Myomorpha	ANCESTRAL SPECIES	74																ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b.d	ENSGT01050000244824.A #24	ENSGT00940000155633.D #25	ENSGT00940000163032	ENSGT00390000014654 #27
Muroidea	ANCESTRAL SPECIES	94																ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b.d	ENSGT01050000244824.A #24	ENSGT00940000155633.D #25	ENSGT00940000163032	ENSGT00390000014654 #27
Muroidea_A	ANCESTRAL SPECIES	17																ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b.d	ENSGT01050000244824.A #24	ENSGT00940000155633.D #25	ENSGT00940000163032	ENSGT00390000014654 #27	ENSGT00940000158677 #28	ENSGT00390000013709.b #29	ENSGT00940000155504 #30	ENSGT00940000155765 #31	ENSGT00390000014845 #26	ENSGT00900000141099.c #33	ENSGT00940000164874 #34	ENSGT00940000161017 #36	ENSGT00940000156516 #37
Murinae	ANCESTRAL SPECIES	13																ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a	ENSGT01050000244824.A #24	ENSGT00940000155633.D #25	ENSGT00390000014845 #26	ENSGT00940000163032	ENSGT00390000014654 #27	ENSGT00940000158677 #28	ENSGT00390000013709.b #29	ENSGT00940000155504 #30	ENSGT00940000155765 #31	ENSGT00900000141099.c #33	ENSGT00940000164874 #34	ENSGT00940000161017 #36	ENSGT00940000156516 #37
Mus	ANCESTRAL SPECIES	13	ENSGT00390000005386	ENSGT00940000157803 #7	ENSGT00940000162720.a.a	ENSGT00390000001488 #8	ENSGT00390000016730 #9	ENSGT00390000009628 #10	ENSGT00730000111088 #11	ENSGT00950000182857.a.a.b.a.r.b.a.a.d #13	ENSGT00440000038745.b #14	ENSGT00390000002393 #15	ENSGT00390000000111.b.b #16	ENSGT00940000155421.b #17	ENSGT00390000007773 #18	ENSGT00940000160271 #19	ENSGT00940000161777.a.b #20	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a	ENSGT01050000244824.A #24	ENSGT00940000155633.D #25	ENSGT00390000014845 #26	ENSGT00940000163032	ENSGT00390000014654 #27	ENSGT00940000158677 #28	ENSGT00390000013709.b #29	ENSGT00940000155504 #30	ENSGT00940000155765 #31	ENSGT00940000153523.a #32	ENSGT00900000141099.c #33	ENSGT00940000164874 #34	ENSGT00940000161017.h #35
Mus_A	ANCESTRAL SPECIES	18	ENSGT00940000157803 #7	ENSGT00940000162720.a.a	ENSGT00390000001488 #8	ENSGT00390000016730 #9	ENSGT00390000009628 #10	ENSGT00730000111088 #11	ENSGT00950000182857.a.a.b.a.r.b.a.a.d #13	ENSGT00440000038745.b #14	ENSGT00390000002393 #15	ENSGT00390000000111.b.b #16	ENSGT00940000155421.b #17	ENSGT00390000007773 #18	ENSGT00940000160271 #19	ENSGT00940000161777.a.b #20	ENSGT00940000168647 #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a	ENSGT01050000244824.A #24	ENSGT00940000155633.D #25	ENSGT00390000014845 #26	ENSGT00940000163032	ENSGT00390000014654 #27	ENSGT00940000158677 #28	ENSGT00390000013709.b #29	ENSGT00940000155504 #30	ENSGT00940000155765 #31	ENSGT00940000153523.a #32	ENSGT00900000141099.c #33	ENSGT00940000164874 #34	ENSGT00940000161017.h #35
Mus_B	ANCESTRAL SPECIES	18	ENSGT00940000157803 #7	ENSGT00940000162720.a.a	ENSGT00390000001488 #8	ENSGT00390000016730 #9	ENSGT00390000009628 #10	ENSGT00730000111088 #11	ENSGT00950000182857.a.a.b.a.r.b.a.a.d #13	ENSGT00440000038745.b #14	ENSGT00390000002393 #15	ENSGT00390000000111.b.b #16	ENSGT00940000155421.b #17	ENSGT00390000007773 #18	ENSGT00940000160271 #19	ENSGT00940000161777.a.b #20	ENSGT00940000168647 #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a	ENSGT01050000244824.A #24	ENSGT00940000155633.D #25	ENSGT00390000014845 #26	ENSGT00940000163032	ENSGT00390000014654 #27	ENSGT00940000158677 #28	ENSGT00390000013709.b #29	ENSGT00940000155504 #30	ENSGT00940000155765 #31	ENSGT00940000153523.a #32	ENSGT00900000141099.c #33	ENSGT00940000164874 #34	ENSGT00940000161017.h #35
Mus_C	ANCESTRAL SPECIES	12	ENSGT00390000005386	ENSGT00940000157803 #7	ENSGT00390000001488 #8	ENSGT00390000016730 #9	ENSGT00390000009628 #10	ENSGT00730000111088 #11	ENSGT00950000182857.a.a.b.a.r.b.a.a.d #13	ENSGT00440000038745.b #14	ENSGT00390000002393 #15	ENSGT00390000000111.b.b #16	ENSGT00940000155421.b #17	ENSGT00390000007773 #18	ENSGT00940000160271 #19	ENSGT00940000161777.a.b #20	ENSGT00940000168647 #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a	ENSGT01050000244824.A #24	ENSGT00940000155633.D #25	ENSGT00390000014845 #26	ENSGT00940000163032	ENSGT00390000014654 #27	ENSGT00940000158677 #28	ENSGT00390000013709.b #29	ENSGT00940000155504 #30	ENSGT00940000155765 #31	ENSGT00940000153523.a #32	ENSGT00900000141099.c #33	ENSGT00940000164874 #34	ENSGT00940000161017.h #35
spretus	MODERN SPECIES	7	Pla2g10 (MGP_SPRETEiJ_G0021364) #7	Rrn3 (MGP_SPRETEiJ_G0021365) #8	Ntan1 (MGP_SPRETEiJ_G0021366) #9	Pdxdc1 (MGP_SPRETEiJ_G0021367) #10	Mpv17l (MGP_SPRETEiJ_G0021368) #11	MGP_SPRETEiJ_G0021369 #12	MGP_SPRETEiJ_G0021370 #13	Bmerb1 (MGP_SPRETEiJ_G0021371) #14	Marf1 (MGP_SPRETEiJ_G0021372) #15	Nde1 (MGP_SPRETEiJ_G0021373) #16	Myh11 (MGP_SPRETEiJ_G0021374) #17	Cep20 (MGP_SPRETEiJ_G0021375) #18	Abcc1 (MGP_SPRETEiJ_G0021376) #19	MGP_SPRETEiJ_G0021377 #20	MGP_SPRETEiJ_G0021378 #21	Snai2 (MGP_SPRETEiJ_G0021379) #22	Efcab1 (MGP_SPRETEiJ_G0021380) #23	Mcm4 (MGP_SPRETEiJ_G0021381) #24	Prkdc (MGP_SPRETEiJ_G0021382) #25	Mzt2 (MGP_SPRETEiJ_G0021383) #26	Spidr (MGP_SPRETEiJ_G0021384) #27	Pkp2 (MGP_SPRETEiJ_G0021385) #28	Yars2 (MGP_SPRETEiJ_G0021386) #29	Dnm1l (MGP_SPRETEiJ_G0021387) #30	Fgd4 (MGP_SPRETEiJ_G0021388) #31	Or7a40 (MGP_SPRETEiJ_G0021389) #32	Spag6l (MGP_SPRETEiJ_G0021390) #33	Igll1 (MGP_SPRETEiJ_G0021391) #34	MGP_SPRETEiJ_G0021392 #35	Vpreb1b (MGP_SPRETEiJ_G0021393) #36	Top3b (MGP_SPRETEiJ_G0021394) #37
Mouse	MODERN SPECIES	7	Parn (ENSMUSG00000022685)	Bfar (ENSMUSG00000022684)	Pla2g10 (ENSMUSG00000022683) #7	A930007A09Rik (ENSMUSG00000118559)	Rrn3 (ENSMUSG00000022682) #8	Ntan1 (ENSMUSG00000022681) #9	Pdxdc1 (ENSMUSG00000022680) #10	Mpv17l (ENSMUSG00000022679) #11	Ifitm7 (ENSMUSG00000065968) #13	Bmerb1 (ENSMUSG00000044117) #14	Marf1 (ENSMUSG00000060657) #15	Nde1 (ENSMUSG00000022678) #16	Myh11 (ENSMUSG00000018830) #17	Cep20 (ENSMUSG00000022677) #18	Abcc1 (ENSMUSG00000023088) #19	Snai2 (ENSMUSG00000022676) #22	Efcab1 (ENSMUSG00000068617) #23	Ube2v2 (ENSMUSG00000022674)	Mcm4 (ENSMUSG00000022673) #24	Prkdc (ENSMUSG00000022672) #25	Mzt2 (ENSMUSG00000022671) #26	Cebpd (ENSMUSG00000071637)	Spidr (ENSMUSG00000041974) #27	Pkp2 (ENSMUSG00000041957) #28	Yars2 (ENSMUSG00000022792) #29	Dnm1l (ENSMUSG00000022789) #30	Fgd4 (ENSMUSG00000022788) #31	Or7a40 (ENSMUSG00000048101) #32	Spag6l (ENSMUSG00000022783) #33	Igll1 (ENSMUSG00000075370) #34	Vpreb1a (ENSMUSG00000059305) ##36
Ryukyu mouse	MODERN SPECIES	7	MGP_CAROLIEiJ_G0020468	Pla2g10 (MGP_CAROLIEiJ_G0020469) #7	Rrn3 (MGP_CAROLIEiJ_G0020470) #8	Ntan1 (MGP_CAROLIEiJ_G0020471) #9	Pdxdc1 (MGP_CAROLIEiJ_G0020472) #10	Mpv17l (MGP_CAROLIEiJ_G0020473) #11	MGP_CAROLIEiJ_G0020474 #13	Bmerb1 (MGP_CAROLIEiJ_G0020475) #14	Marf1 (MGP_CAROLIEiJ_G0020476) #15	Nde1 (MGP_CAROLIEiJ_G0020477) #16	Myh11 (MGP_CAROLIEiJ_G0020478) #17	Cep20 (MGP_CAROLIEiJ_G0020479) #18	Abcc1 (MGP_CAROLIEiJ_G0020480) #19	MGP_CAROLIEiJ_G0020481 #20	MGP_CAROLIEiJ_G0020482 #21	Snai2 (MGP_CAROLIEiJ_G0020483) #22	Efcab1 (MGP_CAROLIEiJ_G0020484) #23	Ube2v2 (MGP_CAROLIEiJ_G0020485)	Mcm4 (MGP_CAROLIEiJ_G0020486) #24	Prkdc (MGP_CAROLIEiJ_G0020487) #25	Mzt2 (MGP_CAROLIEiJ_G0020488) #26	Spidr (MGP_CAROLIEiJ_G0020489) #27	Pkp2 (MGP_CAROLIEiJ_G0020490) #28	Yars2 (MGP_CAROLIEiJ_G0020491) #29	Dnm1l (MGP_CAROLIEiJ_G0020492) #30	Fgd4 (MGP_CAROLIEiJ_G0020493) #31	Or7a40 (MGP_CAROLIEiJ_G0020494) #32	Spag6l (MGP_CAROLIEiJ_G0020495) #33	Igll1 (MGP_CAROLIEiJ_G0020496) #34	MGP_CAROLIEiJ_G0020497 #35	MGP_CAROLIEiJ_G0020498 #35
Shrew mouse	MODERN SPECIES	3	Bfar (MGP_PahariEiJ_G0016173)	MGP_PahariEiJ_G0016174	Pla2g10 (MGP_PahariEiJ_G0016175) #7	Rrn3 (MGP_PahariEiJ_G0016176) #8	Ntan1 (MGP_PahariEiJ_G0016177) #9	Pdxdc1 (MGP_PahariEiJ_G0016178) #10	Mpv17l (MGP_PahariEiJ_G0016179) #11	MGP_PahariEiJ_G0016180 #13	Bmerb1 (MGP_PahariEiJ_G0016181) #14	Marf1 (MGP_PahariEiJ_G0016182) #15	Nde1 (MGP_PahariEiJ_G0016183) #16	Myh11 (MGP_PahariEiJ_G0016184) #17	Cep20 (MGP_PahariEiJ_G0016185) #18	Abcc1 (MGP_PahariEiJ_G0016186) #19	MGP_PahariEiJ_G0016187 #20	Snai2 (MGP_PahariEiJ_G0016188) #22	Efcab1 (MGP_PahariEiJ_G0016189) #23	Ube2v2 (MGP_PahariEiJ_G0016190)	Mcm4 (MGP_PahariEiJ_G0016191) #24	Prkdc (MGP_PahariEiJ_G0016192) #25	Mzt2 (MGP_PahariEiJ_G0016193) #26	Spidr (MGP_PahariEiJ_G0016194) #27	Pkp2 (MGP_PahariEiJ_G0016195) #28	Yars2 (MGP_PahariEiJ_G0016196) #29	Dnm1l (MGP_PahariEiJ_G0016197) #30	Fgd4 (MGP_PahariEiJ_G0016198) #31	Or7a40 (MGP_PahariEiJ_G0016199) #32	Spag6l (MGP_PahariEiJ_G0016200) #33	Igll1 (MGP_PahariEiJ_G0016201) #34	MGP_PahariEiJ_G0016202 #35	MGP_PahariEiJ_G0016203 #36
Cricetidae	ANCESTRAL SPECIES	16																ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b.d	ENSGT01050000244824.A #24	ENSGT00940000155633.D #25	ENSGT00940000163032	ENSGT00390000014654 #27	ENSGT00940000158677 #28	ENSGT00390000013709.b #29	ENSGT00940000155504 #30	ENSGT00940000155765 #31	ENSGT00390000014845 #26	ENSGT00900000141099.c #33	ENSGT00940000164874 #34	ENSGT00940000161017 #36	ENSGT00940000156516 #37
Cricetinae	ANCESTRAL SPECIES	19	ENSGT00390000006068	ENSGT01030000234518.B.b	ENSGT00940000161956	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00940000153505.a.a.c.a.a.a.a.a.a	ENSGT00940000153505.a.a.c.a.a.b	ENSGT00940000153505.a.a.c.a.a.a.b.b	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b.d	ENSGT01050000244824.A #24	ENSGT00940000155633.D #25	ENSGT00940000163032	ENSGT00390000014654 #27	ENSGT00940000158677 #28	ENSGT00390000013709.b #29	ENSGT00940000155504 #30	ENSGT00940000155765 #31	ENSGT00390000014845 #26
Chinese hamster chok1gshd	MODERN SPECIES	130	Cox19 (ENSCGRG00001024529)	Adap1 (ENSCGRG00001006563)	Get4 (ENSCGRG00001014454)	Sun1 (ENSCGRG00001019963)	Dnaaf5 (ENSCGRG00001013336)	Prkar1b (ENSCGRG00001017893)	Pdgfa (ENSCGRG00001019349)	Foxl3 (ENSCGRG00001005158)	Fam20c (ENSCGRG00001009787)	ENSCGRG00001014517	Zfp68 (ENSCGRG00001024349)	ENSCGRG00001011134	ENSCGRG00001017912	ENSCGRG00001018731	Zfp157 (ENSCGRG00001012834)	Snai2 (ENSCGRG00001013674) #22	Efcab1 (ENSCGRG00001015295) #23	ENSCGRG00001014373	Mcm4 (ENSCGRG00001019609) #24	Prkdc (ENSCGRG00001003779) #25	Spidr (ENSCGRG00001017594) #27	Cebpd (ENSCGRG00001010010)	Pkp2 (ENSCGRG00001013847) #28	Yars2 (ENSCGRG00001019281) #29	Dnm1l (ENSCGRG00001021788) #30	Fgd4 (ENSCGRG00001015663) #31	Mzt2 (ENSCGRG00001024758) #26	Or7a40 (ENSCGRG00001005149) #32
Golden Hamster	MODERN SPECIES	712	C130050O18Rik (ENSMAUG00000014842)	Gpr146 (ENSMAUG00000005533)	Cyp2w1 (ENSMAUG00000021456)	Cox19 (ENSMAUG00000019244)	Adap1 (ENSMAUG00000012540)	Get4 (ENSMAUG00000012483)	Sun1 (ENSMAUG00000016426)	Dnaaf5 (ENSMAUG00000021545)	Prkar1b (ENSMAUG00000008747)	Pdgfa (ENSMAUG00000021539)	Foxl3 (ENSMAUG00000009578)	Fam20c (ENSMAUG00000002295)	ENSMAUG00000021089	ENSMAUG00000018743	Zfp157 (ENSMAUG00000005490)	Snai2 (ENSMAUG00000008119) #22	Efcab1 (ENSMAUG00000021514) #23	ENSMAUG00000009463	ENSMAUG00000006891	ENSMAUG00000021693	Mcm4 (ENSMAUG00000018869) #24	Prkdc (ENSMAUG00000013266) #25	Cebpd (ENSMAUG00000010186)	Spidr (ENSMAUG00000013933) #27
Cricetidae_B	ANCESTRAL SPECIES	13																ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b.d	ENSGT01050000244824.A #24	ENSGT00940000155633.D #25	ENSGT00940000163032	ENSGT00390000014654 #27	ENSGT00940000158677 #28	ENSGT00390000013709.b #29	ENSGT00940000155504 #30	ENSGT00940000155765 #31	ENSGT00390000014845 #26	ENSGT00900000141099.c #33	ENSGT00940000164874 #34	ENSGT00940000161017 #36	ENSGT00940000156516 #37
Northern American deer mouse	MODERN SPECIES	3																Snai2 (ENSPEMG00000011739) #22	Efcab1 (ENSPEMG00000010596) #23	ENSPEMG00000013862	Mcm4 (ENSPEMG00000016455) #24	Prkdc (ENSPEMG00000006101) #25	Cebpd (ENSPEMG00000006910)	Spidr (ENSPEMG00000007140) #27	Pkp2 (ENSPEMG00000011549) #28	Yars2 (ENSPEMG00000007655) #29	Dnm1l (ENSPEMG00000000455) #30	Fgd4 (ENSPEMG00000007078) #31	ENSPEMG00000029086	Mzt2 (ENSPEMG00000001020) #26	ENSPEMG00000025802	Or7a40 (ENSPEMG00000000794) #32	Spag6l (ENSPEMG00000026249) #33
Prairie vole	MODERN SPECIES	160																Snai2 (ENSMOCG00000006622) #22	Efcab1 (ENSMOCG00000001248) #23	ENSMOCG00000002368	ENSMOCG00000017342 #24	Prkdc (ENSMOCG00000014871) #25	Cebpd (ENSMOCG00000003699)	Spidr (ENSMOCG00000016918) #27	Pkp2 (ENSMOCG00000001368) #28	Yars2 (ENSMOCG00000011433) #29	Dnm1l (ENSMOCG00000006970) #30	Fgd4 (ENSMOCG00000005834) #31	Mzt2 (ENSMOCG00000014389) #26	ENSMOCG00000015664	ENSMOCG00000010843