Rodentia	ANCESTRAL SPECIES	13	ENSGT00940000155800	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00900000143434	ENSGT00940000157456 #30	ENSGT00940000163662	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35
Rodentia_B	ANCESTRAL SPECIES	19	ENSGT00940000155800	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00940000157456 #30	ENSGT00940000163662	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35	ENSGT00590000083165 #37
Myomorpha	ANCESTRAL SPECIES	19	ENSGT00940000155800	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00940000157456 #30	ENSGT00940000163662	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35	ENSGT00590000083165 #37
Muroidea	ANCESTRAL SPECIES	17	ENSGT00940000155800	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00940000157456 #30	ENSGT00940000163662	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35	ENSGT00590000083165 #37
Muroidea_A	ANCESTRAL SPECIES	13	ENSGT00940000155800	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00940000157456 #30	ENSGT00940000163662	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35	ENSGT00590000083165 #37
Cricetidae	ANCESTRAL SPECIES	14	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT01030000234945	ENSGT00940000157221 #22	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00940000157456 #30	ENSGT00940000163662	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35	ENSGT00590000083165 #37
Cricetinae	ANCESTRAL SPECIES	9	ENSGT00940000155800	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00940000157456 #30	ENSGT00940000163662	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35	ENSGT00590000083165 #37
Golden Hamster	MODERN SPECIES	663														ENSMAUG00000015885 #20	ENSMAUG00000016216 #21	Pcdh7 (ENSMAUG00000010506) #22	Arap2 (ENSMAUG00000008087) #23	Dthd1 (ENSMAUG00000005079) #24	Nwd2 (ENSMAUG00000004008) #25	0610040J01Rik (ENSMAUG00000001342) #26	Rell1 (ENSMAUG00000015257) #27	Pgm2 (ENSMAUG00000009577) #28	Tbc1d1 (ENSMAUG00000010694) #29	Klf3 (ENSMAUG00000000706) #30	Tlr1 (ENSMAUG00000000142) #31	Tlr6 (ENSMAUG00000007865) #32	Fam114a1 (ENSMAUG00000001743) #33	Tmem156 (ENSMAUG00000000185) #34	Klhl5 (ENSMAUG00000019052) #35	ENSMAUG00000008307 #36	ENSMAUG00000004466 #37
Chinese hamster chok1gshd	MODERN SPECIES	44	Zcchc4 (ENSCGRG00001014205)	ENSCGRG00001016709	Anapc4 (ENSCGRG00001021562)	Slc34a2 (ENSCGRG00001019379)	Sel1l3 (ENSCGRG00001023792)	Smim20 (ENSCGRG00001010352)	ENSCGRG00001010832	Rbpj (ENSCGRG00001016640)	Cckar (ENSCGRG00001015331)	Tbc1d19 (ENSCGRG00001021066)	ENSCGRG00001004312	Stim2 (ENSCGRG00001012517)	ENSCGRG00001002941	ENSCGRG00001005160	ENSCGRG00001012415	Pcdh7 (ENSCGRG00001017637) #22	ENSCGRG00001018983	ENSCGRG00001009672	Arap2 (ENSCGRG00001019683) #23	Dthd1 (ENSCGRG00001007560) #24	ENSCGRG00001015981	ENSCGRG00001005701	Nwd2 (ENSCGRG00001014796) #25	0610040J01Rik (ENSCGRG00001016782) #26	ENSCGRG00001017215 #27	Pgm2 (ENSCGRG00001019866) #28	Tbc1d1 (ENSCGRG00001007939) #29	Klf3 (ENSCGRG00001011019) #30	ENSCGRG00001011588	Tlr1 (ENSCGRG00001012288) #31	Tlr6 (ENSCGRG00001012094) #32
Cricetidae_B	ANCESTRAL SPECIES	9	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT01030000234945	ENSGT00940000157221 #22	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00940000157456 #30	ENSGT00940000162884 #31	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35	ENSGT00590000083165 #37	ENSGT00730000111066	ENSGT00940000157489
Prairie vole	MODERN SPECIES	349	Ddc (ENSMOCG00000014117)	Grb10 (ENSMOCG00000013383)	Cobl (ENSMOCG00000016899)	ENSMOCG00000001123	ENSMOCG00000001110	Slc34a2 (ENSMOCG00000000230)	Sel1l3 (ENSMOCG00000013009)	Smim20 (ENSMOCG00000017669)	ENSMOCG00000018816	Cckar (ENSMOCG00000004693)	Tbc1d19 (ENSMOCG00000013897)	Stim2 (ENSMOCG00000017892)	ENSMOCG00000000264	ENSMOCG00000004908	ENSMOCG00000017801	Pcdh7 (ENSMOCG00000019554) #22	ENSMOCG00000016594	ENSMOCG00000017532	Arap2 (ENSMOCG00000008948) #23	Dthd1 (ENSMOCG00000019885) #24	Nwd2 (ENSMOCG00000002726) #25	ENSMOCG00000004195	0610040J01Rik (ENSMOCG00000010145) #26	Rell1 (ENSMOCG00000013662) #27	Pgm2 (ENSMOCG00000002142) #28	Tbc1d1 (ENSMOCG00000000703) #29	ENSMOCG00000020501	ENSMOCG00000005398	ENSMOCG00000002752 #30	Fam114a1 (ENSMOCG00000003632) #33	Tmem156 (ENSMOCG00000011114) #34
Northern American deer mouse	MODERN SPECIES	1	Tlr1 (ENSPEMG00000005760) #31	Klf3 (ENSPEMG00000026686) #30	ENSPEMG00000027929	Tbc1d1 (ENSPEMG00000001751) #29	Pgm2 (ENSPEMG00000000146) #28	Rell1 (ENSPEMG00000019052) #27	0610040J01Rik (ENSPEMG00000018765) #26	Nwd2 (ENSPEMG00000018695) #25	Dthd1 (ENSPEMG00000018338) #24	Arap2 (ENSPEMG00000017210) #23	ENSPEMG00000029590	ENSPEMG00000014650	ENSPEMG00000029628	ENSPEMG00000026158	ENSPEMG00000025746	Pcdh7 (ENSPEMG00000012079) #22	ENSPEMG00000008427	Stim2 (ENSPEMG00000013752)	Tbc1d19 (ENSPEMG00000010326)	Cckar (ENSPEMG00000025192)	Rbpj (ENSPEMG00000010386)	Smim20 (ENSPEMG00000030098)	Sel1l3 (ENSPEMG00000020373)	Slc34a2 (ENSPEMG00000007479)	Anapc4 (ENSPEMG00000014070)	ENSPEMG00000029080	Zcchc4 (ENSPEMG00000013522)	Pi4k2b (ENSPEMG00000007793)	Sepsecs (ENSPEMG00000006742)	Lgi2 (ENSPEMG00000011026)	Ccdc149 (ENSPEMG00000012229)
Murinae	ANCESTRAL SPECIES	12	ENSGT00940000155800	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00940000157456 #30	ENSGT00940000163662	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35	ENSGT00590000083165 #37
Rat	MODERN SPECIES	5	Lgi2 (ENSRNOG00000066201)	Sepsecs (ENSRNOG00000049244)	Pi4k2b (ENSRNOG00000003924)	Zcchc4 (ENSRNOG00000029064)	Anapc4 (ENSRNOG00000004130)	Slc34a2 (ENSRNOG00000004626)	Sel1l3 (ENSRNOG00000004932)	AABR07015507.1 (ENSRNOG00000051190)	LOC100361259 (ENSRNOG00000055911)	Rbpj (ENSRNOG00000046327)	Cckar (ENSRNOG00000043124)	Tbc1d19 (ENSRNOG00000003003)	Stim2 (ENSRNOG00000002956)	ENSRNOG00000067114	Pcdh7 (ENSRNOG00000012367)	Pcdh7 (ENSRNOG00000063828) #22	ENSRNOG00000067336	AABR07015346.1 (ENSRNOG00000027791)	ENSRNOG00000065159	LOC108348204 (ENSRNOG00000063351)	ENSRNOG00000065472	Arap2 (ENSRNOG00000056826) #23	AABR07015180.1 (ENSRNOG00000026134)	Nwd2 (ENSRNOG00000051837) #25	LOC498368 (ENSRNOG00000002191) #26	Rell1 (ENSRNOG00000002192) #27	Pgm2 (ENSRNOG00000002185) #28	Tbc1d1 (ENSRNOG00000002180) #29	Klf3 (ENSRNOG00000002163) #30	Tlr10 (ENSRNOG00000067138)	Tlr1 (ENSRNOG00000038722) #31
Mus	ANCESTRAL SPECIES	14	ENSGT00940000155800	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00530000063435.a.p	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00940000157456 #30	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35	ENSGT00590000083165 #37
Shrew mouse	MODERN SPECIES	4	Dhx15 (MGP_PahariEiJ_G0016996)	Sod3 (MGP_PahariEiJ_G0016997)	Ccdc149 (MGP_PahariEiJ_G0016998)	Lgi2 (MGP_PahariEiJ_G0016999)	Sepsecs (MGP_PahariEiJ_G0017000)	Pi4k2b (MGP_PahariEiJ_G0017001)	Zcchc4 (MGP_PahariEiJ_G0017002)	Anapc4 (MGP_PahariEiJ_G0017003)	Slc34a2 (MGP_PahariEiJ_G0017004)	Sel1l3 (MGP_PahariEiJ_G0017005)	Smim20 (MGP_PahariEiJ_G0017006)	Rbpj (MGP_PahariEiJ_G0017007)	Cckar (MGP_PahariEiJ_G0017008)	Tbc1d19 (MGP_PahariEiJ_G0017009)	Stim2 (MGP_PahariEiJ_G0017010)	Pcdh7 (MGP_PahariEiJ_G0017011) #22	G6pd2 (MGP_PahariEiJ_G0017012)	Arap2 (MGP_PahariEiJ_G0017013) #23	Dthd1 (MGP_PahariEiJ_G0017014) #24	Nwd2 (MGP_PahariEiJ_G0017015) #25	0610040J01Rik (MGP_PahariEiJ_G0017016) #26	Rell1 (MGP_PahariEiJ_G0017017) #27	Pgm2 (MGP_PahariEiJ_G0017018) #28	Tbc1d1 (MGP_PahariEiJ_G0017019) #29	Klf3 (MGP_PahariEiJ_G0017020) #30	Tlr1 (MGP_PahariEiJ_G0017021) #31	Tlr6 (MGP_PahariEiJ_G0017022) #32	Fam114a1 (MGP_PahariEiJ_G0017023) #33	MGP_PahariEiJ_G0017024 #34	Klhl5 (MGP_PahariEiJ_G0017025) #35	Wdr19 (MGP_PahariEiJ_G0017026) #37
Mus_A	ANCESTRAL SPECIES	6	ENSGT00940000155800	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00530000063435.a.p	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00940000157456 #30	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35	ENSGT00590000083165 #37
Ryukyu mouse	MODERN SPECIES	14	Dhx15 (MGP_CAROLIEiJ_G0027214)	Sod3 (MGP_CAROLIEiJ_G0027215)	Ccdc149 (MGP_CAROLIEiJ_G0027216)	Lgi2 (MGP_CAROLIEiJ_G0027217)	Sepsecs (MGP_CAROLIEiJ_G0027218)	Pi4k2b (MGP_CAROLIEiJ_G0027219)	Zcchc4 (MGP_CAROLIEiJ_G0027220)	Anapc4 (MGP_CAROLIEiJ_G0027221)	Slc34a2 (MGP_CAROLIEiJ_G0027222)	Sel1l3 (MGP_CAROLIEiJ_G0027223)	Smim20 (MGP_CAROLIEiJ_G0027224)	MGP_CAROLIEiJ_G0027225	Cckar (MGP_CAROLIEiJ_G0027226)	Tbc1d19 (MGP_CAROLIEiJ_G0027227)	Stim2 (MGP_CAROLIEiJ_G0027228)	Pcdh7 (MGP_CAROLIEiJ_G0027229) #22	G6pd2 (MGP_CAROLIEiJ_G0027230)	Arap2 (MGP_CAROLIEiJ_G0027231) #23	Dthd1 (MGP_CAROLIEiJ_G0027232) #24	Nwd2 (MGP_CAROLIEiJ_G0027233) #25	0610040J01Rik (MGP_CAROLIEiJ_G0027234) #26	Rell1 (MGP_CAROLIEiJ_G0027235) #27	Pgm2 (MGP_CAROLIEiJ_G0027236) #28	MGP_CAROLIEiJ_G0027237	Klf3 (MGP_CAROLIEiJ_G0027238) #30	Tlr1 (MGP_CAROLIEiJ_G0027239) #31	Tlr6 (MGP_CAROLIEiJ_G0027240) #32	Fam114a1 (MGP_CAROLIEiJ_G0027241) #33	MGP_CAROLIEiJ_G0027242 #34	Klhl5 (MGP_CAROLIEiJ_G0027243) #35	Wdr19 (MGP_CAROLIEiJ_G0027244) #37
Mus_B	ANCESTRAL SPECIES	4	ENSGT00940000155800	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00530000063435.a.p	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00940000157456 #30	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35	ENSGT00590000083165 #37
Mouse	MODERN SPECIES	14	Dhx15 (ENSMUSG00000029169)	Sod3 (ENSMUSG00000072941)	Ccdc149 (ENSMUSG00000045790)	Lgi2 (ENSMUSG00000039252)	Sepsecs (ENSMUSG00000029173)	Pi4k2b (ENSMUSG00000029186)	Zcchc4 (ENSMUSG00000029179)	Anapc4 (ENSMUSG00000029176)	Slc34a2 (ENSMUSG00000029188)	Sel1l3 (ENSMUSG00000029189)	Smim20 (ENSMUSG00000061461)	Rbpj (ENSMUSG00000039191)	Cckar (ENSMUSG00000029193)	Tbc1d19 (ENSMUSG00000039178)	Stim2 (ENSMUSG00000039156)	Pcdh7 (ENSMUSG00000029108) #22	G6pd2 (ENSMUSG00000089992)	Arap2 (ENSMUSG00000037999) #23	Dthd1 (ENSMUSG00000090326) #24	Nwd2 (ENSMUSG00000090061) #25	0610040J01Rik (ENSMUSG00000060512) #26	Rell1 (ENSMUSG00000047881) #27	Pgm2 (ENSMUSG00000029171) #28	Tbc1d1 (ENSMUSG00000029174) #29	Klf3 (ENSMUSG00000029178) #30	Tlr1 (ENSMUSG00000044827) #31	Tlr6 (ENSMUSG00000051498) #32	Fam114a1 (ENSMUSG00000029185) #33	Tmem156 (ENSMUSG00000037913) #34	Klhl5 (ENSMUSG00000054920) #35	Wdr19 (ENSMUSG00000037890) #37
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000155800	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00530000063435.a.p	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00940000157456 #30	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35	ENSGT00590000083165 #37
spretus	MODERN SPECIES	14	Dhx15 (MGP_SPRETEiJ_G0028209)	Sod3 (MGP_SPRETEiJ_G0028210)	Ccdc149 (MGP_SPRETEiJ_G0028211)	Lgi2 (MGP_SPRETEiJ_G0028212)	Sepsecs (MGP_SPRETEiJ_G0028213)	Pi4k2b (MGP_SPRETEiJ_G0028214)	Zcchc4 (MGP_SPRETEiJ_G0028215)	Anapc4 (MGP_SPRETEiJ_G0028216)	Slc34a2 (MGP_SPRETEiJ_G0028217)	Sel1l3 (MGP_SPRETEiJ_G0028218)	Smim20 (MGP_SPRETEiJ_G0028219)	MGP_SPRETEiJ_G0028220	Cckar (MGP_SPRETEiJ_G0028221)	Tbc1d19 (MGP_SPRETEiJ_G0028222)	Stim2 (MGP_SPRETEiJ_G0028223)	Pcdh7 (MGP_SPRETEiJ_G0028224) #22	G6pd2 (MGP_SPRETEiJ_G0028225)	Arap2 (MGP_SPRETEiJ_G0028226) #23	Dthd1 (MGP_SPRETEiJ_G0028227) #24	Nwd2 (MGP_SPRETEiJ_G0028228) #25	0610040J01Rik (MGP_SPRETEiJ_G0028229) #26	Rell1 (MGP_SPRETEiJ_G0028230) #27	Pgm2 (MGP_SPRETEiJ_G0028231) #28	Tbc1d1 (MGP_SPRETEiJ_G0028232) #29	Klf3 (MGP_SPRETEiJ_G0028233) #30	Tlr6 (MGP_SPRETEiJ_G0028235) #32	Fam114a1 (MGP_SPRETEiJ_G0028236) #33	MGP_SPRETEiJ_G0028237 #34	Klhl5 (MGP_SPRETEiJ_G0028238) #35	Wdr19 (MGP_SPRETEiJ_G0028239) #37	Rfc1 (MGP_SPRETEiJ_G0028240)
Steppe mouse	MODERN SPECIES	3109													ENSMSIG00000025603	ENSMSIG00000025679	ENSMSIG00000025698	Pcdh7 (ENSMSIG00000025700) #22
Upper Galilee mountains blind mole rat	MODERN SPECIES	568																Pcdh7 (ENSNGAG00000011901) #22
Lesser Egyptian jerboa	MODERN SPECIES	58	Lgi2 (ENSJJAG00000021018)	Sepsecs (ENSJJAG00000001251)	Pi4k2b (ENSJJAG00000021578)	Zcchc4 (ENSJJAG00000016627)	ENSJJAG00000023054	Slc34a2 (ENSJJAG00000023515)	Sel1l3 (ENSJJAG00000018980)	Smim20 (ENSJJAG00000020734)	Rbpj (ENSJJAG00000024408)	Cckar (ENSJJAG00000009819)	Tbc1d19 (ENSJJAG00000015623)	Stim2 (ENSJJAG00000014478)	ENSJJAG00000011152	ENSJJAG00000011305	ENSJJAG00000024218	Pcdh7 (ENSJJAG00000021210) #22	Arap2 (ENSJJAG00000009614) #23	Dthd1 (ENSJJAG00000013536) #24	Nwd2 (ENSJJAG00000011338) #25	Rell1 (ENSJJAG00000015408) #27
Kangaroo rat	MODERN SPECIES	327	Ccdc149 (ENSDORG00000005628)	Lgi2 (ENSDORG00000005632)	Sepsecs (ENSDORG00000012655)	Pi4k2b (ENSDORG00000000491)	ENSDORG00000012901	ENSDORG00000025086	Slc34a2 (ENSDORG00000016105)	Sel1l3 (ENSDORG00000011773)	Smim20 (ENSDORG00000028531)	Rbpj (ENSDORG00000006352)	Cckar (ENSDORG00000006353)	Tbc1d19 (ENSDORG00000013790)	Stim2 (ENSDORG00000016610)	ENSDORG00000028755	ENSDORG00000008260	Pcdh7 (ENSDORG00000029117) #22	ENSDORG00000028110	Arap2 (ENSDORG00000008160) #23	Dthd1 (ENSDORG00000001578) #24	Nwd2 (ENSDORG00000023758) #25	0610040J01Rik (ENSDORG00000011992) #26	Rell1 (ENSDORG00000008354) #27	Pgm2 (ENSDORG00000027647) #28	Tbc1d1 (ENSDORG00000010269) #29	Klf3 (ENSDORG00000023213) #30	Fam114a1 (ENSDORG00000010517) #33	ENSDORG00000010522 #34	Klhl5 (ENSDORG00000010524) #35	Wdr19 (ENSDORG00000010525) #37	Rfc1 (ENSDORG00000010527)	Klb (ENSDORG00000005905)
Rodentia_A	ANCESTRAL SPECIES	20	ENSGT00940000155800	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00900000143434	ENSGT00940000157456 #30	ENSGT00940000163662	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35
Hystricomorpha	ANCESTRAL SPECIES	26	ENSGT00940000155800	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00940000157456 #30	ENSGT00940000163662	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35	ENSGT00590000083165 #37
Hystricomorpha_a	ANCESTRAL SPECIES	23	ENSGT00940000155800	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00940000157456 #30	ENSGT00940000163662	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35	ENSGT00590000083165 #37
Guinea pig	MODERN SPECIES	50	SOD3 (ENSCPOG00000035072)	CCDC149 (ENSCPOG00000008895)	LGI2 (ENSCPOG00000024161)	SEPSECS (ENSCPOG00000035974)	PI4K2B (ENSCPOG00000015398)	ZCCHC4 (ENSCPOG00000011477)	ANAPC4 (ENSCPOG00000013122)	SLC34A2 (ENSCPOG00000024165)	SEL1L3 (ENSCPOG00000001037)	SMIM20 (ENSCPOG00000007684)	ENSCPOG00000040682	RBPJ (ENSCPOG00000007041)	CCKAR (ENSCPOG00000007046)	TBC1D19 (ENSCPOG00000003940)	STIM2 (ENSCPOG00000003408)	PCDH7 (ENSCPOG00000009659) #22	ARAP2 (ENSCPOG00000003037) #23	DTHD1 (ENSCPOG00000012919) #24
Hystricomorpha_b	ANCESTRAL SPECIES	37	ENSGT00950000183137.b.a	ENSGT00940000155800	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00940000157456 #30	ENSGT00940000163662	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35	ENSGT00590000083165 #37
Long-tailed chinchilla	MODERN SPECIES	150				SEPSECS (ENSCLAG00000001790)	PI4K2B (ENSCLAG00000001759)	ZCCHC4 (ENSCLAG00000003884)	ANAPC4 (ENSCLAG00000003544)	ENSCLAG00000002958	SLC34A2 (ENSCLAG00000002636)	SEL1L3 (ENSCLAG00000002362)	SMIM20 (ENSCLAG00000002089)	RBPJ (ENSCLAG00000002065)	CCKAR (ENSCLAG00000001729)	TBC1D19 (ENSCLAG00000001699)	STIM2 (ENSCLAG00000002849)	PCDH7 (ENSCLAG00000002605) #22	ARAP2 (ENSCLAG00000012467) #23	DTHD1 (ENSCLAG00000011952) #24	NWD2 (ENSCLAG00000010818) #25	C4orf19 (ENSCLAG00000010706) #26	RELL1 (ENSCLAG00000010401) #27	PGM2 (ENSCLAG00000010266) #28	TBC1D1 (ENSCLAG00000002236) #29	KLF3 (ENSCLAG00000004459) #30	TLR10 (ENSCLAG00000004336)	TLR1 (ENSCLAG00000017579) #31	TLR6 (ENSCLAG00000017630) #32	FAM114A1 (ENSCLAG00000003993) #33	TMEM156 (ENSCLAG00000003928) #34	KLHL5 (ENSCLAG00000002937) #35	WDR19 (ENSCLAG00000002775) #37
Degu	MODERN SPECIES	47	PI4K2B (ENSODEG00000008999)	ENSODEG00000007449	ENSODEG00000006972	ENSODEG00000019525	SLC34A2 (ENSODEG00000010839)	SEL1L3 (ENSODEG00000008196)	ENSODEG00000007321	ENSODEG00000007277	CCKAR (ENSODEG00000007359)	TBC1D19 (ENSODEG00000007019)	ENSODEG00000008773	ENSODEG00000006518	ENSODEG00000019413	ENSODEG00000006666	ENSODEG00000007600	PCDH7 (ENSODEG00000007387) #22	ENSODEG00000006993	ENSODEG00000019660	ARAP2 (ENSODEG00000006699) #23	DTHD1 (ENSODEG00000007001) #24
Naked mole-rat female	MODERN SPECIES	1	ENSHGLG00000039602	ANAPC4 (ENSHGLG00000004987)	SLC34A2 (ENSHGLG00000012163)	SEL1L3 (ENSHGLG00000011887)	ENSHGLG00000042802	ENSHGLG00000048407	RBPJ (ENSHGLG00000010901)	CCKAR (ENSHGLG00000041648)	TBC1D19 (ENSHGLG00000009465)	ENSHGLG00000009110	ENSHGLG00000038509	ENSHGLG00000008412	ENSHGLG00000020704	ENSHGLG00000038050	ENSHGLG00000042856	ENSHGLG00000007929 #22	ENSHGLG00000032804	ENSHGLG00000008642	ARAP2 (ENSHGLG00000001750) #23	DTHD1 (ENSHGLG00000006344) #24	ENSHGLG00000000242	ENSHGLG00000037767	NWD2 (ENSHGLG00000000298) #25	ENSHGLG00000040844 #26	ENSHGLG00000040492 #26	ENSHGLG00000043452 #27	PGM2 (ENSHGLG00000001842) #28	ENSHGLG00000002323	ENSHGLG00000003063	ENSHGLG00000000606	ENSHGLG00000019811
Sciuridae	ANCESTRAL SPECIES	19	ENSGT00940000155800	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00900000143434	ENSGT00940000157456 #30	ENSGT00940000163662	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00990000210295	ENSGT00390000010054.b #33	ENSGT00390000017929 #34
Eurasian red squirrel	MODERN SPECIES	18	ENSSVLG00005013482	ZCCHC4 (ENSSVLG00005013382)	ANAPC4 (ENSSVLG00005013305)	SLC34A2 (ENSSVLG00005013163)	SEL1L3 (ENSSVLG00005012722)	SMIM20 (ENSSVLG00005012667)	RBPJ (ENSSVLG00005012303)	CCKAR (ENSSVLG00005012173)	TBC1D19 (ENSSVLG00005011905)	ENSSVLG00005011823	STIM2 (ENSSVLG00005011778)	ENSSVLG00005011737	ENSSVLG00005011695	ENSSVLG00005011631	ENSSVLG00005011572	PCDH7 (ENSSVLG00005011515) #22	ENSSVLG00005011423	ARAP2 (ENSSVLG00005010880) #23	DTHD1 (ENSSVLG00005010509) #24	ENSSVLG00005010441 #25	ENSSVLG00005010374 #25	C4orf19 (ENSSVLG00005010352) #26	RELL1 (ENSSVLG00005010318) #27	ENSSVLG00005010293	PGM2 (ENSSVLG00005010275) #28	TBC1D1 (ENSSVLG00005010172) #29	ENSSVLG00005010135	ENSSVLG00005010086 #30	ENSSVLG00005010070	TLR10 (ENSSVLG00005010051)	TLR1 (ENSSVLG00005010028) #31
Marmotini	ANCESTRAL SPECIES	26	ENSGT00940000155800.e	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221 #22	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00900000143434	ENSGT00940000157456 #30	ENSGT00940000163662	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35
Marmotini_b	ANCESTRAL SPECIES	48															ENSGT01030000234945	ENSGT00940000157221 #22	ENSGT00950000182841.b.a.a.b.b.p.a	ENSGT00940000160197 #23	ENSGT00940000153404.b #24	ENSGT00940000153648.b #25	ENSGT00390000013778 #26	ENSGT00940000159709 #27	ENSGT00940000156247 #28	ENSGT00940000157949 #29	ENSGT00940000157456 #30	ENSGT00940000163662	ENSGT00940000162884 #31	ENSGT00940000162201 #32	ENSGT00390000010054.b #33	ENSGT00390000017929 #34	ENSGT00940000155358 #35
Arctic ground squirrel	MODERN SPECIES	2															ENSUPAG00010016796	PCDH7 (ENSUPAG00010016798) #22	ENSUPAG00010016821	ARAP2 (ENSUPAG00010016832) #23	DTHD1 (ENSUPAG00010016950) #24	NWD2 (ENSUPAG00010016964) #25	C4orf19 (ENSUPAG00010016983) #26	RELL1 (ENSUPAG00010016993) #27	PGM2 (ENSUPAG00010017012) #28	TBC1D1 (ENSUPAG00010017027) #29	KLF3 (ENSUPAG00010017209) #30	TLR10 (ENSUPAG00010017218)	TLR1 (ENSUPAG00010017233) #31	TLR6 (ENSUPAG00010017235) #32	FAM114A1 (ENSUPAG00010017240) #33	TMEM156 (ENSUPAG00010017254) #34	KLHL5 (ENSUPAG00010017266) #35
Squirrel	MODERN SPECIES	82																PCDH7 (ENSSTOG00000009192) #22	ENSSTOG00000029131	ENSSTOG00000028351	ARAP2 (ENSSTOG00000019405) #23	DTHD1 (ENSSTOG00000003003) #24	NWD2 (ENSSTOG00000019543) #25	C4orf19 (ENSSTOG00000003425) #26	RELL1 (ENSSTOG00000001374) #27	PGM2 (ENSSTOG00000008176) #28	ENSSTOG00000020687 #29	KLF3 (ENSSTOG00000010881) #30	TLR1 (ENSSTOG00000021581) #31	TLR6 (ENSSTOG00000025480) #32	FAM114A1 (ENSSTOG00000001171) #33	TMEM156 (ENSSTOG00000004246) #34	KLHL5 (ENSSTOG00000007013) #35
Alpin marmot	MODERN SPECIES	9	ENSMMMG00000017220	DHX15 (ENSMMMG00000017227)	CCDC149 (ENSMMMG00000017248)	LGI2 (ENSMMMG00000017262)	SEPSECS (ENSMMMG00000017270)	PI4K2B (ENSMMMG00000017289)	ZCCHC4 (ENSMMMG00000017301)	ANAPC4 (ENSMMMG00000017319)	SLC34A2 (ENSMMMG00000017344)	SEL1L3 (ENSMMMG00000017356)	SMIM20 (ENSMMMG00000017386)	RBPJ (ENSMMMG00000017407)	CCKAR (ENSMMMG00000017438)	STIM2 (ENSMMMG00000017470)	ENSMMMG00000017503	ENSMMMG00000017519 #22	ARAP2 (ENSMMMG00000017527) #23	DTHD1 (ENSMMMG00000017544) #24	NWD2 (ENSMMMG00000017559) #25	ENSMMMG00000017574	C4orf19 (ENSMMMG00000017577) #26	RELL1 (ENSMMMG00000017587) #27	PGM2 (ENSMMMG00000017606) #28	TBC1D1 (ENSMMMG00000017620) #29	ENSMMMG00000017716	KLF3 (ENSMMMG00000017721) #30	TLR10 (ENSMMMG00000017725)	TLR1 (ENSMMMG00000017739) #31	TLR6 (ENSMMMG00000017761) #32	FAM114A1 (ENSMMMG00000017765) #33	TMEM156 (ENSMMMG00000017773) #34