Artiodactyla	ANCESTRAL SPECIES	20	ENSGT00940000154242.b	ENSGT00940000156694 #7	ENSGT00390000009040 #8	ENSGT00940000154185 #9	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032 #27	ENSGT00940000164631	ENSGT00390000014654 #28
Artiodactyla_a	ANCESTRAL SPECIES	20	ENSGT00940000154242.b	ENSGT00940000156694 #7	ENSGT00390000009040 #8	ENSGT00940000154185 #9	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032 #27	ENSGT00940000164631	ENSGT00390000014654 #28
Artiodactyla_b	ANCESTRAL SPECIES	20	ENSGT00940000154242.b	ENSGT00940000156694 #7	ENSGT00390000009040 #8	ENSGT00940000154185 #9	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032 #27	ENSGT00940000164631	ENSGT00390000014654 #28
Cetacea	ANCESTRAL SPECIES	17	ENSGT00940000154242.b	ENSGT00940000156694 #7	ENSGT00390000009040 #8	ENSGT00940000154185.h #9	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT00740000115534.a.b.f.a.b #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032 #27	ENSGT00940000164631	ENSGT00390000014654 #28
Odontoceti	ANCESTRAL SPECIES	20	ENSGT00940000156694 #7	ENSGT00390000009040 #8	ENSGT00940000154185.h #9	ENSGT00940000155121.n ##10	ENSGT00940000155121.m.b ##10	ENSGT00940000159123 #11	ENSGT00390000003289 #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032 #27	ENSGT00390000014654 #28
Odontoceti_a	ANCESTRAL SPECIES	17	ENSGT00940000156694 #7	ENSGT00390000009040 #8	ENSGT00940000154185.h #9	ENSGT00940000155121.n ##10	ENSGT00940000155121.m.a #10	ENSGT00940000159123 #11	ENSGT00390000003289 #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032 #27	ENSGT00390000014654 #28
Odontoceti_b	ANCESTRAL SPECIES	19	ENSGT00940000154242.b	ENSGT00940000156694 #7	ENSGT00390000009040 #8	ENSGT00940000154185.h #9	ENSGT00940000155121.m.a #10	ENSGT00940000159123 #11	ENSGT00390000003289 #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032 #27	ENSGT00390000014654 #28
Monodontidae	ANCESTRAL SPECIES	20	ENSGT00940000154242.b	ENSGT00940000156694 #7	ENSGT00390000009040 #8	ENSGT00940000154185.h #9	ENSGT00940000155121.m.a #10	ENSGT00940000159123 #11	ENSGT00390000003289 #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032 #27	ENSGT00390000014654 #28
Narwhal	MODERN SPECIES	300	SOX17 (ENSMMNG00015015308) #7	MRPL15 (ENSMMNG00015015322) #8	LYPLA1 (ENSMMNG00015015363) #9	ENSMMNG00015015524 #10	RGS20 (ENSMMNG00015015612) #11	ATP6V1H (ENSMMNG00015015669) #12	OPRK1 (ENSMMNG00015015726) #13	NPBWR1 (ENSMMNG00015015745) #14	RB1CC1 (ENSMMNG00015015771) #15	ALKAL1 (ENSMMNG00015015819) #16	ST18 (ENSMMNG00015015870) #17	PCMTD1 (ENSMMNG00015015912) #18	ENSMMNG00015015939 #19	SNTG1 (ENSMMNG00015016248) #20	PPDPFL (ENSMMNG00015017304) #21	SNAI2 (ENSMMNG00015017362) #22	CLXN (ENSMMNG00015017393) #23	ENSMMNG00015017447 #24	MCM4 (ENSMMNG00015017615) #25	PRKDC (ENSMMNG00015018377) #26	CEBPD (ENSMMNG00015019866) #27	SPIDR (ENSMMNG00015019877) #28
Beluga whale	MODERN SPECIES	47	TPRKB (ENSDLEG00000015177)	MRPL15 (ENSDLEG00000015181) #8	ENSDLEG00000015196 ##9	ENSDLEG00000015212 #9	ENSDLEG00000015221 ##10	ENSDLEG00000015228 ##10	RGS20 (ENSDLEG00000015243) #11	ATP6V1H (ENSDLEG00000015265) #12	OPRK1 (ENSDLEG00000015294) #13	NPBWR1 (ENSDLEG00000015304) #14	RB1CC1 (ENSDLEG00000015318) #15	ST18 (ENSDLEG00000015349) #17	PCMTD1 (ENSDLEG00000015382) #18	ENSDLEG00000015408 #19	SNTG1 (ENSDLEG00000015417) #20	SNAI2 (ENSDLEG00000015475) #22	EFCAB1 (ENSDLEG00000015484) #23	UBE2V2 (ENSDLEG00000015496) #24	MCM4 (ENSDLEG00000015514) #25	PRKDC (ENSDLEG00000016005) #26	CEBPD (ENSDLEG00000020408) #27	SPIDR (ENSDLEG00000020423) #28
Vaquita	MODERN SPECIES	8	SOX17 (ENSPSNG00000011510) #7	MRPL15 (ENSPSNG00000011469) #8	ENSPSNG00000011338 #9	ENSPSNG00000011078 #10	RGS20 (ENSPSNG00000010954) #11	ATP6V1H (ENSPSNG00000010849) #12	OPRK1 (ENSPSNG00000010750) #13	NPBWR1 (ENSPSNG00000020139) #14	RB1CC1 (ENSPSNG00000020100) #15	ALKAL1 (ENSPSNG00000020029) #16	ST18 (ENSPSNG00000019900) #17	PCMTD1 (ENSPSNG00000019835) #18	ENSPSNG00000019801 #19	SNTG1 (ENSPSNG00000018422) #20	PPDPFL (ENSPSNG00000018058) #21	SNAI2 (ENSPSNG00000018025) #22	CLXN (ENSPSNG00000017935) #23	ENSPSNG00000017756 #24	MCM4 (ENSPSNG00000017171) #25	PRKDC (ENSPSNG00000016032) #26	CEBPD (ENSPSNG00000015718) #27	SPIDR (ENSPSNG00000015635) #28
Sperm whale	MODERN SPECIES	6	SOX17 (ENSPCTG00005007395) #7	ENSPCTG00005007411	MRPL15 (ENSPCTG00005007420) #8	LYPLA1 (ENSPCTG00005007458) #9	TCEA1 (ENSPCTG00005007517) ##10	RGS20 (ENSPCTG00005007671) #11	ATP6V1H (ENSPCTG00005007732) #12	OPRK1 (ENSPCTG00005007828) #13	NPBWR1 (ENSPCTG00005007847) #14	RB1CC1 (ENSPCTG00005007860) #15	ALKAL1 (ENSPCTG00005007890) #16	ST18 (ENSPCTG00005007942) #17	PCMTD1 (ENSPCTG00005008026) #18	SNTG1 (ENSPCTG00005008190) #20	PPDPFL (ENSPCTG00005011221) #21	SNAI2 (ENSPCTG00005011333) #22	EFCAB1 (ENSPCTG00005011370) #23	UBE2V2 (ENSPCTG00005011488) ##24	MCM4 (ENSPCTG00005011558) #25	PRKDC (ENSPCTG00005012331) #26	CEBPD (ENSPCTG00005017828) #27	ENSPCTG00005017855 #28
Blue whale	MODERN SPECIES	8	SOX17 (ENSBMSG00010015701) #7	MRPL15 (ENSBMSG00010015731) #8	LYPLA1 (ENSBMSG00010015788) #9	TCEA1 (ENSBMSG00010015953) #10	RGS20 (ENSBMSG00010016086) #11	ATP6V1H (ENSBMSG00010016209) #12	OPRK1 (ENSBMSG00010016297) #13	ENSBMSG00010016334	NPBWR1 (ENSBMSG00010016365) #14	RB1CC1 (ENSBMSG00010016414) #15	ALKAL1 (ENSBMSG00010016599) #16	ST18 (ENSBMSG00010016711) #17	PCMTD1 (ENSBMSG00010016806) #18	SNTG1 (ENSBMSG00010017144) #20	PPDPFL (ENSBMSG00010020986) #21	SNAI2 (ENSBMSG00010021014) #22	CLXN (ENSBMSG00010021037) #23	UBE2V2 (ENSBMSG00010021065) ##24	MCM4 (ENSBMSG00010021185) #25	PRKDC (ENSBMSG00010021768) #26	CEBPD (ENSBMSG00010022251) #27	ENSBMSG00010022252	ENSBMSG00010022256 #28
Pecora	ANCESTRAL SPECIES	20	ENSGT00940000154242.b	ENSGT00940000156694 #7	ENSGT00390000009040.a #8	ENSGT00940000154185 #9	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a.g.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00390000014654 #28	ENSGT00940000163032 #27	ENSGT01030000235502	ENSGT00940000162302	ENSGT00940000165552	ENSGT00390000010337.B.a.b	ENSGT00950000182893.a.a.a.b	ENSGT00530000063156.b	ENSGT00940000153859.b	ENSGT00940000160768	ENSGT00390000011435
Yarkand deer	MODERN SPECIES	13	ENSCHYG00000022967 #10	RGS20 (ENSCHYG00000022852) #11	ATP6V1H (ENSCHYG00000022766) #12	OPRK1 (ENSCHYG00000022698) #13	NPBWR1 (ENSCHYG00000022686) #14	RB1CC1 (ENSCHYG00000022542) #15	ALKAL1 (ENSCHYG00000022488) #16	ENSCHYG00000022445	ENSCHYG00000022400	ST18 (ENSCHYG00000021991) #17	PCMTD1 (ENSCHYG00000021921) #18	ENSCHYG00000021851	SNTG1 (ENSCHYG00000020644) #20	ENSCHYG00000020498	PPDPFL (ENSCHYG00000020457) #21	SNAI2 (ENSCHYG00000020385) #22	CLXN (ENSCHYG00000020174) #23	UBE2V2 (ENSCHYG00000020085) ##24	MCM4 (ENSCHYG00000019115) #25	PRKDC (ENSCHYG00000016168) #26	ENSCHYG00000015631	ENSCHYG00000015611	SPIDR (ENSCHYG00000015121) #28	CEBPD (ENSCHYG00000015055) #27	ENSCHYG00000015002	ENSCHYG00000014945	ENSCHYG00000014858	ENSCHYG00000014834	ENSCHYG00000014796	ENSCHYG00000014767	ENSCHYG00000014650
Percora_a	ANCESTRAL SPECIES	23	ENSGT00940000154242.b	ENSGT00940000156694 #7	ENSGT00390000009040.a #8	ENSGT00940000154185.f #9	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a.g.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00390000014654 #28	ENSGT00940000163032 #27	ENSGT01030000235502	ENSGT00940000162302	ENSGT00940000165552	ENSGT00390000010337.B.a.b	ENSGT00950000182893.a.a.a.b	ENSGT00530000063156.b	ENSGT00940000153859.b	ENSGT00940000160768	ENSGT00390000011435
Siberian musk deer	MODERN SPECIES	127																SNAI2 (ENSMMSG00000001745) #22	CLXN (ENSMMSG00000001763) #23	UBE2V2 (ENSMMSG00000001792) ##24	MCM4 (ENSMMSG00000001854) #25	PRKDC (ENSMMSG00000002095) #26	ENSMMSG00000002200	SPIDR (ENSMMSG00000002218) #28	ENSMMSG00000002289	CEBPD (ENSMMSG00000002300) #27
Bovidae	ANCESTRAL SPECIES	22	ENSGT00940000156694 #7	ENSGT00390000009040.a #8	ENSGT00940000154185.f #9	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00390000007918.g.b	ENSGT00940000159905 #17	ENSGT00950000183032.A.a.g.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00390000014654 #28	ENSGT00940000163032 #27	ENSGT01030000235502	ENSGT00940000162302	ENSGT00940000165552	ENSGT00390000010337.B.a.b	ENSGT00950000182893.a.a.a.b	ENSGT00530000063156.b	ENSGT00940000153859.b	ENSGT00940000160768	ENSGT00390000011435
Caprinae	ANCESTRAL SPECIES	18	ENSGT00940000156694 #7	ENSGT00390000009040.a #8	ENSGT00940000154185.f #9	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00390000007918.g.b	ENSGT00940000159905 #17	ENSGT00950000183032.A.a.g.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT01100000263504.a.a.yb	ENSGT00390000014654 #28	ENSGT00940000163032 #27	ENSGT01030000235502	ENSGT00940000162302	ENSGT00390000010337.B.a.b.k.b	ENSGT00950000182893.a.a.a.b	ENSGT00530000063156.b	ENSGT00940000153859.b	ENSGT00940000160768	ENSGT00390000011435
Goat	MODERN SPECIES	5	ENSCHIG00000000811 #8	ENSCHIG00000009109 #9	ENSCHIG00000022556 #10	RGS20 (ENSCHIG00000006425) #11	ATP6V1H (ENSCHIG00000016415) #12	OPRK1 (ENSCHIG00000023230) #13	NPBWR1 (ENSCHIG00000010898) #14	RB1CC1 (ENSCHIG00000017614) #15	ENSCHIG00000027047 #16	ENSCHIG00000015420	ST18 (ENSCHIG00000013632) #17	ENSCHIG00000024195 #18	ENSCHIG00000011128 ##18	SNTG1 (ENSCHIG00000023177) #20	PPDPFL (ENSCHIG00000017544) #21	SNAI2 (ENSCHIG00000024410) #22	CLXN (ENSCHIG00000017174) #23	ENSCHIG00000013718 #24	MCM4 (ENSCHIG00000018094) #25	PRKDC (ENSCHIG00000013822) #26	ENSCHIG00000011570	SPIDR (ENSCHIG00000018290) #28	CEBPD (ENSCHIG00000010420) #27	ENSCHIG00000011893	ENSCHIG00000026116	ENSCHIG00000006578	ENSCHIG00000011424	ENSCHIG00000023961	ZHX2 (ENSCHIG00000019817)	DERL1 (ENSCHIG00000018920)	TBC1D31 (ENSCHIG00000012277)
Rambouillet Sheep	MODERN SPECIES	25	SOX17 (ENSOARG00020025457) #7	MRPL15 (ENSOARG00020025448) #8	LYPLA1 (ENSOARG00020025402) #9	TCEA1 (ENSOARG00020025361) #10	RGS20 (ENSOARG00020025341) #11	ATP6V1H (ENSOARG00020025312) #12	OPRK1 (ENSOARG00020025297) #13	NPBWR1 (ENSOARG00020025293) #14	RB1CC1 (ENSOARG00020025223) #15	ALKAL1 (ENSOARG00020025195) #16	ENSOARG00020025180	ST18 (ENSOARG00020025124) #17	PCMTD1 (ENSOARG00020025108) #18	SNTG1 (ENSOARG00020024728) #20	PPDPFL (ENSOARG00020024587) #21	SNAI2 (ENSOARG00020024572) #22	CLXN (ENSOARG00020024519) #23	MCM4 (ENSOARG00020024419) #25	PRKDC (ENSOARG00020010704) #26	ENSOARG00020009951	CEBPD (ENSOARG00020009877) #27	ENSOARG00020016702	ENSOARG00020016522	HAS2 (ENSOARG00020016454)	ENSOARG00020016416	ZHX2 (ENSOARG00020016397)	DERL1 (ENSOARG00020016190)	TBC1D31 (ENSOARG00020015866)	ENSOARG00020015775	C9H8orf76 (ENSOARG00020015718)	ZHX1 (ENSOARG00020015701)
Bovinae	ANCESTRAL SPECIES	18	ENSGT00940000154185.f.a #9	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000010130.f	ENSGT00390000003289.g.a #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00390000002144.i.b	ENSGT00390000007918.g.b	ENSGT00940000159905 #17	ENSGT00950000183032.A.a.g.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT01100000263504.a.a.yb.fb.b	ENSGT00390000014654 #28	ENSGT00940000163032 #27	ENSGT00940000162302	ENSGT00940000165552	ENSGT00390000010337.B.a.b	ENSGT00950000182893.a.a.a.b	ENSGT00530000063156.b	ENSGT00940000153859.b	ENSGT00940000160768	ENSGT00390000011435
American bison	MODERN SPECIES	3036	ENSBBBG00000008932 #9	TCEA1 (ENSBBBG00000004377) #10	RGS20 (ENSBBBG00000017756) #11	ENSBBBG00000006782	ENSBBBG00000004389 #12	OPRK1 (ENSBBBG00000017852) #13	NPBWR1 (ENSBBBG00000017860) #14	RB1CC1 (ENSBBBG00000017917) #15	ALKAL1 (ENSBBBG00000004408) #16	ENSBBBG00000017946	ENSBBBG00000004417	ST18 (ENSBBBG00000017983) #17	ENSBBBG00000004427 #18	SNTG1 (ENSBBBG00000018671) #20	PPDPFL (ENSBBBG00000018734) #21	SNAI2 (ENSBBBG00000018743) #22	CLXN (ENSBBBG00000018768) #23	UBE2V2 (ENSBBBG00000018781) ##24	MCM4 (ENSBBBG00000018801) #25	PRKDC (ENSBBBG00000004878) #26	ENSBBBG00000019084	SPIDR (ENSBBBG00000019113) #28	ENSBBBG00000019149	ENSBBBG00000019155	ENSBBBG00000004933	ENSBBBG00000019172	ZHX2 (ENSBBBG00000008388)	DERL1 (ENSBBBG00000019213)	TBC1D31 (ENSBBBG00000019387)	FAM83A (ENSBBBG00000019415)	C8orf76 (ENSBBBG00000019423)
Bos	ANCESTRAL SPECIES	21	ENSGT00940000154185.f.a #9	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000010130.f	ENSGT00390000003289.g.a #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00390000002144.i.b	ENSGT00390000007918.g.b	ENSGT00940000159905 #17	ENSGT00950000183032.A.a.g.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT01100000263504.a.a.yb.fb.b	ENSGT00390000014654 #28	ENSGT00940000163032 #27	ENSGT00940000162302	ENSGT00940000165552	ENSGT00390000010337.B.a.b.h	ENSGT00950000182893.a.a.a.b	ENSGT00530000063156.b	ENSGT00940000153859.b	ENSGT00940000160768	ENSGT00390000011435
Bos_a	ANCESTRAL SPECIES	92	ENSGT00390000009040.a #8	ENSGT00940000154185.f.a #9	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000010130.f	ENSGT00390000003289.g.a #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00390000002144.i.b	ENSGT00390000007918.g.b	ENSGT00940000159905 #17	ENSGT00950000183032.A.a.g.a #18	ENSGT00950000182863.B.a #20	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT01100000263504.a.a.yb.fb.b	ENSGT00390000014654 #28	ENSGT00940000162302	ENSGT00940000165552	ENSGT00390000010337.B.a.b.h
Wild yak	MODERN SPECIES	452	TCEA1 (ENSBMUG00000013369) #10	RGS20 (ENSBMUG00000013345) #11	ENSBMUG00000013322	ATP6V1H (ENSBMUG00000013251) #12	OPRK1 (ENSBMUG00000013163) #13	NPBWR1 (ENSBMUG00000013137) #14	RB1CC1 (ENSBMUG00000013120) #15	ENSBMUG00000013083 #16	ENSBMUG00000013069	ENSBMUG00000013053	ST18 (ENSBMUG00000013031) #17	PCMTD1 (ENSBMUG00000012986) #18	ENSBMUG00000012936	SNTG1 (ENSBMUG00000011959) #20	ENSBMUG00000011359	SNAI2 (ENSBMUG00000011335) #22	CLXN (ENSBMUG00000011311) #23	UBE2V2 (ENSBMUG00000011242) ##24	MCM4 (ENSBMUG00000011227) #25	PRKDC (ENSBMUG00000011197) #26	ENSBMUG00000010962	SPIDR (ENSBMUG00000010938) #28	ENSBMUG00000010902	ENSBMUG00000010886	ENSBMUG00000010853	ENSBMUG00000010840	ENSBMUG00000010821	ENSBMUG00000010772
Bos_b	ANCESTRAL SPECIES	25	ENSGT00390000009040.a #8	ENSGT00940000154185.f.a #9	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000010130.f	ENSGT00390000003289.g.a #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00390000007918.g.b	ENSGT00940000159905 #17	ENSGT00950000183032.A.a.g.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT01100000263504.a.a.yb.fb.b	ENSGT00390000014654 #28	ENSGT00940000163032 #27	ENSGT00960000186612.B.a.a.d	ENSGT00940000162302	ENSGT00940000165552	ENSGT00390000010337.B.a.b.h	ENSGT00950000182893.a.a.a.b	ENSGT00530000063156.b	ENSGT00940000153859.b	ENSGT00940000160768
Cow	MODERN SPECIES	5	MRPL15 (ENSBTAG00000001174) #8	LYPLA1 (ENSBTAG00000004243) #9	TCEA1 (ENSBTAG00000003460) #10	RGS20 (ENSBTAG00000003454) #11	ENSBTAG00000054835	ATP6V1H (ENSBTAG00000003450) #12	OPRK1 (ENSBTAG00000000914) #13	NPBWR1 (ENSBTAG00000016159) #14	RB1CC1 (ENSBTAG00000000878) #15	ENSBTAG00000048814	ST18 (ENSBTAG00000005560) #17	PCMTD1 (ENSBTAG00000017492) #18	SNTG1 (ENSBTAG00000002448) #20	ENSBTAG00000027760	PPDPFL (ENSBTAG00000038286) #21	SNAI2 (ENSBTAG00000013227) #22	CLXN (ENSBTAG00000008693) #23	UBE2V2 (ENSBTAG00000023218) ##24	MCM4 (ENSBTAG00000017021) #25	PRKDC (ENSBTAG00000017019) #26	H3-5 (ENSBTAG00000017016)	SPIDR (ENSBTAG00000044106) #28	CEBPD (ENSBTAG00000046307) #27	ENSBTAG00000040351	ENSBTAG00000054983	ENSBTAG00000009474	HAS2 (ENSBTAG00000019892)	ZHX2 (ENSBTAG00000026309)	DERL1 (ENSBTAG00000020693)	TBC1D31 (ENSBTAG00000021156)	FAM83A (ENSBTAG00000005877)
Hybrid Bos Indicus	MODERN SPECIES	5	ENSBIXG00005004122 #12	ENSBIXG00005024120	OPRK1 (ENSBIXG00005024194) #13	NPBWR1 (ENSBIXG00005024209) #14	RB1CC1 (ENSBIXG00005024270) #15	ALKAL1 (ENSBIXG00005024331) #16	ENSBIXG00005024381	ST18 (ENSBIXG00005024438) #17	ENSBIXG00005004177	ENSBIXG00005024471	PCMTD1 (ENSBIXG00005004184) #18	ENSBIXG00005004193	SNTG1 (ENSBIXG00005024969) #20	ENSBIXG00005025067	ENSBIXG00005025099 #21	SNAI2 (ENSBIXG00005025145) #22	CLXN (ENSBIXG00005025221) #23	ENSBIXG00005025298 #24	MCM4 (ENSBIXG00005025814) #25	PRKDC (ENSBIXG00005026568) #26	ENSBIXG00005026643	SPIDR (ENSBIXG00005004566) #28	CEBPD (ENSBIXG00005026750) #27	ENSBIXG00005026755	ENSBIXG00005026768	ENSBIXG00005026793	ENSBIXG00005026808	ENSBIXG00005006616	ZHX2 (ENSBIXG00005004591)	DERL1 (ENSBIXG00005026942)	TBC1D31 (ENSBIXG00005027049)
Camelidae	ANCESTRAL SPECIES	77	ENSGT01070000253766.A.b	ENSGT00940000154242.b	ENSGT00940000156694 #7	ENSGT00390000009040 #8	ENSGT00940000154185 #9	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26
Arabian camel	MODERN SPECIES	21	TMEM68 (ENSCDRG00005020157)	ENSCDRG00005020056	SOX17 (ENSCDRG00005020040) #7	MRPL15 (ENSCDRG00005020012) #8	LYPLA1 (ENSCDRG00005019997) #9	TCEA1 (ENSCDRG00005019946) #10	ENSCDRG00005019928 #11	ATP6V1H (ENSCDRG00005019870) #12	OPRK1 (ENSCDRG00005019845) #13	NPBWR1 (ENSCDRG00005019836) #14	ALKAL1 (ENSCDRG00005019754) #16	ST18 (ENSCDRG00005019658) #17	PCMTD1 (ENSCDRG00005019634) #18	ENSCDRG00005019605 #20	ENSCDRG00005019593	SNAI2 (ENSCDRG00005019580) #22	CLXN (ENSCDRG00005019552) #23	UBE2V2 (ENSCDRG00005019522) ##24	MCM4 (ENSCDRG00005019348) #25	PRKDC (ENSCDRG00005009363) #26	ENSCDRG00005008972
Suina	ANCESTRAL SPECIES	26	ENSGT01070000253766.A.b	ENSGT00940000154242.b	ENSGT00940000156694 #7	ENSGT00390000009040 #8	ENSGT00940000154185 #9	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #12	ENSGT00940000157341 #13	ENSGT00940000161936 #14	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032 #27	ENSGT00390000014654 #28
Pig	MODERN SPECIES	12	RP1 (ENSSSCG00000042752)	SOX17 (ENSSSCG00000060730) #7	MRPL15 (ENSSSCG00000030578) #8	LYPLA1 (ENSSSCG00000006260) #9	TCEA1 (ENSSSCG00000006261) #10	RGS20 (ENSSSCG00000006262) #11	ATP6V1H (ENSSSCG00000006263) #12	OPRK1 (ENSSSCG00000006264) #13	NPBWR1 (ENSSSCG00000059721) #14	RB1CC1 (ENSSSCG00000028902) #15	ALKAL1 (ENSSSCG00000033922) #16	ST18 (ENSSSCG00000006266) #17	PCMTD1 (ENSSSCG00000006267) #18	SNTG1 (ENSSSCG00000034495) #20	ENSSSCG00000045207	SNAI2 (ENSSSCG00000039568) #22	CLXN (ENSSSCG00000032887) #23	UBE2V2 (ENSSSCG00000022190) #24	MCM4 (ENSSSCG00000006273) #25	PRKDC (ENSSSCG00000006274) #26	CEBPD (ENSSSCG00000032367) #27	SPIDR (ENSSSCG00000006277) #28	PRRX1 (ENSSSCG00000031503)	GORAB (ENSSSCG00000006280)	NTMT2 (ENSSSCG00000006281)	KIFAP3 (ENSSSCG00000006282)	SCYL3 (ENSSSCG00000006283)	C1orf112 (ENSSSCG00000006284)	METTL18 (ENSSSCG00000006285)	ENSSSCG00000031622	ENSSSCG00000030960
Chacoan peccary	MODERN SPECIES	840	XKR4 (ENSCWAG00000008058)	RP1 (ENSCWAG00000007943)	SOX17 (ENSCWAG00000016827) #7	MRPL15 (ENSCWAG00000016794) #8	LYPLA1 (ENSCWAG00000016699) #9	TCEA1 (ENSCWAG00000016391) #10	RGS20 (ENSCWAG00000016261) #11	ATP6V1H (ENSCWAG00000016149) #12	OPRK1 (ENSCWAG00000016074) #13	NPBWR1 (ENSCWAG00000016059) #14	RB1CC1 (ENSCWAG00000016009) #15	ALKAL1 (ENSCWAG00000015933) #16	ST18 (ENSCWAG00000015832) #17	PCMTD1 (ENSCWAG00000015794) #18	SNTG1 (ENSCWAG00000009208) #20	SNAI2 (ENSCWAG00000008909) #22	CLXN (ENSCWAG00000008778) #23