Sarcopterygii	ANCESTRAL SPECIES	374							ENSGT00940000158353 #32	ENSGT00390000006450	ENSGT00940000163239 #30	ENSGT00940000153680.b #27	ENSGT00440000038181 #25	ENSGT00950000182944.A #24	ENSGT00390000016048 #26	ENSGT00940000175321	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b #22
Tetrapoda	ANCESTRAL SPECIES	179														ENSGT00940000175321	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b #22	ENSGT00940000154868.b	ENSGT01080000257336.a.c.a #23	ENSGT00390000016048 #26	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00940000153680.b #27	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000158353 #32	ENSGT00940000161241 #29
Amniota	ANCESTRAL SPECIES	102														ENSGT00940000175321	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32
Mammalia	ANCESTRAL SPECIES	128															ENSGT00960000190186	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32
Theria	ANCESTRAL SPECIES	15	ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35	ENSGT00510000048072 #36
Eutheria	ANCESTRAL SPECIES	3	ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00940000163113	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00940000163113	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00910000147753
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.d	ENSGT00940000169601	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00910000147753	ENSGT00940000158967 #34
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.d	ENSGT00940000169601	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Glires	ANCESTRAL SPECIES	1	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.d	ENSGT00940000169601	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.d	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.d	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.d	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Marmotini	ANCESTRAL SPECIES	28	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.d	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00390000009895.i.b.a #28	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32
Alpin marmot	MODERN SPECIES	3	B3GNT6 (ENSMMMG00000009247) #7	ACER3 (ENSMMMG00000009260) #8	TSKU (ENSMMMG00000009316) #9	ENSMMMG00000009326 #10	LRRC32 (ENSMMMG00000009408) #11	EMSY (ENSMMMG00000009455) #12	GVQW3 (ENSMMMG00000009582) #13	WNT11 (ENSMMMG00000009631) #14	UVRAG (ENSMMMG00000009669) #15	DGAT2 (ENSMMMG00000009694) #16	MOGAT2 (ENSMMMG00000009708) #17	MAP6 (ENSMMMG00000009732) #18	SERPINH1 (ENSMMMG00000009745) #19	GDPD5 (ENSMMMG00000009761) #20	RPS3 (ENSMMMG00000009823) #21	ARRB1 (ENSMMMG00000009891) #22	SLCO2B1 (ENSMMMG00000010020) #23	NEU3 (ENSMMMG00000010144) #24	SPCS2 (ENSMMMG00000010185) #25	XRRA1 (ENSMMMG00000010212) #26	RNF169 (ENSMMMG00000010273) #27	ENSMMMG00000010292 #28	CHRDL2 (ENSMMMG00000010297) #29	ENSMMMG00000010334 #30	KCNE3 (ENSMMMG00000010356) #31	PGM2L1 (ENSMMMG00000010377) #32	ENSMMMG00000010391 #33	P4HA3 (ENSMMMG00000010398) #34	PPME1 (ENSMMMG00000010421) #35	C2CD3 (ENSMMMG00000010449) #36	UCP3 (ENSMMMG00000010518) #37
Marmotini_b	ANCESTRAL SPECIES	13	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.d	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00390000009895.i.b.a #28	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Arctic ground squirrel	MODERN SPECIES	48	ENSUPAG00010013002	EMSY (ENSUPAG00010013019) #12	GVQW3 (ENSUPAG00010013303) #13	ENSUPAG00010013311	THAP12 (ENSUPAG00010013320)	WNT11 (ENSUPAG00010013326) #14	UVRAG (ENSUPAG00010013333) #15	DGAT2 (ENSUPAG00010013352) #16	MOGAT2 (ENSUPAG00010013360) #17	ENSUPAG00010013378 #18	ENSUPAG00010013392	SERPINH1 (ENSUPAG00010013397) #19	GDPD5 (ENSUPAG00010013418) #20	KLHL35 (ENSUPAG00010013466)	RPS3 (ENSUPAG00010013480) #21	ARRB1 (ENSUPAG00010013533) #22	TPBGL (ENSUPAG00010013579)	SLCO2B1 (ENSUPAG00010013587) #23	OR2AT4 (ENSUPAG00010013744)	ENSUPAG00010013749	ENSUPAG00010013754 #25	XRRA1 (ENSUPAG00010013791) #26	RNF169 (ENSUPAG00010013817) #27	ENSUPAG00010013830 #28	CHRDL2 (ENSUPAG00010013837) #29
Squirrel	MODERN SPECIES	98	TSKU (ENSSTOG00000021957) #9	ENSSTOG00000023620 #10	LRRC32 (ENSSTOG00000007128) #11	ENSSTOG00000027244	EMSY (ENSSTOG00000001193) #12	WNT11 (ENSSTOG00000029064) #14	UVRAG (ENSSTOG00000016316) #15	DGAT2 (ENSSTOG00000012018) #16	MOGAT2 (ENSSTOG00000012010) #17	ENSSTOG00000024696	ENSSTOG00000015949 #18	SERPINH1 (ENSSTOG00000027738) #19	GDPD5 (ENSSTOG00000004596) #20	KLHL35 (ENSSTOG00000027931)	ENSSTOG00000028813 ##21	ARRB1 (ENSSTOG00000004545) #22	TPBGL (ENSSTOG00000027127)	SLCO2B1 (ENSSTOG00000012655) #23	OR2AT4 (ENSSTOG00000030885)	ENSSTOG00000020894	NEU3 (ENSSTOG00000012649) #24	SPCS2 (ENSSTOG00000012647) #25	XRRA1 (ENSSTOG00000000466) #26	ENSSTOG00000034261 #28	RNF169 (ENSSTOG00000000462) #27	CHRDL2 (ENSSTOG00000000457) #29	POLD3 (ENSSTOG00000000455)	LIPT2 (ENSSTOG00000026720)	KCNE3 (ENSSTOG00000012391) #31	PGM2L1 (ENSSTOG00000012379) #32	P4HA3 (ENSSTOG00000007908) #34
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005023846	ENSSVLG00005023498 #10	LRRC32 (ENSSVLG00005023371) #11	EMSY (ENSSVLG00005023093) #12	GVQW3 (ENSSVLG00005022970) #13	THAP12 (ENSSVLG00005022917)	WNT11 (ENSSVLG00005022863) #14	UVRAG (ENSSVLG00005022785) #15	DGAT2 (ENSSVLG00005022688) #16	MOGAT2 (ENSSVLG00005022595) #17	MAP6 (ENSSVLG00005022557) #18	SERPINH1 (ENSSVLG00005022497) #19	GDPD5 (ENSSVLG00005022336) #20	KLHL35 (ENSSVLG00005022223)	ENSSVLG00005022121 #21	ENSSVLG00005021867 #22	TPBGL (ENSSVLG00005021827)	SLCO2B1 (ENSSVLG00005021400) #23	OR2AT4 (ENSSVLG00005021320)	ENSSVLG00005021281	ENSSVLG00005021188	ENSSVLG00005021124 #25	XRRA1 (ENSSVLG00005020739) #26	ENSSVLG00005020360	CHRDL2 (ENSSVLG00005020306) #29	ENSSVLG00005020262	ENSSVLG00005020246	ENSSVLG00005020230	ENSSVLG00005020086	ENSSVLG00005020056	LIPT2 (ENSSVLG00005020012)
Eurasian red squirrel	MODERN SPECIES	3	SEPHS1 (ENSSVLG00005018549)	PHYH (ENSSVLG00005018627)	UCMA (ENSSVLG00005018738)	MCM10 (ENSSVLG00005018843)	OPTN (ENSSVLG00005019036)	ENSSVLG00005019101	ENSSVLG00005019155	ENSSVLG00005019213	ENSSVLG00005019253	ENSSVLG00005019294	ENSSVLG00005019362	ENSSVLG00005019410	ENSSVLG00005019437	ENSSVLG00005019518	FMN2 (ENSSVLG00005019769)	ENSSVLG00005020015 #22	GREM2 (ENSSVLG00005020053)	ENSSVLG00005020073	ENSSVLG00005020122	ENSSVLG00005020137	ENSSVLG00005020174	RGS7 (ENSSVLG00005020300)	FH (ENSSVLG00005020886)	KMO (ENSSVLG00005021004)	OPN3 (ENSSVLG00005021384)	WDR64 (ENSSVLG00005021468)	EXO1 (ENSSVLG00005021837)	ENSSVLG00005022002	BECN2 (ENSSVLG00005022043)	MAP1LC3C (ENSSVLG00005022067)	PLD5 (ENSSVLG00005022151)
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Hystricomorpha_a	ANCESTRAL SPECIES	10	ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Hystricomorpha_b	ANCESTRAL SPECIES	5	ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Long-tailed chinchilla	MODERN SPECIES	121	ACER3 (ENSCLAG00000014899) #8	ENSCLAG00000015013	TSKU (ENSCLAG00000016143) #9	ENSCLAG00000014932 #10	LRRC32 (ENSCLAG00000016535) #11	EMSY (ENSCLAG00000015699) #12	THAP12 (ENSCLAG00000014847)	WNT11 (ENSCLAG00000014333) #14	UVRAG (ENSCLAG00000016075) #15	DGAT2 (ENSCLAG00000015138) #16	ENSCLAG00000015204 #18	SERPINH1 (ENSCLAG00000013718) #19	GDPD5 (ENSCLAG00000015415) #20	KLHL35 (ENSCLAG00000015297)	RPS3 (ENSCLAG00000013819) #21	ARRB1 (ENSCLAG00000014486) #22	TPBGL (ENSCLAG00000016335)	SLCO2B1 (ENSCLAG00000013902) #23	NEU3 (ENSCLAG00000015476) #24	SPCS2 (ENSCLAG00000016410) #25	XRRA1 (ENSCLAG00000014397) #26	RNF169 (ENSCLAG00000015974) #27	CHRDL2 (ENSCLAG00000016930) #29	ENSCLAG00000014255 #30	LIPT2 (ENSCLAG00000016419)	KCNE3 (ENSCLAG00000016222) #31	PGM2L1 (ENSCLAG00000015758) #32	P4HA3 (ENSCLAG00000016260) #34	PPME1 (ENSCLAG00000016482) #35	C2CD3 (ENSCLAG00000015900) #36	UCP3 (ENSCLAG00000016512) #37
Degu	MODERN SPECIES	90		TSKU (ENSODEG00000019557) #9	ENSODEG00000008288 #10	LRRC32 (ENSODEG00000008307) #11	EMSY (ENSODEG00000003710) #12	ENSODEG00000003873	WNT11 (ENSODEG00000003887) #14	UVRAG (ENSODEG00000004147) #15	DGAT2 (ENSODEG00000004293) #16	MOGAT2 (ENSODEG00000004302) #17	ENSODEG00000004327 #18	SERPINH1 (ENSODEG00000004317) #19	ENSODEG00000004513	KLHL35 (ENSODEG00000004522)	ENSODEG00000004564 #21	ARRB1 (ENSODEG00000004633) #22	TPBGL (ENSODEG00000004759)	SLCO2B1 (ENSODEG00000004779) #23	OR2AT4 (ENSODEG00000004509)	ENSODEG00000004518	ENSODEG00000019165	NEU3 (ENSODEG00000004614) #24	SPCS2 (ENSODEG00000004684) #25	XRRA1 (ENSODEG00000004727) #26	RNF169 (ENSODEG00000004854) #27	CHRDL2 (ENSODEG00000004877) #29	POLD3 (ENSODEG00000004735)	ENSODEG00000004965	ENSODEG00000019096	LIPT2 (ENSODEG00000004972)	KCNE3 (ENSODEG00000019113) #31
Guinea pig	MODERN SPECIES	103											ENSCPOG00000031687 #18	SERPINH1 (ENSCPOG00000022994) #19	GDPD5 (ENSCPOG00000010246) #20	KLHL35 (ENSCPOG00000010232)	RPS3 (ENSCPOG00000004665) #21	ARRB1 (ENSCPOG00000000209) #22	TPBGL (ENSCPOG00000015056)	SLCO2B1 (ENSCPOG00000015052) #23	OR2AT4 (ENSCPOG00000012056)	NEU3 (ENSCPOG00000006422) #24	SPCS2 (ENSCPOG00000033774) #25	XRRA1 (ENSCPOG00000007269) #26	RNF169 (ENSCPOG00000025687) #27	CHRDL2 (ENSCPOG00000007071) #29	ENSCPOG00000007066	LIPT2 (ENSCPOG00000025073)	KCNE3 (ENSCPOG00000033408) #31	PGM2L1 (ENSCPOG00000014068) #32	P4HA3 (ENSCPOG00000003601) #34	PPME1 (ENSCPOG00000003599) #35	C2CD3 (ENSCPOG00000010703) #36
Naked mole-rat female	MODERN SPECIES	24	LRRC32 (ENSHGLG00000019111) #11	EMSY (ENSHGLG00000006473) #12	GVQW3 (ENSHGLG00000047967) #13	THAP12 (ENSHGLG00000043567)	WNT11 (ENSHGLG00000010701) #14	UVRAG (ENSHGLG00000003077) #15	ENSHGLG00000039982	DGAT2 (ENSHGLG00000003971) #16	MOGAT2 (ENSHGLG00000005337) #17	ENSHGLG00000043050	MAP6 (ENSHGLG00000005485) #18	SERPINH1 (ENSHGLG00000007288) #19	GDPD5 (ENSHGLG00000009912) #20	KLHL35 (ENSHGLG00000004947)	RPS3 (ENSHGLG00000019339) #21	ARRB1 (ENSHGLG00000015558) #22	TPBGL (ENSHGLG00000021318)	SLCO2B1 (ENSHGLG00000015264) #23	OR2AT4 (ENSHGLG00000049134)	ENSHGLG00000033098	ENSHGLG00000039039	ENSHGLG00000032512	NEU3 (ENSHGLG00000018397) #24	ENSHGLG00000042609	SPCS2 (ENSHGLG00000044953) #25	ENSHGLG00000004932 #26	ENSHGLG00000038136 #26	RNF169 (ENSHGLG00000047439) #27	CHRDL2 (ENSHGLG00000013117) #29	ENSHGLG00000021193	POLD3 (ENSHGLG00000012230)
Rodentia_B	ANCESTRAL SPECIES	33	ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Kangaroo rat	MODERN SPECIES	341	Myo7a (ENSDORG00000014955)	Capn5 (ENSDORG00000014952)	Tsku (ENSDORG00000005661) #9	ENSDORG00000028416 #10	Lrrc32 (ENSDORG00000027997) #11	Emsy (ENSDORG00000008129) #12	ENSDORG00000030214	Wnt11 (ENSDORG00000005892) #14	Uvrag (ENSDORG00000015912) #15	Dgat2 (ENSDORG00000015911) #16	ENSDORG00000025798 #18	ENSDORG00000002978 #19	ENSDORG00000002976	Klhl35 (ENSDORG00000002975)	Rps3 (ENSDORG00000002974) #21	Arrb1 (ENSDORG00000004398) #22	ENSDORG00000006523 #23	Or2at4 (ENSDORG00000023720)	Or2at1 (ENSDORG00000002748)	Neu3 (ENSDORG00000023952) #24	Spcs2 (ENSDORG00000009679) #25	Xrra1 (ENSDORG00000009675) #26	Rnf169 (ENSDORG00000009674) #27	Chrdl2 (ENSDORG00000005504) #29	ENSDORG00000008335 #30	Lipt2 (ENSDORG00000015519)	Kcne3 (ENSDORG00000028654) #31	Pgm2l1 (ENSDORG00000001675) #32	P4ha3 (ENSDORG00000011067) #34	Ppme1 (ENSDORG00000011061) #35	C2cd3 (ENSDORG00000011059) #36
Myomorpha	ANCESTRAL SPECIES	13	ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT01070000253969	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Muroidea	ANCESTRAL SPECIES	12	ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT01070000253969	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Muroidea_A	ANCESTRAL SPECIES		ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01070000253969	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877.d #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01070000253969	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Cricetinae	ANCESTRAL SPECIES	15	ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877.d #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049.g	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01070000253969	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Chinese hamster chok1gshd	MODERN SPECIES	101	ENSCGRG00001024060	Tsku (ENSCGRG00001012773) #9	Gucy2d (ENSCGRG00001012034) #10	Lrrc32 (ENSCGRG00001007026) #11	ENSCGRG00001019331 #12	Thap12 (ENSCGRG00001021774)	Wnt11 (ENSCGRG00001022788) #14	Uvrag (ENSCGRG00001006874) #15	Dgat2 (ENSCGRG00001020895) #16	Mogat2 (ENSCGRG00001004764) #17	Map6 (ENSCGRG00001012636) #18	Serpinh1 (ENSCGRG00001024167) #19	Gdpd5 (ENSCGRG00001018824) #20	Klhl35 (ENSCGRG00001005839)	ENSCGRG00001013667 #21	Arrb1 (ENSCGRG00001007148) #22	Tpbgl (ENSCGRG00001007068)	Slco2b1 (ENSCGRG00001015456) #23	Or2at4 (ENSCGRG00001009746)	ENSCGRG00001008790	ENSCGRG00001009618	Neu3 (ENSCGRG00001022920) #24	ENSCGRG00001018251 #25	Xrra1 (ENSCGRG00001021284) #26	Chrdl2 (ENSCGRG00001017085) #29	Pold3 (ENSCGRG00001024887)	Lipt2 (ENSCGRG00001003966)	Kcne3 (ENSCGRG00001006190) #31	Pgm2l1 (ENSCGRG00001022200) #32	P4ha3 (ENSCGRG00001020549) #34	Ppme1 (ENSCGRG00001006185) #35
Golden Hamster	MODERN SPECIES	660	Tsku (ENSMAUG00000014311) #9	Gucy2d (ENSMAUG00000010563) #10	ENSMAUG00000017794 #11	Emsy (ENSMAUG00000017757) #12	ENSMAUG00000013228	Thap12 (ENSMAUG00000000897)	Wnt11 (ENSMAUG00000008427) #14	Uvrag (ENSMAUG00000022039) #15	Dgat2 (ENSMAUG00000009895) #16	Mogat2 (ENSMAUG00000012718) #17	Map6 (ENSMAUG00000011744) #18	Serpinh1 (ENSMAUG00000019515) #19	ENSMAUG00000015100	Klhl35 (ENSMAUG00000021872)	ENSMAUG00000012031 #21	Arrb1 (ENSMAUG00000021854) #22	Tpbgl (ENSMAUG00000008440)	ENSMAUG00000017960 #23	Or2at1 (ENSMAUG00000001599)	Neu3 (ENSMAUG00000021349) #24	Spcs2 (ENSMAUG00000011785) #25	Xrra1 (ENSMAUG00000021020) #26	Rnf169 (ENSMAUG00000014501) #27	Chrdl2 (ENSMAUG00000017187) #29	ENSMAUG00000014499	Lipt2 (ENSMAUG00000019457)	Kcne3 (ENSMAUG00000011451) #31	Pgm2l1 (ENSMAUG00000017167) #32	P4ha3 (ENSMAUG00000018103) #34	Ppme1 (ENSMAUG00000010412) #35	C2cd3 (ENSMAUG00000002400) #36
Cricetidae_B	ANCESTRAL SPECIES	26	ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877.d #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01070000253969	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Northern American deer mouse	MODERN SPECIES		ENSPEMG00000028876 #10	ENSPEMG00000026314 #10	Lrrc32 (ENSPEMG00000024699) #11	Emsy (ENSPEMG00000023648) #12	Thap12 (ENSPEMG00000013204)	Wnt11 (ENSPEMG00000021569) #14	Uvrag (ENSPEMG00000028043) #15	Dgat2 (ENSPEMG00000021889) #16	Mogat2 (ENSPEMG00000023232) #17	Map6 (ENSPEMG00000007984) #18	Serpinh1 (ENSPEMG00000022342) #19	Gdpd5 (ENSPEMG00000021717) #20	Klhl35 (ENSPEMG00000022958)	Rps3 (ENSPEMG00000021741) #21	ENSPEMG00000027335	Arrb1 (ENSPEMG00000024170) #22	Slco2b1 (ENSPEMG00000022027) #23	Or2at4 (ENSPEMG00000023224)	Or2at1 (ENSPEMG00000001658)	Neu3 (ENSPEMG00000022579) #24	Spcs2 (ENSPEMG00000021621) #25	Xrra1 (ENSPEMG00000022936) #26	Rnf169 (ENSPEMG00000009722) #27	Chrdl2 (ENSPEMG00000000436) #29	Pold3 (ENSPEMG00000016686)	Lipt2 (ENSPEMG00000009699)	Kcne3 (ENSPEMG00000024743) #31	Pgm2l1 (ENSPEMG00000021465) #32	ENSPEMG00000021679	P4ha3 (ENSPEMG00000023743) #34	Ppme1 (ENSPEMG00000022717) #35
Prairie vole	MODERN SPECIES	9	Acer3 (ENSMOCG00000014380) #8	Tsku (ENSMOCG00000007489) #9	Gucy2d (ENSMOCG00000003117) #10	Lrrc32 (ENSMOCG00000017378) #11	Emsy (ENSMOCG00000008098) #12	Thap12 (ENSMOCG00000021908)	Wnt11 (ENSMOCG00000021029) #14	Uvrag (ENSMOCG00000016758) #15	Dgat2 (ENSMOCG00000012378) #16	Mogat2 (ENSMOCG00000007716) #17	Map6 (ENSMOCG00000021641) #18	Serpinh1 (ENSMOCG00000015514) #19	ENSMOCG00000014147	Klhl35 (ENSMOCG00000012414)	Rps3 (ENSMOCG00000007699) #21	Arrb1 (ENSMOCG00000013364) #22	Tpbgl (ENSMOCG00000009503)	Slco2b1 (ENSMOCG00000022164) #23	Or2at4 (ENSMOCG00000007737)	Or2at1 (ENSMOCG00000008347)	Neu3 (ENSMOCG00000015363) #24	Spcs2 (ENSMOCG00000013765) #25	Xrra1 (ENSMOCG00000008479) #26	Rnf169 (ENSMOCG00000005688) #27	Chrdl2 (ENSMOCG00000010273) #29	Pold3 (ENSMOCG00000018619)	Lipt2 (ENSMOCG00000017385)	Kcne3 (ENSMOCG00000003845) #31	Pgm2l1 (ENSMOCG00000003706) #32	P4ha3 (ENSMOCG00000019829) #34	Ppme1 (ENSMOCG00000008664) #35
Murinae	ANCESTRAL SPECIES		ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01070000253969	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Rat	DUPLICATION
Rat	MODERN SPECIES		Tsku (ENSRNOG00000027784) #9	Gucy2e (ENSRNOG00000015058) #10	Lrrc32 (ENSRNOG00000015310) #11	Emsy (ENSRNOG00000015560) #12	Thap12 (ENSRNOG00000053923)	Wnt11 (ENSRNOG00000015982) #14	RGD1561870 (ENSRNOG00000042782)	Uvrag (ENSRNOG00000016206) #15	Dgat2 (ENSRNOG00000016573) #16	Mogat2 (ENSRNOG00000027228) #17	Map6 (ENSRNOG00000027204) #18	Serpinh1 (ENSRNOG00000016831) #19	Gdpd5 (ENSRNOG00000036859) #20	Klhl35 (ENSRNOG00000017365)	Rps3 (ENSRNOG00000017418) ##21	Arrb1 (ENSRNOG00000030404) #22	Tpbgl (ENSRNOG00000017922)	Slco2b1 (ENSRNOG00000017976) #23	Olr35 (ENSRNOG00000030788)	Olr36 (ENSRNOG00000068594)	Neu3 (ENSRNOG00000018106) #24	Or2at1 (ENSRNOG00000018078)	AABR07004876.1 (ENSRNOG00000018083)	Spcs2 (ENSRNOG00000018164) #25	Xrra1 (ENSRNOG00000026503) #26	Rnf169 (ENSRNOG00000026408) #27	Chrdl2 (ENSRNOG00000018394) #29	Pold3 (ENSRNOG00000018411)	Lipt2 (ENSRNOG00000016906)	Pgm2l1 (ENSRNOG00000017079) #32	P4ha3 (ENSRNOG00000017118) #34
Rat	MODERN SPECIES	4	Bcl2 (ENSRNOG00000067693)	Kdsr (ENSRNOG00000002781)	Vps4b (ENSRNOG00000002705)	Serpinb5 (ENSRNOG00000002640)	Serpinb12 (ENSRNOG00000002602)	Serpinb13 (ENSRNOG00000028194)	Serpinb3a (ENSRNOG00000066913)	Serpinb3 (ENSRNOG00000070387)	Serpinb11 (ENSRNOG00000002583)	Serpinb7 (ENSRNOG00000002555)	Serpinb2 (ENSRNOG00000002460)	Serpinb10 (ENSRNOG00000002417)	Serpinb8 (ENSRNOG00000002396)	RGD1560523 (ENSRNOG00000028513)	LOC108348870 (ENSRNOG00000029410)	ENSRNOG00000063241 #22	Cdh7 (ENSRNOG00000032490)	Cdh19 (ENSRNOG00000029841)	LOC120096235 (ENSRNOG00000070646)	ENSRNOG00000069109	ENSRNOG00000070301	Tsn (ENSRNOG00000002319)	Nifk (ENSRNOG00000025701)	Clasp1 (ENSRNOG00000002376)	Tfcp2l1 (ENSRNOG00000002414)	Gli2 (ENSRNOG00000007261)	ENSRNOG00000070618	Inhbb (ENSRNOG00000060237)	Ralb (ENSRNOG00000002440)	Tmem185b (ENSRNOG00000067956)	Epb41l5 (ENSRNOG00000002538)
Mus	ANCESTRAL SPECIES		ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01070000253969	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Mus_A	ANCESTRAL SPECIES	1	ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01070000253969	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Mus_B	ANCESTRAL SPECIES		ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01070000253969	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Mus_C	ANCESTRAL SPECIES	13	ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b.t	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01070000253969	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Steppe mouse	MODERN SPECIES	3349	Gucy2d (ENSMSIG00000026666) #10	Lrrc32 (ENSMSIG00000026734) #11	ENSMSIG00000026793	Emsy (ENSMSIG00000026804) #12	Thap12 (ENSMSIG00000027087)	Wnt11 (ENSMSIG00000027102) #14	Uvrag (ENSMSIG00000027125) #15	Dgat2 (ENSMSIG00000027153) #16	Mogat2 (ENSMSIG00000027187) #17	ENSMSIG00000027198	Map6 (ENSMSIG00000027203) #18	Serpinh1 (ENSMSIG00000027236) #19	Gdpd5 (ENSMSIG00000027274) #20	Klhl35 (ENSMSIG00000027326)	Rps3 (ENSMSIG00000027343) #21	ENSMSIG00000027402 #22	Tpbgl (ENSMSIG00000027507)	Slco2b1 (ENSMSIG00000027516) #23	Or2at4 (ENSMSIG00000027555)	Or2at1 (ENSMSIG00000027584)	ENSMSIG00000027596	ENSMSIG00000027598	Neu3 (ENSMSIG00000027608) #24	Spcs2 (ENSMSIG00000027625) #25	Xrra1 (ENSMSIG00000027684) #26	Rnf169 (ENSMSIG00000027708) #27	Chrdl2 (ENSMSIG00000027712) #29	ENSMSIG00000027727	Pold3 (ENSMSIG00000027730)	Lipt2 (ENSMSIG00000027742)	Kcne3 (ENSMSIG00000027746) #31
spretus	MODERN SPECIES	16	Acer3 (MGP_SPRETEiJ_G0031125) #8	Tsku (MGP_SPRETEiJ_G0031126) #9	Gucy2d (MGP_SPRETEiJ_G0031127) #10	Lrrc32 (MGP_SPRETEiJ_G0031128) #11	Emsy (MGP_SPRETEiJ_G0031129) #12	MGP_SPRETEiJ_G0031130	Wnt11 (MGP_SPRETEiJ_G0031131) #14	Uvrag (MGP_SPRETEiJ_G0031132) #15	Dgat2 (MGP_SPRETEiJ_G0031133) #16	Mogat2 (MGP_SPRETEiJ_G0031134) #17	Map6 (MGP_SPRETEiJ_G0031135) #18	Serpinh1 (MGP_SPRETEiJ_G0031136) #19	Gdpd5 (MGP_SPRETEiJ_G0031137) #20	Klhl35 (MGP_SPRETEiJ_G0031138)	Rps3 (MGP_SPRETEiJ_G0031139) #21	Arrb1 (MGP_SPRETEiJ_G0031140) #22	Tpbgl (MGP_SPRETEiJ_G0031141)	Slco2b1 (MGP_SPRETEiJ_G0031142) #23	MGP_SPRETEiJ_G0031143	MGP_SPRETEiJ_G0031144	Neu3 (MGP_SPRETEiJ_G0031145) #24	Spcs2 (MGP_SPRETEiJ_G0031146) #25	Xrra1 (MGP_SPRETEiJ_G0031147) #26	Rnf169 (MGP_SPRETEiJ_G0031148) #27	Chrdl2 (MGP_SPRETEiJ_G0031149) #29	Pold3 (MGP_SPRETEiJ_G0031150)	Lipt2 (MGP_SPRETEiJ_G0031151)	Kcne3 (MGP_SPRETEiJ_G0031152) #31	Pgm2l1 (MGP_SPRETEiJ_G0031153) #32	P4ha3 (MGP_SPRETEiJ_G0031154) #34	Ppme1 (MGP_SPRETEiJ_G0031155) #35
Mouse	MODERN SPECIES	16	Acer3 (ENSMUSG00000030760) #8	Tsku (ENSMUSG00000049580) #9	Gucy2d (ENSMUSG00000074003) #10	Lrrc32 (ENSMUSG00000090958) #11	Emsy (ENSMUSG00000035401) #12	Thap12 (ENSMUSG00000030753)	Wnt11 (ENSMUSG00000015957) #14	Uvrag (ENSMUSG00000035354) #15	Dgat2 (ENSMUSG00000030747) #16	Mogat2 (ENSMUSG00000052396) #17	Map6 (ENSMUSG00000055407) #18	Serpinh1 (ENSMUSG00000070436) #19	Gdpd5 (ENSMUSG00000035314) #20	Klhl35 (ENSMUSG00000035298)	Rps3 (ENSMUSG00000030744) #21	Arrb1 (ENSMUSG00000018909) #22	Tpbgl (ENSMUSG00000096606)	Slco2b1 (ENSMUSG00000030737) #23	Or2at4 (ENSMUSG00000073998)	Or2at1 (ENSMUSG00000073997)	Neu3 (ENSMUSG00000035239) #24	Spcs2 (ENSMUSG00000035227) #25	Xrra1 (ENSMUSG00000035211) #26	Rnf169 (ENSMUSG00000058761) #27	Chrdl2 (ENSMUSG00000030732) #29	Pold3 (ENSMUSG00000030726)	Lipt2 (ENSMUSG00000030725)	Kcne3 (ENSMUSG00000035165) #31	Pgm2l1 (ENSMUSG00000030729) #32	P4ha3 (ENSMUSG00000051048) #34	Ppme1 (ENSMUSG00000030718) #35
Ryukyu mouse	MODERN SPECIES	16	Acer3 (MGP_CAROLIEiJ_G0030015) #8	Tsku (MGP_CAROLIEiJ_G0030016) #9	Gucy2d (MGP_CAROLIEiJ_G0030017) #10	Lrrc32 (MGP_CAROLIEiJ_G0030018) #11	Emsy (MGP_CAROLIEiJ_G0030019) #12	Thap12 (MGP_CAROLIEiJ_G0030020)	Wnt11 (MGP_CAROLIEiJ_G0030021) #14	Uvrag (MGP_CAROLIEiJ_G0030022) #15	MGP_CAROLIEiJ_G0030023 #16	Mogat2 (MGP_CAROLIEiJ_G0030024) #17	Map6 (MGP_CAROLIEiJ_G0030025) #18	Serpinh1 (MGP_CAROLIEiJ_G0030026) #19	Gdpd5 (MGP_CAROLIEiJ_G0030027) #20	Klhl35 (MGP_CAROLIEiJ_G0030028)	Rps3 (MGP_CAROLIEiJ_G0030029) #21	Arrb1 (MGP_CAROLIEiJ_G0030030) #22	Tpbgl (MGP_CAROLIEiJ_G0030031)	Slco2b1 (MGP_CAROLIEiJ_G0030032) #23	MGP_CAROLIEiJ_G0030033	MGP_CAROLIEiJ_G0030034	Spcs2 (MGP_CAROLIEiJ_G0030035) #25	Xrra1 (MGP_CAROLIEiJ_G0030036) #26	Rnf169 (MGP_CAROLIEiJ_G0030037) #27	Chrdl2 (MGP_CAROLIEiJ_G0030038) #29	Pold3 (MGP_CAROLIEiJ_G0030039)	Lipt2 (MGP_CAROLIEiJ_G0030040)	Kcne3 (MGP_CAROLIEiJ_G0030041) #31	Pgm2l1 (MGP_CAROLIEiJ_G0030042) #32	P4ha3 (MGP_CAROLIEiJ_G0030043) #34	Ppme1 (MGP_CAROLIEiJ_G0030044) #35	C2cd3 (MGP_CAROLIEiJ_G0030045) #36
Shrew mouse	MODERN SPECIES		Acer3 (MGP_PahariEiJ_G0013236) #8	Tsku (MGP_PahariEiJ_G0013237) #9	Gucy2d (MGP_PahariEiJ_G0013238) #10	Lrrc32 (MGP_PahariEiJ_G0013239) #11	Emsy (MGP_PahariEiJ_G0013240) #12	Thap12 (MGP_PahariEiJ_G0013241)	Wnt11 (MGP_PahariEiJ_G0013242) #14	Uvrag (MGP_PahariEiJ_G0013243) #15	Dgat2 (MGP_PahariEiJ_G0013244) #16	Mogat2 (MGP_PahariEiJ_G0013245) #17	Map6 (MGP_PahariEiJ_G0013246) #18	Serpinh1 (MGP_PahariEiJ_G0013247) #19	Gdpd5 (MGP_PahariEiJ_G0013248) #20	Klhl35 (MGP_PahariEiJ_G0013249)	Rps3 (MGP_PahariEiJ_G0013250) #21	Arrb1 (MGP_PahariEiJ_G0013251) #22	Tpbgl (MGP_PahariEiJ_G0013252)	Slco2b1 (MGP_PahariEiJ_G0013253) #23	Or2at4 (MGP_PahariEiJ_G0013254)	MGP_PahariEiJ_G0013255	Neu3 (MGP_PahariEiJ_G0013256) #24	Spcs2 (MGP_PahariEiJ_G0013257) #25	Xrra1 (MGP_PahariEiJ_G0013258) #26	Rnf169 (MGP_PahariEiJ_G0013259) #27	Chrdl2 (MGP_PahariEiJ_G0013260) #29	Pold3 (MGP_PahariEiJ_G0013261)	Lipt2 (MGP_PahariEiJ_G0013262)	Kcne3 (MGP_PahariEiJ_G0013263) #31	Pgm2l1 (MGP_PahariEiJ_G0013264) #32	P4ha3 (MGP_PahariEiJ_G0013265) #34	Ppme1 (MGP_PahariEiJ_G0013266) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	1254	Acer3 (ENSNGAG00000018623) #8	Tsku (ENSNGAG00000015490) #9	Gucy2d (ENSNGAG00000020383) #10	Lrrc32 (ENSNGAG00000010300) #11	Emsy (ENSNGAG00000013674) #12	ENSNGAG00000013016	Wnt11 (ENSNGAG00000013425) #14	Uvrag (ENSNGAG00000018199) #15	Dgat2 (ENSNGAG00000012414) #16	Mogat2 (ENSNGAG00000015554) #17	Map6 (ENSNGAG00000013077) #18	Serpinh1 (ENSNGAG00000015539) #19	ENSNGAG00000013714	Klhl35 (ENSNGAG00000009818)	Rps3 (ENSNGAG00000015514) #21	Arrb1 (ENSNGAG00000010423) #22	Tpbgl (ENSNGAG00000000289)	Slco2b1 (ENSNGAG00000001998) #23	ENSNGAG00000016422	ENSNGAG00000016993	Neu3 (ENSNGAG00000011806) #24	Spcs2 (ENSNGAG00000013220) #25	Xrra1 (ENSNGAG00000012048) #26	Rnf169 (ENSNGAG00000019560) #27	Chrdl2 (ENSNGAG00000000179) #29	ENSNGAG00000013165
Lesser Egyptian jerboa	MODERN SPECIES	59	Acer3 (ENSJJAG00000016119) #8	Tsku (ENSJJAG00000012703) #9	ENSJJAG00000022648 #10	Lrrc32 (ENSJJAG00000000443) #11	Emsy (ENSJJAG00000022026) #12	ENSJJAG00000013737	Wnt11 (ENSJJAG00000014979) #14	Uvrag (ENSJJAG00000004695) #15	Dgat2 (ENSJJAG00000019379) #16	Mogat2 (ENSJJAG00000023310) #17	Map6 (ENSJJAG00000014715) #18	Serpinh1 (ENSJJAG00000023536) #19	ENSJJAG00000007355	Klhl35 (ENSJJAG00000013370)	Rps3 (ENSJJAG00000018981) #21	Arrb1 (ENSJJAG00000004361) #22	Tpbgl (ENSJJAG00000010465)	ENSJJAG00000021660 #23	Neu3 (ENSJJAG00000017819) #24	Spcs2 (ENSJJAG00000021065) #25	Xrra1 (ENSJJAG00000008569) #26	Rnf169 (ENSJJAG00000011953) #27	Chrdl2 (ENSJJAG00000016161) #29	Pold3 (ENSJJAG00000017773)	Lipt2 (ENSJJAG00000017301)	ENSJJAG00000023707	Kcne3 (ENSJJAG00000020890) #31	Pgm2l1 (ENSJJAG00000022120) #32	P4ha3 (ENSJJAG00000020207) #34	Ppme1 (ENSJJAG00000007410) #35	C2cd3 (ENSJJAG00000015746) #36
Lagomorpha	ANCESTRAL SPECIES	5	ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163.g.b #19	ENSGT00940000156163.h #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35	ENSGT00510000048072 #36
Pika	MODERN SPECIES	1486																ENSOPRG00000008208 #22
Rabbit	MODERN SPECIES		TSKU (ENSOCUG00000021411) #9	LRRC32 (ENSOCUG00000015394) #11	EMSY (ENSOCUG00000017880) #12	ENSOCUG00000035359	THAP12 (ENSOCUG00000009178)	WNT11 (ENSOCUG00000001726) #14	UVRAG (ENSOCUG00000014223) #15	ENSOCUG00000033370	MOGAT2 (ENSOCUG00000014215) #17	ENSOCUG00000003302 #18	ENSOCUG00000026029 #19	ENSOCUG00000032044 #19	GDPD5 (ENSOCUG00000026378) #20	KLHL35 (ENSOCUG00000012395)	RPS3 (ENSOCUG00000022412) #21	ARRB1 (ENSOCUG00000026291) #22	TPBGL (ENSOCUG00000014231)	SLCO2B1 (ENSOCUG00000014225) #23	OR2AT4 (ENSOCUG00000027488)	ENSOCUG00000036432	NEU3 (ENSOCUG00000012531) #24	ENSOCUG00000038071 #25	XRRA1 (ENSOCUG00000012514) #26	ENSOCUG00000026028	RNF169 (ENSOCUG00000001789) #27	CHRDL2 (ENSOCUG00000022782) #29	POLD3 (ENSOCUG00000002523)	ENSOCUG00000016447 #31	PGM2L1 (ENSOCUG00000005709) #32	P4HA3 (ENSOCUG00000010111) #34	ENSOCUG00000026735 #35
Tree shrew	MODERN SPECIES	3807														ENSTBEG00000007259	RPS3 (ENSTBEG00000007053) #21	ARRB1 (ENSTBEG00000006210) #22	ENSTBEG00000005344 #23	OR2AT4 (ENSTBEG00000005160)
Primates	ANCESTRAL SPECIES		ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00910000147753	ENSGT00940000158967 #34
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00910000147753	ENSGT00940000158967 #34
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00910000148220	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00910000147753	ENSGT00940000158967 #34
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00940000160984 #9	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00910000148220	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Cebidae	ANCESTRAL SPECIES		ENSGT00940000160984 #9	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00910000148220	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Marmoset	MODERN SPECIES	2	TSKU (ENSCJAG00000015198) #9	LRRC32 (ENSCJAG00000041496) #11	EMSY (ENSCJAG00000015204) #12	GVQW3 (ENSCJAG00000015286) #13	THAP12 (ENSCJAG00000012300)	WNT11 (ENSCJAG00000015296) #14	UVRAG (ENSCJAG00000015319) #15	DGAT2 (ENSCJAG00000015337) #16	MOGAT2 (ENSCJAG00000015357) #17	MAP6 (ENSCJAG00000015365) #18	SERPINH1 (ENSCJAG00000015377) #19	GDPD5 (ENSCJAG00000015399) #20	KLHL35 (ENSCJAG00000015421)	RPS3 (ENSCJAG00000015424) #21	ENSCJAG00000072627	ARRB1 (ENSCJAG00000015459) #22	TPBGL (ENSCJAG00000022087)	SLCO2B1 (ENSCJAG00000015525) #23	OR2AT4 (ENSCJAG00000015558)	ENSCJAG00000022088	ENSCJAG00000067324	NEU3 (ENSCJAG00000015573) #24	SPCS2 (ENSCJAG00000015576) #25	XRRA1 (ENSCJAG00000015587) #26	ENSCJAG00000083650	RNF169 (ENSCJAG00000015610) #27	CHRDL2 (ENSCJAG00000015616) #29	POLD3 (ENSCJAG00000015657)	ENSCJAG00000053703	LIPT2 (ENSCJAG00000038278)	KCNE3 (ENSCJAG00000042738) #31
Cebidae_a	ANCESTRAL SPECIES	10	ENSGT00940000160984 #9	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00910000148220	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00630000089910.ib.b.a	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35	ENSGT00510000048072 #36	ENSGT00940000161030 #37
Capuchin	MODERN SPECIES	79	ACER3 (ENSCCAG00000022320) #8	LRRC32 (ENSCCAG00000036797) #11	EMSY (ENSCCAG00000033043) #12	GVQW3 (ENSCCAG00000017675) #13	THAP12 (ENSCCAG00000030247)	WNT11 (ENSCCAG00000006507) #14	UVRAG (ENSCCAG00000004406) #15	DGAT2 (ENSCCAG00000025871) #16	MOGAT2 (ENSCCAG00000033399) #17	ENSCCAG00000019602	MAP6 (ENSCCAG00000038045) #18	SERPINH1 (ENSCCAG00000036630) #19	GDPD5 (ENSCCAG00000037483) #20	KLHL35 (ENSCCAG00000024110)	RPS3 (ENSCCAG00000022155) #21	ARRB1 (ENSCCAG00000022418) #22	TPBGL (ENSCCAG00000020228)	SLCO2B1 (ENSCCAG00000020122) #23	NEU3 (ENSCCAG00000030531) #24	SPCS2 (ENSCCAG00000021321) #25	XRRA1 (ENSCCAG00000028930) #26	RNF169 (ENSCCAG00000033395) #27	CHRDL2 (ENSCCAG00000022957) #29	POLD3 (ENSCCAG00000020511)	LIPT2 (ENSCCAG00000036486)	ENSCCAG00000021883	PGM2L1 (ENSCCAG00000036451) #32	P4HA3 (ENSCCAG00000020903) #34	PPME1 (ENSCCAG00000026198) #35	C2CD3 (ENSCCAG00000030238) #36	UCP3 (ENSCCAG00000031398) #37
Bolivian squirrel monkey	MODERN SPECIES	50	NTM (ENSSBOG00000006706)	OPCML (ENSSBOG00000026714)	LRRC32 (ENSSBOG00000034148) #11	EMSY (ENSSBOG00000035462) #12	GVQW3 (ENSSBOG00000031479) #13	WNT11 (ENSSBOG00000020772) #14	UVRAG (ENSSBOG00000029244) #15	DGAT2 (ENSSBOG00000034703) #16	MOGAT2 (ENSSBOG00000028341) #17	MAP6 (ENSSBOG00000034653) #18	SERPINH1 (ENSSBOG00000023324) #19	ENSSBOG00000015754	GDPD5 (ENSSBOG00000029684) #20	KLHL35 (ENSSBOG00000032736)	RPS3 (ENSSBOG00000021847) #21	ARRB1 (ENSSBOG00000027344) #22	SLCO2B1 (ENSSBOG00000029587) #23	NEU3 (ENSSBOG00000032626) #24	ENSSBOG00000018610 #25	XRRA1 (ENSSBOG00000023521) #26	RNF169 (ENSSBOG00000025127) #27	CHRDL2 (ENSSBOG00000030089) #29	POLD3 (ENSSBOG00000026466)	LIPT2 (ENSSBOG00000028686)	ENSSBOG00000016069	ENSSBOG00000026074	ENSSBOG00000029238	PGM2L1 (ENSSBOG00000021467) #32	P4HA3 (ENSSBOG00000021114) #34	PPME1 (ENSSBOG00000031236) #35	C2CD3 (ENSSBOG00000023741) #36
Mas night monkey	MODERN SPECIES	575	TSKU (ENSANAG00000028760) #9	LRRC32 (ENSANAG00000036098) #11	EMSY (ENSANAG00000037605) #12	GVQW3 (ENSANAG00000033324) #13	THAP12 (ENSANAG00000034553)	WNT11 (ENSANAG00000023221) #14	UVRAG (ENSANAG00000037389) #15	DGAT2 (ENSANAG00000033159) #16	MOGAT2 (ENSANAG00000030684) #17	ENSANAG00000025561 #18	ENSANAG00000028881 #18	SERPINH1 (ENSANAG00000002099) #19	GDPD5 (ENSANAG00000029652) #20	KLHL35 (ENSANAG00000029592)	RPS3 (ENSANAG00000027669) #21	ARRB1 (ENSANAG00000037078) #22	TPBGL (ENSANAG00000022236)	SLCO2B1 (ENSANAG00000027304) #23	ENSANAG00000033225	NEU3 (ENSANAG00000031004) #24	ENSANAG00000035609 #25	XRRA1 (ENSANAG00000037118) #26	RNF169 (ENSANAG00000025789) #27	CHRDL2 (ENSANAG00000025866) #29	POLD3 (ENSANAG00000030270)	ENSANAG00000020663	KCNE3 (ENSANAG00000014115) #31
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00910000147490	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.y.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163.e #19	ENSGT00940000159690 #20	ENSGT00910000148220	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181.eb.a.a #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00910000147753
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00910000147490	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.y.a.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163.e #19	ENSGT00940000159690 #20	ENSGT00910000148220	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.r	ENSGT00940000163113	ENSGT00940000162049.q	ENSGT00950000182944.A #24	ENSGT00440000038181.eb.b #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000160984 #9	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00910000147490	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.y.a.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163.e #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.r	ENSGT00940000163113	ENSGT00940000162049.q	ENSGT00950000182944.A #24	ENSGT00440000038181.eb.b #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Orangutan	MODERN SPECIES	2	TSKU (ENSPPYG00000003702) #9	LRRC32 (ENSPPYG00000003700) #11	EMSY (ENSPPYG00000003699) #12	ENSPPYG00000003698 #13	THAP12 (ENSPPYG00000003697)	ENSPPYG00000040892	WNT11 (ENSPPYG00000003696) #14	UVRAG (ENSPPYG00000003695) #15	DGAT2 (ENSPPYG00000003694) #16	MOGAT2 (ENSPPYG00000003693) #17	MAP6 (ENSPPYG00000003692) #18	SERPINH1 (ENSPPYG00000003691) #19	GDPD5 (ENSPPYG00000003690) #20	KLHL35 (ENSPPYG00000003689)	RPS3 (ENSPPYG00000003688) #21	ARRB1 (ENSPPYG00000039190) #22	TPBGL (ENSPPYG00000003686)	SLCO2B1 (ENSPPYG00000003684) #23	NEU3 (ENSPPYG00000033538) #24	SPCS2 (ENSPPYG00000003682) #25	ENSPPYG00000034798	XRRA1 (ENSPPYG00000003681) #26	RNF169 (ENSPPYG00000003680) #27	CHRDL2 (ENSPPYG00000003678) #29	POLD3 (ENSPPYG00000003677)	LIPT2 (ENSPPYG00000003676)	KCNE3 (ENSPPYG00000003675) #31	PGM2L1 (ENSPPYG00000003674) #32	P4HA3 (ENSPPYG00000003673) #34	PPME1 (ENSPPYG00000003671) #35	C2CD3 (ENSPPYG00000003670) #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00940000162288 #11	ENSGT00390000009554.p #12	ENSGT00910000147490	ENSGT00390000009554.o #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.y.a.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163.e #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.r	ENSGT00940000163113	ENSGT00940000162049.q	ENSGT00950000182944.A #24	ENSGT00440000038181.eb.b #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Gorilla	MODERN SPECIES	2	B3GNT6 (ENSGGOG00000000016) #7	ACER3 (ENSGGOG00000003818) #8	TSKU (ENSGGOG00000008670) #9	LRRC32 (ENSGGOG00000001727) #11	EMSY (ENSGGOG00000012926) #12	GVQW3 (ENSGGOG00000027994) #13	THAP12 (ENSGGOG00000006152)	WNT11 (ENSGGOG00000015024) #14	UVRAG (ENSGGOG00000002911) #15	DGAT2 (ENSGGOG00000002910) #16	MAP6 (ENSGGOG00000005400) #18	SERPINH1 (ENSGGOG00000005397) #19	GDPD5 (ENSGGOG00000015848) #20	KLHL35 (ENSGGOG00000015839)	RPS3 (ENSGGOG00000006519) #21	ARRB1 (ENSGGOG00000009699) #22	SLCO2B1 (ENSGGOG00000007327) #23	OR2AT4 (ENSGGOG00000023922)	NEU3 (ENSGGOG00000014507) #24	SPCS2 (ENSGGOG00000014500) #25	XRRA1 (ENSGGOG00000014505) #26	RNF169 (ENSGGOG00000014493) #27	CHRDL2 (ENSGGOG00000012629) #29	POLD3 (ENSGGOG00000012878)	ENSGGOG00000005892	KCNE3 (ENSGGOG00000041355) #31	PGM2L1 (ENSGGOG00000007865) #32	P4HA3 (ENSGGOG00000007853) #34	PPME1 (ENSGGOG00000000347) #35	C2CD3 (ENSGGOG00000000345) #36	UCP3 (ENSGGOG00000000344) #37
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000162288 #11	ENSGT00390000009554.p #12	ENSGT00910000147490	ENSGT00390000009554.o #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.y.a.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163.e #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.r	ENSGT00940000163113	ENSGT00940000162049.q	ENSGT00950000182944.A #24	ENSGT00440000038181.eb.b #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Human	MODERN SPECIES	2	ACER3 (ENSG00000078124) #8	TSKU (ENSG00000182704) #9	LRRC32 (ENSG00000137507) #11	EMSY (ENSG00000158636) #12	GVQW3 (ENSG00000179240) #13	THAP12 (ENSG00000137492)	WNT11 (ENSG00000085741) #14	UVRAG (ENSG00000198382) #15	DGAT2 (ENSG00000062282) #16	MOGAT2 (ENSG00000166391) #17	MAP6 (ENSG00000171533) #18	SERPINH1 (ENSG00000149257) #19	GDPD5 (ENSG00000158555) #20	KLHL35 (ENSG00000149243)	RPS3 (ENSG00000149273) #21	ARRB1 (ENSG00000137486) #22	TPBGL (ENSG00000261594)	SLCO2B1 (ENSG00000137491) #23	OR2AT4 (ENSG00000171561)	NEU3 (ENSG00000162139) #24	SPCS2 (ENSG00000118363) #25	XRRA1 (ENSG00000166435) #26	RNF169 (ENSG00000166439) #27	CHRDL2 (ENSG00000054938) #29	POLD3 (ENSG00000077514)	LIPT2 (ENSG00000175536)	KCNE3 (ENSG00000175538) #31	PGM2L1 (ENSG00000165434) #32	P4HA3 (ENSG00000149380) #34	PPME1 (ENSG00000214517) #35	C2CD3 (ENSG00000168014) #36
Pan	ANCESTRAL SPECIES	1	ENSGT00940000162288 #11	ENSGT00390000009554.p #12	ENSGT00910000147490	ENSGT00390000009554.o #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.y.a.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163.e #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.r	ENSGT00940000163113	ENSGT00940000162049.q	ENSGT00950000182944.A #24	ENSGT00440000038181.eb.b #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Chimpanzee	MODERN SPECIES	2	TSKU (ENSPTRG00000028468) #9	LRRC32 (ENSPTRG00000004094) #11	EMSY (ENSPTRG00000004093) #12	ENSPTRG00000049644	ENSPTRG00000028470 #13	THAP12 (ENSPTRG00000004091)	WNT11 (ENSPTRG00000004090) #14	UVRAG (ENSPTRG00000004088) #15	DGAT2 (ENSPTRG00000004087) #16	MOGAT2 (ENSPTRG00000004086) #17	MAP6 (ENSPTRG00000004085) #18	SERPINH1 (ENSPTRG00000004083) #19	GDPD5 (ENSPTRG00000046453) #20	KLHL35 (ENSPTRG00000004081)	RPS3 (ENSPTRG00000048574) #21	ARRB1 (ENSPTRG00000004079) #22	TPBGL (ENSPTRG00000052868)	SLCO2B1 (ENSPTRG00000004078) #23	ENSPTRG00000047698	OR2AT4 (ENSPTRG00000004076)	ENSPTRG00000043832	NEU3 (ENSPTRG00000043132) #24	SPCS2 (ENSPTRG00000004073) #25	XRRA1 (ENSPTRG00000004071) #26	RNF169 (ENSPTRG00000049248) #27	CHRDL2 (ENSPTRG00000004069) #29	POLD3 (ENSPTRG00000004067)	LIPT2 (ENSPTRG00000004066)	KCNE3 (ENSPTRG00000038909) #31	PGM2L1 (ENSPTRG00000004064) #32	P4HA3 (ENSPTRG00000004063) #34
Bonobo	MODERN SPECIES	2	LRRC32 (ENSPPAG00000028327) #11	ENSPPAG00000027471 #12	THAP12 (ENSPPAG00000005479)	ENSPPAG00000028053 #13	ENSPPAG00000038460 #12	ENSPPAG00000030327	WNT11 (ENSPPAG00000010959) #14	UVRAG (ENSPPAG00000027735) #15	DGAT2 (ENSPPAG00000015345) #16	MOGAT2 (ENSPPAG00000012175) #17	ENSPPAG00000040024 #18	ENSPPAG00000041483 #19	GDPD5 (ENSPPAG00000042473) #20	KLHL35 (ENSPPAG00000010945)	RPS3 (ENSPPAG00000029211) #21	ARRB1 (ENSPPAG00000040868) #22	SLCO2B1 (ENSPPAG00000031133) #23	ENSPPAG00000015262	OR2AT4 (ENSPPAG00000043903)	ENSPPAG00000042780	NEU3 (ENSPPAG00000040988) #24	SPCS2 (ENSPPAG00000030175) #25	ENSPPAG00000043856	XRRA1 (ENSPPAG00000041615) #26	RNF169 (ENSPPAG00000020912) #27	CHRDL2 (ENSPPAG00000028622) #29	POLD3 (ENSPPAG00000042261)	LIPT2 (ENSPPAG00000034746)	KCNE3 (ENSPPAG00000022031) #31	PGM2L1 (ENSPPAG00000029213) #32	P4HA3 (ENSPPAG00000041975) #34
Gibbon	MODERN SPECIES	5	LRRC32 (ENSNLEG00000016810) #11	EMSY (ENSNLEG00000016812) #12	ENSNLEG00000028651	ENSNLEG00000033823 #13	ENSNLEG00000032732	WNT11 (ENSNLEG00000016841) #14	UVRAG (ENSNLEG00000027301) #15	DGAT2 (ENSNLEG00000016866) #16	MOGAT2 (ENSNLEG00000028048) #17	MAP6 (ENSNLEG00000016878) #18	SERPINH1 (ENSNLEG00000016882) #19	GDPD5 (ENSNLEG00000028251) #20	ENSNLEG00000016910	ENSNLEG00000016911	ENSNLEG00000036221 ##21	ARRB1 (ENSNLEG00000016918) #22	TPBGL (ENSNLEG00000018145)	SLCO2B1 (ENSNLEG00000033859) #23	ENSNLEG00000016946	NEU3 (ENSNLEG00000016947) #24	ENSNLEG00000034374 #25	XRRA1 (ENSNLEG00000016958) #26	ENSNLEG00000035901	RNF169 (ENSNLEG00000016979) #27	CHRDL2 (ENSNLEG00000016982) #29	POLD3 (ENSNLEG00000016988)	LIPT2 (ENSNLEG00000017004)	KCNE3 (ENSNLEG00000028730) #31	PGM2L1 (ENSNLEG00000017008) #32	P4HA3 (ENSNLEG00000017017) #34	PPME1 (ENSNLEG00000029165) #35
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00910000147490	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.y.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163.e #19	ENSGT00940000159690 #20	ENSGT00910000148220	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00390000013347.b.b	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181.eb.a.a #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00910000147753
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00910000147490	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.y.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163.e #19	ENSGT00940000159690 #20	ENSGT00910000148220	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00390000013347.b.b	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181.eb.a.a.b #25	ENSGT00390000016048.b #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00910000147753
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00530000063516.a.a.c.b.y.a.d	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163.e #19	ENSGT00940000159690 #20	ENSGT00910000148220	ENSGT00940000161093	ENSGT00390000008610.a.a ##21	ENSGT00910000146972	ENSGT00390000006485.c	ENSGT00510000046985.h.b.a.b	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00390000013347.b.b	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181.eb.a.a.b #25	ENSGT00390000016048.b #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000018145.cb.a.a.b.a	ENSGT00940000166824	ENSGT00390000006450	ENSGT00940000155001.B #31
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00910000147490	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.y.a.d	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163.e #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.a ##21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00390000013347.b.b	ENSGT00940000163113.b	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181.eb.a.a.b #25	ENSGT00390000016048.b #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000018145.cb.a.a.b.a	ENSGT00940000166824	ENSGT00390000006450	ENSGT00940000155001.B #31
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00910000147490	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.y.a.d	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163.e #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.a ##21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00390000013347.b.b	ENSGT00940000163113.b	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181.eb.a.a.b #25	ENSGT00390000016048.b #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00940000166824	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32
Rhesus	MODERN SPECIES	5	TSKU (ENSMMUG00000058889) #9	LRRC32 (ENSMMUG00000022403) #11	EMSY (ENSMMUG00000022401) #12	GVQW3 (ENSMMUG00000059619) #13	THAP12 (ENSMMUG00000048604)	WNT11 (ENSMMUG00000051614) #14	UVRAG (ENSMMUG00000000187) #15	DGAT2 (ENSMMUG00000000185) #16	MOGAT2 (ENSMMUG00000000506) #17	MAP6 (ENSMMUG00000007676) #18	SERPINH1 (ENSMMUG00000007675) #19	GDPD5 (ENSMMUG00000009022) #20	KLHL35 (ENSMMUG00000063403)	RPS3 (ENSMMUG00000009019) #21	ENSMMUG00000060246	ARRB1 (ENSMMUG00000017529) #22	TPBGL (ENSMMUG00000045580)	ENSMMUG00000047594	OR2AT4 (ENSMMUG00000010688)	SLCO2B1 (ENSMMUG00000009126) #23	ENSMMUG00000064190	NEU3 (ENSMMUG00000010686) #24	SPCS2 (ENSMMUG00000010685) #25	XRRA1 (ENSMMUG00000021039) #26	RNF169 (ENSMMUG00000052870) #27	CHRDL2 (ENSMMUG00000020644) #29	POLD3 (ENSMMUG00000020643) #30	ENSMMUG00000013093	LIPT2 (ENSMMUG00000013094)	KCNE3 (ENSMMUG00000052952) #31	ENSMMUG00000056316
Crab-eating macaque	MODERN SPECIES	5	ENSMFAG00000049800 #10	LRRC32 (ENSMFAG00000039295) #11	EMSY (ENSMFAG00000041695) #12	ENSMFAG00000052205	ENSMFAG00000042788 #13	THAP12 (ENSMFAG00000033682)	WNT11 (ENSMFAG00000043196) #14	UVRAG (ENSMFAG00000001657) #15	DGAT2 (ENSMFAG00000042930) #16	MOGAT2 (ENSMFAG00000032272) #17	MAP6 (ENSMFAG00000064715) #18	SERPINH1 (ENSMFAG00000043814) #19	GDPD5 (ENSMFAG00000043053) #20	KLHL35 (ENSMFAG00000031078)	ENSMFAG00000000525 ##21	ARRB1 (ENSMFAG00000042650) #22	SLCO2B1 (ENSMFAG00000042845) #23	ENSMFAG00000049841	OR2AT4 (ENSMFAG00000015937)	ENSMFAG00000035199	ENSMFAG00000062063	NEU3 (ENSMFAG00000034589) #24	ENSMFAG00000040665 #25	XRRA1 (ENSMFAG00000002984) #26	RNF169 (ENSMFAG00000031265) #27	CHRDL2 (ENSMFAG00000042027) #29	ENSMFAG00000001432 #30	ENSMFAG00000003267	ENSMFAG00000049105	LIPT2 (ENSMFAG00000038446)	KCNE3 (ENSMFAG00000028410) #31
Pig-tailed macaque	MODERN SPECIES	423	TSKU (ENSMNEG00000013194) #9	LRRC32 (ENSMNEG00000041843) #11	EMSY (ENSMNEG00000041511) #12	ENSMNEG00000025096	GVQW3 (ENSMNEG00000035110) #13	ENSMNEG00000014529	WNT11 (ENSMNEG00000042384) #14	UVRAG (ENSMNEG00000036116) #15	DGAT2 (ENSMNEG00000045455) #16	MOGAT2 (ENSMNEG00000017020) #17	MAP6 (ENSMNEG00000028588) #18	SERPINH1 (ENSMNEG00000034292) #19	GDPD5 (ENSMNEG00000040623) #20	KLHL35 (ENSMNEG00000038478)	ENSMNEG00000032069 ##21	ARRB1 (ENSMNEG00000040641) #22	TPBGL (ENSMNEG00000021296)	SLCO2B1 (ENSMNEG00000042734) #23	ENSMNEG00000030448	ENSMNEG00000043807	OR2AT4 (ENSMNEG00000004250)	ENSMNEG00000031819	NEU3 (ENSMNEG00000036089) #24	ENSMNEG00000040433 #25	XRRA1 (ENSMNEG00000041388) #26	RNF169 (ENSMNEG00000011250) #27	CHRDL2 (ENSMNEG00000033501) #29	ENSMNEG00000043787 #30	ENSMNEG00000036818	ENSMNEG00000035237	LIPT2 (ENSMNEG00000029656)
Cercopithecinae_b	ANCESTRAL SPECIES	32	ENSGT00910000147490	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.y.a.d	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163.e #19	ENSGT00940000159690 #20	ENSGT00910000148220	ENSGT00940000161093	ENSGT00910000146972	ENSGT00390000006485.c	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00390000013347.b.b	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181.eb.a.a.b #25	ENSGT00390000016048.b #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000018145.cb.a.a.b.a	ENSGT00940000166824	ENSGT00390000006450	ENSGT00940000155001.B #31
Cercopithecinae_d	ANCESTRAL SPECIES	27	ENSGT00910000147490	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.y.a.d	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163.e #19	ENSGT00940000159690 #20	ENSGT00910000148220	ENSGT00940000161093	ENSGT00910000146972	ENSGT00390000006485.c	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00390000013347.b.b	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181.eb.a.a.b #25	ENSGT00390000016048.b #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000018145.cb.a.a.b.a	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32
Sooty mangabey	MODERN SPECIES	545	LRRC32 (ENSCATG00000039757) #11	EMSY (ENSCATG00000033145) #12	ENSCATG00000006180	GVQW3 (ENSCATG00000035253) #13	THAP12 (ENSCATG00000024587)	WNT11 (ENSCATG00000035881) #14	UVRAG (ENSCATG00000039451) #15	DGAT2 (ENSCATG00000001407) #16	MOGAT2 (ENSCATG00000038955) #17	MAP6 (ENSCATG00000044768) #18	SERPINH1 (ENSCATG00000043530) #19	GDPD5 (ENSCATG00000030069) #20	ENSCATG00000041303	KLHL35 (ENSCATG00000042763)	RPS3 (ENSCATG00000035348) #21	ARRB1 (ENSCATG00000039690) #22	TPBGL (ENSCATG00000010167)	SLCO2B1 (ENSCATG00000028037) #23	ENSCATG00000029708	OR2AT4 (ENSCATG00000009927)	ENSCATG00000019868	NEU3 (ENSCATG00000029743) #24	ENSCATG00000039999 #25	XRRA1 (ENSCATG00000039406) #26	RNF169 (ENSCATG00000043238) #27	CHRDL2 (ENSCATG00000018972) #29	ENSCATG00000043513 #30	ENSCATG00000000611	LIPT2 (ENSCATG00000029187)	PGM2L1 (ENSCATG00000029770) #32	ENSCATG00000011991
Drill	MODERN SPECIES	1404							UVRAG (ENSMLEG00000043625) #15	DGAT2 (ENSMLEG00000043052) #16	MOGAT2 (ENSMLEG00000031977) #17	MAP6 (ENSMLEG00000003608) #18	SERPINH1 (ENSMLEG00000029842) #19	GDPD5 (ENSMLEG00000038219) #20	ENSMLEG00000029117	RPS3 (ENSMLEG00000027047) #21	ENSMLEG00000001141	ARRB1 (ENSMLEG00000038818) #22	SLCO2B1 (ENSMLEG00000040970) #23	OR2AT4 (ENSMLEG00000028367)	ENSMLEG00000028250	NEU3 (ENSMLEG00000036085) #24	ENSMLEG00000037619 #25	ENSMLEG00000036513 #26
Olive baboon	MODERN SPECIES	3	ENSPANG00000049669 #10	LRRC32 (ENSPANG00000015382) #11	EMSY (ENSPANG00000007638) #12	ENSPANG00000007883 #13	ENSPANG00000003101	WNT11 (ENSPANG00000014353) #14	UVRAG (ENSPANG00000012471) #15	DGAT2 (ENSPANG00000005994) #16	MOGAT2 (ENSPANG00000008371) #17	MAP6 (ENSPANG00000048934) #18	SERPINH1 (ENSPANG00000033081) #19	GDPD5 (ENSPANG00000011141) #20	ENSPANG00000042578	KLHL35 (ENSPANG00000033783)	RPS3 (ENSPANG00000016549) #21	ARRB1 (ENSPANG00000011945) #22	TPBGL (ENSPANG00000050172)	SLCO2B1 (ENSPANG00000005995) #23	ENSPANG00000042782	ENSPANG00000048808	ENSPANG00000010014 #24	ENSPANG00000034355 #25	ENSPANG00000049173	ENSPANG00000037679 #26	ENSPANG00000050947 #31	ENSPANG00000045204	ENSPANG00000014355 #30	ENSPANG00000051353	ENSPANG00000040935	ENSPANG00000034020	CHRDL2 (ENSPANG00000011367) #29
Vervet Monkey	MODERN SPECIES		ACER3 (ENSCSAG00000003878) #8	TSKU (ENSCSAG00000000618) #9	LRRC32 (ENSCSAG00000003880) #11	EMSY (ENSCSAG00000003885) #12	THAP12 (ENSCSAG00000003894)	WNT11 (ENSCSAG00000003899) #14	UVRAG (ENSCSAG00000003902) #15	DGAT2 (ENSCSAG00000003904) #16	MOGAT2 (ENSCSAG00000003906) #17	MAP6 (ENSCSAG00000003908) #18	SERPINH1 (ENSCSAG00000003909) #19	GDPD5 (ENSCSAG00000003915) #20	ENSCSAG00000003917	ENSCSAG00000000619	RPS3 (ENSCSAG00000003937) #21	ARRB1 (ENSCSAG00000003950) #22	TPBGL (ENSCSAG00000000620)	SLCO2B1 (ENSCSAG00000003953) #23	OR2AT4 (ENSCSAG00000000621)	NEU3 (ENSCSAG00000003960) #24	ENSCSAG00000003967 #25	XRRA1 (ENSCSAG00000003983) #26	RNF169 (ENSCSAG00000003988) #27	CHRDL2 (ENSCSAG00000003992) #29	ENSCSAG00000004000 #30	LIPT2 (ENSCSAG00000004004)	KCNE3 (ENSCSAG00000000622) #31	PGM2L1 (ENSCSAG00000004011) #32	P4HA3 (ENSCSAG00000004019) #34	PPME1 (ENSCSAG00000004025) #35	C2CD3 (ENSCSAG00000004043) #36
Rhinopithecus	ANCESTRAL SPECIES	21	ENSGT00940000160984 #9	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00910000147490	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.y.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163.e #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT01080000257336.a.c.a #23	ENSGT00390000013347.b.b	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181.eb.a.a #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000018145.cb.a.a.b.a	ENSGT00940000166824	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32
Golden snub-nosed monkey	MODERN SPECIES	1304	TSKU (ENSRROG00000032131) #9	LRRC32 (ENSRROG00000028668) #11	EMSY (ENSRROG00000039855) #12	ENSRROG00000020533	GVQW3 (ENSRROG00000043820) #13	THAP12 (ENSRROG00000026238)	WNT11 (ENSRROG00000031068) #14	UVRAG (ENSRROG00000038883) #15	DGAT2 (ENSRROG00000029306) #16	MOGAT2 (ENSRROG00000018289) #17	ENSRROG00000033527 #18	SERPINH1 (ENSRROG00000034821) #19	GDPD5 (ENSRROG00000032119) #20	KLHL35 (ENSRROG00000042922)	RPS3 (ENSRROG00000009870) #21	ARRB1 (ENSRROG00000037258) #22	SLCO2B1 (ENSRROG00000029185) #23	ENSRROG00000038845	OR2AT4 (ENSRROG00000042697)	ENSRROG00000007318	NEU3 (ENSRROG00000029086) #24	ENSRROG00000009662 #25	XRRA1 (ENSRROG00000038284) #26	RNF169 (ENSRROG00000034271) #27	CHRDL2 (ENSRROG00000029406) #29	ENSRROG00000041045 #30	ENSRROG00000031930	ENSRROG00000040083	ENSRROG00000018216	LIPT2 (ENSRROG00000044982)	KCNE3 (ENSRROG00000008117) #31
Black snub-nosed monkey	MODERN SPECIES	775											MAP6 (ENSRBIG00000032932) #18	SERPINH1 (ENSRBIG00000028537) #19	GDPD5 (ENSRBIG00000037527) #20	KLHL35 (ENSRBIG00000036873)	RPS3 (ENSRBIG00000044916) #21	ARRB1 (ENSRBIG00000041523) #22	SLCO2B1 (ENSRBIG00000035476) #23	ENSRBIG00000037921	OR2AT4 (ENSRBIG00000036161)	ENSRBIG00000043933	NEU3 (ENSRBIG00000040960) #24	ENSRBIG00000011964 #25	XRRA1 (ENSRBIG00000036115) #26	RNF169 (ENSRBIG00000035895) #27	CHRDL2 (ENSRBIG00000028182) #29	ENSRBIG00000044531 #30	ENSRBIG00000011853	ENSRBIG00000001091	LIPT2 (ENSRBIG00000031912)	PGM2L1 (ENSRBIG00000043298) #32	ENSRBIG00000002437
Tarsier	MODERN SPECIES	2901													GDPD5 (ENSTSYG00000029959) #20	ENSTSYG00000033862	RPS3 (ENSTSYG00000008664) #21	ARRB1 (ENSTSYG00000033736) #22
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.n	ENSGT00940000163113	ENSGT00940000162049.m	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Lemuriformes	ANCESTRAL SPECIES	13	ENSGT00730000110920.a #8	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.n	ENSGT00940000163113	ENSGT00940000162049.m	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Lemuriformes_a	ANCESTRAL SPECIES	50	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.d	ENSGT00530000063516.a.a.c.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.n	ENSGT00940000163113	ENSGT00940000162049.m	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Coquerels sifaka	MODERN SPECIES	338	MYO7A (ENSPCOG00000001371)	CAPN5 (ENSPCOG00000021800)	ACER3 (ENSPCOG00000013273) #8	LRRC32 (ENSPCOG00000028697) #11	EMSY (ENSPCOG00000020972) #12	ENSPCOG00000027615	WNT11 (ENSPCOG00000014058) #14	UVRAG (ENSPCOG00000020635) #15	DGAT2 (ENSPCOG00000019069) #16	MOGAT2 (ENSPCOG00000017739) #17	MAP6 (ENSPCOG00000028415) #18	SERPINH1 (ENSPCOG00000016388) #19	GDPD5 (ENSPCOG00000023523) #20	KLHL35 (ENSPCOG00000012453)	RPS3 (ENSPCOG00000028750) #21	ARRB1 (ENSPCOG00000020960) #22	SLCO2B1 (ENSPCOG00000026296) #23	ENSPCOG00000026342	ENSPCOG00000004225	ENSPCOG00000026765	NEU3 (ENSPCOG00000014477) #24	ENSPCOG00000017986 #25	XRRA1 (ENSPCOG00000020432) #26	RNF169 (ENSPCOG00000016721) #27	CHRDL2 (ENSPCOG00000012970) #29	ENSPCOG00000020966	POLD3 (ENSPCOG00000024555)	LIPT2 (ENSPCOG00000018043)	PGM2L1 (ENSPCOG00000026248) #32	P4HA3 (ENSPCOG00000010138) #34	PPME1 (ENSPCOG00000012571) #35
Greater bamboo lemur	MODERN SPECIES	276												SERPINH1 (ENSPSMG00000002607) #19	GDPD5 (ENSPSMG00000002722) #20	KLHL35 (ENSPSMG00000002917)	ENSPSMG00000002960 #21	ARRB1 (ENSPSMG00000003120) #22	TPBGL (ENSPSMG00000003242)	SLCO2B1 (ENSPSMG00000003254) #23	ENSPSMG00000003266	OR2AT4 (ENSPSMG00000003274)	ENSPSMG00000003281	NEU3 (ENSPSMG00000003293) #24	SPCS2 (ENSPSMG00000003324) #25	XRRA1 (ENSPSMG00000003365) #26	RNF169 (ENSPSMG00000003387) #27	CHRDL2 (ENSPSMG00000003418) #29	POLD3 (ENSPSMG00000003441)	LIPT2 (ENSPSMG00000003465)	KCNE3 (ENSPSMG00000003468) #31	PGM2L1 (ENSPSMG00000003486) #32	P4HA3 (ENSPSMG00000003508) #34
Mouse lemur	MODERN SPECIES	27	MYO7A (ENSMICG00000013944)	CAPN5 (ENSMICG00000013928)	ACER3 (ENSMICG00000013908) #8	LRRC32 (ENSMICG00000026468) #11	EMSY (ENSMICG00000006143) #12	THAP12 (ENSMICG00000006139)	WNT11 (ENSMICG00000015306) #14	UVRAG (ENSMICG00000015281) #15	DGAT2 (ENSMICG00000015277) #16	MOGAT2 (ENSMICG00000015272) #17	MAP6 (ENSMICG00000015256) #18	SERPINH1 (ENSMICG00000015249) #19	GDPD5 (ENSMICG00000011193) #20	KLHL35 (ENSMICG00000045018)	RPS3 (ENSMICG00000030910) #21	ARRB1 (ENSMICG00000011177) #22	SLCO2B1 (ENSMICG00000011163) #23	ENSMICG00000038601	ENSMICG00000032041	ENSMICG00000035272	ENSMICG00000029787	NEU3 (ENSMICG00000046723) #24	ENSMICG00000011153 #25	XRRA1 (ENSMICG00000027081) #26	RNF169 (ENSMICG00000046917) #27	CHRDL2 (ENSMICG00000011134) #29	POLD3 (ENSMICG00000011102)	LIPT2 (ENSMICG00000045741)	ENSMICG00000002256 #32	P4HA3 (ENSMICG00000002249) #34	PPME1 (ENSMICG00000002244) #35
Bushbaby	MODERN SPECIES	116	TSKU (ENSOGAG00000016850) #9	ENSOGAG00000029463 #10	LRRC32 (ENSOGAG00000010967) #11	EMSY (ENSOGAG00000011434) #12	GVQW3 (ENSOGAG00000027877) #13	ENSOGAG00000001569	WNT11 (ENSOGAG00000001568) #14	UVRAG (ENSOGAG00000025371) #15	DGAT2 (ENSOGAG00000000330) #16	MOGAT2 (ENSOGAG00000000329) #17	MAP6 (ENSOGAG00000005329) #18	SERPINH1 (ENSOGAG00000032244) #19	GDPD5 (ENSOGAG00000027265) #20	KLHL35 (ENSOGAG00000005323)	RPS3 (ENSOGAG00000005318) #21	ARRB1 (ENSOGAG00000011549) #22	SLCO2B1 (ENSOGAG00000011545) #23	ENSOGAG00000002927	ENSOGAG00000030028	ENSOGAG00000034601	OR2AT4 (ENSOGAG00000024992)	ENSOGAG00000026432	NEU3 (ENSOGAG00000015623) #24	SPCS2 (ENSOGAG00000015621) #25	XRRA1 (ENSOGAG00000015617) #26	RNF169 (ENSOGAG00000015611) #27	CHRDL2 (ENSOGAG00000015608) #29	POLD3 (ENSOGAG00000015605)	LIPT2 (ENSOGAG00000015602)	KCNE3 (ENSOGAG00000032594) #31	PGM2L1 (ENSOGAG00000008333) #32
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00940000163113	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00910000147753	ENSGT00940000158967 #34
Eulipotyphla	ANCESTRAL SPECIES	700																ENSGT00950000182887.C.a.b #22	ENSGT00940000154868.b	ENSGT01080000257336.a.c.a #23
Hedgehog	MODERN SPECIES	6675																ARRB1 (ENSEEUG00000001107) #22	ENSEEUG00000001104	SLCO2B1 (ENSEEUG00000001074) #23
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00940000163113	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00910000147753	ENSGT00940000158967 #34
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00910000147753	ENSGT00940000158967 #34
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00940000163113	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Chiroptera	ANCESTRAL SPECIES	5	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00940000163113	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Megabat	MODERN SPECIES	788							WNT11 (ENSPVAG00000011291) #14	UVRAG (ENSPVAG00000011287) #15	DGAT2 (ENSPVAG00000011285) #16	MOGAT2 (ENSPVAG00000011283) #17	MAP6 (ENSPVAG00000011280) #18	SERPINH1 (ENSPVAG00000011278) #19	GDPD5 (ENSPVAG00000011275) #20	KLHL35 (ENSPVAG00000011274)	RPS3 (ENSPVAG00000011271) #21	ARRB1 (ENSPVAG00000011267) #22
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00940000163113	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Microbat	MODERN SPECIES	1373				UVRAG (ENSMLUG00000017450) #15	ENSMLUG00000025262	DGAT2 (ENSMLUG00000017447) #16	ENSMLUG00000025797	ENSMLUG00000024749	MOGAT2 (ENSMLUG00000001572) #17	MAP6 (ENSMLUG00000004112) #18	SERPINH1 (ENSMLUG00000004105) #19	GDPD5 (ENSMLUG00000004089) #20	KLHL35 (ENSMLUG00000004083)	RPS3 (ENSMLUG00000004079) #21	ENSMLUG00000028728	ARRB1 (ENSMLUG00000028342) #22	TPBGL (ENSMLUG00000008995)
Greater horseshoe bat	MODERN SPECIES	2	LRRC32 (ENSRFEG00010019506) #11	EMSY (ENSRFEG00010019268) #12	GVQW3 (ENSRFEG00010019199) #13	THAP12 (ENSRFEG00010019170)	WNT11 (ENSRFEG00010019130) #14	ENSRFEG00010019083	ENSRFEG00010019042	UVRAG (ENSRFEG00010018929) #15	DGAT2 (ENSRFEG00010018775) #16	MOGAT2 (ENSRFEG00010018707) #17	MAP6 (ENSRFEG00010018658) #18	SERPINH1 (ENSRFEG00010018606) #19	GDPD5 (ENSRFEG00010018359) #20	KLHL35 (ENSRFEG00010018271)	RPS3 (ENSRFEG00010018171) #21	ARRB1 (ENSRFEG00010018085) #22	TPBGL (ENSRFEG00010018053)	SLCO2B1 (ENSRFEG00010017798) #23	ENSRFEG00010017732	ENSRFEG00010017708	ENSRFEG00010017695	ENSRFEG00010017649	NEU3 (ENSRFEG00010017632) #24	SPCS2 (ENSRFEG00010017525) #25	XRRA1 (ENSRFEG00010016995) #26	RNF169 (ENSRFEG00010016892) #27	CHRDL2 (ENSRFEG00010016638) #29	ENSRFEG00010016605	POLD3 (ENSRFEG00010016519)	LIPT2 (ENSRFEG00010016489)	KCNE3 (ENSRFEG00010016472) #31
Equus	ANCESTRAL SPECIES	15	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Horse	MODERN SPECIES	28	LRRC32 (ENSECAG00000019895) #11	EMSY (ENSECAG00000020064) #12	GVQW3 (ENSECAG00000046273) #13	THAP12 (ENSECAG00000021982)	WNT11 (ENSECAG00000022188) #14	UVRAG (ENSECAG00000023818) #15	ENSECAG00000018259	ENSECAG00000058058	DGAT2 (ENSECAG00000024847) #16	MOGAT2 (ENSECAG00000025135) #17	MAP6 (ENSECAG00000004615) #18	SERPINH1 (ENSECAG00000004871) #19	GDPD5 (ENSECAG00000010098) #20	KLHL35 (ENSECAG00000013664)	RPS3 (ENSECAG00000013915) #21	ARRB1 (ENSECAG00000017459) #22	SLCO2B1 (ENSECAG00000024423) #23	TPBGL (ENSECAG00000059109)	ENSECAG00000059146	NEU3 (ENSECAG00000006601) #24	SPCS2 (ENSECAG00000007179) #25	XRRA1 (ENSECAG00000007758) #26	RNF169 (ENSECAG00000010781) #27	CHRDL2 (ENSECAG00000011897) #29	POLD3 (ENSECAG00000012624)	LIPT2 (ENSECAG00000017517)	KCNE3 (ENSECAG00000007379) #31	PGM2L1 (ENSECAG00000018803) #32	P4HA3 (ENSECAG00000006917) #34	PPME1 (ENSECAG00000010756) #35	C2CD3 (ENSECAG00000012038) #36
Donkey	MODERN SPECIES	12	TSKU (ENSEASG00005028507) #9	ENSEASG00005014216 #10	LRRC32 (ENSEASG00005014217) #11	EMSY (ENSEASG00005014219) #12	GVQW3 (ENSEASG00005026325) #13	THAP12 (ENSEASG00005014222)	WNT11 (ENSEASG00005014224) #14	UVRAG (ENSEASG00005014226) #15	ENSEASG00005014228 #16	MOGAT2 (ENSEASG00005014230) #17	MAP6 (ENSEASG00005014238) #18	SERPINH1 (ENSEASG00005014240) #19	GDPD5 (ENSEASG00005014243) #20	KLHL35 (ENSEASG00005014246)	RPS3 (ENSEASG00005014248) #21	ARRB1 (ENSEASG00005014253) #22	TPBGL (ENSEASG00005025170)	SLCO2B1 (ENSEASG00005014263) #23	ENSEASG00005035225	ENSEASG00005036702	OR2AT4 (ENSEASG00005014267)	ENSEASG00005017814	NEU3 (ENSEASG00005017815) #24	ENSEASG00005017816 #25	XRRA1 (ENSEASG00005017820) #26	RNF169 (ENSEASG00005038773) #27	CHRDL2 (ENSEASG00005017832) #29	ENSEASG00005017856 #30	LIPT2 (ENSEASG00005017860)	KCNE3 (ENSEASG00005038189) #31	PGM2L1 (ENSEASG00005017865) #32
Carnivora	ANCESTRAL SPECIES	21	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00940000163113	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00910000147753	ENSGT00940000158967 #34
Caniformia	ANCESTRAL SPECIES	17	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Ursidae	ANCESTRAL SPECIES	15	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.a ##21	ENSGT00950000182887.C.a.b #22	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01100000264679	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35	ENSGT00940000154612.m.a.g.b
Ursus	ANCESTRAL SPECIES	36	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.a ##21	ENSGT00950000182887.C.a.b #22	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.`b.a	ENSGT00940000163113	ENSGT00940000162049.ab	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01100000264679	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Polar bear	MODERN SPECIES	302	CAPN5 (ENSUMAG00000011009)	ACER3 (ENSUMAG00000010990) #8	ENSUMAG00000010978 #10	ENSUMAG00000010965 #10	ENSUMAG00000010963 #10	EMSY (ENSUMAG00000010950) #12	GVQW3 (ENSUMAG00000010946) #13	ENSUMAG00000010943	UVRAG (ENSUMAG00000010891) #15	DGAT2 (ENSUMAG00000010859) #16	MOGAT2 (ENSUMAG00000010842) #17	SERPINH1 (ENSUMAG00000010838) #19	GDPD5 (ENSUMAG00000010823) #20	ENSUMAG00000010819	ENSUMAG00000010808 ##21	ARRB1 (ENSUMAG00000010806) #22	SLCO2B1 (ENSUMAG00000010739) #23	ENSUMAG00000010723	OR2AT4 (ENSUMAG00000010718)	ENSUMAG00000010715	NEU3 (ENSUMAG00000010711) #24	SPCS2 (ENSUMAG00000010706) #25	ENSUMAG00000010705 #26	ENSUMAG00000010704 #26	CHRDL2 (ENSUMAG00000010688) #29	ENSUMAG00000010676	KCNE3 (ENSUMAG00000010667) #31	PGM2L1 (ENSUMAG00000010658) #32	P4HA3 (ENSUMAG00000010611) #34	ENSUMAG00000010596	PPME1 (ENSUMAG00000010578) #35
American black bear	MODERN SPECIES	2424																ARRB1 (ENSUAMG00000018490) #22	SLCO2B1 (ENSUAMG00000018492) #23
Giant Panda	MODERN SPECIES	18	TSKU (ENSAMEG00000020283) #9	ENSAMEG00000016872 #10	LRRC32 (ENSAMEG00000016910) #11	EMSY (ENSAMEG00000016911) #12	GVQW3 (ENSAMEG00000020284) #13	THAP12 (ENSAMEG00000016926)	WNT11 (ENSAMEG00000016932) #14	UVRAG (ENSAMEG00000016944) #15	DGAT2 (ENSAMEG00000016958) #16	MOGAT2 (ENSAMEG00000016976) #17	MAP6 (ENSAMEG00000016992) #18	SERPINH1 (ENSAMEG00000017004) #19	GDPD5 (ENSAMEG00000017024) #20	KLHL35 (ENSAMEG00000017048)	RPS3 (ENSAMEG00000017051) ##21	ARRB1 (ENSAMEG00000017062) #22	SLCO2B1 (ENSAMEG00000017088) #23	OR2AT4 (ENSAMEG00000020286)	NEU3 (ENSAMEG00000017126) #24	SPCS2 (ENSAMEG00000017127) #25	XRRA1 (ENSAMEG00000017132) #26	RNF169 (ENSAMEG00000017148) #27	CHRDL2 (ENSAMEG00000017149) #29	ENSAMEG00000017155	LIPT2 (ENSAMEG00000017166)	KCNE3 (ENSAMEG00000020287) #31	PGM2L1 (ENSAMEG00000017168) #32	P4HA3 (ENSAMEG00000017190) #34	PPME1 (ENSAMEG00000017200) #35	ENSAMEG00000025260	C2CD3 (ENSAMEG00000017216) #36
Mustelinae	ANCESTRAL SPECIES	25	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35	ENSGT00510000048072 #36
American mink	MODERN SPECIES	6	ENSNVIG00000000562 #10	ENSNVIG00000000546 #10	LRRC32 (ENSNVIG00000000538) #11	EMSY (ENSNVIG00000000431) #12	GVQW3 (ENSNVIG00000000425) #13	ENSNVIG00000000416	WNT11 (ENSNVIG00000000391) #14	UVRAG (ENSNVIG00000000349) #15	DGAT2 (ENSNVIG00000000310) #16	MOGAT2 (ENSNVIG00000000300) #17	MAP6 (ENSNVIG00000000278) #18	SERPINH1 (ENSNVIG00000000240) #19	GDPD5 (ENSNVIG00000000058) #20	KLHL35 (ENSNVIG00000000027)	RPS3 (ENSNVIG00000022524) #21	ARRB1 (ENSNVIG00000022499) #22	TPBGL (ENSNVIG00000022489)	SLCO2B1 (ENSNVIG00000022418) #23	OR2AT4 (ENSNVIG00000022405)	NEU3 (ENSNVIG00000022399) #24	SPCS2 (ENSNVIG00000022377) #25	XRRA1 (ENSNVIG00000022332) #26	RNF169 (ENSNVIG00000022325) #27	CRDL2 (ENSNVIG00000022284) #29	POLD3 (ENSNVIG00000022266)	LIPT2 (ENSNVIG00000022257)	KCNE3 (ENSNVIG00000022255) #31	PGM2L1 (ENSNVIG00000022233) #32	P4HA3 (ENSNVIG00000022190) #34	PPME1 (ENSNVIG00000022146) #35	C2CD3 (ENSNVIG00000022016) #36
Ferret	MODERN SPECIES	294	ACER3 (ENSMPUG00000008559) #8	TSKU (ENSMPUG00000019527) #9	ENSMPUG00000008573 #10	LRRC32 (ENSMPUG00000008762) #11	EMSY (ENSMPUG00000008766) #12	THAP12 (ENSMPUG00000008784)	WNT11 (ENSMPUG00000008789) #14	UVRAG (ENSMPUG00000008808) #15	DGAT2 (ENSMPUG00000008926) #16	MOGAT2 (ENSMPUG00000009005) #17	MAP6 (ENSMPUG00000009054) #18	SERPINH1 (ENSMPUG00000009062) #19	GDPD5 (ENSMPUG00000009066) #20	KLHL35 (ENSMPUG00000009085)	RPS3 (ENSMPUG00000009197) #21	ARRB1 (ENSMPUG00000009213) #22	TPBGL (ENSMPUG00000019529)	SLCO2B1 (ENSMPUG00000009234) #23	OR2AT4 (ENSMPUG00000019531)	NEU3 (ENSMPUG00000009248) #24	SPCS2 (ENSMPUG00000009261) #25	XRRA1 (ENSMPUG00000009266) #26	RNF169 (ENSMPUG00000009279) #27	CHRDL2 (ENSMPUG00000009291) #29	POLD3 (ENSMPUG00000009299)	LIPT2 (ENSMPUG00000009304)	KCNE3 (ENSMPUG00000019533) #31	PGM2L1 (ENSMPUG00000009319) #32	P4HA3 (ENSMPUG00000009330) #34	PPME1 (ENSMPUG00000009348) #35	C2CD3 (ENSMPUG00000009422) #36
Canidae	ANCESTRAL SPECIES	17	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Canis_lupus	ANCESTRAL SPECIES	21	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.x	ENSGT00940000163113	ENSGT00940000162049.w	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Dingo	MODERN SPECIES	231																ARRB1 (ENSCAFG00020001583) #22	TPBGL (ENSCAFG00020001595)	SLCO2B1 (ENSCAFG00020001612) #23	ENSCAFG00020001631	OR2AT4 (ENSCAFG00020001640)	ENSCAFG00020001644	NEU3 (ENSCAFG00020001651) #24	SPCS2 (ENSCAFG00020001665) #25	XRRA1 (ENSCAFG00020001674) #26	RNF169 (ENSCAFG00020001748) #27	CHRDL2 (ENSCAFG00020001765) #29	POLD3 (ENSCAFG00020001837)	LIPT2 (ENSCAFG00020001852)	KCNE3 (ENSCAFG00020001859) #31	PGM2L1 (ENSCAFG00020001866) #32	P4HA3 (ENSCAFG00020001895) #34
Dog	MODERN SPECIES	13	ENSCAFG00845010554 #10	ENSCAFG00845010588 #10	ENSCAFG00845010608	LRRC32 (ENSCAFG00845010636) #11	GVQW3 (ENSCAFG00845010675) #13	THAP12 (ENSCAFG00845010711)	WNT11 (ENSCAFG00845010773) #14	UVRAG (ENSCAFG00845010859) #15	DGAT2 (ENSCAFG00845011120) #16	MOGAT2 (ENSCAFG00845011232) #17	MAP6 (ENSCAFG00845011305) #18	SERPINH1 (ENSCAFG00845011365) #19	GDPD5 (ENSCAFG00845011562) #20	KLHL35 (ENSCAFG00845011797)	RPS3 (ENSCAFG00845011844) #21	ARRB1 (ENSCAFG00845011997) #22	ENSCAFG00845012257	SLCO2B1 (ENSCAFG00845012322) #23	ENSCAFG00845012420	OR2AT2B (ENSCAFG00845012435)	OR2AT2 (ENSCAFG00845012453)	NEU3 (ENSCAFG00845006035) #24	SPCS2 (ENSCAFG00845006071) #25	XRRA1 (ENSCAFG00845006118) #26	RNF169 (ENSCAFG00845006177) #27	CHRDL2 (ENSCAFG00845006210) #29	ENSCAFG00845006319	LIPT2 (ENSCAFG00845006375)	KCNE3 (ENSCAFG00845006390) #31	PGM2L1 (ENSCAFG00845006417) #32	P4HA3 (ENSCAFG00845006494) #34
Red fox	MODERN SPECIES	81	ENSVVUG00000024295 #10	LRRC32 (ENSVVUG00000024297) #11	ENSVVUG00000024300	EMSY (ENSVVUG00000024307) #12	GVQW3 (ENSVVUG00000024331) #13	THAP12 (ENSVVUG00000024332)	WNT11 (ENSVVUG00000024336) #14	UVRAG (ENSVVUG00000024337) #15	DGAT2 (ENSVVUG00000024339) #16	MOGAT2 (ENSVVUG00000024340) #17	MAP6 (ENSVVUG00000024341) #18	SERPINH1 (ENSVVUG00000024343) #19	GDPD5 (ENSVVUG00000024349) #20	KLHL35 (ENSVVUG00000024352)	RPS3 (ENSVVUG00000024353) #21	ARRB1 (ENSVVUG00000024357) #22	SLCO2B1 (ENSVVUG00000024363) #23	ENSVVUG00000024368	OR2AT4 (ENSVVUG00000024372)	ENSVVUG00000024373	NEU3 (ENSVVUG00000024375) #24	SPCS2 (ENSVVUG00000024376) #25	XRRA1 (ENSVVUG00000024378) #26	RNF169 (ENSVVUG00000024386) #27	CHRDL2 (ENSVVUG00000024393) #29	POLD3 (ENSVVUG00000024403)	LIPT2 (ENSVVUG00000024412)	KCNE3 (ENSVVUG00000024415) #31	PGM2L1 (ENSVVUG00000024420) #32	P4HA3 (ENSVVUG00000024443) #34	PPME1 (ENSVVUG00000024480) #35
Felidae	ANCESTRAL SPECIES		ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00910000147753	ENSGT00940000158967 #34
Panthera	ANCESTRAL SPECIES	23	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00910000147753	ENSGT00940000158967 #34
Panthera_a	ANCESTRAL SPECIES	24	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00910000147753	ENSGT00940000158967 #34
leopard	MODERN SPECIES	17	ENSPPRG00000012568 #10	ENSPPRG00000013613 #10	LRRC32 (ENSPPRG00000014260) #11	EMSY (ENSPPRG00000004765) #12	GVQW3 (ENSPPRG00000018362) #13	THAP12 (ENSPPRG00000005378)	WNT11 (ENSPPRG00000006331) #14	UVRAG (ENSPPRG00000007658) #15	DGAT2 (ENSPPRG00000009451) #16	MOGAT2 (ENSPPRG00000009822) #17	ENSPPRG00000010162 #18	SERPINH1 (ENSPPRG00000010542) #19	GDPD5 (ENSPPRG00000014276) #20	KLHL35 (ENSPPRG00000016187)	RPS3 (ENSPPRG00000021200) #21	ARRB1 (ENSPPRG00000000797) #22	TPBGL (ENSPPRG00000001225)	SLCO2B1 (ENSPPRG00000002453) #23	ENSPPRG00000018979	NEU3 (ENSPPRG00000004096) #24	SPCS2 (ENSPPRG00000005824) #25	XRRA1 (ENSPPRG00000007628) #26	RNF169 (ENSPPRG00000008146) #27	CHRDL2 (ENSPPRG00000009765) #29	POLD3 (ENSPPRG00000011534)	LIPT2 (ENSPPRG00000012003)	KCNE3 (ENSPPRG00000019344) #31	ENSPPRG00000019374	PGM2L1 (ENSPPRG00000012685) #32	ENSPPRG00000019390	P4HA3 (ENSPPRG00000016087) #34
lion	MODERN SPECIES	10	ENSPLOG00000005358 #10	ENSPLOG00000005376 #10	LRRC32 (ENSPLOG00000005396) #11	EMSY (ENSPLOG00000005554) #12	GVQW3 (ENSPLOG00000005758) #13	THAP12 (ENSPLOG00000005843)	WNT11 (ENSPLOG00000005866) #14	UVRAG (ENSPLOG00000005912) #15	DGAT2 (ENSPLOG00000005990) #16	MOGAT2 (ENSPLOG00000006057) #17	MAP6 (ENSPLOG00000006086) #18	SERPINH1 (ENSPLOG00000006124) #19	GDPD5 (ENSPLOG00000006203) #20	KLHL35 (ENSPLOG00000006330)	RPS3 (ENSPLOG00000006386) #21	ARRB1 (ENSPLOG00000006514) #22	TPBGL (ENSPLOG00000006600)	SLCO2B1 (ENSPLOG00000006678) #23	OR2AT4 (ENSPLOG00000006896)	ENSPLOG00000006910	NEU3 (ENSPLOG00000006924) #24	SPCS2 (ENSPLOG00000006952) #25	XRRA1 (ENSPLOG00000007091) #26	RNF169 (ENSPLOG00000007163) #27	CHRDL2 (ENSPLOG00000007211) #29	POLD3 (ENSPLOG00000007284)	LIPT2 (ENSPLOG00000007304)	KCNE3 (ENSPLOG00000007327) #31	ENSPLOG00000007335	PGM2L1 (ENSPLOG00000007360) #32	P4HA3 (ENSPLOG00000007413) #34
Tiger	MODERN SPECIES	152								ENSPTIG00000020523 #15	DGAT2 (ENSPTIG00000021220) #16	MOGAT2 (ENSPTIG00000005726) #17	ENSPTIG00000007135 #18	ENSPTIG00000007424 #19	GDPD5 (ENSPTIG00000008012) #20	ENSPTIG00000012295	RPS3 (ENSPTIG00000012777) #21	ARRB1 (ENSPTIG00000016095) #22	SLCO2B1 (ENSPTIG00000017944) #23	NEU3 (ENSPTIG00000019876) #24	SPCS2 (ENSPTIG00000002921) #25	XRRA1 (ENSPTIG00000006459) #26	RNF169 (ENSPTIG00000012006) #27	CHRDL2 (ENSPTIG00000013187) #29	POLD3 (ENSPTIG00000016047)	KCNE3 (ENSPTIG00000006865) #31	PGM2L1 (ENSPTIG00000018629) #32	ENSPTIG00000006901	P4HA3 (ENSPTIG00000019317) #34	PPME1 (ENSPTIG00000019950) #35	C2CD3 (ENSPTIG00000006117) #36	UCP3 (ENSPTIG00000010500) #37	UCP2 (ENSPTIG00000011528)
Cat	MODERN SPECIES	241	TSKU (ENSFCAG00000041968) #9	ENSFCAG00000025549 #10	LRRC32 (ENSFCAG00000012007) #11	EMSY (ENSFCAG00000012003) #12	GVQW3 (ENSFCAG00000025300) #13	THAP12 (ENSFCAG00000006764)	WNT11 (ENSFCAG00000025418) #14	UVRAG (ENSFCAG00000022180) #15	DGAT2 (ENSFCAG00000040215) #16	MOGAT2 (ENSFCAG00000004632) #17	MAP6 (ENSFCAG00000023444) #18	SERPINH1 (ENSFCAG00000011944) #19	GDPD5 (ENSFCAG00000011943) #20	KLHL35 (ENSFCAG00000012545)	RPS3 (ENSFCAG00000011942) #21	ARRB1 (ENSFCAG00000011941) #22	SLCO2B1 (ENSFCAG00000011940) #23	OR2AT4 (ENSFCAG00000029673)	ENSFCAG00000036568	NEU3 (ENSFCAG00000033977) #24	SPCS2 (ENSFCAG00000022532) #25	XRRA1 (ENSFCAG00000014638) #26	RNF169 (ENSFCAG00000043917) #27	CHRDL2 (ENSFCAG00000008172) #29	POLD3 (ENSFCAG00000008169)	LIPT2 (ENSFCAG00000005135)	KCNE3 (ENSFCAG00000007946) #31	ENSFCAG00000025621	PGM2L1 (ENSFCAG00000007942) #32	P4HA3 (ENSFCAG00000007938) #34	PPME1 (ENSFCAG00000026344) #35
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00940000163113	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Suina	ANCESTRAL SPECIES	5	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00940000163113	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01100000263806	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Pig	MODERN SPECIES	17	ENSSSCG00000055915 #10	LRRC32 (ENSSSCG00000014869) #11	EMSY (ENSSSCG00000014868) #12	GVQW3 (ENSSSCG00000062483) #13	THAP12 (ENSSSCG00000040639)	WNT11 (ENSSSCG00000022347) #14	UVRAG (ENSSSCG00000028979) #15	DGAT2 (ENSSSCG00000034102) #16	ENSSSCG00000061550 #17	ENSSSCG00000014861 #17	MAP6 (ENSSSCG00000014860) #18	SERPINH1 (ENSSSCG00000039468) #19	GDPD5 (ENSSSCG00000014853) #20	KLHL35 (ENSSSCG00000014854)	RPS3 (ENSSSCG00000014855) #21	ARRB1 (ENSSSCG00000014852) #22	SLCO2B1 (ENSSSCG00000014851) #23	ENSSSCG00000025925	OR2AT4 (ENSSSCG00000023029)	NEU3 (ENSSSCG00000021638) #24	SPCS2 (ENSSSCG00000014850) #25	XRRA1 (ENSSSCG00000021702) #26	RNF169 (ENSSSCG00000021822) #27	CHRDL2 (ENSSSCG00000014843) #29	POLD3 (ENSSSCG00000027506)	LIPT2 (ENSSSCG00000024060)	KCNE3 (ENSSSCG00000029323) #31	ENSSSCG00000042110	PGM2L1 (ENSSSCG00000014838) #32	P4HA3 (ENSSSCG00000014840) #34	PPME1 (ENSSSCG00000020856) #35
Chacoan peccary	MODERN SPECIES	32	TSKU (ENSCWAG00000001407) #9	ENSCWAG00000001431 #10	LRRC32 (ENSCWAG00000001490) #11	EMSY (ENSCWAG00000001547) #12	GVQW3 (ENSCWAG00000001671) #13	THAP12 (ENSCWAG00000001677)	WNT11 (ENSCWAG00000001687) #14	UVRAG (ENSCWAG00000001705) #15	DGAT2 (ENSCWAG00000001740) #16	MOGAT2 (ENSCWAG00000001781) #17	ENSCWAG00000001805 #18	SERPINH1 (ENSCWAG00000001819) #19	GDPD5 (ENSCWAG00000001855) #20	KLHL35 (ENSCWAG00000001904)	RPS3 (ENSCWAG00000001939) #21	ARRB1 (ENSCWAG00000001998) #22	TPBGL (ENSCWAG00000002069)	SLCO2B1 (ENSCWAG00000002081) #23	OR2AT4 (ENSCWAG00000002105)	NEU3 (ENSCWAG00000002122) #24	SPCS2 (ENSCWAG00000002150) #25	XRRA1 (ENSCWAG00000002186) #26	RNF169 (ENSCWAG00000002279) #27	CHRDL2 (ENSCWAG00000002300) #29	ENSCWAG00000002330	LIPT2 (ENSCWAG00000002349)	KCNE3 (ENSCWAG00000002355) #31	PGM2L1 (ENSCWAG00000002367) #32	P4HA3 (ENSCWAG00000002379) #34	PPME1 (ENSCWAG00000002394) #35	ENSCWAG00000002417
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00940000163113	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Camelidae	ANCESTRAL SPECIES	32	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT00970000197259	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00940000163113	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35	ENSGT00510000048072 #36
Arabian camel	MODERN SPECIES	1	ENSCDRG00005004762 #10	LRRC32 (ENSCDRG00005004741) #11	EMSY (ENSCDRG00005004068) #12	GVQW3 (ENSCDRG00005003950) #13	THAP12 (ENSCDRG00005003929)	WNT11 (ENSCDRG00005003887) #14	UVRAG (ENSCDRG00005003820) #15	DGAT2 (ENSCDRG00005003787) #16	ENSCDRG00005003755	MOGAT2 (ENSCDRG00005003678) #17	MAP6 (ENSCDRG00005003550) #18	SERPINH1 (ENSCDRG00005003481) #19	GDPD5 (ENSCDRG00005003371) #20	KLHL35 (ENSCDRG00005003311)	ENSCDRG00005003279 ##21	ARRB1 (ENSCDRG00005003177) #22	SLCO2B1 (ENSCDRG00005003073) #23	ENSCDRG00005002994	OR2AT4 (ENSCDRG00005002973)	NEU3 (ENSCDRG00005002967) #24	SPCS2 (ENSCDRG00005002935) #25	XRRA1 (ENSCDRG00005002862) #26	RNF169 (ENSCDRG00005002806) #27	CHRDL2 (ENSCDRG00005002767) #29	ENSCDRG00005002729 #30	LIPT2 (ENSCDRG00005002708)	KCNE3 (ENSCDRG00005002694) #31	PGM2L1 (ENSCDRG00005002666) #32	P4HA3 (ENSCDRG00005002632) #34	PPME1 (ENSCDRG00005002613) #35	C2CD3 (ENSCDRG00005002561) #36
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.bb	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B.h.b.a #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35	ENSGT00510000048072 #36
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT00610000086173.a.b	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT01010000227694	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.bb	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B.h.b.a #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35	ENSGT00510000048072 #36
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT00610000086173.a.b	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT01010000227694	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.bb	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT01100000263806	ENSGT00390000006450	ENSGT00940000155001.B.h.b.a #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT00610000086173.a.b	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT01010000227694	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.bb	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT01000000221138	ENSGT00940000155001.B.h.b.a #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT00610000086173.a.b	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT01010000227694	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT01010000229934	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01100000263806	ENSGT00390000006450	ENSGT01000000221138	ENSGT00940000155001.B.h.b.a #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35	ENSGT00510000048072 #36
Beluga whale	MODERN SPECIES	2	LRRC32 (ENSDLEG00000003305) #11	EMSY (ENSDLEG00000003214) #12	GVQW3 (ENSDLEG00000003193) #13	THAP12 (ENSDLEG00000003173)	WNT11 (ENSDLEG00000003165) #14	LSM4 (ENSDLEG00000003159)	DGAT2 (ENSDLEG00000003119) #15	MOGAT2 (ENSDLEG00000003103) #17	ENSDLEG00000003098	MAP6 (ENSDLEG00000003085) #18	SERPINH1 (ENSDLEG00000003078) #19	GDPD5 (ENSDLEG00000003060) #20	ENSDLEG00000003043	KLHL35 (ENSDLEG00000003032)	RPS3 (ENSDLEG00000003018) #21	ARRB1 (ENSDLEG00000002976) #22	TPBGL (ENSDLEG00000002963)	SLCO2B1 (ENSDLEG00000002954) #23	NEU3 (ENSDLEG00000002947) #24	ENSDLEG00000002942 #25	ENSDLEG00000002932 #25	ENSDLEG00000002925 #26	XRRA1 (ENSDLEG00000002903) #26	RNF169 (ENSDLEG00000002883) #27	CHRDL2 (ENSDLEG00000002872) #29	POLD3 (ENSDLEG00000002858)	LIPT2 (ENSDLEG00000002850)	ENSDLEG00000002840	KCNE3 (ENSDLEG00000002833) #31	PGM2L1 (ENSDLEG00000002819) #32	P4HA3 (ENSDLEG00000002804) #34
Narwhal	MODERN SPECIES	314	EMSY (ENSMMNG00015019155) #12	GVQW3 (ENSMMNG00015019432) #13	ENSMMNG00015019441	WNT11 (ENSMMNG00015019462) #14	UVRAG (ENSMMNG00015019516) #15	LSM4 (ENSMMNG00015019548)	DGAT2 (ENSMMNG00015019561) #16	MOGAT2 (ENSMMNG00015019582) #17	ENSMMNG00015019612	MAP6 (ENSMMNG00015019635) #18	SERPINH1 (ENSMMNG00015019659) #19	GDPD5 (ENSMMNG00015019694) #20	RPS3 (ENSMMNG00015019776) #21	ENSMMNG00015019811	KLHL35 (ENSMMNG00015019832)	ARRB1 (ENSMMNG00015019886) #22	TPBGL (ENSMMNG00015019934)	SLCO2B1 (ENSMMNG00015019988) #23	NEU3 (ENSMMNG00015020097) #24	ENSMMNG00015020124 #25	XRRA1 (ENSMMNG00015020206) #26	RNF169 (ENSMMNG00015020277) #27	CHRDL2 (ENSMMNG00015020311) #29	ENSMMNG00015020343	LIPT2 (ENSMMNG00015020361)	ENSMMNG00015020370 #31	PGM2L1 (ENSMMNG00015020391) #32	PPME1 (ENSMMNG00015020414) #35	C2CD3 (ENSMMNG00015020457) #36	UCP3 (ENSMMNG00015020523) #37	UCP2 (ENSMMNG00015020552)
Vaquita	MODERN SPECIES	19	ENSPSNG00000005198 #10	LRRC32 (ENSPSNG00000005215) #11	EMSY (ENSPSNG00000005336) #12	GVQW3 (ENSPSNG00000005560) #13	ENSPSNG00000005572	WNT11 (ENSPSNG00000005604) #14	UVRAG (ENSPSNG00000005649) #15	LSM4 (ENSPSNG00000005672)	DGAT2 (ENSPSNG00000005697) #16	MOGAT2 (ENSPSNG00000005741) #17	MAP6 (ENSPSNG00000005782) #18	SERPINH1 (ENSPSNG00000005838) #19	GDPD5 (ENSPSNG00000005980) #20	KLHL35 (ENSPSNG00000006126)	RPS3 (ENSPSNG00000006180) #21	ARRB1 (ENSPSNG00000006320) #22	TPBGL (ENSPSNG00000006486)	SLCO2B1 (ENSPSNG00000006578) #23	ENSPSNG00000006768	ENSPSNG00000006780	NEU3 (ENSPSNG00000006794) #24	ENSPSNG00000006830 #25	XRRA1 (ENSPSNG00000006930) #26	RNF169 (ENSPSNG00000007029) #27	CHRDL2 (ENSPSNG00000007083) #29	POLD3 (ENSPSNG00000007123)	LIPT2 (ENSPSNG00000007174)	ENSPSNG00000007198	ENSPSNG00000007219 #31	PGM2L1 (ENSPSNG00000007242) #32	P4HA3 (ENSPSNG00000007275) #34
Dolphin	MODERN SPECIES	2055													GDPD5 (ENSTTRG00000005863) #20	KLHL35 (ENSTTRG00000005860)	RPS3 (ENSTTRG00000005858) #21	ARRB1 (ENSTTRG00000005853) #22	SLCO2B1 (ENSTTRG00000005843) #23	NEU3 (ENSTTRG00000005836) #24	SPCS2 (ENSTTRG00000005830) #25	XRRA1 (ENSTTRG00000005818) #26	RNF169 (ENSTTRG00000005774) #27	CHRDL2 (ENSTTRG00000005768) #29	POLD3 (ENSTTRG00000005758)	LIPT2 (ENSTTRG00000005752)
Sperm whale	MODERN SPECIES	7	LRRC32 (ENSPCTG00005011094) #11	EMSY (ENSPCTG00005011180) #12	GVQW3 (ENSPCTG00005011668) #13	ENSPCTG00005011685	WNT11 (ENSPCTG00005011701) #14	UVRAG (ENSPCTG00005011757) #15	ENSPCTG00005011854	DGAT2 (ENSPCTG00005011874) #16	MOGAT2 (ENSPCTG00005012047) #17	ENSPCTG00005012145	MAP6 (ENSPCTG00005012178) #18	SERPINH1 (ENSPCTG00005012284) #19	GDPD5 (ENSPCTG00005012361) #20	KLHL35 (ENSPCTG00005012608)	RPS3 (ENSPCTG00005012736) #21	ARRB1 (ENSPCTG00005012837) #22	TPBGL (ENSPCTG00005013251)	SLCO2B1 (ENSPCTG00005013315) #23	ENSPCTG00005014215	NEU3 (ENSPCTG00005014228) #24	SPCS2 (ENSPCTG00005014290) #25	XRRA1 (ENSPCTG00005014504) #26	RNF169 (ENSPCTG00005014594) #27	ENSPCTG00005014677	CHRDL2 (ENSPCTG00005014720) #29	POLD3 (ENSPCTG00005014767)	LIPT2 (ENSPCTG00005014884)	ENSPCTG00005014938	KCNE3 (ENSPCTG00005014974) #31	PGM2L1 (ENSPCTG00005014991) #32	P4HA3 (ENSPCTG00005015054) #34
Blue whale	MODERN SPECIES	19	TSKU (ENSBMSG00010005685) #9	ENSBMSG00010005705 #10	LRRC32 (ENSBMSG00010005727) #11	EMSY (ENSBMSG00010005898) #12	GVQW3 (ENSBMSG00010006350) #13	THAP12 (ENSBMSG00010006359)	WNT11 (ENSBMSG00010006371) #14	UVRAG (ENSBMSG00010006403) #15	DGAT2 (ENSBMSG00010006424) #16	MOGAT2 (ENSBMSG00010006441) #17	MAP6 (ENSBMSG00010006468) #18	SERPINH1 (ENSBMSG00010006487) #19	GDPD5 (ENSBMSG00010006559) #20	RPS3 (ENSBMSG00010006696) #21	KLHL35 (ENSBMSG00010006735)	ARRB1 (ENSBMSG00010006812) #22	TPBGL (ENSBMSG00010006875)	SLCO2B1 (ENSBMSG00010006926) #23	ENSBMSG00010007056	ENSBMSG00010007063	NEU3 (ENSBMSG00010007095) #24	ENSBMSG00010007104 #25	XRRA1 (ENSBMSG00010007133) #26	RNF169 (ENSBMSG00010007157) #27	CHRDL2 (ENSBMSG00010007185) #29	POLD3 (ENSBMSG00010007215)	LIPT2 (ENSBMSG00010007226)	ENSBMSG00010007235 #31	PGM2L1 (ENSBMSG00010007245) #32	ENSBMSG00010007257	P4HA3 (ENSBMSG00010013836) #34
Pecora	ANCESTRAL SPECIES	7	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00440000033232.d #13	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b.g.b.a.a.b #17	ENSGT00970000197259	ENSGT01030000234582.e.b.h #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00940000163113	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Percora_a	ANCESTRAL SPECIES	6	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b.g.a.b #17	ENSGT01030000234582.e.b.g.a.a #17	ENSGT01030000234582.e.b.g.b.a.a.b #17	ENSGT01030000234582.e.b.g.b.a.a.a.a.b #17	ENSGT00970000197259	ENSGT01030000234582.e.b.h #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01100000263806	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Bovidae	ANCESTRAL SPECIES	6	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b.g.a.b #17	ENSGT01030000234582.e.b.g.a.a #17	ENSGT01030000234582.e.b.g.b.a.a.b #17	ENSGT01030000234582.e.b.g.b.a.a.a.a.b #17	ENSGT00970000197259	ENSGT01030000234582.e.b.h #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01100000263806	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Caprinae	ANCESTRAL SPECIES	6	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b.g.a.b #17	ENSGT01030000234582.e.b.g.b.a.a.b #17	ENSGT01030000234582.e.b.g.b.a.a.a.a.a.a #17	ENSGT01030000234582.e.b.g.b.a.b #17	ENSGT01030000234582.e.b.g.b.b #17	ENSGT01030000234582.e.b.h #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01100000263806	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Rambouillet Sheep	MODERN SPECIES	6	ENSOARG00020005727	ENSOARG00020005653	UVRAG (ENSOARG00020005557) #15	DGAT2 (ENSOARG00020005462) #16	ENSOARG00020005412 #17	ENSOARG00020005345 #17	ENSOARG00020005318 #17	ENSOARG00020005275 #17	ENSOARG00020005200 #17	MOGAT2 (ENSOARG00020005152) #17	SERPINH1 (ENSOARG00020005114) #19	ENSOARG00020005102	GDPD5 (ENSOARG00020004944) #20	KLHL35 (ENSOARG00020004876)	RPS3 (ENSOARG00020004797) #21	ARRB1 (ENSOARG00020004714) #22	TPBGL (ENSOARG00020004687)	ENSOARG00020004670	ENSOARG00020004648	OR2AT4 (ENSOARG00020004633)	ENSOARG00020004621	SLCO2B1 (ENSOARG00020004500) #23	NEU3 (ENSOARG00020004457) #24	SPCS2 (ENSOARG00020004400) #25	XRRA1 (ENSOARG00020004106) #26	RNF169 (ENSOARG00020004047) #27	CHRDL2 (ENSOARG00020003968) #29	POLD3 (ENSOARG00020003908)	LIPT2 (ENSOARG00020003884)	KCNE3 (ENSOARG00020003867) #31	PGM2L1 (ENSOARG00020003843) #32
Goat	MODERN SPECIES	6	ENSCHIG00000008621	WNT11 (ENSCHIG00000021782) #14	UVRAG (ENSCHIG00000025967) #15	DGAT2 (ENSCHIG00000010320) #16	ENSCHIG00000015313 #17	ENSCHIG00000025677 #17	ENSCHIG00000016227 #17	ENSCHIG00000017465 #17	ENSCHIG00000016754 #17	ENSCHIG00000022165 #17	MAP6 (ENSCHIG00000023796) #18	SERPINH1 (ENSCHIG00000002757) #19	GDPD5 (ENSCHIG00000014683) #20	KLHL35 (ENSCHIG00000024312)	RPS3 (ENSCHIG00000012342) #21	ARRB1 (ENSCHIG00000013620) #22	SLCO2B1 (ENSCHIG00000008646) #23	OR2AT4 (ENSCHIG00000006169)	ENSCHIG00000005983	NEU3 (ENSCHIG00000025082) #24	SPCS2 (ENSCHIG00000010577) #25	XRRA1 (ENSCHIG00000022337) #26	RNF169 (ENSCHIG00000006555) #27	CHRDL2 (ENSCHIG00000015102) #29	ENSCHIG00000023669	LIPT2 (ENSCHIG00000023926)	ENSCHIG00000008399	KCNE3 (ENSCHIG00000004672) #31	PGM2L1 (ENSCHIG00000025872) #32	P4HA3 (ENSCHIG00000021364) #34	PPME1 (ENSCHIG00000013753) #35
Bovinae	ANCESTRAL SPECIES	26	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b.g.a.b #17	ENSGT01030000234582.e.b.g.a.a #17	ENSGT01030000234582.e.b.g.b.a.a.b #17	ENSGT00390000007473.d	ENSGT01030000234582.e.b.g.b.a.a.a.a.a.a #17	ENSGT01030000234582.e.b.g.b.a.b #17	ENSGT01030000234582.e.b.g.b.b #17	ENSGT01030000234582.e.b.h #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT01100000263806	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35	ENSGT00510000048072 #36
Bos	ANCESTRAL SPECIES	25	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b.g.a.b #17	ENSGT01030000234582.e.b.g.a.a #17	ENSGT01030000234582.e.b.g.b.a.a.b #17	ENSGT00390000007473.d	ENSGT01030000234582.e.b.g.b.a.a.a.a.a.a #17	ENSGT01030000234582.e.b.g.b.a.b #17	ENSGT01030000234582.e.b.g.b.b #17	ENSGT01030000234582.e.b.h #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT01100000263481.n.a.b.b.a.b.a.a.a.b	ENSGT00940000161241 #29	ENSGT01100000263806	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Bos_b	ANCESTRAL SPECIES	40				ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b.g.a.b #17	ENSGT01030000234582.e.b.g.b.a.a.b #17	ENSGT01030000234582.e.b.g.b.a.a.a.a.b #17	ENSGT01030000234582.e.b.g.b.b #17	ENSGT00970000197259	ENSGT01030000234582.e.b.h #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT01100000263481.n.a.b.b.a.b.a.a.a.b	ENSGT00940000161241 #29	ENSGT01100000263806	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Hybrid Bos Indicus	MODERN SPECIES	6	DGAT2 (ENSBIXG00005011065) #16	ENSBIXG00005010986 #17	ENSBIXG00005010977	ENSBIXG00005010950 #17	ENSBIXG00005010939	ENSBIXG00005005811 #17	ENSBIXG00005010894	ENSBIXG00005010874 #17	ENSBIXG00005010772 #17	ENSBIXG00005010753	MAP6 (ENSBIXG00005001586) #18	SERPINH1 (ENSBIXG00005001605) #19	GDPD5 (ENSBIXG00005029191) #20	KLHL35 (ENSBIXG00005001838)	RPS3 (ENSBIXG00005005177) #21	ARRB1 (ENSBIXG00005001993) #22	TPBGL (ENSBIXG00005005103)	SLCO2B1 (ENSBIXG00005028960) #23	NEU3 (ENSBIXG00005028847) #24	SPCS2 (ENSBIXG00005002321) #25	XRRA1 (ENSBIXG00005004977) #26	RNF169 (ENSBIXG00005028615) #27	ENSBIXG00005028580	CHRDL2 (ENSBIXG00005028567) #29	ENSBIXG00005004912	LIPT2 (ENSBIXG00005002463)	KCNE3 (ENSBIXG00005028481) #31	PGM2L1 (ENSBIXG00005028456) #32	P4HA3 (ENSBIXG00005004876) #34	PPME1 (ENSBIXG00005028331) #35	C2CD3 (ENSBIXG00005028267) #36
Cow	MODERN SPECIES	6	THAP12 (ENSBTAG00000031609)	WNT11 (ENSBTAG00000010820) #14	UVRAG (ENSBTAG00000016355) #15	MOGAT2 (ENSBTAG00000037483) #17	ENSBTAG00000052936	ENSBTAG00000015091 #17	ENSBTAG00000017443 #17	ENSBTAG00000047111 #17	ENSBTAG00000053794	MOGAT2 (ENSBTAG00000049519) #17	MAP6 (ENSBTAG00000001028) #18	SERPINH1 (ENSBTAG00000001027) #19	GDPD5 (ENSBTAG00000031777) #20	KLHL35 (ENSBTAG00000015087)	RPS3 (ENSBTAG00000005620) #21	ARRB1 (ENSBTAG00000020485) #22	TPBGL (ENSBTAG00000019622)	SLCO2B1 (ENSBTAG00000015596) #23	ENSBTAG00000048088	OR2AT2C (ENSBTAG00000047344)	NEU3 (ENSBTAG00000025931) #24	SPCS2 (ENSBTAG00000006644) #25	XRRA1 (ENSBTAG00000006610) #26	ENSBTAG00000054207	RNF169 (ENSBTAG00000000727) #27	CHRDL2 (ENSBTAG00000021306) #29	POLD3 (ENSBTAG00000016869)	LIPT2 (ENSBTAG00000008227)	KCNE3 (ENSBTAG00000011873) #31	PGM2L1 (ENSBTAG00000000770) #32	ENSBTAG00000027610
Bos_a	ANCESTRAL SPECIES	44									ENSGT00970000197259	ENSGT01030000234582.e.b.h #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT01100000263481.n.a.b.b.a.b.a.a.a.b	ENSGT00940000161241 #29	ENSGT01100000263806	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Wild yak	MODERN SPECIES	1503										ENSBMUG00000004128 #17	MAP6 (ENSBMUG00000004069) #18	SERPINH1 (ENSBMUG00000004021) #19	GDPD5 (ENSBMUG00000003936) #20	KLHL35 (ENSBMUG00000003800)	RPS3 (ENSBMUG00000003751) #21	ARRB1 (ENSBMUG00000003695) #22	SLCO2B1 (ENSBMUG00000003583) #23	ENSBMUG00000003492	ENSBMUG00000003483	OR2AT4 (ENSBMUG00000003471)	ENSBMUG00000003461	NEU3 (ENSBMUG00000003443) #24	SPCS2 (ENSBMUG00000003427) #25	XRRA1 (ENSBMUG00000003408) #26	RNF169 (ENSBMUG00000003301) #27	CHRDL2 (ENSBMUG00000003270) #29	ENSBMUG00000003228	LIPT2 (ENSBMUG00000003209)	KCNE3 (ENSBMUG00000003174) #31	PGM2L1 (ENSBMUG00000003154) #32	ENSBMUG00000003135
Domestic yak	MODERN SPECIES	4	ENSBGRG00000022314	ENSBGRG00000022324	ENSBGRG00000022353	ENSBGRG00000022382	OR4C12 (ENSBGRG00000022476)	ENSBGRG00000022491	ENSBGRG00000022520	ENSBGRG00000022742	ENSBGRG00000022758	ENSBGRG00000022776 #17	ENSBGRG00000022851 #18	SERPINH1 (ENSBGRG00000022881) #19	GDPD5 (ENSBGRG00000022949) #20	KLHL35 (ENSBGRG00000023155)	RPS3 (ENSBGRG00000023214) #21	ARRB1 (ENSBGRG00000023441) #22	TPBGL (ENSBGRG00000023837)	SLCO2B1 (ENSBGRG00000023872) #23	ENSBGRG00000024166	ENSBGRG00000024185	OR2AT4 (ENSBGRG00000024199)	ENSBGRG00000024218	NEU3 (ENSBGRG00000024225) #24	SPCS2 (ENSBGRG00000024243) #25	XRRA1 (ENSBGRG00000024307) #26	RNF169 (ENSBGRG00000024385) #27	ENSBGRG00000024433	CHRDL2 (ENSBGRG00000024469) #29	ENSBGRG00000024546	LIPT2 (ENSBGRG00000024650)	KCNE3 (ENSBGRG00000024658) #31
American bison	MODERN SPECIES	3168	ENSBBBG00000023136 #17	ENSBBBG00000023116 #17	ENSBBBG00000023102	ENSBBBG00000006061	ENSBBBG00000006059 #17	ENSBBBG00000023080	ENSBBBG00000023075 #17	ENSBBBG00000023073 #17	ENSBBBG00000023066 #17	ENSBBBG00000023058 #17	MAP6 (ENSBBBG00000023028) #18	SERPINH1 (ENSBBBG00000022977) #19	GDPD5 (ENSBBBG00000022948) #20	ENSBBBG00000022826	RPS3 (ENSBBBG00000022815) #21	ARRB1 (ENSBBBG00000022736) #22	TPBGL (ENSBBBG00000005974)	SLCO2B1 (ENSBBBG00000005968) #23	ENSBBBG00000022561	OR2AT4 (ENSBBBG00000022555)	ENSBBBG00000022551	NEU3 (ENSBBBG00000022546) #24
Siberian musk deer	MODERN SPECIES	1173							ENSMMSG00000009931 #17	ENSMMSG00000010002 #17	ENSMMSG00000010044	ENSMMSG00000010080 #17	ENSMMSG00000010133 #18	ENSMMSG00000010185 #19	GDPD5 (ENSMMSG00000010257) #20	KLHL35 (ENSMMSG00000010389)	RPS3 (ENSMMSG00000010456) #21	ARRB1 (ENSMMSG00000010638) #22	TPBGL (ENSMMSG00000010742)	SLCO2B1 (ENSMMSG00000010784) #23	ENSMMSG00000011132	OR2AT4 (ENSMMSG00000011148)	NEU3 (ENSMMSG00000011174) #24	ENSMMSG00000011190 #25	XRRA1 (ENSMMSG00000011230) #26	RNF169 (ENSMMSG00000011474) #27	CHRDL2 (ENSMMSG00000011519) #29	ENSMMSG00000011605	LIPT2 (ENSMMSG00000011677)	KCNE3 (ENSMMSG00000011690) #31	PGM2L1 (ENSMMSG00000011704) #32	P4HA3 (ENSMMSG00000011730) #34	PPME1 (ENSMMSG00000011768) #35
Yarkand deer	MODERN SPECIES		WNT11 (ENSCHYG00000004966) #14	UVRAG (ENSCHYG00000004806) #15	DGAT2 (ENSCHYG00000004776) #16	ENSCHYG00000004726 #17	ENSCHYG00000004707	ENSCHYG00000004698 #17	ENSCHYG00000004687 #17	ENSCHYG00000004681	ENSCHYG00000004657 #17	ENSCHYG00000004593 #17	MAP6 (ENSCHYG00000004581) #18	SERPINH1 (ENSCHYG00000004527) #19	GDPD5 (ENSCHYG00000004461) #20	KLHL35 (ENSCHYG00000004438)	RPS3 (ENSCHYG00000004407) #21	ARRB1 (ENSCHYG00000004204) #22	TPBGL (ENSCHYG00000004162)	SLCO2B1 (ENSCHYG00000004067) #23	ENSCHYG00000004045	ENSCHYG00000004041	OR2AT4 (ENSCHYG00000004032)	ENSCHYG00000004026	NEU3 (ENSCHYG00000004022) #24	ENSCHYG00000004004 #25	XRRA1 (ENSCHYG00000003983) #26	RNF169 (ENSCHYG00000003956) #27	CHRDL2 (ENSCHYG00000003936) #29	POLD3 (ENSCHYG00000003916)	LIPT2 (ENSCHYG00000003910)	KCNE3 (ENSCHYG00000003907) #31	PGM2L1 (ENSCHYG00000003778) #32
Atlantogenata	ANCESTRAL SPECIES	35	ENSGT00940000163174 #7	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.b	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT01060000248648	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Afrotheria	ANCESTRAL SPECIES	41	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.c.a	ENSGT00530000063516.a.a.d	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Afrotheria_a	ANCESTRAL SPECIES	71	ENSGT00940000163174 #7	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.d	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000163113	ENSGT00940000162049	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Elephant	MODERN SPECIES	563	B3GNT6 (ENSLAFG00000002020) #7	TSKU (ENSLAFG00000010654) #9	ENSLAFG00000030179 #10	LRRC32 (ENSLAFG00000017456) #11	EMSY (ENSLAFG00000011748) #12	THAP12 (ENSLAFG00000011743)	WNT11 (ENSLAFG00000011379) #14	ENSLAFG00000016634 #15	DGAT2 (ENSLAFG00000003799) #16	MOGAT2 (ENSLAFG00000011173) #17	MAP6 (ENSLAFG00000003783) #18	SERPINH1 (ENSLAFG00000003780) #19	GDPD5 (ENSLAFG00000001164) #20	KLHL35 (ENSLAFG00000021869)	RPS3 (ENSLAFG00000004297) #21	ARRB1 (ENSLAFG00000022589) #22	TPBGL (ENSLAFG00000026034)	SLCO2B1 (ENSLAFG00000018182) #23	ENSLAFG00000026542	ENSLAFG00000029633	ENSLAFG00000026465	OR2AT4 (ENSLAFG00000022125)	ENSLAFG00000031826	NEU3 (ENSLAFG00000016015) #24	SPCS2 (ENSLAFG00000005996) #25	XRRA1 (ENSLAFG00000005994) #26	RNF169 (ENSLAFG00000005991) #27	CHRDL2 (ENSLAFG00000009783) #29	ENSLAFG00000004098 #30	LIPT2 (ENSLAFG00000012749)	KCNE3 (ENSLAFG00000022215) #31
Hyrax	MODERN SPECIES	10760																ARRB1 (ENSPCAG00000005279) #22
Xenarthra	ANCESTRAL SPECIES	655											ENSGT00530000063947.C #18	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23
Sloth	MODERN SPECIES	3027																ENSCHOG00000009094 #22
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	4253	PPP2R1B (ENSDNOG00000006743)	SIK2 (ENSDNOG00000006715)	ENSDNOG00000034901	HOATZ (ENSDNOG00000049033)	BTG4 (ENSDNOG00000015793)	ENSDNOG00000032776	POU2AF1 (ENSDNOG00000049279)	POU2AF3 (ENSDNOG00000023573)	POU2AF2 (ENSDNOG00000018153)	ENSDNOG00000034430	ARHGAP20 (ENSDNOG00000038276)	ENSDNOG00000035868	ENSDNOG00000036477	RDX (ENSDNOG00000019413)	ZC3H12C (ENSDNOG00000013040)	ENSDNOG00000045895 #22	C11orf87 (ENSDNOG00000035507)	ENSDNOG00000038704	ENSDNOG00000049579
Armadillo	MODERN SPECIES	1116													ENSDNOG00000032746 #20	KLHL35 (ENSDNOG00000019775)	RPS3 (ENSDNOG00000037189) #21	ARRB1 (ENSDNOG00000040731) #22	TPBGL (ENSDNOG00000048757)	SLCO2B1 (ENSDNOG00000031967) #23
Marsupialia	ANCESTRAL SPECIES	28	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT01100000263754	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.xb	ENSGT00940000162049.yb	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Opossum	DUPLICATION
Opossum	MODERN SPECIES	3	ENSMODG00000002010	TFG (ENSMODG00000002082)	ENSMODG00000002093	TMEM45A (ENSMODG00000025555)	ENSMODG00000028846	TOMM70 (ENSMODG00000002158)	NIT2 (ENSMODG00000002171)	TBC1D23 (ENSMODG00000002218)	ENSMODG00000002224	CMSS1 (ENSMODG00000002275)	FILIP1L (ENSMODG00000002287)	ENSMODG00000048675	COL8A1 (ENSMODG00000046046)	ENSMODG00000047195	ENSMODG00000037510	ENSMODG00000002343 #22	DCBLD2 (ENSMODG00000002360)	ST3GAL6 (ENSMODG00000002374)	ENSMODG00000028440	ENSMODG00000002417	TASL (ENSMODG00000025153)	ENSMODG00000002426	ENSMODG00000051378	ENSMODG00000043525	CD47 (ENSMODG00000018045)	IFT57 (ENSMODG00000018047)	ENSMODG00000029273	ENSMODG00000018072	ENSMODG00000025588	RETNLB (ENSMODG00000018074)	TRAT1 (ENSMODG00000041118)
Opossum	MODERN SPECIES	3	ENSMODG00000002794	ENSMODG00000045523	ENSMODG00000002815	UVRAG (ENSMODG00000006698) #15	ENSMODG00000006703	DGAT2 (ENSMODG00000006739) #16	ENSMODG00000006756 #17	ENSMODG00000043186 #18	ENSMODG00000038222	SERPINH1 (ENSMODG00000006814) #19	ENSMODG00000045071 #20	ENSMODG00000006862 #20	KLHL35 (ENSMODG00000006983)	RPS3 (ENSMODG00000006945) #21	ENSMODG00000024030	ARRB1 (ENSMODG00000007021) #22	ENSMODG00000007031	SLCO2B1 (ENSMODG00000007051) #23	ENSMODG00000007063	ENSMODG00000024027	ENSMODG00000029536	ENSMODG00000049054	ENSMODG00000007071	ENSMODG00000036612	NEU3 (ENSMODG00000039572) #24	SPCS2 (ENSMODG00000042403) #25	XRRA1 (ENSMODG00000007151) #26	RNF169 (ENSMODG00000007163) #27	CHRDL2 (ENSMODG00000007176) #29	ENSMODG00000007196	LIPT2 (ENSMODG00000007202)
Marsupialia_b	ANCESTRAL SPECIES	20	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT01100000263754	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.xb	ENSGT00940000162049.yb	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Diprotodontia	ANCESTRAL SPECIES	24	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.e.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT01100000263754	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.xb	ENSGT00940000162049.yb	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Diprotodontia_a	ANCESTRAL SPECIES	25	ENSGT00940000160984 #9	ENSGT00940000162702 #10	ENSGT00940000162288 #11	ENSGT00390000009554 #12	ENSGT00530000063516.a.a.e.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT01100000263754	ENSGT00940000156163 #19	ENSGT00940000159690 #20	ENSGT00940000161093	ENSGT00390000008610.a.b.a.b #21	ENSGT00950000182887.C.a.b #22	ENSGT00940000163536	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049.xb.d	ENSGT00940000162049.xb.c	ENSGT00940000162049.yb	ENSGT00950000182944.A #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000158967 #34
Common wonbat	MODERN SPECIES	342	ENSVURG00010016875 #10	LRRC32 (ENSVURG00010016917) #11	EMSY (ENSVURG00010016923) #12	ENSVURG00010016926	ENSVURG00010016929	WNT11 (ENSVURG00010016934) #14	UVRAG (ENSVURG00010016946) #15	DGAT2 (ENSVURG00010016956) #16	MOGAT2 (ENSVURG00010016965) #17	ENSVURG00010016973 #18	ENSVURG00010016983	SERPINH1 (ENSVURG00010016989) #19	GDPD5 (ENSVURG00010017005) #20	ENSVURG00010017014	ENSVURG00010017023 #21	ARRB1 (ENSVURG00010017049) #22	TPBGL (ENSVURG00010017080)	SLCO2B1 (ENSVURG00010017093) #23	ENSVURG00010017115	ENSVURG00010017123	ENSVURG00010017126	NEU3 (ENSVURG00010017132) #24	XRRA1 (ENSVURG00010017136) #26	ENSVURG00010017157 #27	CHRDL2 (ENSVURG00010017166) #29	ENSVURG00010017183	LIPT2 (ENSVURG00010017202)	KCNE3 (ENSVURG00010017220) #31	PGM2L1 (ENSVURG00010017230) #32	P4HA3 (ENSVURG00010017249) #34	PPME1 (ENSVURG00010017299) #35
koala	MODERN SPECIES	35	LRRC32 (ENSPCIG00000011397) #11	EMSY (ENSPCIG00000011389) #12	ENSPCIG00000011376	ENSPCIG00000011379	WNT11 (ENSPCIG00000011373) #14	UVRAG (ENSPCIG00000009778) #15	DGAT2 (ENSPCIG00000009770) #16	MOGAT2 (ENSPCIG00000009767) #17	ENSPCIG00000009766 #18	ENSPCIG00000009765	SERPINH1 (ENSPCIG00000031151) #19	ENSPCIG00000031819 #20	ENSPCIG00000024154 #20	KLHL35 (ENSPCIG00000024150)	ENSPCIG00000024144 #21	ARRB1 (ENSPCIG00000024137) #22	ENSPCIG00000024142	SLCO2B1 (ENSPCIG00000024128) #23	ENSPCIG00000024125	ENSPCIG00000024126	ENSPCIG00000021843	NEU3 (ENSPCIG00000021841) #24	SPCS2 (ENSPCIG00000021840) #25	ENSPCIG00000021835 #26	CHRDL2 (ENSPCIG00000021833) #29	ENSPCIG00000021832 #30	LIPT2 (ENSPCIG00000021831)	KCNE3 (ENSPCIG00000021830) #31	PGM2L1 (ENSPCIG00000021827) #32	P4HA3 (ENSPCIG00000021825) #34	PPME1 (ENSPCIG00000021824) #35
Wallaby	MODERN SPECIES	11738																ARRB1 (ENSMEUG00000008613) #22
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000025079 #10	LRRC32 (ENSSHAG00000007473) #11	ENSSHAG00000009255 #12	ENSSHAG00000031959 #12	THAP12 (ENSSHAG00000027613)	WNT11 (ENSSHAG00000010411) #14	UVRAG (ENSSHAG00000029637) #15	DGAT2 (ENSSHAG00000031450) #16	MOGAT2 (ENSSHAG00000001147) #17	ENSSHAG00000021367 #18	ENSSHAG00000024198	SERPINH1 (ENSSHAG00000009364) #19	GDPD5 (ENSSHAG00000009805) #20	ENSSHAG00000010962	ENSSHAG00000011198 ##21	ARRB1 (ENSSHAG00000012018) #22	ENSSHAG00000012502	SLCO2B1 (ENSSHAG00000003701) #23	ENSSHAG00000001456	ENSSHAG00000003923	ENSSHAG00000021653 #24	SPCS2 (ENSSHAG00000005389) #25	XRRA1 (ENSSHAG00000006643) #26	RNF169 (ENSSHAG00000032266) #27	CHRDL2 (ENSSHAG00000008806) #29	ENSSHAG00000010021 #30	LIPT2 (ENSSHAG00000026717)	KCNE3 (ENSSHAG00000023197) #31	PGM2L1 (ENSSHAG00000011567) #32	P4HA3 (ENSSHAG00000012092) #34	PPME1 (ENSSHAG00000012353) #35
Platypus	MODERN SPECIES	11	INPPL1 (ENSOANG00000010026)	ENSOANG00000040848	CLPB (ENSOANG00000008149)	ENSOANG00000013753	ENSOANG00000005516	ENSOANG00000003846	ENSOANG00000005326	ENSOANG00000008114	ENSOANG00000043749	ENSOANG00000015107	PDE2A (ENSOANG00000009297)	ENSOANG00000015978	ARAP1 (ENSOANG00000011819)	STARD10 (ENSOANG00000038761)	ENSOANG00000042170	ENSOANG00000038513 #22	ENSOANG00000042925	ENSOANG00000040585 #23	NEU3 (ENSOANG00000039167) #24	SPCS2 (ENSOANG00000042616) #25	ENSOANG00000038765 #26	ENSOANG00000050252 #27	CHRDL2 (ENSOANG00000015335) #29	ENSOANG00000046791 #30	LIPT2 (ENSOANG00000046240)	KCNE3 (ENSOANG00000010596) #31	PGM2L1 (ENSOANG00000011419) #32	MRPS35 (ENSOANG00000010504)	PTHLH (ENSOANG00000002270)	CCDC91 (ENSOANG00000041500)	FAR2 (ENSOANG00000006583)
Sauria	ANCESTRAL SPECIES	44	ENSGT00960000190355	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692	ENSGT00940000159817	ENSGT00960000190186	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701
Archelosauria	ANCESTRAL SPECIES		ENSGT00960000190355	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692	ENSGT00940000159817	ENSGT00960000190186	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000162049	ENSGT01080000257336.a.c.a #23	ENSGT00940000154868.b	ENSGT00940000158353 #32	ENSGT00940000155001.B #31	ENSGT00390000006450	ENSGT00940000163239 #30	ENSGT00940000161241 #29	ENSGT00940000153680.b #27	ENSGT00390000016048 #26	ENSGT00960000189590	ENSGT00440000038181 #25	ENSGT00950000182944.A #24	ENSGT00940000158967 #34
Cryptodira	ANCESTRAL SPECIES											ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000157424	ENSGT00940000174692	ENSGT00940000159817	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000162049	ENSGT01080000257336.a.c.a #23	ENSGT00940000163536	ENSGT00940000154868.b	ENSGT00940000158353 #32	ENSGT00940000155001.B #31	ENSGT00390000006450	ENSGT00940000163239 #30	ENSGT00940000161241 #29	ENSGT00940000153680.b #27	ENSGT00390000016048 #26	ENSGT00960000189590	ENSGT00440000038181 #25	ENSGT00950000182944.A #24
Chinese turtle	MODERN SPECIES	1382											STARD10 (ENSPSIG00000006965)	ENSPSIG00000001949	ARAP1 (ENSPSIG00000006969)	PDE2A (ENSPSIG00000010756)	ATG16L2 (ENSPSIG00000014104)	ENSPSIG00000014844 #22	WDR73 (ENSPSIG00000015889)	ENSPSIG00000001951	SLCO2B1 (ENSPSIG00000016068) #23	ENSPSIG00000001953	PGM2L1 (ENSPSIG00000006425) #32	CHRDL2 (ENSPSIG00000007442) #29	ENSPSIG00000001954	ENSPSIG00000007762 #30	KCNE3 (ENSPSIG00000007921) #31	RNF169 (ENSPSIG00000007937) #27	XRRA1 (ENSPSIG00000008020) #26	SPCS2 (ENSPSIG00000008941) #25	NEU3 (ENSPSIG00000009163) #24	P4HA3 (ENSPSIG00000009301) #34	PPME1 (ENSPSIG00000010276) #35
Testudinoidea	ANCESTRAL SPECIES	1										ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000162049.b	ENSGT00940000162049.a	ENSGT01080000257336.a.c.a #23	ENSGT00940000163536	ENSGT00940000154868.b	ENSGT00940000158353.a #32	ENSGT00940000155001.B.c #31	ENSGT00390000006450	ENSGT00940000163239 #30	ENSGT00940000161241 #29	ENSGT00940000153680.b #27	ENSGT00390000016048 #26	ENSGT00960000189590	ENSGT00440000038181 #25
Emydidae	ANCESTRAL SPECIES	148										ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701
Three-toed box turtle	MODERN SPECIES	198									INPPL1 (ENSTMTG00000019532)	ENSTMTG00000019395	CLPB (ENSTMTG00000019388)	STARD10 (ENSTMTG00000019366)	ARAP1 (ENSTMTG00000017312)	PDE2A (ENSTMTG00000014871)	ATG16L2 (ENSTMTG00000014640)	ARRB1 (ENSTMTG00000014605) #22	WDR73 (ENSTMTG00000014594)
painted turtle	MODERN SPECIES	815	LRRC51 (ENSCPBG00000004082)	ENSCPBG00000004090	ENSCPBG00000004095	TOMT (ENSCPBG00000004102)	ANAPC15 (ENSCPBG00000004116)	ENSCPBG00000004133	ENSCPBG00000004163	ENSCPBG00000004257	INPPL1 (ENSCPBG00000004673)	PHOX2A (ENSCPBG00000004888)	CLPB (ENSCPBG00000004900)	STARD10 (ENSCPBG00000004929)	ARAP1 (ENSCPBG00000004942)	PDE2A (ENSCPBG00000004977)	ATG16L2 (ENSCPBG00000004996)	ENSCPBG00000005018 #22	WDR73 (ENSCPBG00000005051)
Testudinidae	ANCESTRAL SPECIES		ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.g	ENSGT00950000183144.A.h	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000162049.b	ENSGT00940000162049.a	ENSGT01080000257336.a.c.a #23	ENSGT00940000154868.b	ENSGT00940000158353.a #32	ENSGT00940000155001.B.c #31	ENSGT00390000006450	ENSGT00940000163239 #30	ENSGT00940000161241 #29	ENSGT00940000153680.b #27	ENSGT00390000016048 #26	ENSGT00960000189590	ENSGT00440000038181 #25	ENSGT00950000182944.A.j #24
Abingdon island giant tortoise	MODERN SPECIES	282																ENSCABG00000007151 #22	WDR73 (ENSCABG00000007149)	ENSCABG00000007148
Goode s thornscrub tortoise	MODERN SPECIES		ENSGEVG00005001675	TOMT (ENSGEVG00005001760)	ANAPC15 (ENSGEVG00005001783)	ENSGEVG00005001793	ENSGEVG00005001804	ENSGEVG00005001814	INPPL1 (ENSGEVG00005001985)	PHOX2A (ENSGEVG00005002492)	CLPB (ENSGEVG00005002515)	STARD10 (ENSGEVG00005002578)	ARAP1 (ENSGEVG00005002609)	ENSGEVG00005002686	ENSGEVG00005002695	PDE2A (ENSGEVG00005002718)	ATG16L2 (ENSGEVG00005002742)	ARRB1 (ENSGEVG00005002777) #22	WDR73 (ENSGEVG00005002815)	ENSGEVG00005002824	ENSGEVG00005002835	SLCO2B1 (ENSGEVG00005002871) #23	ENSGEVG00005003019	PGM2L1 (ENSGEVG00005003082) #32	KCNE3 (ENSGEVG00005003093) #31	LIPT2 (ENSGEVG00005003105)	ENSGEVG00005003114 #30	CHRDL2 (ENSGEVG00005003144) #29	RNF169 (ENSGEVG00005003164) #27	XRRA1 (ENSGEVG00005003181) #26	SPCS2 (ENSGEVG00005003194) #25	ENSGEVG00005003212 #24	ENSGEVG00005003243 #24
Archosauria	ANCESTRAL SPECIES	2	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00960000190186	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000162049	ENSGT01080000257336.a.c.a #23	ENSGT00940000154868.b	ENSGT00940000158353 #32	ENSGT00940000155001.B #31	ENSGT00390000006450	ENSGT00940000163239 #30	ENSGT00940000161241 #29	ENSGT00940000153680.b #27	ENSGT00390000016048 #26	ENSGT00960000189590	ENSGT00440000038181 #25	ENSGT00950000182944.A #24	ENSGT00940000158967 #34
Aves	ANCESTRAL SPECIES	33	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00960000190186	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000162049	ENSGT01080000257336.a.c.a #23	ENSGT00940000154868.b	ENSGT00940000158353 #32	ENSGT00940000155001.B #31	ENSGT00390000006450	ENSGT00940000163239 #30	ENSGT00940000161241 #29	ENSGT00940000153680.b #27	ENSGT00390000016048 #26	ENSGT00960000189590	ENSGT00440000038181 #25	ENSGT00950000182944.A #24	ENSGT00940000158967 #34
Neognathae	ANCESTRAL SPECIES	1	ENSGT00390000013075.a	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.d	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00960000190186	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000162049	ENSGT01080000257336.a.c.a #23	ENSGT00940000154868.b	ENSGT00940000158353 #32	ENSGT00940000155001.B #31	ENSGT00390000006450	ENSGT00940000163239 #30	ENSGT00940000161241 #29	ENSGT00940000153680.b #27	ENSGT00390000016048 #26	ENSGT00960000189590	ENSGT00440000038181 #25	ENSGT00950000182944.A #24	ENSGT00940000158967 #34
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00950000182936.a.a.a	ENSGT00390000002732.n	ENSGT01100000263554.A.b	ENSGT00950000183144.A.c	ENSGT01090000260043.a.a.a.b.b.a.a.a	ENSGT01100000263490.A.a.a.a	ENSGT01090000260013.b.a.a.a.b	ENSGT01090000260013.b.b	ENSGT00910000144246	ENSGT00940000165269	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00960000190186	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000161067.y.b	ENSGT00940000162049	ENSGT01080000257336.a.c.a #23	ENSGT00940000154868.b	ENSGT00940000158353 #32	ENSGT00940000155001.B #31	ENSGT00390000006450	ENSGT00940000163239 #30	ENSGT00940000161241 #29	ENSGT00940000153680.b #27	ENSGT00390000016048 #26	ENSGT00960000189590	ENSGT00440000038181 #25	ENSGT00950000182944.A #24
Anatidae	ANCESTRAL SPECIES																	ENSGT00950000182887.C.a.b #22
Duck	DUPLICATION
Duck	MODERN SPECIES	3547																ARRB1 (ENSAPLG00000029239) #22
Duck	MODERN SPECIES	912																ENSAPLG00000021493 #22
Phasianidae	ANCESTRAL SPECIES		ENSGT00390000009554.l #12	ENSGT00390000009554.k #12	ENSGT00530000063516.a.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234601.c.a.a.g.b	ENSGT00960000189458	ENSGT00390000013075.a	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00960000190186	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000161067.y.b	ENSGT01080000257336.a.c.a #23	ENSGT00940000154868.b	ENSGT00940000158353 #32	ENSGT00940000155001.B #31	ENSGT00390000006450	ENSGT00940000163239 #30	ENSGT00940000161241 #29	ENSGT00940000153680.b #27	ENSGT00390000016048 #26	ENSGT00440000038181 #25	ENSGT00950000182944.A #24	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00530000063516.a.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234601.c.a.a.g.b	ENSGT01030000234601.c.a.a.g.a.b	ENSGT01030000234601.c.a.a.g.a.a	ENSGT00960000189458	ENSGT00390000013075.a	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00960000190186	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000161067.y.b	ENSGT01080000257336.a.c.a #23	ENSGT00940000154868.b	ENSGT00940000158353 #32	ENSGT00940000155001.B #31	ENSGT00390000006450	ENSGT00940000163239 #30	ENSGT00940000161241 #29	ENSGT00940000153680.b #27	ENSGT00390000016048 #26	ENSGT00440000038181 #25	ENSGT00950000182944.A #24	ENSGT00940000158967 #34	ENSGT00390000004396 #35
Chicken	MODERN SPECIES		ART1L2 (ENSGALG00010002382)	ENSGALG00010002398	RNF175 (ENSGALG00010002410)	ENSGALG00010002411	NUMA1 (ENSGALG00010002430)	LRRC51 (ENSGALG00010002440)	LAMTOR1 (ENSGALG00010002460)	TOMT (ENSGALG00010002461)	ENSGALG00010002465	STARD10 (ENSGALG00010001717)	ENSGALG00010001731	ENSGALG00010001740	ENSGALG00010001744	ENSGALG00010001746	ENSGALG00010001748	ARRB1 (ENSGALG00010001752) #22	ENSGALG00010001771	ENSGALG00010001774	SLCO2B1 (ENSGALG00010001796) #23	ENSGALG00010003512	PGM2L1 (ENSGALG00010001820) #32	KCNE3 (ENSGALG00010001822) #31	LIPT2 (ENSGALG00010001825)	POLD3 (ENSGALG00010001829) #30	CHRDL2 (ENSGALG00010001854) #29	RNF169 (ENSGALG00010001860) #27	XRRA1 (ENSGALG00010001862) #26	NEU3 (ENSGALG00010001886) #24	P4HA3 (ENSGALG00010001895) #34	PPME1 (ENSGALG00010002478) #35	C2CD3 (ENSGALG00010002507) #36
Turkey	DUPLICATION
Turkey	MODERN SPECIES	12	ENSMGAG00000003110	USP43 (ENSMGAG00000003106)	CFAP52 (ENSMGAG00000003069)	ENSMGAG00000003059	STX8 (ENSMGAG00000003035)	NTN1 (ENSMGAG00000022489)	PIK3R5 (ENSMGAG00000003012)	PIK3R6 (ENSMGAG00000002970)	ENSMGAG00000009916	ENSMGAG00000002956	ENSMGAG00000002436	ENSMGAG00000015404	ENSMGAG00000002469	ENSMGAG00000002442	ENSMGAG00000020057	ENSMGAG00000018070 #22	ENSMGAG00000002433	ENSMGAG00000002210	ENSMGAG00000002134	ENSMGAG00000002098	ENSMGAG00000002080	ENSMGAG00000018426	ENSMGAG00000002040	ENSMGAG00000002519	ENSMGAG00000021187	ENSMGAG00000021053	ENSMGAG00000001873	ENSMGAG00000021816	ENSMGAG00000022114	ENSMGAG00000010213	ENSMGAG00000022431
Turkey	MODERN SPECIES	1249															ENSMGAG00000021343	ENSMGAG00000022912 #22
Neognathae_b	ANCESTRAL SPECIES		ENSGT01100000263536.B.c.b	ENSGT00940000163592	ENSGT01100000263484.C.a.k	ENSGT00940000155097	ENSGT00940000158195	ENSGT00940000153222.a.b.b.b.b	ENSGT00940000163684	ENSGT00950000182887.C.b.b ##22	ENSGT00940000166245	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000162049	ENSGT01080000257336.a.c.a #23	ENSGT00940000154868.b	ENSGT00940000158353 #32	ENSGT00940000155001.B #31	ENSGT00390000006450	ENSGT00940000163239 #30	ENSGT00940000161241 #29	ENSGT00940000153680.b #27	ENSGT00390000016048 #26	ENSGT00960000189590	ENSGT00440000038181 #25	ENSGT00950000182944.A #24	ENSGT00940000158967 #34
Passeriformes	ANCESTRAL SPECIES	24	ENSGT01040000240444.A.a.a.a.b	ENSGT01050000245003	ENSGT01100000263536.B.c.b	ENSGT00940000163592	ENSGT00940000155097	ENSGT00940000158195	ENSGT00940000153222.a.b.b.b.b	ENSGT00940000163684	ENSGT00950000182887.C.b.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000163623.e	ENSGT00390000009554 #12	ENSGT00530000063516.a.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00950000182818.D.a	ENSGT00500000044986	ENSGT00530000063252.a.b	ENSGT00940000155799	ENSGT00390000008902	ENSGT00940000160634
Great tit	MODERN SPECIES		HSPA13 (ENSPMJG00000012134)	SAMSN1 (ENSPMJG00000012133)	NRIP1 (ENSPMJG00000012131)	USP25 (ENSPMJG00000012125)	CXADR (ENSPMJG00000012108)	LAMTOR1 (ENSPMJG00000012106)	ENSPMJG00000012105	ENSPMJG00000012104	ENSPMJG00000012103	INPPL1 (ENSPMJG00000012102)	PHOX2A (ENSPMJG00000012101)	CLPB (ENSPMJG00000012100)	STARD10 (ENSPMJG00000012099)	ARAP1 (ENSPMJG00000012098)	PDE2A (ENSPMJG00000012097)	ARRB1 (ENSPMJG00000012096) #22	WDR73 (ENSPMJG00000012095)	ENSPMJG00000012093	EMSY (ENSPMJG00000012091) #12	THAP12 (ENSPMJG00000012090)	WNT11 (ENSPMJG00000012085) #14	UVRAG (ENSPMJG00000012083) #15	DGAT2 (ENSPMJG00000012082) #16	MOGAT2 (ENSPMJG00000012081) #17	ENSPMJG00000012080	MAP6 (ENSPMJG00000012079) #18	ENSPMJG00000012073	APP (ENSPMJG00000012072)	GABPA (ENSPMJG00000012071)	ENSPMJG00000012070	JAM2 (ENSPMJG00000012069)
Passeriformes_d	ANCESTRAL SPECIES	27	ENSGT01040000240444.A.a.a.a.b	ENSGT01050000245003	ENSGT01100000263536.B.c.b	ENSGT00940000163592	ENSGT00940000155097	ENSGT00940000158195	ENSGT00940000153222.a.b.b.b.b	ENSGT00940000163684	ENSGT00950000182887.C.b.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000163623.e	ENSGT00390000009554 #12	ENSGT00530000063516.a.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00950000182818.D.a	ENSGT00500000044986	ENSGT00530000063252.a.b	ENSGT00940000155799	ENSGT00390000008902	ENSGT00940000160634
Flycatcher	MODERN SPECIES		ENSFALG00000006310	ENSFALG00000027906	ENSFALG00000006307	ENSFALG00000006305	NUMA1 (ENSFALG00000006299)	LAMTOR1 (ENSFALG00000025763)	TOMT (ENSFALG00000006289)	ANAPC15 (ENSFALG00000006281)	ENSFALG00000006276	INPPL1 (ENSFALG00000006266)	PHOX2A (ENSFALG00000006255)	CLPB (ENSFALG00000006254)	STARD10 (ENSFALG00000023469)	ENSFALG00000006247	PDE2A (ENSFALG00000006241)	ENSFALG00000006237 #22	ENSFALG00000006235	ENSFALG00000006232	EMSY (ENSFALG00000006228) #12	THAP12 (ENSFALG00000006223)	ENSFALG00000027681	WNT11 (ENSFALG00000006210) #14	ENSFALG00000027208	UVRAG (ENSFALG00000011910) #15	DGAT2 (ENSFALG00000011919) #16	MOGAT2 (ENSFALG00000011925) #17	ENSFALG00000011929 #18	ENSFALG00000028521	CYYR1 (ENSFALG00000026920)	APP (ENSFALG00000011958)	GABPA (ENSFALG00000011983)
Passeriformes_g	ANCESTRAL SPECIES	28	ENSGT01040000240444.A.a.a.a.b	ENSGT01050000245003	ENSGT01100000263536.B.c.b	ENSGT00940000163592	ENSGT00940000155097	ENSGT00940000158195	ENSGT00940000153222.a.b.b.b.b	ENSGT00940000163684	ENSGT00950000182887.C.b.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000163623.e	ENSGT00390000009554 #12	ENSGT00530000063516.a.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00950000182818.D.a	ENSGT00500000044986	ENSGT00530000063252.a.b	ENSGT00940000155799	ENSGT00390000008902	ENSGT00940000160634
Passeroidea	ANCESTRAL SPECIES	30	ENSGT01040000240444.A.a.a.a.b	ENSGT01050000245003	ENSGT01100000263536.B.c.b	ENSGT00940000163592	ENSGT00940000155097	ENSGT00940000158195	ENSGT00940000153222.a.b.b.b.b	ENSGT00940000163684	ENSGT00950000182887.C.b.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000163623.e	ENSGT00390000009554 #12	ENSGT00530000063516.a.a	ENSGT00940000158413 #14	ENSGT00390000012877 #15	ENSGT01030000234582.f.a.b #16	ENSGT01030000234582.e.b #17	ENSGT00530000063947.C #18	ENSGT00950000182818.D.a	ENSGT00500000044986	ENSGT00530000063252.a.b	ENSGT00940000155799	ENSGT00390000008902	ENSGT00940000160634
Zebra finch	MODERN SPECIES		ENSTGUG00000013586	BACH1 (ENSTGUG00000013585)	PAXBP1 (ENSTGUG00000013579)	RNF121 (ENSTGUG00000013584)	ENSTGUG00000019101	NUMA1 (ENSTGUG00000025341)	LAMTOR1 (ENSTGUG00000013581)	TOMT (ENSTGUG00000019290)	ANAPC15 (ENSTGUG00000018949)	ENSTGUG00000013578	INPPL1 (ENSTGUG00000021546)	PHOX2A (ENSTGUG00000027907)	CLPB (ENSTGUG00000013575)	ARAP1 (ENSTGUG00000013572)	PDE2A (ENSTGUG00000013571)	ARRB1 (ENSTGUG00000013570) #22	WDR73 (ENSTGUG00000013569)	ENSTGUG00000013568	EMSY (ENSTGUG00000013566) #12	THAP12 (ENSTGUG00000013565)	WNT11 (ENSTGUG00000013564) #14	UVRAG (ENSTGUG00000013563) #15	DGAT2 (ENSTGUG00000013562) #16	MOGAT2 (ENSTGUG00000013561) #17	ENSTGUG00000024357	MAP6 (ENSTGUG00000029483) #18	ENSTGUG00000013560	APP (ENSTGUG00000013557)	GABPA (ENSTGUG00000013556)	ATP5PF (ENSTGUG00000028297)	JAM2 (ENSTGUG00000021020)
Common canary	MODERN SPECIES	33	PAXBP1 (ENSSCAG00000016662)	RNF121 (ENSSCAG00000016654)	ENSSCAG00000016652	NUMA1 (ENSSCAG00000016646)	ENSSCAG00000016642	TOMT (ENSSCAG00000016640)	ANAPC15 (ENSSCAG00000016638)	ENSSCAG00000016635	INPPL1 (ENSSCAG00000016621)	ENSSCAG00000016608	PHOX2A (ENSSCAG00000016594)	CLPB (ENSSCAG00000016581)	STARD10 (ENSSCAG00000016576)	ARAP1 (ENSSCAG00000016530)	PDE2A (ENSSCAG00000016517)	ARRB1 (ENSSCAG00000016514) #22	WDR73 (ENSSCAG00000016509)	NCAM2 (ENSSCAG00000016497)
Medium ground finch	MODERN SPECIES	269	ENSGFOG00000013959	BACH1 (ENSGFOG00000013958)	PAXBP1 (ENSGFOG00000013953)	C21orf62 (ENSGFOG00000013950)	ENSGFOG00000013949	RNF121 (ENSGFOG00000013947)	NUMA1 (ENSGFOG00000013944)	LAMTOR1 (ENSGFOG00000013942)	TOMT (ENSGFOG00000013941)	ANAPC15 (ENSGFOG00000013940)	ENSGFOG00000013939	CLPB (ENSGFOG00000013914)	STARD10 (ENSGFOG00000013913)	ARAP1 (ENSGFOG00000013613)	PDE2A (ENSGFOG00000013566)	ARRB1 (ENSGFOG00000013557) #22	WDR73 (ENSGFOG00000013554)	ENSGFOG00000013553	EMSY (ENSGFOG00000013548) #12
Neognathae_c	ANCESTRAL SPECIES	11	ENSGT00550000074799	ENSGT01030000234601.c.a.a	ENSGT00960000189458	ENSGT00390000013075.a	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.d	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000162049	ENSGT01080000257336.a.c.a #23	ENSGT00940000154868.b	ENSGT00940000158353 #32	ENSGT00940000155001.B #31	ENSGT00390000006450	ENSGT00940000163239 #30	ENSGT00940000161241 #29	ENSGT00940000153680.b #27	ENSGT00390000016048 #26	ENSGT00960000189590	ENSGT00440000038181 #25	ENSGT00950000182944.A #24	ENSGT00940000158967 #34
Golden eagle	MODERN SPECIES	10	ENSACCG00020010289	ART1 (ENSACCG00020010280)	ENSACCG00020010268	RNF121 (ENSACCG00020010256)	XNDC1N (ENSACCG00020010242)	NUMA1 (ENSACCG00020010219)	LAMTOR1 (ENSACCG00020010208)	TOMT (ENSACCG00020010198)	ANAPC15 (ENSACCG00020010189)	ENSACCG00020010179	PHOX2A (ENSACCG00020010151)	CLPB (ENSACCG00020010131)	STARD10 (ENSACCG00020010098)	ARAP1 (ENSACCG00020010037)	PDE2A (ENSACCG00020009991)	ARRB1 (ENSACCG00020009965) #22	WDR73 (ENSACCG00020009949)	ENSACCG00020009942	SLCO2B1 (ENSACCG00020009937) #23	ENSACCG00020009918	PGM2L1 (ENSACCG00020009896) #32	KCNE3 (ENSACCG00020009883) #31	LIPT2 (ENSACCG00020009876)	ENSACCG00020009858 #30	CHRDL2 (ENSACCG00020009830) #29	RNF169 (ENSACCG00020009811) #27	ENSACCG00020009800 #26	ENSACCG00020009788	SPCS2 (ENSACCG00020009775) #25	NEU3 (ENSACCG00020009754) #24	P4HA3 (ENSACCG00020009743) #34
Kakapo	MODERN SPECIES	11	ENSSHBG00005017863	RNF121 (ENSSHBG00005017857)	XNDC1N (ENSSHBG00005017851)	NUMA1 (ENSSHBG00005017815)	LAMTOR1 (ENSSHBG00005017801)	TOMT (ENSSHBG00005017795)	ANAPC15 (ENSSHBG00005017790)	ENSSHBG00005017788	ENSSHBG00005017762	PHOX2A (ENSSHBG00005017760)	CLPB (ENSSHBG00005017755)	STARD10 (ENSSHBG00005017749)	ARAP1 (ENSSHBG00005008177)	PDE2A (ENSSHBG00005007700)	ENSSHBG00005007683	ARRB1 (ENSSHBG00005007666) #22	ENSSHBG00005007652	ENSSHBG00005007648	SLCO2B1 (ENSSHBG00005007635) #23	ENSSHBG00005007625	PGM2L1 (ENSSHBG00005007613) #32	KCNE3 (ENSSHBG00005007603) #31	LIPT2 (ENSSHBG00005007598)	ENSSHBG00005007583 #30	CHRDL2 (ENSSHBG00005007569) #29	RNF169 (ENSSHBG00005007557) #27	ENSSHBG00005007539 #26	SPCS2 (ENSSHBG00005000666) #25	NEU3 (ENSSHBG00005019831) #24	P4HA3 (ENSSHBG00005019829) #34	PPME1 (ENSSHBG00005019821) #35
Lepidosauria	ANCESTRAL SPECIES	57	ENSGT00940000167530	ENSGT00960000190355	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00940000174692	ENSGT00940000159817	ENSGT00940000175321	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701
tuatara	MODERN SPECIES	145													PDE2A (ENSSPUG00000018928)	ENSSPUG00000018923	ATG16L2 (ENSSPUG00000018909)	ARRB1 (ENSSPUG00000018675) #22	ENSSPUG00000018614	ENSSPUG00000018610
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000158967 #34	ENSGT00950000182944.A.k.a.b #24	ENSGT00950000182944.A.k.a.a #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000154868.b	ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000159817	ENSGT00940000174692	ENSGT00390000012961	ENSGT00940000161147	ENSGT00940000156576	ENSGT00950000183144.A	ENSGT00390000000938	ENSGT00940000161220	ENSGT00940000156432.b	ENSGT00390000016789	ENSGT00960000190355	ENSGT00940000167530	ENSGT00510000047925	ENSGT00950000183078.b.a.a
Toxicofera	ANCESTRAL SPECIES	115													ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b #22
Elapidae	ANCESTRAL SPECIES	52													ENSGT01080000257336.a.c.a #23	ENSGT00940000162049	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b #22	ENSGT00950000182944.A.k.a.b #24	ENSGT00950000182944.A.l.a #24	ENSGT00940000158967.f #34	ENSGT00940000158967.e #34	ENSGT00390000004396 #35	ENSGT00510000048072 #36	ENSGT00940000161030 #37	ENSGT00940000159524.k.b	ENSGT00940000158090	ENSGT00390000005948	ENSGT00390000008503	ENSGT00390000012955.k.a	ENSGT00940000154769	ENSGT00390000013989.b	ENSGT00390000005140.b.a
Indian cobra	MODERN SPECIES	4	ENSNNAG00000011276	INPPL1 (ENSNNAG00000010722)	PHOX2A (ENSNNAG00000010655)	CLPB (ENSNNAG00000009815)	STARD10 (ENSNNAG00000009731)	ENSNNAG00000009679	ENSNNAG00000009619	SPCS2 (ENSNNAG00000009593) #25	RNF169 (ENSNNAG00000009533) #27	ENSNNAG00000009517 #30	LIPT2 (ENSNNAG00000009503)	KCNE3 (ENSNNAG00000009495) #31	ENSNNAG00000009314 #23	ENSNNAG00000009293	ENSNNAG00000009282	ARRB1 (ENSNNAG00000009211) #22	ENSNNAG00000009172 #24	ENSNNAG00000009147 #24	ENSNNAG00000009133 #34	ENSNNAG00000009108 #34	PPME1 (ENSNNAG00000009058) #35	UCP3 (ENSNNAG00000008795) #37	UCP2 (ENSNNAG00000008758)	DNAJB13 (ENSNNAG00000008717)	PAAF1 (ENSNNAG00000008661)	COA4 (ENSNNAG00000008652)	MRPL48 (ENSNNAG00000008628)	RAB6A (ENSNNAG00000008615)	PLEKHB1 (ENSNNAG00000008532)	FAM168A (ENSNNAG00000008512)	RELT (ENSNNAG00000008426)
Elapidae_a	ANCESTRAL SPECIES	138														ENSGT01080000257336.a.c.a #23	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b #22	ENSGT00950000182944.A.k.a.b #24	ENSGT00940000158967.f #34	ENSGT00940000158967.e #34	ENSGT00390000004396 #35	ENSGT00510000048072 #36	ENSGT00940000159524.k.b	ENSGT00940000158090	ENSGT00390000005948	ENSGT00390000008503	ENSGT00390000012955.k.a	ENSGT00940000154769	ENSGT00390000013989.b
Blue-lipped sea krait	MODERN SPECIES	4531																ARRB1 (ENSLLTG00000015436) #22
Acanthophiinae	ANCESTRAL SPECIES	126														ENSGT01080000257336.a.c.a #23	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b #22	ENSGT00950000182944.A.k.a.b #24	ENSGT00940000158967.f #34	ENSGT00940000158967.e #34	ENSGT00390000004396 #35	ENSGT00510000048072 #36	ENSGT00940000159524.k.b	ENSGT00940000158090	ENSGT00390000005948	ENSGT00390000008503	ENSGT00390000012955.k.a	ENSGT00940000154769	ENSGT00390000013989.b
Eastern brown snake	MODERN SPECIES	237														ENSPTXG00000018732 #23	ATG16L2 (ENSPTXG00000018734)	ENSPTXG00000018736 #22	NEU3 (ENSPTXG00000018768) #24	ENSPTXG00000018769 #34	PPME1 (ENSPTXG00000018770) #35	ENSPTXG00000018771 #36
Laterata	ANCESTRAL SPECIES	3	ENSGT00510000048072 #36	ENSGT00390000004396 #35	ENSGT00940000158967 #34	ENSGT00950000182944.A.k.a.a #24	ENSGT00440000038181 #25	ENSGT00390000016048 #26	ENSGT00940000153680.b #27	ENSGT00940000161241 #29	ENSGT00940000163239 #30	ENSGT00390000006450	ENSGT00940000155001.B #31	ENSGT00940000158353 #32	ENSGT00940000154868.b	ENSGT01080000257336.a.c.a #23	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b #22	ENSGT00390000015701	ENSGT00940000159817	ENSGT00390000012961	ENSGT00940000161147	ENSGT00940000156576	ENSGT00950000183144.A	ENSGT00390000000938	ENSGT00940000161220	ENSGT00940000156432.b	ENSGT00390000016789	ENSGT00510000047925	ENSGT00950000183078.b.a.a	ENSGT00390000013075.a	ENSGT00390000004140.b	ENSGT01060000248588.b
Common wall lizard	MODERN SPECIES	12	ENSPMRG00000001750 #26	RNF169 (ENSPMRG00000001729) #27	CHRDL2 (ENSPMRG00000001688) #29	ENSPMRG00000001671 #30	ENSPMRG00000001655 #30	LIPT2 (ENSPMRG00000001645)	PGM2L1 (ENSPMRG00000001634) #32	ENSPMRG00000001631	ENSPMRG00000001626	ENSPMRG00000001620	ENSPMRG00000001614	ENSPMRG00000001606	ENSPMRG00000001585 #23	ATG16L2 (ENSPMRG00000001532)	ENSPMRG00000001526	ARRB1 (ENSPMRG00000001506) #22	ENSPMRG00000001498	ENSPMRG00000001487	PDE2A (ENSPMRG00000001460)	ENSPMRG00000001450	ENSPMRG00000001441	ARAP1 (ENSPMRG00000001406)	ENSPMRG00000001391	ENSPMRG00000001383	STARD10 (ENSPMRG00000001371)	CLPB (ENSPMRG00000001260)	PHOX2A (ENSPMRG00000001227)	INPPL1 (ENSPMRG00000001205)	ENSPMRG00000001190	ANAPC15 (ENSPMRG00000001180)	TOMT (ENSPMRG00000001056)
Argentine black and white tegu	MODERN SPECIES	24	ENSSMRG00000006541	ENSSMRG00000006537 #24	ENSSMRG00000006532 #24	SPCS2 (ENSSMRG00000006523) #25	ENSSMRG00000006511 #26	RNF169 (ENSSMRG00000006509) #27	CHRDL2 (ENSSMRG00000006488) #29	ENSSMRG00000006481 #30	LIPT2 (ENSSMRG00000006478)	KCNE3 (ENSSMRG00000006477) #31	ENSSMRG00000006475	PGM2L1 (ENSSMRG00000006461) #32	ENSSMRG00000006451	ENSSMRG00000006291 #23	ATG16L2 (ENSSMRG00000006260)	ENSSMRG00000006224 #22	WDR73 (ENSSMRG00000006202)	PDE2A (ENSSMRG00000000432)
Anura	ANCESTRAL SPECIES	585																ENSGT00950000182887.C.a.b #22	ENSGT00940000161369.B.d.b
Leishan spiny toad	MODERN SPECIES	5	PSPC1 (ENSLLEG00000003856)	ENSLLEG00000003878	ENSLLEG00000003911	ENSLLEG00000004059	CENPJ (ENSLLEG00000004194)	ENSLLEG00000004197	ENSLLEG00000004213	ENSLLEG00000004218	ENSLLEG00000004221	ENSLLEG00000004225	ARHGAP20 (ENSLLEG00000004233)	ENSLLEG00000004250	FDX1 (ENSLLEG00000004257)	ENSLLEG00000004261	ENSLLEG00000012140	ARRB1 (ENSLLEG00000012277) #22	ENSLLEG00000014020	ENSLLEG00000014047	ENSLLEG00000014070	ENSLLEG00000014087	ENSLLEG00000014114	ENSLLEG00000014144	ENSLLEG00000014166	ENSLLEG00000014228	ENSLLEG00000014273	ENSLLEG00000014365	DYNC2H1 (ENSLLEG00000014586)	ENSLLEG00000017270	ENSLLEG00000017288	ENSLLEG00000017320	PDGFD (ENSLLEG00000017360)
Frog	MODERN SPECIES	2	znf16 (ENSXETG00000042445)	pold3 (ENSXETG00000026450) #30	chrdl2 (ENSXETG00000045317) #29	rnf169 (ENSXETG00000042116) #27	xrra1 (ENSXETG00000048051) #26	spcs2 (ENSXETG00000040068) #25	ENSXETG00000040711	ENSXETG00000040991	ENSXETG00000045583	ENSXETG00000041808	ENSXETG00000039960	ENSXETG00000041315	ENSXETG00000045206	atg16l2 (ENSXETG00000039418)	ENSXETG00000035409	arrb1 (ENSXETG00000009605) #22	ENSXETG00000038828	ENSXETG00000045034	ENSXETG00000027192	cdk4 (ENSXETG00000035239)	ENSXETG00000047215	ENSXETG00000001428	ENSXETG00000043580	XB5900534 [provisional:or56a5] (ENSXETG00000045559)	ENSXETG00000044557	ENSXETG00000046015	ENSXETG00000047901	ENSXETG00000041986	ENSXETG00000045087	ENSXETG00000048936	ENSXETG00000043805
Coelacanth	MODERN SPECIES	1559															ENSLACG00000010289	ARRB1 (ENSLACG00000002898) #22