Glires	ANCESTRAL SPECIES	4	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00940000168034	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00940000168034	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348
Muroidea	ANCESTRAL SPECIES	5	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348.k
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348.k
Murinae	ANCESTRAL SPECIES	10	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348.k
Mus	ANCESTRAL SPECIES	11	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00800000125318 #30	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37
Shrew mouse	MODERN SPECIES	8	Trabd (MGP_PahariEiJ_G0020155) #7	Panx2 (MGP_PahariEiJ_G0020154) #8	Mov10l1 (MGP_PahariEiJ_G0020153) #9	Mlc1 (MGP_PahariEiJ_G0020152) #10	Ttll8 (MGP_PahariEiJ_G0020151) #11	Pim3 (MGP_PahariEiJ_G0020150) #12	Creld2 (MGP_PahariEiJ_G0020149) #13	Alg12 (MGP_PahariEiJ_G0020148) #14	MGP_PahariEiJ_G0020147 #15	Brd1 (MGP_PahariEiJ_G0020146) #16	Zdhhc25 (MGP_PahariEiJ_G0020145) #17	MGP_PahariEiJ_G0020144 #18	Tbc1d22a (MGP_PahariEiJ_G0020143) #19	Cerk (MGP_PahariEiJ_G0020142) #20	MGP_PahariEiJ_G0020141 #21	Celsr1 (MGP_PahariEiJ_G0020140) #22	Trmu (MGP_PahariEiJ_G0020139) #23	Gtse1 (MGP_PahariEiJ_G0020138) #24	Ttc38 (MGP_PahariEiJ_G0020137) #25	Pkdrej (MGP_PahariEiJ_G0020136) #26	Cdpf1 (MGP_PahariEiJ_G0020135) #27	Ppara (MGP_PahariEiJ_G0020134) #28	MGP_PahariEiJ_G0020133 #29	MGP_PahariEiJ_G0020132 #30	Atxn10 (MGP_PahariEiJ_G0020131) #31	Fbln1 (MGP_PahariEiJ_G0020130) #32	Ribc2 (MGP_PahariEiJ_G0020129) #33	Smc1b (MGP_PahariEiJ_G0020128) #34	Fam118a (MGP_PahariEiJ_G0020127) #35	Upk3a (MGP_PahariEiJ_G0020126) #36	5031439G07Rik (MGP_PahariEiJ_G0020125) #37
Mus_A	ANCESTRAL SPECIES	13	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00800000125318 #30	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37
Mus_B	ANCESTRAL SPECIES	12	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00800000125318 #30	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37
Mouse	MODERN SPECIES	6	Trabd (ENSMUSG00000015363) #7	Panx2 (ENSMUSG00000058441) #8	Mov10l1 (ENSMUSG00000015365) #9	Mlc1 (ENSMUSG00000035805) #10	Ttll8 (ENSMUSG00000022388) #11	Pim3 (ENSMUSG00000035828) #12	Creld2 (ENSMUSG00000023272) #13	Alg12 (ENSMUSG00000035845) #14	Zbed4 (ENSMUSG00000034333) #15	Brd1 (ENSMUSG00000022387) #16	Zdhhc25 (ENSMUSG00000054117) #17	Tafa5 (ENSMUSG00000054863) #18	Tbc1d22a (ENSMUSG00000051864) #19	Cerk (ENSMUSG00000035891) #20	Gramd4 (ENSMUSG00000035900) #21	Celsr1 (ENSMUSG00000016028) #22	Trmu (ENSMUSG00000022386) #23	Gtse1 (ENSMUSG00000022385) #24	Ttc38 (ENSMUSG00000035944) #25	Pkdrej (ENSMUSG00000052496) #26	Cdpf1 (ENSMUSG00000064284) #27	Ppara (ENSMUSG00000022383) #28	Wnt7b (ENSMUSG00000022382) #29	7530416G11Rik (ENSMUSG00000096607) #30	Atxn10 (ENSMUSG00000016541) #31	Fbln1 (ENSMUSG00000006369) #32	Ribc2 (ENSMUSG00000022431) #33	Smc1b (ENSMUSG00000022432) #34	Fam118a (ENSMUSG00000022434) #35	Upk3a (ENSMUSG00000022435) #36	5031439G07Rik (ENSMUSG00000036046) #37
Mus_C	ANCESTRAL SPECIES	17	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00800000125318 #30	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37
spretus	MODERN SPECIES	6	MGP_SPRETEiJ_G0021048	Trabd (MGP_SPRETEiJ_G0021047) #7	Panx2 (MGP_SPRETEiJ_G0021046) #8	Mov10l1 (MGP_SPRETEiJ_G0021045) #9	Mlc1 (MGP_SPRETEiJ_G0021044) #10	Ttll8 (MGP_SPRETEiJ_G0021043) #11	Pim3 (MGP_SPRETEiJ_G0021042) #12	Creld2 (MGP_SPRETEiJ_G0021041) #13	Alg12 (MGP_SPRETEiJ_G0021040) #14	Brd1 (MGP_SPRETEiJ_G0021038) #16	Zdhhc25 (MGP_SPRETEiJ_G0021037) #17	MGP_SPRETEiJ_G0021036 #18	Tbc1d22a (MGP_SPRETEiJ_G0021035) #19	Cerk (MGP_SPRETEiJ_G0021034) #20	Gramd4 (MGP_SPRETEiJ_G0021033) #21	Celsr1 (MGP_SPRETEiJ_G0021032) #22	Trmu (MGP_SPRETEiJ_G0021031) #23	Gtse1 (MGP_SPRETEiJ_G0021030) #24	Ttc38 (MGP_SPRETEiJ_G0021029) #25	Pkdrej (MGP_SPRETEiJ_G0021028) #26	Cdpf1 (MGP_SPRETEiJ_G0021027) #27	Ppara (MGP_SPRETEiJ_G0021026) #28	MGP_SPRETEiJ_G0021025 #29	7530416G11Rik (MGP_SPRETEiJ_G0021024) #30	Atxn10 (MGP_SPRETEiJ_G0021023) #31	Fbln1 (MGP_SPRETEiJ_G0021022) #32	Ribc2 (MGP_SPRETEiJ_G0021021) #33	Smc1b (MGP_SPRETEiJ_G0021020) #34	Fam118a (MGP_SPRETEiJ_G0021019) #35	Upk3a (MGP_SPRETEiJ_G0021018) #36	5031439G07Rik (MGP_SPRETEiJ_G0021017) #37
Steppe mouse	MODERN SPECIES	3375	Selenoo (ENSMSIG00000021500)	Panx2 (ENSMSIG00000021430) #8	Mov10l1 (ENSMSIG00000021302) #9	Mlc1 (ENSMSIG00000021277) #10	Ttll8 (ENSMSIG00000021260) #11	Pim3 (ENSMSIG00000021238) #12	Creld2 (ENSMSIG00000021208) #13	Alg12 (ENSMSIG00000021177) #14	Zbed4 (ENSMSIG00000021169) #15	Brd1 (ENSMSIG00000021095) #16	Zdhhc25 (ENSMSIG00000021088) #17	Tafa5 (ENSMSIG00000021044) #18	Tbc1d22a (ENSMSIG00000021000) #19	Cerk (ENSMSIG00000020935) #20	Gramd4 (ENSMSIG00000020801) #21	Celsr1 (ENSMSIG00000019330) #22	Trmu (ENSMSIG00000019299) #23	Gtse1 (ENSMSIG00000019265) #24	Ttc38 (ENSMSIG00000019196) #25	Pkdrej (ENSMSIG00000019190) #26	Cdpf1 (ENSMSIG00000019085) #27	Ppara (ENSMSIG00000019058) #28	ENSMSIG00000018950 #29	7530416G11Rik (ENSMSIG00000018941) #30	ENSMSIG00000018885 #31	Fbln1 (ENSMSIG00000018794) #32	Ribc2 (ENSMSIG00000018774) #33	Smc1b (ENSMSIG00000018736) #34	Fam118a (ENSMSIG00000018681) #35	Upk3a (ENSMSIG00000018665) #36	5031439G07Rik (ENSMSIG00000018648) #37
Ryukyu mouse	MODERN SPECIES	6	MGP_CAROLIEiJ_G0020151	Trabd (MGP_CAROLIEiJ_G0020150) #7	Panx2 (MGP_CAROLIEiJ_G0020149) #8	Mov10l1 (MGP_CAROLIEiJ_G0020148) #9	Mlc1 (MGP_CAROLIEiJ_G0020147) #10	Ttll8 (MGP_CAROLIEiJ_G0020146) #11	Pim3 (MGP_CAROLIEiJ_G0020145) #12	Creld2 (MGP_CAROLIEiJ_G0020144) #13	Alg12 (MGP_CAROLIEiJ_G0020143) #14	Brd1 (MGP_CAROLIEiJ_G0020141) #16	Zdhhc25 (MGP_CAROLIEiJ_G0020140) #17	MGP_CAROLIEiJ_G0020139 #18	Tbc1d22a (MGP_CAROLIEiJ_G0020138) #19	Cerk (MGP_CAROLIEiJ_G0020137) #20	Gramd4 (MGP_CAROLIEiJ_G0020136) #21	Celsr1 (MGP_CAROLIEiJ_G0020135) #22	Trmu (MGP_CAROLIEiJ_G0020134) #23	Gtse1 (MGP_CAROLIEiJ_G0020133) #24	Ttc38 (MGP_CAROLIEiJ_G0020132) #25	Pkdrej (MGP_CAROLIEiJ_G0020131) #26	Cdpf1 (MGP_CAROLIEiJ_G0020130) #27	Ppara (MGP_CAROLIEiJ_G0020129) #28	MGP_CAROLIEiJ_G0020128 #29	7530416G11Rik (MGP_CAROLIEiJ_G0020127) #30	Atxn10 (MGP_CAROLIEiJ_G0020126) #31	Fbln1 (MGP_CAROLIEiJ_G0020125) #32	Ribc2 (MGP_CAROLIEiJ_G0020124) #33	Smc1b (MGP_CAROLIEiJ_G0020123) #34	Fam118a (MGP_CAROLIEiJ_G0020122) #35	Upk3a (MGP_CAROLIEiJ_G0020121) #36	5031439G07Rik (MGP_CAROLIEiJ_G0020120) #37
Rat	MODERN SPECIES	17	Mov10l1 (ENSRNOG00000031093) #9	Mlc1 (ENSRNOG00000032871) #10	Ttll8 (ENSRNOG00000032311) #11	Pim3 (ENSRNOG00000029698) #12	Creld2 (ENSRNOG00000004659) #13	Alg12 (ENSRNOG00000004591) #14	Zbed4 (ENSRNOG00000004588) #15	Brd1 (ENSRNOG00000004538) #16	Zdhhc25 (ENSRNOG00000046044) #17	Tafa5 (ENSRNOG00000049349) #18	AABR07058615.1 (ENSRNOG00000004457)	Tbc1d22a (ENSRNOG00000017057) #19	LOC108351584 (ENSRNOG00000069627)	Cerk (ENSRNOG00000017022) #20	Gramd4 (ENSRNOG00000016968) #21	Celsr1 (ENSRNOG00000021285) #22	Trmu (ENSRNOG00000016465) #23	Gtse1 (ENSRNOG00000016148) #24	Ttc38 (ENSRNOG00000015916) #25	Pkdrej (ENSRNOG00000029591) #26	Cdpf1 (ENSRNOG00000032846)	Ppara (ENSRNOG00000021463) #28	Wnt7b (ENSRNOG00000015750) #29	Atxn10 (ENSRNOG00000014637) #31	Fbln1 (ENSRNOG00000014137) #32	Ribc2 (ENSRNOG00000033502) #33	Smc1b (ENSRNOG00000032570) #34	Fam118a (ENSRNOG00000013764) #35	Upk3a (ENSRNOG00000013593) #36	RGD1304694 (ENSRNOG00000031269) #37	Nup50 (ENSRNOG00000013423)
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348.k
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348.k
Chinese hamster chok1gshd	MODERN SPECIES	1	Trabd (ENSCGRG00001022719) #7	Panx2 (ENSCGRG00001022483) #8	Mov10l1 (ENSCGRG00001007137) #9	Mlc1 (ENSCGRG00001022695) #10	Ttll8 (ENSCGRG00001022745) #11	Pim3 (ENSCGRG00001023550) #12	Creld2 (ENSCGRG00001023675) #13	Alg12 (ENSCGRG00001003548) #14	Zbed4 (ENSCGRG00001010059) #15	Brd1 (ENSCGRG00001020920) #16	Zdhhc25 (ENSCGRG00001009222) #17	Tafa5 (ENSCGRG00001021779) #18	Tbc1d22a (ENSCGRG00001022994) #19	Cerk (ENSCGRG00001022804) #20	Gramd4 (ENSCGRG00001002293) #21	Celsr1 (ENSCGRG00001005384) #22	Trmu (ENSCGRG00001001739) #23	Gtse1 (ENSCGRG00001022761) #24	Ttc38 (ENSCGRG00001014164) #25	Pkdrej (ENSCGRG00001009914) #26	Cdpf1 (ENSCGRG00001010508) #27	Ppara (ENSCGRG00001020975) #28	Wnt7b (ENSCGRG00001020677) #29	Atxn10 (ENSCGRG00001023469) #31	Fbln1 (ENSCGRG00001022892) #32	Ribc2 (ENSCGRG00001022586) #33	Smc1b (ENSCGRG00001023091) #34	Fam118a (ENSCGRG00001020480) #35	Upk3a (ENSCGRG00001020241) #36	5031439G07Rik (ENSCGRG00001002605) #37	Nup50 (ENSCGRG00001022781)
Golden Hamster	MODERN SPECIES	626	Panx2 (ENSMAUG00000022221) #8	Mov10l1 (ENSMAUG00000003667) #9	Mlc1 (ENSMAUG00000001307) #10	Ttll8 (ENSMAUG00000022281) #11	Pim3 (ENSMAUG00000021972) #12	Creld2 (ENSMAUG00000021784) #13	Alg12 (ENSMAUG00000022186) #14	Zbed4 (ENSMAUG00000008363) #15	Brd1 (ENSMAUG00000021540) #16	ENSMAUG00000009686	ENSMAUG00000010433	Tafa5 (ENSMAUG00000021829) #18	Tbc1d22a (ENSMAUG00000021794) #19	ENSMAUG00000020879 #20	Gramd4 (ENSMAUG00000022085) #21	Celsr1 (ENSMAUG00000004920) #22	Trmu (ENSMAUG00000022282) #23	Gtse1 (ENSMAUG00000020631) #24	Ttc38 (ENSMAUG00000020404) #25	Cdpf1 (ENSMAUG00000020896) #27	Ppara (ENSMAUG00000005745) #28	Wnt7b (ENSMAUG00000010041) #29	Atxn10 (ENSMAUG00000008337) #31	Fbln1 (ENSMAUG00000021664) #32	Ribc2 (ENSMAUG00000020705) #33	Smc1b (ENSMAUG00000021949) #34	Fam118a (ENSMAUG00000004197) #35	Upk3a (ENSMAUG00000003539) #36	5031439G07Rik (ENSMAUG00000021935) #37	Nup50 (ENSMAUG00000009484)	Phf21b (ENSMAUG00000001834)
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00390000005508.a	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348.k
Northern American deer mouse	MODERN SPECIES	12	Mlc1 (ENSPEMG00000002209) #10	Ttll8 (ENSPEMG00000012821) #11	Pim3 (ENSPEMG00000023829) #12	Creld2 (ENSPEMG00000024046) #13	Alg12 (ENSPEMG00000023141) #14	Zbed4 (ENSPEMG00000024147) #15	Brd1 (ENSPEMG00000022320) #16	Zdhhc25 (ENSPEMG00000020651) #17	ENSPEMG00000028704	Tafa5 (ENSPEMG00000028342) #18	ENSPEMG00000027034	ENSPEMG00000028211	Tbc1d22a (ENSPEMG00000019370) #19	Cerk (ENSPEMG00000019314) #20	Gramd4 (ENSPEMG00000019289) #21	Celsr1 (ENSPEMG00000019677) #22	Trmu (ENSPEMG00000014007) #23	Gtse1 (ENSPEMG00000016016) #24	ENSPEMG00000028187 #25	ENSPEMG00000029006 #25	ENSPEMG00000027591 #25	Pkdrej (ENSPEMG00000007913) #26	Cdpf1 (ENSPEMG00000026537) #27	Ppara (ENSPEMG00000010486) #28	Wnt7b (ENSPEMG00000028212) #29	Atxn10 (ENSPEMG00000023620) #31	ENSPEMG00000029850	Fbln1 (ENSPEMG00000022785) #32	Ribc2 (ENSPEMG00000002313) #33	Smc1b (ENSPEMG00000013406) #34	Fam118a (ENSPEMG00000007368) #35
Prairie vole	MODERN SPECIES	2	Selenoo (ENSMOCG00000010528)	Trabd (ENSMOCG00000013339) #7	Panx2 (ENSMOCG00000008412) #8	Mov10l1 (ENSMOCG00000020419) #9	Mlc1 (ENSMOCG00000019042) #10	Ttll8 (ENSMOCG00000012706) #11	Pim3 (ENSMOCG00000018665) #12	Creld2 (ENSMOCG00000004087) #13	Alg12 (ENSMOCG00000011524) #14	Zbed4 (ENSMOCG00000001589) #15	Brd1 (ENSMOCG00000010094) #16	Tafa5 (ENSMOCG00000021174) #18	Tbc1d22a (ENSMOCG00000007696) #19	Cerk (ENSMOCG00000022804) #20	Gramd4 (ENSMOCG00000013829) #21	Celsr1 (ENSMOCG00000023039) #22	Trmu (ENSMOCG00000014641) #23	Gtse1 (ENSMOCG00000010786) #24	Ttc38 (ENSMOCG00000020659) #25	ENSMOCG00000018002	Cdpf1 (ENSMOCG00000000505) #27	Ppara (ENSMOCG00000014657) #28	Wnt7b (ENSMOCG00000015616) #29	Atxn10 (ENSMOCG00000020354) #31	Fbln1 (ENSMOCG00000008791) #32	Ribc2 (ENSMOCG00000016744) #33	Smc1b (ENSMOCG00000005714) #34	Fam118a (ENSMOCG00000017963) #35	Upk3a (ENSMOCG00000001356) #36	5031439G07Rik (ENSMOCG00000004477) #37	Nup50 (ENSMOCG00000004470)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1277																Celsr1 (ENSNGAG00000017582) #22	Trmu (ENSNGAG00000005132) #23	Gtse1 (ENSNGAG00000013097) #24	ENSNGAG00000001894 #25	ENSNGAG00000018357 #25	Cdpf1 (ENSNGAG00000000609) #27	Ppara (ENSNGAG00000004603) #28	Wnt7b (ENSNGAG00000012674) #29	Atxn10 (ENSNGAG00000016854) #31	Fbln1 (ENSNGAG00000002804) #32	Ribc2 (ENSNGAG00000015234) #33	Smc1b (ENSNGAG00000016990) #34	ENSNGAG00000001946	Fam118a (ENSNGAG00000012822) #35	Upk3a (ENSNGAG00000015997) #36	5031439G07Rik (ENSNGAG00000000395) #37
Lesser Egyptian jerboa	MODERN SPECIES	42	Trabd (ENSJJAG00000002026) #7	Panx2 (ENSJJAG00000022586) #8	Mov10l1 (ENSJJAG00000007026) #9	Mlc1 (ENSJJAG00000017316) #10	Ttll8 (ENSJJAG00000011488) #11	Pim3 (ENSJJAG00000023071) #12	Creld2 (ENSJJAG00000011752) #13	Alg12 (ENSJJAG00000021461) #14	Brd1 (ENSJJAG00000021894) #16	ENSJJAG00000020987	ENSJJAG00000022456	Tafa5 (ENSJJAG00000022146) #18	Tbc1d22a (ENSJJAG00000022725) #19	Cerk (ENSJJAG00000022131) #20	Gramd4 (ENSJJAG00000022516) #21	Celsr1 (ENSJJAG00000023159) #22	Trmu (ENSJJAG00000000667) #23	Gtse1 (ENSJJAG00000020084) #24	Ttc38 (ENSJJAG00000021274) #25	Pkdrej (ENSJJAG00000021330) #26	Cdpf1 (ENSJJAG00000020066) #27	Ppara (ENSJJAG00000020917) #28	Wnt7b (ENSJJAG00000019892) #29	Atxn10 (ENSJJAG00000021073) #31	Fbln1 (ENSJJAG00000022397) #32	Ribc2 (ENSJJAG00000021212) #33	Smc1b (ENSJJAG00000021620) #34	Fam118a (ENSJJAG00000020019) #35	Upk3a (ENSJJAG00000019467) #36	5031439G07Rik (ENSJJAG00000020167) #37	ENSJJAG00000019542
Kangaroo rat	MODERN SPECIES	406	Tubgcp6 (ENSDORG00000013091)	Selenoo (ENSDORG00000013088)	Trabd (ENSDORG00000013086) #7	Panx2 (ENSDORG00000006971) #8	Mov10l1 (ENSDORG00000013249) #9	Mlc1 (ENSDORG00000006663) #10	Ttll8 (ENSDORG00000006661) #11	Pim3 (ENSDORG00000015208) #12	Creld2 (ENSDORG00000015205) #13	Alg12 (ENSDORG00000015203) #14	Zbed4 (ENSDORG00000024848) #15	Brd1 (ENSDORG00000008368) #16	Tbc1d22a (ENSDORG00000000556) #19	Cerk (ENSDORG00000002801) #20	Gramd4 (ENSDORG00000014025) #21	Celsr1 (ENSDORG00000007456) #22	Trmu (ENSDORG00000007455) #23	Gtse1 (ENSDORG00000007454) #24	Ttc38 (ENSDORG00000005113) #25	Pkdrej (ENSDORG00000023983) #26	Cdpf1 (ENSDORG00000023514) #27	Ppara (ENSDORG00000003547) #28	Wnt7b (ENSDORG00000028569) #29	Atxn10 (ENSDORG00000013914) #31	Fbln1 (ENSDORG00000009625) #32	Ribc2 (ENSDORG00000007629) #33	Smc1b (ENSDORG00000010366) #34	Fam118a (ENSDORG00000010365) #35	5031439G07Rik (ENSDORG00000009447) #37	ENSDORG00000009446
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00940000168034	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00940000153972.C #8	ENSGT00940000160150.b #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00940000168034	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348
Marmotini	ANCESTRAL SPECIES	4	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150.b #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348
Marmotini_b	ANCESTRAL SPECIES	60	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150.b #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000165505 #17	ENSGT00940000160682.b #18	ENSGT00940000159840 #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348
Arctic ground squirrel	MODERN SPECIES	136												TBC1D22A (ENSUPAG00010000801) #19	ENSUPAG00010000822	CERK (ENSUPAG00010000837) #20	GRAMD4 (ENSUPAG00010000878) #21	CELSR1 (ENSUPAG00010000911) #22	TRMU (ENSUPAG00010000993) #23	GTSE1 (ENSUPAG00010001015) #24	TTC38 (ENSUPAG00010001135) #25	PKDREJ (ENSUPAG00010001142) #26	ENSUPAG00010001152 #27	PPARA (ENSUPAG00010001194) #28	WNT7B (ENSUPAG00010001236) #29	ATXN10 (ENSUPAG00010001308) #31	ENSUPAG00010001323	FBLN1 (ENSUPAG00010001341) #32	RIBC2 (ENSUPAG00010001366) #33	SMC1B (ENSUPAG00010001387) #34	FAM118A (ENSUPAG00010001448) #35	UPK3A (ENSUPAG00010001467) #36	KIAA0930 (ENSUPAG00010001482) #37
Squirrel	MODERN SPECIES	229	PANX2 (ENSSTOG00000022957) #8	MOV10L1 (ENSSTOG00000003747) #9	MLC1 (ENSSTOG00000003710) #10	TTLL8 (ENSSTOG00000007069) #11	PIM3 (ENSSTOG00000028287) #12	CRELD2 (ENSSTOG00000008552) #13	ENSSTOG00000008531 #14	ZBED4 (ENSSTOG00000023379) #15	BRD1 (ENSSTOG00000009122) #16	ENSSTOG00000028720 #17	TAFA5 (ENSSTOG00000019476) #18	TBC1D22A (ENSSTOG00000005557) #19	ENSSTOG00000025303	CERK (ENSSTOG00000021842) #20	GRAMD4 (ENSSTOG00000026193) #21	CELSR1 (ENSSTOG00000010999) #22	TRMU (ENSSTOG00000010993) #23	GTSE1 (ENSSTOG00000010979) #24	TTC38 (ENSSTOG00000008111) #25	PKDREJ (ENSSTOG00000023361) #26	CDPF1 (ENSSTOG00000010961) #27	PPARA (ENSSTOG00000010957) #28	WNT7B (ENSSTOG00000024359) #29	ATXN10 (ENSSTOG00000032882) #31	FBLN1 (ENSSTOG00000029256) #32	RIBC2 (ENSSTOG00000020773) #33	SMC1B (ENSSTOG00000001181) #34	FAM118A (ENSSTOG00000001173) #35	UPK3A (ENSSTOG00000013944) #36	KIAA0930 (ENSSTOG00000028637) #37	NUP50 (ENSSTOG00000025656)
Alpin marmot	MODERN SPECIES	76											ENSMMMG00000022752	TAFA5 (ENSMMMG00000022767) #18	TBC1D22A (ENSMMMG00000022775) #19	CERK (ENSMMMG00000022787) #20	GRAMD4 (ENSMMMG00000022791) #21	CELSR1 (ENSMMMG00000022800) #22	TRMU (ENSMMMG00000022837) #23	GTSE1 (ENSMMMG00000022842) #24	TTC38 (ENSMMMG00000022854) #25	PKDREJ (ENSMMMG00000022862) #26	CDPF1 (ENSMMMG00000022867) #27	PPARA (ENSMMMG00000022880) #28	ENSMMMG00000022892	WNT7B (ENSMMMG00000022894) #29	ATXN10 (ENSMMMG00000022899) #31	ENSMMMG00000022900	FBLN1 (ENSMMMG00000022901) #32	RIBC2 (ENSMMMG00000022915) #33	SMC1B (ENSMMMG00000022923) #34	FAM118A (ENSMMMG00000022934) #35	UPK3A (ENSMMMG00000022940) #36
Eurasian red squirrel	MODERN SPECIES	14	ENSSVLG00005008197 #9	MLC1 (ENSSVLG00005008063) #10	TTLL8 (ENSSVLG00005007883) #11	PIM3 (ENSSVLG00005007815) #12	CRELD2 (ENSSVLG00005007771) #13	ALG12 (ENSSVLG00005007721) #14	ZBED4 (ENSSVLG00005007699) #15	BRD1 (ENSSVLG00005007645) #16	ENSSVLG00005007598	ENSSVLG00005007576	TAFA5 (ENSSVLG00005007520) #18	TBC1D22A (ENSSVLG00005007405) #19	CERK (ENSSVLG00005007251) #20	ENSSVLG00005007199	ENSSVLG00005007139 #21	CELSR1 (ENSSVLG00005007014) #22	TRMU (ENSSVLG00005006961) #23	GTSE1 (ENSSVLG00005006916) #24	TTC38 (ENSSVLG00005006858) #25	PKDREJ (ENSSVLG00005006816) #26	CDPF1 (ENSSVLG00005006772) #27	PPARA (ENSSVLG00005006748) #28	WNT7B (ENSSVLG00005006679) #29	ATXN10 (ENSSVLG00005006578) #31	FBLN1 (ENSSVLG00005006308) #32	RIBC2 (ENSSVLG00005006192) #33	SMC1B (ENSSVLG00005005919) #34	ENSSVLG00005005861 #35	ENSSVLG00005005796 #36	ENSSVLG00005005734 #36	KIAA0930 (ENSSVLG00005005653) #37
Hystricomorpha	ANCESTRAL SPECIES	13	ENSGT00390000005508.a	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b.d #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000160682.b #18	ENSGT00940000159840.f #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348
Hystricomorpha_a	ANCESTRAL SPECIES	6	ENSGT00390000005508.a	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b.d #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000160682.b #18	ENSGT00940000159840.f #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348
Hystricomorpha_b	ANCESTRAL SPECIES	2	ENSGT00390000005508.a	ENSGT00390000009067 #7	ENSGT00940000153972.C #8	ENSGT00940000160150 #9	ENSGT00390000015442 #10	ENSGT00940000162265 #11	ENSGT00940000153394.c.b.d #12	ENSGT00940000160071 #13	ENSGT00950000183090.B #14	ENSGT00940000161365 #15	ENSGT00940000157236 #16	ENSGT00940000160682.b #18	ENSGT00940000159840.f #19	ENSGT00940000156976 #20	ENSGT00390000010968 #21	ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28	ENSGT00940000158861.A #29	ENSGT00390000010377 #31	ENSGT00940000156642 #32	ENSGT00390000010825.b #33	ENSGT00940000157633 #34	ENSGT00390000010215.A #35	ENSGT00940000153392.b.a #36	ENSGT00390000004190 #37	ENSGT00440000035348
Long-tailed chinchilla	MODERN SPECIES	120	SELENOO (ENSCLAG00000016415)	TRABD (ENSCLAG00000017256) #7	PANX2 (ENSCLAG00000017242) #8	MOV10L1 (ENSCLAG00000017288) #9	MLC1 (ENSCLAG00000017013) #10	TTLL8 (ENSCLAG00000015999) #11	PIM3 (ENSCLAG00000016870) #12	CRELD2 (ENSCLAG00000017304) #13	ALG12 (ENSCLAG00000016932) #14	ZBED4 (ENSCLAG00000017234) #15	BRD1 (ENSCLAG00000017112) #16	TAFA5 (ENSCLAG00000017180) #18	TBC1D22A (ENSCLAG00000015959) #19	CERK (ENSCLAG00000016678) #20	GRAMD4 (ENSCLAG00000017096) #21	CELSR1 (ENSCLAG00000016719) #22	TRMU (ENSCLAG00000017269) #23	GTSE1 (ENSCLAG00000017237) #24	TTC38 (ENSCLAG00000017023) #25	PKDREJ (ENSCLAG00000017056) #26	CDPF1 (ENSCLAG00000017222) #27	PPARA (ENSCLAG00000017301) #28	WNT7B (ENSCLAG00000017076) #29	ATXN10 (ENSCLAG00000016859) #31	FBLN1 (ENSCLAG00000016951) #32	RIBC2 (ENSCLAG00000017045) #33	SMC1B (ENSCLAG00000016971) #34	FAM118A (ENSCLAG00000016872) #35	UPK3A (ENSCLAG00000016597) #36	KIAA0930 (ENSCLAG00000016457) #37	ENSCLAG00000017084
Degu	MODERN SPECIES	194	TUBGCP6 (ENSODEG00000015845)	SELENOO (ENSODEG00000016393)	TRABD (ENSODEG00000015551) #7	PANX2 (ENSODEG00000015716) #8	MOV10L1 (ENSODEG00000015326) #9	MLC1 (ENSODEG00000015862) #10	PIM3 (ENSODEG00000015238) #12	CRELD2 (ENSODEG00000015949) #13	ALG12 (ENSODEG00000015815) #14	ZBED4 (ENSODEG00000020394) #15	BRD1 (ENSODEG00000015579) #16	TAFA5 (ENSODEG00000015536) #18	TBC1D22A (ENSODEG00000015390) #19	CERK (ENSODEG00000016133) #20	GRAMD4 (ENSODEG00000014781) #21	CELSR1 (ENSODEG00000015461) #22	TRMU (ENSODEG00000014745) #23	ENSODEG00000015837 #24	TTC38 (ENSODEG00000014912) #25	PKDREJ (ENSODEG00000015429) #26	CDPF1 (ENSODEG00000016735) #27	PPARA (ENSODEG00000014591) #28	WNT7B (ENSODEG00000016370) #29	ATXN10 (ENSODEG00000014678) #31	FBLN1 (ENSODEG00000014780) #32	RIBC2 (ENSODEG00000016095) #33	SMC1B (ENSODEG00000014594) #34	FAM118A (ENSODEG00000015410) #35	UPK3A (ENSODEG00000014940) #36	KIAA0930 (ENSODEG00000015023) #37	NUP50 (ENSODEG00000014719)
Guinea pig	MODERN SPECIES	160												TAFA5 (ENSCPOG00000032237) #18	TBC1D22A (ENSCPOG00000006220) #19	CERK (ENSCPOG00000025691) #20	GRAMD4 (ENSCPOG00000012881) #21	CELSR1 (ENSCPOG00000013977) #22	TRMU (ENSCPOG00000020780) #23	GTSE1 (ENSCPOG00000006055) #24	TTC38 (ENSCPOG00000006041) #25	PKDREJ (ENSCPOG00000022266) #26	CDPF1 (ENSCPOG00000026736) #27	PPARA (ENSCPOG00000001483) #28	WNT7B (ENSCPOG00000026817) #29
Naked mole-rat female	MODERN SPECIES	24									ENSHGLG00000035438	ENSHGLG00000017848	ENSHGLG00000042716	ENSHGLG00000044258 #18	ENSHGLG00000050709 #19	ENSHGLG00000041713 #19	CERK (ENSHGLG00000014012) #20	ENSHGLG00000041173 #22	TRMU (ENSHGLG00000009278) #23	TTC38 (ENSHGLG00000047462) #25	CDPF1 (ENSHGLG00000049236) #27	PPARA (ENSHGLG00000011724) #28	WNT7B (ENSHGLG00000048718) #29	ATXN10 (ENSHGLG00000017700) #31	RIBC2 (ENSHGLG00000037390) #33	SMC1B (ENSHGLG00000004900) #34	FAM118A (ENSHGLG00000006413) #35	UPK3A (ENSHGLG00000041654) #36	KIAA0930 (ENSHGLG00000010540) #37	NUP50 (ENSHGLG00000009303)	PHF21B (ENSHGLG00000011301)	ARHGAP8 (ENSHGLG00000015769)	PRR5 (ENSHGLG00000040192)
Lagomorpha	ANCESTRAL SPECIES	299																ENSGT00940000159839 #22	ENSGT00390000014323 #23	ENSGT00940000154189.B #24	ENSGT00390000002669 #25	ENSGT00940000162080 #26	ENSGT00390000007925 #27	ENSGT00940000157097 #28
Pika	MODERN SPECIES	3655																ENSOPRG00000010896 #22
Rabbit	MODERN SPECIES	661																ENSOCUG00000024142 #22	ENSOCUG00000035208	TRMU (ENSOCUG00000003664) #23	ENSOCUG00000031833	PKDREJ (ENSOCUG00000009356) #26	GTSE1 (ENSOCUG00000000377) #24	TTC38 (ENSOCUG00000000371) #25	ENSOCUG00000029212 #25	CDPF1 (ENSOCUG00000016754) #27	PPARA (ENSOCUG00000009353) #28