Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00390000007843 #8	ENSGT01100000264599 #9	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00950000185410	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36
Primates	ANCESTRAL SPECIES	3	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT01100000264599 #9	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00950000185410	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT01100000264599 #9	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00390000007843.u.a #8	ENSGT01100000264599 #9	ENSGT00390000007843.v ##8	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00860000135909	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Catarrhini	ANCESTRAL SPECIES	8	ENSGT01100000264599 #9	ENSGT00390000007843.v ##8	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00860000135909	ENSGT00940000165611 #15	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603.b #37
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00390000007843.u.a #8	ENSGT01100000264599 #9	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00860000135909	ENSGT00940000165611 #15	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713.h.b ##30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603.b #37
Hominidae	ANCESTRAL SPECIES	16	ENSGT00390000007843.u.a #8	ENSGT01100000264599 #9	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00860000135909	ENSGT00940000165611 #15	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713.h.a #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603.b #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00390000007843.u.a #8	ENSGT01100000264599 #9	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00860000135909	ENSGT00940000165611 #15	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713.h.a.a.b #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603.b #37
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00390000007843.u.a #8	ENSGT01100000264599 #9	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00860000135909	ENSGT00940000165611 #15	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713.h.a.a.b #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603.b #37
Pan	ANCESTRAL SPECIES	3	ENSGT00390000007843.u.a #8	ENSGT01100000264599 #9	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00860000135909	ENSGT00940000165611 #15	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713.h.a.a.b #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603.b #37
Bonobo	MODERN SPECIES	8	ENSPPAG00000029732 #7	SNF8 (ENSPPAG00000030822) #8	ENSPPAG00000029824 #9	ENSPPAG00000001213 #10	ATP5MC1 (ENSPPAG00000039996) #11	CALCOCO2 (ENSPPAG00000037813) #12	TTLL6 (ENSPPAG00000036197) #13	HOXB13 (ENSPPAG00000027794) #14	PRAC1 (ENSPPAG00000014004) #15	HOXB9 (ENSPPAG00000028486) #16	HOXB8 (ENSPPAG00000034804) #17	HOXB7 (ENSPPAG00000010963) #18	HOXB6 (ENSPPAG00000032229) #19	HOXB5 (ENSPPAG00000039181) #20	HOXB4 (ENSPPAG00000040659) #21	HOXB3 (ENSPPAG00000032630) #22	HOXB2 (ENSPPAG00000027417) #23	HOXB1 (ENSPPAG00000039129) #24	SKAP1 (ENSPPAG00000039277) #25	SNX11 (ENSPPAG00000033185) #26	ENSPPAG00000030413 #27	NFE2L1 (ENSPPAG00000031737) #28	COPZ2 (ENSPPAG00000043351) #29	ENSPPAG00000029145 #30	PRR15L (ENSPPAG00000003316) #31	PNPO (ENSPPAG00000038148) #32	SP2 (ENSPPAG00000027065) #33	SP6 (ENSPPAG00000026169) #34	SCRN2 (ENSPPAG00000028214) #35	LRRC46 (ENSPPAG00000038983) #36	MRPL10 (ENSPPAG00000034452) #37
Chimpanzee	MODERN SPECIES	8	SNF8 (ENSPTRG00000051067) #8	UBE2Z (ENSPTRG00000009365) #10	ENSPTRG00000051053 #9	ATP5MC1 (ENSPTRG00000009364) #11	CALCOCO2 (ENSPTRG00000009363) #12	TTLL6 (ENSPTRG00000009361) #13	HOXB13 (ENSPTRG00000009360) #14	PRAC2 (ENSPTRG00000048455)	PRAC1 (ENSPTRG00000009359) #15	HOXB9 (ENSPTRG00000009358) #16	HOXB8 (ENSPTRG00000048497) #17	HOXB7 (ENSPTRG00000009357) #18	HOXB6 (ENSPTRG00000009356) #19	HOXB5 (ENSPTRG00000009355) #20	HOXB4 (ENSPTRG00000009354) #21	HOXB3 (ENSPTRG00000052423) #22	HOXB2 (ENSPTRG00000009352) #23	HOXB1 (ENSPTRG00000009351) #24	SKAP1 (ENSPTRG00000009350) #25	SNX11 (ENSPTRG00000009349) #26	CBX1 (ENSPTRG00000052115) #27	NFE2L1 (ENSPTRG00000022631) #28	COPZ2 (ENSPTRG00000009346) #29	CDK5RAP3 (ENSPTRG00000009345) #30	PRR15L (ENSPTRG00000047216) #31	PNPO (ENSPTRG00000009343) #32	SP2 (ENSPTRG00000009342) #33	SP6 (ENSPTRG00000009340) #34	SCRN2 (ENSPTRG00000009339) #35	LRRC46 (ENSPTRG00000009338) #36	MRPL10 (ENSPTRG00000009337) #37
Human	MODERN SPECIES	8	GIP (ENSG00000159224)	SNF8 (ENSG00000159210) #8	UBE2Z (ENSG00000159202) #10	ATP5MC1 (ENSG00000159199) #11	CALCOCO2 (ENSG00000136436) #12	TTLL6 (ENSG00000170703) #13	HOXB13 (ENSG00000159184) #14	PRAC2 (ENSG00000229637)	PRAC1 (ENSG00000159182) #15	HOXB9 (ENSG00000170689) #16	HOXB8 (ENSG00000120068) #17	HOXB7 (ENSG00000260027) #18	HOXB6 (ENSG00000108511) #19	HOXB5 (ENSG00000120075) #20	HOXB4 (ENSG00000182742) #21	HOXB3 (ENSG00000120093) #22	HOXB2 (ENSG00000173917) #23	HOXB1 (ENSG00000120094) #24	SKAP1 (ENSG00000141293) #25	SNX11 (ENSG00000002919) #26	CBX1 (ENSG00000108468) #27	NFE2L1 (ENSG00000082641) #28	COPZ2 (ENSG00000005243) #29	CDK5RAP3 (ENSG00000108465) ##30	PRR15L (ENSG00000167183) #31	PNPO (ENSG00000108439) #32	SP2 (ENSG00000167182) #33	SP6 (ENSG00000189120) #34	SCRN2 (ENSG00000141295) #35	LRRC46 (ENSG00000141294) #36	MRPL10 (ENSG00000159111) #37
Gorilla	MODERN SPECIES	18	SNF8 (ENSGGOG00000025290) #8	ENSGGOG00000041818 #10	ENSGGOG00000041027 #9	ATP5MC1 (ENSGGOG00000001626) #11	ENSGGOG00000040493	CALCOCO2 (ENSGGOG00000005537) #12	TTLL6 (ENSGGOG00000001947) #13	HOXB13 (ENSGGOG00000001945) #14	ENSGGOG00000042122	PRAC1 (ENSGGOG00000027105) #15	ENSGGOG00000036688 #16	HOXB8 (ENSGGOG00000039810) #17	HOXB7 (ENSGGOG00000002637) #18	HOXB6 (ENSGGOG00000002634) #19	HOXB5 (ENSGGOG00000023582) #20	HOXB3 (ENSGGOG00000012838) #22	HOXB2 (ENSGGOG00000009910) #23	HOXB1 (ENSGGOG00000009904) #24	SKAP1 (ENSGGOG00000012624) #25	ENSGGOG00000025896	CBX1 (ENSGGOG00000024063) #27	NFE2L1 (ENSGGOG00000002268) #28	COPZ2 (ENSGGOG00000002264) #29	ENSGGOG00000022994 ##30	PRR15L (ENSGGOG00000037816) #31	PNPO (ENSGGOG00000003786) #32	SP2 (ENSGGOG00000005330) #33	SP6 (ENSGGOG00000036261) #34	SCRN2 (ENSGGOG00000004547) #35	LRRC46 (ENSGGOG00000012667) #36	MRPL10 (ENSGGOG00000015353) #37
Orangutan	MODERN SPECIES	8	GIP (ENSPPYG00000008912)	ENSPPYG00000008911 #8	UBE2Z (ENSPPYG00000032681) #10	ATP5MC1 (ENSPPYG00000008909) #11	CALCOCO2 (ENSPPYG00000008907) #12	TTLL6 (ENSPPYG00000008906) #13	HOXB13 (ENSPPYG00000008904) #14	ENSPPYG00000036609	PRAC1 (ENSPPYG00000008903) #15	HOXB9 (ENSPPYG00000008902) #16	HOXB8 (ENSPPYG00000038542) #17	HOXB7 (ENSPPYG00000008901) #18	HOXB6 (ENSPPYG00000008899) #19	HOXB5 (ENSPPYG00000008898) #20	HOXB4 (ENSPPYG00000008897) #21	HOXB3 (ENSPPYG00000008896) #22	HOXB2 (ENSPPYG00000008895) #23	HOXB1 (ENSPPYG00000008894) #24	SKAP1 (ENSPPYG00000008893) #25	SNX11 (ENSPPYG00000008892) #26	ENSPPYG00000008891 ##27	NFE2L1 (ENSPPYG00000036998) #28	ENSPPYG00000008889 #29	CDK5RAP3 (ENSPPYG00000008888) ##30	PRR15L (ENSPPYG00000008887) #31	PNPO (ENSPPYG00000040967) #32	SP2 (ENSPPYG00000008885) #33	SP6 (ENSPPYG00000008884) #34	SCRN2 (ENSPPYG00000008883) #35	LRRC46 (ENSPPYG00000032761) #36	MRPL10 (ENSPPYG00000008881) #37
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00390000005121	ENSGT00390000007843.u.a #8	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00860000135909	ENSGT00940000165611 #15	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603.b #37
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00390000005121	ENSGT00390000007843.u.a #8	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00860000135909	ENSGT00940000165611 #15	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603.b #37
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00390000007843.u.a #8	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00860000135909	ENSGT00940000165611 #15	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603.b #37
Cercopithecinae_b	ANCESTRAL SPECIES	20	ENSGT00390000005121	ENSGT00390000007843.u.a #8	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000165611 #15	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603.b #37
Cercopithecinae_d	ANCESTRAL SPECIES	7	ENSGT00390000005121	ENSGT00390000007843.u.a #8	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000165611 #15	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603.b #37
Sooty mangabey	MODERN SPECIES	564	ENSCATG00000044943	GIP (ENSCATG00000031593)	SNF8 (ENSCATG00000038375) #8	UBE2Z (ENSCATG00000038755) #10	ATP5MC1 (ENSCATG00000030174) #11	CALCOCO2 (ENSCATG00000007708) #12	ENSCATG00000016293	TTLL6 (ENSCATG00000029768) #13	HOXB13 (ENSCATG00000041758) #14	PRAC1 (ENSCATG00000038550) #15	HOXB9 (ENSCATG00000002169) #16	HOXB8 (ENSCATG00000025318) #17	HOXB7 (ENSCATG00000042829) #18	HOXB6 (ENSCATG00000043342) #19	HOXB5 (ENSCATG00000027616) #20	HOXB3 (ENSCATG00000031126) #22	HOXB4 (ENSCATG00000040704) #21	HOXB2 (ENSCATG00000035238) #23	HOXB1 (ENSCATG00000035575) #24	SKAP1 (ENSCATG00000044458) #25	ENSCATG00000019817	SNX11 (ENSCATG00000030351) #26	ENSCATG00000034735 ##27	NFE2L1 (ENSCATG00000040775) #28	COPZ2 (ENSCATG00000042708) #29	CDK5RAP3 (ENSCATG00000006699) #30	PRR15L (ENSCATG00000020186) #31	PNPO (ENSCATG00000039934) #32	ENSCATG00000003341 #33	SP6 (ENSCATG00000020123) #34	SCRN2 (ENSCATG00000038846) #35
Drill	MODERN SPECIES	1297	IGF2BP1 (ENSMLEG00000026086)	ENSMLEG00000043660	GIP (ENSMLEG00000032963)	SNF8 (ENSMLEG00000037501) #8	UBE2Z (ENSMLEG00000043345) #10	ATP5MC1 (ENSMLEG00000026746) #11	CALCOCO2 (ENSMLEG00000034129) #12	TTLL6 (ENSMLEG00000023683) #13	HOXB13 (ENSMLEG00000043860) #14	PRAC1 (ENSMLEG00000033309) #15	HOXB9 (ENSMLEG00000030602) #16	HOXB8 (ENSMLEG00000007179) #17	HOXB7 (ENSMLEG00000042331) #18	HOXB6 (ENSMLEG00000029580) #19	HOXB5 (ENSMLEG00000009970) #20	HOXB3 (ENSMLEG00000026268) #22	HOXB4 (ENSMLEG00000029897) #21	HOXB2 (ENSMLEG00000031955) #23	HOXB1 (ENSMLEG00000037557) #24	SKAP1 (ENSMLEG00000029308) #25	SNX11 (ENSMLEG00000039008) #26	CBX1 (ENSMLEG00000038745) #27	NFE2L1 (ENSMLEG00000039330) #28	COPZ2 (ENSMLEG00000039090) #29	CDK5RAP3 (ENSMLEG00000033869) #30	PRR15L (ENSMLEG00000020212) #31	PNPO (ENSMLEG00000040872) #32	SP2 (ENSMLEG00000032228) #33	SP6 (ENSMLEG00000027177) #34	SCRN2 (ENSMLEG00000041491) #35	LRRC46 (ENSMLEG00000031583) #36
Macaca	ANCESTRAL SPECIES	4	ENSGT00390000007843.u.a #8	ENSGT00940000159091 #10	ENSGT00940000154298.a.b.e #11	ENSGT00950000183025.a #12	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00860000135909	ENSGT00940000165611 #15	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603.b #37
Pig-tailed macaque	MODERN SPECIES	494	SNF8 (ENSMNEG00000032473) #8	UBE2Z (ENSMNEG00000040572) #10	ENSMNEG00000011359 #11	ENSMNEG00000027016	CALCOCO2 (ENSMNEG00000041410) #12	TTLL6 (ENSMNEG00000035034) #13	HOXB13 (ENSMNEG00000036275) #14	PRAC2 (ENSMNEG00000038796)	PRAC1 (ENSMNEG00000045191) #15	HOXB9 (ENSMNEG00000045476) #16	HOXB8 (ENSMNEG00000034944) #17	HOXB7 (ENSMNEG00000040001) #18	HOXB6 (ENSMNEG00000042554) #19	HOXB5 (ENSMNEG00000039003) #20	HOXB4 (ENSMNEG00000032435) #21	HOXB3 (ENSMNEG00000032425) #22	HOXB2 (ENSMNEG00000043416) #23	HOXB1 (ENSMNEG00000036848) #24	ENSMNEG00000033446	SKAP1 (ENSMNEG00000015541) #25	SNX11 (ENSMNEG00000034920) #26	CBX1 (ENSMNEG00000039720) #27	NFE2L1 (ENSMNEG00000037921) #28	COPZ2 (ENSMNEG00000038720) #29	CDK5RAP3 (ENSMNEG00000029039) #30	PRR15L (ENSMNEG00000028174) #31	PNPO (ENSMNEG00000037010) #32	SP2 (ENSMNEG00000029577) #33	SP6 (ENSMNEG00000023861) #34	SCRN2 (ENSMNEG00000031786) #35	LRRC46 (ENSMNEG00000037035) #36
Vervet Monkey	MODERN SPECIES	7	B4GALNT2 (ENSCSAG00000002479)	IGF2BP1 (ENSCSAG00000002487)	GIP (ENSCSAG00000002491)	SNF8 (ENSCSAG00000002494) #8	UBE2Z (ENSCSAG00000002496) #10	ATP5MC1 (ENSCSAG00000002502) #11	CALCOCO2 (ENSCSAG00000002506) #12	TTLL6 (ENSCSAG00000002511) #13	HOXB13 (ENSCSAG00000002517) #14	HOXB9 (ENSCSAG00000002521) #16	HOXB8 (ENSCSAG00000002523) #17	HOXB7 (ENSCSAG00000002524) #18	HOXB6 (ENSCSAG00000002526) #19	HOXB5 (ENSCSAG00000002529) #20	HOXB4 (ENSCSAG00000002530) #21	HOXB3 (ENSCSAG00000002533) #22	HOXB2 (ENSCSAG00000002536) #23	HOXB1 (ENSCSAG00000002538) #24	ENSCSAG00000019043	SKAP1 (ENSCSAG00000002542) #25	SNX11 (ENSCSAG00000002545) #26	CBX1 (ENSCSAG00000002547) #27	NFE2L1 (ENSCSAG00000002550) #28	COPZ2 (ENSCSAG00000002558) #29	CDK5RAP3 (ENSCSAG00000002562) #30	PRR15L (ENSCSAG00000019042) #31	PNPO (ENSCSAG00000002565) #32	SP2 (ENSCSAG00000002567) #33	SP6 (ENSCSAG00000019041) #34	SCRN2 (ENSCSAG00000002569) #35	LRRC46 (ENSCSAG00000002574) #36
Rhinopithecus	ANCESTRAL SPECIES	19	ENSGT00390000005121	ENSGT00390000007843.u.a #8	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00860000135909	ENSGT00940000165611 #15	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603.b #37
Golden snub-nosed monkey	MODERN SPECIES	585	IGF2BP1 (ENSRROG00000039581)	GIP (ENSRROG00000029793)	SNF8 (ENSRROG00000041052) #8	UBE2Z (ENSRROG00000038314) #10	ATP5MC1 (ENSRROG00000031127) #11	CALCOCO2 (ENSRROG00000042598) #12	TTLL6 (ENSRROG00000044208) #13	HOXB13 (ENSRROG00000042147) #14	PRAC2 (ENSRROG00000033208)	PRAC1 (ENSRROG00000039006) #15	HOXB9 (ENSRROG00000044654) #16	HOXB8 (ENSRROG00000045349) #17	HOXB7 (ENSRROG00000035066) #18	HOXB6 (ENSRROG00000028093) #19	HOXB5 (ENSRROG00000030674) #20	HOXB3 (ENSRROG00000037630) #22	HOXB2 (ENSRROG00000044849) #23	HOXB1 (ENSRROG00000042747) #24	SKAP1 (ENSRROG00000031517) #25	SNX11 (ENSRROG00000029464) #26	CBX1 (ENSRROG00000041227) #27	NFE2L1 (ENSRROG00000044774) #28	COPZ2 (ENSRROG00000030969) #29	CDK5RAP3 (ENSRROG00000044651) #30	PRR15L (ENSRROG00000009484) #31	PNPO (ENSRROG00000044027) #32	SP2 (ENSRROG00000037481) #33	SP6 (ENSRROG00000008983) #34	SCRN2 (ENSRROG00000037252) #35	LRRC46 (ENSRROG00000039559) #36	MRPL10 (ENSRROG00000033938) #37
Black snub-nosed monkey	MODERN SPECIES	1661	GIP (ENSRBIG00000039886)	SNF8 (ENSRBIG00000038039) #8	UBE2Z (ENSRBIG00000038578) #10	ATP5MC1 (ENSRBIG00000026711) #11	CALCOCO2 (ENSRBIG00000035235) #12	TTLL6 (ENSRBIG00000035925) #13	HOXB13 (ENSRBIG00000035598) #14	PRAC2 (ENSRBIG00000032698)	PRAC1 (ENSRBIG00000041996) #15	HOXB9 (ENSRBIG00000035654) #16	HOXB8 (ENSRBIG00000043329) #17	HOXB7 (ENSRBIG00000039896) #18	HOXB6 (ENSRBIG00000029050) #19	HOXB5 (ENSRBIG00000015821) #20	HOXB4 (ENSRBIG00000036141) #21	HOXB3 (ENSRBIG00000036705) #22	HOXB2 (ENSRBIG00000029105) #23	HOXB1 (ENSRBIG00000041849) #24	SKAP1 (ENSRBIG00000042563) #25	SNX11 (ENSRBIG00000030129) #26	ENSRBIG00000027048 #27	NFE2L1 (ENSRBIG00000034817) #28	COPZ2 (ENSRBIG00000038810) #29	CDK5RAP3 (ENSRBIG00000039441) #30	PRR15L (ENSRBIG00000030176) #31	PNPO (ENSRBIG00000042160) #32	SP2 (ENSRBIG00000032526) #33	ENSRBIG00000039530	TXNDC2 (ENSRBIG00000040108)	ENSRBIG00000040735	OCRL (ENSRBIG00000041702)
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00390000005121	ENSGT00390000007843.u.a #8	ENSGT01100000264599 #9	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Mas night monkey	MODERN SPECIES	481	GIP (ENSANAG00000030188)	SNF8 (ENSANAG00000032764) #8	UBE2Z (ENSANAG00000029636) #10	ATP5MC1 (ENSANAG00000024881) #11	ENSANAG00000020581 #12	TTLL6 (ENSANAG00000031133) #13	PRAC2 (ENSANAG00000025557)	HOXB13 (ENSANAG00000023991) #14	ENSANAG00000030331	HOXB9 (ENSANAG00000035156) #16	HOXB8 (ENSANAG00000028346) #17	HOXB7 (ENSANAG00000025513) #18	HOXB6 (ENSANAG00000023964) #19	HOXB5 (ENSANAG00000024299) #20	HOXB4 (ENSANAG00000024005) #21	HOXB3 (ENSANAG00000032072) #22	HOXB2 (ENSANAG00000023626) #23	HOXB1 (ENSANAG00000032306) #24	ENSANAG00000023400	SKAP1 (ENSANAG00000026853) #25	SNX11 (ENSANAG00000022588) #26	ENSANAG00000036853 ##27	NFE2L1 (ENSANAG00000027606) #28	COPZ2 (ENSANAG00000023309) #29	CDK5RAP3 (ENSANAG00000021880) #30	PNPO (ENSANAG00000026080) #32	SP2 (ENSANAG00000032738) #33	SP6 (ENSANAG00000019338) #34	SCRN2 (ENSANAG00000021482) #35	LRRC46 (ENSANAG00000028496) #36	MRPL10 (ENSANAG00000022792) #37
Cebidae	ANCESTRAL SPECIES	10	ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.u.a #8	ENSGT01100000264599 #9	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00940000154172.gb.b.b.b	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT00390000007843.u.a #8	ENSGT01100000264599 #9	ENSGT00940000159091 #10	ENSGT00940000159720	ENSGT00950000183025.a.t.b #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00860000135909	ENSGT01050000247531	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00940000154172.gb.b.b.b	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36
Bolivian squirrel monkey	MODERN SPECIES	86	SNF8 (ENSSBOG00000026186) #8	ENSSBOG00000028176 #9	UBE2Z (ENSSBOG00000036224) #10	ENSSBOG00000028794	CALCOCO2 (ENSSBOG00000035276) #12	TTLL6 (ENSSBOG00000028908) #13	HOXB13 (ENSSBOG00000029964) #14	PRAC2 (ENSSBOG00000032603)	ENSSBOG00000030794	HOXB9 (ENSSBOG00000030218) #16	HOXB8 (ENSSBOG00000034884) #17	HOXB7 (ENSSBOG00000020028) #18	HOXB6 (ENSSBOG00000031900) #19	HOXB5 (ENSSBOG00000018198) #20	HOXB4 (ENSSBOG00000024432) #21	HOXB3 (ENSSBOG00000030844) #22	HOXB2 (ENSSBOG00000025070) #23	HOXB1 (ENSSBOG00000034875) #24	ENSSBOG00000019520	SKAP1 (ENSSBOG00000029434) #25	SNX11 (ENSSBOG00000026967) #26	ENSSBOG00000031880 ##27	NFE2L1 (ENSSBOG00000023867) #28	COPZ2 (ENSSBOG00000033633) #29	CDK5RAP3 (ENSSBOG00000033272) #30	PRR15L (ENSSBOG00000019240) #31	PNPO (ENSSBOG00000021213) #32	SP2 (ENSSBOG00000029098) #33	SP6 (ENSSBOG00000014210) #34	SCRN2 (ENSSBOG00000027391) #35	LRRC46 (ENSSBOG00000026980) #36
Capuchin	MODERN SPECIES	228							HOXB13 (ENSCCAG00000036871) #14	ENSCCAG00000036164	ENSCCAG00000019672	HOXB7 (ENSCCAG00000023947) #18	HOXB9 (ENSCCAG00000035938) #16	HOXB8 (ENSCCAG00000026051) #17	HOXB6 (ENSCCAG00000022842) #19	HOXB5 (ENSCCAG00000036867) #20	HOXB4 (ENSCCAG00000020311) #21	HOXB3 (ENSCCAG00000013598) #22	HOXB2 (ENSCCAG00000024035) #23	HOXB1 (ENSCCAG00000027667) #24	ENSCCAG00000019181	SKAP1 (ENSCCAG00000035663) #25	SNX11 (ENSCCAG00000030167) #26	CBX1 (ENSCCAG00000025085) #27	NFE2L1 (ENSCCAG00000029090) #28	COPZ2 (ENSCCAG00000021292) #29	CDK5RAP3 (ENSCCAG00000038053) #30	PNPO (ENSCCAG00000029175) #32	SP2 (ENSCCAG00000038047) #33	SP6 (ENSCCAG00000020330) #34	SCRN2 (ENSCCAG00000031435) #35	LRRC46 (ENSCCAG00000030568) #36	MRPL10 (ENSCCAG00000023150) #37
Marmoset	MODERN SPECIES	17	ENSCJAG00000079002	IGF2BP1 (ENSCJAG00000007258)	GIP (ENSCJAG00000007300)	SNF8 (ENSCJAG00000007322) #8	UBE2Z (ENSCJAG00000007326) #10	ATP5MC1 (ENSCJAG00000075375) #11	CALCOCO2 (ENSCJAG00000007375) #12	TTLL6 (ENSCJAG00000007395) #13	HOXB13 (ENSCJAG00000007437) #14	HOXB9 (ENSCJAG00000007442) #16	HOXB8 (ENSCJAG00000045730) #17	HOXB7 (ENSCJAG00000007457) #18	HOXB6 (ENSCJAG00000007467) #19	HOXB5 (ENSCJAG00000007472) #20	HOXB4 (ENSCJAG00000007480) #21	HOXB3 (ENSCJAG00000007487) #22	HOXB2 (ENSCJAG00000007494) #23	HOXB1 (ENSCJAG00000007496) #24	ENSCJAG00000038853	SKAP1 (ENSCJAG00000007504) #25	SNX11 (ENSCJAG00000039549) #26	CBX1 (ENSCJAG00000042052) #27	NFE2L1 (ENSCJAG00000007542) #28	ENSCJAG00000058197	COPZ2 (ENSCJAG00000007567) #29	CDK5RAP3 (ENSCJAG00000007669) #30	PRR15L (ENSCJAG00000044487) #31	PNPO (ENSCJAG00000007693) #32	SP2 (ENSCJAG00000007713) #33	SP6 (ENSCJAG00000043946) #34	SCRN2 (ENSCJAG00000047705) #35
Tarsier	MODERN SPECIES	4193											HOXB7 (ENSTSYG00000028173) #18	HOXB6 (ENSTSYG00000031001) #19	HOXB5 (ENSTSYG00000032912) #20	HOXB4 (ENSTSYG00000026874) #21	ENSTSYG00000029322	HOXB3 (ENSTSYG00000035231) #22	HOXB2 (ENSTSYG00000004903) #23	HOXB1 (ENSTSYG00000004656) #24
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00950000185410	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590.h #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00950000185410	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590.h #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36
Lemuriformes_a	ANCESTRAL SPECIES		ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00950000185410	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590.h #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36
Coquerels sifaka	MODERN SPECIES	120	ENSPCOG00000018672	IGF2BP1 (ENSPCOG00000006475)	GIP (ENSPCOG00000024832)	SNF8 (ENSPCOG00000026895) #8	UBE2Z (ENSPCOG00000014816) #10	ENSPCOG00000008741	CALCOCO2 (ENSPCOG00000021998) #12	TTLL6 (ENSPCOG00000021391) #13	HOXB13 (ENSPCOG00000018182) #14	HOXB9 (ENSPCOG00000027130) #16	HOXB8 (ENSPCOG00000024853) #17	HOXB7 (ENSPCOG00000028248) #18	HOXB6 (ENSPCOG00000019931) #19	HOXB5 (ENSPCOG00000015692) #20	HOXB4 (ENSPCOG00000022963) #21	HOXB3 (ENSPCOG00000020113) #22	HOXB2 (ENSPCOG00000017380) #23	HOXB1 (ENSPCOG00000025930) #24	SKAP1 (ENSPCOG00000022221) #25	SNX11 (ENSPCOG00000011015) #26	ENSPCOG00000010902 #27	NFE2L1 (ENSPCOG00000021740) #28	COPZ2 (ENSPCOG00000018359) #29	CDK5RAP3 (ENSPCOG00000016598) #30	PNPO (ENSPCOG00000017906) #32	SP2 (ENSPCOG00000017198) #33	SP6 (ENSPCOG00000008529) #34	SCRN2 (ENSPCOG00000014438) #35	LRRC46 (ENSPCOG00000015829) #36	MRPL10 (ENSPCOG00000025492) #37	OSBPL7 (ENSPCOG00000019714)
Greater bamboo lemur	MODERN SPECIES	168		IGF2BP1 (ENSPSMG00000020445)	GIP (ENSPSMG00000020432)	SNF8 (ENSPSMG00000020426) #8	UBE2Z (ENSPSMG00000020387) #10	ENSPSMG00000020369	CALCOCO2 (ENSPSMG00000020308) #12	ENSPSMG00000020243 #13	HOXB13 (ENSPSMG00000020237) #14	HOXB9 (ENSPSMG00000020232) #16	HOXB8 (ENSPSMG00000020227) #17	HOXB7 (ENSPSMG00000020218) #18	HOXB6 (ENSPSMG00000020209) #19	HOXB5 (ENSPSMG00000020200) #20	HOXB4 (ENSPSMG00000020187) #21	HOXB3 (ENSPSMG00000020182) #22	HOXB2 (ENSPSMG00000020176) #23	HOXB1 (ENSPSMG00000020167) #24	SKAP1 (ENSPSMG00000020161) #25	SNX11 (ENSPSMG00000020139) #26	CBX1 (ENSPSMG00000020119) #27
Mouse lemur	MODERN SPECIES	7	ENSMICG00000037104	ENSMICG00000013324	GIP (ENSMICG00000013317)	SNF8 (ENSMICG00000013305) #8	UBE2Z (ENSMICG00000046102) #10	ENSMICG00000003414	CALCOCO2 (ENSMICG00000015330) #12	TTLL6 (ENSMICG00000007549) #13	HOXB13 (ENSMICG00000007546) #14	HOXB9 (ENSMICG00000038413) #16	HOXB8 (ENSMICG00000045961) #17	HOXB7 (ENSMICG00000007539) #18	HOXB6 (ENSMICG00000042216) #19	HOXB5 (ENSMICG00000047139) #20	HOXB4 (ENSMICG00000043173) #21	HOXB3 (ENSMICG00000007522) #22	HOXB2 (ENSMICG00000038222) #23	HOXB1 (ENSMICG00000048152) #24	SKAP1 (ENSMICG00000047158) #25	ENSMICG00000029923	SNX11 (ENSMICG00000014741) #26	NFE2L1 (ENSMICG00000014716) #28	ENSMICG00000009510 #27	COPZ2 (ENSMICG00000014097) #29	CDK5RAP3 (ENSMICG00000014077) #30	ENSMICG00000014065 #32	SP2 (ENSMICG00000036051) #33	SP6 (ENSMICG00000047695) #34	SCRN2 (ENSMICG00000004823) #35	LRRC46 (ENSMICG00000004816) #36	MRPL10 (ENSMICG00000048091) #37
Bushbaby	MODERN SPECIES	133	IGF2BP1 (ENSOGAG00000001270)	GIP (ENSOGAG00000010130)	ENSOGAG00000001269 #8	UBE2Z (ENSOGAG00000001267) #10	ATP5MC1 (ENSOGAG00000011713) #11	CALCOCO2 (ENSOGAG00000011709) #12	TTLL6 (ENSOGAG00000011701) #13	HOXB13 (ENSOGAG00000032643) #14	ENSOGAG00000034464	HOXB9 (ENSOGAG00000008668) #16	HOXB8 (ENSOGAG00000029480) #17	HOXB7 (ENSOGAG00000008667) #18	HOXB6 (ENSOGAG00000008661) #19	HOXB5 (ENSOGAG00000032432) #20	HOXB4 (ENSOGAG00000033709) #21	HOXB3 (ENSOGAG00000032090) #22	HOXB2 (ENSOGAG00000029280) #23	HOXB1 (ENSOGAG00000031645) #24	SKAP1 (ENSOGAG00000015855) #25	SNX11 (ENSOGAG00000015854) #26	CBX1 (ENSOGAG00000005658) #27	NFE2L1 (ENSOGAG00000025191) #28	COPZ2 (ENSOGAG00000004954) #29	CDK5RAP3 (ENSOGAG00000004951) #30	PRR15L (ENSOGAG00000006187) #31	PNPO (ENSOGAG00000006186) #32	SP2 (ENSOGAG00000030380) #33	SP6 (ENSOGAG00000030282) #34	SCRN2 (ENSOGAG00000006181) #35	LRRC46 (ENSOGAG00000006177) #36	MRPL10 (ENSOGAG00000006173) #37
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00990000209473	ENSGT00940000159091 #10	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Tree shrew	MODERN SPECIES	851																HOXB3 (ENSTBEG00000015809) #22
Glires	ANCESTRAL SPECIES	3	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00990000209473	ENSGT00940000159091 #10	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00990000209473	ENSGT00940000159091 #10	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00990000209473	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00990000209473	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Marmotini	ANCESTRAL SPECIES	8	ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Squirrel	MODERN SPECIES	90	IGF2BP1 (ENSSTOG00000010643)	GIP (ENSSTOG00000004043)	SNF8 (ENSSTOG00000004023) #8	UBE2Z (ENSSTOG00000000796) #10	ATP5MC1 (ENSSTOG00000013404) #11	ENSSTOG00000013395 #12	TTLL6 (ENSSTOG00000006016) #13	ENSSTOG00000025444	HOXB13 (ENSSTOG00000014942) #14	HOXB9 (ENSSTOG00000009741) #16	HOXB8 (ENSSTOG00000028337) #17	HOXB7 (ENSSTOG00000025657) #18	HOXB6 (ENSSTOG00000020303) #19	HOXB5 (ENSSTOG00000009740) #20	HOXB4 (ENSSTOG00000009734) #21	HOXB3 (ENSSTOG00000025093) #22	HOXB2 (ENSSTOG00000023586) #23	HOXB1 (ENSSTOG00000028630) #24	SKAP1 (ENSSTOG00000013692) #25	SNX11 (ENSSTOG00000013684) #26	CBX1 (ENSSTOG00000023986) #27	NFE2L1 (ENSSTOG00000013664) #28	ENSSTOG00000027550 #29	CDK5RAP3 (ENSSTOG00000006244) #30	PRR15L (ENSSTOG00000006235) #31	PNPO (ENSSTOG00000006221) #32	SP2 (ENSSTOG00000015926) #33	SP6 (ENSSTOG00000001607) #34	SCRN2 (ENSSTOG00000027108) #35	LRRC46 (ENSSTOG00000002068) #36	MRPL10 (ENSSTOG00000024617) #37
Arctic ground squirrel	MODERN SPECIES	46	B4GALNT2 (ENSUPAG00010006086)	IGF2BP1 (ENSUPAG00010006100)	GIP (ENSUPAG00010006136)	SNF8 (ENSUPAG00010006148) #8	UBE2Z (ENSUPAG00010006178) #10	ENSUPAG00010006195	CALCOCO2 (ENSUPAG00010006243) #12	TTLL6 (ENSUPAG00010006267) #13	HOXB13 (ENSUPAG00010006301) #14	HOXB9 (ENSUPAG00010006305) #16	HOXB8 (ENSUPAG00010006310) #17	HOXB7 (ENSUPAG00010006312) #18	HOXB6 (ENSUPAG00010006317) #19	HOXB5 (ENSUPAG00010006320) #20	HOXB4 (ENSUPAG00010006325) #21	HOXB3 (ENSUPAG00010006328) #22	HOXB2 (ENSUPAG00010006336) #23	HOXB1 (ENSUPAG00010006340) #24	SKAP1 (ENSUPAG00010006345) #25	SNX11 (ENSUPAG00010006370) #26	CBX1 (ENSUPAG00010006381) #27	NFE2L1 (ENSUPAG00010006396) #28	COPZ2 (ENSUPAG00010006455) #29	CDK5RAP3 (ENSUPAG00010006466) #30	PRR15L (ENSUPAG00010006473) #31	PNPO (ENSUPAG00010006483) #32	SP2 (ENSUPAG00010006507) #33	SP6 (ENSUPAG00010006522) #34	SCRN2 (ENSUPAG00010006526) #35	LRRC46 (ENSUPAG00010006533) #36	MRPL10 (ENSUPAG00010006539) #37
Alpin marmot	MODERN SPECIES	42	ABI3 (ENSMMMG00000000452)	GNGT2 (ENSMMMG00000000525)	B4GALNT2 (ENSMMMG00000000569)	IGF2BP1 (ENSMMMG00000000613)	GIP (ENSMMMG00000000652)	SNF8 (ENSMMMG00000000680) #8	UBE2Z (ENSMMMG00000000717) #10	ATP5MC1 (ENSMMMG00000000731) #11	ENSMMMG00000000759 #12	TTLL6 (ENSMMMG00000001013) #13	HOXB13 (ENSMMMG00000001064) #14	HOXB7 (ENSMMMG00000001087) #18	HOXB6 (ENSMMMG00000001098) #19	HOXB5 (ENSMMMG00000001112) #20	HOXB4 (ENSMMMG00000001129) #21	HOXB3 (ENSMMMG00000001139) #22	HOXB1 (ENSMMMG00000001151) #24	SKAP1 (ENSMMMG00000001168) #25	SNX11 (ENSMMMG00000001243) #26	CBX1 (ENSMMMG00000001254) #27	NFE2L1 (ENSMMMG00000001284) #28	COPZ2 (ENSMMMG00000001352) #29	CDK5RAP3 (ENSMMMG00000001404) #30	GOSR2 (ENSMMMG00000001471)	RPRML (ENSMMMG00000001486)	LYZL6 (ENSMMMG00000001501)	ENSMMMG00000001520	ENSMMMG00000001551	ENSMMMG00000001756	ENSMMMG00000001792	MAP3K14 (ENSMMMG00000002213)
Eurasian red squirrel	MODERN SPECIES	12	IGF2BP1 (ENSSVLG00005020596)	GIP (ENSSVLG00005020522)	SNF8 (ENSSVLG00005020472) #8	ENSSVLG00005020450	UBE2Z (ENSSVLG00005020428) #10	ATP5MC1 (ENSSVLG00005020344) #11	CALCOCO2 (ENSSVLG00005020296) #12	TTLL6 (ENSSVLG00005020005) #13	HOXB13 (ENSSVLG00005019820) #14	HOXB9 (ENSSVLG00005019725) #16	HOXB8 (ENSSVLG00005019675) #17	HOXB7 (ENSSVLG00005019618) #18	HOXB6 (ENSSVLG00005019586) #19	HOXB5 (ENSSVLG00005019546) #20	HOXB4 (ENSSVLG00005019455) #21	HOXB3 (ENSSVLG00005019421) #22	HOXB2 (ENSSVLG00005019378) #23	HOXB1 (ENSSVLG00005019304) #24	SKAP1 (ENSSVLG00005019232) #25	SNX11 (ENSSVLG00005019122) #26	CBX1 (ENSSVLG00005019034) #27	NFE2L1 (ENSSVLG00005018798) #28	COPZ2 (ENSSVLG00005018641) #29	CDK5RAP3 (ENSSVLG00005018459) #30	PRR15L (ENSSVLG00005018399) #31	PNPO (ENSSVLG00005018295) #32	ENSSVLG00005018218 #33	SP6 (ENSSVLG00005018194) #34	SCRN2 (ENSSVLG00005018077) #35	LRRC46 (ENSSVLG00005018036) #36	MRPL10 (ENSSVLG00005017985) #37
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Naked mole-rat female	MODERN SPECIES	12	IGF2BP1 (ENSHGLG00000010492)	ENSHGLG00000010703	SNF8 (ENSHGLG00000011519) #8	UBE2Z (ENSHGLG00000016280) #10	ATP5MC1 (ENSHGLG00000035460) #11	CALCOCO2 (ENSHGLG00000012114) #12	TTLL6 (ENSHGLG00000019187) #13	HOXB13 (ENSHGLG00000014634) #14	ENSHGLG00000048296	HOXB9 (ENSHGLG00000014731) #16	HOXB8 (ENSHGLG00000038380) #17	HOXB7 (ENSHGLG00000045318) #18	HOXB6 (ENSHGLG00000012400) #19	HOXB5 (ENSHGLG00000039265) #20	HOXB4 (ENSHGLG00000034075) #21	HOXB3 (ENSHGLG00000010686) #22	HOXB2 (ENSHGLG00000010090) #23	HOXB1 (ENSHGLG00000009781) #24	SKAP1 (ENSHGLG00000014563) #25	SNX11 (ENSHGLG00000016837) #26	CBX1 (ENSHGLG00000013574) #27	NFE2L1 (ENSHGLG00000012592) #28	COPZ2 (ENSHGLG00000018543) #29	CDK5RAP3 (ENSHGLG00000019464) #30	PRR15L (ENSHGLG00000014696) #31	PNPO (ENSHGLG00000013159) #32	SP2 (ENSHGLG00000009902) #33	SP6 (ENSHGLG00000021113) #34	SCRN2 (ENSHGLG00000041375) #35	LRRC46 (ENSHGLG00000035931) #36	MRPL10 (ENSHGLG00000048399) #37
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Guinea pig	MODERN SPECIES	53	ENSCPOG00000020987	GNGT2 (ENSCPOG00000030054)	B4GALNT2 (ENSCPOG00000006191)	IGF2BP1 (ENSCPOG00000020174)	GIP (ENSCPOG00000023966)	SNF8 (ENSCPOG00000020610) #8	UBE2Z (ENSCPOG00000024416) #10	ENSCPOG00000009017 #11	CALCOCO2 (ENSCPOG00000021273) #12	TTLL6 (ENSCPOG00000012509) #13	HOXB13 (ENSCPOG00000013509) #14	HOXB9 (ENSCPOG00000037597) #16	HOXB6 (ENSCPOG00000040707) #19	HOXB5 (ENSCPOG00000030746) #20	ENSCPOG00000010105	ENSCPOG00000010107 #22	HOXB2 (ENSCPOG00000035468) #23	HOXB1 (ENSCPOG00000022183) #24	SKAP1 (ENSCPOG00000022118) #25	SNX11 (ENSCPOG00000020234) #26	CBX1 (ENSCPOG00000034435) #27	NFE2L1 (ENSCPOG00000030805) #28	COPZ2 (ENSCPOG00000019500) #29	CDK5RAP3 (ENSCPOG00000007275) #30	PRR15L (ENSCPOG00000035567) #31	PNPO (ENSCPOG00000003187) #32	SP2 (ENSCPOG00000014943) #33	SP6 (ENSCPOG00000007638) #34	SCRN2 (ENSCPOG00000006929) #35	LRRC46 (ENSCPOG00000006925) #36	MRPL10 (ENSCPOG00000037104) #37
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Long-tailed chinchilla	MODERN SPECIES	158	GNGT2 (ENSCLAG00000014970)	B4GALNT2 (ENSCLAG00000016224)	IGF2BP1 (ENSCLAG00000015853)	ENSCLAG00000014301	SNF8 (ENSCLAG00000013387) #8	UBE2Z (ENSCLAG00000016068) #10	ATP5MC1 (ENSCLAG00000015723) #11	CALCOCO2 (ENSCLAG00000015881) #12	TTLL6 (ENSCLAG00000013529) #13	HOXB13 (ENSCLAG00000014855) #14	ENSCLAG00000015198 #16	HOXB7 (ENSCLAG00000014906) #18	HOXB6 (ENSCLAG00000015524) #19	HOXB5 (ENSCLAG00000014374) #20	HOXB4 (ENSCLAG00000014725) #21	HOXB3 (ENSCLAG00000015322) #22	HOXB2 (ENSCLAG00000015271) #23	HOXB1 (ENSCLAG00000013047) #24	SKAP1 (ENSCLAG00000015423) #25	SNX11 (ENSCLAG00000015837) #26	CBX1 (ENSCLAG00000013587) #27	NFE2L1 (ENSCLAG00000014836) #28	COPZ2 (ENSCLAG00000013544) #29	CDK5RAP3 (ENSCLAG00000012292) #30	PRR15L (ENSCLAG00000017903) #31	PNPO (ENSCLAG00000013871) #32	SP2 (ENSCLAG00000014115) #33	SP6 (ENSCLAG00000016276) #34	LRRC46 (ENSCLAG00000016713) #36	SCRN2 (ENSCLAG00000013965) #35	MRPL10 (ENSCLAG00000015400) #37
Degu	MODERN SPECIES	97	GNGT2 (ENSODEG00000017526)	B4GALNT2 (ENSODEG00000018456)	ENSODEG00000016991	ENSODEG00000017109	GIP (ENSODEG00000017003)	ENSODEG00000017032 #8	UBE2Z (ENSODEG00000017306) #10	ATP5MC1 (ENSODEG00000017366) #11	TTLL6 (ENSODEG00000017145) #13	HOXB13 (ENSODEG00000017199) #14	HOXB9 (ENSODEG00000017293) #16	HOXB8 (ENSODEG00000017119) #17	HOXB6 (ENSODEG00000016988) #19	HOXB5 (ENSODEG00000017253) #20	HOXB4 (ENSODEG00000017038) #21	HOXB3 (ENSODEG00000017116) #22	HOXB2 (ENSODEG00000017153) #23	HOXB1 (ENSODEG00000017050) #24	SKAP1 (ENSODEG00000017533) #25	SNX11 (ENSODEG00000017458) #26	CBX1 (ENSODEG00000017272) #27	NFE2L1 (ENSODEG00000017348) #28	ENSODEG00000020421	COPZ2 (ENSODEG00000017565) #29	ENSODEG00000017229 #30	PNPO (ENSODEG00000017424) #32	SP2 (ENSODEG00000017126) #33	SP6 (ENSODEG00000017625) #34	SCRN2 (ENSODEG00000017395) #35	LRRC46 (ENSODEG00000017367) #36	MRPL10 (ENSODEG00000017536) #37
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Myomorpha	ANCESTRAL SPECIES		ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Muroidea	ANCESTRAL SPECIES		ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000159720.`b.a.a	ENSGT00940000159720.ab	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.a.a ##27	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000159720.`b.a.a	ENSGT00940000159720.`b.b	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.a.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Golden Hamster	MODERN SPECIES	674	Abi3 (ENSMAUG00000021085)	Gngt2 (ENSMAUG00000019144)	B4galnt2 (ENSMAUG00000007916)	Gip (ENSMAUG00000009238)	Snf8 (ENSMAUG00000001857) #8	Ube2z (ENSMAUG00000007792) #10	ENSMAUG00000021751	Ttll6 (ENSMAUG00000020973) #13	Hoxb13 (ENSMAUG00000008407) #14	Hoxb9 (ENSMAUG00000017720) #16	Hoxb8 (ENSMAUG00000012636) #17	Hoxb7 (ENSMAUG00000021297) #18	Hoxb6 (ENSMAUG00000021423) #19	Hoxb5 (ENSMAUG00000021419) #20	Hoxb4 (ENSMAUG00000009367) #21	Hoxb3 (ENSMAUG00000011251) #22	Hoxb2 (ENSMAUG00000021979) #23	Hoxb1 (ENSMAUG00000013237) #24	Skap1 (ENSMAUG00000022191) #25	Snx11 (ENSMAUG00000021528) #26	ENSMAUG00000003463 #27	Nfe2l1 (ENSMAUG00000020456) #28	Copz2 (ENSMAUG00000010560) #29	Cdk5rap3 (ENSMAUG00000007991) #30	Pnpo (ENSMAUG00000021706) #32	Sp2 (ENSMAUG00000019269) #33	Sp6 (ENSMAUG00000009667) #34	Scrn2 (ENSMAUG00000010014) #35	Lrrc46 (ENSMAUG00000019416) #36	Mrpl10 (ENSMAUG00000000820) #37	Osbpl7 (ENSMAUG00000013876)
Chinese hamster chok1gshd	MODERN SPECIES	33	Lrrc46 (ENSCGRG00001019758) #36	Scrn2 (ENSCGRG00001022143) #35	Sp6 (ENSCGRG00001002797) #34	Sp2 (ENSCGRG00001010976) #33	Pnpo (ENSCGRG00001018189) #32	Prr15l (ENSCGRG00001008926) #31	Cdk5rap3 (ENSCGRG00001006966) #30	Copz2 (ENSCGRG00001014767) #29	Nfe2l1 (ENSCGRG00001015287) #28	Cbx1 (ENSCGRG00001014799) ##27	Snx11 (ENSCGRG00001022221) #26	ENSCGRG00001020759 #25	ENSCGRG00001023355 #25	Hoxb1 (ENSCGRG00001024619) #24	Hoxb2 (ENSCGRG00001017587) #23	Hoxb3 (ENSCGRG00001016667) #22	Hoxb4 (ENSCGRG00001022431) #21	Hoxb5 (ENSCGRG00001016167) #20	Hoxb6 (ENSCGRG00001015674) #19	Hoxb7 (ENSCGRG00001021590) #18	Hoxb8 (ENSCGRG00001020235) #17	Hoxb9 (ENSCGRG00001015314) #16	Hoxb13 (ENSCGRG00001015060) #14	Ttll6 (ENSCGRG00001018398) #13	ENSCGRG00001011435 #12	ENSCGRG00001010560	ENSCGRG00001022606	Ube2z (ENSCGRG00001019150) #10	Snf8 (ENSCGRG00001000737) #8	Gip (ENSCGRG00001021533)	ENSCGRG00001000282
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000159720.`b.a.a	ENSGT00940000159720.ab	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Prairie vole	MODERN SPECIES	114			ENSMOCG00000004266	ENSMOCG00000021226	Snf8 (ENSMOCG00000016684) #8	Ube2z (ENSMOCG00000018241) #10	ENSMOCG00000013163	Ttll6 (ENSMOCG00000021089) #13	Hoxb13 (ENSMOCG00000021389) #14	Hoxb9 (ENSMOCG00000020312) #16	Hoxb8 (ENSMOCG00000018435) #17	Hoxb7 (ENSMOCG00000020820) #18	Hoxb6 (ENSMOCG00000020355) #19	Hoxb5 (ENSMOCG00000014523) #20	Hoxb4 (ENSMOCG00000022964) #21	Hoxb3 (ENSMOCG00000020739) #22	Hoxb2 (ENSMOCG00000014846) #23	Hoxb1 (ENSMOCG00000002452) #24	Skap1 (ENSMOCG00000018431) #25	Snx11 (ENSMOCG00000019303) #26	Cbx1 (ENSMOCG00000001520) #27	Nfe2l1 (ENSMOCG00000016002) #28	Copz2 (ENSMOCG00000022427) #29	Cdk5rap3 (ENSMOCG00000019534) #30	Prr15l (ENSMOCG00000006695) #31	Pnpo (ENSMOCG00000011655) #32	Sp2 (ENSMOCG00000020935) #33	Sp6 (ENSMOCG00000007065) #34	Scrn2 (ENSMOCG00000019511) #35	Lrrc46 (ENSMOCG00000016707) #36	Mrpl10 (ENSMOCG00000019451) #37
Northern American deer mouse	MODERN SPECIES	21	Abi3 (ENSPEMG00000014242)	Gngt2 (ENSPEMG00000027491)	B4galnt2 (ENSPEMG00000020717)	Igf2bp1 (ENSPEMG00000021974)	Gip (ENSPEMG00000021184)	Snf8 (ENSPEMG00000022229) #8	Ube2z (ENSPEMG00000020953) #10	Atp5g1 (ENSPEMG00000020590)	ENSPEMG00000028729 #12	ENSPEMG00000025676 #12	Ttll6 (ENSPEMG00000021918) #13	Hoxb13 (ENSPEMG00000021511) #14	Hoxb9 (ENSPEMG00000027158) #16	Hoxb5 (ENSPEMG00000030101) #20	Hoxb4 (ENSPEMG00000029805) #21	Hoxb3 (ENSPEMG00000028692) #22	Hoxb2 (ENSPEMG00000029510) #23	Hoxb1 (ENSPEMG00000023977) #24	Skap1 (ENSPEMG00000000585) #25	ENSPEMG00000020286	Snx11 (ENSPEMG00000000381) #26	Cbx1 (ENSPEMG00000020976) ##27	Nfe2l1 (ENSPEMG00000010512) #28	Copz2 (ENSPEMG00000011137) #29	Cdk5rap3 (ENSPEMG00000020712) #30	ENSPEMG00000030963	Prr15l (ENSPEMG00000024436) #31	Pnpo (ENSPEMG00000025094) #32	Sp2 (ENSPEMG00000017112) #33	Sp6 (ENSPEMG00000001231) #34	Scrn2 (ENSPEMG00000020381) #35
Murinae	ANCESTRAL SPECIES	6	ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Mus	ANCESTRAL SPECIES	2	ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36
Mus_A	ANCESTRAL SPECIES	2	ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36
Mus_B	ANCESTRAL SPECIES	2	ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36
Mus_C	ANCESTRAL SPECIES	3	ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000159720	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36
Steppe mouse	MODERN SPECIES	3291	Igf2bp1 (ENSMSIG00000019193)	Gip (ENSMSIG00000019162)	Snf8 (ENSMSIG00000019072) #8	Ube2z (ENSMSIG00000019038) #10	Atp5g1 (ENSMSIG00000018986)	ENSMSIG00000018956 #12	Ttll6 (ENSMSIG00000018881) #13	Hoxb13 (ENSMSIG00000018865) #14	Hoxb9 (ENSMSIG00000018823) #16	Hoxb8 (ENSMSIG00000018807) #17	Hoxb7 (ENSMSIG00000018805) #18	Hoxb6 (ENSMSIG00000018795) #19	Hoxb5 (ENSMSIG00000018787) #20	Hoxb4 (ENSMSIG00000018777) #21	ENSMSIG00000018776	Hoxb3 (ENSMSIG00000018771) #22	Hoxb2 (ENSMSIG00000018769) #23	Hoxb1 (ENSMSIG00000018752) #24	Skap1 (ENSMSIG00000018601) #25	Snx11 (ENSMSIG00000018546) #26	ENSMSIG00000018520	Cbx1 (ENSMSIG00000018447) #27	Nfe2l1 (ENSMSIG00000018374) #28	Copz2 (ENSMSIG00000018337) #29	Cdk5rap3 (ENSMSIG00000018309) #30	ENSMSIG00000018270 #31	ENSMSIG00000018267 #32	Sp2 (ENSMSIG00000018237) #33	Sp6 (ENSMSIG00000018223) #34	Scrn2 (ENSMSIG00000018202) #35	Lrrc46 (ENSMSIG00000018171) #36
spretus	MODERN SPECIES	2	B4galnt2 (MGP_SPRETEiJ_G0017861)	Igf2bp1 (MGP_SPRETEiJ_G0017862)	Gip (MGP_SPRETEiJ_G0017863)	Snf8 (MGP_SPRETEiJ_G0017864) #8	Ube2z (MGP_SPRETEiJ_G0017865) #10	Atp5g1 (MGP_SPRETEiJ_G0017866)	MGP_SPRETEiJ_G0017867 #12	Ttll6 (MGP_SPRETEiJ_G0017868) #13	Hoxb13 (MGP_SPRETEiJ_G0017869) #14	Hoxb9 (MGP_SPRETEiJ_G0017870) #16	Hoxb8 (MGP_SPRETEiJ_G0017871) #17	Hoxb7 (MGP_SPRETEiJ_G0017872) #18	Hoxb6 (MGP_SPRETEiJ_G0017873) #19	Hoxb5 (MGP_SPRETEiJ_G0017874) #20	Hoxb4 (MGP_SPRETEiJ_G0017875) #21	Hoxb3 (MGP_SPRETEiJ_G0017876) #22	Hoxb2 (MGP_SPRETEiJ_G0017877) #23	Hoxb1 (MGP_SPRETEiJ_G0017878) #24	MGP_SPRETEiJ_G0017879 #25	Snx11 (MGP_SPRETEiJ_G0017880) #26	Cbx1 (MGP_SPRETEiJ_G0017881) #27	MGP_SPRETEiJ_G0017882	Nfe2l1 (MGP_SPRETEiJ_G0017883) #28	Copz2 (MGP_SPRETEiJ_G0017884) #29	Cdk5rap3 (MGP_SPRETEiJ_G0017885) #30	Prr15l (MGP_SPRETEiJ_G0017886) #31	Pnpo (MGP_SPRETEiJ_G0017887) #32	Sp2 (MGP_SPRETEiJ_G0017888) #33	Sp6 (MGP_SPRETEiJ_G0017889) #34	Scrn2 (MGP_SPRETEiJ_G0017890) #35	Lrrc46 (MGP_SPRETEiJ_G0017891) #36
Mouse	MODERN SPECIES	2	B4galnt2 (ENSMUSG00000013418)	Igf2bp1 (ENSMUSG00000013415)	Gip (ENSMUSG00000014351)	Snf8 (ENSMUSG00000006058) #8	Ube2z (ENSMUSG00000014349) #10	Atp5g1 (ENSMUSG00000006057)	Calcoco2 (ENSMUSG00000006056) #12	Ttll6 (ENSMUSG00000038756) #13	Hoxb13 (ENSMUSG00000049604) #14	Hoxb9 (ENSMUSG00000020875) #16	Hoxb8 (ENSMUSG00000056648) #17	Hoxb7 (ENSMUSG00000038721) #18	Hoxb6 (ENSMUSG00000000690) #19	Hoxb5 (ENSMUSG00000038700) #20	Hoxb4 (ENSMUSG00000038692) #21	Hoxb3 (ENSMUSG00000048763) #22	Hoxb2 (ENSMUSG00000075588) #23	Hoxb1 (ENSMUSG00000018973) #24	Skap1 (ENSMUSG00000057058) #25	Snx11 (ENSMUSG00000020876) #26	Cbx1 (ENSMUSG00000018666) #27	Nfe2l1 (ENSMUSG00000038615) #28	Copz2 (ENSMUSG00000018672) #29	Cdk5rap3 (ENSMUSG00000018669) #30	Prr15l (ENSMUSG00000047040) #31	Pnpo (ENSMUSG00000018659) #32	Sp2 (ENSMUSG00000018678) #33	Sp6 (ENSMUSG00000038560) #34	Scrn2 (ENSMUSG00000020877) #35	Lrrc46 (ENSMUSG00000020878) #36	Mrpl10 (ENSMUSG00000001445) #37
Ryukyu mouse	MODERN SPECIES	2	B4galnt2 (MGP_CAROLIEiJ_G0017015)	Igf2bp1 (MGP_CAROLIEiJ_G0017016)	Gip (MGP_CAROLIEiJ_G0017017)	Snf8 (MGP_CAROLIEiJ_G0017018) #8	MGP_CAROLIEiJ_G0017019 #10	MGP_CAROLIEiJ_G0017020	MGP_CAROLIEiJ_G0017021 #12	Ttll6 (MGP_CAROLIEiJ_G0017022) #13	Hoxb13 (MGP_CAROLIEiJ_G0017023) #14	Hoxb9 (MGP_CAROLIEiJ_G0017024) #16	Hoxb8 (MGP_CAROLIEiJ_G0017025) #17	Hoxb7 (MGP_CAROLIEiJ_G0017026) #18	Hoxb6 (MGP_CAROLIEiJ_G0017027) #19	Hoxb5 (MGP_CAROLIEiJ_G0017028) #20	Hoxb4 (MGP_CAROLIEiJ_G0017029) #21	Hoxb3 (MGP_CAROLIEiJ_G0017030) #22	Hoxb2 (MGP_CAROLIEiJ_G0017031) #23	Hoxb1 (MGP_CAROLIEiJ_G0017032) #24	Skap1 (MGP_CAROLIEiJ_G0017033) #25	Snx11 (MGP_CAROLIEiJ_G0017034) #26	Cbx1 (MGP_CAROLIEiJ_G0017035) #27	MGP_CAROLIEiJ_G0017036	Nfe2l1 (MGP_CAROLIEiJ_G0017037) #28	Copz2 (MGP_CAROLIEiJ_G0017038) #29	Cdk5rap3 (MGP_CAROLIEiJ_G0017039) #30	Prr15l (MGP_CAROLIEiJ_G0017040) #31	Pnpo (MGP_CAROLIEiJ_G0017041) #32	Sp2 (MGP_CAROLIEiJ_G0017042) #33	Sp6 (MGP_CAROLIEiJ_G0017043) #34	MGP_CAROLIEiJ_G0017044 #35	Lrrc46 (MGP_CAROLIEiJ_G0017045) #36
Shrew mouse	MODERN SPECIES	5	B4galnt2 (MGP_PahariEiJ_G0018145)	MGP_PahariEiJ_G0018146	Gip (MGP_PahariEiJ_G0018147)	Snf8 (MGP_PahariEiJ_G0018148) #8	Ube2z (MGP_PahariEiJ_G0018149) #10	Atp5g1 (MGP_PahariEiJ_G0018150)	MGP_PahariEiJ_G0018151 #12	Ttll6 (MGP_PahariEiJ_G0018152) #13	Hoxb13 (MGP_PahariEiJ_G0018153) #14	Hoxb9 (MGP_PahariEiJ_G0018154) #16	Hoxb8 (MGP_PahariEiJ_G0018155) #17	Hoxb7 (MGP_PahariEiJ_G0018156) #18	Hoxb6 (MGP_PahariEiJ_G0018157) #19	Hoxb5 (MGP_PahariEiJ_G0018158) #20	Hoxb4 (MGP_PahariEiJ_G0018159) #21	Hoxb3 (MGP_PahariEiJ_G0018160) #22	Hoxb2 (MGP_PahariEiJ_G0018161) #23	Hoxb1 (MGP_PahariEiJ_G0018162) #24	Skap1 (MGP_PahariEiJ_G0018163) #25	Snx11 (MGP_PahariEiJ_G0018164) #26	Cbx1 (MGP_PahariEiJ_G0018165) #27	MGP_PahariEiJ_G0018166	Nfe2l1 (MGP_PahariEiJ_G0018167) #28	Copz2 (MGP_PahariEiJ_G0018168) #29	Cdk5rap3 (MGP_PahariEiJ_G0018169) #30	Prr15l (MGP_PahariEiJ_G0018170) #31	Pnpo (MGP_PahariEiJ_G0018171) #32	Sp2 (MGP_PahariEiJ_G0018172) #33	Sp6 (MGP_PahariEiJ_G0018173) #34	Scrn2 (MGP_PahariEiJ_G0018174) #35	Lrrc46 (MGP_PahariEiJ_G0018175) #36
Rat	MODERN SPECIES	1	Abi3 (ENSRNOG00000005575)	B4galnt2 (ENSRNOG00000067203)	Igf2bp1 (ENSRNOG00000006122)	Gip (ENSRNOG00000006306)	Snf8 (ENSRNOG00000006500) #8	Ube2z (ENSRNOG00000006868) #10	ENSRNOG00000066153 #12	Ttll6 (ENSRNOG00000004939) #13	Hoxb13 (ENSRNOG00000007491) #14	Hoxb9 (ENSRNOG00000007573) #16	Hoxb8 (ENSRNOG00000007585) #17	Hoxb7 (ENSRNOG00000007611) #18	Hoxb6 (ENSRNOG00000007823) #19	Hoxb5 (ENSRNOG00000008010) #20	Hoxb4 (ENSRNOG00000008191) #21	Hoxb3 (ENSRNOG00000008313) #22	Hoxb2 (ENSRNOG00000008365) #23	Hoxb1 (ENSRNOG00000008506) #24	Skap1 (ENSRNOG00000023881) #25	Snx11 (ENSRNOG00000008642) #26	Cbx1 (ENSRNOG00000008689) #27	Nfe2l1 (ENSRNOG00000008830) #28	Copz2 (ENSRNOG00000009225) #29	Cdk5rap3 (ENSRNOG00000048747) #30	Prr15l (ENSRNOG00000049162) #31	Pnpo (ENSRNOG00000046493) #32	Sp2 (ENSRNOG00000010492) #33	Sp6 (ENSRNOG00000023551) #34	Scrn2 (ENSRNOG00000010214) #35	Lrrc46 (ENSRNOG00000009902) #36	Mrpl10 (ENSRNOG00000009567) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1028	B4galnt2 (ENSNGAG00000016426)	Igf2bp1 (ENSNGAG00000015679)	Gip (ENSNGAG00000020354)	Snf8 (ENSNGAG00000001366) #8	Ube2z (ENSNGAG00000024296) #10	ENSNGAG00000024212	ENSNGAG00000023585 #12	Ttll6 (ENSNGAG00000011763) #13	Hoxb13 (ENSNGAG00000011053) #14	Hoxb9 (ENSNGAG00000010851) #16	Hoxb8 (ENSNGAG00000010647) #17	Hoxb7 (ENSNGAG00000010205) #18	Hoxb6 (ENSNGAG00000000973) #19	Hoxb5 (ENSNGAG00000023238) #20	Hoxb4 (ENSNGAG00000021768) #21	Hoxb3 (ENSNGAG00000020227) #22	Hoxb2 (ENSNGAG00000019089) #23	Hoxb1 (ENSNGAG00000018593) #24	Skap1 (ENSNGAG00000012571) #25	Snx11 (ENSNGAG00000010446) #26	Cbx1 (ENSNGAG00000006760) #27	Nfe2l1 (ENSNGAG00000000736) #28	Copz2 (ENSNGAG00000023713) #29	ENSNGAG00000000747 #30	ENSNGAG00000022529	Prr15l (ENSNGAG00000021432) #31	Pnpo (ENSNGAG00000020016) #32	Sp2 (ENSNGAG00000017612) #33	Sp6 (ENSNGAG00000015868) #34	Scrn2 (ENSNGAG00000023806) #35	Lrrc46 (ENSNGAG00000022557) #36
Lesser Egyptian jerboa	MODERN SPECIES	56	ENSJJAG00000002566	B4galnt2 (ENSJJAG00000006322)	Igf2bp1 (ENSJJAG00000002687)	Gip (ENSJJAG00000010688)	Snf8 (ENSJJAG00000006012) #8	ENSJJAG00000003530 #10	ENSJJAG00000010301	Ttll6 (ENSJJAG00000010253) #13	Hoxb13 (ENSJJAG00000010401) #14	Hoxb9 (ENSJJAG00000009821) #16	Hoxb8 (ENSJJAG00000002398) #17	Hoxb7 (ENSJJAG00000001284) #18	Hoxb6 (ENSJJAG00000000997) #19	Hoxb5 (ENSJJAG00000000763) #20	Hoxb4 (ENSJJAG00000002642) #21	Hoxb3 (ENSJJAG00000007804) #22	Hoxb2 (ENSJJAG00000009465) #23	Hoxb1 (ENSJJAG00000001073) #24	Skap1 (ENSJJAG00000003458) #25	ENSJJAG00000005754 #26	ENSJJAG00000007753 #27	Nfe2l1 (ENSJJAG00000006432) #28	Copz2 (ENSJJAG00000001025) #29	ENSJJAG00000002511 #30	Prr15l (ENSJJAG00000006478) #31	Pnpo (ENSJJAG00000023608) #32	Sp2 (ENSJJAG00000003061) #33	Sp6 (ENSJJAG00000006452) #34	Scrn2 (ENSJJAG00000023635) #35	Lrrc46 (ENSJJAG00000010412) #36	Mrpl10 (ENSJJAG00000004046) #37
Kangaroo rat	MODERN SPECIES	326	Abi3 (ENSDORG00000002245)	Gngt2 (ENSDORG00000023588)	Igf2bp1 (ENSDORG00000014371)	Snf8 (ENSDORG00000009262) #8	Ube2z (ENSDORG00000009258) #10	ENSDORG00000008511 #11	ENSDORG00000028385	ENSDORG00000024585 #12	Hoxb13 (ENSDORG00000008369) #14	Hoxb9 (ENSDORG00000027423) #16	Hoxb8 (ENSDORG00000007906) #17	Hoxb7 (ENSDORG00000007905) #18	Hoxb6 (ENSDORG00000023877) #19	Hoxb5 (ENSDORG00000007900) #20	Hoxb4 (ENSDORG00000007899) #21	Hoxb3 (ENSDORG00000007898) #22	Hoxb2 (ENSDORG00000007897) #23	Hoxb1 (ENSDORG00000007896) #24	Snx11 (ENSDORG00000029078) #26	Cbx1 (ENSDORG00000026399) #27	Nfe2l1 (ENSDORG00000000715) #28	Copz2 (ENSDORG00000013441) #29	Prr15l (ENSDORG00000027427) #31	Pnpo (ENSDORG00000014110) #32	Sp2 (ENSDORG00000014109) #33	Sp6 (ENSDORG00000026201) #34	Scrn2 (ENSDORG00000002361) #35	Osbpl7 (ENSDORG00000002354)	Tbx21 (ENSDORG00000013302)	Npepps (ENSDORG00000009627)	Socs7 (ENSDORG00000028979)
Lagomorpha	ANCESTRAL SPECIES		ENSGT00940000161380	ENSGT01100000263525.b.a	ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843 #8	ENSGT00940000159091 #10	ENSGT00940000154298.a.b #11	ENSGT00950000183025.a #12	ENSGT00940000161434 #13	ENSGT00940000159029 #14	ENSGT00940000161386 #16	ENSGT00940000161529 #17	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #35	ENSGT00940000161315 #36	ENSGT00390000000603 #37
Rabbit	MODERN SPECIES	10	GNGT2 (ENSOCUG00000016331)	B4GALNT2 (ENSOCUG00000003531)	IGF2BP1 (ENSOCUG00000004411)	GIP (ENSOCUG00000004410)	SNF8 (ENSOCUG00000009156) #8	UBE2Z (ENSOCUG00000009159) #10	ATP5MC1 (ENSOCUG00000016225) #11	CALCOCO2 (ENSOCUG00000016209) #12	ENSOCUG00000038154	TTLL6 (ENSOCUG00000006289) #13	HOXB13 (ENSOCUG00000012816) #14	HOXB9 (ENSOCUG00000027316) #16	HOXB8 (ENSOCUG00000029186) #17	HOXB5 (ENSOCUG00000023093) #20	HOXB6 (ENSOCUG00000011560) #19	HOXB3 (ENSOCUG00000023337) #22	HOXB2 (ENSOCUG00000024951) #23	HOXB1 (ENSOCUG00000001720) #24	SKAP1 (ENSOCUG00000001717) #25	SNX11 (ENSOCUG00000002309) #26	CBX1 (ENSOCUG00000008021) #27	NFE2L1 (ENSOCUG00000022298) #28	COPZ2 (ENSOCUG00000001802) #29	CDK5RAP3 (ENSOCUG00000012325) #30	PRR15L (ENSOCUG00000017489) #31	PNPO (ENSOCUG00000017484) #32	SP2 (ENSOCUG00000027415) #33	SP6 (ENSOCUG00000023482) #34	SCRN2 (ENSOCUG00000009457) #35	LRRC46 (ENSOCUG00000009453) #36	MRPL10 (ENSOCUG00000009452) #37
Pika	MODERN SPECIES	3527													ENSOPRG00000000402	HOXB6 (ENSOPRG00000000399) #19	HOXB5 (ENSOPRG00000000394) #20	HOXB3 (ENSOPRG00000000392) #22	HOXB2 (ENSOPRG00000000389) #23