Euarchontoglires	ANCESTRAL SPECIES	19	ENSGT00940000156694 #32	ENSGT00390000009040 #31	ENSGT00940000154185 #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00940000164631 #29
Primates	ANCESTRAL SPECIES	20	ENSGT00940000156694 #32	ENSGT00390000009040 #31	ENSGT00940000154185 #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00940000164631 #29
Strepsirrhini	ANCESTRAL SPECIES	15	ENSGT00940000154242.b #33	ENSGT00940000156694 #32	ENSGT00390000009040 #31	ENSGT00940000154185 #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b #24	ENSGT00740000115534.a.b.f.b ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00940000164631 #29
Lemuriformes	ANCESTRAL SPECIES	24	ENSGT00940000154242.b #33	ENSGT00940000156694 #32	ENSGT00390000009040 #31	ENSGT00940000154185 #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00940000164631 #29
Lemuriformes_a	ANCESTRAL SPECIES	107					ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00940000164631 #29	ENSGT00940000154185 #30	ENSGT00390000009040 #31	ENSGT00940000156694 #32	ENSGT00940000154242.b #33	ENSGT01070000253766.A.b #34	ENSGT00390000011782 #35	ENSGT00390000018056 #36	ENSGT00940000158011 #37
Coquerels sifaka	MODERN SPECIES	853				TCEA1 (ENSPCOG00000021601) #10	RGS20 (ENSPCOG00000021873) #11	ENSPCOG00000021440 #12	ATP6V1H (ENSPCOG00000013848) #13	OPRK1 (ENSPCOG00000015547) #14	RB1CC1 (ENSPCOG00000013427) #15	ALKAL1 (ENSPCOG00000023221) #16	ST18 (ENSPCOG00000007929) #17	PCMTD1 (ENSPCOG00000021881) #18	ENSPCOG00000008759 #19	SNTG1 (ENSPCOG00000021495) #20	PPDPFL (ENSPCOG00000009682) #21	SNAI2 (ENSPCOG00000015656) #22	CLXN (ENSPCOG00000013982) #23	ENSPCOG00000025231 #24	MCM4 (ENSPCOG00000014586) #25	PRKDC (ENSPCOG00000014140) #26	ENSPCOG00000024411 #27	ENSPCOG00000024613 #28	ENSPCOG00000025760 #29	LYPLA1 (ENSPCOG00000021102) #30	MRPL15 (ENSPCOG00000027252) #31	SOX17 (ENSPCOG00000015523) #32	ENSPCOG00000014780 #33	XKR4 (ENSPCOG00000013290) #34	TMEM68 (ENSPCOG00000006274) #35	TGS1 (ENSPCOG00000013537) #36	LYN (ENSPCOG00000024655) #37
Haplorrhini	ANCESTRAL SPECIES	19	ENSGT00940000156694 #32	ENSGT00390000009040 #31	ENSGT00940000154185 #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28
Simiiformes	ANCESTRAL SPECIES	20	ENSGT00940000156694 #32	ENSGT00390000009040 #31	ENSGT00940000154185 #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00520000055567.a.a.a.e.b
Catarrhini	ANCESTRAL SPECIES	15	ENSGT00940000154185.l.a.a #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000154351.k.b.a.b.b	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00940000153241.A.l.a	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00520000055567.a.a.a.e.b	ENSGT00940000156298.t	ENSGT00940000154351.k.b.a.b.a	ENSGT00910000147457	ENSGT00390000001491.a	ENSGT00390000004945	ENSGT00550000074935.u	ENSGT00940000158075	ENSGT00390000017123.b
Hominoidea	ANCESTRAL SPECIES	14	ENSGT00940000154185.l.a.b #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000154351.k.b.a.b.b	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00940000153241.A.l.a	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00520000055567.a.a.a.e.b	ENSGT00940000156298.t	ENSGT00940000154351.k.b.a.b.a	ENSGT00910000147457	ENSGT00390000001491.a	ENSGT00390000004945	ENSGT00550000074935.u	ENSGT00940000158075	ENSGT00390000017123.b
Hominidae	ANCESTRAL SPECIES	15	ENSGT00940000154185.l.a.b #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000154351.k.b.a.b.b	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00940000153241.A.l.a	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00520000055567.a.a.a.e.b	ENSGT00940000156298.t	ENSGT00940000154351.k.b.a.b.a	ENSGT00910000147457	ENSGT00390000001491.a	ENSGT00390000004945	ENSGT00550000074935.u	ENSGT00940000158075	ENSGT00390000017123.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	13	ENSGT00940000154185.l.a.b.a #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000154351.k.b.a.b.b	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00940000153241.A.l.a	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00520000055567.a.a.a.e.b	ENSGT00940000156298.t	ENSGT00940000154351.k.b.a.b.a	ENSGT00390000015738	ENSGT00390000001994.v	ENSGT00940000164614	ENSGT00910000147457	ENSGT00390000001491.a	ENSGT00390000004945
Homo/Pan group	ANCESTRAL SPECIES	12	ENSGT00940000154185.l.a.a #30	ENSGT00940000154185.l.a.b.a #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00940000153241.A.l.a	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00520000055567.a.a.a.e.b	ENSGT00940000156298.t	ENSGT00940000154351.k.b.a.b.a	ENSGT00390000015738.b	ENSGT00390000001994.v	ENSGT00940000164614	ENSGT00910000147457	ENSGT00390000001491.a	ENSGT00390000004945
Pan	ANCESTRAL SPECIES	11	ENSGT00940000154185.l.a.b.a #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00390000009405.b.d	ENSGT00950000182863.B.a #20	ENSGT00940000153241.A.l.a	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00910000148642	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00520000055567.a.a.a.e.b	ENSGT00940000156298.t	ENSGT00940000154351.k.b.a.b.a	ENSGT00390000015738.b	ENSGT00390000001994.v	ENSGT00940000164614	ENSGT00910000147457	ENSGT00390000001491.a
Chimpanzee	MODERN SPECIES	21	RGS20 (ENSPTRG00000020250) #11	ATP6V1H (ENSPTRG00000020249) #13	ENSPTRG00000051579	OPRK1 (ENSPTRG00000038846) #14	NPBWR1 (ENSPTRG00000031000)	RB1CC1 (ENSPTRG00000020246) #15	ALKAL1 (ENSPTRG00000024172) #16	ST18 (ENSPTRG00000020245) #17	PCMTD1 (ENSPTRG00000020242) #18	PXDNL (ENSPTRG00000020241)	ENSPTRG00000043204	SNTG1 (ENSPTRG00000020240) #20	ENSPTRG00000048958	ENSPTRG00000041948	PPDPFL (ENSPTRG00000020236) #21	SNAI2 (ENSPTRG00000020235) #22	CLXN (ENSPTRG00000020233) #23	ENSPTRG00000043711	ENSPTRG00000043470	UBE2V2 (ENSPTRG00000048563) ##24	MCM4 (ENSPTRG00000020230) #25	PRKDC (ENSPTRG00000020229) #26	CEBPD (ENSPTRG00000042020)	ENSPTRG00000047946	SPIDR (ENSPTRG00000020227) #28	ENSPTRG00000050490	ENSPTRG00000049036	ENSPTRG00000048350	ENSPTRG00000048846	POTEA (ENSPTRG00000022971)	HGSNAT (ENSPTRG00000020217)
Bonobo	MODERN SPECIES	21	ENSPPAG00000038171 #30	TCEA1 (ENSPPAG00000007248) #10	RGS20 (ENSPPAG00000033679) #11	ATP6V1H (ENSPPAG00000038229) #13	OPRK1 (ENSPPAG00000028202) #14	NPBWR1 (ENSPPAG00000033096)	RB1CC1 (ENSPPAG00000040017) #15	ALKAL1 (ENSPPAG00000040265) #16	ST18 (ENSPPAG00000035808) #17	PCMTD1 (ENSPPAG00000008533) #18	PXDNL (ENSPPAG00000034627)	ENSPPAG00000041697	SNTG1 (ENSPPAG00000038256) #20	ENSPPAG00000041874	PPDPFL (ENSPPAG00000033324) #21	SNAI2 (ENSPPAG00000015662) #22	CLXN (ENSPPAG00000034023) #23	ENSPPAG00000032696	ENSPPAG00000043391 #24	MCM4 (ENSPPAG00000031535) #25	PRKDC (ENSPPAG00000029994) #26	ENSPPAG00000030119	SPIDR (ENSPPAG00000031936) #28	ENSPPAG00000037642	ENSPPAG00000042687	ENSPPAG00000042955	ENSPPAG00000042909	ENSPPAG00000028046	ENSPPAG00000042111	POMK (ENSPPAG00000036365)	FNTA (ENSPPAG00000041427)
Human	MODERN SPECIES	20	SOX17 (ENSG00000164736) #32	MRPL15 (ENSG00000137547) #31	LYPLA1 (ENSG00000120992) #30	TCEA1 (ENSG00000187735) #10	RGS20 (ENSG00000147509) #11	ATP6V1H (ENSG00000047249) #13	OPRK1 (ENSG00000082556) #14	NPBWR1 (ENSG00000288611)	RB1CC1 (ENSG00000023287) #15	ALKAL1 (ENSG00000196711) #16	ST18 (ENSG00000147488) #17	PCMTD1 (ENSG00000168300) #18	PXDNL (ENSG00000147485)	SNTG1 (ENSG00000147481) #20	PPDPFL (ENSG00000168333) #21	SNAI2 (ENSG00000019549) #22	CLXN (ENSG00000034239) #23	UBE2V2 (ENSG00000169139) ##24	MCM4 (ENSG00000104738) #25	PRKDC (ENSG00000253729) #26	CEBPD (ENSG00000221869)	SPIDR (ENSG00000164808) #28	POTEA (ENSG00000188877)	HGSNAT (ENSG00000165102)	POMK (ENSG00000185900)	FNTA (ENSG00000168522)	HOOK3 (ENSG00000168172)	RNF170 (ENSG00000120925)	THAP1 (ENSG00000131931)	CHRNA6 (ENSG00000147434)	CHRNB3 (ENSG00000147432)
Gorilla	MODERN SPECIES	21	ENSGGOG00000028339 #30	TCEA1 (ENSGGOG00000023652) #10	RGS20 (ENSGGOG00000001386) #11	ATP6V1H (ENSGGOG00000000515) #13	ENSGGOG00000043511	OPRK1 (ENSGGOG00000000682) #14	NPBWR1 (ENSGGOG00000015243)	RB1CC1 (ENSGGOG00000028523) #15	ALKAL1 (ENSGGOG00000002382) #16	ST18 (ENSGGOG00000001223) #17	PCMTD1 (ENSGGOG00000025636) #18	PXDNL (ENSGGOG00000014572)	SNTG1 (ENSGGOG00000004595) #20	ENSGGOG00000037165	PPDPFL (ENSGGOG00000005946) #21	SNAI2 (ENSGGOG00000000959) #22	CLXN (ENSGGOG00000015381) #23	UBE2V2 (ENSGGOG00000037904) ##24	MCM4 (ENSGGOG00000006080) #25	PRKDC (ENSGGOG00000006036) #26	CEBPD (ENSGGOG00000008077)	SPIDR (ENSGGOG00000007599) #28	ENSGGOG00000042073	ENSGGOG00000039559	ENSGGOG00000005483	ENSGGOG00000028149	ENSGGOG00000041477	ENSGGOG00000024016	ENSGGOG00000022814	ENSGGOG00000042105	ENSGGOG00000028525
Orangutan	MODERN SPECIES	21	ENSPPYG00000018592	MRPL15 (ENSPPYG00000018591) #31	LYPLA1 (ENSPPYG00000018589) #10	RGS20 (ENSPPYG00000018588) #11	ATP6V1H (ENSPPYG00000018587) #13	OPRK1 (ENSPPYG00000018586) #14	NPBWR1 (ENSPPYG00000018585)	ENSPPYG00000030694	RB1CC1 (ENSPPYG00000018584) #15	ALKAL1 (ENSPPYG00000018583) #16	ST18 (ENSPPYG00000034718) #17	PCMTD1 (ENSPPYG00000041146) #18	PXDNL (ENSPPYG00000018581)	SNTG1 (ENSPPYG00000018580) #20	PPDPFL (ENSPPYG00000018579) #21	SNAI2 (ENSPPYG00000018578) #22	CLXN (ENSPPYG00000018577) #23	UBE2V2 (ENSPPYG00000018575) ##24	MCM4 (ENSPPYG00000018574) #25	PRKDC (ENSPPYG00000018573) #26	CEBPD (ENSPPYG00000018572)	SPIDR (ENSPPYG00000018571) #28	ENSPPYG00000038516	ENSPPYG00000041060	ENSPPYG00000018567	ENSPPYG00000037871	HGSNAT (ENSPPYG00000018565)	POMK (ENSPPYG00000018564)	ENSPPYG00000018562	RNF170 (ENSPPYG00000031898)	THAP1 (ENSPPYG00000034807)
Gibbon	MODERN SPECIES	6	MRPL15 (ENSNLEG00000029566) #31	LYPLA1 (ENSNLEG00000001027) #30	TCEA1 (ENSNLEG00000000981) #10	RGS20 (ENSNLEG00000000956) #11	ATP6V1H (ENSNLEG00000000870) #13	OPRK1 (ENSNLEG00000033253) #14	NPBWR1 (ENSNLEG00000018388)	RB1CC1 (ENSNLEG00000000777) #15	ALKAL1 (ENSNLEG00000000759) #16	ST18 (ENSNLEG00000000678) #17	PCMTD1 (ENSNLEG00000000661) #18	PXDNL (ENSNLEG00000000611)	SNTG1 (ENSNLEG00000000578) #20	ENSNLEG00000029558	PPDPFL (ENSNLEG00000028865) #21	SNAI2 (ENSNLEG00000013421) #22	CLXN (ENSNLEG00000013405) #23	ENSNLEG00000019352	ENSNLEG00000036004 #24	MCM4 (ENSNLEG00000013314) #25	PRKDC (ENSNLEG00000013252) #26	ENSNLEG00000035046	SPIDR (ENSNLEG00000013158) #28	KCNB2 (ENSNLEG00000001288)	ENSNLEG00000001291	TERF1 (ENSNLEG00000031169)	SBSPON (ENSNLEG00000001293)	ENSNLEG00000027882	C8orf89 (ENSNLEG00000031508)	ENSNLEG00000031589	RDH10 (ENSNLEG00000031895)
Cercopithecidae	ANCESTRAL SPECIES	14	ENSGT00390000009040 #31	ENSGT00940000154185.l.a.a #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000154351.k.b.a.b.b	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b #24	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00520000055567.a.a.a.e.b	ENSGT00940000156298.t	ENSGT00940000154351.k.b.a.b.a	ENSGT00910000147457	ENSGT00390000001491.a	ENSGT00390000004945	ENSGT00550000074935.u	ENSGT00940000158075
Cercopithecinae	ANCESTRAL SPECIES	16	ENSGT00390000009040 #31	ENSGT00940000154185.l.a.a.a #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000154351.k.b.a.b.b	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b #24	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00520000055567.a.a.a.e.b	ENSGT00940000156298.t	ENSGT00940000154351.k.b.a.b.a	ENSGT00910000147457	ENSGT00390000001491.a	ENSGT00390000004945	ENSGT00550000074935.u	ENSGT00940000158075
Vervet Monkey	MODERN SPECIES	27	ENSCSAG00000018544	MRPL15 (ENSCSAG00000014671) #31	TCEA1 (ENSCSAG00000014680) #10	RGS20 (ENSCSAG00000014690) #11	ATP6V1H (ENSCSAG00000014698) #13	OPRK1 (ENSCSAG00000014703) #14	NPBWR1 (ENSCSAG00000018542)	RB1CC1 (ENSCSAG00000014715) #15	ALKAL1 (ENSCSAG00000014724) #16	ST18 (ENSCSAG00000014731) #17	PCMTD1 (ENSCSAG00000014740) #18	ENSCSAG00000018539	PXDNL (ENSCSAG00000014768)	SNTG1 (ENSCSAG00000014777) #20	PPDPFL (ENSCSAG00000014783) #21	SNAI2 (ENSCSAG00000014787) #22	CLXN (ENSCSAG00000014792) #23	ENSCSAG00000014799 #24	MCM4 (ENSCSAG00000014816) #25	PRKDC (ENSCSAG00000014860) #26	SPIDR (ENSCSAG00000014882) #28	HGSNAT (ENSCSAG00000014893)	POMK (ENSCSAG00000014900)	FNTA (ENSCSAG00000014932)	HOOK3 (ENSCSAG00000014951)	RNF170 (ENSCSAG00000014957)	THAP1 (ENSCSAG00000014961)	CHRNA6 (ENSCSAG00000014981)	CHRNB3 (ENSCSAG00000015002)	SMIM19 (ENSCSAG00000015011)	SLC20A2 (ENSCSAG00000015019)
Cercopithecinae_a	ANCESTRAL SPECIES	15	ENSGT00390000004881.z	ENSGT00940000159123 #11	ENSGT00910000147783	ENSGT00390000003289 #13	ENSGT00940000154351.k.b.a.b.b	ENSGT00940000157341 #14	ENSGT00390000001347.vb.a.b.b.b	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00520000055567.a.a.a.e.b	ENSGT00940000156298.t	ENSGT00940000154351.k.b.a.b.a	ENSGT00910000147457	ENSGT00390000001491.a	ENSGT00390000004945	ENSGT00550000074935.u	ENSGT00940000158075	ENSGT00390000017123.b
Macaca	ANCESTRAL SPECIES	14	ENSGT00390000004881.z	ENSGT00940000159123 #11	ENSGT00910000147783	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00390000001347.vb.a.b.b.b	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00910000147160	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00520000055567.a.a.a.e.b	ENSGT00940000156298.t	ENSGT00390000001491.a	ENSGT00390000004945	ENSGT00550000074935.u	ENSGT00940000158075	ENSGT00390000017123.b	ENSGT00940000159383	ENSGT00940000158062
Pig-tailed macaque	MODERN SPECIES	219											PXDNL (ENSMNEG00000042337)	SNTG1 (ENSMNEG00000040338) #20	ENSMNEG00000039544	ENSMNEG00000038184	PPDPFL (ENSMNEG00000044729) #21	SNAI2 (ENSMNEG00000034216) #22	CLXN (ENSMNEG00000037189) #23	ENSMNEG00000043600 #24
Macaca_a	ANCESTRAL SPECIES	16	ENSGT00940000154185.l.a.a.a #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00910000147783	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.b.a.a.a.b.b.b.a.b.b.a	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00910000147160	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00390000014654 #28	ENSGT00940000156298.t	ENSGT00390000001491.a	ENSGT00940000158075	ENSGT00390000017123.b	ENSGT00940000159383	ENSGT00940000158062	ENSGT01100000263539.b.b.b.b.a.a.b.b.a.a.b	ENSGT00940000156892	ENSGT00390000000436	ENSGT00390000014879.c.b
Rhesus	MODERN SPECIES	18	ENSMMUG00000063928	OPRK1 (ENSMMUG00000065247) #14	ENSMMUG00000062566	NPBWR1 (ENSMMUG00000020909)	ENSMMUG00000057267	RB1CC1 (ENSMMUG00000009990) #15	ALKAL1 (ENSMMUG00000042459) #16	ST18 (ENSMMUG00000008439) #17	PCMTD1 (ENSMMUG00000003347) #18	PXDNL (ENSMMUG00000002781)	ENSMMUG00000060991	SNTG1 (ENSMMUG00000002811) #20	ENSMMUG00000047485	ENSMMUG00000057165	PPDPFL (ENSMMUG00000057040) #21	SNAI2 (ENSMMUG00000016195) #22	CLXN (ENSMMUG00000053238) #23	ENSMMUG00000059736	UBE2V2 (ENSMMUG00000008223) ##24	MCM4 (ENSMMUG00000015360) #25	PRKDC (ENSMMUG00000015347) #26	ENSMMUG00000053228	CEBPD (ENSMMUG00000013151)	ENSMMUG00000054991	SPIDR (ENSMMUG00000013149) #28	ENSMMUG00000049337	ENSMMUG00000004229	HGSNAT (ENSMMUG00000047028)	HOOK3 (ENSMMUG00000019866)	RNF170 (ENSMMUG00000028999)	THAP1 (ENSMMUG00000064084)
Crab-eating macaque	MODERN SPECIES	18	ENSMFAG00000064802	ATP6V1H (ENSMFAG00000032985) #13	OPRK1 (ENSMFAG00000041857) #14	ENSMFAG00000052865	RB1CC1 (ENSMFAG00000001661) #15	ALKAL1 (ENSMFAG00000044072) #16	ENSMFAG00000033133	ST18 (ENSMFAG00000000316) #17	PCMTD1 (ENSMFAG00000005557) #18	PXDNL (ENSMFAG00000037176)	SNTG1 (ENSMFAG00000034236) #20	ENSMFAG00000059129	ENSMFAG00000049535	PPDPFL (ENSMFAG00000044803) #21	ENSMFAG00000050827	SNAI2 (ENSMFAG00000065685) #22	ENSMFAG00000048515	CLXN (ENSMFAG00000044408) #23	UBE2V2 (ENSMFAG00000030364) ##24	MCM4 (ENSMFAG00000035531) #25	ENSMFAG00000008892	ENSMFAG00000058985	ENSMFAG00000049002	SPIDR (ENSMFAG00000043945) #28	ENSMFAG00000013540	OR52E4 (ENSMFAG00000063216)	HOOK3 (ENSMFAG00000035527)	RNF170 (ENSMFAG00000050861)	THAP1 (ENSMFAG00000031016)	CHRNA6 (ENSMFAG00000025645)	ENSMFAG00000056588
Cercopithecinae_b	ANCESTRAL SPECIES	9	ENSGT00390000004881.z	ENSGT00940000159123 #11	ENSGT00910000147783	ENSGT00390000003289 #13	ENSGT00940000154351.k.b.a.b.b	ENSGT00940000157341 #14	ENSGT00390000001347.vb.a.b.b.b	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00520000055567.a.a.a.e.b	ENSGT00940000156298.t	ENSGT00940000154351.k.b.a.b.a	ENSGT00910000147457	ENSGT00390000001491.a	ENSGT00390000004945	ENSGT00550000074935.u	ENSGT00940000158075	ENSGT00390000017123.b
Olive baboon	MODERN SPECIES	18	ENSPANG00000032914	OPRK1 (ENSPANG00000009674) #14	ENSPANG00000041605	RB1CC1 (ENSPANG00000020227) #15	ENSPANG00000045412	ALKAL1 (ENSPANG00000015221) #16	ENSPANG00000040573	ST18 (ENSPANG00000009233) #17	ENSPANG00000042832	ENSPANG00000044009	PCMTD1 (ENSPANG00000013158) #18	ENSPANG00000046588	PXDNL (ENSPANG00000015687)	SNTG1 (ENSPANG00000017058) #20	PPDPFL (ENSPANG00000017056) #21	SNAI2 (ENSPANG00000017540) #22	CLXN (ENSPANG00000007207) #23	ENSPANG00000044905	ENSPANG00000043805	C19orf18 (ENSPANG00000012028)	ZNF606 (ENSPANG00000010429)	UBE2V2 (ENSPANG00000009675) ##24	MCM4 (ENSPANG00000016300) #25	PRKDC (ENSPANG00000025864) #26	CEBPD (ENSPANG00000024953)	SPIDR (ENSPANG00000010031) #28	ENSPANG00000034365	ENSPANG00000020494	ENSPANG00000049209	ENSPANG00000040360	HGSNAT (ENSPANG00000019010)
Cercopithecinae_d	ANCESTRAL SPECIES	206												ENSGT00950000182863.B.a #20	ENSGT00910000147160	ENSGT00940000153241.A.l.a	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00520000055567.a.a.a.e.b	ENSGT00940000156298.t	ENSGT00940000154351.k.b.a.b.a
Sooty mangabey	MODERN SPECIES	189												SNTG1 (ENSCATG00000025859) #20	ENSCATG00000015055	ENSCATG00000029702	PPDPFL (ENSCATG00000034209) #21	SNAI2 (ENSCATG00000028656) #22	CLXN (ENSCATG00000040007) #23	ENSCATG00000034865	MCM4 (ENSCATG00000031400) #25	PRKDC (ENSCATG00000035100) #26	CEBPD (ENSCATG00000043488)	SPIDR (ENSCATG00000014471) #28	ENSCATG00000029616	ENSCATG00000043301	ENSCATG00000037725
Drill	MODERN SPECIES	1306												SNTG1 (ENSMLEG00000032042) #20	ENSMLEG00000026589	ENSMLEG00000026458	PPDPFL (ENSMLEG00000034062) #21	SNAI2 (ENSMLEG00000034407) #22
Rhinopithecus	ANCESTRAL SPECIES	834															ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23
Golden snub-nosed monkey	MODERN SPECIES	3144															PPDPFL (ENSRROG00000032424) #21	SNAI2 (ENSRROG00000032273) #22	CLXN (ENSRROG00000038117) #23	ENSRROG00000031179
Black snub-nosed monkey	MODERN SPECIES	588																SNAI2 (ENSRBIG00000041133) #22	CLXN (ENSRBIG00000038669) #23
Platyrrhini	ANCESTRAL SPECIES	17	ENSGT00390000009040 #31	ENSGT00940000154185.m #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00550000074939.m.a	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00520000055567.a.a.a.e.b
Cebidae	ANCESTRAL SPECIES	19	ENSGT00390000009040.k.a #31	ENSGT00940000154185.m #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00550000074939.m.a	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28
Cebidae_a	ANCESTRAL SPECIES	54	ENSGT00390000009040.k.a #31	ENSGT00940000154185.m #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00550000074939.m.a	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28
Capuchin	MODERN SPECIES	73	RGS20 (ENSCCAG00000029095) #11	ATP6V1H (ENSCCAG00000027346) #13	ENSCCAG00000028173	OPRK1 (ENSCCAG00000033049) #14	RB1CC1 (ENSCCAG00000022175) #15	ALKAL1 (ENSCCAG00000036085) #16	ENSCCAG00000034664	ST18 (ENSCCAG00000022063) #17	PCMTD1 (ENSCCAG00000026243) #18	ENSCCAG00000031107	ENSCCAG00000035295	PXDNL (ENSCCAG00000025900)	SNTG1 (ENSCCAG00000025501) #20	ENSCCAG00000021374	PPDPFL (ENSCCAG00000027219) #21	SNAI2 (ENSCCAG00000024100) #22	EFCAB1 (ENSCCAG00000018583) #23
Bolivian squirrel monkey	MODERN SPECIES	178			TCEA1 (ENSSBOG00000033155) #10	RGS20 (ENSSBOG00000021303) #11	ATP6V1H (ENSSBOG00000030103) #13	ENSSBOG00000025887	OPRK1 (ENSSBOG00000027337) #14	NPBWR1 (ENSSBOG00000014546)	RB1CC1 (ENSSBOG00000023965) #15	ALKAL1 (ENSSBOG00000022434) #16	ST18 (ENSSBOG00000023667) #17	PCMTD1 (ENSSBOG00000014686) #18	PXDNL (ENSSBOG00000027067)	SNTG1 (ENSSBOG00000020909) #20	PPDPFL (ENSSBOG00000031825) #21	SNAI2 (ENSSBOG00000035774) #22	CLXN (ENSSBOG00000031612) #23	ENSSBOG00000029529 #24	MCM4 (ENSSBOG00000020974) #25	PRKDC (ENSSBOG00000032387) #26	SPIDR (ENSSBOG00000029698) #28
Marmoset	MODERN SPECIES	7	ENSCJAG00000083253	PCMTD1 (ENSCJAG00000080020) #18	PXDNL (ENSCJAG00000014675)	ENSCJAG00000074431	ENSCJAG00000074905	ENSCJAG00000082175	ENSCJAG00000077462	SNTG1 (ENSCJAG00000015678) #20	ENSCJAG00000081477	ENSCJAG00000052976	ENSCJAG00000078309	ENSCJAG00000081013	ENSCJAG00000081476	ENSCJAG00000072090	PPDPFL (ENSCJAG00000013496) #21	SNAI2 (ENSCJAG00000013499) #22	ENSCJAG00000055438	CLXN (ENSCJAG00000013505) #23	ENSCJAG00000071460	ENSCJAG00000067665	ENSCJAG00000079937	ENSCJAG00000087171	ENSCJAG00000036984 #24	ENSCJAG00000084260	MCM4 (ENSCJAG00000013526) #25	PRKDC (ENSCJAG00000013572) #26	ENSCJAG00000084327	CEBPD (ENSCJAG00000013678)	SPIDR (ENSCJAG00000013681) #28	ENSCJAG00000033335	ENSCJAG00000059708
Mas night monkey	MODERN SPECIES	657	RGS20 (ENSANAG00000034281) #11	ATP6V1H (ENSANAG00000012840) #13	ENSANAG00000035847	OPRK1 (ENSANAG00000033012) #14	NPBWR1 (ENSANAG00000004911)	ENSANAG00000022735	RB1CC1 (ENSANAG00000029285) #15	ALKAL1 (ENSANAG00000030352) #16	ENSANAG00000031552	ST18 (ENSANAG00000030299) #17	PCMTD1 (ENSANAG00000003477) #18	ENSANAG00000024030	PXDNL (ENSANAG00000025434)	SNTG1 (ENSANAG00000024114) #20	PPDPFL (ENSANAG00000022280) #21	SNAI2 (ENSANAG00000021163) #22	CLXN (ENSANAG00000032509) #23	ENSANAG00000027457	ENSANAG00000024543 #24	MCM4 (ENSANAG00000026411) #25	PRKDC (ENSANAG00000028345) #26	CEBPD (ENSANAG00000022717)	ENSANAG00000029937	SPIDR (ENSANAG00000029053) #28	ENSANAG00000034816	ENSANAG00000023377
Tarsier	MODERN SPECIES	6690															PPDPFL (ENSTSYG00000013987) #21	SNAI2 (ENSTSYG00000030892) #22
Euarchontoglires_A	ANCESTRAL SPECIES	19	ENSGT00940000156694 #32	ENSGT00390000009040 #31	ENSGT00940000154185 #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28
Glires	ANCESTRAL SPECIES	20	ENSGT00940000156694 #32	ENSGT00390000009040 #31	ENSGT00940000154185 #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28
Rodentia	ANCESTRAL SPECIES	19	ENSGT00940000156694 #32	ENSGT00390000009040 #31	ENSGT00940000154185 #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28
Rodentia_B	ANCESTRAL SPECIES	17	ENSGT00940000164647	ENSGT00940000154242.b #33	ENSGT00940000156694 #32	ENSGT00390000009040 #31	ENSGT00940000154185 #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b.d #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28
Myomorpha	ANCESTRAL SPECIES	74																ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b.d #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28
Muroidea	ANCESTRAL SPECIES	94																ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b.d #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28
Muroidea_A	ANCESTRAL SPECIES	17																ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b.d #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00940000158677	ENSGT00390000013709.b	ENSGT00940000155504	ENSGT00940000155765	ENSGT00390000014845	ENSGT00900000141099.c	ENSGT00940000164874	ENSGT00940000161017	ENSGT00940000156516
Cricetidae	ANCESTRAL SPECIES	16																ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b.d #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00940000158677	ENSGT00390000013709.b	ENSGT00940000155504	ENSGT00940000155765	ENSGT00390000014845	ENSGT00900000141099.c	ENSGT00940000164874	ENSGT00940000161017	ENSGT00940000156516
Cricetinae	ANCESTRAL SPECIES	19	ENSGT00390000006068	ENSGT01030000234518.B.b	ENSGT00940000161956	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00940000153505.a.a.c.a.a.a.a.a.a	ENSGT00940000153505.a.a.c.a.a.b	ENSGT00940000153505.a.a.c.a.a.a.b.b	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b.d #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00940000158677	ENSGT00390000013709.b	ENSGT00940000155504	ENSGT00940000155765	ENSGT00390000014845
Chinese hamster chok1gshd	MODERN SPECIES	130	Cox19 (ENSCGRG00001024529)	Adap1 (ENSCGRG00001006563)	Get4 (ENSCGRG00001014454)	Sun1 (ENSCGRG00001019963)	Dnaaf5 (ENSCGRG00001013336)	Prkar1b (ENSCGRG00001017893)	Pdgfa (ENSCGRG00001019349)	Foxl3 (ENSCGRG00001005158)	Fam20c (ENSCGRG00001009787)	ENSCGRG00001014517	Zfp68 (ENSCGRG00001024349)	ENSCGRG00001011134	ENSCGRG00001017912	ENSCGRG00001018731	Zfp157 (ENSCGRG00001012834)	Snai2 (ENSCGRG00001013674) #22	Efcab1 (ENSCGRG00001015295) #23	ENSCGRG00001014373 #24	Mcm4 (ENSCGRG00001019609) #25	Prkdc (ENSCGRG00001003779) #26	Spidr (ENSCGRG00001017594) #28	Cebpd (ENSCGRG00001010010)	Pkp2 (ENSCGRG00001013847)	Yars2 (ENSCGRG00001019281)	Dnm1l (ENSCGRG00001021788)	Fgd4 (ENSCGRG00001015663)	Mzt2 (ENSCGRG00001024758)	Or7a40 (ENSCGRG00001005149)
Golden Hamster	MODERN SPECIES	712	C130050O18Rik (ENSMAUG00000014842)	Gpr146 (ENSMAUG00000005533)	Cyp2w1 (ENSMAUG00000021456)	Cox19 (ENSMAUG00000019244)	Adap1 (ENSMAUG00000012540)	Get4 (ENSMAUG00000012483)	Sun1 (ENSMAUG00000016426)	Dnaaf5 (ENSMAUG00000021545)	Prkar1b (ENSMAUG00000008747)	Pdgfa (ENSMAUG00000021539)	Foxl3 (ENSMAUG00000009578)	Fam20c (ENSMAUG00000002295)	ENSMAUG00000021089	ENSMAUG00000018743	Zfp157 (ENSMAUG00000005490)	Snai2 (ENSMAUG00000008119) #22	Efcab1 (ENSMAUG00000021514) #23	ENSMAUG00000009463	ENSMAUG00000006891 #24	ENSMAUG00000021693	Mcm4 (ENSMAUG00000018869) #25	Prkdc (ENSMAUG00000013266) #26	Cebpd (ENSMAUG00000010186)	Spidr (ENSMAUG00000013933) #28
Cricetidae_B	ANCESTRAL SPECIES	13																ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.b.d #24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00940000158677	ENSGT00390000013709.b	ENSGT00940000155504	ENSGT00940000155765	ENSGT00390000014845	ENSGT00900000141099.c	ENSGT00940000164874	ENSGT00940000161017	ENSGT00940000156516
Northern American deer mouse	MODERN SPECIES	3																Snai2 (ENSPEMG00000011739) #22	Efcab1 (ENSPEMG00000010596) #23	ENSPEMG00000013862 #24	Mcm4 (ENSPEMG00000016455) #25	Prkdc (ENSPEMG00000006101) #26	Cebpd (ENSPEMG00000006910)	Spidr (ENSPEMG00000007140) #28	Pkp2 (ENSPEMG00000011549)	Yars2 (ENSPEMG00000007655)	Dnm1l (ENSPEMG00000000455)	Fgd4 (ENSPEMG00000007078)	ENSPEMG00000029086	Mzt2 (ENSPEMG00000001020)	ENSPEMG00000025802	Or7a40 (ENSPEMG00000000794)	Spag6l (ENSPEMG00000026249)
Prairie vole	MODERN SPECIES	160																Snai2 (ENSMOCG00000006622) #22	Efcab1 (ENSMOCG00000001248) #23	ENSMOCG00000002368 #24	ENSMOCG00000017342 #25	Prkdc (ENSMOCG00000014871) #26	Cebpd (ENSMOCG00000003699)	Spidr (ENSMOCG00000016918) #28	Pkp2 (ENSMOCG00000001368)	Yars2 (ENSMOCG00000011433)	Dnm1l (ENSMOCG00000006970)	Fgd4 (ENSMOCG00000005834)	Mzt2 (ENSMOCG00000014389)	ENSMOCG00000015664	ENSMOCG00000010843
Murinae	ANCESTRAL SPECIES	13																ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00390000014845	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00940000158677	ENSGT00390000013709.b	ENSGT00940000155504	ENSGT00940000155765	ENSGT00900000141099.c	ENSGT00940000164874	ENSGT00940000161017	ENSGT00940000156516
Mus	ANCESTRAL SPECIES	13	ENSGT00390000005386	ENSGT00940000157803	ENSGT00940000162720.a.a	ENSGT00390000001488	ENSGT00390000016730	ENSGT00390000009628	ENSGT00730000111088	ENSGT00950000182857.a.a.b.a.r.b.a.a.d	ENSGT00440000038745.b	ENSGT00390000002393	ENSGT00390000000111.b.b	ENSGT00940000155421.b	ENSGT00390000007773	ENSGT00940000160271	ENSGT00940000161777.a.b	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00390000014845	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00940000158677	ENSGT00390000013709.b	ENSGT00940000155504	ENSGT00940000155765	ENSGT00940000153523.a	ENSGT00900000141099.c	ENSGT00940000164874	ENSGT00940000161017.h
Mus_A	ANCESTRAL SPECIES	18	ENSGT00940000157803	ENSGT00940000162720.a.a	ENSGT00390000001488	ENSGT00390000016730	ENSGT00390000009628	ENSGT00730000111088	ENSGT00950000182857.a.a.b.a.r.b.a.a.d	ENSGT00440000038745.b	ENSGT00390000002393	ENSGT00390000000111.b.b	ENSGT00940000155421.b	ENSGT00390000007773	ENSGT00940000160271	ENSGT00940000161777.a.b	ENSGT00940000168647	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00390000014845	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00940000158677	ENSGT00390000013709.b	ENSGT00940000155504	ENSGT00940000155765	ENSGT00940000153523.a	ENSGT00900000141099.c	ENSGT00940000164874	ENSGT00940000161017.h
Mus_B	ANCESTRAL SPECIES	18	ENSGT00940000157803	ENSGT00940000162720.a.a	ENSGT00390000001488	ENSGT00390000016730	ENSGT00390000009628	ENSGT00730000111088	ENSGT00950000182857.a.a.b.a.r.b.a.a.d	ENSGT00440000038745.b	ENSGT00390000002393	ENSGT00390000000111.b.b	ENSGT00940000155421.b	ENSGT00390000007773	ENSGT00940000160271	ENSGT00940000161777.a.b	ENSGT00940000168647	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00390000014845	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00940000158677	ENSGT00390000013709.b	ENSGT00940000155504	ENSGT00940000155765	ENSGT00940000153523.a	ENSGT00900000141099.c	ENSGT00940000164874	ENSGT00940000161017.h
Mus_C	ANCESTRAL SPECIES	12	ENSGT00390000005386	ENSGT00940000157803	ENSGT00390000001488	ENSGT00390000016730	ENSGT00390000009628	ENSGT00730000111088	ENSGT00950000182857.a.a.b.a.r.b.a.a.d	ENSGT00440000038745.b	ENSGT00390000002393	ENSGT00390000000111.b.b	ENSGT00940000155421.b	ENSGT00390000007773	ENSGT00940000160271	ENSGT00940000161777.a.b	ENSGT00940000168647	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00390000014845	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00940000158677	ENSGT00390000013709.b	ENSGT00940000155504	ENSGT00940000155765	ENSGT00940000153523.a	ENSGT00900000141099.c	ENSGT00940000164874	ENSGT00940000161017.h
spretus	MODERN SPECIES	7	Pla2g10 (MGP_SPRETEiJ_G0021364)	Rrn3 (MGP_SPRETEiJ_G0021365)	Ntan1 (MGP_SPRETEiJ_G0021366)	Pdxdc1 (MGP_SPRETEiJ_G0021367)	Mpv17l (MGP_SPRETEiJ_G0021368)	MGP_SPRETEiJ_G0021369	MGP_SPRETEiJ_G0021370	Bmerb1 (MGP_SPRETEiJ_G0021371)	Marf1 (MGP_SPRETEiJ_G0021372)	Nde1 (MGP_SPRETEiJ_G0021373)	Myh11 (MGP_SPRETEiJ_G0021374)	Cep20 (MGP_SPRETEiJ_G0021375)	Abcc1 (MGP_SPRETEiJ_G0021376)	MGP_SPRETEiJ_G0021377	MGP_SPRETEiJ_G0021378	Snai2 (MGP_SPRETEiJ_G0021379) #22	Efcab1 (MGP_SPRETEiJ_G0021380) #23	Mcm4 (MGP_SPRETEiJ_G0021381) #25	Prkdc (MGP_SPRETEiJ_G0021382) #26	Mzt2 (MGP_SPRETEiJ_G0021383)	Spidr (MGP_SPRETEiJ_G0021384) #28	Pkp2 (MGP_SPRETEiJ_G0021385)	Yars2 (MGP_SPRETEiJ_G0021386)	Dnm1l (MGP_SPRETEiJ_G0021387)	Fgd4 (MGP_SPRETEiJ_G0021388)	Or7a40 (MGP_SPRETEiJ_G0021389)	Spag6l (MGP_SPRETEiJ_G0021390)	Igll1 (MGP_SPRETEiJ_G0021391)	MGP_SPRETEiJ_G0021392	Vpreb1b (MGP_SPRETEiJ_G0021393)	Top3b (MGP_SPRETEiJ_G0021394)
Mouse	MODERN SPECIES	7	Parn (ENSMUSG00000022685)	Bfar (ENSMUSG00000022684)	Pla2g10 (ENSMUSG00000022683)	A930007A09Rik (ENSMUSG00000118559)	Rrn3 (ENSMUSG00000022682)	Ntan1 (ENSMUSG00000022681)	Pdxdc1 (ENSMUSG00000022680)	Mpv17l (ENSMUSG00000022679)	Ifitm7 (ENSMUSG00000065968)	Bmerb1 (ENSMUSG00000044117)	Marf1 (ENSMUSG00000060657)	Nde1 (ENSMUSG00000022678)	Myh11 (ENSMUSG00000018830)	Cep20 (ENSMUSG00000022677)	Abcc1 (ENSMUSG00000023088)	Snai2 (ENSMUSG00000022676) #22	Efcab1 (ENSMUSG00000068617) #23	Ube2v2 (ENSMUSG00000022674) ##24	Mcm4 (ENSMUSG00000022673) #25	Prkdc (ENSMUSG00000022672) #26	Mzt2 (ENSMUSG00000022671)	Cebpd (ENSMUSG00000071637)	Spidr (ENSMUSG00000041974) #28	Pkp2 (ENSMUSG00000041957)	Yars2 (ENSMUSG00000022792)	Dnm1l (ENSMUSG00000022789)	Fgd4 (ENSMUSG00000022788)	Or7a40 (ENSMUSG00000048101)	Spag6l (ENSMUSG00000022783)	Igll1 (ENSMUSG00000075370)	Vpreb1a (ENSMUSG00000059305)
Ryukyu mouse	MODERN SPECIES	7	MGP_CAROLIEiJ_G0020468	Pla2g10 (MGP_CAROLIEiJ_G0020469)	Rrn3 (MGP_CAROLIEiJ_G0020470)	Ntan1 (MGP_CAROLIEiJ_G0020471)	Pdxdc1 (MGP_CAROLIEiJ_G0020472)	Mpv17l (MGP_CAROLIEiJ_G0020473)	MGP_CAROLIEiJ_G0020474	Bmerb1 (MGP_CAROLIEiJ_G0020475)	Marf1 (MGP_CAROLIEiJ_G0020476)	Nde1 (MGP_CAROLIEiJ_G0020477)	Myh11 (MGP_CAROLIEiJ_G0020478)	Cep20 (MGP_CAROLIEiJ_G0020479)	Abcc1 (MGP_CAROLIEiJ_G0020480)	MGP_CAROLIEiJ_G0020481	MGP_CAROLIEiJ_G0020482	Snai2 (MGP_CAROLIEiJ_G0020483) #22	Efcab1 (MGP_CAROLIEiJ_G0020484) #23	Ube2v2 (MGP_CAROLIEiJ_G0020485) ##24	Mcm4 (MGP_CAROLIEiJ_G0020486) #25	Prkdc (MGP_CAROLIEiJ_G0020487) #26	Mzt2 (MGP_CAROLIEiJ_G0020488)	Spidr (MGP_CAROLIEiJ_G0020489) #28	Pkp2 (MGP_CAROLIEiJ_G0020490)	Yars2 (MGP_CAROLIEiJ_G0020491)	Dnm1l (MGP_CAROLIEiJ_G0020492)	Fgd4 (MGP_CAROLIEiJ_G0020493)	Or7a40 (MGP_CAROLIEiJ_G0020494)	Spag6l (MGP_CAROLIEiJ_G0020495)	Igll1 (MGP_CAROLIEiJ_G0020496)	MGP_CAROLIEiJ_G0020497	MGP_CAROLIEiJ_G0020498
Shrew mouse	MODERN SPECIES	3	Bfar (MGP_PahariEiJ_G0016173)	MGP_PahariEiJ_G0016174	Pla2g10 (MGP_PahariEiJ_G0016175)	Rrn3 (MGP_PahariEiJ_G0016176)	Ntan1 (MGP_PahariEiJ_G0016177)	Pdxdc1 (MGP_PahariEiJ_G0016178)	Mpv17l (MGP_PahariEiJ_G0016179)	MGP_PahariEiJ_G0016180	Bmerb1 (MGP_PahariEiJ_G0016181)	Marf1 (MGP_PahariEiJ_G0016182)	Nde1 (MGP_PahariEiJ_G0016183)	Myh11 (MGP_PahariEiJ_G0016184)	Cep20 (MGP_PahariEiJ_G0016185)	Abcc1 (MGP_PahariEiJ_G0016186)	MGP_PahariEiJ_G0016187	Snai2 (MGP_PahariEiJ_G0016188) #22	Efcab1 (MGP_PahariEiJ_G0016189) #23	Ube2v2 (MGP_PahariEiJ_G0016190) ##24	Mcm4 (MGP_PahariEiJ_G0016191) #25	Prkdc (MGP_PahariEiJ_G0016192) #26	Mzt2 (MGP_PahariEiJ_G0016193)	Spidr (MGP_PahariEiJ_G0016194) #28	Pkp2 (MGP_PahariEiJ_G0016195)	Yars2 (MGP_PahariEiJ_G0016196)	Dnm1l (MGP_PahariEiJ_G0016197)	Fgd4 (MGP_PahariEiJ_G0016198)	Or7a40 (MGP_PahariEiJ_G0016199)	Spag6l (MGP_PahariEiJ_G0016200)	Igll1 (MGP_PahariEiJ_G0016201)	MGP_PahariEiJ_G0016202	MGP_PahariEiJ_G0016203
Kangaroo rat	MODERN SPECIES	328	Rp1 (ENSDORG00000009139) #33	Sox17 (ENSDORG00000027735) #32	Mrpl15 (ENSDORG00000012200) #31	Lypla1 (ENSDORG00000001479) #30	Tcea1 (ENSDORG00000015058) #10	ENSDORG00000006333 #11	Atp6v1h (ENSDORG00000007689) #13	Oprk1 (ENSDORG00000009506) #14	Npbwr1 (ENSDORG00000013949)	ENSDORG00000005679 #15	ENSDORG00000029422 #15	Alkal1 (ENSDORG00000001904) #16	St18 (ENSDORG00000002635) #17	Pcmtd1 (ENSDORG00000025253) #18	Sntg1 (ENSDORG00000010206) #20	Snai2 (ENSDORG00000029620) #22	Efcab1 (ENSDORG00000000823) #23	Ube2v2 (ENSDORG00000029077) ##24	ENSDORG00000004422 #25	Prkdc (ENSDORG00000004417) #26	ENSDORG00000025707	Itgb1 (ENSDORG00000007780)	Nrp1 (ENSDORG00000002431)	Pard3 (ENSDORG00000000366)	ENSDORG00000024661	ENSDORG00000000755	Crem (ENSDORG00000001162)	Ccny (ENSDORG00000000413)	ENSDORG00000003285	Fzd8 (ENSDORG00000026114)	ENSDORG00000027205
Rodentia_A	ANCESTRAL SPECIES	18	ENSGT00940000156694 #32	ENSGT00390000009040 #31	ENSGT00940000154185 #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28
Sciuridae	ANCESTRAL SPECIES	17	ENSGT00940000156694 #32	ENSGT00390000009040 #31	ENSGT00940000154185 #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032
Marmotini	ANCESTRAL SPECIES	10	ENSGT00940000156694 #32	ENSGT00390000009040 #31	ENSGT00940000154185 #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00940000168767	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28
Alpin marmot	MODERN SPECIES	16	TCEA1 (ENSMMMG00000000970) #10	ATP6V1H (ENSMMMG00000000819) #13	OPRK1 (ENSMMMG00000000792) #14	ENSMMMG00000000769	ENSMMMG00000000761	NPBWR1 (ENSMMMG00000000755)	RB1CC1 (ENSMMMG00000000733) #15	ALKAL1 (ENSMMMG00000000712) #16	ST18 (ENSMMMG00000000496) #17	ENSMMMG00000000469	PCMTD1 (ENSMMMG00000000404) #18	PXDNL (ENSMMMG00000000367)	SNTG1 (ENSMMMG00000000104) #20	ENSMMMG00000000024	ENSMMMG00000000012 #21	SNAI2 (ENSMMMG00000022198) #22	CLXN (ENSMMMG00000022191) #23	ENSMMMG00000022170	ENSMMMG00000022167	ENSMMMG00000022157	ENSMMMG00000022151	ENSMMMG00000022149	UBE2V2 (ENSMMMG00000022141) ##24	MCM4 (ENSMMMG00000022114) #25	PRKDC (ENSMMMG00000022087) #26	CEBPD (ENSMMMG00000022067)	ENSMMMG00000022065	SPIDR (ENSMMMG00000021918) #28
Marmotini_b	ANCESTRAL SPECIES	52	ENSGT00940000154242.b #33	ENSGT00940000156694 #32	ENSGT00390000009040 #31	ENSGT00940000154185 #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00390000009113.a.b #21	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00940000168767	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28
Squirrel	MODERN SPECIES	190								NPBWR1 (ENSSTOG00000031799)	ENSSTOG00000033788	RB1CC1 (ENSSTOG00000003037) #15	ALKAL1 (ENSSTOG00000003032) #16	ST18 (ENSSTOG00000016500) #17	ENSSTOG00000027757	PCMTD1 (ENSSTOG00000005412) #18	SNTG1 (ENSSTOG00000006780) #20	SNAI2 (ENSSTOG00000028743) #22	CLXN (ENSSTOG00000005832) #23	ENSSTOG00000033326	UBE2V2 (ENSSTOG00000021769) ##24	MCM4 (ENSSTOG00000009905) #25	PRKDC (ENSSTOG00000009784) #26	SPIDR (ENSSTOG00000010890) #28
Arctic ground squirrel	MODERN SPECIES	153														SNTG1 (ENSUPAG00010003450) #20	PPDPFL (ENSUPAG00010003436) #21	SNAI2 (ENSUPAG00010003430) #22	CLXN (ENSUPAG00010003417) #23	ENSUPAG00010003410	ENSUPAG00010003405	UBE2V2 (ENSUPAG00010003380) ##24	MCM4 (ENSUPAG00010003343) #25	PRKDC (ENSUPAG00010003246) #26	CEBPD (ENSUPAG00010003242)	ENSUPAG00010003234	SPIDR (ENSUPAG00010003215) #28
Eurasian red squirrel	MODERN SPECIES		ENSSVLG00005009270	OPRK1 (ENSSVLG00005009227) #14	ENSSVLG00005009204	ENSSVLG00005009187	NPBWR1 (ENSSVLG00005009175)	ENSSVLG00005009157	RB1CC1 (ENSSVLG00005009081) #15	ALKAL1 (ENSSVLG00005009002) #16	ENSSVLG00005008883 #17	ENSSVLG00005008837	PCMTD1 (ENSSVLG00005008801) #18	PXDNL (ENSSVLG00005008684)	SNTG1 (ENSSVLG00005007613) #20	PPDPFL (ENSSVLG00005007203) #21	ENSSVLG00005007187	SNAI2 (ENSSVLG00005007170) #22	ENSSVLG00005007144	CLXN (ENSSVLG00005007101) #23	ENSSVLG00005007072	ENSSVLG00005007058	ENSSVLG00005007040	UBE2V2 (ENSSVLG00005006994) ##24	MCM4 (ENSSVLG00005006762) #25	CEBPD (ENSSVLG00005006258)	SUPT3H (ENSSVLG00005006225)	ENSSVLG00005006182	SPIDR (ENSSVLG00005005941) #28	ENSSVLG00005005907	HSD17B7 (ENSSVLG00005005883)	DDR2 (ENSSVLG00005005804)	UAP1 (ENSSVLG00005005747)
Hystricomorpha	ANCESTRAL SPECIES	12	ENSGT01070000253766.A.b #34	ENSGT00940000154242.b #33	ENSGT00940000156694 #32	ENSGT00390000009040 #31	ENSGT00940000154185.cb #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871.v #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00940000163032	ENSGT00390000014654 #28	ENSGT00940000155908.b	ENSGT00940000161075	ENSGT00940000157478	ENSGT00940000157170	ENSGT00390000010251	ENSGT01050000244857.A.a.a	ENSGT00940000158219	ENSGT00940000155474	ENSGT00390000008766
Hystricomorpha_a	ANCESTRAL SPECIES	9	ENSGT01070000253766.A.b #34	ENSGT00940000154242.b #33	ENSGT00940000156694 #32	ENSGT00390000009040 #31	ENSGT00940000154185.cb #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871.v #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00390000014654 #28	ENSGT00940000155908.b	ENSGT00940000161075	ENSGT00940000157478	ENSGT00940000157170	ENSGT00390000010251	ENSGT01050000244857.A.a.a	ENSGT00940000158219	ENSGT00940000155474	ENSGT00390000008766	ENSGT00940000161720
Hystricomorpha_b	ANCESTRAL SPECIES	27	ENSGT00390000011782 #35	ENSGT01070000253766.A.b #34	ENSGT00940000154242.b #33	ENSGT00390000009040 #31	ENSGT00940000154185.bb.a #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871.v #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00950000182863.B.a #20	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000155633.D #26	ENSGT00390000014654 #28	ENSGT00940000155908.b	ENSGT00940000161075	ENSGT00940000157478	ENSGT00940000157170	ENSGT00390000010251	ENSGT01050000244857.A.a.a	ENSGT00940000158219	ENSGT00940000155474	ENSGT00390000008766	ENSGT00940000161720
Long-tailed chinchilla	MODERN SPECIES	161	XKR4 (ENSCLAG00000010575) #34	ENSCLAG00000011553 #33	MRPL15 (ENSCLAG00000010064) #31	ENSCLAG00000014943 #30	TCEA1 (ENSCLAG00000013516) #10	ENSCLAG00000016009 #11	ATP6V1H (ENSCLAG00000009337) #13	OPRK1 (ENSCLAG00000009850) #14	ENSCLAG00000009340	RB1CC1 (ENSCLAG00000009807) #15	ENSCLAG00000014346 #16	ST18 (ENSCLAG00000011202) #17	PCMTD1 (ENSCLAG00000009964) #18	ENSCLAG00000014877	SNTG1 (ENSCLAG00000013065) #20	SNAI2 (ENSCLAG00000011797) #22	CLXN (ENSCLAG00000015811) #23	UBE2V2 (ENSCLAG00000010839) ##24	MCM4 (ENSCLAG00000014363) #25	PRKDC (ENSCLAG00000009459) #26	SPIDR (ENSCLAG00000009550) #28	ENSCLAG00000009679	ENSCLAG00000017747	IQSEC3 (ENSCLAG00000011610)	SLC6A12 (ENSCLAG00000016481)	SLC6A13 (ENSCLAG00000012266)	KDM5A (ENSCLAG00000012583)	CCDC77 (ENSCLAG00000013123)	ENSCLAG00000012835	B4GALNT3 (ENSCLAG00000010895)	NINJ2 (ENSCLAG00000013545)
Lagomorpha	ANCESTRAL SPECIES	112	ENSGT00940000156694.gb #32	ENSGT00390000009040 #31	ENSGT00940000154185 #30	ENSGT00940000155121 #10	ENSGT00940000159123 #11	ENSGT00390000003289 #13	ENSGT00940000157341 #14	ENSGT00940000161936	ENSGT00390000015871 #15	ENSGT00940000159969.a #16	ENSGT00940000159905 #17	ENSGT00950000183032.A.a #18	ENSGT00940000163562	ENSGT00390000009113.a.b #21	ENSGT00940000154681.a	ENSGT00940000154511.b #22	ENSGT00940000159968 #23	ENSGT00740000115534.a.b.f.a.a ##24	ENSGT01050000244824.A #25	ENSGT00940000163032	ENSGT00390000014654 #28
Pika	MODERN SPECIES	379																ENSOPRG00000012639 #22	ENSOPRG00000012628 #23