 9 PTBP1 (ENSPMRG00000023419) ENSPMRG00000023423 ENSPMRG00000023426 ENSPMRG00000023427 SIRT6 (ENSPMRG00000023429) NWD1 (ENSPMRG00000023432) TMEM38A (ENSPMRG00000023436) SMIM7 (ENSPMRG00000023440) MED26 (ENSPMRG00000023442) SLC35E1 (ENSPMRG00000023447) CHERP (ENSPMRG00000023459) CALR3 (ENSPMRG00000023490) EPS15L1 (ENSPMRG00000023544) KLF2 (ENSPMRG00000023600) ENSPMRG00000023603 ##22 TPM4 (ENSPMRG00000023606) ##22 FAM32A (ENSPMRG00000023607) TIMM13 (ENSPMRG00000023609) RAB8A (ENSPMRG00000023613) AP1M1 (ENSPMRG00000021002) ELAVL1 (ENSPMRG00000021014) ENSPMRG00000021020 ENSPMRG00000021046 SIN3B (ENSPMRG00000021102) F2RL3 (ENSPMRG00000021328) CPAMD8 (ENSPMRG00000021337) ENSPMRG00000021360 PIK3R2 (ENSPMRG00000021395) ENSPMRG00000021568 MAST3 (ENSPMRG00000021572) ARRDC2 (ENSPMRG00000021585) Archelosauria ANCESTRAL SPECIES 20 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000165051 ENSGT00940000161635 Archosauria ANCESTRAL SPECIES 16 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000165051 ENSGT00940000161635 Australian saltwater crocodile MODERN SPECIES 3 ENSCPRG00005017840 ##22 TPM4 (ENSCPRG00005017805) ##22 RAB8A (ENSCPRG00005017794) CIB3 (ENSCPRG00005017792) AP1M1 (ENSCPRG00005017788) ENSCPRG00005017785 EPS15L1 (ENSCPRG00005017291) CALR3 (ENSCPRG00005017190) C19orf44 (ENSCPRG00005017188) CHERP (ENSCPRG00005017109) SLC35E1 (ENSCPRG00005017079) MED26 (ENSCPRG00005017077) ENSCPRG00005017074 TMEM38A (ENSCPRG00005017069) ENSCPRG00005017068 NWD1 (ENSCPRG00005017060) SIN3B (ENSCPRG00005017017) Aves ANCESTRAL SPECIES 20 ENSGT00940000165355 ENSGT00940000159170 ENSGT00390000003488.a.b.a ENSGT00390000000777 ENSGT00940000167025 ENSGT00940000158174 ENSGT00940000161210 ENSGT00940000162411 ENSGT00950000182920.b.a.a.c.b ENSGT00390000008296.a ENSGT00940000159248 ENSGT00940000153617.A.b ENSGT00940000163061.a.b.b.a ENSGT00960000189368 ENSGT01010000222912 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 ENSGT00940000159560 African ostrich MODERN SPECIES 180 TNFAIP8L1 (ENSSCUG00000001834) DPP9 (ENSSCUG00000001836) FEM1A (ENSSCUG00000001842) UHRF1 (ENSSCUG00000001846) TICAM1 (ENSSCUG00000001854) ENSSCUG00000001856 ENSSCUG00000001857 ENSSCUG00000001860 PTPRS (ENSSCUG00000001866) ENSSCUG00000001869 ENSSCUG00000001874 ENSSCUG00000001875 TPM4 (ENSSCUG00000001881) ##22 ENSSCUG00000001883 RAB8A (ENSSCUG00000001886) CIB3 (ENSSCUG00000001888) AP1M1 (ENSSCUG00000001891) ENSSCUG00000001893 EPS15L1 (ENSSCUG00000001905) CALR3 (ENSSCUG00000001962) ENSSCUG00000001965 CHERP (ENSSCUG00000001967) SLC35E1 (ENSSCUG00000001971) MED26 (ENSSCUG00000001974) SMIM7 (ENSSCUG00000001978) TMEM38A (ENSSCUG00000001980) NWD1 (ENSSCUG00000001988) SIN3B (ENSSCUG00000002001) Neognathae ANCESTRAL SPECIES 21 ENSGT00940000165355 ENSGT00940000159170 ENSGT00390000003488.a.b.a ENSGT00390000000777 ENSGT00940000167025 ENSGT00940000158174 ENSGT00940000161210 ENSGT00940000162411 ENSGT00950000182920.b.a.a.c.b ENSGT00390000008296.a ENSGT00940000159248 ENSGT00940000153617.A.b ENSGT00940000163061.a.b.b.a ENSGT00960000189368 ENSGT01010000222912 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 ENSGT00940000159560 Galloanserae ANCESTRAL SPECIES 20 ENSGT00940000165355 ENSGT00940000159170 ENSGT00390000003488.a.b.a ENSGT00390000000777 ENSGT00940000167025 ENSGT00940000158174 ENSGT00940000161210 ENSGT00940000162411 ENSGT00950000182920.b.a.a.c.b ENSGT00390000008296.a ENSGT00940000159248 ENSGT00940000153617.A.b ENSGT00940000163061.a.b.b.a ENSGT00960000189368 ENSGT01010000222912 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 ENSGT00940000159560 Anatidae ANCESTRAL SPECIES 62 ENSGT00950000182920.b.a.a.d.d.b ENSGT00940000165355 ENSGT00390000003488.a.b.a ENSGT00390000000777 ENSGT00940000167025 ENSGT00940000158174 ENSGT00940000161210 ENSGT00940000162411 ENSGT00950000182920.b.a.a.c.b ENSGT00390000008296.a ENSGT00940000159248 ENSGT00940000153617.A.b ENSGT00940000163061.a.b.b.a ENSGT00960000189368 ENSGT01010000222912 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 ENSGT00940000159560 Pink-footed goose MODERN SPECIES 221 TNFAIP8L1 (ENSABRG00000018564) MYDGF (ENSABRG00000018559) ENSABRG00000018556 DPP9 (ENSABRG00000018550) TICAM1 (ENSABRG00000018545) ENSABRG00000018539 UHRF1 (ENSABRG00000018532) KDM4B (ENSABRG00000018524) PTPRS (ENSABRG00000016587) ENSABRG00000016332 ENSABRG00000016325 ENSABRG00000016320 ENSABRG00000016315 TPM4 (ENSABRG00000015608) ##22 RAB8A (ENSABRG00000015512) CIB3 (ENSABRG00000015507) FAM32A (ENSABRG00000015504) AP1M1 (ENSABRG00000015258) ENSABRG00000015228 EPS15L1 (ENSABRG00000012667) CALR3 (ENSABRG00000012473) ENSABRG00000012464 CHERP (ENSABRG00000012412) SLC35E1 (ENSABRG00000012348) MED26 (ENSABRG00000012342) SMIM7 (ENSABRG00000012337) TMEM38A (ENSABRG00000012328) NWD1 (ENSABRG00000012111) SIN3B (ENSABRG00000012013) Duck MODERN SPECIES 20 EEF2 (ENSAPLG00000010503) PIAS4 (ENSAPLG00000010840) SH3GL1 (ENSAPLG00000002520) CHAF1A (ENSAPLG00000008289) ENSAPLG00000007778 ENSAPLG00000022793 TNFAIP8L1 (ENSAPLG00000013525) DPP9 (ENSAPLG00000013927) FEM1A (ENSAPLG00000000639) UHRF1 (ENSAPLG00000014609) KDM4B (ENSAPLG00000005013) PTPRS (ENSAPLG00000005364) ENSAPLG00000018427 ENSAPLG00000030175 ENSAPLG00000020730 TPM4 (ENSAPLG00000027602) ##22 RAB8A (ENSAPLG00000008784) CIB3 (ENSAPLG00000008953) FAM32A (ENSAPLG00000009058) AP1M1 (ENSAPLG00000009067) ENSAPLG00000009602 EPS15L1 (ENSAPLG00000009655) CALR3 (ENSAPLG00000010728) C19orf44 (ENSAPLG00000010741) CHERP (ENSAPLG00000010773) SLC35E1 (ENSAPLG00000011233) MED26 (ENSAPLG00000011240) TMEM38A (ENSAPLG00000024207) SIN3B (ENSAPLG00000011724) F2RL3 (ENSAPLG00000012122) ENSAPLG00000012206 Phasianidae ANCESTRAL SPECIES 19 ENSGT00390000003488.a.b.a ENSGT00390000000777 ENSGT00940000167025 ENSGT00940000158174 ENSGT00940000161210 ENSGT00940000162411 ENSGT00950000182920.b.a.a.c.b ENSGT00390000008296.a ENSGT00940000159248 ENSGT00940000153617.A.b ENSGT00940000163061.a.b.b.a ENSGT00960000189368 ENSGT01010000222912 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000159560 ENSGT01050000244840.A.b.a Japanese quail MODERN SPECIES 20 TNFAIP8L1 (ENSCJPG00005017856) MYDGF (ENSCJPG00005017855) ENSCJPG00005017854 DPP9 (ENSCJPG00005017853) ENSCJPG00005017851 UHRF1 (ENSCJPG00005017850) KDM4B (ENSCJPG00005017847) PTPRS (ENSCJPG00005015440) ENSCJPG00005015432 ENSCJPG00005015431 TPM4 (ENSCJPG00005015429) ##22 RAB8A (ENSCJPG00005015428) CIB3 (ENSCJPG00005015427) FAM32A (ENSCJPG00005015426) AP1M1 (ENSCJPG00005015181) ENSCJPG00005015176 EPS15L1 (ENSCJPG00005013902) CALR3 (ENSCJPG00005013885) C19orf44 (ENSCJPG00005013884) CHERP (ENSCJPG00005013883) SLC35E1 (ENSCJPG00005013880) MED26 (ENSCJPG00005013873) SMIM7 (ENSCJPG00005013871) TMEM38A (ENSCJPG00005013869) SIN3B (ENSCJPG00005013686) F2RL3 (ENSCJPG00005013685) Phasianidae_b ANCESTRAL SPECIES 20 ENSGT00390000003488.a.b.a ENSGT00390000000777 ENSGT00940000167025 ENSGT00940000158174 ENSGT00940000161210 ENSGT00940000162411 ENSGT00950000182920.b.a.a.c.b ENSGT00390000008296.a ENSGT00940000159248 ENSGT00940000153617.A.b ENSGT00940000163061.a.b.b.a ENSGT00960000189368 ENSGT01010000222912 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000159560 ENSGT01050000244840.A.b.a Turkey MODERN SPECIES 23 TNFAIP8L1 (ENSMGAG00000006289) MYDGF (ENSMGAG00000006282) ENSMGAG00000006229 ENSMGAG00000020054 DPP9 (ENSMGAG00000006190) FEM1A (ENSMGAG00000006189) ENSMGAG00000015754 UHRF1 (ENSMGAG00000006081) ENSMGAG00000005999 PTPRS (ENSMGAG00000005856) ENSMGAG00000015753 ENSMGAG00000018511 ENSMGAG00000018037 TPM4 (ENSMGAG00000005761) ##22 RAB8A (ENSMGAG00000016553) CIB3 (ENSMGAG00000005738) FAM32A (ENSMGAG00000021418) AP1M1 (ENSMGAG00000005717) ENSMGAG00000005712 EPS15L1 (ENSMGAG00000005657) CALR3 (ENSMGAG00000005629) ENSMGAG00000005624 CHERP (ENSMGAG00000005571) SLC35E1 (ENSMGAG00000005552) MED26 (ENSMGAG00000005545) TMEM38A (ENSMGAG00000005518) SIN3B (ENSMGAG00000005467) F2RL3 (ENSMGAG00000015746) CPAMD8 (ENSMGAG00000005382) Chicken MODERN SPECIES 20 MYDGF (ENSGALG00010028746) TNFAIP8L1 (ENSGALG00010028221) ENSGALG00010028207 DPP9 (ENSGALG00010028199) TICAM1 (ENSGALG00010028535) ENSGALG00010028541 FEM1A (ENSGALG00010028538) UHRF1 (ENSGALG00010028528) KDM4B (ENSGALG00010027292) PTPRS (ENSGALG00010027285) ENSGALG00010027967 ENSGALG00010027963 ENSGALG00010027961 ENSGALG00010028735 ##22 TPM4 (ENSGALG00010027959) ##22 RAB8A (ENSGALG00010027956) CIB3 (ENSGALG00010027952) FAM32A (ENSGALG00010027951) AP1M1 (ENSGALG00010027946) KLF2 (ENSGALG00010027941) ENSGALG00010027936 CALR3 (ENSGALG00010027111) C19orf44 (ENSGALG00010027109) CHERP (ENSGALG00010027105) SLC35E1 (ENSGALG00010028399) MED26 (ENSGALG00010028391) SMIM7 (ENSGALG00010027360) TMEM38A (ENSGALG00010027351) SIN3B (ENSGALG00010027346) F2RL3 (ENSGALG00010027279) Neognathae_b ANCESTRAL SPECIES 22 ENSGT00940000165355 ENSGT00940000159170 ENSGT00390000003488.a.b.a ENSGT00390000000777 ENSGT00940000167025 ENSGT00940000158174 ENSGT00940000161210 ENSGT00940000162411 ENSGT00950000182920.b.a.a.c.b ENSGT00390000008296.a ENSGT00940000159248 ENSGT00940000153617.A.b ENSGT00940000163061.a.b.b.a ENSGT00960000189368 ENSGT01010000222912 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 ENSGT00940000159560 Passeriformes ANCESTRAL SPECIES 34 ENSGT00940000153942.a.f ENSGT00950000182920.b.a.a.d.d.a ENSGT00950000182920.b.a.a.d.d.b ENSGT00940000159170 ENSGT00390000003488.a.b.a ENSGT00390000000777 ENSGT00940000167025 ENSGT00940000158174 ENSGT00940000161210 ENSGT00940000162411 ENSGT00950000182920.b.a.a.c.b ENSGT00390000008296.a ENSGT00940000159248 ENSGT00940000153617.A.b ENSGT01010000222912 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00390000002505 ENSGT00730000111147 Great tit MODERN SPECIES 21 SH3GL1 (ENSPMJG00000012869) CHAF1A (ENSPMJG00000012870) UBXN6 (ENSPMJG00000012871) HDGFL2 (ENSPMJG00000012872) ENSPMJG00000012873 ENSPMJG00000012874 SEMA6B (ENSPMJG00000012875) TNFAIP8L1 (ENSPMJG00000012877) MYDGF (ENSPMJG00000012878) DPP9 (ENSPMJG00000012879) FEM1A (ENSPMJG00000012880) ENSPMJG00000012881 UHRF1 (ENSPMJG00000012887) KDM4B (ENSPMJG00000012891) PTPRS (ENSPMJG00000012892) TPM4 (ENSPMJG00000012907) ##22 RAB8A (ENSPMJG00000012908) CIB3 (ENSPMJG00000012910) ENSPMJG00000012911 AP1M1 (ENSPMJG00000012912) ENSPMJG00000012916 EPS15L1 (ENSPMJG00000012918) ENSPMJG00000012919 CHERP (ENSPMJG00000012920) Passeriformes_d ANCESTRAL SPECIES 35 ENSGT00940000153942.a.f ENSGT00950000182920.b.a.a.d.d.a ENSGT00950000182920.b.a.a.d.d.b ENSGT00940000159170 ENSGT00390000003488.a.b.a ENSGT00390000000777 ENSGT00940000167025 ENSGT00940000158174 ENSGT00940000161210 ENSGT00940000162411 ENSGT00950000182920.b.a.a.c.b ENSGT00390000008296.a ENSGT00940000159248 ENSGT00940000153617.A.b ENSGT01010000222912 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00390000002505 ENSGT00730000111147 Flycatcher MODERN SPECIES 20 CHAF1A (ENSFALG00000001107) UBXN6 (ENSFALG00000001114) HDGFL2 (ENSFALG00000001124) ENSFALG00000027056 ENSFALG00000001138 SEMA6B (ENSFALG00000001158) ENSFALG00000026767 MYDGF (ENSFALG00000027457) DPP9 (ENSFALG00000001176) FEM1A (ENSFALG00000014869) ENSFALG00000028726 UHRF1 (ENSFALG00000001187) KDM4B (ENSFALG00000001194) PTPRS (ENSFALG00000013476) ENSFALG00000024784 TPM4 (ENSFALG00000013464) ##22 RAB8A (ENSFALG00000025642) CIB3 (ENSFALG00000013443) AP1M1 (ENSFALG00000027271) ENSFALG00000013417 EPS15L1 (ENSFALG00000013413) ENSFALG00000013412 CHERP (ENSFALG00000013410) ENSFALG00000026654 Passeriformes_g ANCESTRAL SPECIES 53 ENSGT00940000153942.a.f ENSGT00950000182920.b.a.a.d.d.a ENSGT00950000182920.b.a.a.d.d.b ENSGT00940000159170 ENSGT00390000003488.a.b.a ENSGT00390000000777 ENSGT00940000167025 ENSGT00940000158174 ENSGT00940000161210 ENSGT00940000162411 ENSGT00950000182920.b.a.a.c.b ENSGT00390000008296.a ENSGT00940000159248 ENSGT00940000153617.A.b ENSGT01010000222912 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00390000002505 ENSGT00730000111147 Medium ground finch MODERN SPECIES 249 HDGFL2 (ENSGFOG00000002177) ENSGFOG00000002207 ENSGFOG00000002220 ENSGFOG00000002224 SEMA6B (ENSGFOG00000002242) TNFAIP8L1 (ENSGFOG00000002324) MYDGF (ENSGFOG00000002338) DPP9 (ENSGFOG00000002357) FEM1A (ENSGFOG00000002403) TICAM1 (ENSGFOG00000002420) ENSGFOG00000002445 UHRF1 (ENSGFOG00000002580) ENSGFOG00000002713 KDM4B (ENSGFOG00000002738) PTPRS (ENSGFOG00000003489) TPM4 (ENSGFOG00000013615) ##22 RAB8A (ENSGFOG00000013616) CIB3 (ENSGFOG00000013618) FAM32A (ENSGFOG00000013620) AP1M1 (ENSGFOG00000013625) ENSGFOG00000013628 EPS15L1 (ENSGFOG00000013639) ENSGFOG00000013851 CHERP (ENSGFOG00000013853) Passeroidea ANCESTRAL SPECIES 29 ENSGT00940000153942.a.f ENSGT00950000182920.b.a.a.d.d.a ENSGT00950000182920.b.a.a.d.d.b ENSGT00940000159170 ENSGT00390000003488.a.b.a ENSGT00390000000777 ENSGT00940000167025 ENSGT00940000158174 ENSGT00940000161210 ENSGT00940000162411 ENSGT00950000182920.b.a.a.c.b ENSGT00390000008296.a ENSGT00940000159248 ENSGT00940000153617.A.b ENSGT01010000222912 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00390000002505 ENSGT00730000111147 Zebra finch MODERN SPECIES 21 HDGFL2 (ENSTGUG00000000805) ENSTGUG00000022366 ENSTGUG00000028356 SEMA6B (ENSTGUG00000021650) TNFAIP8L1 (ENSTGUG00000018515) MYDGF (ENSTGUG00000000803) ENSTGUG00000000802 DPP9 (ENSTGUG00000000796) FEM1A (ENSTGUG00000018247) TICAM1 (ENSTGUG00000000795) ENSTGUG00000020598 UHRF1 (ENSTGUG00000000781) KDM4B (ENSTGUG00000000775) PTPRS (ENSTGUG00000000729) ENSTGUG00000023725 TPM4 (ENSTGUG00000000724) ##22 RAB8A (ENSTGUG00000028573) CIB3 (ENSTGUG00000000714) AP1M1 (ENSTGUG00000000701) ENSTGUG00000000700 EPS15L1 (ENSTGUG00000000686) C19orf44 (ENSTGUG00000026821) CHERP (ENSTGUG00000000680) TMEM259 (ENSTGUG00000000673) GRIN3B (ENSTGUG00000000668) WDR18 (ENSTGUG00000000664) ARID3A (ENSTGUG00000021699) R3HDM4 (ENSTGUG00000000663) MED16 (ENSTGUG00000000660) CFD (ENSTGUG00000000656) PLPPR3 (ENSTGUG00000000652) Common canary MODERN SPECIES 85 ENSSCAG00000014886 CYP26B1 (ENSSCAG00000014891) ENSSCAG00000014963 ENSSCAG00000015127 TPM4 (ENSSCAG00000015130) ##22 RAB8A (ENSSCAG00000015132) CIB3 (ENSSCAG00000015136) FAM32A (ENSSCAG00000015139) AP1M1 (ENSSCAG00000015143) ENSSCAG00000015146 EPS15L1 (ENSSCAG00000015209) C19orf44 (ENSSCAG00000015326) CHERP (ENSSCAG00000015331) Neognathae_c ANCESTRAL SPECIES 24 ENSGT00940000165355 ENSGT00940000159170 ENSGT00390000003488.a.b.a ENSGT00390000000777 ENSGT00940000167025 ENSGT00940000158174 ENSGT00940000161210 ENSGT00940000162411 ENSGT00950000182920.b.a.a.c.b ENSGT00390000008296.a ENSGT00940000159248 ENSGT00940000153617.A.b ENSGT00940000163061.a.b.b.a ENSGT00960000189368 ENSGT01010000222912 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 ENSGT00940000159560 Golden eagle MODERN SPECIES 3 ENSACCG00020015190 SEMA6B (ENSACCG00020015172) TNFAIP8L1 (ENSACCG00020015159) MYDGF (ENSACCG00020015145) ENSACCG00020015126 DPP9 (ENSACCG00020015096) FEM1A (ENSACCG00020015061) TICAM1 (ENSACCG00020015056) ENSACCG00020015029 UHRF1 (ENSACCG00020014998) KDM4B (ENSACCG00020014932) PTPRS (ENSACCG00020013793) ENSACCG00020012317 ENSACCG00020012297 ENSACCG00020012282 TPM4 (ENSACCG00020012245) ##22 RAB8A (ENSACCG00020012160) CIB3 (ENSACCG00020012134) FAM32A (ENSACCG00020012083) AP1M1 (ENSACCG00020012076) ENSACCG00020012058 EPS15L1 (ENSACCG00020011983) CALR3 (ENSACCG00020011798) C19orf44 (ENSACCG00020011769) CHERP (ENSACCG00020011736) SLC35E1 (ENSACCG00020011685) MED26 (ENSACCG00020011662) SMIM7 (ENSACCG00020011633) TMEM38A (ENSACCG00020011612) ENSACCG00020011593 SIN3B (ENSACCG00020011471) Kakapo MODERN SPECIES 13 HDGFL2 (ENSSHBG00005019068) ENSSHBG00005019065 ENSSHBG00005019062 SEMA6B (ENSSHBG00005019060) TNFAIP8L1 (ENSSHBG00005019057) MYDGF (ENSSHBG00005019056) ENSSHBG00005019054 DPP9 (ENSSHBG00005018731) FEM1A (ENSSHBG00005018701) TICAM1 (ENSSHBG00005018696) ENSSHBG00005018694 UHRF1 (ENSSHBG00005018663) ENSSHBG00005018627 ENSSHBG00005018600 ENSSHBG00005018598 TPM4 (ENSSHBG00005018593) ##22 RAB8A (ENSSHBG00005018586) CIB3 (ENSSHBG00005018583) FAM32A (ENSSHBG00005018578) AP1M1 (ENSSHBG00005018575) ENSSHBG00005018572 EPS15L1 (ENSSHBG00005018556) CALR3 (ENSSHBG00005018541) C19orf44 (ENSSHBG00005018538) CHERP (ENSSHBG00005018536) SLC35E1 (ENSSHBG00005018530) MED26 (ENSSHBG00005018529) TMEM38A (ENSSHBG00005018528) ENSSHBG00005018526 SMIM7 (ENSSHBG00005018524) SIN3B (ENSSHBG00005018521) Cryptodira ANCESTRAL SPECIES 19 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000165051 ENSGT00940000161635 Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 70 DPP9 (ENSPSIG00000006443) FEM1A (ENSPSIG00000006434) ENSPSIG00000005970 ARRDC5 (ENSPSIG00000005653) UHRF1 (ENSPSIG00000017852) KDM4B (ENSPSIG00000017498) PTPRS (ENSPSIG00000013534) ENSPSIG00000013263 ENSPSIG00000013199 ENSPSIG00000011679 ENSPSIG00000000968 ENSPSIG00000009367 ENSPSIG00000009357 MICOS13 (ENSPSIG00000009258) HSD11B1L (ENSPSIG00000008754) ENSPSIG00000008646 ##22 RAB8A (ENSPSIG00000007911) Chinese turtle MODERN SPECIES 1701 ENSPSIG00000009587 ##22 ENSPSIG00000009659 ENSPSIG00000009752 #23 Testudinoidea ANCESTRAL SPECIES 18 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000165051 ENSGT00940000161635 Emydidae ANCESTRAL SPECIES 14 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000165051 ENSGT00940000161635 painted turtle MODERN SPECIES 771 AP1M1 (ENSCPBG00000015037) TPM4 (ENSCPBG00000015030) ##22 RAB8A (ENSCPBG00000015027) CIB3 (ENSCPBG00000015022) ENSCPBG00000015018 EPS15L1 (ENSCPBG00000015007) CALR3 (ENSCPBG00000014982) C19orf44 (ENSCPBG00000014974) CHERP (ENSCPBG00000014970) SLC35E1 (ENSCPBG00000014966) MED26 (ENSCPBG00000014964) SMIM7 (ENSCPBG00000014961) TMEM38A (ENSCPBG00000014959) NWD1 (ENSCPBG00000014938) SIN3B (ENSCPBG00000014932) F2RL3 (ENSCPBG00000014930) CPAMD8 (ENSCPBG00000014917) Three-toed box turtle MODERN SPECIES 92 TPM4 (ENSTMTG00000004674) ##22 RAB8A (ENSTMTG00000005187) CIB3 (ENSTMTG00000005210) FAM32A (ENSTMTG00000005230) AP1M1 (ENSTMTG00000005242) ENSTMTG00000005277 EPS15L1 (ENSTMTG00000005574) CALR3 (ENSTMTG00000010255) ENSTMTG00000010292 CHERP (ENSTMTG00000010306) SLC35E1 (ENSTMTG00000010322) MED26 (ENSTMTG00000010343) TMEM38A (ENSTMTG00000010365) ENSTMTG00000010464 NWD1 (ENSTMTG00000010502) SIN3B (ENSTMTG00000010646) Testudinidae ANCESTRAL SPECIES 20 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495.b ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 ENSGT00940000159560 Abingdon island giant tortoise MODERN SPECIES 547 TPM4 (ENSCABG00000010882) ##22 RAB8A (ENSCABG00000010875) CIB3 (ENSCABG00000010874) FAM32A (ENSCABG00000010872) AP1M1 (ENSCABG00000010869) ENSCABG00000010867 EPS15L1 (ENSCABG00000008427) CALR3 (ENSCABG00000008393) ENSCABG00000008392 CHERP (ENSCABG00000008387) SLC35E1 (ENSCABG00000008384) MED26 (ENSCABG00000008383) Goode s thornscrub tortoise MODERN SPECIES 14 ENSGEVG00005014104 ##22 TPM4 (ENSGEVG00005014164) ##22 RAB8A (ENSGEVG00005014211) CIB3 (ENSGEVG00005014229) FAM32A (ENSGEVG00005014273) AP1M1 (ENSGEVG00005014343) ENSGEVG00005014693 EPS15L1 (ENSGEVG00005015080) CALR3 (ENSGEVG00005016752) C19orf44 (ENSGEVG00005016875) CHERP (ENSGEVG00005016897) SLC35E1 (ENSGEVG00005016933) MED26 (ENSGEVG00005016975) SMIM7 (ENSGEVG00005016994) TMEM38A (ENSGEVG00005017010) NWD1 (ENSGEVG00005017068) SIN3B (ENSGEVG00005017238) Mammalia ANCESTRAL SPECIES 64 ENSGT00940000162790.a ENSGT01090000260395 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021 ENSGT00940000162906.c.a ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f Platypus MODERN SPECIES 84 ENSOANG00000001542 RASAL3 (ENSOANG00000005135) PGLYRP2 (ENSOANG00000005133) CYP4F22 (ENSOANG00000005131) CYP4F8 (ENSOANG00000050280) ENSOANG00000038160 ENSOANG00000041233 ENSOANG00000045370 ENSOANG00000005128 ENSOANG00000048975 ENSOANG00000009803 ENSOANG00000007761 ENSOANG00000041152 ENSOANG00000005125 ENSOANG00000046107 TPM4 (ENSOANG00000036595) ##22 RAB8A (ENSOANG00000002825) CIB3 (ENSOANG00000012801) FAM32A (ENSOANG00000037684) AP1M1 (ENSOANG00000042206) KLF2 (ENSOANG00000014443) EPS15L1 (ENSOANG00000003714) ENSOANG00000049384 ENSOANG00000007244 CHERP (ENSOANG00000045953) SLC35E1 (ENSOANG00000042325) ENSOANG00000013449 SMIM7 (ENSOANG00000047213) TMEM38A (ENSOANG00000007866) ENSOANG00000007867 NWD1 (ENSOANG00000007868) Theria ANCESTRAL SPECIES 29 ENSGT00940000162906.c.a ENSGT00940000155021.n ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000162790.a ENSGT01090000260395 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.m.b.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000165051 Marsupialia ANCESTRAL SPECIES 1 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n.w.b ENSGT00940000155021.n.w.a.a ENSGT00940000155021.n.w.a.b ENSGT00940000155021.n.x ENSGT00940000162906.c.a ENSGT01100000263561.C.f.a.a ENSGT01100000263561.C.f.a.b ENSGT00940000165043.f ENSGT01100000263561.C.f.b ENSGT00940000165043.e ENSGT00940000162704.b ENSGT01030000234542.b.b.b ##22 ENSGT00940000162704.a.b ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000165051 Opossum MODERN SPECIES 2 ENSMODG00000023817 ENSMODG00000014822 ENSMODG00000014825 ENSMODG00000014807 VN2R506 (ENSMODG00000047174) ENSMODG00000049015 ENSMODG00000040453 ENSMODG00000038210 ENSMODG00000042226 ENSMODG00000050489 ENSMODG00000023809 ENSMODG00000037663 ENSMODG00000051449 ENSMODG00000046477 ENSMODG00000043058 ##22 TPM4 (ENSMODG00000014882) ##22 RAB8A (ENSMODG00000014888) ENSMODG00000014894 ENSMODG00000048848 CIB3 (ENSMODG00000014899) FAM32A (ENSMODG00000014904) AP1M1 (ENSMODG00000014908) ENSMODG00000039199 EPS15L1 (ENSMODG00000014917) CALR3 (ENSMODG00000014922) ENSMODG00000014929 CHERP (ENSMODG00000014938) SLC35E1 (ENSMODG00000014942) MED26 (ENSMODG00000014944) SMIM7 (ENSMODG00000050177) TMEM38A (ENSMODG00000014946) Marsupialia_b ANCESTRAL SPECIES 24 ENSGT00940000162704.a.a.a.b ENSGT00940000162704.a.b ENSGT00940000162704.b ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000165051 Tasmanian devil MODERN SPECIES ENSSHAG00000025965 ENSSHAG00000029751 ENSSHAG00000001513 ENSSHAG00000028431 ENSSHAG00000027343 ENSSHAG00000029568 ENSSHAG00000021001 ENSSHAG00000030472 ENSSHAG00000028837 ENSSHAG00000001531 ENSSHAG00000028195 ENSSHAG00000024860 ENSSHAG00000031787 ENSSHAG00000025835 ENSSHAG00000004640 TPM4 (ENSSHAG00000024325) ##22 RAB8A (ENSSHAG00000006491) CIB3 (ENSSHAG00000007435) FAM32A (ENSSHAG00000029761) AP1M1 (ENSSHAG00000007792) KLF2 (ENSSHAG00000027323) EPS15L1 (ENSSHAG00000009699) CALR3 (ENSSHAG00000010520) ENSSHAG00000010638 CHERP (ENSSHAG00000010752) MED26 (ENSSHAG00000011089) SMIM7 (ENSSHAG00000032265) TMEM38A (ENSSHAG00000020699) ENSSHAG00000023609 NWD1 (ENSSHAG00000001246) SIN3B (ENSSHAG00000004536) Diprotodontia ANCESTRAL SPECIES 68 ENSGT00940000162704.a.a.a.b ENSGT00940000162704.a.b ENSGT00940000162704.b ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000165051 Wallaby MODERN SPECIES 7521 ENSMEUG00000010945 ##22 Diprotodontia_a ANCESTRAL SPECIES 16 ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n.w.b ENSGT00940000155021.n.w.a.a ENSGT00940000162906.c.a ENSGT01100000263561.C.f.a.a ENSGT01100000263561.C.f.a.b ENSGT00940000165043.f ENSGT01100000263561.C.f.b ENSGT00940000165043.e.b ENSGT00940000162704.a.a.a.b ENSGT00940000162704.a.b ENSGT00940000162704.b ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000165051 koala MODERN SPECIES 190 ENSPCIG00000004722 ENSPCIG00000004728 CYP4F22 (ENSPCIG00000004755) ENSPCIG00000024857 ENSPCIG00000005143 ENSPCIG00000032799 ENSPCIG00000004785 ENSPCIG00000004796 ENSPCIG00000034279 ENSPCIG00000035109 ENSPCIG00000031392 ENSPCIG00000019660 ENSPCIG00000001284 ENSPCIG00000019656 ENSPCIG00000019653 TPM4 (ENSPCIG00000019652) ##22 RAB8A (ENSPCIG00000019651) ENSPCIG00000035199 CIB3 (ENSPCIG00000009310) FAM32A (ENSPCIG00000019649) AP1M1 (ENSPCIG00000019644) EPS15L1 (ENSPCIG00000019632) ENSPCIG00000034808 CALR3 (ENSPCIG00000019623) ENSPCIG00000019616 CHERP (ENSPCIG00000019615) SLC35E1 (ENSPCIG00000019614) MED26 (ENSPCIG00000019612) SMIM7 (ENSPCIG00000019611) TMEM38A (ENSPCIG00000019610) ENSPCIG00000032012 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1141 ENSVURG00010010915 ENSVURG00010010896 TPM4 (ENSVURG00010010858) ##22 RAB8A (ENSVURG00010010843) ENSVURG00010010832 CIB3 (ENSVURG00010010825) FAM32A (ENSVURG00010010812) AP1M1 (ENSVURG00010010801) KLF2 (ENSVURG00010010792) EPS15L1 (ENSVURG00010010717) CALR3 (ENSVURG00010010676) ENSVURG00010010663 CHERP (ENSVURG00010010636) SLC35E1 (ENSVURG00010010617) MED26 (ENSVURG00010010603) SMIM7 (ENSVURG00010010588) TMEM38A (ENSVURG00010010577) ENSVURG00010010568 Common wonbat MODERN SPECIES 273 ENSVURG00010019618 ENSVURG00010019611 ##22 IL1RAPL1 (ENSVURG00010019602) ENSVURG00010019594 ENSVURG00010019587 TASL (ENSVURG00010019581) ENSVURG00010019552 Eutheria ANCESTRAL SPECIES 24 ENSGT00940000154227.b ENSGT01100000263561.C.c ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000162790.a ENSGT01090000260395 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.m.b.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Boreoeutheria ANCESTRAL SPECIES 18 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000163407 ENSGT00940000164421 ENSGT00940000154646.C ENSGT01100000263561.C.d.b.b ENSGT01060000248581.A.b ENSGT01100000263561.C.d.a ENSGT00940000165043 ENSGT01100000263561.C.d.b.a ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000177900 Euarchontoglires ANCESTRAL SPECIES 18 ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT01100000263561.C.d.b.b ENSGT00940000164421 ENSGT01100000263561.C.d.b.a ENSGT01100000263561.C.d.a ENSGT01060000248581.A.b ENSGT00940000163407 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Euarchontoglires_A ANCESTRAL SPECIES 20 ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT01100000263561.C.d.b.b ENSGT01100000263561.C.d.b.a ENSGT01100000263561.C.d.a ENSGT01060000248581.A.b ENSGT00940000163407 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Tree shrew MODERN SPECIES 3500 TPM4 (ENSTBEG00000012927) ##22 RAB8A (ENSTBEG00000012955) Glires ANCESTRAL SPECIES 21 ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT01100000263561.C.d.b.b ENSGT01100000263561.C.d.b.a ENSGT01100000263561.C.d.a ENSGT01060000248581.A.b ENSGT00940000163407 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Lagomorpha ANCESTRAL SPECIES 168 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00390000010974 ENSGT00980000200725 ENSGT00940000159560 Rabbit MODERN SPECIES 509 ENSOCUG00000034900 ENSOCUG00000024394 ENSOCUG00000032087 ENSOCUG00000035982 ENSOCUG00000033386 ENSOCUG00000004670 ENSOCUG00000030836 ZNF709 (ENSOCUG00000002915) ENSOCUG00000024024 ENSOCUG00000014100 ENSOCUG00000035179 ENSOCUG00000036514 ENSOCUG00000034955 ENSOCUG00000009888 ENSOCUG00000025986 TPM4 (ENSOCUG00000009884) ##22 ENSOCUG00000031863 HSH2D (ENSOCUG00000002233) CIB3 (ENSOCUG00000025206) FAM32A (ENSOCUG00000002238) ENSOCUG00000025980 ENSOCUG00000029892 EPS15L1 (ENSOCUG00000010744) CALR3 (ENSOCUG00000013554) ENSOCUG00000023973 CHERP (ENSOCUG00000030358) ENSOCUG00000027878 SMIM7 (ENSOCUG00000036659) TMEM38A (ENSOCUG00000012404) ENSOCUG00000029419 ENSOCUG00000025997 Pika MODERN SPECIES 3871 TPM4 (ENSOPRG00000001721) ##22 ENSOPRG00000001747 RAB8A (ENSOPRG00000001754) HSH2D (ENSOPRG00000001777) CIB3 (ENSOPRG00000001796) Rodentia ANCESTRAL SPECIES 17 ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT01100000263561.C.d.b.b ENSGT01100000263561.C.d.b.a ENSGT01100000263561.C.d.a ENSGT01060000248581.A.b ENSGT00940000163407 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Rodentia_A ANCESTRAL SPECIES 16 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT01100000263561.C.d.b.b ENSGT01100000263561.C.d.a ENSGT01060000248581.A.b ENSGT00940000163407 ENSGT01090000260018.B.a.a ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Sciuridae ANCESTRAL SPECIES 20 ENSGT00940000160234 ENSGT00800000125293 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT01100000263561.C.d.b.b ENSGT01100000263561.C.d.a.i ENSGT01090000260018.B.a.a ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Eurasian red squirrel MODERN SPECIES 7 ENSSVLG00005016914 ENSSVLG00005016928 ENSSVLG00005016941 ZNF20 (ENSSVLG00005016965) ENSSVLG00005017258 ENSSVLG00005017510 ENSSVLG00005017598 ENSSVLG00005017660 ENSSVLG00005017842 ENSSVLG00005019601 ENSSVLG00005019657 ENSSVLG00005020101 ENSSVLG00005021613 ENSSVLG00005021651 ENSSVLG00005021686 TPM4 (ENSSVLG00005021714) ##22 RAB8A (ENSSVLG00005021798) ENSSVLG00005021840 HSH2D (ENSSVLG00005021858) CIB3 (ENSSVLG00005021909) FAM32A (ENSSVLG00005021993) AP1M1 (ENSSVLG00005022090) KLF2 (ENSSVLG00005022188) EPS15L1 (ENSSVLG00005022241) CALR3 (ENSSVLG00005022305) C19orf44 (ENSSVLG00005022379) CHERP (ENSSVLG00005022500) SLC35E1 (ENSSVLG00005022541) MED26 (ENSSVLG00005022596) SMIM7 (ENSSVLG00005022628) TMEM38A (ENSSVLG00005022680) Marmotini ANCESTRAL SPECIES 12 ENSGT00940000158035 ENSGT01100000263561.C.c ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000163407 ENSGT01100000263561.C.d.a.j ENSGT00940000162704 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Alpin marmot MODERN SPECIES 24 EPHX3 (ENSMMMG00000022401) ENSMMMG00000022407 ENSMMMG00000022411 AKAP8 (ENSMMMG00000022416) AKAP8L (ENSMMMG00000022438) ENSMMMG00000022459 RASAL3 (ENSMMMG00000022474) PGLYRP2 (ENSMMMG00000022496) CYP4F22 (ENSMMMG00000022504) CYP4F8 (ENSMMMG00000022511) CYP4F2 (ENSMMMG00000022533) ENSMMMG00000022557 ENSMMMG00000022564 ENSMMMG00000022610 ENSMMMG00000022612 TPM4 (ENSMMMG00000022621) ##22 RAB8A (ENSMMMG00000023118) ENSMMMG00000023121 CIB3 (ENSMMMG00000023123) FAM32A (ENSMMMG00000023124) AP1M1 (ENSMMMG00000023132) EPS15L1 (ENSMMMG00000023140) CALR3 (ENSMMMG00000023173) C19orf44 (ENSMMMG00000023181) CHERP (ENSMMMG00000023187) SLC35E1 (ENSMMMG00000023196) MED26 (ENSMMMG00000023201) SMIM7 (ENSMMMG00000023203) TMEM38A (ENSMMMG00000023209) NWD1 (ENSMMMG00000023213) SIN3B (ENSMMMG00000023221) Marmotini_b ANCESTRAL SPECIES 12 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000163407 ENSGT01100000263561.C.d.a.j ENSGT01100000263561.C.d.a.i ENSGT00950000182755.b.a.a.b.a.b.a.a.b ENSGT00950000182755.b.a.a.b.a.b.a.b.b.a.b.c ENSGT00940000162704 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Squirrel MODERN SPECIES 196 NOTCH3 (ENSSTOG00000003378) EPHX3 (ENSSTOG00000003433) BRD4 (ENSSTOG00000003443) AKAP8 (ENSSTOG00000006762) AKAP8L (ENSSTOG00000022788) ENSSTOG00000006775 ENSSTOG00000024022 PGLYRP2 (ENSSTOG00000021401) CYP4F22 (ENSSTOG00000016025) CYP4F8 (ENSSTOG00000016028) ENSSTOG00000033817 ENSSTOG00000016037 ENSSTOG00000029948 ENSSTOG00000033644 ENSSTOG00000026892 TPM4 (ENSSTOG00000024252) ##22 RAB8A (ENSSTOG00000025380) ENSSTOG00000033716 FAM32A (ENSSTOG00000016286) AP1M1 (ENSSTOG00000016287) ENSSTOG00000021161 EPS15L1 (ENSSTOG00000020658) CALR3 (ENSSTOG00000012079) C19orf44 (ENSSTOG00000022446) CHERP (ENSSTOG00000012089) SLC35E1 (ENSSTOG00000012106) MED26 (ENSSTOG00000019645) SMIM7 (ENSSTOG00000027648) TMEM38A (ENSSTOG00000020542) NWD1 (ENSSTOG00000014626) SIN3B (ENSSTOG00000014634) Arctic ground squirrel MODERN SPECIES 73 BRD4 (ENSUPAG00010000930) AKAP8 (ENSUPAG00010000900) AKAP8L (ENSUPAG00010000867) WIZ (ENSUPAG00010000750) RASAL3 (ENSUPAG00010000678) PGLYRP2 (ENSUPAG00010000648) CYP4F22 (ENSUPAG00010000617) CYP4F3 (ENSUPAG00010000077) ENSUPAG00010000051 ENSUPAG00010000031 ENSUPAG00010021764 ENSUPAG00010021748 ENSUPAG00010021745 ENSUPAG00010021742 ENSUPAG00010021740 ##22 TPM4 (ENSUPAG00010021735) ##22 RAB8A (ENSUPAG00010021732) ENSUPAG00010021730 ENSUPAG00010021728 CIB3 (ENSUPAG00010021724) FAM32A (ENSUPAG00010021722) AP1M1 (ENSUPAG00010021716) KLF2 (ENSUPAG00010021714) EPS15L1 (ENSUPAG00010021679) CALR3 (ENSUPAG00010021675) C19orf44 (ENSUPAG00010021668) CHERP (ENSUPAG00010021662) SLC35E1 (ENSUPAG00010021658) MED26 (ENSUPAG00010021653) ENSUPAG00010021646 TMEM38A (ENSUPAG00010021641) Hystricomorpha ANCESTRAL SPECIES 47 ENSGT00940000160620 ENSGT00390000010450 ENSGT00940000157050 ENSGT00940000157166 ENSGT00390000012431 ENSGT00940000159994 ENSGT00950000182904.a.b.b ENSGT00390000012482 ENSGT00940000159489 ENSGT00390000015797.d ENSGT00390000015797.c.b ENSGT00940000161827 ENSGT00940000163613 ENSGT00940000159134 ENSGT00940000160489 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000008708 ENSHGLG00000008051 ENSHGLG00000042871 ENSHGLG00000039806 ENSHGLG00000005875 ENSHGLG00000019153 SH2D1A (ENSHGLG00000003536) ENSHGLG00000019940 STAG2 (ENSHGLG00000002804) ENSHGLG00000002710 ENSHGLG00000050498 ENSHGLG00000033968 ENSHGLG00000038827 ENSHGLG00000049745 ENSHGLG00000004222 ENSHGLG00000020259 ##22 ENSHGLG00000003480 ENSHGLG00000048745 ENSHGLG00000003217 ENSHGLG00000002840 ENSHGLG00000020492 ENSHGLG00000035517 ENSHGLG00000039468 ENSHGLG00000035272 ENSHGLG00000049618 ENSHGLG00000000099 ENSHGLG00000032972 ENSHGLG00000000073 ENSHGLG00000035625 ENSHGLG00000000956 ENSHGLG00000000828 Naked mole-rat female MODERN SPECIES ENSHGLG00000019985 ENSHGLG00000046356 ENSHGLG00000009234 ENSHGLG00000043662 ENSHGLG00000041448 ENSHGLG00000040729 ENSHGLG00000046780 ENSHGLG00000036605 ENSHGLG00000045900 ENSHGLG00000048949 ENSHGLG00000020965 ENSHGLG00000039295 ENSHGLG00000043095 ENSHGLG00000050360 ENSHGLG00000045720 ENSHGLG00000037899 ##22 ENSHGLG00000048591 ENSHGLG00000043878 ENSHGLG00000037541 ENSHGLG00000038063 ENSHGLG00000034764 ENSHGLG00000000368 ENSHGLG00000038681 ENSHGLG00000044515 ENSHGLG00000047671 ENSHGLG00000041199 ENSHGLG00000004665 ENSHGLG00000033782 ENSHGLG00000020584 ENSHGLG00000038704 ENSHGLG00000019757 Hystricomorpha_a ANCESTRAL SPECIES 55 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649 ENSGT00940000160926 ENSGT00390000012913.a ENSGT00410000025695.a ENSGT00390000012198 ENSGT00390000004097.a ENSGT00940000160464 ENSGT00390000000719 ENSGT00390000007227.b ENSGT00390000008152.B.a ENSGT01050000244941.B.c ENSGT00950000183110.a ENSGT00550000075064 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Guinea pig MODERN SPECIES 86 ENSCPOG00000020266 TPM4 (ENSCPOG00000013643) ##22 RAB8A (ENSCPOG00000036546) ENSCPOG00000035131 CIB3 (ENSCPOG00000009417) ENSCPOG00000033586 ENSCPOG00000009184 ENSCPOG00000026858 ENSCPOG00000032503 ENSCPOG00000031002 ENSCPOG00000026403 MAP1S (ENSCPOG00000021897) UNC13A (ENSCPOG00000026908) COLGALT1 (ENSCPOG00000011059) NIBAN3 (ENSCPOG00000013004) PGLS (ENSCPOG00000039654) SLC27A1 (ENSCPOG00000009747) Hystricomorpha_b ANCESTRAL SPECIES 66 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649 ENSGT00940000160926 ENSGT00390000012913.a ENSGT00410000025695.a ENSGT00390000012198 ENSGT00390000004097.a ENSGT00940000160464 ENSGT00390000000719 ENSGT00390000007227.b ENSGT00390000008152.B.a ENSGT01050000244941.B.c ENSGT00950000183110.a ENSGT00550000075064 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 ENSGT00940000159560 Long-tailed chinchilla MODERN SPECIES 231 SUGP1 (ENSCLAG00000003512) MAU2 (ENSCLAG00000006535) GATAD2A (ENSCLAG00000010160) TSSK6 (ENSCLAG00000018107) NDUFA13 (ENSCLAG00000016915) YJEFN3 (ENSCLAG00000016158) CILP2 (ENSCLAG00000015928) LPAR2 (ENSCLAG00000016969) GMIP (ENSCLAG00000008010) ATP13A1 (ENSCLAG00000009549) ENSCLAG00000007428 ENSCLAG00000007229 DDX11 (ENSCLAG00000007090) ENSCLAG00000006498 ENSCLAG00000006263 TPM4 (ENSCLAG00000006213) ##22 RAB8A (ENSCLAG00000006073) HSH2D (ENSCLAG00000005020) CIB3 (ENSCLAG00000004966) FAM32A (ENSCLAG00000004833) ENSCLAG00000004795 EPS15L1 (ENSCLAG00000003824) CALR3 (ENSCLAG00000003434) ENSCLAG00000005950 CHERP (ENSCLAG00000005484) SLC35E1 (ENSCLAG00000005367) MED26 (ENSCLAG00000005164) TMEM38A (ENSCLAG00000004970) NWD1 (ENSCLAG00000007464) SIN3B (ENSCLAG00000006937) F2RL3 (ENSCLAG00000006791) Degu MODERN SPECIES 345 ENSODEG00000001325 TPM4 (ENSODEG00000001342) ##22 RAB8A (ENSODEG00000001241) ENSODEG00000001251 CIB3 (ENSODEG00000001268) ENSODEG00000001275 AP1M1 (ENSODEG00000001296) EPS15L1 (ENSODEG00000001383) ENSODEG00000001503 CHERP (ENSODEG00000001528) SLC35E1 (ENSODEG00000001560) MED26 (ENSODEG00000001579) SMIM7 (ENSODEG00000001606) TMEM38A (ENSODEG00000001632) NWD1 (ENSODEG00000001676) SIN3B (ENSODEG00000001769) F2RL3 (ENSODEG00000001898) Rodentia_B ANCESTRAL SPECIES 37 ENSGT00940000163407 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Kangaroo rat MODERN SPECIES 427 ENSDORG00000010999 ENSDORG00000011003 Borcs8 (ENSDORG00000027906) Rfxank (ENSDORG00000001449) Nr2c2ap (ENSDORG00000001440) Hapln4 (ENSDORG00000004912) Tm6sf2 (ENSDORG00000004913) ENSDORG00000024315 Mau2 (ENSDORG00000004918) Gatad2a (ENSDORG00000008536) Tssk6 (ENSDORG00000008538) Lpar2 (ENSDORG00000023437) Gmip (ENSDORG00000005179) Atp13a1 (ENSDORG00000005185) ENSDORG00000012240 ENSDORG00000027508 ##22 Rab8a (ENSDORG00000028823) Cib3 (ENSDORG00000002313) Fam32a (ENSDORG00000027872) Eps15l1 (ENSDORG00000012303) Calr3 (ENSDORG00000013084) Cherp (ENSDORG00000027623) Med26 (ENSDORG00000012119) Slc35e1 (ENSDORG00000012110) Smim7 (ENSDORG00000012127) Tmem38a (ENSDORG00000012833) Sin3b (ENSDORG00000010014) Myo9b (ENSDORG00000014352) Use1 (ENSDORG00000027734) ENSDORG00000009450 ENSDORG00000026497 Myomorpha ANCESTRAL SPECIES 43 ENSGT00940000163407 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Lesser Egyptian jerboa MODERN SPECIES 127 ENSJJAG00000015719 Cyp4f18 (ENSJJAG00000019533) Tpm4 (ENSJJAG00000019418) ##22 Rab8a (ENSJJAG00000021959) ENSJJAG00000018938 Fam32a (ENSJJAG00000022461) Ap1m1 (ENSJJAG00000003963) Klf2 (ENSJJAG00000019814) Eps15l1 (ENSJJAG00000001243) ENSJJAG00000008721 ENSJJAG00000012853 Calr3 (ENSJJAG00000019732) Cherp (ENSJJAG00000017982) Slc35e1 (ENSJJAG00000014718) Med26 (ENSJJAG00000020010) Smim7 (ENSJJAG00000000221) Tmem38a (ENSJJAG00000013265) Nwd1 (ENSJJAG00000017294) Muroidea ANCESTRAL SPECIES 47 ENSGT00940000163407 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Upper Galilee mountains blind mole rat MODERN SPECIES 1870 ENSNGAG00000020277 Tpm4 (ENSNGAG00000010813) ##22 Rab8a (ENSNGAG00000007021) ENSNGAG00000022972 Cib3 (ENSNGAG00000004267) Fam32a (ENSNGAG00000021828) Ap1m1 (ENSNGAG00000022674) Klf2 (ENSNGAG00000022236) Eps15l1 (ENSNGAG00000003492) Calr3 (ENSNGAG00000022659) 1700030K09Rik (ENSNGAG00000022589) Cherp (ENSNGAG00000023323) Slc35e1 (ENSNGAG00000021910) Med26 (ENSNGAG00000013875) Smim7 (ENSNGAG00000019358) Tmem38a (ENSNGAG00000016799) Nwd1 (ENSNGAG00000016596) Muroidea_A ANCESTRAL SPECIES 28 ENSGT00950000182755.b.a.a.b.a.b.a.b.b.a.a.c ENSGT00950000182755.b.a.a.b.a.b.a.a.a ENSGT00950000182755.b.a.a.b.a.b.b.a.a ENSGT00940000163407 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Murinae ANCESTRAL SPECIES 42 ENSGT00950000182755.b.a.a.b.a.b.a.b.b.a.a.c ENSGT00950000182755.b.a.a.b.a.b.a.a.a ENSGT00950000182755.b.a.a.b.a.b.a.b.b.a.b ENSGT00950000182755.b.a.a.b.a.b.b.a.a ENSGT00940000163407 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Mus ANCESTRAL SPECIES 6 ENSGT00550000075110 ENSGT00940000154149.b.b ENSGT01030000234558.D.b ENSGT00940000161905 ENSGT00940000161827 ENSGT00940000163613 ENSGT00940000159134 ENSGT00940000160489 ENSGT00950000182755.b.a.a.b.a.b.a.b.b.a.a.c ENSGT00950000182755.b.a.a.b.a.b.a.a.a ENSGT00950000182755.b.a.a.b.a.b.a.b.b.a.b ENSGT00950000182755.b.a.a.b.a.b.b.a.a ENSGT00940000163407 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Mus_A ANCESTRAL SPECIES 8 ENSGT00550000075110 ENSGT00940000154149.b.b ENSGT01030000234558.D.b ENSGT00940000161905 ENSGT00940000161827 ENSGT00940000163613 ENSGT00940000159134 ENSGT00940000160489 ENSGT00950000182755.b.a.a.b.a.b.a.b.b.a.a.c ENSGT00950000182755.b.a.a.b.a.b.a.a.a ENSGT00950000182755.b.a.a.b.a.b.a.b.b.a.b ENSGT00950000182755.b.a.a.b.a.b.b.a.a ENSGT00940000163407 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Mus_B ANCESTRAL SPECIES 6 ENSGT00550000075110 ENSGT00940000154149.b.b ENSGT01030000234558.D.b ENSGT00940000161905 ENSGT00940000161827 ENSGT00940000163613 ENSGT00940000159134 ENSGT00940000160489 ENSGT00950000182755.b.a.a.b.a.b.a.b.b.a.a.c ENSGT00950000182755.b.a.a.b.a.b.a.a.a ENSGT00950000182755.b.a.a.b.a.b.a.b.b.a.b ENSGT00950000182755.b.a.a.b.a.b.b.a.a ENSGT00940000163407 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Mouse MODERN SPECIES 17 Niban3 (ENSMUSG00000043243) Colgalt1 (ENSMUSG00000034807) Unc13a (ENSMUSG00000034799) Jak3 (ENSMUSG00000031805) Insl3 (ENSMUSG00000079019) B3gnt3 (ENSMUSG00000031803) Fcho1 (ENSMUSG00000070000) Zfp709 (ENSMUSG00000056019) Zfp882 (ENSMUSG00000089857) Zfp617 (ENSMUSG00000066880) Zfp961 (ENSMUSG00000052446) Cyp4f18 (ENSMUSG00000003484) Or2z8 (ENSMUSG00000069998) Or2z9 (ENSMUSG00000061561) Or1ab2 (ENSMUSG00000046881) Tpm4 (ENSMUSG00000031799) ##22 Rab8a (ENSMUSG00000003037) Hsh2d (ENSMUSG00000062007) Cib3 (ENSMUSG00000074240) Fam32a (ENSMUSG00000003039) Ap1m1 (ENSMUSG00000003033) Hmgn2-ps (ENSMUSG00000070713) Klf2 (ENSMUSG00000055148) Eps15l1 (ENSMUSG00000006276) Calr3 (ENSMUSG00000019732) 1700030K09Rik (ENSMUSG00000052794) Cherp (ENSMUSG00000052488) Slc35e1 (ENSMUSG00000019731) Med26 (ENSMUSG00000045248) Smim7 (ENSMUSG00000044600) Tmem38a (ENSMUSG00000031791) Mus_C ANCESTRAL SPECIES 5 ENSGT00940000159323 ENSGT00550000075110 ENSGT00940000154149.b.b ENSGT01030000234558.D.b ENSGT00940000161905 ENSGT00940000161827 ENSGT00940000163613 ENSGT00940000159134 ENSGT00940000160489 ENSGT00950000182755.b.a.a.b.a.b.a.a.a ENSGT00950000182755.b.a.a.b.a.b.a.b.b.a.b ENSGT00950000182755.b.a.a.b.a.b.b.a.a ENSGT00940000163407 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 268 Zfp882 (ENSMSIG00000023659) Zfp617 (ENSMSIG00000023674) Zfp961 (ENSMSIG00000023684) Cyp4f18 (ENSMSIG00000023724) ENSMSIG00000023746 Or1ab2 (ENSMSIG00000023754) ENSMSIG00000023766 ENSMSIG00000023771 ##22 ENSMSIG00000023780 Hsh2d (ENSMSIG00000023799) Cib3 (ENSMSIG00000023811) ENSMSIG00000023827 Ap1m1 (ENSMSIG00000023833) Klf2 (ENSMSIG00000023853) Eps15l1 (ENSMSIG00000023866) Calr3 (ENSMSIG00000023992) 1700030K09Rik (ENSMSIG00000024035) Cherp (ENSMSIG00000024071) Slc35e1 (ENSMSIG00000024126) Med26 (ENSMSIG00000024132) ENSMSIG00000024145 Smim7 (ENSMSIG00000024159) Tmem38a (ENSMSIG00000024172) Steppe mouse MODERN SPECIES 1887 Zfp943 (ENSMSIG00000007038) ENSMSIG00000007022 ##22 Zfp942 (ENSMSIG00000007004) ENSMSIG00000006997 spretus MODERN SPECIES 17 MGP_SPRETEiJ_G0032315 Colgalt1 (MGP_SPRETEiJ_G0032316) Unc13a (MGP_SPRETEiJ_G0032317) Jak3 (MGP_SPRETEiJ_G0032318) Insl3 (MGP_SPRETEiJ_G0032319) B3gnt3 (MGP_SPRETEiJ_G0032320) Fcho1 (MGP_SPRETEiJ_G0032321) MGP_SPRETEiJ_G0032322 Zfp882 (MGP_SPRETEiJ_G0032323) Zfp617 (MGP_SPRETEiJ_G0032324) MGP_SPRETEiJ_G0032325 Zfp961 (MGP_SPRETEiJ_G0032326) Cyp4f18 (MGP_SPRETEiJ_G0032327) MGP_SPRETEiJ_G0032328 Or1ab2 (MGP_SPRETEiJ_G0032329) Tpm4 (MGP_SPRETEiJ_G0032330) ##22 Rab8a (MGP_SPRETEiJ_G0032331) Hsh2d (MGP_SPRETEiJ_G0032332) Cib3 (MGP_SPRETEiJ_G0032333) Fam32a (MGP_SPRETEiJ_G0032334) Ap1m1 (MGP_SPRETEiJ_G0032335) Klf2 (MGP_SPRETEiJ_G0032336) Eps15l1 (MGP_SPRETEiJ_G0032337) 2310002L09Rik (MGP_SPRETEiJ_G0032338) Calr3 (MGP_SPRETEiJ_G0032339) 1700030K09Rik (MGP_SPRETEiJ_G0032340) Cherp (MGP_SPRETEiJ_G0032341) Slc35e1 (MGP_SPRETEiJ_G0032342) Med26 (MGP_SPRETEiJ_G0032343) Smim7 (MGP_SPRETEiJ_G0032344) Tmem38a (MGP_SPRETEiJ_G0032345) Ryukyu mouse MODERN SPECIES 17 Pgls (MGP_CAROLIEiJ_G0031195) Niban3 (MGP_CAROLIEiJ_G0031196) Colgalt1 (MGP_CAROLIEiJ_G0031197) Unc13a (MGP_CAROLIEiJ_G0031198) Jak3 (MGP_CAROLIEiJ_G0031199) Insl3 (MGP_CAROLIEiJ_G0031200) B3gnt3 (MGP_CAROLIEiJ_G0031201) Fcho1 (MGP_CAROLIEiJ_G0031202) Zfp882 (MGP_CAROLIEiJ_G0031203) MGP_CAROLIEiJ_G0031204 Zfp961 (MGP_CAROLIEiJ_G0031205) Cyp4f18 (MGP_CAROLIEiJ_G0031206) MGP_CAROLIEiJ_G0031207 MGP_CAROLIEiJ_G0031208 Or1ab2 (MGP_CAROLIEiJ_G0031209) Tpm4 (MGP_CAROLIEiJ_G0031210) ##22 Rab8a (MGP_CAROLIEiJ_G0031211) Hsh2d (MGP_CAROLIEiJ_G0031212) Cib3 (MGP_CAROLIEiJ_G0031213) Fam32a (MGP_CAROLIEiJ_G0031214) Ap1m1 (MGP_CAROLIEiJ_G0031215) Klf2 (MGP_CAROLIEiJ_G0031216) Eps15l1 (MGP_CAROLIEiJ_G0031217) Calr3 (MGP_CAROLIEiJ_G0031218) 1700030K09Rik (MGP_CAROLIEiJ_G0031219) Cherp (MGP_CAROLIEiJ_G0031220) Slc35e1 (MGP_CAROLIEiJ_G0031221) Med26 (MGP_CAROLIEiJ_G0031222) Smim7 (MGP_CAROLIEiJ_G0031223) Tmem38a (MGP_CAROLIEiJ_G0031224) Nwd1 (MGP_CAROLIEiJ_G0031225) Shrew mouse MODERN SPECIES 10 Pgls (MGP_PahariEiJ_G0021660) Niban3 (MGP_PahariEiJ_G0021661) Colgalt1 (MGP_PahariEiJ_G0021662) Unc13a (MGP_PahariEiJ_G0021663) Jak3 (MGP_PahariEiJ_G0021664) Insl3 (MGP_PahariEiJ_G0021665) B3gnt3 (MGP_PahariEiJ_G0021666) Fcho1 (MGP_PahariEiJ_G0021667) Zfp882 (MGP_PahariEiJ_G0021668) Zfp617 (MGP_PahariEiJ_G0021669) Zfp961 (MGP_PahariEiJ_G0021670) Cyp4f18 (MGP_PahariEiJ_G0021671) MGP_PahariEiJ_G0021672 MGP_PahariEiJ_G0021673 Or1ab2 (MGP_PahariEiJ_G0021674) Tpm4 (MGP_PahariEiJ_G0021675) ##22 Rab8a (MGP_PahariEiJ_G0021676) Hsh2d (MGP_PahariEiJ_G0021677) Cib3 (MGP_PahariEiJ_G0021678) Fam32a (MGP_PahariEiJ_G0021679) Ap1m1 (MGP_PahariEiJ_G0021680) Klf2 (MGP_PahariEiJ_G0021681) Eps15l1 (MGP_PahariEiJ_G0021682) Calr3 (MGP_PahariEiJ_G0021683) 1700030K09Rik (MGP_PahariEiJ_G0021684) Cherp (MGP_PahariEiJ_G0021685) Slc35e1 (MGP_PahariEiJ_G0021686) Med26 (MGP_PahariEiJ_G0021687) Smim7 (MGP_PahariEiJ_G0021688) Tmem38a (MGP_PahariEiJ_G0021689) Nwd1 (MGP_PahariEiJ_G0021690) Rat MODERN SPECIES 7 Abhd8 (ENSRNOG00000000054) Ankle1 (ENSRNOG00000017156) Babam1 (ENSRNOG00000017071) Ushbp1 (ENSRNOG00000023485) Nr2f6 (ENSRNOG00000016892) Ocel1 (ENSRNOG00000032575) Use1 (ENSRNOG00000016619) Myo9b (ENSRNOG00000016256) Haus8 (ENSRNOG00000052038) Zfp709 (ENSRNOG00000016186) ENSRNOG00000068058 LOC102548917 (ENSRNOG00000060701) Zfp617 (ENSRNOG00000049856) Cyp4f18 (ENSRNOG00000015751) ENSRNOG00000064919 Tpm4 (ENSRNOG00000015496) ##22 Rab8a (ENSRNOG00000014621) Hsh2d (ENSRNOG00000023614) Cib3 (ENSRNOG00000014600) Fam32a (ENSRNOG00000066630) Ap1m1 (ENSRNOG00000014454) Klf2 (ENSRNOG00000067705) Eps15l1 (ENSRNOG00000013502) Calr3 (ENSRNOG00000013260) C16h19orf44 (ENSRNOG00000023700) Cherp (ENSRNOG00000012323) Slc35e1 (ENSRNOG00000012287) Med26 (ENSRNOG00000012270) Smim7 (ENSRNOG00000042037) Tmem38a (ENSRNOG00000011912) Nwd1 (ENSRNOG00000052129) Cricetidae ANCESTRAL SPECIES 30 ENSGT00950000182755.b.a.a.b.a.b.a.b.b.a.a.c ENSGT00950000182755.b.a.a.b.a.b.a.a.a ENSGT00950000182755.b.a.a.b.a.b.b.a.a ENSGT00940000163407.k ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Cricetinae ANCESTRAL SPECIES 36 ENSGT00950000182755.b.a.a.b.a.b.a.b.b.a.a.c ENSGT00950000182755.b.a.a.b.a.b.a.a.a ENSGT00950000182755.b.a.a.b.a.b.b.a.a ENSGT00940000163407.k ENSGT01090000260018.B.a.a ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Chinese hamster chok1gshd MODERN SPECIES 184 Lpl (ENSCGRG00001017386) Slc18a1 (ENSCGRG00001019831) Atp6v1b2 (ENSCGRG00001020889) Lzts1 (ENSCGRG00001000408) ENSCGRG00001001789 ENSCGRG00001004829 ENSCGRG00001012076 ENSCGRG00001012409 ENSCGRG00001000605 ENSCGRG00001002386 Zfp709 (ENSCGRG00001006005) ENSCGRG00001008064 Zfp961 (ENSCGRG00001010519) Cyp4f18 (ENSCGRG00001014686) ENSCGRG00001016529 Tpm4 (ENSCGRG00001016176) ##22 Rab8a (ENSCGRG00001017409) Hsh2d (ENSCGRG00001018531) Cib3 (ENSCGRG00001004716) Fam32a (ENSCGRG00001006672) Ap1m1 (ENSCGRG00001008071) Klf2 (ENSCGRG00001008944) Eps15l1 (ENSCGRG00001014125) Calr3 (ENSCGRG00001021544) 1700030K09Rik (ENSCGRG00001022027) Cherp (ENSCGRG00001023316) ENSCGRG00001003760 Med26 (ENSCGRG00001005532) Smim7 (ENSCGRG00001010544) Tmem38a (ENSCGRG00001011988) Nwd1 (ENSCGRG00001013606) Cricetidae_B ANCESTRAL SPECIES 17 ENSGT00390000012054.b.ob ENSGT00940000156591 ENSGT00940000157357 ENSGT01050000244968.c ENSGT00390000010950 ENSGT00940000157178 ENSGT00940000159352 ENSGT00940000155068.b ENSGT00940000154078.a.b ENSGT00950000182755.b.a.a.b.a.b.a.b.b.a.a.c ENSGT00950000182755.b.a.a.b.a.b.a.a.a ENSGT00950000182755.b.a.a.b.a.b.b.a.a ENSGT00940000163407.k ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Northern American deer mouse MODERN SPECIES 8 Slc18a1 (ENSPEMG00000020298) Atp6v1b2 (ENSPEMG00000020584) Lzts1 (ENSPEMG00000028719) ENSPEMG00000029670 ENSPEMG00000026879 ENSPEMG00000021118 ENSPEMG00000027049 ENSPEMG00000028206 ENSPEMG00000028359 Zfp709 (ENSPEMG00000022834) Zfp882 (ENSPEMG00000022183) ENSPEMG00000021925 Cyp4f18 (ENSPEMG00000023609) ENSPEMG00000024895 Or1ab2 (ENSPEMG00000012155) Tpm4 (ENSPEMG00000023475) ##22 Rab8a (ENSPEMG00000016695) Hsh2d (ENSPEMG00000023449) Cib3 (ENSPEMG00000008205) Fam32a (ENSPEMG00000029420) Ap1m1 (ENSPEMG00000023037) Klf2 (ENSPEMG00000009733) Eps15l1 (ENSPEMG00000023577) Calr3 (ENSPEMG00000023150) 1700030K09Rik (ENSPEMG00000000757) Cherp (ENSPEMG00000011238) Slc35e1 (ENSPEMG00000027717) ENSPEMG00000004236 Smim7 (ENSPEMG00000023935) Tmem38a (ENSPEMG00000011307) Nwd1 (ENSPEMG00000023600) Prairie vole MODERN SPECIES 172 Ints10 (ENSMOCG00000014521) Lpl (ENSMOCG00000001142) Slc18a1 (ENSMOCG00000016998) Atp6v1b2 (ENSMOCG00000000039) Lzts1 (ENSMOCG00000000466) ENSMOCG00000022715 ENSMOCG00000001772 ENSMOCG00000005341 ENSMOCG00000015468 Zfp709 (ENSMOCG00000016350) Zfp882 (ENSMOCG00000000273) Cyp4f18 (ENSMOCG00000002994) Zfp961 (ENSMOCG00000014774) Or1ab2 (ENSMOCG00000005908) Tpm4 (ENSMOCG00000008341) ##22 Rab8a (ENSMOCG00000013837) ENSMOCG00000015954 Cib3 (ENSMOCG00000001749) Primates ANCESTRAL SPECIES 18 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT01100000263561.C.d.b.b ENSGT01100000263561.C.d.a ENSGT01060000248581.A.b ENSGT00940000163407 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Strepsirrhini ANCESTRAL SPECIES 33 ENSGT00940000154227.b ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000162790.a ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n.g.a ENSGT00940000163407 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259.f ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Bushbaby MODERN SPECIES 220 CYP4F22 (ENSOGAG00000030936) CYP4F3 (ENSOGAG00000032860) CYP4F111 (ENSOGAG00000002017) CYP4F112 (ENSOGAG00000031204) ENSOGAG00000028565 CYP4F113 (ENSOGAG00000007410) CYP4F115 (ENSOGAG00000011748) ENSOGAG00000033148 ENSOGAG00000015917 ENSOGAG00000029461 CYP4F116 (ENSOGAG00000002437) ENSOGAG00000031152 CYP4F117 (ENSOGAG00000033275) ENSOGAG00000000475 ENSOGAG00000025170 TPM4 (ENSOGAG00000013891) ##22 RAB8A (ENSOGAG00000013894) HSH2D (ENSOGAG00000011948) CIB3 (ENSOGAG00000026348) ENSOGAG00000027763 AP1M1 (ENSOGAG00000016047) KLF2 (ENSOGAG00000030297) EPS15L1 (ENSOGAG00000008456) CALR3 (ENSOGAG00000005827) C19orf44 (ENSOGAG00000005830) CHERP (ENSOGAG00000005834) SLC35E1 (ENSOGAG00000005840) MED26 (ENSOGAG00000034820) SMIM7 (ENSOGAG00000032634) TMEM38A (ENSOGAG00000005846) NWD1 (ENSOGAG00000006070) Lemuriformes ANCESTRAL SPECIES 45 ENSGT00940000158035 ENSGT00800000125293 ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000162790.a ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT01100000263561.C.d.a ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259.f ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Lemuriformes_a ANCESTRAL SPECIES 185 ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259.f ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Greater bamboo lemur MODERN SPECIES 1485 ENSPSMG00000019287 ENSPSMG00000019286 TPM4 (ENSPSMG00000018989) ##22 RAB8A (ENSPSMG00000018775) ENSPSMG00000018732 CIB3 (ENSPSMG00000018727) FAM32A (ENSPSMG00000018717) AP1M1 (ENSPSMG00000018507) KLF2 (ENSPSMG00000018361) EPS15L1 (ENSPSMG00000018297) CALR3 (ENSPSMG00000018218) C19orf44 (ENSPSMG00000018212) CHERP (ENSPSMG00000018184) SLC35E1 (ENSPSMG00000018119) MED26 (ENSPSMG00000018105) SMIM7 (ENSPSMG00000018093) TMEM38A (ENSPSMG00000018074) Coquerels sifaka MODERN SPECIES 935 TPM4 (ENSPCOG00000020911) ##22 RAB8A (ENSPCOG00000023579) ENSPCOG00000016729 CIB3 (ENSPCOG00000016100) FAM32A (ENSPCOG00000007093) AP1M1 (ENSPCOG00000021065) KLF2 (ENSPCOG00000024748) EPS15L1 (ENSPCOG00000028803) CALR3 (ENSPCOG00000018074) C19orf44 (ENSPCOG00000020058) CHERP (ENSPCOG00000022788) Mouse lemur MODERN SPECIES 20 ILVBL (ENSMICG00000005896) NOTCH3 (ENSMICG00000014208) EPHX3 (ENSMICG00000014256) ENSMICG00000014267 AKAP8 (ENSMICG00000012702) AKAP8L (ENSMICG00000027945) ENSMICG00000012764 RASAL3 (ENSMICG00000032437) PGLYRP2 (ENSMICG00000012782) CYP4F22 (ENSMICG00000026659) CYP4F152 (ENSMICG00000030878) ENSMICG00000017526 ENSMICG00000007563 CYP4F168 (ENSMICG00000027403) ENSMICG00000033202 TPM4 (ENSMICG00000036790) ##22 RAB8A (ENSMICG00000035390) HSH2D (ENSMICG00000045419) ALPK1 (ENSMICG00000003431) AP1AR (ENSMICG00000041446) FAM241A (ENSMICG00000048071) PITX2 (ENSMICG00000002070) ENPEP (ENSMICG00000042642) ENSMICG00000045345 ELOVL6 (ENSMICG00000045952) LRIT3 (ENSMICG00000036410) RRH (ENSMICG00000038685) GAR1 (ENSMICG00000003326) CFI (ENSMICG00000003323) PLA2G12A (ENSMICG00000010304) CASP6 (ENSMICG00000010297) Haplorrhini ANCESTRAL SPECIES 14 ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT01100000263561.C.d.b.a ENSGT01100000263561.C.d.a ENSGT01060000248581.A.b ENSGT00940000163407 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Simiiformes ANCESTRAL SPECIES 13 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C.n.a ENSGT00940000163718 ENSGT00940000164421 ENSGT00940000154646.C.n.b ENSGT01100000263561.C.d.a ENSGT01060000248581.A.b ENSGT00940000163407 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Platyrrhini ANCESTRAL SPECIES 4 ENSGT00390000004542 ENSGT00390000008920.c.a ENSGT00950000182834.A.a.a ENSGT00390000004717 ENSGT00940000159502 ENSGT00940000156065 ENSGT00390000013444.a.a ENSGT00390000008666.d ENSGT00940000154859 ENSGT01020000230346.A.cb.a ENSGT00390000007753.b ENSGT00940000153986.a ENSGT01100000263561.C.d.a ENSGT00940000154646.C.n.b ENSGT00940000164421 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT01050000244902.b.c.b ENSGT00390000001424.sb ENSGT00940000157901 ENSGT00390000005163 ENSGT01100000263497.C ENSGT00940000155517.e ENSGT00940000155959.m.b ENSGT00940000154071.A ENSGT00950000183148.a ENSGT00940000161597 ENSGT00660000095541.a.b ENSGT00940000156106 ENSGT00940000158704 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1316 ENSANAG00000031350 CYP4F12 (ENSANAG00000032717) CYP4F2 (ENSANAG00000028195) CYP4F11 (ENSANAG00000031558) ENSANAG00000034225 ##22 RAB8A (ENSANAG00000026616) HSH2D (ENSANAG00000022686) CIB3 (ENSANAG00000033653) FAM32A (ENSANAG00000032178) AP1M1 (ENSANAG00000019994) KLF2 (ENSANAG00000034393) EPS15L1 (ENSANAG00000026881) CALR3 (ENSANAG00000033229) C19orf44 (ENSANAG00000019043) CHERP (ENSANAG00000024284) ENSANAG00000013537 MED26 (ENSANAG00000021924) ENSANAG00000028089 SMIM7 (ENSANAG00000023711) TMEM38A (ENSANAG00000030420) Mas night monkey MODERN SPECIES 273 CGRRF1 (ENSANAG00000036449) GMFB (ENSANAG00000033336) CNIH1 (ENSANAG00000035095) CDKN3 (ENSANAG00000025185) ENSANAG00000037804 BMP4 (ENSANAG00000035952) ENSANAG00000032151 ENSANAG00000028553 DDHD1 (ENSANAG00000030834) FERMT2 (ENSANAG00000031245) GNPNAT1 (ENSANAG00000021737) STYX (ENSANAG00000029545) PSMC6 (ENSANAG00000033668) ERO1A (ENSANAG00000035976) GPR137C (ENSANAG00000022746) ENSANAG00000001005 ##22 TXNDC16 (ENSANAG00000037098) PTGER2 (ENSANAG00000033131) PTGDR (ENSANAG00000024105) ENSANAG00000035532 NID2 (ENSANAG00000029554) ENSANAG00000026484 GNG2 (ENSANAG00000033811) FRMD6 (ENSANAG00000033892) ENSANAG00000022304 TRIM9 (ENSANAG00000033521) ABHD12B (ENSANAG00000030683) PYGL (ENSANAG00000021614) Mas night monkey MODERN SPECIES 1190 ENSANAG00000025742 ENSANAG00000027108 B4GALNT3 (ENSANAG00000035330) NINJ2 (ENSANAG00000021541) WNK1 (ENSANAG00000026928) RAD52 (ENSANAG00000023935) ENSANAG00000023694 ENSANAG00000019544 ##22 ERC1 (ENSANAG00000037363) Cebidae ANCESTRAL SPECIES 3 ENSGT00940000157933 ENSGT00390000004542 ENSGT00390000008920.c.a ENSGT00950000182834.A.a.a ENSGT00390000004717 ENSGT00940000159502 ENSGT00940000156065 ENSGT00390000013444.a.a ENSGT00390000008666.d ENSGT00940000154859 ENSGT01020000230346.A.cb.a ENSGT00390000007753.b ENSGT00940000153986.a ENSGT00940000154646.C.n.a.b ENSGT00940000164421 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT01050000244902.b.c.b ENSGT00940000157901 ENSGT00390000005163 ENSGT01100000263497.C ENSGT00940000155517.e ENSGT00940000155959.m.b ENSGT00940000154071.A ENSGT00950000183148.a ENSGT00940000161597 ENSGT00660000095541.a.b ENSGT00940000156106 ENSGT00940000158704 ENSGT00940000158072 Marmoset DUPLICATION Marmoset MODERN SPECIES 14 RASAL3 (ENSCJAG00000002291) AKAP8L (ENSCJAG00000002227) AKAP8 (ENSCJAG00000002212) BRD4 (ENSCJAG00000002178) EPHX3 (ENSCJAG00000002169) NOTCH3 (ENSCJAG00000002121) ILVBL (ENSCJAG00000002096) SYDE1 (ENSCJAG00000002073) ENSCJAG00000009484 ENSCJAG00000070632 CYP4F12 (ENSCJAG00000075042) ENSCJAG00000023176 ENSCJAG00000039185 ENSCJAG00000023177 CYP4F2 (ENSCJAG00000042753) ENSCJAG00000014135 ##22 RAB8A (ENSCJAG00000039886) HSH2D (ENSCJAG00000044690) CIB3 (ENSCJAG00000014103) FAM32A (ENSCJAG00000014097) AP1M1 (ENSCJAG00000014070) KLF2 (ENSCJAG00000045561) EPS15L1 (ENSCJAG00000013985) CALR3 (ENSCJAG00000013978) C19orf44 (ENSCJAG00000013966) CHERP (ENSCJAG00000040462) SLC35E1 (ENSCJAG00000013952) MED26 (ENSCJAG00000013939) ENSCJAG00000083081 SMIM7 (ENSCJAG00000013936) TMEM38A (ENSCJAG00000013929) Marmoset MODERN SPECIES 1 ENSCJAG00000007312 ENSCJAG00000038806 ENSCJAG00000081091 CDKN3 (ENSCJAG00000007280) DNAJC7 (ENSCJAG00000035699) BMP4 (ENSCJAG00000054138) DDHD1 (ENSCJAG00000007229) ENSCJAG00000081277 ENSCJAG00000072490 FERMT2 (ENSCJAG00000007170) GNPNAT1 (ENSCJAG00000039720) STYX (ENSCJAG00000042227) ENSCJAG00000007126 ERO1A (ENSCJAG00000007097) GPR137C (ENSCJAG00000007087) ENSCJAG00000053304 ##22 TXNDC16 (ENSCJAG00000007050) PTGER2 (ENSCJAG00000007034) ENSCJAG00000070830 ENSCJAG00000082506 ENSCJAG00000052183 PTGDR (ENSCJAG00000007025) NID2 (ENSCJAG00000006959) RTRAF (ENSCJAG00000006926) GNG2 (ENSCJAG00000085121) ENSCJAG00000073760 ENSCJAG00000074761 FRMD6 (ENSCJAG00000006907) ENSCJAG00000076706 ENSCJAG00000082915 ENSCJAG00000042060 Cebidae_a ANCESTRAL SPECIES 31 ENSGT00390000004542 ENSGT00390000008920.c.a ENSGT00950000182834.A.a.a ENSGT00390000004717 ENSGT00940000159502 ENSGT00940000156065 ENSGT00390000013444.a.a ENSGT00390000008666.d ENSGT00940000154859 ENSGT01020000230346.A.cb.a ENSGT00390000007753.b ENSGT00940000153986.a ENSGT00390000006080 ENSGT00940000154646.C.n.a.b ENSGT00940000164421 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT01050000244902.b.c.a ENSGT01050000244902.b.c.b ENSGT00940000157901 ENSGT00390000005163 ENSGT01100000263497.C ENSGT00940000155517.e ENSGT00940000155959.m.b ENSGT00940000154071.A ENSGT00950000183148.a ENSGT00940000161597 ENSGT00660000095541.a.b ENSGT00940000156106 ENSGT00940000158704 ENSGT00940000158072 ENSGT00940000159132.a Capuchin DUPLICATION Capuchin MODERN SPECIES 280 ENSCCAG00000020079 ##22 RAB8A (ENSCCAG00000029769) HSH2D (ENSCCAG00000028530) CIB3 (ENSCCAG00000036781) FAM32A (ENSCCAG00000030893) AP1M1 (ENSCCAG00000024452) KLF2 (ENSCCAG00000026117) EPS15L1 (ENSCCAG00000035378) ENSCCAG00000033129 CALR3 (ENSCCAG00000029775) C19orf44 (ENSCCAG00000026019) CHERP (ENSCCAG00000031534) SLC35E1 (ENSCCAG00000031022) MED26 (ENSCCAG00000037166) SMIM7 (ENSCCAG00000022178) TMEM38A (ENSCCAG00000028253) Capuchin MODERN SPECIES 472 DDHD1 (ENSCCAG00000021731) ENSCCAG00000022040 FERMT2 (ENSCCAG00000022341) GNPNAT1 (ENSCCAG00000037420) STYX (ENSCCAG00000021821) PSMC6 (ENSCCAG00000032837) ERO1A (ENSCCAG00000029771) GPR137C (ENSCCAG00000029697) TXNDC16 (ENSCCAG00000033371) ENSCCAG00000031355 ##22 PTGER2 (ENSCCAG00000024716) PTGDR (ENSCCAG00000021439) ENSCCAG00000035422 NID2 (ENSCCAG00000024531) RTRAF (ENSCCAG00000032093) GNG2 (ENSCCAG00000028948) ENSCCAG00000036892 Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 199 CYP4F3 (ENSSBOG00000005231) CYP4F12 (ENSSBOG00000025457) CYP4F71 (ENSSBOG00000025549) CYP4F2 (ENSSBOG00000031722) CYP4F11 (ENSSBOG00000000063) ENSSBOG00000024488 ##22 RAB8A (ENSSBOG00000023878) ENSSBOG00000027887 FAM32A (ENSSBOG00000035347) AP1M1 (ENSSBOG00000029089) ENSSBOG00000027797 EPS15L1 (ENSSBOG00000026422) ENSSBOG00000036135 CALR3 (ENSSBOG00000029074) CHERP (ENSSBOG00000014492) MED26 (ENSSBOG00000024207) ENSSBOG00000032742 SMIM7 (ENSSBOG00000031649) TMEM38A (ENSSBOG00000026791) NWD1 (ENSSBOG00000030232) SIN3B (ENSSBOG00000025410) Bolivian squirrel monkey MODERN SPECIES 80 GCH1 (ENSSBOG00000025939) SAMD4A (ENSSBOG00000022006) CGRRF1 (ENSSBOG00000025623) GMFB (ENSSBOG00000035491) CNIH1 (ENSSBOG00000031293) CDKN3 (ENSSBOG00000023960) BMP4 (ENSSBOG00000018224) ENSSBOG00000022578 FERMT2 (ENSSBOG00000022435) ENSSBOG00000027966 STYX (ENSSBOG00000033294) PSMC6 (ENSSBOG00000022172) ERO1A (ENSSBOG00000025027) GPR137C (ENSSBOG00000024278) TXNDC16 (ENSSBOG00000022684) ENSSBOG00000021939 ##22 PTGER2 (ENSSBOG00000001804) PTGDR (ENSSBOG00000031009) NID2 (ENSSBOG00000023624) ENSSBOG00000026584 GNG2 (ENSSBOG00000028301) FRMD6 (ENSSBOG00000023137) ENSSBOG00000023315 TRIM9 (ENSSBOG00000020908) ENSSBOG00000029147 PYGL (ENSSBOG00000008590) ABHD12B (ENSSBOG00000032718) NIN (ENSSBOG00000033179) SAV1 (ENSSBOG00000026490) ATL1 (ENSSBOG00000021977) MAP4K5 (ENSSBOG00000033531) Catarrhini ANCESTRAL SPECIES ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C.n.a ENSGT00940000163718.a.a ENSGT00940000154646.C.m ENSGT01100000263561.C.d.b.a ENSGT01100000263561.C.d.a.b.b ENSGT01060000248581.A.b ENSGT01100000263561.C.d.a.b.a ENSGT01100000263561.C.d.a.a ENSGT00940000154646.C.n.b ENSGT00940000164421 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Cercopithecidae ANCESTRAL SPECIES 17 ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00900000143687 ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n.f ENSGT00940000155021.n.e ENSGT00940000154646.C.n.a ENSGT00940000163718.a.a ENSGT00940000164421.d ENSGT01100000263561.C.d.b.a ENSGT00940000164421.c ENSGT01060000248581.A.b ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Cercopithecinae ANCESTRAL SPECIES 1 ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00900000143687 ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n.f ENSGT00940000155021.n.e ENSGT00940000154646.C.n.a ENSGT00940000163718.a.a.b ENSGT00940000164421.d ENSGT01100000263561.C.d.b.a ENSGT00940000164421.c ENSGT01060000248581.A.b ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Vervet Monkey MODERN SPECIES 25 AKAP8L (ENSCSAG00000006087) ENSCSAG00000006081 RASAL3 (ENSCSAG00000006077) PGLYRP2 (ENSCSAG00000006074) CYP4F22 (ENSCSAG00000006063) CYP4F23 (ENSCSAG00000006040) CYP4F8 (ENSCSAG00000006000) CYP4F3 (ENSCSAG00000005964) CYP4F57 (ENSCSAG00000005936) CYP4F12 (ENSCSAG00000005864) OR10H2 (ENSCSAG00000018490) ENSCSAG00000018492 OR10H5 (ENSCSAG00000018494) OR10H1 (ENSCSAG00000018496) CYP4F11 (ENSCSAG00000005793) TPM4 (ENSCSAG00000005785) ##22 RAB8A (ENSCSAG00000005783) HSH2D (ENSCSAG00000005778) CIB3 (ENSCSAG00000005772) FAM32A (ENSCSAG00000005769) AP1M1 (ENSCSAG00000005766) KLF2 (ENSCSAG00000005764) EPS15L1 (ENSCSAG00000005759) CALR3 (ENSCSAG00000005752) C19orf44 (ENSCSAG00000005750) CHERP (ENSCSAG00000005740) SLC35E1 (ENSCSAG00000005715) MED26 (ENSCSAG00000005707) TMEM38A (ENSCSAG00000005703) NWD1 (ENSCSAG00000005700) SIN3B (ENSCSAG00000005690) Cercopithecinae_a DUPLICATION Cercopithecinae_a DUPLICATION Cercopithecinae_a ANCESTRAL SPECIES 21 ENSGT01020000230346.E.s.b.b ENSGT00390000011654 ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT01050000244995 ENSGT00940000155402.a.b ENSGT01030000234626.D ENSGT00940000159394 ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a ENSGT00950000183010.a.a.a.b.a.a.b.b ENSGT00390000018741 ENSGT00390000008772 ENSGT00940000159872 ENSGT00940000153432.A.b ENSGT01100000264016 ENSGT01030000234542.b.b.a.a.a.b.t.a ##22 ENSGT00940000159814 ENSGT00940000153499.a ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 ENSGT00940000157302 ENSGT00390000002428.a.g.b.a.a ENSGT01030000234539.a.a.b.b ENSGT01030000234535.C ENSGT00390000018830 ENSGT00940000156997 ENSGT00390000016167.g ENSGT00390000006029 ENSGT00550000074846.i ENSGT00440000033919.b Cercopithecinae_b ANCESTRAL SPECIES 25 ENSGT00940000161642 ENSGT00940000159850 ENSGT00390000011654 ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT01050000244995 ENSGT00940000155402.a.b ENSGT01030000234626.D ENSGT00940000159394 ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a ENSGT00390000018741 ENSGT00390000008772 ENSGT00940000159872 ENSGT00940000153432.A.b ENSGT01100000264016 ENSGT01030000234542.b.b.a.a.a.b.t.a ##22 ENSGT00940000159814 ENSGT00940000153499.a ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 ENSGT00940000157302 ENSGT00390000002428.a.g.b.a.a ENSGT01030000234539.a.a.b.b ENSGT01030000234535.C ENSGT00390000018830 ENSGT00940000156997 ENSGT00390000016167.g ENSGT00390000006029 ENSGT00550000074846.i ENSGT00940000158788 Cercopithecinae_d ANCESTRAL SPECIES 40 ENSGT00390000004856.w.a.a.b.b.a.b.b.a.b ENSGT01020000230346.E.s.b.b ENSGT00390000011654 ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT01050000244995 ENSGT00940000155402.a.b ENSGT01030000234626.D ENSGT00940000159394 ENSGT00950000183010.a.a.a.b.a.a.b.b ENSGT00390000018741 ENSGT00390000008772 ENSGT00940000159872 ENSGT00940000153432.A.b ENSGT01100000264016 ENSGT01030000234542.b.b.a.a.a.b.t.a ##22 ENSGT00940000159814 ENSGT00940000153499.a ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 ENSGT00940000157302 ENSGT00390000002428.a.g.b.a.a ENSGT01030000234539.a.a.b.b ENSGT01030000234535.C ENSGT00390000018830 ENSGT00940000156997 ENSGT00390000016167.g ENSGT00390000006029 ENSGT00550000074846.i ENSGT00940000158788 Sooty mangabey MODERN SPECIES 190 SKA1 (ENSCATG00000039979) CXXC1 (ENSCATG00000035708) MBD1 (ENSCATG00000029959) CFAP53 (ENSCATG00000026928) MYO5B (ENSCATG00000038137) ACAA2 (ENSCATG00000031450) LIPG (ENSCATG00000033603) ENSCATG00000043658 ENSCATG00000037257 ENSCATG00000018328 DYM (ENSCATG00000031272) ENSCATG00000037245 SMAD7 (ENSCATG00000037681) CTIF (ENSCATG00000038134) ENSCATG00000045052 ENSCATG00000005038 ##22 ZBTB7C (ENSCATG00000044413) SMAD2 (ENSCATG00000003842) SKOR2 (ENSCATG00000035815) IER3IP1 (ENSCATG00000035811) HDHD2 (ENSCATG00000035277) KATNAL2 (ENSCATG00000037094) ELOA2 (ENSCATG00000032113) PIAS2 (ENSCATG00000034031) ST8SIA5 (ENSCATG00000030338) LOXHD1 (ENSCATG00000036618) RNF165 (ENSCATG00000037696) C18orf25 (ENSCATG00000039068) HAUS1 (ENSCATG00000025348) ATP5F1A (ENSCATG00000025898) PSTPIP2 (ENSCATG00000033892) Macaca ANCESTRAL SPECIES 22 ENSGT01020000230346.E.s.b.b ENSGT00390000011654 ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT01050000244995 ENSGT00940000155402.a.b ENSGT01030000234626.D ENSGT00940000159394 ENSGT00950000183010.a.a.a.b.a.a.a.a.b.b ENSGT00950000183010.a.a.a.b.a.a.b.b ENSGT00390000018741 ENSGT00390000008772 ENSGT00940000159872 ENSGT00940000153432.A.b ENSGT01100000264016 ENSGT01030000234542.b.b.a.a.a.b.t.a ##22 ENSGT00940000159814 ENSGT00940000153499.a ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 ENSGT00940000157302 ENSGT00390000002428.a.g.b.a.a.a ENSGT01030000234539.a.a.b.b ENSGT01030000234535.C ENSGT00390000018830 ENSGT00940000156997 ENSGT00390000016167.g ENSGT00390000006029 ENSGT00550000074846.i ENSGT00440000033919.b Macaca_a ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.t.a ##22 Rhesus MODERN SPECIES 1 NCF4 (ENSMMUG00000008160) PVALB (ENSMMUG00000008778) IFT27 (ENSMMUG00000008775) ENSMMUG00000060260 CACNG2 (ENSMMUG00000031026) ENSMMUG00000062743 EIF3D (ENSMMUG00000012754) FOXRED2 (ENSMMUG00000012751) TXN2 (ENSMMUG00000031300) MYH9 (ENSMMUG00000006101) ENSMMUG00000060967 APOL2 (ENSMMUG00000001537) APOL4 (ENSMMUG00000020016) RBFOX2 (ENSMMUG00000014010) APOL5 (ENSMMUG00000048463) ENSMMUG00000047203 ##22 APOL6 (ENSMMUG00000001050) MB (ENSMMUG00000005034) RASD2 (ENSMMUG00000061659) MCM5 (ENSMMUG00000021054) HMOX1 (ENSMMUG00000007221) TOM1 (ENSMMUG00000013383) HMGXB4 (ENSMMUG00000012011) ISX (ENSMMUG00000061326) LARGE1 (ENSMMUG00000012113) ENSMMUG00000054691 ENSMMUG00000063041 ENSMMUG00000062246 SYN3 (ENSMMUG00000006732) TIMP3 (ENSMMUG00000062825) FBXO7 (ENSMMUG00000006728) Pig-tailed macaque MODERN SPECIES 155 ENSMNEG00000000269 MAPK4 (ENSMNEG00000038618) SKA1 (ENSMNEG00000029687) CXXC1 (ENSMNEG00000028715) MBD1 (ENSMNEG00000038822) CFAP53 (ENSMNEG00000015915) MYO5B (ENSMNEG00000033529) ACAA2 (ENSMNEG00000037789) LIPG (ENSMNEG00000043610) ENSMNEG00000035945 C18orf32 (ENSMNEG00000037414) DYM (ENSMNEG00000030545) SMAD7 (ENSMNEG00000039694) CTIF (ENSMNEG00000039395) ENSMNEG00000045230 ENSMNEG00000034460 ##22 ZBTB7C (ENSMNEG00000031886) SMAD2 (ENSMNEG00000037330) ENSMNEG00000038031 IER3IP1 (ENSMNEG00000030543) ENSMNEG00000038574 KATNAL2 (ENSMNEG00000029817) ENSMNEG00000040070 Cercopithecinae_a ANCESTRAL SPECIES 15 ENSGT00910000147192 ENSGT00390000004915.b ENSGT00390000017888 ENSGT00390000005606 ENSGT00910000148658 ENSGT00940000157913 ENSGT01010000222313.A.a ENSGT00860000136037 ENSGT00940000153798.A.a ENSGT00940000161983 ENSGT00950000183878 ENSGT00960000187072 ENSGT00940000157057 ENSGT00940000155701.D ENSGT00910000147725 ENSGT01030000234542.b.b.a.a.a.b.t.b ##22 ENSGT00390000018842 ENSGT00390000015930.y.a.b.b ENSGT00940000158430 ENSGT00950000182836.b.a.a ENSGT01070000253766.A.a.a.b ENSGT00390000017014 ENSGT00940000153268.i.a ENSGT00940000153268.j.a.a.a.b.b.a.b.a.b ENSGT00940000153268.j.a.a.a.b.b.b ENSGT00940000153268.j.a.a.b ENSGT00940000153268.i.b.b.a.b.b ENSGT00940000153268.i.b.b.a.b.a ENSGT00940000153268.i.b.b.b.b ENSGT00530000064280 ENSGT00940000161432.a Macaca ANCESTRAL SPECIES 14 ENSGT00910000147192 ENSGT00390000004915.b ENSGT00390000017888 ENSGT00390000005606 ENSGT00910000148658 ENSGT00940000157913 ENSGT01010000222313.A.a ENSGT00860000136037 ENSGT00940000153798.A.a ENSGT00940000161983 ENSGT00950000183878 ENSGT00960000187072 ENSGT00940000157057 ENSGT00940000155701.D ENSGT00910000147725 ENSGT01030000234542.b.b.a.a.a.b.t.b ##22 ENSGT00390000018842 ENSGT00390000015930.y.a.b.b ENSGT00940000158430 ENSGT00950000182836.b.a.a ENSGT01070000253766.A.a.a.b ENSGT00390000017014 ENSGT00940000153268.i.a ENSGT00940000153268.j.a.a.a.b.b.a.b.a.b ENSGT00940000153268.j.a.a.a.b.b.b ENSGT00940000153268.j.a.a.b ENSGT00940000153268.i.b.b.a.b.b.a ENSGT00940000165346.b.a.b ENSGT00530000064280 ENSGT00940000161432.a ENSGT00940000164302 Pig-tailed macaque MODERN SPECIES 323 ENSMNEG00000006005 ##22 ANGPT2 (ENSMNEG00000033040) MCPH1 (ENSMNEG00000032359) AGPAT5 (ENSMNEG00000032125) XKR5 (ENSMNEG00000032012) DEFB1 (ENSMNEG00000031950) DEFA6 (ENSMNEG00000033347) ENSMNEG00000005503 ENSMNEG00000031128 ENSMNEG00000030250 ENSMNEG00000022820 Macaca_a ANCESTRAL SPECIES 16 ENSGT00940000154559.C ENSGT00390000004915.b ENSGT00390000017888 ENSGT00390000005606 ENSGT00910000148658 ENSGT00940000157913 ENSGT01010000222313.A.a ENSGT00860000136037 ENSGT00940000153798.A.a ENSGT00940000157057 ENSGT00950000182802.A.a.a.e.a.a.b ENSGT00940000155701.D ENSGT01100000263915.A ENSGT01030000234542.b.b.a.a.a.b.t.b ##22 ENSGT00390000018842 ENSGT00390000015930.y.a.b.b ENSGT00940000158430 ENSGT00950000182836.b.a.a ENSGT01070000253766.A.a.a.b ENSGT00390000017014 ENSGT00940000153268.i.a ENSGT00940000153268.j.a.a.a.b.b.a.b.a.b ENSGT00940000153268.j.a.a.a.b.b.b ENSGT00940000153268.j.a.a.b ENSGT00940000153268.i.b.b.a.b.b.b ENSGT00940000165346.b.a.b ENSGT00530000064280 ENSGT00940000161432.a ENSGT00940000164302 Crab-eating macaque MODERN SPECIES 18 ENSMFAG00000065472 DLGAP2 (ENSMFAG00000034180) CLN8 (ENSMFAG00000043425) ENSMFAG00000062450 ARHGEF10 (ENSMFAG00000016956) ENSMFAG00000054839 MYOM2 (ENSMFAG00000033265) ENSMFAG00000023617 ENSMFAG00000050847 ENSMFAG00000057663 ENSMFAG00000065406 ENSMFAG00000051283 ENSMFAG00000054222 ENSMFAG00000061348 ENSMFAG00000062441 ENSMFAG00000001012 ##22 MCPH1 (ENSMFAG00000043546) ENSMFAG00000000998 ANGPT2 (ENSMFAG00000044644) AGPAT5 (ENSMFAG00000034052) XKR5 (ENSMFAG00000036702) DEFB1 (ENSMFAG00000038486) ENSMFAG00000061726 DEFA6 (ENSMFAG00000046139) ENSMFAG00000043176 ENSMFAG00000003666 ENSMFAG00000033218 ENSMFAG00000036101 ENSMFAG00000035365 ENSMFAG00000038048 ENSMFAG00000000362 Cercopithecinae_b ANCESTRAL SPECIES 54 ENSGT00940000154559.C ENSGT00910000147192 ENSGT00390000004915.b ENSGT00390000017888 ENSGT00390000005606 ENSGT00940000157913 ENSGT01010000222313.A.a ENSGT00860000136037 ENSGT00940000153798.A.a ENSGT00940000161983 ENSGT00950000183878 ENSGT00960000187072 ENSGT00940000157057 ENSGT00950000182802.A.a.a.e.a.a.b ENSGT00940000155701.D ENSGT01030000234542.b.b.a.a.a.b.t.b ##22 ENSGT00390000018842 ENSGT00390000015930.y.a.b.b ENSGT00940000158430 ENSGT00950000182836.b.a.a ENSGT01070000253766.A.a.a.b ENSGT00390000017014 ENSGT00940000153268.i.a ENSGT00940000153268.j.a.a.a.a ENSGT00940000153268.j.a.a.a.b.b.a.b.b ENSGT00940000153268.j.a.a.a.b.b.a.b.a.b ENSGT00940000153268.j.a.a.a.b.b.b ENSGT00940000153268.j.a.a.b ENSGT00940000153268.i.b.a.b ENSGT00400000023423 ENSGT00940000165346.b.b Cercopithecinae_d ANCESTRAL SPECIES 154 ENSGT00940000155701.D ENSGT01030000234542.b.b.a.a.a.b.t.b ##22 ENSGT00390000018842 ENSGT00390000015930.y.a.b.b ENSGT00940000158430 ENSGT00950000182836.b.a.a ENSGT01070000253766.A.a.a.b ENSGT00390000017014 ENSGT00940000153268.i.a ENSGT00940000153268.j.a.a.a.b.b.a.b.a.a ENSGT00650000094180 ENSGT00940000153268.j.a.a.a.a ENSGT00940000153268.j.a.a.a.b.b.a.b.b ENSGT00940000153268.j.a.a.a.b.b.b ENSGT00940000153268.j.a.a.b ENSGT00940000153268.i.b.a.b ENSGT00400000023423 Sooty mangabey MODERN SPECIES 219 ENSCATG00000022438 CSMD1 (ENSCATG00000026643) ENSCATG00000034348 ##22 MCPH1 (ENSCATG00000031870) ENSCATG00000032670 ANGPT2 (ENSCATG00000034913) AGPAT5 (ENSCATG00000038252) XKR5 (ENSCATG00000031740) DEFB1 (ENSCATG00000031045) DEFA6 (ENSCATG00000033394) ENSCATG00000034902 ENSCATG00000037813 ENSCATG00000030701 ENSCATG00000004670 ENSCATG00000030558 ENSCATG00000029398 Drill MODERN SPECIES 1276 ENSMLEG00000032804 ##22 Olive baboon MODERN SPECIES 18 ZNF596 (ENSPANG00000024623) FBXO25 (ENSPANG00000021306) TDRP (ENSPANG00000005417) ERICH1 (ENSPANG00000010203) DLGAP2 (ENSPANG00000008566) CLN8 (ENSPANG00000021588) ENSPANG00000032073 ARHGEF10 (ENSPANG00000010202) KBTBD11 (ENSPANG00000023887) MYOM2 (ENSPANG00000022911) ENSPANG00000030862 CSMD1 (ENSPANG00000022093) ENSPANG00000044833 ENSPANG00000031792 ##22 GLUD1 (ENSPANG00000051254) ENSPANG00000043141 ENSPANG00000045781 ENSPANG00000049241 ENSPANG00000041513 ENSPANG00000044175 MCPH1 (ENSPANG00000007439) ANGPT2 (ENSPANG00000006769) AGPAT5 (ENSPANG00000022332) BTDA (ENSPANG00000049195) ENSPANG00000013424 BTDC (ENSPANG00000046278) DEFA6 (ENSPANG00000006175) DEFB1 (ENSPANG00000000904) XKR5 (ENSPANG00000011032) Cercopithecinae_a ANCESTRAL SPECIES 3 ENSGT00940000158035 ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00900000143687 ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n.f ENSGT01100000263561.C.d.b.a ENSGT00940000164421.c ENSGT01060000248581.A.b.l ENSGT01030000234542.b.b.a.a.a.b.u ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Cercopithecinae_b ANCESTRAL SPECIES 13 ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00900000143687 ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n.f ENSGT00940000154227.b ENSGT00940000154646.C.n.b ENSGT00940000164421.c ENSGT01060000248581.A.b.l ENSGT01030000234542.b.b.a.a.a.b.u ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b.d ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Cercopithecinae_d ANCESTRAL SPECIES 8 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00900000143687.b ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n.e ENSGT00940000154646.C.n.a ENSGT00940000163718.a.a.b ENSGT00940000163718.a.a.a.a.b ENSGT00940000154227.b ENSGT00940000154646.C.n.b ENSGT00940000164421.c ENSGT01030000234542.b.b.a.a.a.b.u ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b.d ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Sooty mangabey DUPLICATION Sooty mangabey MODERN SPECIES 347 BRD4 (ENSCATG00000003569) AKAP8 (ENSCATG00000043874) AKAP8L (ENSCATG00000039160) WIZ (ENSCATG00000038696) RASAL3 (ENSCATG00000031261) PGLYRP2 (ENSCATG00000038760) CYP4F22 (ENSCATG00000032634) CYP4F8 (ENSCATG00000041673) CYP4F3 (ENSCATG00000044103) CYP4F57 (ENSCATG00000033277) ENSCATG00000042538 ENSCATG00000037787 ENSCATG00000036903 ENSCATG00000039895 CYP4F11 (ENSCATG00000021165) ENSCATG00000023357 ##22 RAB8A (ENSCATG00000043707) HSH2D (ENSCATG00000023779) CIB3 (ENSCATG00000029629) FAM32A (ENSCATG00000042554) AP1M1 (ENSCATG00000042458) KLF2 (ENSCATG00000043747) EPS15L1 (ENSCATG00000033150) CALR3 (ENSCATG00000031211) C19orf44 (ENSCATG00000040878) CHERP (ENSCATG00000031409) SLC35E1 (ENSCATG00000031586) MED26 (ENSCATG00000041612) SMIM7 (ENSCATG00000033433) TMEM38A (ENSCATG00000030391) ENSCATG00000030522 Sooty mangabey MODERN SPECIES 265 ENSCATG00000040101 ##22 HTR1A (ENSCATG00000015367) RNF180 (ENSCATG00000030632) RGS7BP (ENSCATG00000030489) SHISAL2B (ENSCATG00000029849) SREK1IP1 (ENSCATG00000036697) CWC27 (ENSCATG00000032866) ENSCATG00000016784 ADAMTS6 (ENSCATG00000039471) CENPK (ENSCATG00000007280) PPWD1 (ENSCATG00000024760) TRIM23 (ENSCATG00000033930) TRAPPC13 (ENSCATG00000039362) SGTB (ENSCATG00000036776) NLN (ENSCATG00000000449) ENSCATG00000039649 Drill DUPLICATION Drill MODERN SPECIES 794 BRD4 (ENSMLEG00000040205) AKAP8 (ENSMLEG00000034735) AKAP8L (ENSMLEG00000035928) ENSMLEG00000026487 WIZ (ENSMLEG00000039726) RASAL3 (ENSMLEG00000040923) PGLYRP2 (ENSMLEG00000043385) CYP4F22 (ENSMLEG00000035331) CYP4F8 (ENSMLEG00000038600) CYP4F3 (ENSMLEG00000036348) CYP4F57 (ENSMLEG00000042467) ENSMLEG00000030773 ENSMLEG00000030815 CYP4F2 (ENSMLEG00000028150) CYP4F11 (ENSMLEG00000038406) ENSMLEG00000041993 ##22 RAB8A (ENSMLEG00000040856) HSH2D (ENSMLEG00000039334) CIB3 (ENSMLEG00000032337) FAM32A (ENSMLEG00000043309) AP1M1 (ENSMLEG00000037627) ENSMLEG00000042383 ENSMLEG00000027759 ENSMLEG00000038893 Drill MODERN SPECIES 1607 ENSMLEG00000039079 ENSMLEG00000026616 SKA1 (ENSMLEG00000030498) CXXC1 (ENSMLEG00000032181) MBD1 (ENSMLEG00000043121) CFAP53 (ENSMLEG00000010151) MYO5B (ENSMLEG00000030497) ACAA2 (ENSMLEG00000035935) LIPG (ENSMLEG00000028146) RPL17 (ENSMLEG00000041470) C18orf32 (ENSMLEG00000042407) DYM (ENSMLEG00000036447) ENSMLEG00000038861 CTIF (ENSMLEG00000041132) ENSMLEG00000037738 ENSMLEG00000038973 ##22 ZBTB7C (ENSMLEG00000034896) SMAD2 (ENSMLEG00000037596) ENSMLEG00000040989 Drill MODERN SPECIES 1572 ENSMLEG00000031651 ##22 ENSMLEG00000030539 HTR1A (ENSMLEG00000028483) Olive baboon DUPLICATION Olive baboon MODERN SPECIES 12 SYDE1 (ENSPANG00000010522) ILVBL (ENSPANG00000019933) NOTCH3 (ENSPANG00000016653) EPHX3 (ENSPANG00000039806) BRD4 (ENSPANG00000023924) AKAP8L (ENSPANG00000015626) WIZ (ENSPANG00000014329) RASAL3 (ENSPANG00000006034) PGLYRP2 (ENSPANG00000009960) CYP4F22 (ENSPANG00000015625) ENSPANG00000044359 ENSPANG00000049519 CYP4F3 (ENSPANG00000043184) CYP4F11 (ENSPANG00000045986) ENSPANG00000005591 ENSPANG00000008105 ##22 RAB8A (ENSPANG00000031542) HSH2D (ENSPANG00000050187) CIB3 (ENSPANG00000016651) FAM32A (ENSPANG00000007385) AP1M1 (ENSPANG00000026386) KLF2 (ENSPANG00000040729) EPS15L1 (ENSPANG00000010521) CALR3 (ENSPANG00000018584) C19orf44 (ENSPANG00000009377) CHERP (ENSPANG00000011698) SLC35E1 (ENSPANG00000011400) MED26 (ENSPANG00000033826) TMEM38A (ENSPANG00000031300) NWD1 (ENSPANG00000034320) SIN3B (ENSPANG00000004466) Olive baboon MODERN SPECIES 15 PDE4D (ENSPANG00000025038) DEPDC1B (ENSPANG00000014047) ELOVL7 (ENSPANG00000018804) ERCC8 (ENSPANG00000012022) NDUFAF2 (ENSPANG00000011811) SMIM15 (ENSPANG00000034419) ENSPANG00000038225 ENSPANG00000039356 ZSWIM6 (ENSPANG00000007582) KIF2A (ENSPANG00000017745) DIMT1 (ENSPANG00000010901) IPO11 (ENSPANG00000013348) ENSPANG00000033012 ENSPANG00000041895 ENSPANG00000045375 ENSPANG00000041315 ##22 ENSPANG00000043009 ENSPANG00000045218 HTR1A (ENSPANG00000005262) RNF180 (ENSPANG00000015369) RGS7BP (ENSPANG00000016503) SHISAL2B (ENSPANG00000002494) SREK1IP1 (ENSPANG00000033802) CWC27 (ENSPANG00000010789) ENSPANG00000048440 ADAMTS6 (ENSPANG00000012117) CENPK (ENSPANG00000004271) PPWD1 (ENSPANG00000008456) TRIM23 (ENSPANG00000014046) TRAPPC13 (ENSPANG00000010964) SGTB (ENSPANG00000018405) Macaca ANCESTRAL SPECIES 21 ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000154646.C.n.a ENSGT01060000248581.A.b.k ENSGT00940000164421.d ENSGT01100000263561.C.d.b.a ENSGT00940000164421.c ENSGT01060000248581.A.b.l ENSGT01030000234542.b.b.a.a.a.b.u ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Pig-tailed macaque MODERN SPECIES 76 SYDE1 (ENSMNEG00000043619) ILVBL (ENSMNEG00000045029) NOTCH3 (ENSMNEG00000034126) EPHX3 (ENSMNEG00000036655) BRD4 (ENSMNEG00000030222) AKAP8 (ENSMNEG00000032407) AKAP8L (ENSMNEG00000043813) WIZ (ENSMNEG00000028400) RASAL3 (ENSMNEG00000043636) PGLYRP2 (ENSMNEG00000041939) CYP4F22 (ENSMNEG00000035906) ENSMNEG00000044692 CYP4F12 (ENSMNEG00000034120) ENSMNEG00000026973 CYP4F11 (ENSMNEG00000006547) ENSMNEG00000044357 ##22 RAB8A (ENSMNEG00000044260) HSH2D (ENSMNEG00000035610) CIB3 (ENSMNEG00000045252) FAM32A (ENSMNEG00000031002) AP1M1 (ENSMNEG00000014458) KLF2 (ENSMNEG00000032490) EPS15L1 (ENSMNEG00000033557) CALR3 (ENSMNEG00000005210) C19orf44 (ENSMNEG00000042005) CHERP (ENSMNEG00000004125) SLC35E1 (ENSMNEG00000041471) MED26 (ENSMNEG00000043812) ENSMNEG00000007348 ENSMNEG00000042136 TMEM38A (ENSMNEG00000044076) Macaca_a ANCESTRAL SPECIES 1 ENSGT00940000162790.a ENSGT00940000153385.b.a.b.pc ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000154646.C.n.a ENSGT01060000248581.A.b.k ENSGT00940000164421.d ENSGT01100000263561.C.d.a.b.a ENSGT01100000263561.C.d.a.a ENSGT00940000164421.c ENSGT01060000248581.A.b.l ENSGT01030000234542.b.b.a.a.a.b.u ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000166143.A.a.b.b.b.b.b.b.a.a.a.b.b ENSGT01030000236338 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f Rhesus DUPLICATION Rhesus MODERN SPECIES 10 ENSMMUG00000017989 ENSMMUG00000053190 RASAL3 (ENSMMUG00000003030) PGLYRP2 (ENSMMUG00000003031) CYP4F22 (ENSMMUG00000016996) CYP4F8 (ENSMMUG00000010734) ENSMMUG00000028859 ENSMMUG00000064109 CYP4F11 (ENSMMUG00000039592) ENSMMUG00000062388 CYP4F2 (ENSMMUG00000043026) OR10H5 (ENSMMUG00000057314) OR10H1 (ENSMMUG00000052449) ENSMMUG00000038412 ENSMMUG00000056778 ENSMMUG00000015783 ##22 RAB8A (ENSMMUG00000056960) HSH2D (ENSMMUG00000057552) CIB3 (ENSMMUG00000004283) FAM32A (ENSMMUG00000013076) AP1M1 (ENSMMUG00000014026) ENSMMUG00000050577 KLF2 (ENSMMUG00000028855) EPS15L1 (ENSMMUG00000000994) CALR3 (ENSMMUG00000040142) C19H19orf44 (ENSMMUG00000028852) CHERP (ENSMMUG00000012958) SLC35E1 (ENSMMUG00000012959) MED26 (ENSMMUG00000042837) ENSMMUG00000062590 TMEM38A (ENSMMUG00000052014) Rhesus MODERN SPECIES 16 PDE4D (ENSMMUG00000012132) DEPDC1B (ENSMMUG00000018379) ENSMMUG00000053194 ENSMMUG00000062023 ELOVL7 (ENSMMUG00000014211) ENSMMUG00000010445 ERCC8 (ENSMMUG00000021812) ENSMMUG00000054780 NDUFAF2 (ENSMMUG00000021813) SMIM15 (ENSMMUG00000021815) ZSWIM6 (ENSMMUG00000002532) KIF2A (ENSMMUG00000000399) DIMT1 (ENSMMUG00000000400) IPO11 (ENSMMUG00000001233) ENSMMUG00000062969 ENSMMUG00000014009 ##22 HTR1A (ENSMMUG00000001789) RNF180 (ENSMMUG00000021130) RGS7BP (ENSMMUG00000021131) SHISAL2B (ENSMMUG00000063116) ENSMMUG00000054504 SREK1IP1 (ENSMMUG00000015040) CWC27 (ENSMMUG00000015041) ENSMMUG00000051169 ADAMTS6 (ENSMMUG00000018100) ENSMMUG00000050469 CENPK (ENSMMUG00000016509) PPWD1 (ENSMMUG00000016511) TRIM23 (ENSMMUG00000016514) SHLD3 (ENSMMUG00000053925) TRAPPC13 (ENSMMUG00000016519) Crab-eating macaque DUPLICATION Crab-eating macaque MODERN SPECIES 10 EPHX3 (ENSMFAG00000001020) ENSMFAG00000030806 AKAP8 (ENSMFAG00000042432) AKAP8L (ENSMFAG00000045237) ENSMFAG00000051652 WIZ (ENSMFAG00000039361) PGLYRP2 (ENSMFAG00000024296) CYP4F22 (ENSMFAG00000043198) ENSMFAG00000053879 ENSMFAG00000052137 CYP4F57 (ENSMFAG00000045394) ENSMFAG00000054713 OR10H5 (ENSMFAG00000054868) CYP4F11 (ENSMFAG00000039188) ENSMFAG00000018623 ENSMFAG00000042469 ##22 RAB8A (ENSMFAG00000035674) HSH2D (ENSMFAG00000039402) CIB3 (ENSMFAG00000034250) FAM32A (ENSMFAG00000002882) AP1M1 (ENSMFAG00000035693) ENSMFAG00000061358 ENSMFAG00000031244 EPS15L1 (ENSMFAG00000000444) C19orf44 (ENSMFAG00000035820) CHERP (ENSMFAG00000033267) SLC35E1 (ENSMFAG00000034490) ENSMFAG00000047757 SMIM7 (ENSMFAG00000045938) ENSMFAG00000051028 TMEM38A (ENSMFAG00000035712) Crab-eating macaque MODERN SPECIES 1 ENSMFAG00000058495 CACNG2 (ENSMFAG00000034357) ENSMFAG00000060131 ENSMFAG00000053996 EIF3D (ENSMFAG00000000481) FOXRED2 (ENSMFAG00000046365) TXN2 (ENSMFAG00000034407) MYH9 (ENSMFAG00000035156) ENSMFAG00000056753 ENSMFAG00000052009 APOL2 (ENSMFAG00000063310) APOL4 (ENSMFAG00000031976) RBFOX2 (ENSMFAG00000031994) ENSMFAG00000065532 ENSMFAG00000056277 ENSMFAG00000059252 ##22 APOL6 (ENSMFAG00000048917) MB (ENSMFAG00000042315) RASD2 (ENSMFAG00000048205) MCM5 (ENSMFAG00000037992) HMOX1 (ENSMFAG00000042891) TOM1 (ENSMFAG00000002824) HMGXB4 (ENSMFAG00000045206) ISX (ENSMFAG00000002513) LARGE1 (ENSMFAG00000043989) ENSMFAG00000055497 ENSMFAG00000054870 ENSMFAG00000056413 ENSMFAG00000047810 ENSMFAG00000054589 SYN3 (ENSMFAG00000032224) Rhinopithecus DUPLICATION Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES 873 ENSGT01100000264016 ENSGT01030000234542.b.b.a.a.a.b.v.a ##22 ENSGT00940000159814 Golden snub-nosed monkey MODERN SPECIES 2658 ENSRROG00000030346 ENSRROG00000029444 ##22 ZBTB7C (ENSRROG00000026684) Rhinopithecus ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.v.b ##22 Golden snub-nosed monkey MODERN SPECIES 1325 ENSRROG00000000891 ##22 Black snub-nosed monkey MODERN SPECIES 318 ENSRBIG00000032805 ENSRBIG00000034670 ##22 Rhinopithecus ANCESTRAL SPECIES ENSGT00940000158035 ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00900000143687 ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n.f ENSGT00940000155021.n.e ENSGT00940000154646.C.n.a ENSGT00940000154646.C.n.b ENSGT01030000234542.b.b.a.a.a.b.w ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b.e.a ENSGT00950000182915.b.b.b.b ENSGT00390000002505.e ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Golden snub-nosed monkey MODERN SPECIES 975 ILVBL (ENSRROG00000045749) NOTCH3 (ENSRROG00000044242) EPHX3 (ENSRROG00000044137) BRD4 (ENSRROG00000045546) AKAP8 (ENSRROG00000031442) AKAP8L (ENSRROG00000031937) ENSRROG00000007607 WIZ (ENSRROG00000035125) RASAL3 (ENSRROG00000030890) PGLYRP2 (ENSRROG00000042767) CYP4F22 (ENSRROG00000040745) ENSRROG00000042447 CYP4F8 (ENSRROG00000045470) ENSRROG00000007901 CYP4F2 (ENSRROG00000042855) ENSRROG00000036515 ##22 RAB8A (ENSRROG00000029919) HSH2D (ENSRROG00000026918) CIB3 (ENSRROG00000030426) FAM32A (ENSRROG00000034975) AP1M1 (ENSRROG00000024253) ENSRROG00000037623 EPS15L1 (ENSRROG00000045198) CALR3 (ENSRROG00000044958) ENSRROG00000045590 CHERP (ENSRROG00000040770) MED26 (ENSRROG00000030840) SMIM7 (ENSRROG00000037813) TMEM38A (ENSRROG00000038969) NWD1 (ENSRROG00000029874) SIN3B (ENSRROG00000040763) Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 1152 ENSRBIG00000033536 ENSRBIG00000038833 RASAL3 (ENSRBIG00000015805) PGLYRP2 (ENSRBIG00000000438) CYP4F22 (ENSRBIG00000033449) CYP4F12 (ENSRBIG00000036289) CYP4F11 (ENSRBIG00000037196) ENSRBIG00000027566 ENSRBIG00000043147 ##22 RAB8A (ENSRBIG00000039449) HSH2D (ENSRBIG00000003663) CIB3 (ENSRBIG00000042704) FAM32A (ENSRBIG00000022887) AP1M1 (ENSRBIG00000034604) ENSRBIG00000038085 ENSRBIG00000044993 ENSRBIG00000042513 CALR3 (ENSRBIG00000037904) ENSRBIG00000034125 CHERP (ENSRBIG00000038621) SLC35E1 (ENSRBIG00000042819) MED26 (ENSRBIG00000030783) SMIM7 (ENSRBIG00000029252) ENSRBIG00000033306 Black snub-nosed monkey MODERN SPECIES 2308 SMAD7 (ENSRBIG00000037910) CTIF (ENSRBIG00000043937) ENSRBIG00000044548 ENSRBIG00000024942 ENSRBIG00000035449 ##22 ZBTB7C (ENSRBIG00000028717) ZP4 (ENSRBIG00000042352) RYR2 (ENSRBIG00000027513) MTR (ENSRBIG00000034565) ACTN2 (ENSRBIG00000038349) ENSRBIG00000043115 HEATR1 (ENSRBIG00000039995) LGALS8 (ENSRBIG00000041075) EDARADD (ENSRBIG00000039820) ENSRBIG00000026836 ERO1B (ENSRBIG00000043925) GPR137B (ENSRBIG00000042655) NID1 (ENSRBIG00000028106) ENSRBIG00000004611 LYST (ENSRBIG00000014507) Hominoidea ANCESTRAL SPECIES ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000154646.C.m ENSGT01100000263561.C.d.b.a ENSGT01100000263561.C.d.a.b.b ENSGT01060000248581.A.b ENSGT01100000263561.C.d.a.b.a ENSGT01100000263561.C.d.a.a ENSGT00940000154646.C.n.b ENSGT00940000164421 ENSGT00940000163718.a.a ENSGT00940000154646.C.n.a ENSGT00940000155021.n ENSGT00940000163407 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Gibbon DUPLICATION Gibbon MODERN SPECIES NOTCH3 (ENSNLEG00000031319) EPHX3 (ENSNLEG00000005217) BRD4 (ENSNLEG00000005233) AKAP8 (ENSNLEG00000005263) AKAP8L (ENSNLEG00000005271) ENSNLEG00000005312 ENSNLEG00000005323 CYP4F22 (ENSNLEG00000005325) CYP4F8 (ENSNLEG00000005329) CYP4F3 (ENSNLEG00000026936) CYP4F12 (ENSNLEG00000031570) OR10H5 (ENSNLEG00000019211) OR10H1 (ENSNLEG00000019212) CYP4F2 (ENSNLEG00000030654) CYP4F11 (ENSNLEG00000005353) ENSNLEG00000005413 ##22 RAB8A (ENSNLEG00000030164) HSH2D (ENSNLEG00000005429) CIB3 (ENSNLEG00000005435) FAM32A (ENSNLEG00000005441) AP1M1 (ENSNLEG00000005449) ENSNLEG00000005469 EPS15L1 (ENSNLEG00000005471) CALR3 (ENSNLEG00000005502) C19orf44 (ENSNLEG00000005520) CHERP (ENSNLEG00000005536) ENSNLEG00000005563 MED26 (ENSNLEG00000005566) ENSNLEG00000035424 ENSNLEG00000005569 TMEM38A (ENSNLEG00000005579) Gibbon MODERN SPECIES 6 VCPIP1 (ENSNLEG00000010732) ENSNLEG00000029586 SGK3 (ENSNLEG00000010743) ENSNLEG00000031156 MCMDC2 (ENSNLEG00000010822) TCF24 (ENSNLEG00000010898) ENSNLEG00000010902 COPS5 (ENSNLEG00000010914) CSPP1 (ENSNLEG00000010957) ARFGEF1 (ENSNLEG00000010984) ENSNLEG00000036279 ENSNLEG00000029057 CPA6 (ENSNLEG00000011082) PREX2 (ENSNLEG00000011108) ENSNLEG00000011239 ENSNLEG00000034014 ##22 SULF1 (ENSNLEG00000011274) SLCO5A1 (ENSNLEG00000011288) ENSNLEG00000034524 PRDM14 (ENSNLEG00000011310) ENSNLEG00000006505 ENSNLEG00000030479 NCOA2 (ENSNLEG00000011320) ENSNLEG00000035973 TRAM1 (ENSNLEG00000011376) LACTB2 (ENSNLEG00000011398) XKR9 (ENSNLEG00000011411) ENSNLEG00000027272 EYA1 (ENSNLEG00000011419) ENSNLEG00000011452 TRPA1 (ENSNLEG00000011456) Hominidae ANCESTRAL SPECIES ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C.n.a ENSGT00940000163718.a.a ENSGT00940000154646.C.m ENSGT01100000263561.C.d.b.a ENSGT01100000263561.C.d.a.b.b ENSGT01100000263561.C.d.a.b.a ENSGT01100000263561.C.d.a.a ENSGT00940000154646.C.n.b ENSGT00940000164421 ENSGT01060000248581.A.b ENSGT00940000163407 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C.n.a ENSGT00940000163718.a.a ENSGT01100000263561.C.d.a.b.b ENSGT01060000248581.A.b.i ENSGT01100000263561.C.d.a.b.a ENSGT01100000263561.C.d.a.a ENSGT00940000154646.C.n.b ENSGT00940000155309.e.b ENSGT00940000164421 ENSGT01060000248581.A.b.j ENSGT00940000163407 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Homo/Pan group ANCESTRAL SPECIES ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000163407 ENSGT00940000163718.a.a ENSGT01100000263561.C.d.a.b.b ENSGT01060000248581.A.b.i ENSGT01100000263561.C.d.a.b.a ENSGT01100000263561.C.d.a.a ENSGT00940000154646.C.n.b ENSGT00940000155309.e.b ENSGT00940000164421 ENSGT01060000248581.A.b.j ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Human MODERN SPECIES 10 AKAP8L (ENSG00000011243) WIZ (ENSG00000011451) RASAL3 (ENSG00000105122) PGLYRP2 (ENSG00000161031) CYP4F22 (ENSG00000171954) CYP4F8 (ENSG00000186526) CYP4F3 (ENSG00000186529) CYP4F12 (ENSG00000186204) OR10H2 (ENSG00000171942) OR10H3 (ENSG00000171936) OR10H5 (ENSG00000172519) OR10H1 (ENSG00000186723) CYP4F2 (ENSG00000186115) CYP4F11 (ENSG00000171903) OR10H4 (ENSG00000176231) TPM4 (ENSG00000167460) ##22 RAB8A (ENSG00000167461) HSH2D (ENSG00000196684) CIB3 (ENSG00000141977) FAM32A (ENSG00000105058) AP1M1 (ENSG00000072958) KLF2 (ENSG00000127528) EPS15L1 (ENSG00000127527) CALR3 (ENSG00000269058) C19orf44 (ENSG00000105072) CHERP (ENSG00000085872) SLC35E1 (ENSG00000127526) MED26 (ENSG00000105085) ENSG00000268790 SMIM7 (ENSG00000214046) TMEM38A (ENSG00000072954) Pan DUPLICATION Pan DUPLICATION Pan ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.z.a ##22 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 513 ENSPTRG00000046887 ##22 Chimpanzee MODERN SPECIES 16 NR1D2 (ENSPTRG00000014696) ENSPTRG00000050678 THRB (ENSPTRG00000014697) RARB (ENSPTRG00000014698) ENSPTRG00000052750 TOP2B (ENSPTRG00000014699) ENSPTRG00000043412 NGLY1 (ENSPTRG00000014700) ENSPTRG00000047793 OXSM (ENSPTRG00000014701) LRRC3B (ENSPTRG00000014702) NEK10 (ENSPTRG00000014703) ENSPTRG00000048639 SLC4A7 (ENSPTRG00000014704) ENSPTRG00000039223 ENSPTRG00000044197 ##22 ENSPTRG00000047583 EOMES (ENSPTRG00000014705) CMC1 (ENSPTRG00000014706) AZI2 (ENSPTRG00000014707) ZCWPW2 (ENSPTRG00000030289) ENSPTRG00000048417 RBMS3 (ENSPTRG00000014709) TGFBR2 (ENSPTRG00000014711) GADL1 (ENSPTRG00000014712) ENSPTRG00000051512 STT3B (ENSPTRG00000014713) OSBPL10 (ENSPTRG00000014714) ZNF860 (ENSPTRG00000011428) GPD1L (ENSPTRG00000043993) CMTM8 (ENSPTRG00000014717) Pan ANCESTRAL SPECIES 11 ENSGT00940000157709 ENSGT00390000002854 ENSGT00940000163244.d.b.a.b.b.a.b ENSGT00390000009693.m.a ENSGT00940000153776.a.a ENSGT01090000260080.b.b ENSGT00940000162447 ENSGT00940000158260 ENSGT00910000146934 ENSGT00550000074850.l ENSGT00390000015084.d ENSGT00940000157108 ENSGT00940000159307 ENSGT00940000155894 ENSGT00390000005870 ENSGT01030000234542.b.b.a.a.a.b.z.b ##22 ENSGT00940000157544 ENSGT01080000257410.B.a ENSGT00940000158936.h ENSGT00940000154502.g.b.b ENSGT00940000159454 ENSGT00900000140979.a.a.`b.a.p ENSGT00950000183021.a.a.b ENSGT00910000147476 ENSGT00510000046470.a.a.a.d.a ENSGT00390000001710 ENSGT01090000260093.a ENSGT00950000182978.A.a.b.a ENSGT00940000160438 ENSGT00940000156118 ENSGT00940000161902.a.a Bonobo MODERN SPECIES 21 VCPIP1 (ENSPPAG00000028693) ENSPPAG00000041765 ENSPPAG00000039360 SGK3 (ENSPPAG00000037172) ENSPPAG00000033423 ENSPPAG00000034583 ENSPPAG00000036430 ENSPPAG00000043769 ENSPPAG00000033505 COPS5 (ENSPPAG00000031468) CSPP1 (ENSPPAG00000034833) ARFGEF1 (ENSPPAG00000041346) CPA6 (ENSPPAG00000040368) PREX2 (ENSPPAG00000033752) C8orf34 (ENSPPAG00000035210) ENSPPAG00000031242 ##22 SULF1 (ENSPPAG00000041354) ENSPPAG00000041983 SLCO5A1 (ENSPPAG00000011123) ENSPPAG00000029133 ENSPPAG00000032396 PRDM14 (ENSPPAG00000027098) ENSPPAG00000030392 NCOA2 (ENSPPAG00000031424) ENSPPAG00000030682 TRAM1 (ENSPPAG00000012607) LACTB2 (ENSPPAG00000013911) XKR9 (ENSPPAG00000035635) EYA1 (ENSPPAG00000020921) ENSPPAG00000041227 ENSPPAG00000035955 Chimpanzee MODERN SPECIES 21 VCPIP1 (ENSPTRG00000020309) C8H8orf44 (ENSPTRG00000020310) ENSPTRG00000052460 SGK3 (ENSPTRG00000020312) MCMDC2 (ENSPTRG00000020313) TCF24 (ENSPTRG00000043956) PPP1R42 (ENSPTRG00000020316) ENSPTRG00000047819 ENSPTRG00000045983 COPS5 (ENSPTRG00000020317) CSPP1 (ENSPTRG00000020319) ARFGEF1 (ENSPTRG00000020320) CPA6 (ENSPTRG00000020322) PREX2 (ENSPTRG00000020324) C8H8orf34 (ENSPTRG00000020325) ENSPTRG00000052468 ##22 SULF1 (ENSPTRG00000020328) SLCO5A1 (ENSPTRG00000020330) ENSPTRG00000046835 ENSPTRG00000050493 PRDM14 (ENSPTRG00000020331) ENSPTRG00000040239 NCOA2 (ENSPTRG00000020333) ENSPTRG00000044484 TRAM1 (ENSPTRG00000020334) LACTB2 (ENSPTRG00000020336) XKR9 (ENSPTRG00000030985) EYA1 (ENSPTRG00000020337) MSC (ENSPTRG00000020339) TRPA1 (ENSPTRG00000020340) KCNB2 (ENSPTRG00000020341) Pan ANCESTRAL SPECIES 14 ENSGT00900000143687 ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00390000009210.j ENSGT00940000163407 ENSGT00940000163718.a.a ENSGT01060000248581.A.b.i ENSGT00940000163718.a.b ENSGT00940000154646.C.n.b ENSGT00940000155309.e.b ENSGT00940000164421 ENSGT01060000248581.A.b.j ENSGT01030000234542.b.b.a.a.a.b.`b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Chimpanzee MODERN SPECIES 10 ENSPTRG00000010622 RASAL3 (ENSPTRG00000033776) PGLYRP2 (ENSPTRG00000010624) CYP4F22 (ENSPTRG00000010625) ENSPTRG00000051034 CYP4F8 (ENSPTRG00000010627) ENSPTRG00000022977 CYP4F3 (ENSPTRG00000010628) CYP4F12 (ENSPTRG00000010629) OR10H3 (ENSPTRG00000044446) ENSPTRG00000042532 CYP4F2 (ENSPTRG00000010632) ENSPTRG00000045648 CYP4F11 (ENSPTRG00000010634) OR10H4 (ENSPTRG00000047781) TPM4 (ENSPTRG00000010637) ##22 RAB8A (ENSPTRG00000010639) HSH2D (ENSPTRG00000023880) CIB3 (ENSPTRG00000010640) FAM32A (ENSPTRG00000010641) AP1M1 (ENSPTRG00000010642) KLF2 (ENSPTRG00000010643) EPS15L1 (ENSPTRG00000010644) CALR3 (ENSPTRG00000010645) C19H19orf44 (ENSPTRG00000010646) CHERP (ENSPTRG00000010647) SLC35E1 (ENSPTRG00000010648) MED26 (ENSPTRG00000010649) SMIM7 (ENSPTRG00000010650) TMEM38A (ENSPTRG00000010651) NWD1 (ENSPTRG00000010653) Bonobo MODERN SPECIES 10 ENSPPAG00000024543 ENSPPAG00000041420 RASAL3 (ENSPPAG00000041913) PGLYRP2 (ENSPPAG00000034272) CYP4F22 (ENSPPAG00000040206) CYP4F8 (ENSPPAG00000028268) ENSPPAG00000035382 CYP4F3 (ENSPPAG00000037690) CYP4F12 (ENSPPAG00000028411) OR10H3 (ENSPPAG00000002838) ENSPPAG00000043725 CYP4F2 (ENSPPAG00000025911) ENSPPAG00000028618 CYP4F11 (ENSPPAG00000014907) OR10H4 (ENSPPAG00000002961) ENSPPAG00000040171 ##22 RAB8A (ENSPPAG00000040543) HSH2D (ENSPPAG00000031940) CIB3 (ENSPPAG00000041194) FAM32A (ENSPPAG00000025422) AP1M1 (ENSPPAG00000041870) ENSPPAG00000028173 EPS15L1 (ENSPPAG00000043633) CALR3 (ENSPPAG00000039726) C19orf44 (ENSPPAG00000029222) CHERP (ENSPPAG00000029195) SLC35E1 (ENSPPAG00000026424) MED26 (ENSPPAG00000033523) ENSPPAG00000037541 TMEM38A (ENSPPAG00000005460) NWD1 (ENSPPAG00000032301) Gorilla DUPLICATION Gorilla MODERN SPECIES 10 AKAP8 (ENSGGOG00000013427) AKAP8L (ENSGGOG00000013441) ENSGGOG00000013470 RASAL3 (ENSGGOG00000000560) PGLYRP2 (ENSGGOG00000000564) CYP4F22 (ENSGGOG00000010994) ENSGGOG00000013315 ENSGGOG00000003217 ENSGGOG00000013325 OR10H1 (ENSGGOG00000015718) CYP4F2 (ENSGGOG00000041863) ENSGGOG00000041121 CYP4F11 (ENSGGOG00000003211) OR10H4 (ENSGGOG00000037361) ENSGGOG00000040592 ENSGGOG00000014510 ##22 RAB8A (ENSGGOG00000015236) HSH2D (ENSGGOG00000000044) CIB3 (ENSGGOG00000004340) FAM32A (ENSGGOG00000022418) AP1M1 (ENSGGOG00000004343) EPS15L1 (ENSGGOG00000013623) CALR3 (ENSGGOG00000022144) C19orf44 (ENSGGOG00000016339) CHERP (ENSGGOG00000016348) SLC35E1 (ENSGGOG00000016361) MED26 (ENSGGOG00000016370) ENSGGOG00000040518 TMEM38A (ENSGGOG00000008175) NWD1 (ENSGGOG00000016341) SIN3B (ENSGGOG00000009520) Gorilla MODERN SPECIES 98 ENSGGOG00000028454 ##22 Orangutan DUPLICATION Orangutan MODERN SPECIES 10 AKAP8L (ENSPPYG00000029684) WIZ (ENSPPYG00000009672) RASAL3 (ENSPPYG00000029373) PGLYRP2 (ENSPPYG00000009673) CYP4F22 (ENSPPYG00000039746) CYP4F8 (ENSPPYG00000009678) ENSPPYG00000035762 CYP4F12 (ENSPPYG00000009674) ENSPPYG00000040062 ENSPPYG00000039864 OR10H2 (ENSPPYG00000009676) CYP4F2 (ENSPPYG00000031401) CYP4F11 (ENSPPYG00000033228) ENSPPYG00000035877 ENSPPYG00000030338 ENSPPYG00000009681 ##22 RAB8A (ENSPPYG00000009682) HSH2D (ENSPPYG00000009683) CIB3 (ENSPPYG00000009684) FAM32A (ENSPPYG00000036075) AP1M1 (ENSPPYG00000009686) KLF2 (ENSPPYG00000009687) EPS15L1 (ENSPPYG00000009688) CALR3 (ENSPPYG00000009689) C19orf44 (ENSPPYG00000009690) CHERP (ENSPPYG00000009691) SLC35E1 (ENSPPYG00000009692) MED26 (ENSPPYG00000040195) ENSPPYG00000009694 TMEM38A (ENSPPYG00000009695) NWD1 (ENSPPYG00000009696) Orangutan MODERN SPECIES 21 ADHFE1 (ENSPPYG00000018638) VXN (ENSPPYG00000018639) MYBL1 (ENSPPYG00000018640) VCPIP1 (ENSPPYG00000018641) ENSPPYG00000018642 SGK3 (ENSPPYG00000018644) MCMDC2 (ENSPPYG00000018645) TCF24 (ENSPPYG00000032491) ENSPPYG00000018647 COPS5 (ENSPPYG00000018648) CSPP1 (ENSPPYG00000018649) ARFGEF1 (ENSPPYG00000018650) CPA6 (ENSPPYG00000018651) PREX2 (ENSPPYG00000018652) C8H8orf34 (ENSPPYG00000018653) ENSPPYG00000040136 ##22 SULF1 (ENSPPYG00000018654) ENSPPYG00000040497 SLCO5A1 (ENSPPYG00000018656) PRDM14 (ENSPPYG00000018658) ENSPPYG00000030115 NCOA2 (ENSPPYG00000029582) TRAM1 (ENSPPYG00000018660) XKR9 (ENSPPYG00000018663) LACTB2 (ENSPPYG00000018662) EYA1 (ENSPPYG00000018664) MSC (ENSPPYG00000018665) TRPA1 (ENSPPYG00000018666) KCNB2 (ENSPPYG00000018667) TERF1 (ENSPPYG00000018669) SBSPON (ENSPPYG00000018670) Tarsier DUPLICATION Tarsier MODERN SPECIES 1599 TPM4 (ENSTSYG00000010642) ##22 RAB8A (ENSTSYG00000037449) ENSTSYG00000034871 FAM32A (ENSTSYG00000034807) AP1M1 (ENSTSYG00000031508) Tarsier MODERN SPECIES 4069 ENSTSYG00000025727 ENSTSYG00000031742 NUP37 (ENSTSYG00000009387) WASHC3 (ENSTSYG00000000587) DRAM1 (ENSTSYG00000002454) GNPTAB (ENSTSYG00000007204) ENSTSYG00000027359 ##22 SYCP3 (ENSTSYG00000002324) CHPT1 (ENSTSYG00000002317) Laurasiatheria ANCESTRAL SPECIES 15 ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000163407 ENSGT00940000164421 ENSGT00940000154646.C ENSGT01060000248581.A.b ENSGT00940000165043 ENSGT01100000263561.C.d.b.a ENSGT01100000263561.C.d.a ENSGT00940000162906.c.a.f ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000177900 Laurasiatheria_a ANCESTRAL SPECIES 19 ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000164421 ENSGT00940000154646.C ENSGT00940000155021.n ENSGT00940000163407 ENSGT01060000248581.A.b ENSGT01100000263561.C.d.b.a ENSGT01100000263561.C.d.a ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000177900 Laurasiatheria_b ANCESTRAL SPECIES 18 ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000163407 ENSGT00940000164421 ENSGT00940000154646.C ENSGT00940000154227.b ENSGT01100000263561.C.d.b.a ENSGT01060000248581.A.b ENSGT01100000263561.C.d.a ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.b ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Carnivora ANCESTRAL SPECIES 6 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000163407 ENSGT00940000154646.C ENSGT00940000162906.c.a.f ENSGT00940000164421 ENSGT00940000154227.b ENSGT01100000263561.C.d.b.a ENSGT01060000248581.A.b ENSGT01100000263561.C.d.a ENSGT00940000162906.c.a.e ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.b ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Felidae ANCESTRAL SPECIES 17 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000163407 ENSGT00940000154646.C ENSGT00940000162906.c.a.f ENSGT01100000263561.C.d.a.p ENSGT00940000164421 ENSGT01100000263561.C.d.b.a ENSGT01100000263561.C.d.a.o.a ENSGT01060000248581.A.b.c ENSGT01060000248581.A.b.d ENSGT01100000263561.C.d.a.o.b ENSGT00940000162906.c.a.e ENSGT01090000260018.B.a.a ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.b ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Cat MODERN SPECIES 1 BRD4 (ENSFCAG00000000916) AKAP8 (ENSFCAG00000013646) AKAP8L (ENSFCAG00000034698) WIZ (ENSFCAG00000013648) RASAL3 (ENSFCAG00000018305) PGLYRP2 (ENSFCAG00000013649) CYP4F22 (ENSFCAG00000028754) CYP4F140 (ENSFCAG00000008623) ENSFCAG00000048595 ENSFCAG00000044421 OR10H4 (ENSFCAG00000036085) ENSFCAG00000052294 OR10H1 (ENSFCAG00000041665) ENSFCAG00000047898 ENSFCAG00000052059 TPM4 (ENSFCAG00000008999) ##22 RAB8A (ENSFCAG00000036032) HSH2D (ENSFCAG00000009001) CIB3 (ENSFCAG00000009003) FAM32A (ENSFCAG00000028032) AP1M1 (ENSFCAG00000009006) KLF2 (ENSFCAG00000043468) EPS15L1 (ENSFCAG00000013169) CALR3 (ENSFCAG00000036928) CA2H19orf44 (ENSFCAG00000013171) ENSFCAG00000053594 CHERP (ENSFCAG00000013172) SLC35E1 (ENSFCAG00000013173) MED26 (ENSFCAG00000022360) SMIM7 (ENSFCAG00000016411) TMEM38A (ENSFCAG00000024691) Panthera ANCESTRAL SPECIES 1 ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000163407 ENSGT01100000263561.C.d.a.o.a ENSGT01060000248581.A.b.c.b ENSGT00940000154227.b ENSGT01060000248581.A.b.c.a.a ENSGT01060000248581.A.b.c.a.b ENSGT01100000263561.C.d.b.a ENSGT01060000248581.A.b.d ENSGT01100000263561.C.d.a.o.b ENSGT00940000162906.c.a.e ENSGT01090000260018.B.a.a ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.b ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Tiger MODERN SPECIES 281 ENSPTIG00000012019 ENSPTIG00000012570 RASAL3 (ENSPTIG00000012857) CYP4F22 (ENSPTIG00000014642) CYP4F140 (ENSPTIG00000014950) ENSPTIG00000015129 ENSPTIG00000015652 ENSPTIG00000006049 ENSPTIG00000006054 ENSPTIG00000006059 ENSPTIG00000006072 ENSPTIG00000006081 ENSPTIG00000006091 ENSPTIG00000006095 ENSPTIG00000006099 TPM4 (ENSPTIG00000016262) ##22 RAB8A (ENSPTIG00000016421) HSH2D (ENSPTIG00000017002) CIB3 (ENSPTIG00000017300) FAM32A (ENSPTIG00000017409) AP1M1 (ENSPTIG00000017707) EPS15L1 (ENSPTIG00000017918) CALR3 (ENSPTIG00000018962) C19orf44 (ENSPTIG00000019459) CHERP (ENSPTIG00000019778) SLC35E1 (ENSPTIG00000000750) ENSPTIG00000001320 SMIM7 (ENSPTIG00000001930) TMEM38A (ENSPTIG00000004264) NWD1 (ENSPTIG00000005272) ENSPTIG00000006764 Panthera_a ANCESTRAL SPECIES ENSGT00940000158718.g ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT00940000162906.c.a.f ENSGT01100000263561.C.d.a.p ENSGT01100000263561.C.d.a.o.a ENSGT01060000248581.A.b.c.b ENSGT00940000154227.b.i ENSGT01060000248581.A.b.c.a.a ENSGT01060000248581.A.b.c.a.b ENSGT01060000248581.A.b.d ENSGT01100000263561.C.d.a.o.b ENSGT00940000162906.c.a.e ENSGT01090000260018.B.a.a ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.b ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 leopard MODERN SPECIES 68 CYP4F22 (ENSPPRG00000002745) ENSPPRG00000002620 ENSPPRG00000002280 CYP4F3 (ENSPPRG00000001769) ENSPPRG00000000160 ENSPPRG00000020913 ENSPPRG00000022821 ENSPPRG00000020898 ENSPPRG00000020886 ENSPPRG00000020871 ENSPPRG00000020849 ENSPPRG00000020838 ENSPPRG00000020828 ENSPPRG00000020810 ENSPPRG00000020796 TPM4 (ENSPPRG00000020667) ##22 RAB8A (ENSPPRG00000018809) HSH2D (ENSPPRG00000016653) CIB3 (ENSPPRG00000014160) FAM32A (ENSPPRG00000013338) AP1M1 (ENSPPRG00000011710) KLF2 (ENSPPRG00000010172) EPS15L1 (ENSPPRG00000009628) CALR3 (ENSPPRG00000003981) C19orf44 (ENSPPRG00000003542) CHERP (ENSPPRG00000003275) SLC35E1 (ENSPPRG00000002839) MED26 (ENSPPRG00000002137) SMIM7 (ENSPPRG00000001938) TMEM38A (ENSPPRG00000001060) NWD1 (ENSPPRG00000000158) lion MODERN SPECIES 2 AKAP8 (ENSPLOG00000000489) AKAP8L (ENSPLOG00000000459) WIZ (ENSPLOG00000000541) RASAL3 (ENSPLOG00000000606) PGLYRP2 (ENSPLOG00000000711) CYP4F22 (ENSPLOG00000000828) ENSPLOG00000000847 ENSPLOG00000000866 ENSPLOG00000000908 ENSPLOG00000000957 ENSPLOG00000000975 ENSPLOG00000000987 ENSPLOG00000001003 ENSPLOG00000001019 ENSPLOG00000001031 TPM4 (ENSPLOG00000001050) ##22 RAB8A (ENSPLOG00000001068) ENSPLOG00000001104 CIB3 (ENSPLOG00000001130) FAM32A (ENSPLOG00000001164) AP1M1 (ENSPLOG00000001262) KLF2 (ENSPLOG00000001379) EPS15L1 (ENSPLOG00000001425) CALR3 (ENSPLOG00000001499) C19orf44 (ENSPLOG00000001520) CHERP (ENSPLOG00000001572) SLC35E1 (ENSPLOG00000001639) MED26 (ENSPLOG00000001683) ENSPLOG00000001708 TMEM38A (ENSPLOG00000001735) NWD1 (ENSPLOG00000001788) Caniformia ANCESTRAL SPECIES 4 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT00940000162906.c.a.f ENSGT01100000263561.C.d.a.q ENSGT01100000263561.C.d.a.r.a ENSGT01100000263561.C.d.b.a.i.b ENSGT00940000154227.b ENSGT01100000263561.C.d.b.a.j ENSGT01060000248581.A.b ENSGT01100000263561.C.d.a.r.b ENSGT00940000162906.c.a.e ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.b ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Canidae ANCESTRAL SPECIES ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT00940000162906.c.a.f ENSGT01100000263561.C.d.a.q ENSGT01100000263561.C.d.a.r.a ENSGT00940000154227.b.g ENSGT01100000263561.C.d.b.a.i.a ENSGT00940000154227.b.h.a ENSGT01100000263561.C.d.a.r.b ENSGT00940000162906.c.a.e ENSGT01090000260018.B.a.a ENSGT00940000162704.f.b ENSGT00940000162704.f.a ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.b.c.b ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Canis_lupus ANCESTRAL SPECIES 1 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000163407 ENSGT00940000154646.C ENSGT00940000162906.c.a.f ENSGT01100000263561.C.d.a.q ENSGT01100000263561.C.d.a.r.a ENSGT00940000154227.b.g ENSGT01100000263561.C.d.b.a.i.a ENSGT00940000154227.b.h.a ENSGT01100000263561.C.d.a.r.b ENSGT00940000162906.c.a.e ENSGT01090000260018.B.a.a ENSGT00940000162704.f.b ENSGT00940000162704.f.a ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.b.c.b ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Dingo MODERN SPECIES 112 ENSCAFG00020009611 ENSCAFG00020009613 ENSCAFG00020009621 ENSCAFG00020009625 ENSCAFG00020009635 ENSCAFG00020009639 ENSCAFG00020009643 ENSCAFG00020009647 ENSCAFG00020009651 ENSCAFG00020009654 ENSCAFG00020009657 ENSCAFG00020009663 ENSCAFG00020009676 ENSCAFG00020009681 ENSCAFG00020009682 TPM4 (ENSCAFG00020009686) ##22 RAB8A (ENSCAFG00020009705) HSH2D (ENSCAFG00020009709) CIB3 (ENSCAFG00020009714) ENSCAFG00020009726 AP1M1 (ENSCAFG00020009738) KLF2 (ENSCAFG00020009744) EPS15L1 (ENSCAFG00020009751) ENSCAFG00020009859 ENSCAFG00020009884 C19orf44 (ENSCAFG00020009908) CHERP (ENSCAFG00020009941) ENSCAFG00020010269 MED26 (ENSCAFG00020010270) ENSCAFG00020010274 TMEM38A (ENSCAFG00020010277) Red fox DUPLICATION Red fox MODERN SPECIES 5 CYP4F8 (ENSVVUG00000020339) CYP4F2 (ENSVVUG00000020330) ENSVVUG00000020329 ENSVVUG00000020325 ENSVVUG00000020324 ENSVVUG00000020323 ENSVVUG00000020322 ENSVVUG00000020321 ENSVVUG00000020319 ENSVVUG00000020317 ENSVVUG00000020316 ENSVVUG00000020313 LINC01835 (ENSVVUG00000020310) ENSVVUG00000020307 ENSVVUG00000020305 TPM4 (ENSVVUG00000017345) ##22 RAB8A (ENSVVUG00000017193) ENSVVUG00000017179 CIB3 (ENSVVUG00000017174) FAM32A (ENSVVUG00000017167) AP1M1 (ENSVVUG00000017156) ENSVVUG00000017150 ENSVVUG00000017148 EPS15L1 (ENSVVUG00000017079) CALR3 (ENSVVUG00000016815) CUNH19orf44 (ENSVVUG00000016796) CHERP (ENSVVUG00000016546) SLC35E1 (ENSVVUG00000016525) MED26 (ENSVVUG00000016506) TMEM38A (ENSVVUG00000016501) NWD1 (ENSVVUG00000016498) Red fox MODERN SPECIES 31 MAP3K3 (ENSVVUG00000005830) LIMD2 (ENSVVUG00000005838) STRADA (ENSVVUG00000005844) CCDC47 (ENSVVUG00000005858) DDX42 (ENSVVUG00000006095) FTSJ3 (ENSVVUG00000006106) PSMC5 (ENSVVUG00000006117) ENSVVUG00000006131 ENSVVUG00000006142 ENSVVUG00000006149 CD79B (ENSVVUG00000006154) SCN4A (ENSVVUG00000006165) PRR29 (ENSVVUG00000006201) ENSVVUG00000006208 ERN1 (ENSVVUG00000006214) ENSVVUG00000006227 ##22 TEX2 (ENSVVUG00000006237) PECAM1 (ENSVVUG00000006243) ENSVVUG00000006251 POLG2 (ENSVVUG00000006258) DDX5 (ENSVVUG00000006263) CEP95 (ENSVVUG00000006275) SMURF2 (ENSVVUG00000006289) ENSVVUG00000006306 ENSVVUG00000006316 CUNH17orf58 (ENSVVUG00000006320) BPTF (ENSVVUG00000006352) ENSVVUG00000006465 NOL11 (ENSVVUG00000006471) PITPNC1 (ENSVVUG00000006484) PSMD12 (ENSVVUG00000006512) Caniformia_b ANCESTRAL SPECIES 16 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000163407 ENSGT00940000154646.C ENSGT00940000162906.c.a.f ENSGT01100000263561.C.d.a.q ENSGT01100000263561.C.d.a.r.a ENSGT01100000263561.C.d.b.a.i.b ENSGT00940000154227.b ENSGT01100000263561.C.d.b.a.j ENSGT01060000248581.A.b ENSGT01100000263561.C.d.a.r.b ENSGT00940000162906.c.a.e ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.b ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Mustelinae ANCESTRAL SPECIES 10 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000162906.c.a.f ENSGT01100000263561.C.d.a.q ENSGT01100000263561.C.d.a.r.a ENSGT01100000263561.C.d.b.a.i.b ENSGT01060000248581.A.b ENSGT01100000263561.C.d.b.a.i.a ENSGT01100000263561.C.d.a.r.b.b ENSGT01100000263561.C.d.a.r.b.a.a ENSGT01100000263561.C.d.a.r.b.a.b ENSGT00940000162906.c.a.e ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.b ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Ferret MODERN SPECIES 238 PGLYRP2 (ENSMPUG00000016064) CYP4F22 (ENSMPUG00000016061) CYP4F8 (ENSMPUG00000016059) ENSMPUG00000016058 ENSMPUG00000019678 ENSMPUG00000019677 ENSMPUG00000019676 ENSMPUG00000019675 ENSMPUG00000019674 ENSMPUG00000019673 ENSMPUG00000019672 ENSMPUG00000016056 ENSMPUG00000019671 ENSMPUG00000019670 ENSMPUG00000019668 TPM4 (ENSMPUG00000016054) ##22 RAB8A (ENSMPUG00000016053) HSH2D (ENSMPUG00000016050) CIB3 (ENSMPUG00000016049) FAM32A (ENSMPUG00000016048) AP1M1 (ENSMPUG00000016047) EPS15L1 (ENSMPUG00000016046) CALR3 (ENSMPUG00000016034) C19orf44 (ENSMPUG00000016031) CHERP (ENSMPUG00000016023) SLC35E1 (ENSMPUG00000016022) MED26 (ENSMPUG00000016021) TMEM38A (ENSMPUG00000016018) NWD1 (ENSMPUG00000016016) SIN3B (ENSMPUG00000016012) F2RL3 (ENSMPUG00000016009) American mink DUPLICATION American mink DUPLICATION American mink MODERN SPECIES 58 ENSNVIG00000011824 ENSNVIG00000011832 PGLYRP2 (ENSNVIG00000011872) CYP4F22 (ENSNVIG00000011878) CYP4F8 (ENSNVIG00000011913) ENSNVIG00000011997 ENSNVIG00000012029 ENSNVIG00000012034 ENSNVIG00000012037 ENSNVIG00000012057 ENSNVIG00000012064 ENSNVIG00000012069 ENSNVIG00000012086 ENSNVIG00000012093 ENSNVIG00000012099 ENSNVIG00000012105 ##22 ENSNVIG00000012120 ##22 RAB8A (ENSNVIG00000012128) HSH2D (ENSNVIG00000012157) CIB3 (ENSNVIG00000012192) FAM32A (ENSNVIG00000012240) AP1M1 (ENSNVIG00000012262) KLF2 (ENSNVIG00000012328) EPS15L1 (ENSNVIG00000012435) CALR3 (ENSNVIG00000015169) C19orf44 (ENSNVIG00000015206) CHERP (ENSNVIG00000015269) SLC35E1 (ENSNVIG00000015315) MED26 (ENSNVIG00000015329) SMIM7 (ENSNVIG00000015340) TMEM38A (ENSNVIG00000015373) American mink MODERN SPECIES 58 ENSNVIG00000011832 PGLYRP2 (ENSNVIG00000011872) CYP4F22 (ENSNVIG00000011878) CYP4F8 (ENSNVIG00000011913) ENSNVIG00000011997 ENSNVIG00000012029 ENSNVIG00000012034 ENSNVIG00000012037 ENSNVIG00000012057 ENSNVIG00000012064 ENSNVIG00000012069 ENSNVIG00000012086 ENSNVIG00000012093 ENSNVIG00000012099 ENSNVIG00000012105 ##22 ENSNVIG00000012120 ##22 RAB8A (ENSNVIG00000012128) HSH2D (ENSNVIG00000012157) CIB3 (ENSNVIG00000012192) FAM32A (ENSNVIG00000012240) AP1M1 (ENSNVIG00000012262) KLF2 (ENSNVIG00000012328) EPS15L1 (ENSNVIG00000012435) CALR3 (ENSNVIG00000015169) C19orf44 (ENSNVIG00000015206) CHERP (ENSNVIG00000015269) SLC35E1 (ENSNVIG00000015315) MED26 (ENSNVIG00000015329) SMIM7 (ENSNVIG00000015340) TMEM38A (ENSNVIG00000015373) ENSNVIG00000015386 American mink MODERN SPECIES 536 ENSNVIG00000005050 ##22 NIPA1 (ENSNVIG00000004993) HERC2 (ENSNVIG00000004858) ENSNVIG00000004844 Ursidae ANCESTRAL SPECIES 11 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000163407 ENSGT00940000154646.C ENSGT00940000162906.c.a.f ENSGT01100000263561.C.d.a.q ENSGT01100000263561.C.d.a.r.a ENSGT00940000154227.b ENSGT01090000260018.B.a.a ENSGT01100000263561.C.d.a.r.b ENSGT01100000263561.C.d.b.a.j ENSGT01060000248581.A.b ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.b ENSGT00940000157924 ENSGT00940000163163 ENSGT01030000236338 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00940000171473 ENSGT00390000014626 Giant Panda MODERN SPECIES 14 AKAP8 (ENSAMEG00000002281) ENSAMEG00000002239 RASAL3 (ENSAMEG00000002217) PGLYRP2 (ENSAMEG00000024564) ENSAMEG00000002157 ENSAMEG00000013908 ENSAMEG00000025157 ENSAMEG00000018734 ENSAMEG00000019504 ENSAMEG00000029539 ENSAMEG00000026922 ENSAMEG00000023541 ENSAMEG00000029590 ENSAMEG00000023729 ENSAMEG00000023790 ENSAMEG00000009836 ##22 HSH2D (ENSAMEG00000009875) CIB3 (ENSAMEG00000009877) FAM32A (ENSAMEG00000030487) AP1M1 (ENSAMEG00000009898) ENSAMEG00000009942 EPS15L1 (ENSAMEG00000009945) CALR3 (ENSAMEG00000009994) C19orf44 (ENSAMEG00000010044) CHERP (ENSAMEG00000010048) SLC35E1 (ENSAMEG00000010089) MED26 (ENSAMEG00000028493) ENSAMEG00000028498 TMEM38A (ENSAMEG00000026882) NWD1 (ENSAMEG00000010118) SIN3B (ENSAMEG00000010148) Ursus ANCESTRAL SPECIES 236 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.b ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 Polar bear MODERN SPECIES 291 AKAP8L (ENSUMAG00000001892) ENSUMAG00000001868 RASAL3 (ENSUMAG00000001780) PGLYRP2 (ENSUMAG00000001695) CYP4F22 (ENSUMAG00000001342) CYP4F3 (ENSUMAG00000001302) ENSUMAG00000001272 ENSUMAG00000001258 ENSUMAG00000001240 ENSUMAG00000001217 ENSUMAG00000001207 ENSUMAG00000001197 ENSUMAG00000001184 ENSUMAG00000001172 ENSUMAG00000001166 TPM4 (ENSUMAG00000001155) ##22 RAB8A (ENSUMAG00000001151) HSH2D (ENSUMAG00000001148) CIB3 (ENSUMAG00000001123) FAM32A (ENSUMAG00000001118) AP1M1 (ENSUMAG00000001099) ENSUMAG00000001080 ENSUMAG00000001075 CALR3 (ENSUMAG00000001071) ENSUMAG00000001063 CHERP (ENSUMAG00000000965) SLC35E1 (ENSUMAG00000000954) American black bear MODERN SPECIES 1417 ENSUAMG00000017291 ##22 TPM4 (ENSUAMG00000017286) ##22 RAB8A (ENSUAMG00000017284) ENSUAMG00000017280 CIB3 (ENSUAMG00000017269) FAM32A (ENSUAMG00000017267) AP1M1 (ENSUAMG00000017263) ENSUAMG00000017259 Laurasiatheria_c ANCESTRAL SPECIES 16 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000163407 ENSGT00940000154646.C ENSGT00940000164421 ENSGT01100000263561.C.d.a ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.b ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Equus ANCESTRAL SPECIES 23 ENSGT00940000160234 ENSGT00800000125293 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000163407.b ENSGT00940000154646.C.e.a ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.b ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Donkey MODERN SPECIES ENSEASG00005028624 ENSEASG00005023485 ENSEASG00005018317 ENSEASG00005000156 ##22 RAB8A (ENSEASG00005027616) HSH2D (ENSEASG00005000186) CIB3 (ENSEASG00005000199) FAM32A (ENSEASG00005000261) AP1M1 (ENSEASG00005025410) ENSEASG00005034734 ENSEASG00005000307 EPS15L1 (ENSEASG00005000338) CALR3 (ENSEASG00005000358) C19orf44 (ENSEASG00005000419) CHERP (ENSEASG00005000428) SLC35E1 (ENSEASG00005000435) MED26 (ENSEASG00005000460) ENSEASG00005028845 TMEM38A (ENSEASG00005000479) Horse MODERN SPECIES 13 ENSECAG00000037674 EPHX3 (ENSECAG00000018245) BRD4 (ENSECAG00000030438) AKAP8 (ENSECAG00000015084) AKAP8L (ENSECAG00000023532) WIZ (ENSECAG00000008043) RASAL3 (ENSECAG00000009236) CYP4F22 (ENSECAG00000012358) ENSECAG00000046401 ENSECAG00000034511 CYP4F119 (ENSECAG00000019949) ENSECAG00000046973 ENSECAG00000058777 CYP4F127P (ENSECAG00000019543) RAB8A (ENSECAG00000053880) TPM4 (ENSECAG00000022254) ##22 HSH2D (ENSECAG00000016757) FAM32A (ENSECAG00000017554) AP1M1 (ENSECAG00000019502) KLF2 (ENSECAG00000036534) EPS15L1 (ENSECAG00000019452) C21H19orf44 (ENSECAG00000009448) CHERP (ENSECAG00000012713) SLC35E1 (ENSECAG00000007905) MED26 (ENSECAG00000011280) SMIM7 (ENSECAG00000026861) TMEM38A (ENSECAG00000012297) NWD1 (ENSECAG00000016197) SIN3B (ENSECAG00000008366) F2RL3 (ENSECAG00000003515) HAUS8 (ENSECAG00000005865) Chiroptera ANCESTRAL SPECIES 44 ENSGT01100000263561.C.c ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT01100000263561.C.d.a ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.b ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Megabat MODERN SPECIES 3428 ENSPVAG00000009754 TPM4 (ENSPVAG00000009755) ##22 RAB8A (ENSPVAG00000009756) ENSPVAG00000009757 CIB3 (ENSPVAG00000009758) FAM32A (ENSPVAG00000009759) AP1M1 (ENSPVAG00000009760) Microchiroptera ANCESTRAL SPECIES 43 ENSGT01030000234635.a.a.a.b ENSGT00940000158035 ENSGT01100000263561.C.c ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT01090000260018.B.a.a ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.b ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 9 ILVBL (ENSRFEG00010021714) ENSRFEG00010021724 NOTCH3 (ENSRFEG00010010386) EPHX3 (ENSRFEG00010010444) BRD4 (ENSRFEG00010010523) AKAP8 (ENSRFEG00010010701) AKAP8L (ENSRFEG00010010807) WIZ (ENSRFEG00010010988) RASAL3 (ENSRFEG00010011211) PGLYRP2 (ENSRFEG00010011265) CYP4F22 (ENSRFEG00010011350) CYP4F8 (ENSRFEG00010011485) ENSRFEG00010012095 ENSRFEG00010012117 ENSRFEG00010012141 ENSRFEG00010012178 ##22 RAB8A (ENSRFEG00010012312) HSH2D (ENSRFEG00010012382) CIB3 (ENSRFEG00010012404) FAM32A (ENSRFEG00010012542) AP1M1 (ENSRFEG00010012672) KLF2 (ENSRFEG00010012949) EPS15L1 (ENSRFEG00010013076) CALR3 (ENSRFEG00010013317) C19orf44 (ENSRFEG00010013371) CHERP (ENSRFEG00010013631) SLC35E1 (ENSRFEG00010013756) MED26 (ENSRFEG00010013794) ENSRFEG00010013962 TMEM38A (ENSRFEG00010014024) NWD1 (ENSRFEG00010014152) Greater horseshoe bat MODERN SPECIES 23 COQ2 (ENSRFEG00010002560) HPSE (ENSRFEG00010002595) HELQ (ENSRFEG00010002668) ENSRFEG00010002735 ABRAXAS1 (ENSRFEG00010002770) GPAT3 (ENSRFEG00010002804) ENSRFEG00010002829 ENSRFEG00010002849 NKX6-1 (ENSRFEG00010002866) CDS1 (ENSRFEG00010002893) WDFY3 (ENSRFEG00010003045) ENSRFEG00010003308 ARHGAP24 (ENSRFEG00010003345) ENSRFEG00010003378 MAPK10 (ENSRFEG00010003450) ENSRFEG00010003614 ##22 PTPN13 (ENSRFEG00010003712) SLC10A6 (ENSRFEG00010003798) C4orf36 (ENSRFEG00010003812) AFF1 (ENSRFEG00010003846) KLHL8 (ENSRFEG00010003941) HSD17B11 (ENSRFEG00010003976) NUDT9 (ENSRFEG00010003996) SPARCL1 (ENSRFEG00010004013) DSPP (ENSRFEG00010004032) DMP1 (ENSRFEG00010004052) IBSP (ENSRFEG00010004083) MEPE (ENSRFEG00010004107) SPP1 (ENSRFEG00010004130) PKD2 (ENSRFEG00010004160) ENSRFEG00010004238 Microbat DUPLICATION Microbat MODERN SPECIES 1217 EPHX3 (ENSMLUG00000029171) ENSMLUG00000004852 ENSMLUG00000027375 AKAP8L (ENSMLUG00000005469) WIZ (ENSMLUG00000005482) RASAL3 (ENSMLUG00000027885) PGLYRP2 (ENSMLUG00000005486) CYP4F22 (ENSMLUG00000005489) CYP4F8 (ENSMLUG00000024967) ENSMLUG00000023349 ENSMLUG00000028047 ENSMLUG00000026342 ENSMLUG00000029631 ENSMLUG00000017518 ENSMLUG00000009960 ENSMLUG00000016177 ##22 RAB8A (ENSMLUG00000006982) HSH2D (ENSMLUG00000016182) CIB3 (ENSMLUG00000016192) ENSMLUG00000000585 AP1M1 (ENSMLUG00000000588) EPS15L1 (ENSMLUG00000000595) CALR3 (ENSMLUG00000013868) C19orf44 (ENSMLUG00000013874) CHERP (ENSMLUG00000013881) SLC35E1 (ENSMLUG00000013892) ENSMLUG00000013896 SMIM7 (ENSMLUG00000030442) TMEM38A (ENSMLUG00000013900) NWD1 (ENSMLUG00000013904) SIN3B (ENSMLUG00000013916) Microbat MODERN SPECIES 1453 ENSMLUG00000000126 UBASH3A (ENSMLUG00000000130) RSPH1 (ENSMLUG00000000135) SLC37A1 (ENSMLUG00000000139) PDE9A (ENSMLUG00000024657) ENSMLUG00000023875 ##22 WDR4 (ENSMLUG00000004898) NDUFV3 (ENSMLUG00000014816) PKNOX1 (ENSMLUG00000014821) CBS (ENSMLUG00000011885) CRYAA (ENSMLUG00000022251) ENSMLUG00000022683 ENSMLUG00000003131 ENSMLUG00000025468 Artiodactyla ANCESTRAL SPECIES 22 ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT01100000263561.C.d.a.w.b ENSGT01060000248581.A.b ENSGT01100000263561.C.d.a.w.a ENSGT00940000165043 ENSGT01100000263561.C.d.b.a ENSGT01100000263561.C.d.a.x ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000177900 Suina ANCESTRAL SPECIES 39 ENSGT01100000263561.C.d.b.a ENSGT01100000263561.C.d.a.w.b ENSGT01060000248581.A.b ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Pig MODERN SPECIES 10 ENSSSCG00000027903 CYP4F3 (ENSSSCG00000032765) ENSSSCG00000013843 ENSSSCG00000013841 ENSSSCG00000013840 ENSSSCG00000058941 ENSSSCG00000051195 ENSSSCG00000060720 ENSSSCG00000054624 ENSSSCG00000043208 ENSSSCG00000052832 ENSSSCG00000036596 ENSSSCG00000059742 ENSSSCG00000013851 ENSSSCG00000013850 TPM4 (ENSSSCG00000013849) ##22 RAB8A (ENSSSCG00000013848) HSH2D (ENSSSCG00000013853) CIB3 (ENSSSCG00000055450) FAM32A (ENSSSCG00000013855) AP1M1 (ENSSSCG00000013856) KLF2 (ENSSSCG00000038911) EPS15L1 (ENSSSCG00000013857) CALR3 (ENSSSCG00000013858) C19orf44 (ENSSSCG00000013859) CHERP (ENSSSCG00000013860) SLC35E1 (ENSSSCG00000013861) MED26 (ENSSSCG00000013862) SMIM7 (ENSSSCG00000013863) TMEM38A (ENSSSCG00000013864) NWD1 (ENSSSCG00000013865) Chacoan peccary MODERN SPECIES 769 ENSCWAG00000009037 AKAP8 (ENSCWAG00000009086) AKAP8L (ENSCWAG00000009126) WIZ (ENSCWAG00000009199) RASAL3 (ENSCWAG00000009433) PGLYRP2 (ENSCWAG00000009528) CYP4F22 (ENSCWAG00000009588) ENSCWAG00000009689 ENSCWAG00000009707 CYP4F3 (ENSCWAG00000007816) ENSCWAG00000008036 ENSCWAG00000008119 ENSCWAG00000008182 ENSCWAG00000008205 ENSCWAG00000008234 TPM4 (ENSCWAG00000008256) ##22 RAB8A (ENSCWAG00000008397) HSH2D (ENSCWAG00000008454) CIB3 (ENSCWAG00000008526) ENSCWAG00000008644 AP1M1 (ENSCWAG00000008740) KLF2 (ENSCWAG00000009049) EPS15L1 (ENSCWAG00000009107) CALR3 (ENSCWAG00000009717) C19orf44 (ENSCWAG00000009784) CHERP (ENSCWAG00000009961) SLC35E1 (ENSCWAG00000010004) MED26 (ENSCWAG00000010054) SMIM7 (ENSCWAG00000010095) TMEM38A (ENSCWAG00000010149) NWD1 (ENSCWAG00000010212) Artiodactyla_a ANCESTRAL SPECIES 23 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT01100000263561.C.d.a.w.b ENSGT01060000248581.A.b ENSGT01100000263561.C.d.b.a ENSGT01100000263561.C.d.a.w.a ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000177900 Camelidae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b ##22 Alpaca MODERN SPECIES 2612 TPM4 (ENSVPAG00000011730) ##22 ENSVPAG00000011732 CIB3 (ENSVPAG00000011736) Artiodactyla_b ANCESTRAL SPECIES 23 ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT01100000263561.C.d.a.w.b ENSGT01060000248581.A.b.h ENSGT01100000263561.C.d.a.w.a.a ENSGT00940000165043 ENSGT01100000263561.C.d.b.a ENSGT01100000263561.C.d.a.w.a.b ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000177900 Cetacea ANCESTRAL SPECIES 1 ENSGT00940000158035 ENSGT00940000154227.b ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT01100000263561.C.d.a.w.a.b ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000177900 Blue whale MODERN SPECIES 14 ENSBMSG00010005656 ENSBMSG00010005651 ENSBMSG00010005640 ZNF625 (ENSBMSG00010005629) ENSBMSG00010005618 ENSBMSG00010005602 ENSBMSG00010005588 ENSBMSG00010005571 OR1M1 (ENSBMSG00010005564) OR7G2 (ENSBMSG00010005555) ENSBMSG00010005550 ENSBMSG00010005546 ENSBMSG00010005536 ENSBMSG00010005523 ENSBMSG00010005516 TPM4 (ENSBMSG00010006457) ##22 RAB8A (ENSBMSG00010006428) ENSBMSG00010006411 CIB3 (ENSBMSG00010006392) FAM32A (ENSBMSG00010006374) AP1M1 (ENSBMSG00010006345) KLF2 (ENSBMSG00010006321) EPS15L1 (ENSBMSG00010006235) CALR3 (ENSBMSG00010006202) C19orf44 (ENSBMSG00010006183) CHERP (ENSBMSG00010006159) SLC35E1 (ENSBMSG00010006147) MED26 (ENSBMSG00010006136) SMIM7 (ENSBMSG00010006116) TMEM38A (ENSBMSG00010006085) ENSBMSG00010006065 Odontoceti ANCESTRAL SPECIES 1 ENSGT00940000158035 ENSGT00940000154227.b ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT01100000263561.C.d.a.w.a.b ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000177900 Odontoceti_a ANCESTRAL SPECIES 1 ENSGT01030000234635.a.a.a.b ENSGT00940000158035 ENSGT00940000154227.b ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000177900 Dolphin MODERN SPECIES 6766 TPM4 (ENSTTRG00000014542) ##22 RAB8A (ENSTTRG00000014541) HSH2D (ENSTTRG00000014540) CIB3 (ENSTTRG00000014539) Odontoceti_b ANCESTRAL SPECIES 1 ENSGT01030000234635.a.a.a.b ENSGT00940000158035 ENSGT00940000154227.b ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000177900 Vaquita MODERN SPECIES 14 OR1I1 (ENSPSNG00000002820) SYDE1 (ENSPSNG00000002802) ILVBL (ENSPSNG00000002775) ENSPSNG00000002701 NOTCH3 (ENSPSNG00000002628) EPHX3 (ENSPSNG00000002597) BRD4 (ENSPSNG00000002541) AKAP8 (ENSPSNG00000002503) AKAP8L (ENSPSNG00000002475) WIZ (ENSPSNG00000002342) RASAL3 (ENSPSNG00000002232) PGLYRP2 (ENSPSNG00000002198) CYP4F22 (ENSPSNG00000002170) ENSPSNG00000002149 CYP4F2 (ENSPSNG00000002051) TPM4 (ENSPSNG00000001964) ##22 RAB8A (ENSPSNG00000001927) HSH2D (ENSPSNG00000001906) CIB3 (ENSPSNG00000001871) FAM32A (ENSPSNG00000001837) AP1M1 (ENSPSNG00000001782) KLF2 (ENSPSNG00000001738) EPS15L1 (ENSPSNG00000001575) CALR3 (ENSPSNG00000001442) C19orf44 (ENSPSNG00000001424) CHERP (ENSPSNG00000001401) SLC35E1 (ENSPSNG00000001374) MED26 (ENSPSNG00000001357) SMIM7 (ENSPSNG00000001334) TMEM38A (ENSPSNG00000001298) SIN3B (ENSPSNG00000001166) Monodontidae ANCESTRAL SPECIES 17 ENSGT01030000234635.a.a.a.b ENSGT00940000158035 ENSGT00940000154227.b ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000154549.b ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000154646.C ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000177900 Beluga whale MODERN SPECIES 27 ILVBL (ENSDLEG00000006337) ENSDLEG00000006349 NOTCH3 (ENSDLEG00000006449) EPHX3 (ENSDLEG00000007108) BRD4 (ENSDLEG00000007120) AKAP8 (ENSDLEG00000007145) AKAP8L (ENSDLEG00000007195) WIZ (ENSDLEG00000007276) ENSDLEG00000007326 ENSDLEG00000007333 PGLYRP2 (ENSDLEG00000007335) CYP4F22 (ENSDLEG00000007343) ENSDLEG00000007349 CYP4F2 (ENSDLEG00000007351) ENSDLEG00000007382 TPM4 (ENSDLEG00000007519) ##22 RAB8A (ENSDLEG00000007527) ENSDLEG00000007534 ENSDLEG00000007538 CIB3 (ENSDLEG00000007551) FAM32A (ENSDLEG00000007565) AP1M1 (ENSDLEG00000007571) KLF2 (ENSDLEG00000007589) EPS15L1 (ENSDLEG00000007611) CALR3 (ENSDLEG00000000040) ENSDLEG00000000052 ENSDLEG00000000062 CHERP (ENSDLEG00000000145) SLC35E1 (ENSDLEG00000000542) MED26 (ENSDLEG00000000558) ENSDLEG00000000572 Narwhal MODERN SPECIES 298 CCDC105 (ENSMMNG00015004201) SYDE1 (ENSMMNG00015004186) ILVBL (ENSMMNG00015004159) ENSMMNG00015004146 NOTCH3 (ENSMMNG00015004109) EPHX3 (ENSMMNG00015004079) BRD4 (ENSMMNG00015004039) AKAP8 (ENSMMNG00015004009) AKAP8L (ENSMMNG00015003988) WIZ (ENSMMNG00015003924) RASAL3 (ENSMMNG00015003858) PGLYRP2 (ENSMMNG00015003835) CYP4F22 (ENSMMNG00015003807) ENSMMNG00015003776 ENSMMNG00015003765 TPM4 (ENSMMNG00015003742) ##22 RAB8A (ENSMMNG00015003724) HSH2D (ENSMMNG00015003698) CIB3 (ENSMMNG00015003673) FAM32A (ENSMMNG00015003638) AP1M1 (ENSMMNG00015003576) KLF2 (ENSMMNG00015003540) EPS15L1 (ENSMMNG00015003374) CALR3 (ENSMMNG00015003287) C19orf44 (ENSMMNG00015003248) CHERP (ENSMMNG00015003215) SLC35E1 (ENSMMNG00015003184) MED26 (ENSMMNG00015003169) SMIM7 (ENSMMNG00015003142) TMEM38A (ENSMMNG00015003105) ENSMMNG00015003083 Pecora ANCESTRAL SPECIES ENSGT00940000154646.C.j.b.b ENSGT00940000154646.C.j.b.a ENSGT01100000263561.C.d.a.w.b ENSGT01060000248581.A.b.h ENSGT01100000263561.C.d.b.a.h.a.b ENSGT01100000263561.C.d.a.w.a.a.b ENSGT01100000263561.C.d.a.w.a.a.a ENSGT00940000165043 ENSGT01100000263561.C.d.b.a.h.a.a ENSGT01100000263561.C.d.b.b.e ENSGT01100000263561.C.d.a.w.a.b.a ENSGT01100000263561.C.d.b.a.g ENSGT01100000263561.C.d.a.w.a.b.b ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Yarkand deer MODERN SPECIES 32 WIZ (ENSCHYG00000003129) RASAL3 (ENSCHYG00000003018) PGLYRP2 (ENSCHYG00000003000) ENSCHYG00000002926 ENSCHYG00000002683 ENSCHYG00000002632 ENSCHYG00000002619 ENSCHYG00000002611 ENSCHYG00000002606 ENSCHYG00000002602 ENSCHYG00000002597 ENSCHYG00000002587 ENSCHYG00000002578 ENSCHYG00000002567 ENSCHYG00000002558 TPM4 (ENSCHYG00000002533) ##22 RAB8A (ENSCHYG00000002515) HSH2D (ENSCHYG00000002499) CIB3 (ENSCHYG00000002478) ENSCHYG00000002452 AP1M1 (ENSCHYG00000002379) KLF2 (ENSCHYG00000002284) EPS15L1 (ENSCHYG00000002153) CALR3 (ENSCHYG00000002071) ENSCHYG00000002057 C19orf44 (ENSCHYG00000002039) CHERP (ENSCHYG00000002017) SLC35E1 (ENSCHYG00000001989) MED26 (ENSCHYG00000001946) TMEM38A (ENSCHYG00000001899) NWD1 (ENSCHYG00000001771) Percora_a ANCESTRAL SPECIES ENSGT01100000263561.C.d.b.a.g.a.a ENSGT01100000263561.C.d.a.w.a.a.a ENSGT00940000165043 ENSGT01100000263561.C.d.b.a.h.a.a ENSGT01100000263561.C.d.b.b.e ENSGT01100000263561.C.d.b.a.g.a.b ENSGT01100000263561.C.d.b.a.h.a.b ENSGT01060000248581.A.b.h ENSGT01100000263561.C.d.a.w.a.a.b ENSGT01100000263561.C.d.b.a.h.b ENSGT01100000263561.C.d.a.w.a.b.a ENSGT01100000263561.C.d.b.a.g.b ENSGT01100000263561.C.d.a.w.a.b.b ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Bovidae ANCESTRAL SPECIES ENSGT00940000154646.C.j.a.b ENSGT00940000154646.C.j.a.a.b ENSGT00940000154646.C.j.b.b ENSGT00940000154646.C.j.b.a ENSGT01100000263561.C.d.a.w.b ENSGT01060000248581.A.b.h ENSGT01100000263561.C.d.b.a.h.a.b ENSGT01100000263561.C.d.a.w.a.a.b ENSGT01100000263561.C.d.b.a.g.a.a.b ENSGT01100000263561.C.d.a.w.a.b.a ENSGT01100000263561.C.d.b.a.g.b ENSGT01100000263561.C.d.b.b.f ENSGT01100000263561.C.d.a.w.a.b.b ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000006922.m.b.b.a.z ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f Caprinae ANCESTRAL SPECIES 32 ENSGT01100000263561.C.d.a.w.b ENSGT01100000263561.C.d.a.w.a.a.b ENSGT01100000263561.C.d.a.w.a.a.a ENSGT00940000165043 ENSGT01100000263561.C.d.b.b.e ENSGT01100000263561.C.d.b.a.g.a.b ENSGT00940000154227.b.d ENSGT01100000263561.C.d.a.w.a.b.a ENSGT01100000263561.C.d.b.a.g.a.a.a.a ENSGT00940000154227.b.c ENSGT01100000263561.C.d.b.a.g.b ENSGT01100000263561.C.d.b.b.f ENSGT01100000263561.C.d.a.w.a.b.b ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Rambouillet Sheep MODERN SPECIES 21 ENSOARG00020000254 OR7C2 (ENSOARG00020000235) ENSOARG00020000217 ENSOARG00020000201 ENSOARG00020000148 ENSOARG00020000121 ENSOARG00020018966 ENSOARG00020018900 ENSOARG00020018882 ENSOARG00020018863 ENSOARG00020018845 ENSOARG00020018821 ENSOARG00020018807 ENSOARG00020018781 ENSOARG00020018762 TPM4 (ENSOARG00020018603) ##22 RAB8A (ENSOARG00020018526) ENSOARG00020018500 CIB3 (ENSOARG00020018403) FAM32A (ENSOARG00020018302) AP1M1 (ENSOARG00020017923) KLF2 (ENSOARG00020017838) EPS15L1 (ENSOARG00020016263) CALR3 (ENSOARG00020016117) C19orf44 (ENSOARG00020016066) CHERP (ENSOARG00020015998) SLC35E1 (ENSOARG00020015942) MED26 (ENSOARG00020015901) SMIM7 (ENSOARG00020015755) TMEM38A (ENSOARG00020015674) NWD1 (ENSOARG00020014908) Goat DUPLICATION Goat MODERN SPECIES 26 ENSCHIG00000013080 ENSCHIG00000013897 ENSCHIG00000024667 ENSCHIG00000004588 ENSCHIG00000023274 ENSCHIG00000013009 ENSCHIG00000007795 ENSCHIG00000001713 ENSCHIG00000007548 ENSCHIG00000026839 ENSCHIG00000020437 ENSCHIG00000001218 ENSCHIG00000013937 ENSCHIG00000020743 ENSCHIG00000012842 ENSCHIG00000009601 ##22 RAB8A (ENSCHIG00000020646) ENSCHIG00000016905 CIB3 (ENSCHIG00000026288) ENSCHIG00000020839 AP1M1 (ENSCHIG00000015265) KLF2 (ENSCHIG00000008795) EPS15L1 (ENSCHIG00000018388) CALR3 (ENSCHIG00000015217) ENSCHIG00000026964 ENSCHIG00000023160 CHERP (ENSCHIG00000013765) SLC35E1 (ENSCHIG00000008462) MED26 (ENSCHIG00000025800) SMIM7 (ENSCHIG00000026993) TMEM38A (ENSCHIG00000024027) Goat MODERN SPECIES 98 PHF8 (ENSCHIG00000000294) ENSCHIG00000000258 ##22 ENSCHIG00000000217 Bovinae ANCESTRAL SPECIES 34 ENSGT01060000248581.A.b.h ENSGT01100000263561.C.d.b.a.h.a.b ENSGT01100000263561.C.d.a.w.a.a.b ENSGT01100000263561.C.d.a.w.a.a.a ENSGT00940000165043 ENSGT01100000263561.C.d.b.a.h.a.a ENSGT01100000263561.C.d.b.b.e ENSGT01100000263561.C.d.b.a.g.a.b ENSGT01100000263561.C.d.b.a.g.a.a.a.b ENSGT01100000263561.C.d.b.a.g.a.a.a.a ENSGT01100000263561.C.d.a.w.a.b.a ENSGT01100000263561.C.d.b.a.g.b ENSGT01100000263561.C.d.a.w.a.b.b ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000006922.m.b.b.a.z ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f Bos ANCESTRAL SPECIES 34 ENSGT01100000263561.C.d.a.w.b ENSGT01060000248581.A.b.h.a.a ENSGT01100000263561.C.d.b.a.h.a.b ENSGT01100000263561.C.d.a.w.a.a.b ENSGT01100000263561.C.d.a.w.a.a.a ENSGT00940000165043 ENSGT01100000263561.C.d.b.a.h.a.a ENSGT01100000263561.C.d.b.b.e ENSGT01100000263561.C.d.b.a.g.a.b ENSGT01060000248581.A.b.h.a.b ENSGT01100000263561.C.d.a.w.a.b.a ENSGT01100000263561.C.d.b.a.g.b ENSGT01100000263561.C.d.a.w.a.b.b ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.l ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000006922.m.b.b.a.z ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f Bos_b ANCESTRAL SPECIES 36 ENSGT01060000248581.A.b.h.a.a ENSGT01100000263561.C.d.b.a.h.a.b ENSGT01100000263561.C.d.a.w.a.a.b ENSGT01100000263561.C.d.a.w.a.a.a ENSGT00940000165043 ENSGT01100000263561.C.d.b.a.h.a.a ENSGT01100000263561.C.d.b.b.e ENSGT01100000263561.C.d.b.a.g.a.b ENSGT00940000154227.b ENSGT00940000158035.j ENSGT01100000263561.C.d.a.w.a.b.a ENSGT01100000263561.C.d.b.a.g.b ENSGT01100000263561.C.d.a.w.a.b.b ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.l ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000006922.m.b.b.a.z ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f Cow MODERN SPECIES 26 CYP4F47 (ENSBTAG00000038549) CYP4F2 (ENSBTAG00000039319) OR10H1I (ENSBTAG00000006216) OR10H4N (ENSBTAG00000050551) OR10H1 (ENSBTAG00000001084) ENSBTAG00000053594 OR1AE1 (ENSBTAG00000008335) OR10H4I (ENSBTAG00000038980) ENSBTAG00000049116 OR10H4 (ENSBTAG00000053255) OR10H1G (ENSBTAG00000018736) OR10H4G (ENSBTAG00000049883) ENSBTAG00000033092 OR2Z11 (ENSBTAG00000050547) OR1AB2 (ENSBTAG00000039983) TPM4 (ENSBTAG00000004553) ##22 RAB8A (ENSBTAG00000038696) HSH2D (ENSBTAG00000038154) CIB3 (ENSBTAG00000016179) FAM32A (ENSBTAG00000046846) AP1M1 (ENSBTAG00000013329) KLF2 (ENSBTAG00000052504) EPS15L1 (ENSBTAG00000009990) CALR3 (ENSBTAG00000033222) ENSBTAG00000027878 C7H19orf44 (ENSBTAG00000002447) CHERP (ENSBTAG00000005289) SLC35E1 (ENSBTAG00000005295) MED26 (ENSBTAG00000005312) SMIM7 (ENSBTAG00000013613) TMEM38A (ENSBTAG00000013614) Hybrid Bos Indicus DUPLICATION Hybrid Bos Indicus MODERN SPECIES 27 CCDC171 (ENSBIXG00005023307) PSIP1 (ENSBIXG00005023133) SNAPC3 (ENSBIXG00005023074) TTC39B (ENSBIXG00005022889) FREM1 (ENSBIXG00005022347) CER1 (ENSBIXG00005022110) ZDHHC21 (ENSBIXG00005022088) ENSBIXG00005007219 ENSBIXG00005022053 NFIB (ENSBIXG00005022011) ENSBIXG00005021690 MPDZ (ENSBIXG00005021591) ENSBIXG00005021107 LURAP1L (ENSBIXG00005021080) TYRP1 (ENSBIXG00005021057) ENSBIXG00005021026 ##22 ENSBIXG00005020918 ENSBIXG00005020897 PTPRD (ENSBIXG00005007348) ENSBIXG00005020457 DMAC1 (ENSBIXG00005020420) KDM4C (ENSBIXG00005020365) ENSBIXG00005020300 ENSBIXG00005020277 GLDC (ENSBIXG00005003384) ENSBIXG00005006821 UHRF2 (ENSBIXG00005020141) ENSBIXG00005003293 ENSBIXG00005020039 ENSBIXG00005020011 ENSBIXG00005019971 Hybrid Bos Indicus MODERN SPECIES 26 ENSBIXG00005016792 ENSBIXG00005016779 ENSBIXG00005016768 ENSBIXG00005016754 ENSBIXG00005016739 ENSBIXG00005007326 ENSBIXG00005016712 ENSBIXG00005016704 ENSBIXG00005016696 ENSBIXG00005016683 ENSBIXG00005002696 ENSBIXG00005002691 ENSBIXG00005016661 ENSBIXG00005016652 ENSBIXG00005016634 TPM4 (ENSBIXG00005016608) ##22 RAB8A (ENSBIXG00005016437) HSH2D (ENSBIXG00005016408) CIB3 (ENSBIXG00005016387) ENSBIXG00005002600 AP1M1 (ENSBIXG00005000096) ENSBIXG00005016253 KLF2 (ENSBIXG00005016244) EPS15L1 (ENSBIXG00005016176) CALR3 (ENSBIXG00005002541) ENSBIXG00005002534 C19orf44 (ENSBIXG00005015971) CHERP (ENSBIXG00005015964) SLC35E1 (ENSBIXG00005015934) MED26 (ENSBIXG00005002507) SMIM7 (ENSBIXG00005015886) Bos_a ANCESTRAL SPECIES 29 ENSGT00940000161507 ENSGT00940000155021.n ENSGT00940000163407.j ENSGT00940000154646.C.j.a.b ENSGT00940000154646.C.j.b.b ENSGT00940000154646.C.j.b.a ENSGT01100000263561.C.d.a.w.b ENSGT01060000248581.A.b.h.a.a ENSGT01100000263561.C.d.a.w.a.a.b ENSGT01100000263561.C.d.b.a.g.a.b ENSGT00940000165043 ENSGT01100000263561.C.d.b.a.h.a.a ENSGT01100000263561.C.d.b.b.e ENSGT01090000260018.B.a.a ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811.l ENSGT00940000157924 ENSGT00940000163163 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 Wild yak MODERN SPECIES 1291 ENSBMUG00000009487 ENSBMUG00000009477 TPM4 (ENSBMUG00000009454) ##22 RAB8A (ENSBMUG00000009407) HSH2D (ENSBMUG00000009388) CIB3 (ENSBMUG00000009362) ENSBMUG00000009343 AP1M1 (ENSBMUG00000009323) ENSBMUG00000009220 EPS15L1 (ENSBMUG00000009128) CALR3 (ENSBMUG00000009063) ENSBMUG00000009055 ENSBMUG00000009049 CHERP (ENSBMUG00000009024) SLC35E1 (ENSBMUG00000008999) MED26 (ENSBMUG00000008986) SMIM7 (ENSBMUG00000008920) TMEM38A (ENSBMUG00000008809) Domestic yak MODERN SPECIES 27 ENSBGRG00000023633 ENSBGRG00000023854 ENSBGRG00000024011 ENSBGRG00000024190 ENSBGRG00000024273 ENSBGRG00000024282 ENSBGRG00000024300 ENSBGRG00000024308 ENSBGRG00000024316 ENSBGRG00000024325 ENSBGRG00000024350 ENSBGRG00000010531 ENSBGRG00000010604 ENSBGRG00000010641 ENSBGRG00000010678 TPM4 (ENSBGRG00000010734) ##22 RAB8A (ENSBGRG00000010945) ENSBGRG00000011095 CIB3 (ENSBGRG00000011178) ENSBGRG00000011352 AP1M1 (ENSBGRG00000011574) KLF2 (ENSBGRG00000012120) EPS15L1 (ENSBGRG00000012185) CALR3 (ENSBGRG00000013489) ENSBGRG00000013593 C19orf44 (ENSBGRG00000013614) CHERP (ENSBGRG00000013675) SLC35E1 (ENSBGRG00000014574) MED26 (ENSBGRG00000014660) ENSBGRG00000014733 SMIM7 (ENSBGRG00000014759) American bison DUPLICATION American bison MODERN SPECIES 3138 ENSBBBG00000012872 ENSBBBG00000012869 ENSBBBG00000012864 ENSBBBG00000012860 ENSBBBG00000002530 ##22 RAB8A (ENSBBBG00000002520) HSH2D (ENSBBBG00000002511) CIB3 (ENSBBBG00000002506) ENSBBBG00000001765 AP1M1 (ENSBBBG00000012827) ENSBBBG00000012776 EPS15L1 (ENSBBBG00000012765) CALR3 (ENSBBBG00000012660) ENSBBBG00000012617 C19orf44 (ENSBBBG00000012609) CHERP (ENSBBBG00000012600) SLC35E1 (ENSBBBG00000012572) MED26 (ENSBBBG00000012563) SMIM7 (ENSBBBG00000012541) TMEM38A (ENSBBBG00000002393) American bison MODERN SPECIES 3290 CNTLN (ENSBBBG00000018243) ENSBBBG00000004478 ENSBBBG00000018269 BNC2 (ENSBBBG00000018306) CCDC171 (ENSBBBG00000018338) PSIP1 (ENSBBBG00000018434) SNAPC3 (ENSBBBG00000004526) TTC39B (ENSBBBG00000004559) FREM1 (ENSBBBG00000018588) CER1 (ENSBBBG00000004604) ZDHHC21 (ENSBBBG00000018604) NFIB (ENSBBBG00000004689) MPDZ (ENSBBBG00000009182) LURAP1L (ENSBBBG00000019440) TYRP1 (ENSBBBG00000005231) ENSBBBG00000005234 ##22 ENSBBBG00000005240 PTPRD (ENSBBBG00000005080) DMAC1 (ENSBBBG00000020176) KDM4C (ENSBBBG00000005462) ENSBBBG00000020239 GLDC (ENSBBBG00000005035) UHRF2 (ENSBBBG00000020305) ENSBBBG00000020318 ENSBBBG00000020325 IL33 (ENSBBBG00000020339) Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 1231 ENSMMSG00000021505 ENSMMSG00000021590 ENSMMSG00000022082 ENSMMSG00000022115 ENSMMSG00000022128 ENSMMSG00000022140 ENSMMSG00000022149 ENSMMSG00000022153 ENSMMSG00000022163 ENSMMSG00000022177 ENSMMSG00000022185 ENSMMSG00000013931 ENSMMSG00000013940 ENSMMSG00000013948 ENSMMSG00000013959 ENSMMSG00000013969 ##22 RAB8A (ENSMMSG00000014013) ENSMMSG00000014065 CIB3 (ENSMMSG00000014086) ENSMMSG00000014124 AP1M1 (ENSMMSG00000014184) KLF2 (ENSMMSG00000014385) EPS15L1 (ENSMMSG00000014438) CALR3 (ENSMMSG00000014716) C19orf44 (ENSMMSG00000014736) ENSMMSG00000014756 CHERP (ENSMMSG00000014766) SLC35E1 (ENSMMSG00000014784) MED26 (ENSMMSG00000014806) ENSMMSG00000014824 TMEM38A (ENSMMSG00000014854) Siberian musk deer MODERN SPECIES 90 ENSMMSG00000004954 ENSMMSG00000004970 GPR173 (ENSMMSG00000004982) TSPYL2 (ENSMMSG00000004991) ENSMMSG00000005022 KDM5C (ENSMMSG00000005040) IQSEC2 (ENSMMSG00000005270) SMC1A (ENSMMSG00000005622) RIBC1 (ENSMMSG00000005693) HSD17B10 (ENSMMSG00000005843) HUWE1 (ENSMMSG00000005955) ENSMMSG00000006513 PHF8 (ENSMMSG00000006574) ENSMMSG00000006866 ##22 ENSMMSG00000006940 ENSMMSG00000007398 FGD1 (ENSMMSG00000007433) GNL3L (ENSMMSG00000007509) MAGED2 (ENSMMSG00000007590) ENSMMSG00000007676 PFKFB1 (ENSMMSG00000007731) APEX2 (ENSMMSG00000007815) ALAS2 (ENSMMSG00000007838) ENSMMSG00000007905 MAGEH1 (ENSMMSG00000007925) FOXR2 (ENSMMSG00000007940) RRAGB (ENSMMSG00000007959) KLF8 (ENSMMSG00000008026) UBQLN2 (ENSMMSG00000008075) Atlantogenata ANCESTRAL SPECIES 42 ENSGT00940000158035 ENSGT00940000154227.b ENSGT00940000160234 ENSGT00940000162086 ENSGT00940000162790.a ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT01100000263561.C.d.a ENSGT00940000165043 ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 ENSGT00940000159560 Xenarthra ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b ##22 Armadillo MODERN SPECIES 2876 TPM4 (ENSDNOG00000035115) ##22 ENSDNOG00000041950 ENSDNOG00000042124 Afrotheria ANCESTRAL SPECIES 45 ENSGT01030000234635.a.a.a.b ENSGT00940000158035 ENSGT00940000154227.b ENSGT00940000160234 ENSGT00940000162086 ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT01100000263561.C.d.a ENSGT00940000165043 ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 ENSGT00940000159560 Tenrec MODERN SPECIES 6039 ENSETEG00000005652 ##22 Afrotheria_a ANCESTRAL SPECIES 44 ENSGT01030000234635.a.a.a.b ENSGT00940000158035 ENSGT00940000154227.b ENSGT00940000160234 ENSGT00940000162086 ENSGT00530000063777.a.a.b ENSGT00530000063777.a.a.a ENSGT00940000159979 ENSGT00940000161423 ENSGT00940000158718 ENSGT00940000161507 ENSGT00940000155021.n ENSGT01100000263561.C.d.a ENSGT00940000165043 ENSGT00940000162704 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246 ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000155438.b ENSGT00950000182915.b.b.b.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000159007 ENSGT00390000000259 ENSGT00390000014626 ENSGT00390000018845.f ENSGT00940000161635 ENSGT00940000159560 Elephant MODERN SPECIES 270 AKAP8L (ENSLAFG00000004599) WIZ (ENSLAFG00000004604) RASAL3 (ENSLAFG00000020948) ENSLAFG00000008772 CYP4F22 (ENSLAFG00000023092) ENSLAFG00000030083 ENSLAFG00000029960 ENSLAFG00000029003 ENSLAFG00000003300 ENSLAFG00000030034 ENSLAFG00000026585 ENSLAFG00000031874 ENSLAFG00000027993 ENSLAFG00000030136 ENSLAFG00000032302 TPM4 (ENSLAFG00000004031) ##22 RAB8A (ENSLAFG00000004032) ENSLAFG00000013758 CIB3 (ENSLAFG00000013757) FAM32A (ENSLAFG00000009394) AP1M1 (ENSLAFG00000009395) EPS15L1 (ENSLAFG00000023188) CALR3 (ENSLAFG00000009094) C19orf44 (ENSLAFG00000009095) CHERP (ENSLAFG00000009096) SLC35E1 (ENSLAFG00000009099) MED26 (ENSLAFG00000028973) SMIM7 (ENSLAFG00000020956) TMEM38A (ENSLAFG00000029101) NWD1 (ENSLAFG00000007110) SIN3B (ENSLAFG00000007273) Hyrax MODERN SPECIES 5103 TPM4 (ENSPCAG00000006525) ##22 RAB8A (ENSPCAG00000006568) Actinopterygii ANCESTRAL SPECIES 202 ENSGT00940000160466 ENSGT00940000161678 ENSGT00940000157246 ENSGT00390000013811 ENSGT00940000157924 ENSGT00940000164495 ENSGT00940000155438.b ENSGT00390000012078.a.a ENSGT00950000182915.b.b.a.b ENSGT00390000002505 ENSGT00730000111147 ENSGT00940000155916 ENSGT00940000165061 ENSGT00940000166556 ENSGT00940000157178 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00950000182891.a.a.b.a.a Neopterygii ANCESTRAL SPECIES 69 ENSGT00940000166556 ENSGT00940000165061 ENSGT00940000155916 ENSGT00730000111147 ENSGT00390000002505 ENSGT00950000182915.b.b.a.b ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495 ENSGT00940000157924 ENSGT00940000157246.a ENSGT00940000157178 ENSGT01030000234542.b.b.a.a.a.b ##22 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00940000160466 ENSGT00390000002877 ENSGT00390000005338 ENSGT00900000141362 ENSGT00940000165287 ENSGT00940000160888 ENSGT01030000235192 ENSGT00390000005847 ENSGT00940000165063 ENSGT00940000159972 ENSGT00950000182993.A.a ENSGT00390000012434 ENSGT00390000007212 Spotted gar MODERN SPECIES 657 malt2 (ENSLOCG00000003877) mrpl54 (ENSLOCG00000003860) fam32a (ENSLOCG00000003843) ap1m1 (ENSLOCG00000003821) klf2a (ENSLOCG00000003791) EPS15L1 (ENSLOCG00000003755) rad23ab (ENSLOCG00000003740) ENSLOCG00000003722 ENSLOCG00000003706 C19orf44 (ENSLOCG00000003684) cherp (ENSLOCG00000003654) safb (ENSLOCG00000003613) ENSLOCG00000003603 ENSLOCG00000003571 lpl (ENSLOCG00000003542) tpm4a (ENSLOCG00000003523) ##22 ENSLOCG00000003507 RAB8A (ENSLOCG00000003485) ENSLOCG00000003473 CIB3 (ENSLOCG00000003454) tax1bp3 (ENSLOCG00000003428) ctns (ENSLOCG00000003402) ENSLOCG00000003388 ccl25b (ENSLOCG00000003372) ENSLOCG00000003359 pole4 (ENSLOCG00000003351) ccl44 (ENSLOCG00000003335) pnhd (ENSLOCG00000003323) admp (ENSLOCG00000003305) ENSLOCG00000003295 slc1a6 (ENSLOCG00000003270) Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 180 ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT01030000235192 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00390000005338 ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000165061 ENSGT00940000166556 ENSGT00940000157178.h ENSGT01030000234542.b.b.a.a.a.b.wb.a ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 428 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 Otomorpha ANCESTRAL SPECIES 5 ENSGT00940000158081.o.b ENSGT00940000157413 ENSGT00390000015368.a.a.c ENSGT00940000162806.b.a ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00940000156466 ENSGT00390000018651.a ENSGT00950000182993.A.a.j ENSGT00390000007336.a.b ENSGT00940000155569.a.b ENSGT00940000154456.hb.a ENSGT00390000005826.b.f ENSGT00940000159325 Otophysi ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 Characiphysae ANCESTRAL SPECIES 34 ENSGT00940000158081.o.b ENSGT00940000157413 ENSGT00390000015368.a.a.c ENSGT00940000162806.b.a ENSGT00940000181505 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00410000025695.a ENSGT00390000012198.b ENSGT00390000004097.a.f ENSGT00390000000719 ENSGT00940000165622.b ENSGT00510000049027.d ENSGT00390000009230.b ENSGT00940000158050 Characiphysae_b ANCESTRAL SPECIES 57 ENSGT00940000158081.o.b ENSGT00940000157413 ENSGT00390000015368.a.a.c ENSGT00940000162806.b.a ENSGT00940000181505 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00410000025695.a ENSGT00390000012198.b ENSGT00390000004097.a.f ENSGT00390000000719 ENSGT00940000165622.b ENSGT00510000049027.d ENSGT00390000009230.b ENSGT00940000158050 ENSGT01030000234767.b.a ENSGT00640000091492.a.d ENSGT00940000157047.m.a.a ENSGT00530000063698.a.b.d ENSGT00940000155020.u.b.f Characoidei ANCESTRAL SPECIES 45 ENSGT00940000158081.o.b ENSGT00940000157413 ENSGT00390000015368.a.a.c ENSGT00940000162806.b.a ENSGT00940000181505 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00410000025695.a ENSGT00390000012198.b ENSGT00390000004097.a.f ENSGT00390000000719 ENSGT00940000165622.b ENSGT00510000049027.d ENSGT00390000009230.b ENSGT00940000158050 ENSGT01030000234767.b.a ENSGT00640000091492.a.d ENSGT00940000157047.m.a.a ENSGT00530000063698.a.b.d ENSGT00940000155020.u.b.f Red-bellied piranha MODERN SPECIES 48 upf1 (ENSPNAG00000025614) pgpep1 (ENSPNAG00000025537) jund (ENSPNAG00000006056) ENSPNAG00000025498 loxl5b (ENSPNAG00000006766) nmrk2 (ENSPNAG00000003921) ATCAY (ENSPNAG00000025397) cplx4c (ENSPNAG00000025384) ENSPNAG00000003912 rx2 (ENSPNAG00000025348) ENSPNAG00000025330 ENSPNAG00000005719 klf2b (ENSPNAG00000025132) ap1m1 (ENSPNAG00000025118) LPL (ENSPNAG00000025045) TPM4 (ENSPNAG00000025032) ##22 rab8a (ENSPNAG00000005890) CIB3 (ENSPNAG00000024947) SUGP1 (ENSPNAG00000004723) MAU2 (ENSPNAG00000006354) GATAD2A (ENSPNAG00000024686) NDUFA13 (ENSPNAG00000024633) YJEFN3 (ENSPNAG00000024601) cirbpa (ENSPNAG00000024569) ENSPNAG00000024555 ENSPNAG00000003830 stk11 (ENSPNAG00000005021) ENSPNAG00000024493 vapal (ENSPNAG00000024482) ENSPNAG00000005637 APCDD1 (ENSPNAG00000024431) Mexicana tetra MODERN SPECIES 8 pnp5b (ENSAMXG00000035060) ENSAMXG00000038330 KCNJ10 (ENSAMXG00000018055) foxl2b (ENSAMXG00000018076) ENSAMXG00000043022 TGM1 (ENSAMXG00000033868) abhd4 (ENSAMXG00000040865) dad1 (ENSAMXG00000041545) ENSAMXG00000034304 ENSAMXG00000037234 ENSAMXG00000014005 ENSAMXG00000039322 ENSAMXG00000044095 ENSAMXG00000033632 LPL (ENSAMXG00000002796) TPM4 (ENSAMXG00000032280) ##22 RAB8A (ENSAMXG00000002853) CIB3 (ENSAMXG00000038031) SUGP1 (ENSAMXG00000002872) MAU2 (ENSAMXG00000002971) GATAD2A (ENSAMXG00000035421) NDUFA13 (ENSAMXG00000038688) YJEFN3 (ENSAMXG00000035910) cirbpa (ENSAMXG00000002894) ENSAMXG00000031123 ENSAMXG00000041704 stk11 (ENSAMXG00000009149) vapal (ENSAMXG00000009145) ENSAMXG00000034883 APCDD1 (ENSAMXG00000042208) epb41l3b (ENSAMXG00000041057) Channel catfish MODERN SPECIES 12 UPF1 (ENSIPUG00000005108) Pgpep1 (ENSIPUG00000005216) jund (ENSIPUG00000005241) Lox (ENSIPUG00000005255) nmrk2 (ENSIPUG00000005267) ATCAY (ENSIPUG00000005280) cplx4c (ENSIPUG00000005311) rx2 (ENSIPUG00000005326) CALR (ENSIPUG00000005374) ENSIPUG00000005411 ENSIPUG00000005421 ENSIPUG00000006478 Klf2 (ENSIPUG00000006554) AP1M1 (ENSIPUG00000006581) LPL (ENSIPUG00000006646) TPM4 (ENSIPUG00000006687) ##22 rab8a (ENSIPUG00000006761) CIB3 (ENSIPUG00000006864) sugp1 (ENSIPUG00000006883) mau2 (ENSIPUG00000006952) GATAD2A (ENSIPUG00000007020) ndufa13 (ENSIPUG00000007031) YJEFN3 (ENSIPUG00000007059) CIRBP (ENSIPUG00000007089) midn (ENSIPUG00000007122) ENSIPUG00000007136 stk11 (ENSIPUG00000007147) ENSIPUG00000007173 ENSIPUG00000007177 PNP (ENSIPUG00000007195) KCNJ10 (ENSIPUG00000007237) Clupeiformes ANCESTRAL SPECIES 65 ENSGT00940000156132.g ENSGT00940000164927.b ENSGT00940000158081.o.b ENSGT00940000157413.l ENSGT00390000015368.a.a.c ENSGT00940000162806.b.a ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.d ENSGT00940000157924 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.b ENSGT00900000141362.a.a ENSGT00950000182993.A.a.j ENSGT00390000007336.a.b ENSGT00940000155569.a.b ENSGT00940000154456.hb.a ENSGT00390000005826.b.f ENSGT01030000234539.a.a.a.e ENSGT00950000183103.d.b.a.a ENSGT00940000164500.a ENSGT00720000108823 Denticle herring MODERN SPECIES 14 eeig2a (ENSDCDG00000018655) HOMER3 (ENSDCDG00000018684) upf1 (ENSDCDG00000018778) pgpep1 (ENSDCDG00000018895) jund (ENSDCDG00000018897) loxl5b (ENSDCDG00000018906) nmrk2 (ENSDCDG00000018931) cplx4c (ENSDCDG00000018929) ATCAY (ENSDCDG00000018937) rx2 (ENSDCDG00000018940) ENSDCDG00000018941 ENSDCDG00000018959 ENSDCDG00000019569 ap1m1 (ENSDCDG00000019589) LPL (ENSDCDG00000019746) TPM4 (ENSDCDG00000019757) ##22 rab8a (ENSDCDG00000019941) CIB3 (ENSDCDG00000019945) admp (ENSDCDG00000019949) pnhd (ENSDCDG00000019951) ENSDCDG00000019953 ENSDCDG00000019959 ranbp3b (ENSDCDG00000019990) NRTN (ENSDCDG00000020156) ABHD8 (ENSDCDG00000020163) napgb (ENSDCDG00000020227) pias4b (ENSDCDG00000020322) ENSDCDG00000020367 ENSDCDG00000020371 sf3a2 (ENSDCDG00000020380) plekhj1 (ENSDCDG00000020384) Euteleosteomorpha ANCESTRAL SPECIES 97 ENSGT00400000024256 ENSGT01030000236342 ENSGT00940000153424.a.a.d ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 Percomorphaceae ANCESTRAL SPECIES 6 ENSGT00940000161753 ENSGT00940000153424.a.a.d ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00950000182915.b.b.a.b.c.a ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00940000165287.b ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j Tiger tail seahorse MODERN SPECIES 488 insra (ENSHCOG00000002618) mfsd14a2 (ENSHCOG00000002592) ENSHCOG00000002576 loxl5b (ENSHCOG00000002565) nmrk2 (ENSHCOG00000002532) ATCAY (ENSHCOG00000002527) rx2 (ENSHCOG00000002503) ENSHCOG00000002483 ENSHCOG00000002479 ENSHCOG00000002466 ENSHCOG00000002450 ENSHCOG00000002440 ENSHCOG00000002432 klf2b (ENSHCOG00000002422) ap1m1 (ENSHCOG00000002410) TPM4 (ENSHCOG00000002392) ##22 rab8a (ENSHCOG00000002361) CIB3 (ENSHCOG00000002327) admp (ENSHCOG00000002301) pnhd (ENSHCOG00000002286) ENSHCOG00000002253 ENSHCOG00000002250 ENSHCOG00000000068 ENSHCOG00000002227 ranbp3b (ENSHCOG00000002201) ENSHCOG00000002174 ptprfb (ENSHCOG00000002165) CDCP2 (ENSHCOG00000002146) tceanc2 (ENSHCOG00000002119) tmem59 (ENSHCOG00000002086) lrrc42 (ENSHCOG00000002076) Percomorphaceae_B ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 Ovalentaria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 Atherinomorphae ANCESTRAL SPECIES 4 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Oryzias ANCESTRAL SPECIES 12 ENSGT00940000153497.E ENSGT00940000161753 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Oryzias_b ANCESTRAL SPECIES 8 ENSGT00940000153497.E ENSGT00940000161753 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Javanese ricefish MODERN SPECIES 8 nadkb (ENSOJAG00000020908) ENSOJAG00000021010 prkci (ENSOJAG00000021119) DAPK3 (ENSOJAG00000021853) sppl2 (ENSOJAG00000021875) arhgef18a (ENSOJAG00000022095) insra (ENSOJAG00000022139) loxl5b (ENSOJAG00000022926) nmrk2 (ENSOJAG00000022950) ATCAY (ENSOJAG00000022959) cplx4c (ENSOJAG00000022961) rx2 (ENSOJAG00000022963) ENSOJAG00000022973 klf2b (ENSOJAG00000022988) ap1m1 (ENSOJAG00000022995) ENSOJAG00000023051 ##22 rab8a (ENSOJAG00000023104) CIB3 (ENSOJAG00000023117) admp (ENSOJAG00000023119) pnhd (ENSOJAG00000009852) ENSOJAG00000009877 ENSOJAG00000009906 ENSOJAG00000009913 ranbp3b (ENSOJAG00000009934) NRTN (ENSOJAG00000010045) ENSOJAG00000010072 ENSOJAG00000016062 ENSOJAG00000016066 CDCP2 (ENSOJAG00000016073) tceanc2 (ENSOJAG00000016076) tmem59 (ENSOJAG00000016084) Indian medaka MODERN SPECIES 35 ENSOMEG00000014955 galnt7 (ENSOMEG00000015072) ddt (ENSOMEG00000014985) hand2 (ENSOMEG00000015101) fbxo8 (ENSOMEG00000015142) cep44 (ENSOMEG00000015176) ENSOMEG00000015270 ENSOMEG00000015333 timm10 (ENSOMEG00000015357) unc93b1 (ENSOMEG00000015402) ENSOMEG00000015455 rtn4rl2a (ENSOMEG00000015468) ENSOMEG00000015485 ENSOMEG00000015514 ENSOMEG00000015543 ENSOMEG00000015556 ##22 ELFN2 (ENSOMEG00000015589) gtpbp1 (ENSOMEG00000015651) lgals2b (ENSOMEG00000015678) ENSOMEG00000015694 ADAP1 (ENSOMEG00000015769) ENSOMEG00000015915 fam83fb (ENSOMEG00000015967) cyth4b (ENSOMEG00000000981) rac2 (ENSOMEG00000016028) ENSOMEG00000016046 ENSOMEG00000016069 CACNG2 (ENSOMEG00000016099) IFT27 (ENSOMEG00000016124) SYNGR1 (ENSOMEG00000016157) TAB1 (ENSOMEG00000016196) Oryzias_a ANCESTRAL SPECIES 7 ENSGT00940000158435 ENSGT00940000153497.E ENSGT00940000153424.a.a.d ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Japanese Medaka HdrR MODERN SPECIES 8 ENSORLG00000017965 sppl2 (ENSORLG00000017969) arhgef18a (ENSORLG00000017973) insra (ENSORLG00000017980) mfsd14a2 (ENSORLG00000017988) ENSORLG00000026342 loxl5b (ENSORLG00000017995) ENSORLG00000018014 nmrk2 (ENSORLG00000017998) ENSORLG00000018000 cplx4c (ENSORLG00000018003) rx2 (ENSORLG00000018007) ENSORLG00000018011 klf2b (ENSORLG00000018015) ap1m1 (ENSORLG00000018017) TPM4 (ENSORLG00000018019) ##22 rab8a (ENSORLG00000018023) CIB3 (ENSORLG00000018025) admp (ENSORLG00000018027) pnhd (ENSORLG00000025552) ENSORLG00000018030 ENSORLG00000018031 ranbp3b (ENSORLG00000018039) NRTN (ENSORLG00000018042) ptprfb (ENSORLG00000018046) ENSORLG00000026851 ENSORLG00000022344 ENSORLG00000025198 CDCP2 (ENSORLG00000024995) tceanc2 (ENSORLG00000027177) tmem59 (ENSORLG00000020673) Chinese medaka MODERN SPECIES 1146 ENSOSIG00000021173 sppl2 (ENSOSIG00000021169) insra (ENSOSIG00000019905) mfsd14a2 (ENSOSIG00000019792) loxl5b (ENSOSIG00000019765) nmrk2 (ENSOSIG00000019762) cplx4c (ENSOSIG00000019760) rx2 (ENSOSIG00000019759) ENSOSIG00000019757 klf2b (ENSOSIG00000019756) TPM4 (ENSOSIG00000019286) ##22 ENSOSIG00000019246 CIB3 (ENSOSIG00000019237) pnhd (ENSOSIG00000019233) ENSOSIG00000019231 ENSOSIG00000019229 ranbp3b (ENSOSIG00000019205) NRTN (ENSOSIG00000019199) ENSOSIG00000019198 ptprfb (ENSOSIG00000018633) Cyprinodontiformes ANCESTRAL SPECIES 5 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00690000103893 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Cyprinodontoidei ANCESTRAL SPECIES 2 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00690000103893 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000163917.a.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000155464.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Poeciliinae ANCESTRAL SPECIES 6 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00690000103893 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000163917.a.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000155464.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Poecilia ANCESTRAL SPECIES 16 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00690000103893 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000163917.a.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000155464.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000177949 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a NAME_6 ANCESTRAL SPECIES 11 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00690000103893 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000163917.a.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000155464.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a Sailfin molly MODERN SPECIES 75 nmrk2 (ENSPLAG00000004333) ATCAY (ENSPLAG00000004369) rx2 (ENSPLAG00000004385) cplx4c (ENSPLAG00000004397) ENSPLAG00000004706 ENSPLAG00000004753 ENSPLAG00000004806 klf2b (ENSPLAG00000004840) ap1m1 (ENSPLAG00000004869) ENSPLAG00000004903 ##22 rab8a (ENSPLAG00000004924) CIB3 (ENSPLAG00000004970) admp (ENSPLAG00000004992) pnhd (ENSPLAG00000005026) ENSPLAG00000005040 ENSPLAG00000005048 ranbp3b (ENSPLAG00000005103) ENSPLAG00000000093 ENSPLAG00000005133 ptprfb (ENSPLAG00000005295) Platyfish MODERN SPECIES 20 arhgef18a (ENSXMAG00000000544) insra (ENSXMAG00000000547) mfsd14a2 (ENSXMAG00000000578) ENSXMAG00000000591 ENSXMAG00000022805 loxl5b (ENSXMAG00000000605) nmrk2 (ENSXMAG00000000613) ATCAY (ENSXMAG00000000615) rx2 (ENSXMAG00000021214) cplx4c (ENSXMAG00000020858) ENSXMAG00000026318 ENSXMAG00000026007 ENSXMAG00000000632 klf2b (ENSXMAG00000000640) ap1m1 (ENSXMAG00000000642) TPM4 (ENSXMAG00000000647) ##22 rab8a (ENSXMAG00000029254) CIB3 (ENSXMAG00000000665) admp (ENSXMAG00000000671) pnhd (ENSXMAG00000000672) ENSXMAG00000000673 ENSXMAG00000000675 ranbp3b (ENSXMAG00000000676) ENSXMAG00000029678 ENSXMAG00000000684 ENSXMAG00000025734 ptprfb (ENSXMAG00000000386) ENSXMAG00000027854 ENSXMAG00000026832 CDCP2 (ENSXMAG00000000451) tceanc2 (ENSXMAG00000000457) NAME_4 ANCESTRAL SPECIES 111 ENSGT00940000161753 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000163917.a.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000155464.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Sheepshead minnow MODERN SPECIES 249 ENSCVAG00000011766 klf2b (ENSCVAG00000011775) ap1m1 (ENSCVAG00000011839) TPM4 (ENSCVAG00000011898) ##22 rab8a (ENSCVAG00000011935) CIB3 (ENSCVAG00000011954) admp (ENSCVAG00000012012) pnhd (ENSCVAG00000012025) ENSCVAG00000012040 ENSCVAG00000012061 ranbp3b (ENSCVAG00000012090) ENSCVAG00000012111 ENSCVAG00000012145 ptprfb (ENSCVAG00000012259) CDCP2 (ENSCVAG00000012294) tceanc2 (ENSCVAG00000012312) tmem59 (ENSCVAG00000012332) lrrc42 (ENSCVAG00000012344) yipf1 (ENSCVAG00000012362) Mummichog MODERN SPECIES 2265 arhgef18a (ENSFHEG00000009303) insra (ENSFHEG00000009349) mfsd14a2 (ENSFHEG00000009389) ENSFHEG00000009535 loxl5b (ENSFHEG00000009571) nmrk2 (ENSFHEG00000009578) ATCAY (ENSFHEG00000009585) rx2 (ENSFHEG00000009601) cplx4c (ENSFHEG00000000222) ENSFHEG00000009905 ENSFHEG00000009974 ENSFHEG00000009995 ENSFHEG00000010027 klf2b (ENSFHEG00000010037) ap1m1 (ENSFHEG00000010097) TPM4 (ENSFHEG00000010127) ##22 rab8a (ENSFHEG00000010167) CIB3 (ENSFHEG00000010181) admp (ENSFHEG00000010200) pnhd (ENSFHEG00000010238) ENSFHEG00000010267 ENSFHEG00000010294 ranbp3b (ENSFHEG00000010376) ENSFHEG00000010402 ENSFHEG00000010409 ptprfb (ENSFHEG00000010682) ENSFHEG00000010714 CDCP2 (ENSFHEG00000010737) tceanc2 (ENSFHEG00000010748) tmem59 (ENSFHEG00000010763) lrrc42 (ENSFHEG00000010769) Percomorphaceae_C ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 Eupercaria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 Tetraodontidae ANCESTRAL SPECIES 37 ENSGT00940000153497.E ENSGT00940000162952.d.b.b ENSGT00940000161753 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000169355.b ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000155464.b ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Tetraodon MODERN SPECIES 7 prkci (ENSTNIG00000014911) ENSTNIG00000014910 DAPK3 (ENSTNIG00000014909) sppl2 (ENSTNIG00000014907) sppl2 (ENSTNIG00000014908) arhgef18a (ENSTNIG00000014906) insra (ENSTNIG00000014905) mfsd14a2 (ENSTNIG00000014904) ENSTNIG00000014903 loxl5b (ENSTNIG00000014902) rx2 (ENSTNIG00000014901) ENSTNIG00000014900 ENSTNIG00000014899 ENSTNIG00000014898 ENSTNIG00000014897 ENSTNIG00000014896 ##22 rab8a (ENSTNIG00000014895) CIB3 (ENSTNIG00000014894) ENSTNIG00000014893 admp (ENSTNIG00000014892) pnhd (ENSTNIG00000014891) ENSTNIG00000014890 ranbp3b (ENSTNIG00000014889) NRTN (ENSTNIG00000014888) ptprfb (ENSTNIG00000014887) CDCP2 (ENSTNIG00000014886) ENSTNIG00000014885 tmem59 (ENSTNIG00000014884) lrrc42 (ENSTNIG00000014883) ENSTNIG00000000812 zgc:113691 (ENSTNIG00000014882) Fugu MODERN SPECIES 14 DAPK3 (ENSTRUG00000006459) sppl2 (ENSTRUG00000006665) arhgef18a (ENSTRUG00000007257) ENSTRUG00000007483 insra (ENSTRUG00000007600) mfsd14a2 (ENSTRUG00000008341) ENSTRUG00000030471 loxl5b (ENSTRUG00000009159) nmrk2 (ENSTRUG00000009269) ATCAY (ENSTRUG00000009394) rx2 (ENSTRUG00000009519) ENSTRUG00000009578 ENSTRUG00000009788 ENSTRUG00000023012 ap1m1 (ENSTRUG00000010097) TPM4 (ENSTRUG00000010332) ##22 rab8a (ENSTRUG00000025256) CIB3 (ENSTRUG00000010744) ENSTRUG00000031561 admp (ENSTRUG00000011210) pnhd (ENSTRUG00000011281) ENSTRUG00000011305 ENSTRUG00000021512 ranbp3b (ENSTRUG00000011329) NRTN (ENSTRUG00000032797) ptprfb (ENSTRUG00000021870) CDCP2 (ENSTRUG00000011688) tceanc2 (ENSTRUG00000030275) tmem59 (ENSTRUG00000011748) lrrc42 (ENSTRUG00000025122) yipf1 (ENSTRUG00000011872) Eupecaria_A ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 Ballan wrasse MODERN SPECIES 1 ENSLBEG00000017890 exoc3 (ENSLBEG00000017815) dnajb6a (ENSLBEG00000017775) ENSLBEG00000017755 mfsd14a2 (ENSLBEG00000017705) ENSLBEG00000017617 loxl5b (ENSLBEG00000017563) nmrk2 (ENSLBEG00000017551) ATCAY (ENSLBEG00000017524) rx2 (ENSLBEG00000017513) DNAH8 (ENSLBEG00000017300) ENSLBEG00000017234 ENSLBEG00000016982 ENSLBEG00000017196 ap1m1 (ENSLBEG00000016846) TPM4 (ENSLBEG00000016792) ##22 rab8a (ENSLBEG00000016748) CIB3 (ENSLBEG00000016727) admp (ENSLBEG00000016703) pnhd (ENSLBEG00000016641) ENSLBEG00000016621 ENSLBEG00000016608 ranbp3b (ENSLBEG00000016536) NRTN (ENSLBEG00000016504) ENSLBEG00000016460 ptprfb (ENSLBEG00000016097) ENSLBEG00000015917 CDCP2 (ENSLBEG00000015893) tceanc2 (ENSLBEG00000015871) tmem59 (ENSLBEG00000015848) lrrc42 (ENSLBEG00000015820) Percomorphaceae_D ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 Carangaria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 Pleuronectoidei ANCESTRAL SPECIES 1 ENSGT00940000161753 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a ENSGT00520000060044 Tongue sole MODERN SPECIES 12 ENSCSEG00000014457 sppl2 (ENSCSEG00000014469) arhgef18a (ENSCSEG00000014485) insra (ENSCSEG00000014505) mfsd14a2 (ENSCSEG00000014520) ENSCSEG00000014556 loxl5b (ENSCSEG00000015516) nmrk2 (ENSCSEG00000015523) ATCAY (ENSCSEG00000015532) ENSCSEG00000015562 rx2 (ENSCSEG00000015566) ENSCSEG00000015580 ENSCSEG00000015603 klf2b (ENSCSEG00000015625) ap1m1 (ENSCSEG00000015635) TPM4 (ENSCSEG00000015696) ##22 rab8a (ENSCSEG00000015716) ENSCSEG00000015760 CIB3 (ENSCSEG00000015836) admp (ENSCSEG00000015845) pnhd (ENSCSEG00000015870) ENSCSEG00000015875 ranbp3b (ENSCSEG00000015885) NRTN (ENSCSEG00000015897) ptprfb (ENSCSEG00000015922) ENSCSEG00000016049 ENSCSEG00000016062 tceanc2 (ENSCSEG00000016065) CDCP2 (ENSCSEG00000016073) tmem59 (ENSCSEG00000016074) yipf1 (ENSCSEG00000016081) Cod MODERN SPECIES 21 arhgef18a (ENSGMOG00000012527) insra (ENSGMOG00000012522) mfsd14a2 (ENSGMOG00000012521) ENSGMOG00000012516 ENSGMOG00000032554 loxl5b (ENSGMOG00000012514) nmrk2 (ENSGMOG00000012513) ENSGMOG00000012512 ENSGMOG00000032331 rx2 (ENSGMOG00000012510) ENSGMOG00000012507 ENSGMOG00000012502 klf2b (ENSGMOG00000036462) ap1m1 (ENSGMOG00000012498) ENSGMOG00000012494 TPM4 (ENSGMOG00000012492) ##22 rab8a (ENSGMOG00000012489) CIB3 (ENSGMOG00000012487) admp (ENSGMOG00000012485) pnhd (ENSGMOG00000012482) ENSGMOG00000023427 ENSGMOG00000033525 ranbp3b (ENSGMOG00000012476) ENSGMOG00000034364 ENSGMOG00000012471 ENSGMOG00000026053 ENSGMOG00000024625 ENSGMOG00000033088 CDCP2 (ENSGMOG00000012470) TCEANC2 (ENSGMOG00000012467) tmem59 (ENSGMOG00000012465) Clupeocephala ANCESTRAL SPECIES 391 ENSGT01090000261062 ENSGT00940000155916 ENSGT00940000165061 ENSGT00940000166556 ENSGT00940000157178.h ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000018044.b.b ENSGT00390000001201 ENSGT00390000013811 Euteleosteomorpha ANCESTRAL SPECIES 111 ENSGT01090000261062 ENSGT00940000155916 ENSGT00940000165061 ENSGT00940000166556 ENSGT00940000157178.h ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000018044.b.b ENSGT00390000001201 ENSGT00390000013811 ENSGT00390000002877 ENSGT00940000159972 ENSGT01030000235192 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00390000005338 ENSGT00940000169448 ENSGT00950000182993.A.a.i ENSGT00390000012434 Protacanthopterygii ANCESTRAL SPECIES 13 ENSGT00940000163917.a.a ENSGT00730000111147 ENSGT00390000002505 ENSGT00950000182915.b.b.a.b.c.a ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00940000157924 ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000165061 ENSGT00940000166556 ENSGT00940000157178.h ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT01030000235192 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00390000005338 ENSGT00940000158588 ENSGT00950000182993.A.a.i ENSGT00390000012434 ENSGT00390000007212 ENSGT00940000165636.d Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 30 ENSGT00940000160775.h ENSGT00940000163917.a.a.b ENSGT00730000111147.l ENSGT00390000002505 ENSGT00950000182915.b.b.a.b.c.a.b ENSGT00390000012078.a.a.d ENSGT00940000155438.b.v ENSGT00940000164495.c.b.d ENSGT00940000157924.h ENSGT00390000013811.tb ENSGT00390000001201.i ENSGT00940000155916.r ENSGT00940000165061 ENSGT00940000166556.b ENSGT00940000157178.h.g ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.a ##22 ENSGT00950000182891.a.a.b.a.a.d ENSGT00940000157246.b.b ENSGT00390000002877.h ENSGT00940000159972.i.a ENSGT01030000235192.c ENSGT00940000160888.c ENSGT00940000165287.a.b ENSGT00900000141362.a.b.a ENSGT00390000005338.b ENSGT00940000169448 ENSGT00940000176016 ENSGT00940000158588.d.a.a ENSGT00950000182993.A.a.i.d ENSGT00390000012434.b ENSGT00390000007212.c Salmoninae_a ANCESTRAL SPECIES 1 ENSGT00940000160775.h ENSGT00940000163917.a.a.b ENSGT00730000111147.l ENSGT00390000002505 ENSGT00950000182915.b.b.a.b.c.a.b ENSGT00390000012078.a.a.d ENSGT00940000155438.b.v ENSGT00940000164495.c.b.d ENSGT00940000157924.h ENSGT00390000013811.tb ENSGT00390000001201.i ENSGT00940000155916.r ENSGT00940000165061 ENSGT00940000166556.b ENSGT00940000157178.h.g ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.a ##22 ENSGT00950000182891.a.a.b.a.a.d ENSGT00940000157246.b.b ENSGT00390000002877.h ENSGT00940000159972.i.a ENSGT01030000235192.c ENSGT00940000160888.c ENSGT00940000165287.a.b ENSGT00900000141362.a.b.a ENSGT00390000005338.b ENSGT00940000169448 ENSGT00940000176016 ENSGT00940000158588.d.a.a ENSGT00950000182993.A.a.i.d ENSGT00390000012434.b ENSGT00390000007212.c Oncorhynchus ANCESTRAL SPECIES 2 ENSGT00940000160775.h ENSGT00940000163917.a.a.b ENSGT00730000111147.l ENSGT00390000002505 ENSGT00950000182915.b.b.a.b.c.a.b ENSGT00390000012078.a.a.d ENSGT00940000155438.b.v ENSGT00940000164495.c.b.d ENSGT00940000157924.h ENSGT00390000013811.tb ENSGT00390000001201.i ENSGT00940000155916.r ENSGT00940000165061 ENSGT00940000166556.b ENSGT00940000157178.h.g ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.a ##22 ENSGT00950000182891.a.a.b.a.a.d ENSGT00940000157246.b.b ENSGT00390000002877.h ENSGT00940000159972.i.a ENSGT01030000235192.c ENSGT00940000160888.c ENSGT00940000165287.a.b ENSGT00900000141362.a.b.a ENSGT00390000005338.b ENSGT00940000169448 ENSGT00940000176016 ENSGT00940000158588.d.a.a ENSGT00950000182993.A.a.i.d ENSGT00390000012434.b ENSGT00390000007212.c Oncorhynchus_a ANCESTRAL SPECIES 1 ENSGT00940000160775.h ENSGT00940000163917.a.a.b ENSGT00730000111147.l ENSGT00390000002505 ENSGT00950000182915.b.b.a.b.c.a.b ENSGT00390000012078.a.a.d ENSGT00940000155438.b.v ENSGT00940000164495.c.b.d ENSGT00940000157924.h ENSGT00390000013811.tb ENSGT00390000001201.i ENSGT00940000155916.r ENSGT00940000165061 ENSGT00940000166556.b ENSGT00940000157178.h.g ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.a ##22 ENSGT00950000182891.a.a.b.a.a.d ENSGT00940000157246.b.b ENSGT00390000002877.h ENSGT00940000159972.i.a ENSGT01030000235192.c ENSGT00940000160888.c ENSGT00940000165287.a.b ENSGT00900000141362.a.b.a ENSGT00390000005338.b ENSGT00940000169448 ENSGT00940000176016 ENSGT00940000158588.d.a.a ENSGT00950000182993.A.a.i.d ENSGT00390000012434.b ENSGT00390000007212.c Chinook salmon MODERN SPECIES 30 ATCAY (ENSOTSG00005030286) MATK (ENSOTSG00005030480) rx1 (ENSOTSG00005031371) cherp (ENSOTSG00005031377) C19orf44 (ENSOTSG00005031768) ENSOTSG00005031769 rad23ab (ENSOTSG00005031774) EPS15L1 (ENSOTSG00005031777) klf2a (ENSOTSG00005031833) ap1m1 (ENSOTSG00005031837) mrpl54 (ENSOTSG00005031900) safb (ENSOTSG00005031902) ENSOTSG00005031903 ENSOTSG00005031906 lpl (ENSOTSG00005031948) tpm4a (ENSOTSG00005033460) ##22 ENSOTSG00005033462 RAB8A (ENSOTSG00005033463) tax1bp3 (ENSOTSG00005033466) slc1a6 (ENSOTSG00005033467) ccl44 (ENSOTSG00005033525) pole4 (ENSOTSG00005033526) ENSOTSG00005033527 ccl25b (ENSOTSG00005033528) ctns (ENSOTSG00005033532) ENSOTSG00005033534 RANBP3 (ENSOTSG00005033535) ENSOTSG00005033536 ndufa11 (ENSOTSG00005033537) VMAC (ENSOTSG00005033538) larp6b (ENSOTSG00005033539) Coho salmon MODERN SPECIES 24 ENSOKIG00005000918 rx1 (ENSOKIG00005000923) cherp (ENSOKIG00005000941) C19orf44 (ENSOKIG00005000965) ENSOKIG00005000977 rad23ab (ENSOKIG00005000990) EPS15L1 (ENSOKIG00005001028) klf2a (ENSOKIG00005001067) AP1M1 (ENSOKIG00005001094) fam32a (ENSOKIG00005001137) mrpl54 (ENSOKIG00005001145) safb (ENSOKIG00005001162) ENSOKIG00005001169 ENSOKIG00005001175 lpl (ENSOKIG00005001204) tpm4a (ENSOKIG00005001237) ##22 ENSOKIG00005001253 RAB8A (ENSOKIG00005001265) tax1bp3 (ENSOKIG00005001274) slc1a6 (ENSOKIG00005001321) ccl44 (ENSOKIG00005001440) pole4 (ENSOKIG00005001447) ENSOKIG00005001454 ccl25b (ENSOKIG00005001459) ctns (ENSOKIG00005001466) ENSOKIG00005001474 RANBP3 (ENSOKIG00005001478) ENSOKIG00005001482 ndufa11 (ENSOKIG00005001489) VMAC (ENSOKIG00005001491) larp6b (ENSOKIG00005001496) Rainbow trout MODERN SPECIES rx1 (ENSOMYG00000022422) cherp (ENSOMYG00000022514) ENSOMYG00000022952 calr3a (ENSOMYG00000023017) rad23ab (ENSOMYG00000023129) EPS15L1 (ENSOMYG00000023293) klf2a (ENSOMYG00000023459) AP1M1 (ENSOMYG00000023577) mrpl54 (ENSOMYG00000023632) safb (ENSOMYG00000000088) ENSOMYG00000000132 ENSOMYG00000074599 ENSOMYG00000000174 ENSOMYG00000072892 lpl (ENSOMYG00000000721) tpm4a (ENSOMYG00000000926) ##22 RS27 (ENSOMYG00000000946) ENSOMYG00000000956 tax1bp3 (ENSOMYG00000000971) slc1a6 (ENSOMYG00000001100) pole4 (ENSOMYG00000001207) ENSOMYG00000001253 ccl25b (ENSOMYG00000056584) ctns (ENSOMYG00000001351) ENSOMYG00000001372 ENSOMYG00000070591 ndufa11 (ENSOMYG00000001434) ENSOMYG00000001492 ENSOMYG00000001534 ENSOMYG00000001559 ENSOMYG00000001586 Salmo ANCESTRAL SPECIES 9 ENSGT00940000160775.h ENSGT00940000163917.a.a.b ENSGT00730000111147.l ENSGT00390000002505 ENSGT00950000182915.b.b.a.b.c.a.b ENSGT00390000012078.a.a.d ENSGT00940000155438.b.v ENSGT00940000164495.c.b.d ENSGT00940000157924.h ENSGT00390000013811.tb ENSGT00390000001201.i ENSGT00940000155916.r ENSGT00940000165061 ENSGT00940000166556.b ENSGT00940000157178.h.g ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.a ##22 ENSGT00950000182891.a.a.b.a.a.d ENSGT00940000157246.b.b ENSGT00390000002877.h ENSGT00940000159972.i.a ENSGT01030000235192.c ENSGT00940000160888.c ENSGT00940000165287.a.b ENSGT00900000141362.a.b.a ENSGT00390000005338.b ENSGT00940000176016 ENSGT00990000211766 ENSGT00950000182993.A.a.i.d ENSGT00390000012434.b ENSGT00390000007212.c ENSGT00940000165636.d River trout MODERN SPECIES 8 rx1 (ENSSTUG00000003495) cherp (ENSSTUG00000003510) C19orf44 (ENSSTUG00000003605) ENSSTUG00000003621 rad23ab (ENSSTUG00000003687) EPS15L1 (ENSSTUG00000003770) klf2a (ENSSTUG00000003873) ap1m1 (ENSSTUG00000003957) fam32a (ENSSTUG00000004213) mrpl54 (ENSSTUG00000004227) safb (ENSSTUG00000004287) ENSSTUG00000004346 ENSSTUG00000004452 ENSSTUG00000004495 lpl (ENSSTUG00000004564) tpm4a (ENSSTUG00000006518) ##22 ENSSTUG00000006611 RAB8A (ENSSTUG00000006633) tax1bp3 (ENSSTUG00000006703) slc1a6 (ENSSTUG00000006742) ccl44 (ENSSTUG00000007154) pole4 (ENSSTUG00000007176) ENSSTUG00000007187 ccl25b (ENSSTUG00000007198) ctns (ENSSTUG00000007214) ENSSTUG00000007232 ENSSTUG00000007256 ndufa11 (ENSSTUG00000007259) VMAC (ENSSTUG00000007267) larp6b (ENSSTUG00000007274) timm13 (ENSSTUG00000007289) Atlantic salmon MODERN SPECIES 7 MATK (ENSSSAG00000002734) rx1 (ENSSSAG00000122270) cherp (ENSSSAG00000073228) ENSSSAG00000095797 ENSSSAG00000073163 EPS15L1 (ENSSSAG00000072805) ENSSSAG00000091652 KLF2 (ENSSSAG00000072786) AP1M1 (ENSSSAG00000072743) fam32a (ENSSSAG00000072739) mrpl54 (ENSSSAG00000072734) safb (ENSSSAG00000072727) ENSSSAG00000072035 ENSSSAG00000072710 lpl (ENSSSAG00000072070) tpm4a (ENSSSAG00000105130) ##22 RS27 (ENSSSAG00000071862) ENSSSAG00000108183 ENSSSAG00000083822 tax1bp3 (ENSSSAG00000093397) slc1a6 (ENSSSAG00000071254) ccl44 (ENSSSAG00000071229) pole4 (ENSSSAG00000071222) ENSSSAG00000109131 ccl25b (ENSSSAG00000071212) ctns (ENSSSAG00000071207) ENSSSAG00000071203 ENSSSAG00000110552 ENSSSAG00000071179 ENSSSAG00000115635 ENSSSAG00000071162 Huchen MODERN SPECIES 1692 ap1m1 (ENSHHUG00000052275) fam32a (ENSHHUG00000052282) mrpl54 (ENSHHUG00000052287) safb (ENSHHUG00000052291) ENSHHUG00000052298 ENSHHUG00000052303 lpl (ENSHHUG00000052308) tpm4a (ENSHHUG00000052569) ##22 ENSHHUG00000052632 ENSHHUG00000052633 Salmoninae ANCESTRAL SPECIES 11 ENSGT00940000166556.a ENSGT00940000157178.h.h ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000164336 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.b ##22 ENSGT00950000182891.a.a.b.a.a.c ENSGT00940000157246.b.a ENSGT00940000161678.eb ENSGT00390000002877.g ENSGT00940000159972.i.b ENSGT01030000235192.d ENSGT00940000160888.d ENSGT00900000141362.a.b.b ENSGT00390000005338.a ENSGT00940000158588.d.a.b ENSGT00950000182993.A.a.i.c ENSGT00390000012434.a ENSGT00390000007212.d ENSGT00390000014000.c ENSGT00990000208947 Huchen MODERN SPECIES 835 ENSHHUG00000040380 tpm4a (ENSHHUG00000040390) ##22 ENSHHUG00000040862 RAB8A (ENSHHUG00000040923) hsh2d (ENSHHUG00000040991) tax1bp3 (ENSHHUG00000040992) slc1a6 (ENSHHUG00000040994) ENSHHUG00000041061 ccl25b (ENSHHUG00000041080) ctns (ENSHHUG00000041082) RANBP3 (ENSHHUG00000041095) ENSHHUG00000041101 ENSHHUG00000041110 ENSHHUG00000041115 ndufa11 (ENSHHUG00000041135) VMAC (ENSHHUG00000041140) timm13 (ENSHHUG00000041142) Salmoninae_a ANCESTRAL SPECIES 22 ENSGT00940000162148.s.a ENSGT00940000160775.g ENSGT00940000163917.a.a.a ENSGT00730000111147.k ENSGT00950000182915.b.b.a.b.c.a.a ENSGT00390000012078.a.a.c ENSGT00940000155438.b.u ENSGT00940000164495.c.b.c ENSGT00940000157924.g ENSGT00390000013811.sb ENSGT00390000001201.j ENSGT00390000018044.b.b ENSGT00940000155916.q ENSGT00940000166556.a ENSGT00940000157178.h.h ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.b ##22 ENSGT00950000182891.a.a.b.a.a.c ENSGT00940000157246.b.a ENSGT00940000161678.eb ENSGT00390000002877.g ENSGT00940000159972.i.b ENSGT01030000235192.d ENSGT00940000160888.d ENSGT00900000141362.a.b.b ENSGT00390000005338.a ENSGT00940000158588.d.a.b ENSGT00950000182993.A.a.i.c ENSGT00390000012434.a ENSGT00390000007212.d ENSGT00390000014000.c ENSGT00990000208947 Salmo ANCESTRAL SPECIES 14 ENSGT00940000162148.s.a ENSGT00940000160775.g ENSGT00940000163917.a.a.a ENSGT00730000111147.k ENSGT00950000182915.b.b.a.b.c.a.a ENSGT00390000012078.a.a.c ENSGT00940000155438.b.u ENSGT00940000164495.c.b.c ENSGT00940000157924.g ENSGT00390000013811.sb ENSGT00390000001201.j ENSGT00390000018044.b.b ENSGT00940000155916.q ENSGT00940000166556.a ENSGT00940000157178.h.h ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.b ##22 ENSGT00940000164336 ENSGT00940000157246.b.a ENSGT00940000161678.eb ENSGT00390000002877.g ENSGT00940000159972.i.b ENSGT01030000235192.d ENSGT00940000160888.d ENSGT00990000212527 ENSGT00900000141362.a.b.b ENSGT00390000005338.a ENSGT00940000158588.d.a.b ENSGT00950000182993.A.a.i.c ENSGT00390000012434.a ENSGT00390000007212.d ENSGT00390000014000.c Atlantic salmon MODERN SPECIES 1 ENSSSAG00000002710 MATK (ENSSSAG00000073285) rx1 (ENSSSAG00000002891) cherp (ENSSSAG00000002956) ENSSSAG00000003242 ENSSSAG00000003307 EPS15L1 (ENSSSAG00000003523) ENSSSAG00000006501 AP1M1 (ENSSSAG00000006530) fam32a (ENSSSAG00000006593) ENSSSAG00000006607 mrpl54 (ENSSSAG00000006629) safb (ENSSSAG00000006642) ENSSSAG00000006662 lpl (ENSSSAG00000006748) tpm4 (ENSSSAG00000006864) ##22 ENSSSAG00000007160 hsh2d (ENSSSAG00000007170) tax1bp3 (ENSSSAG00000095414) ENSSSAG00000007183 ccl44 (ENSSSAG00000007216) ENSSSAG00000116706 ENSSSAG00000007224 ENSSSAG00000007228 ctns (ENSSSAG00000007234) ranb3 (ENSSSAG00000007242) ENSSSAG00000071191 nduab (ENSSSAG00000007249) ENSSSAG00000007254 TIM13 (ENSSSAG00000007258) ENSSSAG00000007264 River trout MODERN SPECIES 14 MATK (ENSSTUG00000015672) rx1 (ENSSTUG00000015791) cherp (ENSSTUG00000015809) ENSSTUG00000015879 ENSSTUG00000030502 EPS15L1 (ENSSTUG00000030596) klf2a (ENSSTUG00000030747) ap1m1 (ENSSTUG00000030757) fam32a (ENSSTUG00000030806) ENSSTUG00000030812 mrpl54 (ENSSTUG00000030816) malt2 (ENSSTUG00000030829) safb (ENSSTUG00000030862) ENSSTUG00000030878 lpl (ENSSTUG00000030981) tpm4a (ENSSTUG00000032684) ##22 ENSSTUG00000032751 RAB8A (ENSSTUG00000032783) hsh2d (ENSSTUG00000032804) tax1bp3 (ENSSTUG00000032815) slc1a6 (ENSSTUG00000032850) ccl44 (ENSSTUG00000033916) pole4 (ENSSTUG00000033925) ENSSTUG00000033934 ccl25b (ENSSTUG00000033940) ctns (ENSSTUG00000033944) RANBP3 (ENSSTUG00000034008) ENSSTUG00000034047 ndufa11 (ENSSTUG00000034053) VMAC (ENSSTUG00000034061) timm13 (ENSSTUG00000034066) Oncorhynchus ANCESTRAL SPECIES 8 ENSGT00940000162148.s.a ENSGT00940000160775.g ENSGT00940000163917.a.a.a ENSGT00730000111147.k ENSGT00950000182915.b.b.a.b.c.a.a ENSGT00390000012078.a.a.c ENSGT00940000155438.b.u ENSGT00940000164495.c.b.c ENSGT00940000157924.g ENSGT00390000013811.sb ENSGT00390000001201.j ENSGT00390000018044.b.b ENSGT00940000155916.q ENSGT00940000166556.a ENSGT00940000157178.h.h ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.b ##22 ENSGT00950000182891.a.a.b.a.a.c ENSGT00940000157246.b.a ENSGT00940000161678.eb ENSGT00390000002877.g ENSGT00940000159972.i.b ENSGT01030000235192.d ENSGT00940000160888.d ENSGT00900000141362.a.b.b ENSGT00390000005338.a ENSGT00940000158588.d.a.b ENSGT00950000182993.A.a.i.c ENSGT00390000012434.a ENSGT00390000007212.d ENSGT00390000014000.c ENSGT01030000234515.a.b.b.a.c Rainbow trout MODERN SPECIES 26 rx1 (ENSOMYG00000006180) cherp (ENSOMYG00000006525) ENSOMYG00000006796 EPS15L1 (ENSOMYG00000007267) ENSOMYG00000007454 ENSOMYG00000074095 AP1M1 (ENSOMYG00000007657) ENSOMYG00000064824 fam32a (ENSOMYG00000007716) ENSOMYG00000007816 malt2 (ENSOMYG00000007790) safb (ENSOMYG00000007913) ENSOMYG00000019710 ENSOMYG00000007948 lpl (ENSOMYG00000008496) tpm4a (ENSOMYG00000009100) ##22 RS27 (ENSOMYG00000009015) ENSOMYG00000009242 hsh2d (ENSOMYG00000009280) tax1bp3 (ENSOMYG00000009299) slc1a6 (ENSOMYG00000009337) ccl44 (ENSOMYG00000052538) pole4 (ENSOMYG00000009390) ccl25b (ENSOMYG00000009409) ENSOMYG00000050369 ctns (ENSOMYG00000067836) ENSOMYG00000009517 ENSOMYG00000050465 ENSOMYG00000061253 ndufa11 (ENSOMYG00000009588) ENSOMYG00000009602 Oncorhynchus_a ANCESTRAL SPECIES 14 ENSGT00940000162148.s.a ENSGT00940000160775.g ENSGT00940000163917.a.a.a ENSGT00730000111147.k ENSGT00950000182915.b.b.a.b.c.a.a ENSGT00390000012078.a.a.c ENSGT00940000155438.b.u ENSGT00940000164495.c.b.c ENSGT00940000157924.g ENSGT00390000013811.sb ENSGT00390000001201.j ENSGT00390000018044.b.b ENSGT00940000155916.q ENSGT00940000166556.a ENSGT00940000157178.h.h ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.b ##22 ENSGT00950000182891.a.a.b.a.a.c ENSGT00940000157246.b.a ENSGT00940000161678.eb ENSGT00390000002877.g ENSGT00940000159972.i.b ENSGT00940000160888.d ENSGT00900000141362.a.b.b ENSGT00940000158588.d.a.b ENSGT00950000182993.A.a.i.c ENSGT00390000012434.a ENSGT00390000007212.d ENSGT00390000014000.c ENSGT01030000234515.a.b.b.a.c ENSGT00950000183158.A.e.a ENSGT00940000154412.C.d.a Chinook salmon MODERN SPECIES 29 ATCAY (ENSOTSG00005030806) MATK (ENSOTSG00005030807) rx1 (ENSOTSG00005030808) cherp (ENSOTSG00005030809) ENSOTSG00005030838 EPS15L1 (ENSOTSG00005030850) klf2a (ENSOTSG00005030877) ENSOTSG00005030878 ap1m1 (ENSOTSG00005030882) fam32a (ENSOTSG00005030904) malt2 (ENSOTSG00005030906) mrpl54 (ENSOTSG00005030951) safb (ENSOTSG00005030954) ENSOTSG00005030956 lpl (ENSOTSG00005031029) tpm4a (ENSOTSG00005032766) ##22 ENSOTSG00005033045 RAB8A (ENSOTSG00005033046) hsh2d (ENSOTSG00005033048) tax1bp3 (ENSOTSG00005033049) slc1a6 (ENSOTSG00005033052) ENSOTSG00005033836 ccl25b (ENSOTSG00005033838) RANBP3 (ENSOTSG00005033844) ENSOTSG00005033847 ndufa11 (ENSOTSG00005033848) VMAC (ENSOTSG00005033849) timm13 (ENSOTSG00005033851) cers4a (ENSOTSG00005033853) fbn2b (ENSOTSG00005033873) timm44 (ENSOTSG00005034744) Acanthomorphata ANCESTRAL SPECIES 11 ENSGT01030000234519.e.a.a.b.a.a.b.b ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Cod MODERN SPECIES 3 gna11a (ENSGMOG00000014618) gna15.4 (ENSGMOG00000027565) ENSGMOG00000023519 cdc34a (ENSGMOG00000014584) ap3d1 (ENSGMOG00000014540) ENSGMOG00000031063 ENSGMOG00000023856 ENSGMOG00000032109 fam32a (ENSGMOG00000025983) mrpl54 (ENSGMOG00000023882) malt2 (ENSGMOG00000014328) safb (ENSGMOG00000014280) lpl (ENSGMOG00000014259) ENSGMOG00000014235 ENSGMOG00000003548 TPM4 (ENSGMOG00000028430) ##22 ENSGMOG00000006743 ENSGMOG00000033184 tax1bp3 (ENSGMOG00000006733) slc1a6 (ENSGMOG00000006717) ENSGMOG00000006706 pole4 (ENSGMOG00000006699) ENSGMOG00000034708 ccl25b (ENSGMOG00000006683) gclm (ENSGMOG00000006675) dnttip2 (ENSGMOG00000024221) ENSGMOG00000033349 ENSGMOG00000030429 AGBL4 (ENSGMOG00000006585) bend5 (ENSGMOG00000006572) ENSGMOG00000031514 Euacanthomorphacea ANCESTRAL SPECIES 9 ENSGT01030000234519.e.a.a.b.a.a.b.b ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Pinecone sodierfish MODERN SPECIES 18 ENSMMDG00005012279 ENSMMDG00005012281 gna11a (ENSMMDG00005012287) gna15.4 (ENSMMDG00005012378) C2CD4C (ENSMMDG00005012384) cdc34a (ENSMMDG00005012387) ap3d1 (ENSMMDG00005012396) hdgfl2 (ENSMMDG00005012445) fam32a (ENSMMDG00005012453) mrpl54 (ENSMMDG00005012456) malt2 (ENSMMDG00005012465) safb (ENSMMDG00005012474) lpl (ENSMMDG00005012484) ENSMMDG00005012750 ENSMMDG00005012786 tpm4a (ENSMMDG00005013641) ##22 ENSMMDG00005013811 RAB8A (ENSMMDG00005000102) hsh2d (ENSMMDG00005000106) tax1bp3 (ENSMMDG00005000109) slc1a6 (ENSMMDG00005000115) ENSMMDG00005000124 pole4 (ENSMMDG00005000126) ENSMMDG00005000136 ccl25b (ENSMMDG00005000148) gclm (ENSMMDG00005000164) dnttip2 (ENSMMDG00005000183) ENSMMDG00005000191 AGBL4 (ENSMMDG00005000207) ENSMMDG00005000216 bend5 (ENSMMDG00005000231) Percomorphaceae ANCESTRAL SPECIES 12 ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT01090000261062 ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Tiger tail seahorse MODERN SPECIES 469 midn (ENSHCOG00000001630) si:ch211-212d10.2 (ENSHCOG00000001635) CILP2 (ENSHCOG00000001645) yjefn3 (ENSHCOG00000001651) gatad2ab (ENSHCOG00000001653) MAU2 (ENSHCOG00000001663) slc25a42 (ENSHCOG00000001672) tmem161a (ENSHCOG00000001679) malt2 (ENSHCOG00000001692) ENSHCOG00000001697 safb (ENSHCOG00000001705) lpl (ENSHCOG00000001712) lpl (ENSHCOG00000002080) ENSHCOG00000002188 ENSHCOG00000002200 tpm4a (ENSHCOG00000002238) ##22 ENSHCOG00000002252 RAB8A (ENSHCOG00000002268) ENSHCOG00000002278 tax1bp3 (ENSHCOG00000002283) slc1a6 (ENSHCOG00000002308) ENSHCOG00000002330 ENSHCOG00000002337 ENSHCOG00000002341 ENSHCOG00000002343 ENSHCOG00000002393 ccl25b (ENSHCOG00000002409) gclm (ENSHCOG00000002431) ENSHCOG00000002441 ENSHCOG00000002446 ENSHCOG00000002452 Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000167938 ENSGT00940000164336 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a Ovalentaria ANCESTRAL SPECIES 9 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000167938 ENSGT00940000164336 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a Ovalentaria_B ANCESTRAL SPECIES 8 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000164336 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 Pomacentridae ANCESTRAL SPECIES 14 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Bicolor damselfish MODERN SPECIES 1054 fam32a (ENSSPAG00000015595) mrpl54 (ENSSPAG00000015601) malt2 (ENSSPAG00000015617) safb (ENSSPAG00000015682) lpl (ENSSPAG00000015777) ENSSPAG00000015807 ENSSPAG00000015823 tpm4a (ENSSPAG00000015856) ##22 ENSSPAG00000015966 RAB8A (ENSSPAG00000016131) HSH2D (ENSSPAG00000016487) ENSSPAG00000016502 tax1bp3 (ENSSPAG00000016509) slc1a6 (ENSSPAG00000016525) ENSSPAG00000016595 pole4 (ENSSPAG00000016611) ENSSPAG00000016626 ccl25b (ENSSPAG00000016637) gclm (ENSSPAG00000016667) ENSSPAG00000016698 Pomacentridae_A ANCESTRAL SPECIES 48 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.b.c ENSGT00940000157399 Amphiprion ANCESTRAL SPECIES 70 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ENSGT00940000155042.a.b.c ENSGT00940000157399 ENSGT00940000161649 Clown anemonefish MODERN SPECIES 1080 tpm4a (ENSAOCG00000009435) ##22 ENSAOCG00000009411 RAB8A (ENSAOCG00000001947) HSH2D (ENSAOCG00000009363) tax1bp3 (ENSAOCG00000009350) slc1a6 (ENSAOCG00000009336) ENSAOCG00000009310 ENSAOCG00000009300 ENSAOCG00000000564 pole4 (ENSAOCG00000009281) ENSAOCG00000009272 ccl25b (ENSAOCG00000009248) gclm (ENSAOCG00000009231) dnttip2 (ENSAOCG00000009218) Orange clownfish MODERN SPECIES 11 ENSAPEG00000023648 gna11a (ENSAPEG00000023595) gna15.4 (ENSAPEG00000023578) C2CD4C (ENSAPEG00000023553) cdc34a (ENSAPEG00000023541) ap3d1 (ENSAPEG00000023483) hdgfl2 (ENSAPEG00000023436) ENSAPEG00000023427 fam32a (ENSAPEG00000023419) mrpl54 (ENSAPEG00000023406) malt2 (ENSAPEG00000023362) safb (ENSAPEG00000023342) lpl (ENSAPEG00000023328) ENSAPEG00000023317 ENSAPEG00000023296 tpm4a (ENSAPEG00000023244) ##22 ENSAPEG00000023213 RAB8A (ENSAPEG00000023191) HSH2D (ENSAPEG00000023176) tax1bp3 (ENSAPEG00000023158) slc1a6 (ENSAPEG00000023125) ENSAPEG00000023104 pole4 (ENSAPEG00000023093) ENSAPEG00000023087 ccl25b (ENSAPEG00000023079) gclm (ENSAPEG00000023025) dnttip2 (ENSAPEG00000023016) spata6 (ENSAPEG00000023000) bend5 (ENSAPEG00000022984) AGBL4 (ENSAPEG00000022947) elavl4 (ENSAPEG00000022826) Cichlidae ANCESTRAL SPECIES 17 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000164336 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 Pseudocrenilabrinae ANCESTRAL SPECIES 10 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b.d ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Nile tilapia MODERN SPECIES 14 gna11a (ENSONIG00000002275) gna15.4 (ENSONIG00000037339) C2CD4C (ENSONIG00000020821) cdc34a (ENSONIG00000040170) ap3d1 (ENSONIG00000002299) hdgfl2 (ENSONIG00000002307) ENSONIG00000042491 fh (ENSONIG00000020822) fam32a (ENSONIG00000002311) mrpl54 (ENSONIG00000035988) malt2 (ENSONIG00000002314) safb (ENSONIG00000002318) lpl (ENSONIG00000002321) ENSONIG00000002328 ENSONIG00000002331 tpm4a (ENSONIG00000030984) ##22 ENSONIG00000033767 RAB8A (ENSONIG00000002346) HSH2D (ENSONIG00000002347) tax1bp3 (ENSONIG00000031540) slc1a6 (ENSONIG00000002349) ENSONIG00000031222 pole4 (ENSONIG00000002352) ENSONIG00000002353 ccl25b (ENSONIG00000027948) gclm (ENSONIG00000002354) dnttip2 (ENSONIG00000036421) spata6 (ENSONIG00000036474) bend5 (ENSONIG00000002358) elavl4 (ENSONIG00000031960) dmrta2 (ENSONIG00000002365) Pseudocrenilabrinae_A ANCESTRAL SPECIES 26 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b.d ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Haplochromini ANCESTRAL SPECIES 16 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b.d ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Burton s mouthbrooder MODERN SPECIES 307 gna11a (ENSHBUG00000008547) gna15.4 (ENSHBUG00000008588) C2CD4C (ENSHBUG00000008597) cdc34a (ENSHBUG00000008622) ap3d1 (ENSHBUG00000008884) ENSHBUG00000008943 ENSHBUG00000008966 fh (ENSHBUG00000008979) fam32a (ENSHBUG00000008990) mrpl54 (ENSHBUG00000009028) malt2 (ENSHBUG00000009137) safb (ENSHBUG00000009218) lpl (ENSHBUG00000009247) ENSHBUG00000009291 ENSHBUG00000009311 tpm4a (ENSHBUG00000009380) ##22 ENSHBUG00000009410 RAB8A (ENSHBUG00000009450) ENSHBUG00000009462 tax1bp3 (ENSHBUG00000009495) slc1a6 (ENSHBUG00000009529) ENSHBUG00000009562 pole4 (ENSHBUG00000009585) ENSHBUG00000009593 ccl25b (ENSHBUG00000009605) gclm (ENSHBUG00000009613) dnttip2 (ENSHBUG00000009619) ENSHBUG00000009632 bend5 (ENSHBUG00000001068) elavl4 (ENSHBUG00000009691) dmrta2 (ENSHBUG00000009712) Haplochromini_A ANCESTRAL SPECIES 15 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b.d ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l P. nyererei MODERN SPECIES 351 gna11a (ENSPNYG00000022196) gna15.4 (ENSPNYG00000022166) C2CD4C (ENSPNYG00000022160) cdc34a (ENSPNYG00000022149) ap3d1 (ENSPNYG00000022090) hdgfl2 (ENSPNYG00000022043) ENSPNYG00000022035 fh (ENSPNYG00000022025) fam32a (ENSPNYG00000022016) mrpl54 (ENSPNYG00000022006) malt2 (ENSPNYG00000021980) ENSPNYG00000021972 lpl (ENSPNYG00000021951) ENSPNYG00000021941 ENSPNYG00000021929 tpm4a (ENSPNYG00000021910) ##22 ENSPNYG00000021895 RAB8A (ENSPNYG00000021884) ENSPNYG00000021869 tax1bp3 (ENSPNYG00000021864) slc1a6 (ENSPNYG00000021853) ENSPNYG00000021846 pole4 (ENSPNYG00000021834) ENSPNYG00000021823 ccl25b (ENSPNYG00000021810) gclm (ENSPNYG00000021799) dnttip2 (ENSPNYG00000021789) ENSPNYG00000021775 ENSPNYG00000021761 bend5 (ENSPNYG00000021752) AGBL4 (ENSPNYG00000021733) Haplochromini_B ANCESTRAL SPECIES 10 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000164336 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b.d ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Zebra mbuna MODERN SPECIES 1105 ENSMZEG00005008827 gna11a (ENSMZEG00005008850) gna15.4 (ENSMZEG00005008870) C2CD4C (ENSMZEG00005008886) cdc34a (ENSMZEG00005008890) ap3d1 (ENSMZEG00005008914) hdgfl2 (ENSMZEG00005008974) fh (ENSMZEG00005008986) fam32a (ENSMZEG00005009001) mrpl54 (ENSMZEG00005009023) malt2 (ENSMZEG00005009058) safb (ENSMZEG00005009120) lpl (ENSMZEG00005009172) ENSMZEG00005009183 ENSMZEG00005009234 tpm4a (ENSMZEG00005009249) ##22 ENSMZEG00005009272 ENSMZEG00005009281 ENSMZEG00005009291 tax1bp3 (ENSMZEG00005009301) slc1a6 (ENSMZEG00005009321) ENSMZEG00005009349 pole4 (ENSMZEG00005009364) ENSMZEG00005009374 ENSMZEG00005009385 gclm (ENSMZEG00005009395) dnttip2 (ENSMZEG00005009408) ENSMZEG00005009424 ENSMZEG00005009433 AGBL4 (ENSMZEG00005009441) bend5 (ENSMZEG00005009448) Eastern happy MODERN SPECIES 14 gna11a (ENSACLG00000000974) gna15.4 (ENSACLG00000001029) C2CD4C (ENSACLG00000001094) cdc34a (ENSACLG00000001137) ap3d1 (ENSACLG00000001499) hdgfl2 (ENSACLG00000001765) ENSACLG00000001846 fh (ENSACLG00000001856) fam32a (ENSACLG00000001864) mrpl54 (ENSACLG00000001877) malt2 (ENSACLG00000001893) safb (ENSACLG00000001926) lpl (ENSACLG00000001986) ENSACLG00000002017 ENSACLG00000002040 tpm4a (ENSACLG00000002059) ##22 ENSACLG00000002121 RAB8A (ENSACLG00000002134) ENSACLG00000002169 tax1bp3 (ENSACLG00000002179) slc1a6 (ENSACLG00000002200) ENSACLG00000002256 pole4 (ENSACLG00000002609) ENSACLG00000002638 ccl25b (ENSACLG00000002656) gclm (ENSACLG00000002661) dnttip2 (ENSACLG00000002675) spata6 (ENSACLG00000002687) bend5 (ENSACLG00000002720) agbl4 (ENSACLG00000002736) elavl4 (ENSACLG00000002786) Atherinomorphae ANCESTRAL SPECIES 7 ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000167938 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Oryzias ANCESTRAL SPECIES 5 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Oryzias_a ANCESTRAL SPECIES 24 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000154706.rb.a ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00390000001724.l ENSGT00940000155042.a.a Japanese Medaka HdrR MODERN SPECIES 18 gna11a (ENSORLG00000016885) gna15.4 (ENSORLG00000026736) C2CD4C (ENSORLG00000016897) cdc34a (ENSORLG00000030500) ap3d1 (ENSORLG00000016931) ENSORLG00000016948 fh (ENSORLG00000016952) fam32a (ENSORLG00000016957) mrpl54 (ENSORLG00000016960) malt2 (ENSORLG00000016971) safb (ENSORLG00000016989) ENSORLG00000026174 lpl (ENSORLG00000016997) ENSORLG00000017006 ENSORLG00000017020 tpm4a (ENSORLG00000017032) ##22 ENSORLG00000026550 ENSORLG00000017038 HSH2D (ENSORLG00000022582) tax1bp3 (ENSORLG00000017045) slc1a6 (ENSORLG00000017062) ENSORLG00000017073 ENSORLG00000025660 ENSORLG00000030041 pole4 (ENSORLG00000017077) ENSORLG00000025548 ccl25b (ENSORLG00000028881) gclm (ENSORLG00000017101) dnttip2 (ENSORLG00000017105) spata6 (ENSORLG00000027416) AGBL4 (ENSORLG00000028608) Chinese medaka MODERN SPECIES 1012 ENSOSIG00000011296 ENSOSIG00000011298 gna11a (ENSOSIG00000011302) gna15.1 (ENSOSIG00000011357) C2CD4C (ENSOSIG00000011360) cdc34a (ENSOSIG00000011363) hdgfl2 (ENSOSIG00000011375) fam32a (ENSOSIG00000011394) mrpl54 (ENSOSIG00000011395) malt2 (ENSOSIG00000011397) safb (ENSOSIG00000011404) lpl (ENSOSIG00000011410) ENSOSIG00000011414 tpm4a (ENSOSIG00000011428) ##22 ENSOSIG00000011794 RAB8A (ENSOSIG00000011798) ENSOSIG00000011805 ENSOSIG00000011806 slc1a6 (ENSOSIG00000011808) ENSOSIG00000011815 pole4 (ENSOSIG00000011816) ENSOSIG00000011818 ccl25b (ENSOSIG00000011819) gclm (ENSOSIG00000011820) ENSOSIG00000011821 ENSOSIG00000011823 ENSOSIG00000011825 AGBL4 (ENSOSIG00000011832) bend5 (ENSOSIG00000011841) Oryzias_b ANCESTRAL SPECIES 15 ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l ENSGT00940000157399 Indian medaka MODERN SPECIES 13 gna11a (ENSOMEG00000008782) gna15.4 (ENSOMEG00000008824) C2CD4C (ENSOMEG00000000219) cdc34a (ENSOMEG00000008878) ap3d1 (ENSOMEG00000008912) hdgfl2 (ENSOMEG00000008944) ENSOMEG00000008960 fh (ENSOMEG00000008972) fam32a (ENSOMEG00000008978) mrpl54 (ENSOMEG00000009005) malt2 (ENSOMEG00000009025) safb (ENSOMEG00000009066) lpl (ENSOMEG00000009105) ENSOMEG00000009136 ENSOMEG00000009155 tpm4a (ENSOMEG00000009197) ##22 ENSOMEG00000009380 RAB8A (ENSOMEG00000009507) HSH2D (ENSOMEG00000009537) tax1bp3 (ENSOMEG00000009560) slc1a6 (ENSOMEG00000009608) ENSOMEG00000009626 pole4 (ENSOMEG00000009651) ENSOMEG00000009674 ccl25b (ENSOMEG00000009694) gclm (ENSOMEG00000009726) ENSOMEG00000009754 ENSOMEG00000009769 ENSOMEG00000009782 AGBL4 (ENSOMEG00000009813) bend5 (ENSOMEG00000009893) Cyprinodontiformes ANCESTRAL SPECIES 7 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l ENSGT00940000157399 Cyprinodontoidei ANCESTRAL SPECIES 10 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l ENSGT00940000157399 NAME_4 ANCESTRAL SPECIES 17 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT01100000265702 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l ENSGT00940000157399 Mummichog MODERN SPECIES 2394 ENSFHEG00000003954 ENSFHEG00000003969 gna11a (ENSFHEG00000003991) gna15.4 (ENSFHEG00000004004) C2CD4C (ENSFHEG00000004014) cdc34a (ENSFHEG00000004034) ap3d1 (ENSFHEG00000004074) hdgfl2 (ENSFHEG00000004176) fh (ENSFHEG00000004186) fam32a (ENSFHEG00000004197) malt2 (ENSFHEG00000004207) safb (ENSFHEG00000004219) lpl (ENSFHEG00000004242) ENSFHEG00000004252 ENSFHEG00000004264 tpm4a (ENSFHEG00000004277) ##22 ENSFHEG00000004295 RAB8A (ENSFHEG00000000108) ENSFHEG00000004347 tax1bp3 (ENSFHEG00000004366) slc1a6 (ENSFHEG00000004390) ENSFHEG00000004402 pole4 (ENSFHEG00000004417) ENSFHEG00000004430 ccl25b (ENSFHEG00000004442) gclm (ENSFHEG00000004453) dnttip2 (ENSFHEG00000004464) spata6 (ENSFHEG00000004470) bend5 (ENSFHEG00000000113) AGBL4 (ENSFHEG00000000115) elavl4 (ENSFHEG00000004530) Sheepshead minnow MODERN SPECIES 794 C2CD4C (ENSCVAG00000002130) cdc34a (ENSCVAG00000002136) ap3d1 (ENSCVAG00000002183) hdgfl2 (ENSCVAG00000002192) ENSCVAG00000002202 fam32a (ENSCVAG00000002207) mrpl54 (ENSCVAG00000002210) malt2 (ENSCVAG00000002218) safb (ENSCVAG00000002226) lpl (ENSCVAG00000002234) ENSCVAG00000000072 ENSCVAG00000002245 tpm4a (ENSCVAG00000002268) ##22 ENSCVAG00000002274 RAB8A (ENSCVAG00000002291) HSH2D (ENSCVAG00000002293) tax1bp3 (ENSCVAG00000002306) slc1a6 (ENSCVAG00000002321) ENSCVAG00000002331 Poeciliinae ANCESTRAL SPECIES 7 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000167938 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l ENSGT00940000157399 Poecilia ANCESTRAL SPECIES 1 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000167938 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l ENSGT00940000157399 NAME_6 ANCESTRAL SPECIES 61 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 Sailfin molly MODERN SPECIES 2729 tpm4a (ENSPLAG00000013359) ##22 ENSPLAG00000013332 ENSPLAG00000013329 Amazon molly MODERN SPECIES 756 ENSPFOG00000006842 C2CD4C (ENSPFOG00000020255) cdc34a (ENSPFOG00000006939) ap3d1 (ENSPFOG00000006981) hdgfl2 (ENSPFOG00000007282) fh (ENSPFOG00000020256) fam32a (ENSPFOG00000007372) mrpl54 (ENSPFOG00000007409) malt2 (ENSPFOG00000007440) safb (ENSPFOG00000007745) lpl (ENSPFOG00000007985) ENSPFOG00000008267 ENSPFOG00000008398 ENSPFOG00000024183 tpm4a (ENSPFOG00000008605) ##22 ENSPFOG00000023636 Guppy MODERN SPECIES 456 gna11a (ENSPREG00000012006) gna15.4 (ENSPREG00000012057) C2CD4C (ENSPREG00000012069) ENSPREG00000012077 ap3d1 (ENSPREG00000012126) hdgfl2 (ENSPREG00000012329) ENSPREG00000012355 fh (ENSPREG00000012363) fam32a (ENSPREG00000012381) mrpl54 (ENSPREG00000012425) malt2 (ENSPREG00000012440) safb (ENSPREG00000012496) lpl (ENSPREG00000012534) ENSPREG00000012568 ENSPREG00000012586 tpm4a (ENSPREG00000012635) ##22 ENSPREG00000012703 RAB8A (ENSPREG00000012725) ENSPREG00000012769 tax1bp3 (ENSPREG00000012783) slc1a6 (ENSPREG00000012814) ENSPREG00000012873 pole4 (ENSPREG00000012888) ENSPREG00000012954 ccl25b (ENSPREG00000013372) gclm (ENSPREG00000013425) ENSPREG00000013447 ENSPREG00000013468 ENSPREG00000013478 PTGER3 (ENSPREG00000013490) zranb2 (ENSPREG00000013499) Platyfish MODERN SPECIES 23 gna15.4 (ENSXMAG00000013441) C2CD4C (ENSXMAG00000020383) cdc34a (ENSXMAG00000023383) ap3d1 (ENSXMAG00000003514) hdgfl2 (ENSXMAG00000003505) fh (ENSXMAG00000020382) fam32a (ENSXMAG00000003501) mrpl54 (ENSXMAG00000003500) malt2 (ENSXMAG00000003477) safb (ENSXMAG00000003458) lpl (ENSXMAG00000003404) ENSXMAG00000003401 ENSXMAG00000003390 ENSXMAG00000022088 ENSXMAG00000003387 tpm4a (ENSXMAG00000003376) ##22 RAB8A (ENSXMAG00000003370) HSH2D (ENSXMAG00000003369) tax1bp3 (ENSXMAG00000028183) slc1a6 (ENSXMAG00000003358) ENSXMAG00000023760 pole4 (ENSXMAG00000003356) ENSXMAG00000028000 ccl25b (ENSXMAG00000023965) gclm (ENSXMAG00000003349) dnttip2 (ENSXMAG00000025809) ENSXMAG00000003345 bend5 (ENSXMAG00000003343) ENSXMAG00000027579 AGBL4 (ENSXMAG00000003340) elavl4 (ENSXMAG00000025683) Aplocheiloidei ANCESTRAL SPECIES 3 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l ENSGT00940000155042.a.b Mangrove rivulus MODERN SPECIES 8 ENSKMAG00000000235 gna11a (ENSKMAG00000000157) gna15.4 (ENSKMAG00000000141) C2CD4C (ENSKMAG00000000137) cdc34a (ENSKMAG00000022315) ap3d1 (ENSKMAG00000022314) hdgfl2 (ENSKMAG00000022313) ENSKMAG00000022312 fam32a (ENSKMAG00000022311) mrpl54 (ENSKMAG00000022310) malt2 (ENSKMAG00000022309) safb (ENSKMAG00000022308) lpl (ENSKMAG00000022307) ENSKMAG00000022306 ENSKMAG00000022305 tpm4a (ENSKMAG00000022304) ##22 ENSKMAG00000022303 ENSKMAG00000022302 ENSKMAG00000022301 tax1bp3 (ENSKMAG00000022300) slc1a6 (ENSKMAG00000022299) ENSKMAG00000022298 pole4 (ENSKMAG00000022297) ENSKMAG00000022296 ccl25b (ENSKMAG00000022295) gclm (ENSKMAG00000022294) dnttip2 (ENSKMAG00000022293) ENSKMAG00000022292 bend5 (ENSKMAG00000022291) AGBL4 (ENSKMAG00000022290) elavl4 (ENSKMAG00000022289) Turquoise killifish MODERN SPECIES 1626 gna11a (ENSNFUG00015024862) gna15.4 (ENSNFUG00015024859) C2CD4C (ENSNFUG00015024856) CDC34A (ENSNFUG00015024854) ENSNFUG00015024853 AP3D1 (ENSNFUG00015024840) HDGFRP2 (ENSNFUG00015024838) fh (ENSNFUG00015024834) fam32a (ENSNFUG00015024832) mrpl54 (ENSNFUG00015024829) MALT1A (ENSNFUG00015024823) ENSNFUG00015024818 LPL (ENSNFUG00015024799) ENSNFUG00015024777 ENSNFUG00015024723 tpm4a (ENSNFUG00015024661) ##22 ENSNFUG00015024646 RAB8A (ENSNFUG00015024635) HSH2D (ENSNFUG00015024633) TAX1BP3 (ENSNFUG00015024630) GCLM (ENSNFUG00015024629) dnttip2 (ENSNFUG00015024627) ENSNFUG00015024626 ENSNFUG00015024620 BEND5 (ENSNFUG00015024617) ENSNFUG00015024615 agbl4 (ENSNFUG00015024610) elavl4 (ENSNFUG00015024586) dmrta2 (ENSNFUG00015024570) FAF1 (ENSNFUG00015024311) cdkn2c (ENSNFUG00015024279) Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000167938 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Eupercaria ANCESTRAL SPECIES 8 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Eupecaria_A ANCESTRAL SPECIES 11 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Ballan wrasse MODERN SPECIES 122 use1 (ENSLBEG00000005541) usf1l (ENSLBEG00000005586) gna15.4 (ENSLBEG00000005634) C2CD4C (ENSLBEG00000005647) cdc34a (ENSLBEG00000005657) ap3d1 (ENSLBEG00000005725) hdgfl2 (ENSLBEG00000005864) fh (ENSLBEG00000005899) fam32a (ENSLBEG00000005913) mrpl54 (ENSLBEG00000005935) malt2 (ENSLBEG00000005954) safb (ENSLBEG00000006015) lpl (ENSLBEG00000006041) ENSLBEG00000006112 ENSLBEG00000006166 tpm4a (ENSLBEG00000006203) ##22 ENSLBEG00000006268 RAB8A (ENSLBEG00000006289) hsh2d (ENSLBEG00000006325) tax1bp3 (ENSLBEG00000006345) slc1a6 (ENSLBEG00000006408) ENSLBEG00000006495 pole4 (ENSLBEG00000006519) ENSLBEG00000006629 ccl25b (ENSLBEG00000006903) gclm (ENSLBEG00000006923) dnttip2 (ENSLBEG00000006945) ENSLBEG00000006969 ENSLBEG00000006999 AGBL4 (ENSLBEG00000007028) bend5 (ENSLBEG00000007054) Eupecaria_B ANCESTRAL SPECIES 10 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ENSGT00390000001724.l ENSGT00940000155042.a.a ENSGT00940000157399 Eupecaria_C ANCESTRAL SPECIES 4 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ENSGT00390000001724.l ENSGT00940000155042.a.a ENSGT00940000157399 Gilthead seabream MODERN SPECIES 2 gna11a (ENSSAUG00010011261) gna15.4 (ENSSAUG00010011341) C2CD4C (ENSSAUG00010011343) cdc34a (ENSSAUG00010011344) ap3d1 (ENSSAUG00010011350) ENSSAUG00010011362 ENSSAUG00010011363 fh (ENSSAUG00010011365) fam32a (ENSSAUG00010011367) mrpl54 (ENSSAUG00010011369) malt2 (ENSSAUG00010011376) safb (ENSSAUG00010011381) lpl (ENSSAUG00010011385) ENSSAUG00010011392 ENSSAUG00010011396 tpm4a (ENSSAUG00010011444) ##22 ENSSAUG00010011470 RAB8A (ENSSAUG00010011473) HSH2D (ENSSAUG00010011479) tax1bp3 (ENSSAUG00010011480) slc1a6 (ENSSAUG00010011483) ENSSAUG00010011484 pole4 (ENSSAUG00010011485) ENSSAUG00010011486 ccl25b (ENSSAUG00010011488) gclm (ENSSAUG00010011489) dnttip2 (ENSSAUG00010011490) ENSSAUG00010011491 AGBL4 (ENSSAUG00010011492) bend5 (ENSSAUG00010011495) elavl4 (ENSSAUG00010011503) Eupercaria_incertae_sedis ANCESTRAL SPECIES 3 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ENSGT00390000001724.l ENSGT00940000155042.a.a ENSGT00940000157399 Large yellow croaker MODERN SPECIES 489 gna11a (ENSLCRG00005013635) gna15.4 (ENSLCRG00005013686) C2CD4C (ENSLCRG00005013690) cdc34a (ENSLCRG00005013692) ap3d1 (ENSLCRG00005013704) hdgfl2 (ENSLCRG00005015766) fh (ENSLCRG00005015767) mrpl54 (ENSLCRG00005015768) malt2 (ENSLCRG00005015769) fam32a (ENSLCRG00005015771) mrpl54 (ENSLCRG00005015773) safb (ENSLCRG00005015774) lpl (ENSLCRG00005009555) ENSLCRG00005009558 ENSLCRG00005009559 tpm4a (ENSLCRG00005009562) ##22 ENSLCRG00005009829 ENSLCRG00005009830 rab8a (ENSLCRG00005009831) ENSLCRG00005009833 tax1bp3 (ENSLCRG00005009834) slc1a6 (ENSLCRG00005009852) ENSLCRG00005010462 pole4 (ENSLCRG00005010463) ENSLCRG00005010466 ccl25b (ENSLCRG00005010468) gclm (ENSLCRG00005010471) dnttip2 (ENSLCRG00005010473) spata6 (ENSLCRG00005010478) bend5 (ENSLCRG00005010482) elavl4 (ENSLCRG00005010488) European seabass MODERN SPECIES 17 ENSDLAG00005002015 gna11a (ENSDLAG00005029687) gna15.4 (ENSDLAG00005001959) ENSDLAG00005026602 cdc34a (ENSDLAG00005029619) ap3d1 (ENSDLAG00005001932) hdgfl2 (ENSDLAG00005034213) ENSDLAG00005026417 fam32a (ENSDLAG00005028714) ENSDLAG00005001845 safb (ENSDLAG00005001831) lpl (ENSDLAG00005001734) ENSDLAG00005001709 ENSDLAG00005001680 ENSDLAG00005025987 TPM4 (ENSDLAG00005001319) ##22 ENSDLAG00005030784 HSH2D (ENSDLAG00005025978) tax1bp3 (ENSDLAG00005025977) slc1a6 (ENSDLAG00005025971) ENSDLAG00005025970 pole4 (ENSDLAG00005025969) ENSDLAG00005025966 ccl25b (ENSDLAG00005025962) gclm (ENSDLAG00005025960) dnttip2 (ENSDLAG00005025959) bend5 (ENSDLAG00005025950) AGBL4 (ENSDLAG00005027588) elavl4 (ENSDLAG00005025942) dmrta2 (ENSDLAG00005025934) faf1 (ENSDLAG00005025859) Perciformes ANCESTRAL SPECIES 8 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l ENSGT00940000155042.a.b Cottioidei ANCESTRAL SPECIES 5 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l ENSGT00940000155042.a.b Stickleback MODERN SPECIES 8 ENSGACG00000011529 plpp2b (ENSGACG00000011516) ENSGACG00000011508 ENSGACG00000011493 gna11a (ENSGACG00000011473) gna15.1 (ENSGACG00000011472) cdc34a (ENSGACG00000011444) ap3d1 (ENSGACG00000011421) hdgfl2 (ENSGACG00000011407) fh (ENSGACG00000011403) fam32a (ENSGACG00000011396) safb (ENSGACG00000011385) lpl (ENSGACG00000011354) ENSGACG00000011336 ENSGACG00000011305 tpm4a (ENSGACG00000011294) ##22 ENSGACG00000011286 RAB8A (ENSGACG00000011272) tax1bp3 (ENSGACG00000011267) slc1a6 (ENSGACG00000011239) pole4 (ENSGACG00000011233) ENSGACG00000011228 ccl25b (ENSGACG00000011219) gclm (ENSGACG00000011182) ENSGACG00000011180 ENSGACG00000011176 ENSGACG00000011174 AGBL4 (ENSGACG00000011171) bend5 (ENSGACG00000011164) elavl4 (ENSGACG00000011152) dmrta2 (ENSGACG00000011145) Lumpfish MODERN SPECIES 19 ENSCLMG00005013657 gna11a (ENSCLMG00005013600) gna15.4 (ENSCLMG00005013599) C2CD4C (ENSCLMG00005013598) cdc34a (ENSCLMG00005013596) ap3d1 (ENSCLMG00005013594) hdgfl2 (ENSCLMG00005013588) fh (ENSCLMG00005013584) fam32a (ENSCLMG00005013582) mrpl54 (ENSCLMG00005013581) malt2 (ENSCLMG00005013577) safb (ENSCLMG00005013575) lpl (ENSCLMG00005013572) ENSCLMG00005013570 ENSCLMG00005013569 tpm4a (ENSCLMG00005013338) ##22 ENSCLMG00005013333 RAB8A (ENSCLMG00005013330) HSH2D (ENSCLMG00005013329) tax1bp3 (ENSCLMG00005013327) slc1a6 (ENSCLMG00005013325) ENSCLMG00005013321 pole4 (ENSCLMG00005013320) ENSCLMG00005013310 ENSCLMG00005013309 gclm (ENSCLMG00005013308) dnttip2 (ENSCLMG00005013307) ENSCLMG00005013305 AGBL4 (ENSCLMG00005013304) bend5 (ENSCLMG00005013302) agbl4 (ENSCLMG00005013301) Perciformes_a ANCESTRAL SPECIES 6 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00530000063821.a ENSGT00390000001724.l ENSGT00940000155042.a.a ENSGT00940000157399 Channel bull blenny MODERN SPECIES 18 gna11a (ENSCGOG00000001513) gna15.4 (ENSCGOG00000001659) C2CD4C (ENSCGOG00000001725) cdc34a (ENSCGOG00000001731) ap3d1 (ENSCGOG00000001818) ENSCGOG00000002635 ENSCGOG00000002654 fh (ENSCGOG00000002673) fam32a (ENSCGOG00000002682) mrpl54 (ENSCGOG00000002722) malt2 (ENSCGOG00000002753) safb (ENSCGOG00000002844) lpl (ENSCGOG00000002862) ENSCGOG00000003035 ENSCGOG00000003174 tpm4a (ENSCGOG00000003212) ##22 ENSCGOG00000003524 RAB8A (ENSCGOG00000003530) ENSCGOG00000003635 ENSCGOG00000003640 tax1bp3 (ENSCGOG00000003645) slc1a6 (ENSCGOG00000003664) ENSCGOG00000003871 pole4 (ENSCGOG00000003876) ENSCGOG00000003888 ccl25b (ENSCGOG00000003899) gclm (ENSCGOG00000003911) dnttip2 (ENSCGOG00000003915) spata6 (ENSCGOG00000003920) bend5 (ENSCGOG00000003928) ENSCGOG00000003932 Pike perch MODERN SPECIES 21 gna11a (ENSSLUG00000022916) gna15.4 (ENSSLUG00000022925) C2CD4C (ENSSLUG00000022931) cdc34a (ENSSLUG00000022936) ap3d1 (ENSSLUG00000022970) ENSSLUG00000023022 ENSSLUG00000023027 fh (ENSSLUG00000023032) fam32a (ENSSLUG00000023035) mrpl54 (ENSSLUG00000023040) safb (ENSSLUG00000023053) lpl (ENSSLUG00000005201) ENSSLUG00000005288 ENSSLUG00000005369 ENSSLUG00000005436 tpm4a (ENSSLUG00000005470) ##22 ENSSLUG00000005872 RAB8A (ENSSLUG00000005879) ENSSLUG00000005893 tax1bp3 (ENSSLUG00000005909) slc1a6 (ENSSLUG00000005917) ENSSLUG00000005933 pole4 (ENSSLUG00000005935) ENSSLUG00000005944 ccl25b (ENSSLUG00000006015) gclm (ENSSLUG00000006019) dnttip2 (ENSSLUG00000006026) spata6 (ENSSLUG00000006029) AGBL4 (ENSSLUG00000006045) bend5 (ENSSLUG00000006120) elavl4 (ENSSLUG00000006161) Tetraodontidae ANCESTRAL SPECIES 5 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000154706.rb.a ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000157246.b ENSGT00940000173465 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l ENSGT00940000155042.a.b Tetraodon MODERN SPECIES ENSTNIG00000015458 chico (ENSTNIG00000009553) gna11a (ENSTNIG00000015459) gna15.4 (ENSTNIG00000015460) C2CD4C (ENSTNIG00000015461) cdc34a (ENSTNIG00000015462) ap3d1 (ENSTNIG00000015464) ENSTNIG00000015465 fam32a (ENSTNIG00000015467) mrpl54 (ENSTNIG00000015468) malt2 (ENSTNIG00000015469) safb (ENSTNIG00000015470) lpl (ENSTNIG00000015471) ENSTNIG00000015472 ENSTNIG00000015473 tpm4a (ENSTNIG00000000267) ##22 RAB8A (ENSTNIG00000015474) tax1bp3 (ENSTNIG00000015475) slc1a6 (ENSTNIG00000015476) pole4 (ENSTNIG00000015477) ENSTNIG00000015478 ccl25b (ENSTNIG00000015479) gclm (ENSTNIG00000015480) ENSTNIG00000000907 spata6 (ENSTNIG00000015481) AGBL4 (ENSTNIG00000015482) bend5 (ENSTNIG00000015483) agbl4 (ENSTNIG00000015484) elavl4 (ENSTNIG00000015485) dmrta2 (ENSTNIG00000015486) faf1 (ENSTNIG00000015487) Fugu MODERN SPECIES 12 gna11a (ENSTRUG00000032396) gna15.4 (ENSTRUG00000005955) C2CD4C (ENSTRUG00000005941) cdc34 (ENSTRUG00000030800) ap3d1 (ENSTRUG00000005025) fh (ENSTRUG00000004670) fam32a (ENSTRUG00000004649) mrpl54 (ENSTRUG00000004609) malt2 (ENSTRUG00000004243) safb (ENSTRUG00000003567) ENSTRUG00000031316 lpl (ENSTRUG00000002552) ENSTRUG00000001897 ENSTRUG00000001582 ENSTRUG00000025658 tpm4 (ENSTRUG00000001260) ##22 RAB8A (ENSTRUG00000030620) ENSTRUG00000024430 tax1bp3 (ENSTRUG00000024088) slc1a6 (ENSTRUG00000000825) ENSTRUG00000020791 pole4 (ENSTRUG00000000810) ENSTRUG00000027133 ccl25b (ENSTRUG00000019960) gclm (ENSTRUG00000000742) ENSTRUG00000000733 ENSTRUG00000029282 ENSTRUG00000024029 AGBL4 (ENSTRUG00000021791) elavl4 (ENSTRUG00000000523) dmrta2 (ENSTRUG00000001824) Percomorphaceae_D ANCESTRAL SPECIES 8 ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l ENSGT00940000155042.a.b Carangaria ANCESTRAL SPECIES 7 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Carangaria_A ANCESTRAL SPECIES 3 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Seriola ANCESTRAL SPECIES 21 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 Yellowtail amberjack MODERN SPECIES 2696 gna11a (ENSSLDG00000002375) gna15.4 (ENSSLDG00000002351) C2CD4C (ENSSLDG00000002340) cdc34a (ENSSLDG00000002303) ap3d1 (ENSSLDG00000001882) hdgfl2 (ENSSLDG00000001828) FH (ENSSLDG00000001813) fam32a (ENSSLDG00000001808) mrpl54 (ENSSLDG00000001781) malt2 (ENSSLDG00000001693) safb (ENSSLDG00000001670) lpl (ENSSLDG00000001657) ENSSLDG00000001612 ENSSLDG00000001590 ENSSLDG00000001550 tpm4a (ENSSLDG00000001512) ##22 RAB8A (ENSSLDG00000001452) ENSSLDG00000001426 ENSSLDG00000001411 tax1bp3 (ENSSLDG00000001374) slc1a6 (ENSSLDG00000001318) ENSSLDG00000001302 pole4 (ENSSLDG00000001264) ENSSLDG00000001261 ccl25b (ENSSLDG00000001239) gclm (ENSSLDG00000001213) Greater amberjack MODERN SPECIES 111 ENSSDUG00000009261 gna11a (ENSSDUG00000009285) gna15.4 (ENSSDUG00000009320) C2CD4C (ENSSDUG00000009364) cdc34a (ENSSDUG00000009373) ap3d1 (ENSSDUG00000009405) hdgfl2 (ENSSDUG00000009499) fh (ENSSDUG00000009520) fam32a (ENSSDUG00000009529) mrpl54 (ENSSDUG00000009545) malt2 (ENSSDUG00000009559) safb (ENSSDUG00000009652) lpl (ENSSDUG00000009768) ENSSDUG00000009789 ENSSDUG00000009825 tpm4a (ENSSDUG00000010102) ##22 ENSSDUG00000010133 RAB8A (ENSSDUG00000010148) ENSSDUG00000010190 tax1bp3 (ENSSDUG00000010227) slc1a6 (ENSSDUG00000010237) ENSSDUG00000010264 pole4 (ENSSDUG00000010273) ENSSDUG00000010280 ccl25b (ENSSDUG00000010295) gclm (ENSSDUG00000010304) Barramundi perch MODERN SPECIES 43 ENSLCAG00010027150 gna11a (ENSLCAG00010027141) gna15.4 (ENSLCAG00010027133) C2CD4C (ENSLCAG00010027131) ENSLCAG00010027123 ap3d1 (ENSLCAG00010027113) hdgfl2 (ENSLCAG00010027104) fh (ENSLCAG00010027101) fam32a (ENSLCAG00010027098) mrpl54 (ENSLCAG00010027096) malt2 (ENSLCAG00010027090) safb (ENSLCAG00010027088) lpl (ENSLCAG00010027083) ENSLCAG00010027078 ENSLCAG00010027074 tpm4a (ENSLCAG00010027042) ##22 ENSLCAG00010027033 RAB8A (ENSLCAG00010027030) hsh2d (ENSLCAG00010027025) tax1bp3 (ENSLCAG00010027024) slc1a6 (ENSLCAG00010027021) ENSLCAG00010027020 pole4 (ENSLCAG00010027018) ENSLCAG00010027016 ccl25b (ENSLCAG00010027015) dnttip2 (ENSLCAG00010027011) spata6 (ENSLCAG00010027010) AGBL4 (ENSLCAG00010027008) bend5 (ENSLCAG00010027001) agbl4 (ENSLCAG00010026997) elavl4 (ENSLCAG00010026991) Pleuronectoidei ANCESTRAL SPECIES 30 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00390000001724.l ENSGT00940000155042.a.a Tongue sole MODERN SPECIES 11 rpl5b (ENSCSEG00000019969) gna11a (ENSCSEG00000019958) gna15.4 (ENSCSEG00000019953) C2CD4C (ENSCSEG00000019952) cdc34a (ENSCSEG00000019941) ap3d1 (ENSCSEG00000019896) hdgfl2 (ENSCSEG00000019888) fh (ENSCSEG00000019885) fam32a (ENSCSEG00000019884) mrpl54 (ENSCSEG00000019883) malt2 (ENSCSEG00000019876) safb (ENSCSEG00000019870) lpl (ENSCSEG00000019858) ENSCSEG00000019852 ENSCSEG00000019847 tpm4a (ENSCSEG00000019835) ##22 ENSCSEG00000019823 ENSCSEG00000019820 RAB8A (ENSCSEG00000019816) HSH2D (ENSCSEG00000019815) tax1bp3 (ENSCSEG00000019813) slc1a6 (ENSCSEG00000019753) cherp (ENSCSEG00000019700) dohh (ENSCSEG00000019681) ENSCSEG00000019679 RSPH6A (ENSCSEG00000019676) LONP1 (ENSCSEG00000019655) ctns (ENSCSEG00000019653) TRAPPC8 (ENSCSEG00000019618) commd2 (ENSCSEG00000019609) lmnb2 (ENSCSEG00000019598) Turbot MODERN SPECIES 3 gna11a (ENSSMAG00000008940) gna15.4 (ENSSMAG00000031032) ENSSMAG00000028673 ENSSMAG00000008969 cdc34a (ENSSMAG00000033339) ap3d1 (ENSSMAG00000009006) hdgfl2 (ENSSMAG00000009191) ENSSMAG00000009218 mrpl54 (ENSSMAG00000009226) ENSSMAG00000009239 safb (ENSSMAG00000009316) lpl (ENSSMAG00000009483) ENSSMAG00000009524 ENSSMAG00000009354 ENSSMAG00000038073 TPM4 (ENSSMAG00000009555) ##22 ENSSMAG00000009584 ENSSMAG00000009593 HSH2D (ENSSMAG00000009603) tax1bp3 (ENSSMAG00000009626) slc1a6 (ENSSMAG00000009637) ENSSMAG00000009647 pole4 (ENSSMAG00000037852) ENSSMAG00000009677 ccl25b (ENSSMAG00000036952) ENSSMAG00000009720 mpnd (ENSSMAG00000009752) sh3gl1b (ENSSMAG00000009840) rorca (ENSSMAG00000009897) ENSSMAG00000009913 plin3 (ENSSMAG00000009950) Otomorpha ANCESTRAL SPECIES 31 ENSGT00940000160775 ENSGT00940000163917.a.a ENSGT00730000111147 ENSGT00390000002505 ENSGT00950000182915.b.b.a.b.d ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000165061 ENSGT00940000166556 ENSGT00940000157178.h ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00390000002877 ENSGT00940000159972 ENSGT01030000235192 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00390000005338 ENSGT00940000169448 ENSGT00950000182993.A.a.i ENSGT00390000012434 ENSGT00390000007212 ENSGT00940000165636 ENSGT00530000063553.b.a ENSGT00390000011943.b ENSGT00940000160274 Clupeiformes ANCESTRAL SPECIES 9 ENSGT00940000160775 ENSGT00940000163917.a.a ENSGT00730000111147 ENSGT00390000002505 ENSGT00950000182915.b.b.a.b.d ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000165061 ENSGT00940000166556 ENSGT00940000157178.h ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000161678 ENSGT00940000154108.a.d.f ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00390000005338 ENSGT00940000158588 ENSGT00950000182993.A.a.i ENSGT00390000012434 ENSGT00390000007212 ENSGT00940000165636 ENSGT00530000063553.b.a ENSGT00390000011943.b Denticle herring MODERN SPECIES 4 ATCAY (ENSDCDG00000026997) ENSDCDG00000026637 rx1 (ENSDCDG00000026630) cherp (ENSDCDG00000026616) ENSDCDG00000026607 rad23ab (ENSDCDG00000026602) EPS15L1 (ENSDCDG00000026449) klf2a (ENSDCDG00000026436) fam32a (ENSDCDG00000026435) mrpl54 (ENSDCDG00000026434) malt2 (ENSDCDG00000026429) safb (ENSDCDG00000026422) ENSDCDG00000026419 ENSDCDG00000026417 lpl (ENSDCDG00000026297) tpm4a (ENSDCDG00000025761) ##22 ENSDCDG00000025741 tax1bp3 (ENSDCDG00000025738) slc1a6 (ENSDCDG00000023596) pole4 (ENSDCDG00000023518) ENSDCDG00000023513 ccl25b (ENSDCDG00000023510) ctns (ENSDCDG00000023504) RANBP3 (ENSDCDG00000023497) ENSDCDG00000023492 ndufa11 (ENSDCDG00000023489) VMAC (ENSDCDG00000023485) larp6b (ENSDCDG00000023482) LONP1 (ENSDCDG00000022685) rpl36 (ENSDCDG00000022659) lmnb2 (ENSDCDG00000022485) Otophysi ANCESTRAL SPECIES 3 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00940000157143.c.a ENSGT00390000007310 ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000165061 ENSGT00940000166556 ENSGT00940000157178.h ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000161678 ENSGT00460000041630 ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00530000063816.d ENSGT00390000003020 ENSGT00950000182988.a.a.b ENSGT00390000017679 ENSGT00390000016356 ENSGT00940000158159 ENSGT00390000017571 ENSGT00940000162118 ENSGT00940000163206.b.a.a ENSGT00940000160274 ENSGT00390000011943.b Characiphysae ANCESTRAL SPECIES 28 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00940000157143.c.a ENSGT00390000007310 ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000165061 ENSGT00940000166556 ENSGT00940000157178.h ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000161678 ENSGT00460000041630 ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00530000063816.d ENSGT00390000003020 ENSGT00950000182988.a.a.b ENSGT00390000017679 ENSGT00390000016356 ENSGT00940000158159 ENSGT00390000017571 ENSGT00940000162118 ENSGT00940000163206.b.a.a ENSGT00940000160274 ENSGT00390000011943.b Characiphysae_b ANCESTRAL SPECIES 25 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00940000157143.c.a ENSGT00390000007310 ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000165061 ENSGT00940000166556 ENSGT00940000157178.h ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000161678 ENSGT00460000041630 ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00530000063816.d ENSGT00390000003020 ENSGT00950000182988.a.a.b ENSGT00390000017679 ENSGT00390000016356 ENSGT00940000158159 ENSGT00390000017571 ENSGT00940000162118 ENSGT00940000163206.b.a.a ENSGT00940000160274 ENSGT00390000011943.b Characoidei ANCESTRAL SPECIES 26 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00940000157143.c.a ENSGT00390000007310 ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000165061 ENSGT00940000166556 ENSGT00940000157178.h ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000161678 ENSGT00460000041630 ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00530000063816.d ENSGT00390000003020 ENSGT00950000182988.a.a.b ENSGT00390000017679 ENSGT00390000016356 ENSGT00940000158159 ENSGT00390000017571 ENSGT00940000163206.b.a.a ENSGT00940000160274 ENSGT00390000011943.b ENSGT00530000063553.b.a Red-bellied piranha MODERN SPECIES 27 ENSPNAG00000021389 ngfa (ENSPNAG00000021405) ENSPNAG00000021455 slc25a55b (ENSPNAG00000021491) TSHB (ENSPNAG00000021505) ENSPNAG00000021509 ENSPNAG00000021513 ap4b1 (ENSPNAG00000021523) BLTP3A (ENSPNAG00000021546) taf11 (ENSPNAG00000021557) ANKS1A (ENSPNAG00000021680) safb (ENSPNAG00000021838) ENSPNAG00000021890 ENSPNAG00000021936 lpl (ENSPNAG00000021960) tpm4a (ENSPNAG00000022014) ##22 hsh2d (ENSPNAG00000022029) ENSPNAG00000022049 gpc1a (ENSPNAG00000022074) gpc5b (ENSPNAG00000022094) ENSPNAG00000022124 aqp12 (ENSPNAG00000022146) rpp21 (ENSPNAG00000022186) pak2b (ENSPNAG00000022217) pigx (ENSPNAG00000022229) cep19 (ENSPNAG00000022237) ing5a (ENSPNAG00000022278) impact (ENSPNAG00000022290) ENSPNAG00000022302 lmnb2 (ENSPNAG00000022321) rpl36 (ENSPNAG00000022340) Mexicana tetra MODERN SPECIES 20 rfxank (ENSAMXG00000037392) ENSAMXG00000037896 borcs8 (ENSAMXG00000042276) mef2b (ENSAMXG00000036998) ENSAMXG00000032225 tmem161a (ENSAMXG00000031277) gatad2ab (ENSAMXG00000035363) yjefn3 (ENSAMXG00000015707) CILP2 (ENSAMXG00000015685) ENSAMXG00000015658 cirbpb (ENSAMXG00000015612) midn (ENSAMXG00000015589) atp5f1d (ENSAMXG00000015570) CBARP (ENSAMXG00000033145) fstl3 (ENSAMXG00000037779) tpm4a (ENSAMXG00000036267) ##22 hsh2d (ENSAMXG00000040655) ENSAMXG00000015434 gpc1a (ENSAMXG00000015392) gpc5b (ENSAMXG00000015368) ENSAMXG00000036406 aqp12 (ENSAMXG00000032995) rlbp1a (ENSAMXG00000038590) slc39a1 (ENSAMXG00000036608) ENSAMXG00000015268 furina (ENSAMXG00000034473) fes (ENSAMXG00000015161) rhcga (ENSAMXG00000015098) rhcga (ENSAMXG00000035292) psmd14 (ENSAMXG00000002142) RBMS1 (ENSAMXG00000002146) Electric eel MODERN SPECIES 89 dph5 (ENSEEEG00000015348) s1pr1 (ENSEEEG00000015352) zbtb37 (ENSEEEG00000015354) serpinc1 (ENSEEEG00000015359) rc3h1a (ENSEEEG00000015466) stil (ENSEEEG00000015467) EPS15L1 (ENSEEEG00000015471) klf2a (ENSEEEG00000015692) fam32a (ENSEEEG00000015694) mrpl54 (ENSEEEG00000015695) malt2 (ENSEEEG00000015696) safb (ENSEEEG00000015699) ENSEEEG00000015705 ENSEEEG00000015721 lpl (ENSEEEG00000015950) tpm4a (ENSEEEG00000016378) ##22 hsh2d (ENSEEEG00000016589) ENSEEEG00000016596 gpc1a (ENSEEEG00000016602) gpc5b (ENSEEEG00000016604) aqp12 (ENSEEEG00000016608) rpp21 (ENSEEEG00000016609) PIP5K1C (ENSEEEG00000016611) ENSEEEG00000016614 marchf2 (ENSEEEG00000016647) hnrnpm (ENSEEEG00000016654) ifi44f5 (ENSEEEG00000016708) RABGAP1L (ENSEEEG00000016729) FAM163A (ENSEEEG00000016965) ENSEEEG00000016967 nphs2 (ENSEEEG00000016969) ##34 Channel catfish MODERN SPECIES 1 SLC30A7 (ENSIPUG00000024818) dph5 (ENSIPUG00000024822) s1pr1 (ENSIPUG00000024823) zbtb37 (ENSIPUG00000024825) SERPINC1 (ENSIPUG00000024827) RC3H1 (ENSIPUG00000024829) stil (ENSIPUG00000024834) eps15l1 (ENSIPUG00000024839) Klf2 (ENSIPUG00000024844) fam32a (ENSIPUG00000024852) mrpl54 (ENSIPUG00000024854) malt2 (ENSIPUG00000024856) safb2 (ENSIPUG00000024869) ENSIPUG00000024876 lpl (ENSIPUG00000024879) tpm4 (ENSIPUG00000024888) ##22 ENSIPUG00000024898 hsh2d (ENSIPUG00000024899) ankmy1 (ENSIPUG00000024900) gpc1 (ENSIPUG00000024906) gpc5b (ENSIPUG00000024908) rpp21 (ENSIPUG00000024910) Aqp12 (ENSIPUG00000024912) PAK2 (ENSIPUG00000024915) pigx (ENSIPUG00000024918) cep19 (ENSIPUG00000024921) Ing5 (ENSIPUG00000024919) impact-B (ENSIPUG00000024923) hrh4 (ENSIPUG00000024928) lmnb2 (ENSIPUG00000024929) ENSIPUG00000024932 Cyprinoidei ANCESTRAL SPECIES 39 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00940000157143.c.a ENSGT00390000007310 ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000165061 ENSGT00940000166556 ENSGT00940000157178.h ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00460000041630 ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000003020 ENSGT00390000003866.a.a.f ENSGT00530000064271 ENSGT00940000156772.b.c.a.c ENSGT00940000156772.b.c.a.d ENSGT00940000159564 ENSGT00940000159737.c ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00940000163716.d ENSGT00940000154856.A.b ENSGT00950000183114.a.b.b.gb.a Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 281 ENSGT00390000010568.m ENSGT01050000244887.A.a.b.e.b ENSGT00940000159554.c ENSGT00940000157967.a.a ENSGT00940000157143.c.a.b ENSGT00390000007310.a ENSGT00940000155438.b.`b ENSGT00940000164495.c.b.a ENSGT00390000013811.ub ENSGT00390000001201.b ENSGT00390000018044.b.b.d ENSGT00940000155916.v ENSGT00940000165061.c ENSGT00940000166556.c ENSGT00940000157178.h.b ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.c.a ##22 ENSGT00940000161678.b.a ENSGT01050000244897.a.a.b.b.e ENSGT01050000244955.b.c.b ENSGT00390000003020.a.b Goldfish DUPLICATION Goldfish MODERN SPECIES 14 ENSCARG00000022126 ENSCARG00000022123 aox5 (ENSCARG00000011547) ENSCARG00000011162 bzw1a (ENSCARG00000011114) ENSCARG00000011108 ENSCARG00000011084 gtpbp1l (ENSCARG00000010802) ENSCARG00000010782 mrpl54 (ENSCARG00000010770) malt2 (ENSCARG00000010760) safb (ENSCARG00000010750) ENSCARG00000010719 ENSCARG00000010680 lpl (ENSCARG00000009834) tpm4a (ENSCARG00000009448) ##22 hsh2d (ENSCARG00000009418) gpc1a (ENSCARG00000009394) gpc5b (ENSCARG00000009376) rpp21 (ENSCARG00000009367) hsh2d (ENSCARG00000009363) tpm4a (ENSCARG00000009212) ##22 lpl (ENSCARG00000008413) ENSCARG00000008344 ENSCARG00000008307 safb (ENSCARG00000008286) malt2 (ENSCARG00000008260) mrpl54 (ENSCARG00000008248) fam32a (ENSCARG00000008239) klf2a (ENSCARG00000008229) EPS15L1 (ENSCARG00000006816) Goldfish MODERN SPECIES 14 dph5 (ENSCARG00000006679) s1pr1 (ENSCARG00000006702) zbtb37 (ENSCARG00000006704) serpinc1 (ENSCARG00000006709) rc3h1a (ENSCARG00000006724) stil (ENSCARG00000006754) EPS15L1 (ENSCARG00000006816) klf2a (ENSCARG00000008229) fam32a (ENSCARG00000008239) mrpl54 (ENSCARG00000008248) malt2 (ENSCARG00000008260) safb (ENSCARG00000008286) ENSCARG00000008307 ENSCARG00000008344 lpl (ENSCARG00000008413) tpm4a (ENSCARG00000009212) ##22 hsh2d (ENSCARG00000009363) rpp21 (ENSCARG00000009367) gpc5b (ENSCARG00000009376) gpc1a (ENSCARG00000009394) hsh2d (ENSCARG00000009418) tpm4a (ENSCARG00000009448) ##22 lpl (ENSCARG00000009834) ENSCARG00000010680 ENSCARG00000010719 safb (ENSCARG00000010750) malt2 (ENSCARG00000010760) mrpl54 (ENSCARG00000010770) ENSCARG00000010782 gtpbp1l (ENSCARG00000010802) ENSCARG00000011084 Cyprininae_a ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.c.a ##22 Golden-line barbel MODERN SPECIES 97 slc30a7 (ENSSGRG00000037650) dph5 (ENSSGRG00000037777) s1pr1 (ENSSGRG00000037782) zbtb37 (ENSSGRG00000037783) serpinc1 (ENSSGRG00000037784) rc3h1a (ENSSGRG00000037795) EPS15L1 (ENSSGRG00000037810) klf2a (ENSSGRG00000038223) fam32a (ENSSGRG00000038225) mrpl54 (ENSSGRG00000038227) malt2 (ENSSGRG00000038228) safb (ENSSGRG00000038230) ENSSGRG00000038231 ENSSGRG00000038332 lpl (ENSSGRG00000038560) tpm4a (ENSSGRG00000039104) ##22 hsh2d (ENSSGRG00000039906) ENSSGRG00000039908 gpc1a (ENSSGRG00000039910) gpc5b (ENSSGRG00000039912) rpp21 (ENSSGRG00000039913) tmem264 (ENSSGRG00000039914) Cyprininae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.c.b ##22 Cyprininae_a ANCESTRAL SPECIES 246 ENSGT00940000159571.f ENSGT00390000010568.m ENSGT01050000244887.A.a.b.e.b ENSGT00940000159554.c ENSGT00940000157967.a.a ENSGT00940000157143.c.a.b ENSGT00390000007310.a ENSGT00940000155438.b.`b ENSGT00940000164495.c.b.a ENSGT00390000013811.ub ENSGT00390000018044.b.b.d ENSGT00940000155916.v ENSGT00940000165061.c ENSGT00940000166556.c ENSGT00940000157178.h.b ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.c.b ##22 ENSGT00940000161678.b.a ENSGT01050000244897.a.a.b.b.e ENSGT01050000244955.b.c.b ENSGT00390000003020.a.b ENSGT00390000003866.a.a.f.a ENSGT00530000064271 ENSGT00940000156772.b.c.a.c.c.a.a.a ENSGT00940000156772.b.c.a.c.c.b ENSGT00940000159564.a ENSGT00940000159737.c.b Golden-line barbel MODERN SPECIES 796 mrpl54 (ENSSGRG00000021272) safb (ENSSGRG00000021277) ENSSGRG00000021282 ENSSGRG00000021284 lpl (ENSSGRG00000021374) tpm4a (ENSSGRG00000022943) ##22 hsh2d (ENSSGRG00000023549) ENSSGRG00000023550 gpc1a (ENSSGRG00000023559) gpc5b (ENSSGRG00000023563) ENSSGRG00000023568 tmem264 (ENSSGRG00000023585) rrp36 (ENSSGRG00000023586) ENSSGRG00000023587 ENSSGRG00000023588 ENSSGRG00000023589 ENSSGRG00000023597 mfng (ENSSGRG00000023598) ELFN2 (ENSSGRG00000023607) ENSSGRG00000023608 ENSSGRG00000023611 Goldfish MODERN SPECIES 41 ENSCARG00000035188 vcam1b (ENSCARG00000035179) slc30a7 (ENSCARG00000035071) dph5 (ENSCARG00000034839) zbtb37 (ENSCARG00000034814) serpinc1 (ENSCARG00000034801) rc3h1a (ENSCARG00000034767) stil (ENSCARG00000034748) EPS15L1 (ENSCARG00000030274) klf2a (ENSCARG00000030178) fam32a (ENSCARG00000030167) mrpl54 (ENSCARG00000030155) malt2 (ENSCARG00000030089) safb (ENSCARG00000030027) lpl (ENSCARG00000028130) tpm4a (ENSCARG00000026225) ##22 hsh2d (ENSCARG00000026175) ENSCARG00000026123 gpc1a (ENSCARG00000026069) gpc5b (ENSCARG00000026049) rpp21 (ENSCARG00000050593) ENSCARG00000050522 ENSCARG00000050496 mfng (ENSCARG00000050482) ELFN2 (ENSCARG00000050474) ENSCARG00000050457 gtpbp1l (ENSCARG00000050129) ENSCARG00000049903 ENSCARG00000049816 ENSCARG00000049808 bzw1a (ENSCARG00000049676) Cyprininae ANCESTRAL SPECIES 11 ENSGT00390000010568.n ENSGT01050000244887.A.a.b.f ENSGT00940000159554.d ENSGT00940000157967.a.b ENSGT00940000157143.c.a.a ENSGT00390000007310.b ENSGT00940000155438.b.ab ENSGT00940000164495.c.b.b ENSGT00390000013811.vb ENSGT00390000001201.a ENSGT00390000018044.b.b.c ENSGT00940000155916.u ENSGT00940000165061.d ENSGT00940000166556.d ENSGT00940000157178.h.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.d ##22 ENSGT00940000161678.b.b ENSGT00460000041630 ENSGT01050000244897.a.a.b.b.f ENSGT01050000244955.b.c.a ENSGT00390000003020.a.a ENSGT00390000003020.b ENSGT00390000003866.a.a.f ENSGT00530000064271 ENSGT00940000156772.b.c.a.c.c.a.a.a ENSGT00940000156772.b.c.a.c.c.a.a.b ENSGT00940000156772.b.c.a.d ENSGT00940000159564.b ENSGT00940000159737.c.a ENSGT00940000156054.d.i.a ENSGT00940000157521.a.b.e Cyprininae_a ANCESTRAL SPECIES 91 ENSGT01050000244887.A.a.b.e.a ENSGT00940000157967.b ENSGT00940000159554.d ENSGT00940000157967.a.b ENSGT00940000157143.c.a.a ENSGT00390000007310.b ENSGT00940000155438.b.ab ENSGT00940000164495.c.b.b ENSGT00390000013811.vb ENSGT00390000001201.a ENSGT00390000018044.b.b.c ENSGT00940000155916.u ENSGT00940000165061.d ENSGT00940000166556.d ENSGT00940000157178.h.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.d ##22 ENSGT00940000161678.b.b ENSGT00460000041630 ENSGT01050000244897.a.a.b.b.f ENSGT01050000244955.b.c.a ENSGT00390000003020.a.a ENSGT00390000003866.a.a.f.b ENSGT00940000156772.b.c.a.c.c.a.a.b ENSGT00940000159564.b ENSGT00940000159737.c.a ENSGT00940000156054.d.i.a ENSGT00940000157521.a.b.e ENSGT00940000167103.a ENSGT00940000166136.a ENSGT00390000012561.b.pb.b.b ENSGT00940000154856.A.b.r.b.b Common carp reference MODERN SPECIES 43 vcam1b (ENSCCRG00000010179) slc30a7 (ENSCCRG00000023567) dph5 (ENSCCRG00000010163) s1pr1 (ENSCCRG00000061185) serpinc1 (ENSCCRG00000080480) zbtb37 (ENSCCRG00000009936) rc3h1a (ENSCCRG00000010153) stil (ENSCCRG00000071630) klf2a (ENSCCRG00000009893) ENSCCRG00000009967 fam32a (ENSCCRG00000007951) malt2 (ENSCCRG00000007934) safb (ENSCCRG00000059508) ENSCCRG00000006250 lpl (ENSCCRG00000076088) tpm4a (ENSCCRG00000081231) ##22 hsh2d (ENSCCRG00000079562) ENSCCRG00000006188 gpc1a (ENSCCRG00000006180) gpc5b (ENSCCRG00000081777) rpp21 (ENSCCRG00000066950) tmem264 (ENSCCRG00000064092) ENSCCRG00000031896 ENSCCRG00000008871 ENSCCRG00000080246 mfng (ENSCCRG00000038426) ENSCCRG00000066886 gtpbp1l (ENSCCRG00000072611) ENSCCRG00000053356 ENSCCRG00000074068 ENSCCRG00000004323 Zebrafish MODERN SPECIES 14 s1pr1 (ENSDARG00000042690) zbtb37 (ENSDARG00000042689) serpinc1 (ENSDARG00000042684) rc3h1a (ENSDARG00000062550) stil (ENSDARG00000024904) EPS15L1 (ENSDARG00000042670) klf2a (ENSDARG00000042667) ENSDARG00000042663 fam32a (ENSDARG00000042660) mrpl54 (ENSDARG00000071468) malt2 (ENSDARG00000006052) safb (ENSDARG00000020467) ENSDARG00000057590 ENSDARG00000034667 lpl (ENSDARG00000087697) tpm4a (ENSDARG00000023963) ##22 hsh2d (ENSDARG00000042908) ENSDARG00000062702 gpc1a (ENSDARG00000019341) gpc5b (ENSDARG00000024588) rpp21 (ENSDARG00000043404) tmem264 (ENSDARG00000062712) rrp36 (ENSDARG00000032516) sult3st2 (ENSDARG00000093619) sult3st4 (ENSDARG00000040781) sult3st5 (ENSDARG00000071495) sult3st3 (ENSDARG00000042920) ENSDARG00000094089 mfng (ENSDARG00000042925) ELFN2 (ENSDARG00000077609) gtpbp1l (ENSDARG00000042900) Osteoglossocephalai ANCESTRAL SPECIES 904 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 Osteoglossiformes ANCESTRAL SPECIES 243 ENSGT00940000166556.f ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000160888 ENSGT00940000165287.a.a ENSGT00940000165287.b ENSGT00900000141362.a.a.a ENSGT00940000158588.a ENSGT00950000182993.A.a.j.a ENSGT00390000012434 ENSGT00940000165636 ENSGT00530000063553.b.a ENSGT00390000006166.a P. kingsleyae MODERN SPECIES 17 mydgf (ENSPKIG00000000657) cope (ENSPKIG00000000623) loxl5b (ENSPKIG00000000573) ATCAY (ENSPKIG00000000549) ZFR2 (ENSPKIG00000000524) cplx4c (ENSPKIG00000000506) ENSPKIG00000000493 cherp (ENSPKIG00000000423) ENSPKIG00000000371 ENSPKIG00000000357 ENSPKIG00000000340 ENSPKIG00000000275 ENSPKIG00000000256 ENSPKIG00000000228 LPL (ENSPKIG00000000174) ENSPKIG00000000130 ##22 ENSPKIG00000000101 CIB3 (ENSPKIG00000000074) admp (ENSPKIG00000000061) pnhd (ENSPKIG00000000043) pole4 (ENSPKIG00000000035) ENSPKIG00000000030 ENSPKIG00000000017 ranbp3b (ENSPKIG00000025677) NRTN (ENSPKIG00000025612) ndufa11 (ENSPKIG00000025615) larp6b (ENSPKIG00000025605) LONP1 (ENSPKIG00000025624) ABHD8 (ENSPKIG00000025627) dda1 (ENSPKIG00000025602) ENSPKIG00000025671 Clupeocephala ANCESTRAL SPECIES 4 ENSGT00940000154779.a.a.d ENSGT00940000165007.b ENSGT00940000158364.b ENSGT00970000198139 ENSGT00940000162148 ENSGT00940000160775 ENSGT00940000163917.a.a ENSGT00730000111147 ENSGT00390000002505 ENSGT00950000182915.b.b.a.b.c.a ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00940000157924 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00940000165287.b ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00510000048500 ENSGT00940000156466 ENSGT00390000018651.a ENSGT00950000182993.A.a.j ENSGT00390000007918 ENSGT00390000006320 ENSGT00940000161387 Euteleosteomorpha ANCESTRAL SPECIES 46 ENSGT00940000154779.a.a.d ENSGT00940000165007.b ENSGT00940000158364.b ENSGT00970000198139 ENSGT00940000162148 ENSGT00940000160775 ENSGT00940000163917.a.a ENSGT00730000111147 ENSGT00390000002505 ENSGT00950000182915.b.b.a.b.c.a ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00940000157924 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00940000165287.b ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000008557 ENSGT00390000002727 Protacanthopterygii ANCESTRAL SPECIES 32 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a.d.a ENSGT00940000164530 ENSGT00940000156845.nc.b ENSGT00940000156845.nc.a ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b.c ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466.c ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00390000002727 ENSGT00390000008557 ENSGT00390000008279.a ENSGT00390000014384 ENSGT00940000158291 ENSGT00940000155060.C.a.a ENSGT00950000182993.A.a.j ENSGT01100000264009 ENSGT00940000154992.a.a Salmoninae ANCESTRAL SPECIES 412 ENSGT00510000047872.t ENSGT00940000158753.g.b ENSGT00940000157375.d.c ENSGT00940000155404.i.a.d.b.b.b.a.a ENSGT00940000164530.d.a ENSGT00940000156845.nc.a.b ENSGT00940000154779.a.a.c.h ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b.c.a ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a.o ENSGT00940000164495.c.a.f ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a.f ENSGT00940000160466.c ENSGT00940000165287.a.a ENSGT00390000005847.f ENSGT00940000165063 Salmoninae_a ANCESTRAL SPECIES 51 ENSGT00510000047872.t ENSGT00940000158753.g.b ENSGT00940000157375.d.c ENSGT00940000155404.i.a.d.b.b.b.a.a ENSGT00940000164530.d.a ENSGT00940000156845.nc.a.b ENSGT00940000154779.a.a.c.h ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b.c.a ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a.o ENSGT00940000164495.c.a.f ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a.f ENSGT00940000160466.c ENSGT00940000165287.a.a ENSGT00390000005847.f ENSGT00940000165063 ENSGT00900000141362.a.a ENSGT00940000158588.d.b.b ENSGT00940000177219.d ENSGT01100000263505.b.b.a.b.a.a.b ENSGT00940000162287.A.j.c.b ENSGT00940000161979.B.o ENSGT00940000154446.b.a.a.b.a.a ENSGT00390000002727 ENSGT00390000008557 ENSGT00390000008279.a Salmo ANCESTRAL SPECIES 21 ENSGT00510000047872.t ENSGT00940000158753.g.b ENSGT00940000157375.d.c ENSGT00940000155404.i.a.d.b.a ENSGT00940000164530.d.a ENSGT00940000156845.nc.a.b ENSGT00940000154779.a.a.c.h ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b.c.a ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a.o ENSGT00940000164495.c.a.f ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a.f ENSGT00940000160466.c ENSGT00940000165287.a.a ENSGT00390000005847.f ENSGT00940000165063 ENSGT00900000141362.a.a ENSGT00940000158588.d.b.b ENSGT00940000168692.i.a ENSGT00940000161979.B.o ENSGT00940000154446.b.a.a.b.a.a ENSGT00390000002727 ENSGT00390000008557 ENSGT00390000008279.a ENSGT00390000014384 ENSGT00940000158291 River trout MODERN SPECIES 13 sppl2 (ENSSTUG00000040470) arhgef18a (ENSSTUG00000041286) insra (ENSSTUG00000041599) mfsd14a2 (ENSSTUG00000045838) ENSSTUG00000046087 ENSSTUG00000046101 loxl5b (ENSSTUG00000046169) nmrk2 (ENSSTUG00000046177) ATCAY (ENSSTUG00000046207) cplx4c (ENSSTUG00000046236) rx2 (ENSSTUG00000046240) ENSSTUG00000046247 ENSSTUG00000046354 klf2b (ENSSTUG00000047295) LPL (ENSSTUG00000047301) TPM4 (ENSSTUG00000047318) ##22 rab8a (ENSSTUG00000047345) CIB3 (ENSSTUG00000047349) ENSSTUG00000047353 admp (ENSSTUG00000047354) ENSSTUG00000047357 ranbp3b (ENSSTUG00000047369) ENSSTUG00000023084 ENSSTUG00000023146 ENSSTUG00000023161 lrrc42 (ENSSTUG00000023167) LDLRAD1 (ENSSTUG00000023187) tmem59 (ENSSTUG00000023199) tceanc2 (ENSSTUG00000023219) CDCP2 (ENSSTUG00000023231) ENSSTUG00000023256 Atlantic salmon MODERN SPECIES 5 ENSSSAG00000122003 insra (ENSSSAG00000043568) mfsd14a2 (ENSSSAG00000047924) ENSSSAG00000053891 loxl5b (ENSSSAG00000058421) NRK2 (ENSSSAG00000058436) ENSSSAG00000058448 rx2 (ENSSSAG00000083843) ENSSSAG00000089063 ENSSSAG00000058499 ENSSSAG00000059374 ENSSSAG00000094895 klf2b (ENSSSAG00000064886) ENSSSAG00000103555 ENSSSAG00000064905 TPM4 (ENSSSAG00000064967) ##22 rab8a (ENSSSAG00000110185) ENSSSAG00000086785 cib3 (ENSSSAG00000094870) ENSSSAG00000065092 ENSSSAG00000065104 ENSSSAG00000065115 ENSSSAG00000065129 ENSSSAG00000065165 ENSSSAG00000104508 ENSSSAG00000065230 zbt17 (ENSSSAG00000065264) ENSSSAG00000091190 ENSSSAG00000065284 lrrc42 (ENSSSAG00000005854) LDLRAD1 (ENSSSAG00000112729) Oncorhynchus ANCESTRAL SPECIES 46 ENSGT00510000047872.t ENSGT00940000158753.g.b ENSGT00940000157375.d.c ENSGT00940000155404.i.a.d.b.b.b.a.a ENSGT00940000164530.d.a ENSGT00940000156845.nc.a.b ENSGT00940000154779.a.a.c.h ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b.c.a ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a.o ENSGT00940000164495.c.a.f ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a.f ENSGT00940000160466.c ENSGT00940000165287.a.a ENSGT00390000005847.f ENSGT00940000165063 ENSGT00900000141362.a.a ENSGT00940000158588.d.b.b ENSGT00940000177219.d ENSGT00940000162287.A.j.c.b ENSGT00940000161979.B.o ENSGT00940000154446.b.a.a.b.a.a ENSGT00390000002727 ENSGT00390000008557 ENSGT00390000008279.a ENSGT00390000014384 Rainbow trout MODERN SPECIES 29 ENSOMYG00000057876 ENSOMYG00000077376 ENSOMYG00000048030 ENSOMYG00000075158 ENSOMYG00000077739 loxl5b (ENSOMYG00000001888) nmrk2 (ENSOMYG00000001951) ENSOMYG00000001977 cplx4c (ENSOMYG00000002014) rx2 (ENSOMYG00000002048) ENSOMYG00000037630 ENSOMYG00000002199 ENSOMYG00000002314 klf2b (ENSOMYG00000002347) ENSOMYG00000077268 TPM4 (ENSOMYG00000002709) ##22 rab8a (ENSOMYG00000002743) ENSOMYG00000072305 ENSOMYG00000069911 CIB3 (ENSOMYG00000002758) ENSOMYG00000002773 ENSOMYG00000002796 ENSOMYG00000002806 ENSOMYG00000069047 ENSOMYG00000002876 ENSOMYG00000002994 ENSOMYG00000064336 ENSOMYG00000003028 ENSOMYG00000003038 LRRC42 (ENSOMYG00000003047) LDLRAD1 (ENSOMYG00000050330) Oncorhynchus_a ANCESTRAL SPECIES 56 ENSGT00510000047872.t ENSGT00940000158753.g.b ENSGT00940000157375.d.c ENSGT00940000155404.i.a.d.b.b.b.a.a ENSGT00940000164530.d.a ENSGT00940000156845.nc.a.b ENSGT00940000154779.a.a.c.h ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b.c.a ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a.o ENSGT00940000164495.c.a.f ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a.f ENSGT00940000160466.c ENSGT00940000165287.a.a ENSGT00390000005847.f ENSGT00940000165063 ENSGT00900000141362.a.a ENSGT00940000158588.d.b.b ENSGT00940000177219.d ENSGT00390000002727 ENSGT00390000008557 ENSGT00390000008279.a ENSGT00390000014384 ENSGT00940000158291 ENSGT00940000155060.C.a.a ENSGT00950000182993.A.a.j Coho salmon MODERN SPECIES 23 LSM7 (ENSOKIG00005033425) sppl2 (ENSOKIG00005033579) arhgef18a (ENSOKIG00005034541) insra (ENSOKIG00005034602) mfsd14a2 (ENSOKIG00005035644) ENSOKIG00005036135 loxl5b (ENSOKIG00005036426) nmrk2 (ENSOKIG00005036477) ATCAY (ENSOKIG00005036502) cplx4c (ENSOKIG00005036514) rx2 (ENSOKIG00005036527) ENSOKIG00005036578 ENSOKIG00005037416 klf2b (ENSOKIG00005037911) LPL (ENSOKIG00005037933) ENSOKIG00005037969 ##22 rab8a (ENSOKIG00005038077) CIB3 (ENSOKIG00005038110) ENSOKIG00005038161 ENSOKIG00005038169 admp (ENSOKIG00005038193) ENSOKIG00005038203 RANBP3 (ENSOKIG00005038219) ENSOKIG00005038254 ENSOKIG00005038281 lrrc42 (ENSOKIG00005038302) LDLRAD1 (ENSOKIG00005038330) tmem59 (ENSOKIG00005038352) tceanc2 (ENSOKIG00005038370) CDCP2 (ENSOKIG00005038380) ENSOKIG00005038387 Northern pike MODERN SPECIES 2 sppl2 (ENSELUG00000013526) arhgef18a (ENSELUG00000013597) insra (ENSELUG00000013713) mfsd14a2 (ENSELUG00000013771) ENSELUG00000013827 loxl5b (ENSELUG00000013872) nmrk2 (ENSELUG00000013939) ATCAY (ENSELUG00000013996) cplx4c (ENSELUG00000014015) rx2 (ENSELUG00000014048) ENSELUG00000014098 ENSELUG00000014207 klf2b (ENSELUG00000014262) ap1m1 (ENSELUG00000014308) LPL (ENSELUG00000014351) ENSELUG00000014399 ##22 CIB3 (ENSELUG00000014416) rab8a (ENSELUG00000034094) admp (ENSELUG00000014468) pnhd (ENSELUG00000014481) ENSELUG00000014506 ENSELUG00000014541 ranbp3b (ENSELUG00000014572) ENSELUG00000014586 lrrc42 (ENSELUG00000014595) tmem59 (ENSELUG00000014611) tceanc2 (ENSELUG00000014656) CDCP2 (ENSELUG00000014641) ENSELUG00000027575 ptprfb (ENSELUG00000000543) ENSELUG00000014752 Acanthomorphata ANCESTRAL SPECIES ENSGT00940000161753 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00940000165287.b ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Euacanthomorphacea ANCESTRAL SPECIES 4 ENSGT00940000153424.a.a.d ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00940000165287.b ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 Percomorphaceae ANCESTRAL SPECIES 6 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00950000182915.b.b.a.b.c.a ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00940000165287.b ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 Percomorphaceae_B ANCESTRAL SPECIES 8 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00690000103893 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Percomorphaceae_C ANCESTRAL SPECIES 6 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00690000103893 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Eupercaria ANCESTRAL SPECIES 24 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00690000103893 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Eupecaria_A ANCESTRAL SPECIES 8 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00690000103893 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Eupecaria_B ANCESTRAL SPECIES 8 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00690000103893 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Eupecaria_C ANCESTRAL SPECIES 26 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Gilthead seabream MODERN SPECIES 13 loxl5b (ENSSAUG00010026900) nmrk2 (ENSSAUG00010026899) ATCAY (ENSSAUG00010026897) ENSSAUG00010026896 rx2 (ENSSAUG00010026895) DNAH8 (ENSSAUG00010026887) ENSSAUG00010026872 ENSSAUG00010026860 ENSSAUG00010026858 ap1m1 (ENSSAUG00010026856) rab8a (ENSSAUG00010026850) CIB3 (ENSSAUG00010026848) ENSSAUG00010026844 admp (ENSSAUG00010026841) pnhd (ENSSAUG00010026837) ENSSAUG00010026781 ##22 CCL21 (ENSSAUG00010026773) ranbp3b (ENSSAUG00010026765) NRTN (ENSSAUG00010026761) ENSSAUG00010026758 ptprfb (ENSSAUG00010024954) CDCP2 (ENSSAUG00010024892) tceanc2 (ENSSAUG00010024891) tmem59 (ENSSAUG00010024890) lrrc42 (ENSSAUG00010024889) yipf1 (ENSSAUG00010024888) zgc:113691 (ENSSAUG00010024886) ndc1 (ENSSAUG00010024870) DCAF8 (ENSSAUG00010024683) vav3b (ENSSAUG00010024505) NTNG1 (ENSSAUG00010024500) Eupercaria_incertae_sedis ANCESTRAL SPECIES 30 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a European seabass MODERN SPECIES ENSDLAG00005024667 sppl2 (ENSDLAG00005024680) arhgef18a (ENSDLAG00005002469) insra (ENSDLAG00005002895) mfsd14a2 (ENSDLAG00005005155) ENSDLAG00005005742 loxl5b (ENSDLAG00005005761) nmrk2 (ENSDLAG00005005781) ENSDLAG00005005799 ENSDLAG00005005910 rx2 (ENSDLAG00005005932) ENSDLAG00005006021 ENSDLAG00005007762 ENSDLAG00005034343 ap1m1 (ENSDLAG00005009875) TPM4 (ENSDLAG00005028686) ##22 rab8a (ENSDLAG00005031001) CIB3 (ENSDLAG00005032165) admp (ENSDLAG00005011421) ENSDLAG00005031371 ENSDLAG00005011442 ranbp3b (ENSDLAG00005011456) ENSDLAG00005011508 ENSDLAG00005011516 ENSDLAG00005011855 CDCP2 (ENSDLAG00005022623) TCEANC2 (ENSDLAG00005033498) tmem59 (ENSDLAG00005022629) LRRC42 (ENSDLAG00005022636) ndc1 (ENSDLAG00005032722) ENSDLAG00005022710 Large yellow croaker MODERN SPECIES 1 ENSLCRG00005011006 ENSLCRG00005011008 zgc:66427 (ENSLCRG00005011010) rps8a (ENSLCRG00005011011) ENSLCRG00005011012 ENSLCRG00005011017 loxl5b (ENSLCRG00005011157) nmrk2 (ENSLCRG00005011304) ATCAY (ENSLCRG00005011305) ENSLCRG00005011312 DNAH8 (ENSLCRG00005011437) ENSLCRG00005011462 ENSLCRG00005012049 ENSLCRG00005014824 ap1m1 (ENSLCRG00005014825) TPM4 (ENSLCRG00005014909) ##22 rab8a (ENSLCRG00005001473) CIB3 (ENSLCRG00005001499) admp (ENSLCRG00005001515) pnhd (ENSLCRG00005001522) ENSLCRG00005001542 ranbp3b (ENSLCRG00005001595) NRTN (ENSLCRG00005001991) ENSLCRG00005001994 ptprfb (ENSLCRG00005002316) CDCP2 (ENSLCRG00005018917) tceanc2 (ENSLCRG00005018918) tmem59 (ENSLCRG00005018919) lrrc42 (ENSLCRG00005018920) yipf1 (ENSLCRG00005018921) zgc:113691 (ENSLCRG00005018922) Perciformes ANCESTRAL SPECIES 5 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00690000103893 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Perciformes_a ANCESTRAL SPECIES 17 ENSGT00940000153497.E ENSGT00940000162952.d.b.b ENSGT00940000161753 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00940000163917.a.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Pike perch MODERN SPECIES 12 ENSSLUG00000024543 sppl2 (ENSSLUG00000024353) arhgef18a (ENSSLUG00000024303) insra (ENSSLUG00000023795) mfsd14a2 (ENSSLUG00000023580) ENSSLUG00000023194 loxl5b (ENSSLUG00000023134) nmrk2 (ENSSLUG00000023127) ENSSLUG00000023122 ATCAY (ENSSLUG00000023110) ENSSLUG00000023026 rx2 (ENSSLUG00000022991) ENSSLUG00000022021 klf2b (ENSSLUG00000021931) ap1m1 (ENSSLUG00000021921) TPM4 (ENSSLUG00000021784) ##22 rab8a (ENSSLUG00000021756) CIB3 (ENSSLUG00000021748) admp (ENSSLUG00000021741) pnhd (ENSSLUG00000021736) ENSSLUG00000021733 ranbp3b (ENSSLUG00000021708) NRTN (ENSSLUG00000021683) larp6b (ENSSLUG00000021679) ptprfb (ENSSLUG00000014459) CDCP2 (ENSSLUG00000013802) tceanc2 (ENSSLUG00000013788) tmem59 (ENSSLUG00000013781) lrrc42 (ENSSLUG00000013773) yipf1 (ENSSLUG00000013750) zgc:113691 (ENSSLUG00000013740) Channel bull blenny MODERN SPECIES 8 DAPK3 (ENSCGOG00000001711) sppl2 (ENSCGOG00000024570) arhgef18a (ENSCGOG00000024562) insra (ENSCGOG00000024530) mfsd14a2 (ENSCGOG00000024457) ENSCGOG00000024404 loxl5b (ENSCGOG00000024389) nmrk2 (ENSCGOG00000024385) ATCAY (ENSCGOG00000024382) rx2 (ENSCGOG00000024381) ENSCGOG00000024380 calr3a (ENSCGOG00000024377) ENSCGOG00000024301 klf2b (ENSCGOG00000024277) ap1m1 (ENSCGOG00000024195) TPM4 (ENSCGOG00000023639) ##22 rab8a (ENSCGOG00000023494) CIB3 (ENSCGOG00000023488) admp (ENSCGOG00000023485) pnhd (ENSCGOG00000023482) ENSCGOG00000023480 ENSCGOG00000023471 ranbp3b (ENSCGOG00000023383) NRTN (ENSCGOG00000023378) ptprfb (ENSCGOG00000018196) CDCP2 (ENSCGOG00000018023) tceanc2 (ENSCGOG00000018019) tmem59 (ENSCGOG00000018016) lrrc42 (ENSCGOG00000018012) yipf1 (ENSCGOG00000018010) zgc:113691 (ENSCGOG00000018009) Cottioidei ANCESTRAL SPECIES 22 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00690000103893 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Lumpfish MODERN SPECIES 8 arhgef18a (ENSCLMG00005009552) sppl2 (ENSCLMG00005009564) insra (ENSCLMG00005010724) mfsd14a2 (ENSCLMG00005018750) ENSCLMG00005019375 loxl5b (ENSCLMG00005019478) nmrk2 (ENSCLMG00005019484) ATCAY (ENSCLMG00005019493) ENSCLMG00005019496 rx2 (ENSCLMG00005019518) ENSCLMG00005019523 ENSCLMG00005019524 ENSCLMG00005019530 ENSCLMG00005020479 ap1m1 (ENSCLMG00005020480) TPM4 (ENSCLMG00005020486) ##22 rab8a (ENSCLMG00005020691) CIB3 (ENSCLMG00005020693) admp (ENSCLMG00005020706) pnhd (ENSCLMG00005020707) ENSCLMG00005020711 ranbp3b (ENSCLMG00005020719) NRTN (ENSCLMG00005020741) ENSCLMG00005020743 ptprfb (ENSCLMG00005020849) CDCP2 (ENSCLMG00005022889) tceanc2 (ENSCLMG00005022890) tmem59 (ENSCLMG00005022891) lrrc42 (ENSCLMG00005022892) yipf1 (ENSCLMG00005022893) zgc:113691 (ENSCLMG00005022894) Stickleback MODERN SPECIES 2 ENSGACG00000016948 DAPK3 (ENSGACG00000016942) sppl2 (ENSGACG00000016939) arhgef18a (ENSGACG00000016935) insra (ENSGACG00000016929) mfsd14a2 (ENSGACG00000016925) ENSGACG00000016918 ENSGACG00000016917 loxl5b (ENSGACG00000016914) ATCAY (ENSGACG00000016905) rx2 (ENSGACG00000016904) ENSGACG00000016898 ENSGACG00000016893 klf2b (ENSGACG00000016890) ap1m1 (ENSGACG00000016883) TPM4 (ENSGACG00000016865) ##22 rab8a (ENSGACG00000016850) CIB3 (ENSGACG00000016844) admp (ENSGACG00000016841) pnhd (ENSGACG00000016840) ENSGACG00000016838 ranbp3b (ENSGACG00000016825) NRTN (ENSGACG00000016823) ptprfb (ENSGACG00000016820) CDCP2 (ENSGACG00000016818) tceanc2 (ENSGACG00000016816) tmem59 (ENSGACG00000016804) lrrc42 (ENSGACG00000016801) yipf1 (ENSGACG00000016795) ndc1 (ENSGACG00000016789) DCAF8 (ENSGACG00000016788) Percomorphaceae_D ANCESTRAL SPECIES 6 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Anabantaria ANCESTRAL SPECIES 8 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Zig-zag eel MODERN SPECIES 8 arhgef18a (ENSMAMG00000002226) insra (ENSMAMG00000002263) mfsd14a2 (ENSMAMG00000002348) ENSMAMG00000025484 loxl5b (ENSMAMG00000027833) nmrk2 (ENSMAMG00000027862) ENSMAMG00000002438 ENSMAMG00000024656 ENSMAMG00000027625 cplx4c (ENSMAMG00000004404) rx2 (ENSMAMG00000004421) ENSMAMG00000004470 ENSMAMG00000004501 klf2b (ENSMAMG00000004549) ap1m1 (ENSMAMG00000004566) ENSMAMG00000004619 ##22 rab8a (ENSMAMG00000004673) ENSMAMG00000026876 ENSMAMG00000005160 admp (ENSMAMG00000005408) pnhd (ENSMAMG00000024571) ENSMAMG00000005430 ENSMAMG00000005434 ranbp3b (ENSMAMG00000005453) ENSMAMG00000005503 ENSMAMG00000005509 ENSMAMG00000005522 CDCP2 (ENSMAMG00000005611) TCEANC2 (ENSMAMG00000005605) tmem59 (ENSMAMG00000025075) lrrc42 (ENSMAMG00000026926) Carangaria ANCESTRAL SPECIES 5 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Carangaria_A ANCESTRAL SPECIES 2 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00940000179442 ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Barramundi perch MODERN SPECIES 74 arhgef18a (ENSLCAG00010016005) insra (ENSLCAG00010016069) mfsd14a2 (ENSLCAG00010016277) ENSLCAG00010016322 loxl5b (ENSLCAG00010016325) nmrk2 (ENSLCAG00010016330) ATCAY (ENSLCAG00010016334) ENSLCAG00010016452 ENSLCAG00010016936 rx2 (ENSLCAG00010016937) DNAH8 (ENSLCAG00010016949) ENSLCAG00010017004 ENSLCAG00010017034 klf2b (ENSLCAG00010017056) ap1m1 (ENSLCAG00010017067) TPM4 (ENSLCAG00010017093) ##22 rab8a (ENSLCAG00010017119) CIB3 (ENSLCAG00010017122) admp (ENSLCAG00010017132) pnhd (ENSLCAG00010017136) ENSLCAG00010017137 ENSLCAG00010017138 ranbp3b (ENSLCAG00010017142) NRTN (ENSLCAG00010017171) ENSLCAG00010017173 ptprfb (ENSLCAG00010017520) CDCP2 (ENSLCAG00010020436) tceanc2 (ENSLCAG00010020443) tmem59 (ENSLCAG00010020447) lrrc42 (ENSLCAG00010020454) yipf1 (ENSLCAG00010020458) Seriola ANCESTRAL SPECIES 45 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Greater amberjack MODERN SPECIES 99 sppl2 (ENSSDUG00000012109) arhgef18a (ENSSDUG00000012076) insra (ENSSDUG00000011994) mfsd14a2 (ENSSDUG00000011938) ENSSDUG00000011828 loxl5b (ENSSDUG00000011790) nmrk2 (ENSSDUG00000011777) ATCAY (ENSSDUG00000011755) ENSSDUG00000010767 rx2 (ENSSDUG00000010646) DNAH8 (ENSSDUG00000010493) ENSSDUG00000010450 ENSSDUG00000010331 klf2b (ENSSDUG00000010309) ap1m1 (ENSSDUG00000010253) TPM4 (ENSSDUG00000010212) ##22 rab8a (ENSSDUG00000010203) CIB3 (ENSSDUG00000010171) ENSSDUG00000010120 admp (ENSSDUG00000010089) pnhd (ENSSDUG00000010033) ENSSDUG00000010013 ENSSDUG00000009997 ranbp3b (ENSSDUG00000009893) NRTN (ENSSDUG00000009853) ENSSDUG00000009842 ptprfb (ENSSDUG00000009788) ENSSDUG00000009774 CDCP2 (ENSSDUG00000009747) tceanc2 (ENSSDUG00000009728) tmem59 (ENSSDUG00000009718) Yellowtail amberjack MODERN SPECIES 3098 sppl2 (ENSSLDG00000011200) arhgef18a (ENSSLDG00000011115) insra (ENSSLDG00000011008) mfsd14a2 (ENSSLDG00000010966) ENSSLDG00000010862 loxl5b (ENSSLDG00000010821) nmrk2 (ENSSLDG00000010406) ATCAY (ENSSLDG00000010332) ENSSLDG00000010314 rx2 (ENSSLDG00000010289) DNAH8 (ENSSLDG00000010077) ENSSLDG00000010003 ENSSLDG00000009931 klf2b (ENSSLDG00000009910) ap1m1 (ENSSLDG00000009850) TPM4 (ENSSLDG00000009760) ##22 rab8a (ENSSLDG00000009731) CIB3 (ENSSLDG00000009713) ENSSLDG00000009439 admp (ENSSLDG00000009383) pnhd (ENSSLDG00000009328) ENSSLDG00000009311 ENSSLDG00000009305 ranbp3b (ENSSLDG00000009200) Ovalentaria ANCESTRAL SPECIES 5 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Ovalentaria_B ANCESTRAL SPECIES 6 ENSGT00940000161753 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Cichlidae ANCESTRAL SPECIES 2 ENSGT00940000153424.a.a.d ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000169355 ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Pseudocrenilabrinae ANCESTRAL SPECIES 7 ENSGT00940000153424.a.a.d ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000169355 ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 4 ENSGT00940000153424.a.a.d ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000169355 ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Haplochromini ANCESTRAL SPECIES 2 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000156845.v ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000169355 ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Haplochromini_A ANCESTRAL SPECIES 3 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000156845.v ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000169355 ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a P. nyererei MODERN SPECIES 326 sppl2 (ENSPNYG00000008155) arhgef18a (ENSPNYG00000008118) insra (ENSPNYG00000008035) mfsd14a2 (ENSPNYG00000007987) ENSPNYG00000007844 loxl5b (ENSPNYG00000007772) nmrk2 (ENSPNYG00000007759) ATCAY (ENSPNYG00000007738) cplx4c (ENSPNYG00000007709) rx2 (ENSPNYG00000007700) DNAH8 (ENSPNYG00000007506) ENSPNYG00000007476 ENSPNYG00000007382 ENSPNYG00000007351 ap1m1 (ENSPNYG00000007319) TPM4 (ENSPNYG00000007259) ##22 rab8a (ENSPNYG00000007220) CIB3 (ENSPNYG00000007193) admp (ENSPNYG00000007174) pnhd (ENSPNYG00000007131) ENSPNYG00000007116 ENSPNYG00000007099 ranbp3b (ENSPNYG00000007075) ENSPNYG00000007044 larp6b (ENSPNYG00000007025) ptprfb (ENSPNYG00000006921) CDCP2 (ENSPNYG00000006881) tceanc2 (ENSPNYG00000006868) tmem59 (ENSPNYG00000006839) lrrc42 (ENSPNYG00000006826) yipf1 (ENSPNYG00000006812) Haplochromini_B ANCESTRAL SPECIES 35 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000156845.v ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a.c.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000169355 ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Zebra mbuna MODERN SPECIES 1100 ENSMZEG00005024437 ENSMZEG00005024435 ENSMZEG00005024434 ENSMZEG00005024433 ENSMZEG00005024432 loxl5b (ENSMZEG00005024431) nmrk2 (ENSMZEG00005024429) ATCAY (ENSMZEG00005024428) cplx4c (ENSMZEG00005024427) rx2 (ENSMZEG00005024425) DNAH8 (ENSMZEG00005024421) ENSMZEG00005024418 ENSMZEG00005024416 ENSMZEG00005024415 ap1m1 (ENSMZEG00005024413) TPM4 (ENSMZEG00005024409) ##22 rab8a (ENSMZEG00005024406) CIB3 (ENSMZEG00005024404) admp (ENSMZEG00005024402) pnhd (ENSMZEG00005024401) ENSMZEG00005024398 ENSMZEG00005024396 ranbp3b (ENSMZEG00005024394) ENSMZEG00005024393 larp6b (ENSMZEG00005024390) ptprfb (ENSMZEG00005024379) ENSMZEG00005024376 ENSMZEG00005024375 CDCP2 (ENSMZEG00005024374) tceanc2 (ENSMZEG00005024373) tmem59 (ENSMZEG00005024371) Eastern happy MODERN SPECIES 9 sppl2 (ENSACLG00000011297) arhgef18a (ENSACLG00000011286) insra (ENSACLG00000011245) mfsd14a2 (ENSACLG00000011223) ENSACLG00000011076 loxl5b (ENSACLG00000011015) nmrk2 (ENSACLG00000011005) ATCAY (ENSACLG00000010970) cplx4c (ENSACLG00000010955) rx2 (ENSACLG00000010943) DNAH8 (ENSACLG00000010713) ENSACLG00000010700 ENSACLG00000010693 ENSACLG00000010674 ap1m1 (ENSACLG00000010617) TPM4 (ENSACLG00000010559) ##22 rab8a (ENSACLG00000010548) CIB3 (ENSACLG00000010536) admp (ENSACLG00000010496) pnhd (ENSACLG00000010472) ENSACLG00000010461 ENSACLG00000010434 ranbp3b (ENSACLG00000010020) ENSACLG00000010004 larp6b (ENSACLG00000009988) ptprfb (ENSACLG00000009769) CDCP2 (ENSACLG00000009740) tceanc2 (ENSACLG00000009735) tmem59 (ENSACLG00000009725) lrrc42 (ENSACLG00000009723) yipf1 (ENSACLG00000009718) Burton s mouthbrooder MODERN SPECIES 477 arhgef18a (ENSHBUG00000013499) insra (ENSHBUG00000013474) mfsd14a2 (ENSHBUG00000013380) ENSHBUG00000013344 ENSHBUG00000013329 loxl5b (ENSHBUG00000013301) nmrk2 (ENSHBUG00000013293) ATCAY (ENSHBUG00000013280) cplx4c (ENSHBUG00000013260) rx2 (ENSHBUG00000013240) DNAH8 (ENSHBUG00000013210) ENSHBUG00000012961 ENSHBUG00000012949 ENSHBUG00000012883 ap1m1 (ENSHBUG00000012863) TPM4 (ENSHBUG00000012822) ##22 rab8a (ENSHBUG00000012776) CIB3 (ENSHBUG00000001137) admp (ENSHBUG00000012701) pnhd (ENSHBUG00000000873) ENSHBUG00000012588 ENSHBUG00000012431 ranbp3b (ENSHBUG00000012404) ENSHBUG00000012358 larp6b (ENSHBUG00000012344) ptprfb (ENSHBUG00000000344) Lyretail cichlid MODERN SPECIES 313 ENSNBRG00000011596 ENSNBRG00000011614 sppl2 (ENSNBRG00000011637) arhgef18a (ENSNBRG00000011680) insra (ENSNBRG00000011734) mfsd14a2 (ENSNBRG00000011804) loxl5b (ENSNBRG00000011870) nmrk2 (ENSNBRG00000011899) ATCAY (ENSNBRG00000011928) cplx4c (ENSNBRG00000011980) rx2 (ENSNBRG00000011995) DNAH8 (ENSNBRG00000012073) ENSNBRG00000012411 ENSNBRG00000012440 ap1m1 (ENSNBRG00000012502) ENSNBRG00000012547 ##22 rab8a (ENSNBRG00000012588) CIB3 (ENSNBRG00000012599) admp (ENSNBRG00000012628) pnhd (ENSNBRG00000012651) ENSNBRG00000012702 ENSNBRG00000012715 ENSNBRG00000012721 ENSNBRG00000012737 larp6b (ENSNBRG00000012748) ptprfb (ENSNBRG00000012762) ENSNBRG00000012826 CDCP2 (ENSNBRG00000012837) tceanc2 (ENSNBRG00000012854) tmem59 (ENSNBRG00000012865) lrrc42 (ENSNBRG00000012883) Nile tilapia MODERN SPECIES 9 sppl2 (ENSONIG00000018616) arhgef18a (ENSONIG00000018613) insra (ENSONIG00000018609) mfsd14a (ENSONIG00000037562) ENSONIG00000018600 loxl5b (ENSONIG00000018598) nmrk2 (ENSONIG00000018596) ATCAY (ENSONIG00000018595) cplx4c (ENSONIG00000037812) rx2 (ENSONIG00000018592) DNAH8 (ENSONIG00000018590) ENSONIG00000018588 ENSONIG00000018582 ENSONIG00000018581 ap1m1 (ENSONIG00000018580) TPM4 (ENSONIG00000018578) ##22 rab8a (ENSONIG00000018577) CIB3 (ENSONIG00000018576) admp (ENSONIG00000018575) pnhd (ENSONIG00000018574) ENSONIG00000018573 ENSONIG00000032552 ranbp3b (ENSONIG00000018570) ENSONIG00000041766 larp6b (ENSONIG00000036949) PTPRF (ENSONIG00000018563) ENSONIG00000037432 tceanc2 (ENSONIG00000035739) tmem59 (ENSONIG00000018555) lrrc42 (ENSONIG00000018554) yipf1 (ENSONIG00000018553) Midas cichlid MODERN SPECIES 34 arhgef18a (ENSACIG00000007619) insra (ENSACIG00000007680) mfsd14a2 (ENSACIG00000007726) ENSACIG00000007873 ENSACIG00000007943 loxl5b (ENSACIG00000007956) nmrk2 (ENSACIG00000007974) ATCAY (ENSACIG00000007994) cplx4c (ENSACIG00000008021) rx2 (ENSACIG00000008025) ENSACIG00000008035 ENSACIG00000008056 ENSACIG00000008077 ENSACIG00000008092 ap1m1 (ENSACIG00000008105) ENSACIG00000008125 ##22 rab8a (ENSACIG00000008151) CIB3 (ENSACIG00000008163) admp (ENSACIG00000008180) pnhd (ENSACIG00000008197) ENSACIG00000008210 ENSACIG00000008227 ranbp3b (ENSACIG00000008243) ENSACIG00000008335 ENSACIG00000008349 ptprfb (ENSACIG00000008360) ENSACIG00000008417 CDCP2 (ENSACIG00000008431) tceanc2 (ENSACIG00000008447) tmem59 (ENSACIG00000008460) lrrc42 (ENSACIG00000008476) Pomacentridae ANCESTRAL SPECIES 45 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000156845.x ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00940000179442 ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Bicolor damselfish MODERN SPECIES 295 DAPK3 (ENSSPAG00000012830) sppl2 (ENSSPAG00000012854) arhgef18a (ENSSPAG00000012894) insra (ENSSPAG00000012933) mfsd14a2 (ENSSPAG00000013017) ENSSPAG00000013065 loxl5b (ENSSPAG00000013170) nmrk2 (ENSSPAG00000013193) ATCAY (ENSSPAG00000013203) ENSSPAG00000013255 rx2 (ENSSPAG00000013540) ENSSPAG00000013551 ENSSPAG00000013587 klf2b (ENSSPAG00000013663) ap1m1 (ENSSPAG00000013678) TPM4 (ENSSPAG00000013716) ##22 rab8a (ENSSPAG00000013771) CIB3 (ENSSPAG00000013789) admp (ENSSPAG00000013820) pnhd (ENSSPAG00000013863) ENSSPAG00000013935 ENSSPAG00000014192 ranbp3b (ENSSPAG00000014218) ENSSPAG00000014305 larp6b (ENSSPAG00000014320) ptprfb (ENSSPAG00000014356) Pomacentridae_A ANCESTRAL SPECIES 61 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000156845.x ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00940000179442 ENSGT00940000163917.a.b ENSGT00940000158992.bb ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Spiny chromis MODERN SPECIES 544 ENSAPOG00000003056 ENSAPOG00000003110 klf2b (ENSAPOG00000003124) ap1m1 (ENSAPOG00000003175) ENSAPOG00000003253 ##22 rab8a (ENSAPOG00000003307) CIB3 (ENSAPOG00000003334) admp (ENSAPOG00000003351) pnhd (ENSAPOG00000003384) ENSAPOG00000003486 ENSAPOG00000003504 ranbp3b (ENSAPOG00000003546) NRTN (ENSAPOG00000003558) ENSAPOG00000003568 ptprfb (ENSAPOG00000003809) Amphiprion ANCESTRAL SPECIES 66 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000156845.x ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00940000179442 ENSGT00940000163917.a.b ENSGT00940000158992.bb ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Clown anemonefish MODERN SPECIES 1489 ENSAOCG00000004988 ENSAOCG00000004965 klf2b (ENSAOCG00000004915) ap1m1 (ENSAOCG00000004909) TPM4 (ENSAOCG00000000188) ##22 rab8a (ENSAOCG00000004831) CIB3 (ENSAOCG00000004805) admp (ENSAOCG00000004780) pnhd (ENSAOCG00000004766) ENSAOCG00000004749 ENSAOCG00000004720 ranbp3b (ENSAOCG00000004683) NRTN (ENSAOCG00000004658) larp6b (ENSAOCG00000004646) ENSAOCG00000004639 Orange clownfish MODERN SPECIES 1 sppl2 (ENSAPEG00000021790) arhgef18a (ENSAPEG00000021806) insra (ENSAPEG00000021882) mfsd14a2 (ENSAPEG00000021916) ENSAPEG00000021943 loxl5b (ENSAPEG00000021983) nmrk2 (ENSAPEG00000022020) ATCAY (ENSAPEG00000022029) ENSAPEG00000022090 ENSAPEG00000022389 rx2 (ENSAPEG00000022400) ENSAPEG00000022461 ENSAPEG00000022516 klf2b (ENSAPEG00000022551) ap1m1 (ENSAPEG00000022565) TPM4 (ENSAPEG00000022600) ##22 rab8a (ENSAPEG00000022630) CIB3 (ENSAPEG00000022653) admp (ENSAPEG00000022668) pnhd (ENSAPEG00000022677) ENSAPEG00000022686 ENSAPEG00000022693 ranbp3b (ENSAPEG00000022712) ENSAPEG00000022733 larp6b (ENSAPEG00000022748) ptprfb (ENSAPEG00000022767) ENSAPEG00000022836 CDCP2 (ENSAPEG00000022844) tceanc2 (ENSAPEG00000022855) tmem59 (ENSAPEG00000022871) lrrc42 (ENSAPEG00000022886) Atherinomorphae ANCESTRAL SPECIES 4 ENSGT00940000161753 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 Cyprinodontiformes ANCESTRAL SPECIES 5 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00690000103893 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 Aplocheiloidei ANCESTRAL SPECIES 11 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000169355 ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Mangrove rivulus MODERN SPECIES 17 arhgef18a (ENSKMAG00000022000) insra (ENSKMAG00000021993) mfsd14a2 (ENSKMAG00000021986) ENSKMAG00000021966 loxl5b (ENSKMAG00000021961) nmrk2 (ENSKMAG00000021956) ENSKMAG00000021886 ENSKMAG00000021762 ATCAY (ENSKMAG00000021719) ENSKMAG00000021624 cplx4c (ENSKMAG00000021571) rx2 (ENSKMAG00000021563) ENSKMAG00000021510 klf2b (ENSKMAG00000021486) ap1m1 (ENSKMAG00000021466) TPM4 (ENSKMAG00000021445) ##22 rab8a (ENSKMAG00000021422) CIB3 (ENSKMAG00000021413) admp (ENSKMAG00000021403) pnhd (ENSKMAG00000021395) ENSKMAG00000021388 ENSKMAG00000021382 ranbp3b (ENSKMAG00000021357) ENSKMAG00000021343 ptprfb (ENSKMAG00000021139) CDCP2 (ENSKMAG00000021073) tceanc2 (ENSKMAG00000021064) ENSKMAG00000021054 tmem59 (ENSKMAG00000021045) lrrc42 (ENSKMAG00000021032) yipf1 (ENSKMAG00000021019) Turquoise killifish MODERN SPECIES 1618 ENSNFUG00015024948 ttc17 (ENSNFUG00015024960) HSD17B12B (ENSNFUG00015024988) ENSNFUG00015024992 loxl5b (ENSNFUG00015004712) nmrk2 (ENSNFUG00015004742) ATCAYB (ENSNFUG00015004751) ENSNFUG00015004784 ENSNFUG00015004989 cplx4c (ENSNFUG00015004995) rx2 (ENSNFUG00015005000) ENSNFUG00015005017 ENSNFUG00015005127 KLF2 (ENSNFUG00015005428) AP1M1 (ENSNFUG00015005455) TPM4 (ENSNFUG00015005676) ##22 DAPK3 (ENSNFUG00015006112) prkci (ENSNFUG00015006288) SKILA (ENSNFUG00015007336) ENSNFUG00015007343 ENSNFUG00015007346 nadkb (ENSNFUG00015007388) sec62 (ENSNFUG00015007731) samd7 (ENSNFUG00015007744) apoda.2 (ENSNFUG00015007755) apoda.1 (ENSNFUG00015007826) and2 (ENSNFUG00015007833) ENSNFUG00015007837 ENSNFUG00015007843 LRRCC1 (ENSNFUG00015007861) e2f5 (ENSNFUG00015007880) Pinecone sodierfish MODERN SPECIES 8 tyw3 (ENSMMDG00005011835) ENSMMDG00005011837 insra (ENSMMDG00005011859) mfsd14a2 (ENSMMDG00005013508) ENSMMDG00005013530 loxl5b (ENSMMDG00005013539) nmrk2 (ENSMMDG00005013589) ATCAY (ENSMMDG00005013598) cplx4c (ENSMMDG00005013610) rx2 (ENSMMDG00005013611) ENSMMDG00005013614 ENSMMDG00005013619 klf2b (ENSMMDG00005013620) ap1m1 (ENSMMDG00005013621) LPL (ENSMMDG00005013663) TPM4 (ENSMMDG00005015251) ##22 rab8a (ENSMMDG00005015319) CIB3 (ENSMMDG00005015320) admp (ENSMMDG00005015323) pnhd (ENSMMDG00005015325) ENSMMDG00005015328 ENSMMDG00005015370 ranbp3b (ENSMMDG00005015448) NRTN (ENSMMDG00005016011) larp6b (ENSMMDG00005016012) ptprfb (ENSMMDG00005016190) CDCP2 (ENSMMDG00005022933) tceanc2 (ENSMMDG00005022940) tmem59 (ENSMMDG00005022942) lrrc42 (ENSMMDG00005022944) yipf1 (ENSMMDG00005022946) Otomorpha ANCESTRAL SPECIES 5 ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000158081.o.b ENSGT00940000157413 ENSGT00390000015368.a.a.c ENSGT00940000162806.b.a ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00940000156466 ENSGT00390000018651.a ENSGT00950000182993.A.a.j ENSGT00390000007336.a.b ENSGT00940000155569.a.b ENSGT00940000154456.hb.a Clupeiformes ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 Atlantic herring MODERN SPECIES 14 ISYNA1 (ENSCHAG00000009939) tpgs1 (ENSCHAG00000010013) plekhj1 (ENSCHAG00000010039) sf3a2 (ENSCHAG00000010081) ENSCHAG00000010114 ONECUT3 (ENSCHAG00000010124) pias4b (ENSCHAG00000010149) napgb (ENSCHAG00000010239) PIEZO2 (ENSCHAG00000010875) ENSCHAG00000010931 ABHD8 (ENSCHAG00000010952) NRTN (ENSCHAG00000010996) capsla (ENSCHAG00000011001) ranbp3b (ENSCHAG00000011015) klf2b (ENSCHAG00000011452) ENSCHAG00000011476 ##22 rx2 (ENSCHAG00000011826) ATCAY (ENSCHAG00000011833) nmrk2 (ENSCHAG00000011851) loxl5b (ENSCHAG00000011885) jund (ENSCHAG00000011907) pgpep1 (ENSCHAG00000011933) upf1 (ENSCHAG00000011953) HOMER3 (ENSCHAG00000012378) ENSCHAG00000012406 eeig2a (ENSCHAG00000012638) prpf38b (ENSCHAG00000012703) ENSCHAG00000012712 ENSCHAG00000012732 FNDC7 (ENSCHAG00000012892) ENSCHAG00000012908 Otophysi ANCESTRAL SPECIES 52 ENSGT00940000158081.o.b ENSGT00940000157413 ENSGT00390000015368.a.a.c ENSGT00940000162806.b.a ENSGT00940000181505 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 Cyprinoidei ANCESTRAL SPECIES 17 ENSGT00390000015368.a.a.c ENSGT00940000162806.b.a ENSGT00940000181505 ENSGT00940000154779.a.a.c ENSGT00940000153593.h.a.a ENSGT00940000158081.o.b ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924.f ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT00940000157246.a ENSGT00940000160466 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 238 ENSGT00940000157924.e ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b.a ##22 ENSGT00940000157246.a.b ENSGT00940000160466.a ENSGT00940000165063.g ENSGT00390000005847.a ENSGT01000000214896.A ENSGT00900000141362.a.a.e.a ENSGT00940000158588.j.b ENSGT00940000156466.db.a ENSGT00950000182993.A.a.j.c.a ENSGT00390000007336.a.b.a ENSGT00940000155569.a.b ENSGT00940000154456.hb.a.e ENSGT00390000005826.b.f.a ENSGT00940000159325.a ENSGT00950000182982.A.b.u Cyprininae_a ANCESTRAL SPECIES 162 ENSGT00940000158081.o.b.b ENSGT00940000157413.i ENSGT00390000015368.a.a.c.b ENSGT00940000162806.b.a ENSGT00940000154779.a.a.c.a ENSGT00940000165007.a.b ENSGT00940000158364.a.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b.a ENSGT00950000182915.b.b.a.b.c.b.b ENSGT00940000155438.a.r ENSGT00940000164495.c.a.b ENSGT00940000157924.f ENSGT01030000234542.b.b.a.a.a.b.wb.b.b ##22 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b.a ##22 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000157246.a.a ENSGT00940000160466.a ENSGT00940000165063.h ENSGT00390000005847.b ENSGT00940000165287.a.a ENSGT01000000214896.B ENSGT00900000141362.a.a.e.b ENSGT00940000158588.j.a ENSGT00940000156466.db.b ENSGT00390000007336.a.b.b ENSGT00940000154456.hb.a.f ENSGT00390000005826.b.f.b ENSGT00940000159325.b Common carp reference MODERN SPECIES 29 ENSCCRG00000071775 ENSCCRG00000067269 uba52 (ENSCCRG00000007704) ENSCCRG00000007775 upf1 (ENSCCRG00000007785) pgpep1 (ENSCCRG00000007790) loxl5b (ENSCCRG00000074189) nmrk2 (ENSCCRG00000051935) ENSCCRG00000051906 rx2 (ENSCCRG00000007794) ENSCCRG00000076172 ENSCCRG00000053619 klf2b (ENSCCRG00000006413) ENSCCRG00000049877 ENSCCRG00000007837 ENSCCRG00000076191 ##22 ENSCCRG00000052584 admp (ENSCCRG00000030620) pnhd (ENSCCRG00000030625) ENSCCRG00000030635 ENSCCRG00000037946 ENSCCRG00000027011 ranbp3b (ENSCCRG00000009959) capsla (ENSCCRG00000009956) ENSCCRG00000014085 ENSCCRG00000010079 ENSCCRG00000010057 ENSCCRG00000000858 napgb (ENSCCRG00000001797) rab12 (ENSCCRG00000001866) MTCL1 (ENSCCRG00000064731) Goldfish MODERN SPECIES 19 uba52 (ENSCARG00000011408) HOMER3 (ENSCARG00000011431) upf1 (ENSCARG00000011474) pgpep1 (ENSCARG00000011489) jund (ENSCARG00000011501) loxl5b (ENSCARG00000011513) ENSCARG00000011526 nmrk2 (ENSCARG00000011532) ATCAY (ENSCARG00000020674) rx2 (ENSCARG00000020728) ENSCARG00000020750 ENSCARG00000021214 klf2b (ENSCARG00000021223) ap1m1 (ENSCARG00000021242) LPL (ENSCARG00000021713) TPM4 (ENSCARG00000021759) ##22 rab8a (ENSCARG00000021840) CIB3 (ENSCARG00000021892) ENSCARG00000021897 admp (ENSCARG00000021903) pnhd (ENSCARG00000021921) ENSCARG00000021930 ENSCARG00000021934 ranbp3b (ENSCARG00000021950) capsla (ENSCARG00000021984) ENSCARG00000021990 ABHD8 (ENSCARG00000021995) ENSCARG00000022011 PIEZO2 (ENSCARG00000022077) napgb (ENSCARG00000022710) rab12 (ENSCARG00000022749) Cyprininae ANCESTRAL SPECIES 324 ENSGT00940000153593.h.a.b ENSGT00940000153593.h.b.b ENSGT00940000158081.o.b.b ENSGT00940000157413.i ENSGT00390000015368.a.a.c.b ENSGT00940000162806.b.a ENSGT00940000154779.a.a.c.a ENSGT00940000165007.a.b ENSGT00940000158364.a.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b.a ENSGT00950000182915.b.b.a.b.c.b.b ENSGT00940000155438.a.r ENSGT00940000164495.c.a ENSGT00940000157924.f ENSGT01030000234542.b.b.a.a.a.b.wb.b.b ##22 ENSGT00940000157246.a.a Goldfish DUPLICATION Goldfish MODERN SPECIES 11 loxl5b (ENSCARG00000039848) nmrk2 (ENSCARG00000039889) ATCAY (ENSCARG00000039907) cplx4c (ENSCARG00000039962) rx2 (ENSCARG00000039976) ENSCARG00000040005 ENSCARG00000040093 klf2b (ENSCARG00000040217) ENSCARG00000040236 ap1m1 (ENSCARG00000040258) ENSCARG00000040473 ##22 admp (ENSCARG00000040664) pnhd (ENSCARG00000040685) ENSCARG00000040695 ENSCARG00000040719 ENSCARG00000040961 upf1 (ENSCARG00000041022) pgpep1 (ENSCARG00000041182) jund (ENSCARG00000041219) pnp5b (ENSCARG00000041228) NCSTN (ENSCARG00000041254) fcer1gl (ENSCARG00000041767) FEM1A (ENSCARG00000041785) FEM1A (ENSCARG00000041813) ENSCARG00000041823 ENSCARG00000041828 Goldfish MODERN SPECIES 11 ndufv2 (ENSCARG00000016875) MTCL1 (ENSCARG00000016864) rab12 (ENSCARG00000016855) napgb (ENSCARG00000016824) acss2l (ENSCARG00000012959) ENSCARG00000012170 ABHD8 (ENSCARG00000012105) ENSCARG00000012101 capsla (ENSCARG00000012093) ranbp3b (ENSCARG00000011978) ENSCARG00000004673 ENSCARG00000004669 ENSCARG00000004611 klf2b (ENSCARG00000004596) ap1m1 (ENSCARG00000004489) ENSCARG00000004432 ##22 vapal (ENSCARG00000004411) APCDD1 (ENSCARG00000004398) sf3a2 (ENSCARG00000004385) plekhj1 (ENSCARG00000004377) ISYNA1 (ENSCARG00000004293) ENSCARG00000004267 ENSCARG00000004246 fcer1gl (ENSCARG00000004239) ENSCARG00000004235 ENSCARG00000003764 pnp5b (ENSCARG00000003722) foxl2b (ENSCARG00000003716) vapal (ENSCARG00000003702) APCDD1 (ENSCARG00000003686) ENSCARG00000003678 Cyprininae_a ANCESTRAL SPECIES 162 ENSGT01030000234515.a.b.b.b.b ENSGT00940000153593.h.b.b ENSGT00940000158081.o.b.b ENSGT00940000157413.i ENSGT00390000015368.a.a.c.b ENSGT00940000162806.b.a ENSGT00940000154779.a.a.c.a ENSGT00940000165007.a.b ENSGT00940000158364.a.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b.a ENSGT00950000182915.b.b.a.b.c.b.b ENSGT00940000155438.a.r ENSGT00940000164495.c.a.b ENSGT00940000157924.f ENSGT01030000234542.b.b.a.a.a.b.wb.b.b ##22 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b.a ##22 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000157246.a.a ENSGT00940000160466.a ENSGT00940000165063.h ENSGT00390000005847.b ENSGT00940000165287.a.a ENSGT01000000214896.B ENSGT00900000141362.a.a.e.b ENSGT00940000158588.j.a ENSGT00940000156466.db.b ENSGT00390000007336.a.b.b ENSGT00940000154456.hb.a.f Common carp reference MODERN SPECIES 21 ENSCCRG00000073664 ENSCCRG00000026536 uba52 (ENSCCRG00000016171) ENSCCRG00000058571 upf1 (ENSCCRG00000051892) pgpep1 (ENSCCRG00000073516) jund (ENSCCRG00000035101) loxl5b (ENSCCRG00000045132) nmrk2 (ENSCCRG00000045258) ENSCCRG00000045180 cplx4c (ENSCCRG00000079094) rx2 (ENSCCRG00000075008) ENSCCRG00000019801 ENSCCRG00000081626 klf2b (ENSCCRG00000011217) ENSCCRG00000016932 ##22 ap1m1 (ENSCCRG00000049217) ENSCCRG00000074681 admp (ENSCCRG00000079125) pnhd (ENSCCRG00000015688) ENSCCRG00000053089 ENSCCRG00000015682 ENSCCRG00000068957 ranbp3b (ENSCCRG00000015662) ENSCCRG00000014088 ENSCCRG00000069483 ENSCCRG00000014093 ENSCCRG00000021449 napgb (ENSCCRG00000035431) rab12 (ENSCCRG00000035454) MTCL1 (ENSCCRG00000063869) Characiphysae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 Characiphysae_b ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 Electric eel MODERN SPECIES 318 klf2b (ENSEEEG00000023858) ap1m1 (ENSEEEG00000023795) LPL (ENSEEEG00000023679) TPM4 (ENSEEEG00000023652) ##22 rab8a (ENSEEEG00000023636) CIB3 (ENSEEEG00000023628) SUGP1 (ENSEEEG00000023627) MAU2 (ENSEEEG00000023625) GATAD2A (ENSEEEG00000023623) NDUFA13 (ENSEEEG00000023622) cirbpa (ENSEEEG00000023620) ENSEEEG00000023619 CBARP (ENSEEEG00000023617) stk11 (ENSEEEG00000023616) ENSEEEG00000023615 vapal (ENSEEEG00000023614) APCDD1 (ENSEEEG00000023613) epb41l3b (ENSEEEG00000023612) ENSEEEG00000023611 Osteoglossocephalai ANCESTRAL SPECIES 180 ENSGT00730000111147 ENSGT00390000002505 ENSGT00950000182915.b.b.a.b ENSGT00390000012078.a.a ENSGT00940000155438.b ENSGT00940000164495.c.b ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT01030000235192 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00390000005338 ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000165061 ENSGT00940000166556 Osteoglossiformes ANCESTRAL SPECIES 243 ENSGT00940000166556.f ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000160888 ENSGT00940000165287.a.a ENSGT00940000165287.b ENSGT00900000141362.a.a.a ENSGT00940000158588.a ENSGT00950000182993.A.a.j.a ENSGT00390000012434 ENSGT00940000165636 ENSGT00530000063553.b.a ENSGT00390000006166.a ENSGT00940000160748.b Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 24 ENSSFOG00015001913 ENSSFOG00015001909 ENSSFOG00015032403 ENSSFOG00015001887 RFX2 (ENSSFOG00015001763) acsbg2 (ENSSFOG00015001707) MLLT1 (ENSSFOG00015001697) acer1 (ENSSFOG00015001670) myo1f (ENSSFOG00015001538) adamts10 (ENSSFOG00015001432) zap70 (ENSSFOG00015001357) ENSSFOG00015001332 MKNK2 (ENSSFOG00015001269) rexo1 (ENSSFOG00015001227) csnk1g2b (ENSSFOG00015001156) tpm4a (ENSSFOG00015027692) ##22 ENSSFOG00015019031 RAB8A (ENSSFOG00015019045) hsh2d (ENSSFOG00015019079) tax1bp3 (ENSSFOG00015024929) slc1a6 (ENSSFOG00015019106) ccl44 (ENSSFOG00015019138) ENSSFOG00015019191 ENSSFOG00015027791 ctns (ENSSFOG00015019502) RANBP3 (ENSSFOG00015019527) ENSSFOG00015019545 ENSSFOG00015013579 VMAC (ENSSFOG00015019553) rpl36 (ENSSFOG00015026253) lmnb2 (ENSSFOG00015019572) Asian bonytongue MODERN SPECIES 17 mfsd14a2 (ENSSFOG00015007072) ENSSFOG00015028704 CERS1 (ENSSFOG00015008357) cope (ENSSFOG00015008318) mydgf (ENSSFOG00015008264) loxl5b (ENSSFOG00015008206) ATCAY (ENSSFOG00015008182) ZFR2 (ENSSFOG00015008157) cplx4c (ENSSFOG00015030852) ENSSFOG00015008092 cherp (ENSSFOG00015008022) ENSSFOG00015007997 ENSSFOG00015031414 ENSSFOG00015032715 ENSSFOG00015007937 TPM4 (ENSSFOG00015007878) ##22 RAB8A (ENSSFOG00015007811) CIB3 (ENSSFOG00015007791) pole4 (ENSSFOG00015024772) ENSSFOG00015028013 ENSSFOG00015025774 ENSSFOG00015027394 ranbp3b (ENSSFOG00015007683) NRTN (ENSSFOG00015028268) ndufa11 (ENSSFOG00015007616) larp6b (ENSSFOG00015030911) LONP1 (ENSSFOG00015007550) mrpl34 (ENSSFOG00015024746) dda1 (ENSSFOG00015025013) plvapa (ENSSFOG00015007424) nr2f6a (ENSSFOG00015007399) P. kingsleyae MODERN SPECIES 4 MATK (ENSPKIG00000010328) rx1 (ENSPKIG00000010303) ENSPKIG00000010285 ENSPKIG00000010261 rad23ab (ENSPKIG00000010204) EPS15L1 (ENSPKIG00000010154) ENSPKIG00000010130 ap1m1 (ENSPKIG00000010048) fam32a (ENSPKIG00000009996) mrpl54 (ENSPKIG00000009984) malt2 (ENSPKIG00000009958) safb (ENSPKIG00000009902) ENSPKIG00000009828 ENSPKIG00000009774 lpl (ENSPKIG00000009745) ENSPKIG00000009682 ##22 ENSPKIG00000009649 RAB8A (ENSPKIG00000009603) hsh2d (ENSPKIG00000009561) tax1bp3 (ENSPKIG00000009527) slc1a6 (ENSPKIG00000009362) admp (ENSPKIG00000009274) ccl44 (ENSPKIG00000009259) ENSPKIG00000009244 ENSPKIG00000009232 ctns (ENSPKIG00000009205) RANBP3 (ENSPKIG00000009164) ENSPKIG00000009134 VMAC (ENSPKIG00000009107) rpl36 (ENSPKIG00000009092) lmnb2 (ENSPKIG00000009052) Clupeocephala ANCESTRAL SPECIES 672 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a Euteleosteomorpha ANCESTRAL SPECIES 496 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a Acanthomorphata ANCESTRAL SPECIES 475 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000164336 Euacanthomorphacea ANCESTRAL SPECIES 257 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000164336 Percomorphaceae ANCESTRAL SPECIES 220 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000164336 Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000167938 ENSGT00940000164336 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000167938 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a Eupercaria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.xb ##22 Tetraodontidae ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.xb ##22 Tetraodon MODERN SPECIES 26 ENSTNIG00000000861 ENSTNIG00000019592 ENSTNIG00000019490 ENSTNIG00000000995 ENSTNIG00000019474 ENSTNIG00000019481 ##22 ENSTNIG00000019734 serinc1 (ENSTNIG00000019609) ENSTNIG00000000680 ENSTNIG00000019688 rgs16 (ENSTNIG00000019476) ENSTNIG00000000225 bhmt (ENSTNIG00000019455) ENSTNIG00000019554 ENSTNIG00000019822 TPM4 (ENSTNIG00000019471) ##22 ENSTNIG00000019701 ENSTNIG00000019505 ENSTNIG00000019770 ENSTNIG00000019639 ENSTNIG00000019813 ENSTNIG00000019482 RAP1GAP (ENSTNIG00000019473) ENSTNIG00000019815 srd5a2a (ENSTNIG00000019827) ENSTNIG00000000781 pnp4a (ENSTNIG00000019818) spra (ENSTNIG00000019712) spra (ENSTNIG00000019718) spra (ENSTNIG00000019699) DNAL1 (ENSTNIG00000019602) Percomorphaceae_D ANCESTRAL SPECIES 8 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a Carangaria ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.xb ##22 Pleuronectoidei ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.xb ##22 Turbot MODERN SPECIES 19 sppl2 (ENSSMAG00000015610) arhgef18a (ENSSMAG00000015562) insra (ENSSMAG00000015526) mfsd14a2 (ENSSMAG00000015465) ENSSMAG00000015444 loxl5b (ENSSMAG00000015408) nmrk2 (ENSSMAG00000015396) ENSSMAG00000015350 ENSSMAG00000014972 cplx4c (ENSSMAG00000014957) rx2 (ENSSMAG00000014946) ENSSMAG00000014926 ENSSMAG00000014898 ENSSMAG00000014887 ap1m1 (ENSSMAG00000014843) TPM4 (ENSSMAG00000014803) ##22 rab8a (ENSSMAG00000032645) CIB3 (ENSSMAG00000014773) ENSSMAG00000014749 admp (ENSSMAG00000014741) pnhd (ENSSMAG00000014669) ENSSMAG00000014650 ENSSMAG00000014627 ranbp3b (ENSSMAG00000014567) ENSSMAG00000014524 ENSSMAG00000014209 CDCP2 (ENSSMAG00000023436) TCEANC2 (ENSSMAG00000014195) tmem59 (ENSSMAG00000035756) lrrc42 (ENSSMAG00000014131) yipf1 (ENSSMAG00000014125) Anabantaria ANCESTRAL SPECIES 7 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Zig-zag eel MODERN SPECIES 18 gna11a (ENSMAMG00000027912) gna15.4 (ENSMAMG00000002974) ENSMAMG00000002995 cdc34a (ENSMAMG00000027451) ap3d1 (ENSMAMG00000003036) ENSMAMG00000003232 ENSMAMG00000025889 fam32a (ENSMAMG00000027042) ENSMAMG00000003252 mrpl54 (ENSMAMG00000003291) malt2 (ENSMAMG00000003300) safb (ENSMAMG00000003357) lpl (ENSMAMG00000003371) ENSMAMG00000003401 ENSMAMG00000003412 TPM4 (ENSMAMG00000027000) ##22 ENSMAMG00000003458 ENSMAMG00000003480 HSH2D (ENSMAMG00000003529) tax1bp3 (ENSMAMG00000003535) slc1a6 (ENSMAMG00000003572) ENSMAMG00000003624 pole4 (ENSMAMG00000003637) ENSMAMG00000027253 ccl25b (ENSMAMG00000003667) tor3a (ENSMAMG00000003702) ENSMAMG00000003716 ENSMAMG00000003759 TTC39A (ENSMAMG00000003812) rnf11b (ENSMAMG00000028313) cdkn2c (ENSMAMG00000003888) Anabantoidei ANCESTRAL SPECIES 18 ENSGT00940000158753 ENSGT00940000157375.d ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000155464.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00940000158992 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Siamese fighting fish DUPLICATION Siamese fighting fish MODERN SPECIES 8 ENSBSLG00000026446 ENSBSLG00000026445 arhgef18a (ENSBSLG00000026444) insra (ENSBSLG00000026284) mfsd14a2 (ENSBSLG00000026162) ENSBSLG00000026138 loxl5b (ENSBSLG00000026129) nmrk2 (ENSBSLG00000026127) ATCAY (ENSBSLG00000026123) cplx4c (ENSBSLG00000026113) rx2 (ENSBSLG00000026109) ENSBSLG00000026085 ENSBSLG00000026013 ENSBSLG00000025946 ap1m1 (ENSBSLG00000025820) tpm4b (ENSBSLG00000025568) ##22 rab8a (ENSBSLG00000025494) CIB3 (ENSBSLG00000025480) admp (ENSBSLG00000025477) pnhd (ENSBSLG00000025471) ENSBSLG00000025463 ENSBSLG00000025414 ranbp3b (ENSBSLG00000025006) NRTN (ENSBSLG00000025001) ptprfb (ENSBSLG00000020272) CDCP2 (ENSBSLG00000020022) tceanc2 (ENSBSLG00000020017) tmem59 (ENSBSLG00000019992) lrrc42 (ENSBSLG00000019978) yipf1 (ENSBSLG00000019962) zgc:113691 (ENSBSLG00000019959) Siamese fighting fish MODERN SPECIES 15 ENSBSLG00000004379 gna11a (ENSBSLG00000004386) gna15.4 (ENSBSLG00000004396) C2CD4C (ENSBSLG00000004403) cdc34a (ENSBSLG00000004409) ap3d1 (ENSBSLG00000004467) hdgfl2 (ENSBSLG00000004722) fh (ENSBSLG00000004723) fam32a (ENSBSLG00000004724) mrpl54 (ENSBSLG00000004726) malt2 (ENSBSLG00000004730) safb (ENSBSLG00000004849) lpl (ENSBSLG00000004914) ENSBSLG00000005088 ENSBSLG00000005329 TPM4 (ENSBSLG00000005672) ##22 ENSBSLG00000006137 RAB8A (ENSBSLG00000006155) HSH2D (ENSBSLG00000006163) tax1bp3 (ENSBSLG00000006164) slc1a6 (ENSBSLG00000006168) ENSBSLG00000006186 pole4 (ENSBSLG00000006189) ENSBSLG00000006193 ccl25b (ENSBSLG00000006207) gclm (ENSBSLG00000006210) dnttip2 (ENSBSLG00000006215) ENSBSLG00000006218 ENSBSLG00000006219 AGBL4 (ENSBSLG00000006221) bend5 (ENSBSLG00000006226) Climbing perch DUPLICATION Climbing perch MODERN SPECIES 8 arhgef18a (ENSATEG00000021947) insra (ENSATEG00000021893) mfsd14a2 (ENSATEG00000021872) ENSATEG00000030020 loxl5b (ENSATEG00000021850) nmrk2 (ENSATEG00000021836) ENSATEG00000021806 ENSATEG00000021624 cplx4c (ENSATEG00000021592) rx2 (ENSATEG00000021571) ENSATEG00000021516 ENSATEG00000021467 ENSATEG00000021431 klf2b (ENSATEG00000021417) ap1m1 (ENSATEG00000021388) tpm4b (ENSATEG00000021359) ##22 rab8a (ENSATEG00000021347) CIB3 (ENSATEG00000021337) admp (ENSATEG00000021331) pnhd (ENSATEG00000021324) ENSATEG00000021312 ENSATEG00000021305 ranbp3b (ENSATEG00000021252) ENSATEG00000027297 ENSATEG00000021222 ENSATEG00000021032 CDCP2 (ENSATEG00000020980) TCEANC2 (ENSATEG00000020971) tmem59 (ENSATEG00000020933) lrrc42 (ENSATEG00000020965) yipf1 (ENSATEG00000020920) Climbing perch MODERN SPECIES 17 ENSATEG00000004765 gna11a (ENSATEG00000026186) gna15.4 (ENSATEG00000004814) ENSATEG00000004832 cdc34a (ENSATEG00000004839) ap3d1 (ENSATEG00000004868) ENSATEG00000026130 ENSATEG00000027973 ENSATEG00000004915 fam32a (ENSATEG00000004935) ENSATEG00000025645 safb (ENSATEG00000004975) lpl (ENSATEG00000005074) ENSATEG00000005125 ENSATEG00000005133 TPM4 (ENSATEG00000027105) ##22 ENSATEG00000005191 ENSATEG00000005445 HSH2D (ENSATEG00000005494) tax1bp3 (ENSATEG00000026821) slc1a6 (ENSATEG00000005560) ENSATEG00000005613 pole4 (ENSATEG00000005624) ENSATEG00000005664 ENSATEG00000005955 gclm (ENSATEG00000005960) dnttip2 (ENSATEG00000005987) ENSATEG00000006008 AGBL4 (ENSATEG00000006056) bend5 (ENSATEG00000028519) elavl4 (ENSATEG00000006136) Ovalentaria ANCESTRAL SPECIES 9 ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000167938 ENSGT00940000164336 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 Ovalentaria_B ANCESTRAL SPECIES 8 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000164336 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a ENSGT00390000001724.l Cichlidae ANCESTRAL SPECIES 17 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000164336 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00390000001724.l ENSGT00940000155042.a.a Midas cichlid MODERN SPECIES 83 gna11a (ENSACIG00000006604) gna15.4 (ENSACIG00000006582) C2CD4C (ENSACIG00000006571) cdc34a (ENSACIG00000006556) ap3d1 (ENSACIG00000006507) hdgfl2 (ENSACIG00000006475) fh (ENSACIG00000006461) fam32a (ENSACIG00000006449) mrpl54 (ENSACIG00000006438) malt2 (ENSACIG00000006358) safb (ENSACIG00000006247) lpl (ENSACIG00000004762) ENSACIG00000004580 ENSACIG00000004544 ENSACIG00000004541 TPM4 (ENSACIG00000004524) ##22 ENSACIG00000004508 ENSACIG00000004294 HSH2D (ENSACIG00000004257) tax1bp3 (ENSACIG00000004244) slc1a6 (ENSACIG00000004218) ENSACIG00000004204 pole4 (ENSACIG00000004187) ENSACIG00000004173 ccl25b (ENSACIG00000004151) gclm (ENSACIG00000004106) ENSACIG00000004083 Pseudocrenilabrinae ANCESTRAL SPECIES 267 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 Pseudocrenilabrinae_A ANCESTRAL SPECIES 266 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 742 ENSNBRG00000023122 ENSNBRG00000023127 ##22 Lyretail cichlid MODERN SPECIES 361 gna11a (ENSNBRG00000000924) gna15.4 (ENSNBRG00000000829) C2CD4C (ENSNBRG00000000816) cdc34a (ENSNBRG00000000763) ap3d1 (ENSNBRG00000000657) hdgfl2 (ENSNBRG00000000615) fh (ENSNBRG00000000602) fam32a (ENSNBRG00000000590) mrpl54 (ENSNBRG00000000568) malt2 (ENSNBRG00000000521) ENSNBRG00000000496 lpl (ENSNBRG00000000484) ENSNBRG00000000438 ENSNBRG00000000388 ENSNBRG00000000374 ##22 ENSNBRG00000023870 ##22 ENSNBRG00000023865 RAB8A (ENSNBRG00000023852) ENSNBRG00000023842 tax1bp3 (ENSNBRG00000023836) slc1a6 (ENSNBRG00000023828) ENSNBRG00000023820 pole4 (ENSNBRG00000023813) ENSNBRG00000023807 ENSNBRG00000023804 gclm (ENSNBRG00000023798) ENSNBRG00000023794 bend5 (ENSNBRG00000023790) ENSNBRG00000023787 AGBL4 (ENSNBRG00000023778) ENSNBRG00000023764 Pomacentridae ANCESTRAL SPECIES 287 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000164336 Pomacentridae_A ANCESTRAL SPECIES 311 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000164336 Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 2278 ENSAPOG00000021572 ##22 ENSAPOG00000021447 RAB8A (ENSAPOG00000021433) ENSAPOG00000021384 tax1bp3 (ENSAPOG00000021364) slc1a6 (ENSAPOG00000021342) Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 187 C2CD4C (ENSAPOG00000022972) cdc34a (ENSAPOG00000022963) ap3d1 (ENSAPOG00000022902) hdgfl2 (ENSAPOG00000022723) ENSAPOG00000022684 fh (ENSAPOG00000022666) fam32a (ENSAPOG00000000646) mrpl54 (ENSAPOG00000022643) malt2 (ENSAPOG00000022621) safb (ENSAPOG00000022508) lpl (ENSAPOG00000022490) ENSAPOG00000022445 ENSAPOG00000022395 ENSAPOG00000022339 ENSAPOG00000022320 ##22 ENSAPOG00000000848 ##22 ENSAPOG00000022298 Spiny chromis MODERN SPECIES 3864 ENSAPOG00000013771 ##22 ENSAPOG00000013786 Atherinomorphae ANCESTRAL SPECIES 7 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000167938 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a Oryzias ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.xb ##22 Oryzias_b ANCESTRAL SPECIES 15 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ENSGT00940000162569.b.k.a ENSGT00940000165296 ENSGT00940000161259.B.a ENSGT00940000164811.a.a ENSGT00550000075067 ENSGT00940000153942.a.f ENSGT00950000183122.A ENSGT00390000013811 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000155916 ENSGT00940000157178.h ENSGT00940000166556 ENSGT00940000165061 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00950000182891.a.a.b.a.a ENSGT01030000234542.b.b.a.a.a.b.wb.a.b ##22 ENSGT00940000157246.b ENSGT00940000161678 ENSGT00390000002877 ENSGT00940000159972 ENSGT00940000169504 ENSGT00940000160888 ENSGT00940000165287.a.b ENSGT00900000141362.a.b ENSGT00510000047658 ENSGT00510000048142 ENSGT00940000175969 ENSGT00530000063821.a ENSGT00940000155042.a.a Javanese ricefish MODERN SPECIES 18 org (ENSOJAG00000015705) oaz1a (ENSOJAG00000015725) amh (ENSOJAG00000015770) fkbp8 (ENSOJAG00000016233) ssbp4 (ENSOJAG00000016362) tmem59l (ENSOJAG00000016651) ENSOJAG00000016665 fh (ENSOJAG00000016667) fam32a (ENSOJAG00000016675) mrpl54 (ENSOJAG00000016694) malt2 (ENSOJAG00000016716) safb (ENSOJAG00000016731) lpl (ENSOJAG00000016761) ENSOJAG00000017070 ENSOJAG00000017104 tpm4b (ENSOJAG00000017192) ##22 ENSOJAG00000017984 ENSOJAG00000018131 ENSOJAG00000018154 ENSOJAG00000003687 ENSOJAG00000003715 tax1bp3 (ENSOJAG00000003731) slc1a6 (ENSOJAG00000003832) ENSOJAG00000004000 pole4 (ENSOJAG00000004015) ENSOJAG00000004027 ccl25b (ENSOJAG00000004040) gclm (ENSOJAG00000004059) ENSOJAG00000004071 ENSOJAG00000004088 ENSOJAG00000004113 Cyprinodontiformes ANCESTRAL SPECIES 217 ENSGT00940000177949 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 Cyprinodontoidei ANCESTRAL SPECIES 259 ENSGT00940000177949 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 Poeciliinae ANCESTRAL SPECIES 169 ENSGT00940000177949 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 Poecilia ANCESTRAL SPECIES 16 ENSGT00940000155404.i.a ENSGT00940000164530 ENSGT00690000103893 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00940000163917.a.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000155464.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT01030000234542.b.b.a.a.a.b.wb.a.a ##22 ENSGT00940000177949 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000157246.a ENSGT00940000160466 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000165287.a.a ENSGT00900000141362.a.a ENSGT00940000158588 ENSGT00950000182993.A.a.j ENSGT00940000165636 ENSGT00940000155060.C.a.a ENSGT00940000158291 ENSGT00390000014384 ENSGT00390000008279.a ENSGT00390000002727 ENSGT00390000010157.a Guppy MODERN SPECIES 447 arhgef18a (ENSPREG00000013555) insra (ENSPREG00000013525) mfsd14a2 (ENSPREG00000013489) ENSPREG00000013319 ENSPREG00000013268 nmrk2 (ENSPREG00000013253) ATCAY (ENSPREG00000013212) rx2 (ENSPREG00000013196) cplx4c (ENSPREG00000013180) ENSPREG00000012428 ENSPREG00000012309 ENSPREG00000012272 klf2b (ENSPREG00000012250) ap1m1 (ENSPREG00000012177) ENSPREG00000012162 tpm4b (ENSPREG00000012127) ##22 rab8a (ENSPREG00000012101) CIB3 (ENSPREG00000012084) admp (ENSPREG00000012066) pnhd (ENSPREG00000012007) ENSPREG00000011988 ENSPREG00000011968 ranbp3b (ENSPREG00000011887) ENSPREG00000011869 ENSPREG00000011853 ptprfb (ENSPREG00000011801) ENSPREG00000011767 CDCP2 (ENSPREG00000011742) tceanc2 (ENSPREG00000011727) tmem59 (ENSPREG00000011659) lrrc42 (ENSPREG00000011580) NAME_6 ANCESTRAL SPECIES ENSGT01030000234542.b.b.a.a.a.b.xb ##22 Amazon molly MODERN SPECIES 401 arhgef18a (ENSPFOG00000004448) insra (ENSPFOG00000003462) mfsd14a2 (ENSPFOG00000003232) ENSPFOG00000002967 ENSPFOG00000020950 loxl5b (ENSPFOG00000002741) nmrk2 (ENSPFOG00000022405) ATCAY (ENSPFOG00000023322) rx2 (ENSPFOG00000002677) cplx4c (ENSPFOG00000002659) ENSPFOG00000002333 ENSPFOG00000002251 ENSPFOG00000001932 klf2b (ENSPFOG00000001804) ap1m1 (ENSPFOG00000001693) tpm4b (ENSPFOG00000001525) ##22 rab8a (ENSPFOG00000001392) CIB3 (ENSPFOG00000001268) admp (ENSPFOG00000001182) pnhd (ENSPFOG00000001123) ENSPFOG00000001072 ENSPFOG00000001038 ranbp3b (ENSPFOG00000000891) ENSPFOG00000000772 ENSPFOG00000023972 ptprfb (ENSPFOG00000000123) Sailfin molly MODERN SPECIES 300 ENSPLAG00000023606 ##22 ENSPLAG00000023590 RAB8A (ENSPLAG00000023580) ENSPLAG00000023536 tax1bp3 (ENSPLAG00000023522) slc1a6 (ENSPLAG00000023498) ENSPLAG00000023471 pole4 (ENSPLAG00000023461) ENSPLAG00000023441 ccl25b (ENSPLAG00000023426) gclm (ENSPLAG00000023420) dnttip2 (ENSPLAG00000023383) ENSPLAG00000023375 AGBL4 (ENSPLAG00000023355) bend5 (ENSPLAG00000000680) Protacanthopterygii ANCESTRAL SPECIES 567 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000164336 Northern pike MODERN SPECIES 7 rx1 (ENSELUG00000034019) cherp (ENSELUG00000023026) ENSELUG00000000980 ENSELUG00000022861 rad23ab (ENSELUG00000022805) EPS15L1 (ENSELUG00000022752) klf2a (ENSELUG00000022520) ap1m1 (ENSELUG00000022484) fam32a (ENSELUG00000022400) mrpl54 (ENSELUG00000031212) malt2 (ENSELUG00000027940) safb (ENSELUG00000022327) ENSELUG00000022121 ENSELUG00000022108 lpl (ENSELUG00000022097) TPM4 (ENSELUG00000022037) ##22 ENSELUG00000021994 ENSELUG00000021949 hsh2d (ENSELUG00000028438) tax1bp3 (ENSELUG00000025961) slc1a6 (ENSELUG00000021906) ccl44 (ENSELUG00000021883) pole4 (ENSELUG00000025074) ENSELUG00000021846 ccl25b (ENSELUG00000021813) ctns (ENSELUG00000021756) RANBP3 (ENSELUG00000021738) ENSELUG00000021701 NDUAB (ENSELUG00000030012) VMAC (ENSELUG00000021677) larp6b (ENSELUG00000031284) Salmoninae ANCESTRAL SPECIES 11 ENSGT00940000166556.a ENSGT00940000157178.h.h ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000164336 ENSGT01030000234542.b.b.a.a.a.b.wb.a.b.b ##22 ENSGT00950000182891.a.a.b.a.a.c ENSGT00940000157246.b.a ENSGT00940000161678.eb ENSGT00390000002877.g ENSGT00940000159972.i.b ENSGT01030000235192.d ENSGT00940000160888.d ENSGT00900000141362.a.b.b ENSGT00390000005338.a ENSGT00940000158588.d.a.b ENSGT00950000182993.A.a.i.c ENSGT00390000012434.a ENSGT00390000007212.d Huchen MODERN SPECIES 1876 TPM4 (ENSHHUG00000013592) ##22 rab8a (ENSHHUG00000013566) CIB3 (ENSHHUG00000013557) ENSHHUG00000013548 admp (ENSHHUG00000013541) ENSHHUG00000013529 RANBP3 (ENSHHUG00000013500) ENSHHUG00000013453 ENSHHUG00000013423 ENSHHUG00000013415 lrrc42 (ENSHHUG00000013400) LDLRAD1 (ENSHHUG00000013395) ENSHHUG00000013391 tmem59 (ENSHHUG00000013387) tceanc2 (ENSHHUG00000013383) ENSHHUG00000013380 Salmoninae_a ANCESTRAL SPECIES 878 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000164336 Oncorhynchus ANCESTRAL SPECIES 736 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000164336 Oncorhynchus_a ANCESTRAL SPECIES 855 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000164336 Chinook salmon MODERN SPECIES 1 ENSOTSG00005033557 uck2b (ENSOTSG00005033558) czib (ENSOTSG00005033561) scp2a (ENSOTSG00005033565) slc1a7a (ENSOTSG00005033588) ENSOTSG00005033589 nadkb (ENSOTSG00005033595) SKIL (ENSOTSG00005033597) ENSOTSG00005033598 DAPK3 (ENSOTSG00005033599) lsm7 (ENSOTSG00005033601) sppl2 (ENSOTSG00005033602) arhgef18a (ENSOTSG00005033606) ENSOTSG00005033608 insra (ENSOTSG00005033612) tpm4b (ENSOTSG00005033626) ##22 rab8a (ENSOTSG00005033728) CIB3 (ENSOTSG00005033731) ENSOTSG00005033732 pnhd (ENSOTSG00005033733) admp (ENSOTSG00005033734) ENSOTSG00005033735 ranbp3b (ENSOTSG00005033736) ENSOTSG00005033737 ENSOTSG00005033738 ENSOTSG00005033740 ENSOTSG00005033741 lrrc42 (ENSOTSG00005033742) tmem59 (ENSOTSG00005033744) tceanc2 (ENSOTSG00005033745) CDCP2 (ENSOTSG00005033746) Coho salmon MODERN SPECIES 4 ZFR2 (ENSOKIG00005017037) MATK (ENSOKIG00005016967) rx1 (ENSOKIG00005016935) cherp (ENSOKIG00005016642) ENSOKIG00005016573 ENSOKIG00005016559 EPS15L1 (ENSOKIG00005016409) klf2a (ENSOKIG00005016373) ap1m1 (ENSOKIG00005016315) fam32a (ENSOKIG00005016293) mrpl54 (ENSOKIG00005016282) malt2 (ENSOKIG00005016238) safb (ENSOKIG00005016195) ENSOKIG00005016136 lpl (ENSOKIG00005016042) TPM4 (ENSOKIG00005015593) ##22 ENSOKIG00005015550 RAB8A (ENSOKIG00005015521) hsh2d (ENSOKIG00005015515) tax1bp3 (ENSOKIG00005015499) slc1a6 (ENSOKIG00005015460) pole4 (ENSOKIG00005015425) ccl25b (ENSOKIG00005015413) RANBP3 (ENSOKIG00005015396) ENSOKIG00005015389 ENSOKIG00005015380 ENSOKIG00005015375 ndufa11 (ENSOKIG00005015366) VMAC (ENSOKIG00005015362) TIMM13 (ENSOKIG00005015341) cers4a (ENSOKIG00005015221) Otomorpha ANCESTRAL SPECIES 719 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000155363.w Otophysi ANCESTRAL SPECIES 543 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000155363.w Cyprinoidei ANCESTRAL SPECIES 366 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000155363.w Zebrafish MODERN SPECIES 11 upf1 (ENSDARG00000016302) pgpep1 (ENSDARG00000054666) jund (ENSDARG00000067850) ENSDARG00000097617 loxl5b (ENSDARG00000076904) nmrk2 (ENSDARG00000067848) ENSDARG00000112703 ATCAY (ENSDARG00000059781) cplx4c (ENSDARG00000094889) rx2 (ENSDARG00000040321) calr3b (ENSDARG00000102808) ENSDARG00000100700 klf2b (ENSDARG00000040432) ap1m1 (ENSDARG00000096249) LPL (ENSDARG00000098720) tpm4b (ENSDARG00000019128) ##22 rab8a (ENSDARG00000067920) CIB3 (ENSDARG00000091072) ENSDARG00000001817 ENSDARG00000116404 rnf126 (ENSDARG00000104076) twsg1a (ENSDARG00000104244) ankrd12 (ENSDARG00000052419) ndufv2 (ENSDARG00000013044) acss2l (ENSDARG00000069029) ENSDARG00000091408 rab12 (ENSDARG00000089428) napgb (ENSDARG00000043012) ENSDARG00000112723 PIEZO2 (ENSDARG00000107086) ENSDARG00000099376 Cyprininae ANCESTRAL SPECIES 142 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000155363.w ENSGT00940000160466.b ENSGT00940000165063.h ENSGT00390000005847.b ENSGT00940000165287.a.a ENSGT00900000141362.a.a.f ENSGT00900000141362.a.a.e.b ENSGT00940000158588.j.a ENSGT00940000156466.db.b ENSGT00950000182993.A.a.j.c.b ENSGT00390000007336.a.b.b ENSGT00940000154456.hb.a.f ENSGT00390000005826.b.f.b ENSGT00940000159325.b ENSGT00950000182982.A.b.v Cyprininae_a ANCESTRAL SPECIES 162 ENSGT00390000015368.a.a.c.b ENSGT00940000162806.b.a ENSGT00940000154779.a.a.c.a ENSGT00940000165007.a.b ENSGT00940000158364.a.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b.a ENSGT00950000182915.b.b.a.b.c.b.b ENSGT00940000155438.a.r ENSGT00940000164495.c.a.b ENSGT00940000157924.f ENSGT01030000234542.b.b.a.a.a.b.wb.b.b ##22 ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b.a ##22 ENSGT01030000234542.b.b.b ##22 ENSGT01030000234542.b.b.a.a.a.b.xb ##22 ENSGT00940000157246.a.a ENSGT00940000160466.a ENSGT00940000165063.h ENSGT00390000005847.b ENSGT00940000165287.a.a ENSGT01000000214896.B ENSGT00900000141362.a.a.e.b ENSGT00940000158588.j.a ENSGT00940000156466.db.b ENSGT00390000007336.a.b.b ENSGT00940000154456.hb.a.f ENSGT00390000005826.b.f.b ENSGT00940000159325.b ENSGT00950000182982.A.b.v ENSGT00940000166845.e.b Common carp reference MODERN SPECIES 5 slc30a7 (ENSCCRG00000062176) dph5 (ENSCCRG00000009947) s1pr1 (ENSCCRG00000077231) zbtb37 (ENSCCRG00000058765) rc3h1a (ENSCCRG00000009923) ENSCCRG00000070407 stil (ENSCCRG00000009902) klf2a (ENSCCRG00000056007) ENSCCRG00000053782 ENSCCRG00000030396 fam32a (ENSCCRG00000030395) malt2 (ENSCCRG00000030392) safb (ENSCCRG00000006057) ENSCCRG00000006036 ENSCCRG00000059515 ENSCCRG00000004596 ##22 lpl (ENSCCRG00000005349) hsh2d (ENSCCRG00000004543) gpc1a (ENSCCRG00000069461) gpc5b (ENSCCRG00000008850) rpp21 (ENSCCRG00000008861) tmem264 (ENSCCRG00000063855) rrp36 (ENSCCRG00000029413) ENSCCRG00000032115 ENSCCRG00000077332 mfng (ENSCCRG00000032103) ENSCCRG00000063271 gtpbp1l (ENSCCRG00000058544) ENSCCRG00000059483 ENSCCRG00000040437 ENSCCRG00000004336 Golden-line barbel DUPLICATION Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 455 ENSSGRG00000002108 rab11bb (ENSSGRG00000004582) CTXN1 (ENSSGRG00000004684) ENSSGRG00000004686 HOMER3 (ENSSGRG00000004689) upf1 (ENSSGRG00000004701) pgpep1 (ENSSGRG00000004992) jund (ENSSGRG00000004993) nmrk2 (ENSSGRG00000004999) ATCAY (ENSSGRG00000005215) ENSSGRG00000005235 ENSSGRG00000006659 klf2b (ENSSGRG00000006665) ap1m1 (ENSSGRG00000006676) LPL (ENSSGRG00000006955) ENSSGRG00000007137 ##22 ENSSGRG00000007642 CIB3 (ENSSGRG00000007644) admp (ENSSGRG00000007661) admp (ENSSGRG00000007662) pnhd (ENSSGRG00000007668) ENSSGRG00000007669 ENSSGRG00000007670 ranbp3b (ENSSGRG00000007676) capsla (ENSSGRG00000007726) ENSSGRG00000007727 Golden-line barbel MODERN SPECIES 5255 ENSSGRG00000004501 ##22 Golden-line barbel MODERN SPECIES 215 ENSSGRG00000042060 upf1 (ENSSGRG00000041785) pgpep1 (ENSSGRG00000041779) jund (ENSSGRG00000041777) loxl5b (ENSSGRG00000041775) nmrk2 (ENSSGRG00000041715) ENSSGRG00000041711 ATCAY (ENSSGRG00000041709) cplx4c (ENSSGRG00000041707) ENSSGRG00000040310 ENSSGRG00000040301 klf2b (ENSSGRG00000040298) AP1M1 (ENSSGRG00000040228) LPL (ENSSGRG00000039985) ENSSGRG00000039983 ##22 ENSSGRG00000039982 ##22 rab8a (ENSSGRG00000039981) CIB3 (ENSSGRG00000039980) admp (ENSSGRG00000039978) pnhd (ENSSGRG00000039977) ENSSGRG00000039973 ENSSGRG00000039969 ranbp3b (ENSSGRG00000039967) capsla (ENSSGRG00000039964) ABHD8 (ENSSGRG00000039962) ENSSGRG00000039961 ENSSGRG00000039956 napgb (ENSSGRG00000039419) rab12 (ENSSGRG00000039414) MTCL1 (ENSSGRG00000039413) acss2l (ENSSGRG00000039237) Reedfish DUPLICATION Reedfish MODERN SPECIES 3 ENSECRG00000014645 pole4 (ENSECRG00000014612) ENSECRG00000014532 ccl44 (ENSECRG00000014482) ap1m1 (ENSECRG00000021503) klf2a (ENSECRG00000021488) EPS15L1 (ENSECRG00000021345) rad23ab (ENSECRG00000021283) ENSECRG00000021258 ENSECRG00000021228 cherp (ENSECRG00000021185) safb (ENSECRG00000021157) ENSECRG00000021134 ENSECRG00000021108 lpl (ENSECRG00000021080) tpm4a (ENSECRG00000021040) ##22 ENSECRG00000020997 fam32a (ENSECRG00000020977) rab11bb (ENSECRG00000020927) marchf2 (ENSECRG00000020862) ENSECRG00000020844 hnrnpm (ENSECRG00000020813) timm44 (ENSECRG00000020763) SEMA6B (ENSECRG00000020725) plin3 (ENSECRG00000020698) hdgfl2 (ENSECRG00000020668) ubxn6 (ENSECRG00000020639) CHAF1A (ENSECRG00000020620) sh3gl1b (ENSECRG00000020585) mpnd (ENSECRG00000020567) stap2b (ENSECRG00000020533) Reedfish MODERN SPECIES 3 BRS3 (ENSECRG00000012972) ENSECRG00000012952 ENSECRG00000012928 MAP7D3 (ENSECRG00000012834) fhl1b (ENSECRG00000012785) slc9a6b (ENSECRG00000012652) mmgt1 (ENSECRG00000012568) ints6l (ENSECRG00000012532) mospd1 (ENSECRG00000012515) ENSECRG00000012504 pabir2 (ENSECRG00000012473) hprt1 (ENSECRG00000012445) phf6 (ENSECRG00000012420) cab39l1 (ENSECRG00000012409) ENSECRG00000012393 ENSECRG00000012343 ##22 gpc3 (ENSECRG00000012308) gpc4 (ENSECRG00000012276) hs6st2 (ENSECRG00000012263) mbnl3 (ENSECRG00000012236) ENSECRG00000012201 rap2c (ENSECRG00000012181) ENSECRG00000012165 ENSECRG00000012129 zgc:92907 (ENSECRG00000012110) il2rgb (ENSECRG00000012091) ENSECRG00000012076 FOXO4 (ENSECRG00000012058) snx12 (ENSECRG00000012044) SLC7A3 (ENSECRG00000012024) ubl3b (ENSECRG00000012000)