Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00390000007843 #11	ENSGT00940000159720	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00950000185410	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00950000185410	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Glires	ANCESTRAL SPECIES	3	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Long-tailed chinchilla	MODERN SPECIES	158	GNGT2 (ENSCLAG00000014970) #7	B4GALNT2 (ENSCLAG00000016224) #8	IGF2BP1 (ENSCLAG00000015853) #9	ENSCLAG00000014301 #10	SNF8 (ENSCLAG00000013387) #11	UBE2Z (ENSCLAG00000016068) #12	ATP5MC1 (ENSCLAG00000015723) #13	CALCOCO2 (ENSCLAG00000015881) #14	TTLL6 (ENSCLAG00000013529) #15	HOXB13 (ENSCLAG00000014855) #16	ENSCLAG00000015198 #17	HOXB7 (ENSCLAG00000014906) #18	HOXB6 (ENSCLAG00000015524) #19	HOXB5 (ENSCLAG00000014374) #20	HOXB4 (ENSCLAG00000014725) #21	HOXB3 (ENSCLAG00000015322) #22	HOXB2 (ENSCLAG00000015271) #23	HOXB1 (ENSCLAG00000013047) #24	SKAP1 (ENSCLAG00000015423) #25	SNX11 (ENSCLAG00000015837) #26	CBX1 (ENSCLAG00000013587) #27	NFE2L1 (ENSCLAG00000014836) #28	COPZ2 (ENSCLAG00000013544) #29	CDK5RAP3 (ENSCLAG00000012292) #30	PRR15L (ENSCLAG00000017903) #31	PNPO (ENSCLAG00000013871) #32	SP2 (ENSCLAG00000014115) #33	SP6 (ENSCLAG00000016276) #34	LRRC46 (ENSCLAG00000016713) #35	SCRN2 (ENSCLAG00000013965) #36	MRPL10 (ENSCLAG00000015400) #37
Degu	MODERN SPECIES	97	GNGT2 (ENSODEG00000017526) #7	B4GALNT2 (ENSODEG00000018456) #8	ENSODEG00000016991 #9	ENSODEG00000017109	GIP (ENSODEG00000017003) #10	ENSODEG00000017032 #11	UBE2Z (ENSODEG00000017306) #12	ATP5MC1 (ENSODEG00000017366) #13	TTLL6 (ENSODEG00000017145) #15	HOXB13 (ENSODEG00000017199) #16	HOXB9 (ENSODEG00000017293) #17	HOXB8 (ENSODEG00000017119)	HOXB6 (ENSODEG00000016988) #19	HOXB5 (ENSODEG00000017253) #20	HOXB4 (ENSODEG00000017038) #21	HOXB3 (ENSODEG00000017116) #22	HOXB2 (ENSODEG00000017153) #23	HOXB1 (ENSODEG00000017050) #24	SKAP1 (ENSODEG00000017533) #25	SNX11 (ENSODEG00000017458) #26	CBX1 (ENSODEG00000017272) #27	NFE2L1 (ENSODEG00000017348) #28	ENSODEG00000020421	COPZ2 (ENSODEG00000017565) #29	ENSODEG00000017229 #30	PNPO (ENSODEG00000017424) #32	SP2 (ENSODEG00000017126) #33	SP6 (ENSODEG00000017625) #34	SCRN2 (ENSODEG00000017395) #36	LRRC46 (ENSODEG00000017367) #35	MRPL10 (ENSODEG00000017536) #37
Guinea pig	MODERN SPECIES	53	ENSCPOG00000020987	GNGT2 (ENSCPOG00000030054) #7	B4GALNT2 (ENSCPOG00000006191) #8	IGF2BP1 (ENSCPOG00000020174) #9	GIP (ENSCPOG00000023966) #10	SNF8 (ENSCPOG00000020610) #11	UBE2Z (ENSCPOG00000024416) #12	ENSCPOG00000009017 #13	CALCOCO2 (ENSCPOG00000021273) #14	TTLL6 (ENSCPOG00000012509) #15	HOXB13 (ENSCPOG00000013509) #16	HOXB9 (ENSCPOG00000037597) #17	HOXB6 (ENSCPOG00000040707) #19	HOXB5 (ENSCPOG00000030746) #20	ENSCPOG00000010105	ENSCPOG00000010107 #22	HOXB2 (ENSCPOG00000035468) #23	HOXB1 (ENSCPOG00000022183) #24	SKAP1 (ENSCPOG00000022118) #25	SNX11 (ENSCPOG00000020234) #26	CBX1 (ENSCPOG00000034435) #27	NFE2L1 (ENSCPOG00000030805) #28	COPZ2 (ENSCPOG00000019500) #29	CDK5RAP3 (ENSCPOG00000007275) #30	PRR15L (ENSCPOG00000035567) #31	PNPO (ENSCPOG00000003187) #32	SP2 (ENSCPOG00000014943) #33	SP6 (ENSCPOG00000007638) #34	SCRN2 (ENSCPOG00000006929) #36	LRRC46 (ENSCPOG00000006925) #35	MRPL10 (ENSCPOG00000037104) #37
Naked mole-rat female	MODERN SPECIES	12	IGF2BP1 (ENSHGLG00000010492) #9	ENSHGLG00000010703 #10	SNF8 (ENSHGLG00000011519) #11	UBE2Z (ENSHGLG00000016280) #12	ATP5MC1 (ENSHGLG00000035460) #13	CALCOCO2 (ENSHGLG00000012114) #14	TTLL6 (ENSHGLG00000019187) #15	HOXB13 (ENSHGLG00000014634) #16	ENSHGLG00000048296	HOXB9 (ENSHGLG00000014731) #17	HOXB8 (ENSHGLG00000038380)	HOXB7 (ENSHGLG00000045318) #18	HOXB6 (ENSHGLG00000012400) #19	HOXB5 (ENSHGLG00000039265) #20	HOXB4 (ENSHGLG00000034075) #21	HOXB3 (ENSHGLG00000010686) #22	HOXB2 (ENSHGLG00000010090) #23	HOXB1 (ENSHGLG00000009781) #24	SKAP1 (ENSHGLG00000014563) #25	SNX11 (ENSHGLG00000016837) #26	CBX1 (ENSHGLG00000013574) #27	NFE2L1 (ENSHGLG00000012592) #28	COPZ2 (ENSHGLG00000018543) #29	CDK5RAP3 (ENSHGLG00000019464) #30	PRR15L (ENSHGLG00000014696) #31	PNPO (ENSHGLG00000013159) #32	SP2 (ENSHGLG00000009902) #33	SP6 (ENSHGLG00000021113) #34	SCRN2 (ENSHGLG00000041375) #36	LRRC46 (ENSHGLG00000035931) #35	MRPL10 (ENSHGLG00000048399) #37
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Marmotini	ANCESTRAL SPECIES	8	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Squirrel	MODERN SPECIES	90	IGF2BP1 (ENSSTOG00000010643) #9	GIP (ENSSTOG00000004043) #10	SNF8 (ENSSTOG00000004023) #11	UBE2Z (ENSSTOG00000000796) #12	ATP5MC1 (ENSSTOG00000013404) #13	ENSSTOG00000013395 #14	TTLL6 (ENSSTOG00000006016) #15	ENSSTOG00000025444	HOXB13 (ENSSTOG00000014942) #16	HOXB9 (ENSSTOG00000009741) #17	HOXB8 (ENSSTOG00000028337)	HOXB7 (ENSSTOG00000025657) #18	HOXB6 (ENSSTOG00000020303) #19	HOXB5 (ENSSTOG00000009740) #20	HOXB4 (ENSSTOG00000009734) #21	HOXB3 (ENSSTOG00000025093) #22	HOXB2 (ENSSTOG00000023586) #23	HOXB1 (ENSSTOG00000028630) #24	SKAP1 (ENSSTOG00000013692) #25	SNX11 (ENSSTOG00000013684) #26	CBX1 (ENSSTOG00000023986) #27	NFE2L1 (ENSSTOG00000013664) #28	ENSSTOG00000027550 #29	CDK5RAP3 (ENSSTOG00000006244) #30	PRR15L (ENSSTOG00000006235) #31	PNPO (ENSSTOG00000006221) #32	SP2 (ENSSTOG00000015926) #33	SP6 (ENSSTOG00000001607) #34	SCRN2 (ENSSTOG00000027108) #36	LRRC46 (ENSSTOG00000002068) #35	MRPL10 (ENSSTOG00000024617) #37
Arctic ground squirrel	MODERN SPECIES	46	B4GALNT2 (ENSUPAG00010006086) #8	IGF2BP1 (ENSUPAG00010006100) #9	GIP (ENSUPAG00010006136) #10	SNF8 (ENSUPAG00010006148) #11	UBE2Z (ENSUPAG00010006178) #12	ENSUPAG00010006195	CALCOCO2 (ENSUPAG00010006243) #14	TTLL6 (ENSUPAG00010006267) #15	HOXB13 (ENSUPAG00010006301) #16	HOXB9 (ENSUPAG00010006305) #17	HOXB8 (ENSUPAG00010006310)	HOXB7 (ENSUPAG00010006312) #18	HOXB6 (ENSUPAG00010006317) #19	HOXB5 (ENSUPAG00010006320) #20	HOXB4 (ENSUPAG00010006325) #21	HOXB3 (ENSUPAG00010006328) #22	HOXB2 (ENSUPAG00010006336) #23	HOXB1 (ENSUPAG00010006340) #24	SKAP1 (ENSUPAG00010006345) #25	SNX11 (ENSUPAG00010006370) #26	CBX1 (ENSUPAG00010006381) #27	NFE2L1 (ENSUPAG00010006396) #28	COPZ2 (ENSUPAG00010006455) #29	CDK5RAP3 (ENSUPAG00010006466) #30	PRR15L (ENSUPAG00010006473) #31	PNPO (ENSUPAG00010006483) #32	SP2 (ENSUPAG00010006507) #33	SP6 (ENSUPAG00010006522) #34	SCRN2 (ENSUPAG00010006526) #36	LRRC46 (ENSUPAG00010006533) #35	MRPL10 (ENSUPAG00010006539) #37
Alpin marmot	MODERN SPECIES	42	ABI3 (ENSMMMG00000000452)	GNGT2 (ENSMMMG00000000525) #7	B4GALNT2 (ENSMMMG00000000569) #8	IGF2BP1 (ENSMMMG00000000613) #9	GIP (ENSMMMG00000000652) #10	SNF8 (ENSMMMG00000000680) #11	UBE2Z (ENSMMMG00000000717) #12	ATP5MC1 (ENSMMMG00000000731) #13	ENSMMMG00000000759 #14	TTLL6 (ENSMMMG00000001013) #15	HOXB13 (ENSMMMG00000001064) #16	HOXB7 (ENSMMMG00000001087) #18	HOXB6 (ENSMMMG00000001098) #19	HOXB5 (ENSMMMG00000001112) #20	HOXB4 (ENSMMMG00000001129) #21	HOXB3 (ENSMMMG00000001139) #22	HOXB1 (ENSMMMG00000001151) #24	SKAP1 (ENSMMMG00000001168) #25	SNX11 (ENSMMMG00000001243) #26	CBX1 (ENSMMMG00000001254) #27	NFE2L1 (ENSMMMG00000001284) #28	COPZ2 (ENSMMMG00000001352) #29	CDK5RAP3 (ENSMMMG00000001404) #30	GOSR2 (ENSMMMG00000001471)	RPRML (ENSMMMG00000001486)	LYZL6 (ENSMMMG00000001501)	ENSMMMG00000001520	ENSMMMG00000001551	ENSMMMG00000001756	ENSMMMG00000001792	MAP3K14 (ENSMMMG00000002213)
Eurasian red squirrel	MODERN SPECIES	12	IGF2BP1 (ENSSVLG00005020596) #9	GIP (ENSSVLG00005020522) #10	SNF8 (ENSSVLG00005020472) #11	ENSSVLG00005020450	UBE2Z (ENSSVLG00005020428) #12	ATP5MC1 (ENSSVLG00005020344) #13	CALCOCO2 (ENSSVLG00005020296) #14	TTLL6 (ENSSVLG00005020005) #15	HOXB13 (ENSSVLG00005019820) #16	HOXB9 (ENSSVLG00005019725) #17	HOXB8 (ENSSVLG00005019675)	HOXB7 (ENSSVLG00005019618) #18	HOXB6 (ENSSVLG00005019586) #19	HOXB5 (ENSSVLG00005019546) #20	HOXB4 (ENSSVLG00005019455) #21	HOXB3 (ENSSVLG00005019421) #22	HOXB2 (ENSSVLG00005019378) #23	HOXB1 (ENSSVLG00005019304) #24	SKAP1 (ENSSVLG00005019232) #25	SNX11 (ENSSVLG00005019122) #26	CBX1 (ENSSVLG00005019034) #27	NFE2L1 (ENSSVLG00005018798) #28	COPZ2 (ENSSVLG00005018641) #29	CDK5RAP3 (ENSSVLG00005018459) #30	PRR15L (ENSSVLG00005018399) #31	PNPO (ENSSVLG00005018295) #32	ENSSVLG00005018218 #33	SP6 (ENSSVLG00005018194) #34	SCRN2 (ENSSVLG00005018077) #36	LRRC46 (ENSSVLG00005018036) #35	MRPL10 (ENSSVLG00005017985) #37
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Myomorpha	ANCESTRAL SPECIES		ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Muroidea	ANCESTRAL SPECIES		ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.`b.a.a	ENSGT00940000159720.ab	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.a.a ##27	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.`b.a.a	ENSGT00940000159720.`b.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.a.b ##27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Golden Hamster	MODERN SPECIES	674	Abi3 (ENSMAUG00000021085)	Gngt2 (ENSMAUG00000019144) #7	B4galnt2 (ENSMAUG00000007916) #8	Gip (ENSMAUG00000009238) #10	Snf8 (ENSMAUG00000001857) #11	Ube2z (ENSMAUG00000007792) #12	ENSMAUG00000021751	Ttll6 (ENSMAUG00000020973) #15	Hoxb13 (ENSMAUG00000008407) #16	Hoxb9 (ENSMAUG00000017720) #17	Hoxb8 (ENSMAUG00000012636)	Hoxb7 (ENSMAUG00000021297) #18	Hoxb6 (ENSMAUG00000021423) #19	Hoxb5 (ENSMAUG00000021419) #20	Hoxb4 (ENSMAUG00000009367) #21	Hoxb3 (ENSMAUG00000011251) #22	Hoxb2 (ENSMAUG00000021979) #23	Hoxb1 (ENSMAUG00000013237) #24	Skap1 (ENSMAUG00000022191) #25	Snx11 (ENSMAUG00000021528) #26	ENSMAUG00000003463 ##27	Nfe2l1 (ENSMAUG00000020456) #28	Copz2 (ENSMAUG00000010560) #29	Cdk5rap3 (ENSMAUG00000007991) #30	Pnpo (ENSMAUG00000021706) #32	Sp2 (ENSMAUG00000019269) #33	Sp6 (ENSMAUG00000009667) #34	Scrn2 (ENSMAUG00000010014) #36	Lrrc46 (ENSMAUG00000019416) #35	Mrpl10 (ENSMAUG00000000820) #37	Osbpl7 (ENSMAUG00000013876)
Chinese hamster chok1gshd	MODERN SPECIES	33	Lrrc46 (ENSCGRG00001019758) #35	Scrn2 (ENSCGRG00001022143) #36	Sp6 (ENSCGRG00001002797) #34	Sp2 (ENSCGRG00001010976) #33	Pnpo (ENSCGRG00001018189) #32	Prr15l (ENSCGRG00001008926) #31	Cdk5rap3 (ENSCGRG00001006966) #30	Copz2 (ENSCGRG00001014767) #29	Nfe2l1 (ENSCGRG00001015287) #28	Cbx1 (ENSCGRG00001014799) ##27	Snx11 (ENSCGRG00001022221) #26	ENSCGRG00001020759 #25	ENSCGRG00001023355 #25	Hoxb1 (ENSCGRG00001024619) #24	Hoxb2 (ENSCGRG00001017587) #23	Hoxb3 (ENSCGRG00001016667) #22	Hoxb4 (ENSCGRG00001022431) #21	Hoxb5 (ENSCGRG00001016167) #20	Hoxb6 (ENSCGRG00001015674) #19	Hoxb7 (ENSCGRG00001021590) #18	Hoxb8 (ENSCGRG00001020235)	Hoxb9 (ENSCGRG00001015314) #17	Hoxb13 (ENSCGRG00001015060) #16	Ttll6 (ENSCGRG00001018398) #15	ENSCGRG00001011435 #14	ENSCGRG00001010560	ENSCGRG00001022606	Ube2z (ENSCGRG00001019150) #12	Snf8 (ENSCGRG00001000737) #11	Gip (ENSCGRG00001021533) #10	ENSCGRG00001000282 #9
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.`b.a.a	ENSGT00940000159720.ab	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Prairie vole	MODERN SPECIES	114			ENSMOCG00000004266	ENSMOCG00000021226 #10	Snf8 (ENSMOCG00000016684) #11	Ube2z (ENSMOCG00000018241) #12	ENSMOCG00000013163	Ttll6 (ENSMOCG00000021089) #15	Hoxb13 (ENSMOCG00000021389) #16	Hoxb9 (ENSMOCG00000020312) #17	Hoxb8 (ENSMOCG00000018435)	Hoxb7 (ENSMOCG00000020820) #18	Hoxb6 (ENSMOCG00000020355) #19	Hoxb5 (ENSMOCG00000014523) #20	Hoxb4 (ENSMOCG00000022964) #21	Hoxb3 (ENSMOCG00000020739) #22	Hoxb2 (ENSMOCG00000014846) #23	Hoxb1 (ENSMOCG00000002452) #24	Skap1 (ENSMOCG00000018431) #25	Snx11 (ENSMOCG00000019303) #26	Cbx1 (ENSMOCG00000001520) #27	Nfe2l1 (ENSMOCG00000016002) #28	Copz2 (ENSMOCG00000022427) #29	Cdk5rap3 (ENSMOCG00000019534) #30	Prr15l (ENSMOCG00000006695) #31	Pnpo (ENSMOCG00000011655) #32	Sp2 (ENSMOCG00000020935) #33	Sp6 (ENSMOCG00000007065) #34	Scrn2 (ENSMOCG00000019511) #36	Lrrc46 (ENSMOCG00000016707) #35	Mrpl10 (ENSMOCG00000019451) #37
Northern American deer mouse	MODERN SPECIES	21	Abi3 (ENSPEMG00000014242)	Gngt2 (ENSPEMG00000027491) #7	B4galnt2 (ENSPEMG00000020717) #8	Igf2bp1 (ENSPEMG00000021974) #9	Gip (ENSPEMG00000021184) #10	Snf8 (ENSPEMG00000022229) #11	Ube2z (ENSPEMG00000020953) #12	Atp5g1 (ENSPEMG00000020590)	ENSPEMG00000028729 #14	ENSPEMG00000025676 #14	Ttll6 (ENSPEMG00000021918) #15	Hoxb13 (ENSPEMG00000021511) #16	Hoxb9 (ENSPEMG00000027158) #17	Hoxb5 (ENSPEMG00000030101) #20	Hoxb4 (ENSPEMG00000029805) #21	Hoxb3 (ENSPEMG00000028692) #22	Hoxb2 (ENSPEMG00000029510) #23	Hoxb1 (ENSPEMG00000023977) #24	Skap1 (ENSPEMG00000000585) #25	ENSPEMG00000020286	Snx11 (ENSPEMG00000000381) #26	Cbx1 (ENSPEMG00000020976) ##27	Nfe2l1 (ENSPEMG00000010512) #28	Copz2 (ENSPEMG00000011137) #29	Cdk5rap3 (ENSPEMG00000020712) #30	ENSPEMG00000030963	Prr15l (ENSPEMG00000024436) #31	Pnpo (ENSPEMG00000025094) #32	Sp2 (ENSPEMG00000017112) #33	Sp6 (ENSPEMG00000001231) #34	Scrn2 (ENSPEMG00000020381) #36
Murinae	ANCESTRAL SPECIES	6	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Mus	ANCESTRAL SPECIES	2	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Mus_A	ANCESTRAL SPECIES	2	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Mus_B	ANCESTRAL SPECIES	2	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Mus_C	ANCESTRAL SPECIES	3	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc.b #27	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Steppe mouse	MODERN SPECIES	3291	Igf2bp1 (ENSMSIG00000019193) #9	Gip (ENSMSIG00000019162) #10	Snf8 (ENSMSIG00000019072) #11	Ube2z (ENSMSIG00000019038) #12	Atp5g1 (ENSMSIG00000018986)	ENSMSIG00000018956 #14	Ttll6 (ENSMSIG00000018881) #15	Hoxb13 (ENSMSIG00000018865) #16	Hoxb9 (ENSMSIG00000018823) #17	Hoxb8 (ENSMSIG00000018807)	Hoxb7 (ENSMSIG00000018805) #18	Hoxb6 (ENSMSIG00000018795) #19	Hoxb5 (ENSMSIG00000018787) #20	Hoxb4 (ENSMSIG00000018777) #21	ENSMSIG00000018776	Hoxb3 (ENSMSIG00000018771) #22	Hoxb2 (ENSMSIG00000018769) #23	Hoxb1 (ENSMSIG00000018752) #24	Skap1 (ENSMSIG00000018601) #25	Snx11 (ENSMSIG00000018546) #26	ENSMSIG00000018520	Cbx1 (ENSMSIG00000018447) #27	Nfe2l1 (ENSMSIG00000018374) #28	Copz2 (ENSMSIG00000018337) #29	Cdk5rap3 (ENSMSIG00000018309) #30	ENSMSIG00000018270 #31	ENSMSIG00000018267 #32	Sp2 (ENSMSIG00000018237) #33	Sp6 (ENSMSIG00000018223) #34	Scrn2 (ENSMSIG00000018202) #36	Lrrc46 (ENSMSIG00000018171) #35
spretus	MODERN SPECIES	2	B4galnt2 (MGP_SPRETEiJ_G0017861) #8	Igf2bp1 (MGP_SPRETEiJ_G0017862) #9	Gip (MGP_SPRETEiJ_G0017863) #10	Snf8 (MGP_SPRETEiJ_G0017864) #11	Ube2z (MGP_SPRETEiJ_G0017865) #12	Atp5g1 (MGP_SPRETEiJ_G0017866)	MGP_SPRETEiJ_G0017867 #14	Ttll6 (MGP_SPRETEiJ_G0017868) #15	Hoxb13 (MGP_SPRETEiJ_G0017869) #16	Hoxb9 (MGP_SPRETEiJ_G0017870) #17	Hoxb8 (MGP_SPRETEiJ_G0017871)	Hoxb7 (MGP_SPRETEiJ_G0017872) #18	Hoxb6 (MGP_SPRETEiJ_G0017873) #19	Hoxb5 (MGP_SPRETEiJ_G0017874) #20	Hoxb4 (MGP_SPRETEiJ_G0017875) #21	Hoxb3 (MGP_SPRETEiJ_G0017876) #22	Hoxb2 (MGP_SPRETEiJ_G0017877) #23	Hoxb1 (MGP_SPRETEiJ_G0017878) #24	MGP_SPRETEiJ_G0017879 #25	Snx11 (MGP_SPRETEiJ_G0017880) #26	Cbx1 (MGP_SPRETEiJ_G0017881) #27	MGP_SPRETEiJ_G0017882	Nfe2l1 (MGP_SPRETEiJ_G0017883) #28	Copz2 (MGP_SPRETEiJ_G0017884) #29	Cdk5rap3 (MGP_SPRETEiJ_G0017885) #30	Prr15l (MGP_SPRETEiJ_G0017886) #31	Pnpo (MGP_SPRETEiJ_G0017887) #32	Sp2 (MGP_SPRETEiJ_G0017888) #33	Sp6 (MGP_SPRETEiJ_G0017889) #34	Scrn2 (MGP_SPRETEiJ_G0017890) #36	Lrrc46 (MGP_SPRETEiJ_G0017891) #35
Mouse	MODERN SPECIES	2	B4galnt2 (ENSMUSG00000013418) #8	Igf2bp1 (ENSMUSG00000013415) #9	Gip (ENSMUSG00000014351) #10	Snf8 (ENSMUSG00000006058) #11	Ube2z (ENSMUSG00000014349) #12	Atp5g1 (ENSMUSG00000006057)	Calcoco2 (ENSMUSG00000006056) #14	Ttll6 (ENSMUSG00000038756) #15	Hoxb13 (ENSMUSG00000049604) #16	Hoxb9 (ENSMUSG00000020875) #17	Hoxb8 (ENSMUSG00000056648)	Hoxb7 (ENSMUSG00000038721) #18	Hoxb6 (ENSMUSG00000000690) #19	Hoxb5 (ENSMUSG00000038700) #20	Hoxb4 (ENSMUSG00000038692) #21	Hoxb3 (ENSMUSG00000048763) #22	Hoxb2 (ENSMUSG00000075588) #23	Hoxb1 (ENSMUSG00000018973) #24	Skap1 (ENSMUSG00000057058) #25	Snx11 (ENSMUSG00000020876) #26	Cbx1 (ENSMUSG00000018666) #27	Nfe2l1 (ENSMUSG00000038615) #28	Copz2 (ENSMUSG00000018672) #29	Cdk5rap3 (ENSMUSG00000018669) #30	Prr15l (ENSMUSG00000047040) #31	Pnpo (ENSMUSG00000018659) #32	Sp2 (ENSMUSG00000018678) #33	Sp6 (ENSMUSG00000038560) #34	Scrn2 (ENSMUSG00000020877) #36	Lrrc46 (ENSMUSG00000020878) #35	Mrpl10 (ENSMUSG00000001445) #37
Ryukyu mouse	MODERN SPECIES	2	B4galnt2 (MGP_CAROLIEiJ_G0017015) #8	Igf2bp1 (MGP_CAROLIEiJ_G0017016) #9	Gip (MGP_CAROLIEiJ_G0017017) #10	Snf8 (MGP_CAROLIEiJ_G0017018) #11	MGP_CAROLIEiJ_G0017019 #12	MGP_CAROLIEiJ_G0017020	MGP_CAROLIEiJ_G0017021 #14	Ttll6 (MGP_CAROLIEiJ_G0017022) #15	Hoxb13 (MGP_CAROLIEiJ_G0017023) #16	Hoxb9 (MGP_CAROLIEiJ_G0017024) #17	Hoxb8 (MGP_CAROLIEiJ_G0017025)	Hoxb7 (MGP_CAROLIEiJ_G0017026) #18	Hoxb6 (MGP_CAROLIEiJ_G0017027) #19	Hoxb5 (MGP_CAROLIEiJ_G0017028) #20	Hoxb4 (MGP_CAROLIEiJ_G0017029) #21	Hoxb3 (MGP_CAROLIEiJ_G0017030) #22	Hoxb2 (MGP_CAROLIEiJ_G0017031) #23	Hoxb1 (MGP_CAROLIEiJ_G0017032) #24	Skap1 (MGP_CAROLIEiJ_G0017033) #25	Snx11 (MGP_CAROLIEiJ_G0017034) #26	Cbx1 (MGP_CAROLIEiJ_G0017035) #27	MGP_CAROLIEiJ_G0017036	Nfe2l1 (MGP_CAROLIEiJ_G0017037) #28	Copz2 (MGP_CAROLIEiJ_G0017038) #29	Cdk5rap3 (MGP_CAROLIEiJ_G0017039) #30	Prr15l (MGP_CAROLIEiJ_G0017040) #31	Pnpo (MGP_CAROLIEiJ_G0017041) #32	Sp2 (MGP_CAROLIEiJ_G0017042) #33	Sp6 (MGP_CAROLIEiJ_G0017043) #34	MGP_CAROLIEiJ_G0017044 #36	Lrrc46 (MGP_CAROLIEiJ_G0017045) #35
Shrew mouse	MODERN SPECIES	5	B4galnt2 (MGP_PahariEiJ_G0018145) #8	MGP_PahariEiJ_G0018146 #9	Gip (MGP_PahariEiJ_G0018147) #10	Snf8 (MGP_PahariEiJ_G0018148) #11	Ube2z (MGP_PahariEiJ_G0018149) #12	Atp5g1 (MGP_PahariEiJ_G0018150)	MGP_PahariEiJ_G0018151 #14	Ttll6 (MGP_PahariEiJ_G0018152) #15	Hoxb13 (MGP_PahariEiJ_G0018153) #16	Hoxb9 (MGP_PahariEiJ_G0018154) #17	Hoxb8 (MGP_PahariEiJ_G0018155)	Hoxb7 (MGP_PahariEiJ_G0018156) #18	Hoxb6 (MGP_PahariEiJ_G0018157) #19	Hoxb5 (MGP_PahariEiJ_G0018158) #20	Hoxb4 (MGP_PahariEiJ_G0018159) #21	Hoxb3 (MGP_PahariEiJ_G0018160) #22	Hoxb2 (MGP_PahariEiJ_G0018161) #23	Hoxb1 (MGP_PahariEiJ_G0018162) #24	Skap1 (MGP_PahariEiJ_G0018163) #25	Snx11 (MGP_PahariEiJ_G0018164) #26	Cbx1 (MGP_PahariEiJ_G0018165) #27	MGP_PahariEiJ_G0018166	Nfe2l1 (MGP_PahariEiJ_G0018167) #28	Copz2 (MGP_PahariEiJ_G0018168) #29	Cdk5rap3 (MGP_PahariEiJ_G0018169) #30	Prr15l (MGP_PahariEiJ_G0018170) #31	Pnpo (MGP_PahariEiJ_G0018171) #32	Sp2 (MGP_PahariEiJ_G0018172) #33	Sp6 (MGP_PahariEiJ_G0018173) #34	Scrn2 (MGP_PahariEiJ_G0018174) #36	Lrrc46 (MGP_PahariEiJ_G0018175) #35
Rat	MODERN SPECIES	1	Abi3 (ENSRNOG00000005575)	B4galnt2 (ENSRNOG00000067203) #8	Igf2bp1 (ENSRNOG00000006122) #9	Gip (ENSRNOG00000006306) #10	Snf8 (ENSRNOG00000006500) #11	Ube2z (ENSRNOG00000006868) #12	ENSRNOG00000066153 #14	Ttll6 (ENSRNOG00000004939) #15	Hoxb13 (ENSRNOG00000007491) #16	Hoxb9 (ENSRNOG00000007573) #17	Hoxb8 (ENSRNOG00000007585)	Hoxb7 (ENSRNOG00000007611) #18	Hoxb6 (ENSRNOG00000007823) #19	Hoxb5 (ENSRNOG00000008010) #20	Hoxb4 (ENSRNOG00000008191) #21	Hoxb3 (ENSRNOG00000008313) #22	Hoxb2 (ENSRNOG00000008365) #23	Hoxb1 (ENSRNOG00000008506) #24	Skap1 (ENSRNOG00000023881) #25	Snx11 (ENSRNOG00000008642) #26	Cbx1 (ENSRNOG00000008689) #27	Nfe2l1 (ENSRNOG00000008830) #28	Copz2 (ENSRNOG00000009225) #29	Cdk5rap3 (ENSRNOG00000048747) #30	Prr15l (ENSRNOG00000049162) #31	Pnpo (ENSRNOG00000046493) #32	Sp2 (ENSRNOG00000010492) #33	Sp6 (ENSRNOG00000023551) #34	Scrn2 (ENSRNOG00000010214) #36	Lrrc46 (ENSRNOG00000009902) #35	Mrpl10 (ENSRNOG00000009567) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1028	B4galnt2 (ENSNGAG00000016426) #8	Igf2bp1 (ENSNGAG00000015679) #9	Gip (ENSNGAG00000020354) #10	Snf8 (ENSNGAG00000001366) #11	Ube2z (ENSNGAG00000024296) #12	ENSNGAG00000024212	ENSNGAG00000023585 #14	Ttll6 (ENSNGAG00000011763) #15	Hoxb13 (ENSNGAG00000011053) #16	Hoxb9 (ENSNGAG00000010851) #17	Hoxb8 (ENSNGAG00000010647)	Hoxb7 (ENSNGAG00000010205) #18	Hoxb6 (ENSNGAG00000000973) #19	Hoxb5 (ENSNGAG00000023238) #20	Hoxb4 (ENSNGAG00000021768) #21	Hoxb3 (ENSNGAG00000020227) #22	Hoxb2 (ENSNGAG00000019089) #23	Hoxb1 (ENSNGAG00000018593) #24	Skap1 (ENSNGAG00000012571) #25	Snx11 (ENSNGAG00000010446) #26	Cbx1 (ENSNGAG00000006760) #27	Nfe2l1 (ENSNGAG00000000736) #28	Copz2 (ENSNGAG00000023713) #29	ENSNGAG00000000747 #30	ENSNGAG00000022529	Prr15l (ENSNGAG00000021432) #31	Pnpo (ENSNGAG00000020016) #32	Sp2 (ENSNGAG00000017612) #33	Sp6 (ENSNGAG00000015868) #34	Scrn2 (ENSNGAG00000023806) #36	Lrrc46 (ENSNGAG00000022557) #35
Lesser Egyptian jerboa	MODERN SPECIES	56	ENSJJAG00000002566	B4galnt2 (ENSJJAG00000006322) #8	Igf2bp1 (ENSJJAG00000002687) #9	Gip (ENSJJAG00000010688) #10	Snf8 (ENSJJAG00000006012) #11	ENSJJAG00000003530 #12	ENSJJAG00000010301	Ttll6 (ENSJJAG00000010253) #15	Hoxb13 (ENSJJAG00000010401) #16	Hoxb9 (ENSJJAG00000009821) #17	Hoxb8 (ENSJJAG00000002398)	Hoxb7 (ENSJJAG00000001284) #18	Hoxb6 (ENSJJAG00000000997) #19	Hoxb5 (ENSJJAG00000000763) #20	Hoxb4 (ENSJJAG00000002642) #21	Hoxb3 (ENSJJAG00000007804) #22	Hoxb2 (ENSJJAG00000009465) #23	Hoxb1 (ENSJJAG00000001073) #24	Skap1 (ENSJJAG00000003458) #25	ENSJJAG00000005754 #26	ENSJJAG00000007753 ##27	Nfe2l1 (ENSJJAG00000006432) #28	Copz2 (ENSJJAG00000001025) #29	ENSJJAG00000002511 #30	Prr15l (ENSJJAG00000006478) #31	Pnpo (ENSJJAG00000023608) #32	Sp2 (ENSJJAG00000003061) #33	Sp6 (ENSJJAG00000006452) #34	Scrn2 (ENSJJAG00000023635) #36	Lrrc46 (ENSJJAG00000010412) #35	Mrpl10 (ENSJJAG00000004046) #37
Kangaroo rat	MODERN SPECIES	326	Abi3 (ENSDORG00000002245)	Gngt2 (ENSDORG00000023588) #7	Igf2bp1 (ENSDORG00000014371) #9	Snf8 (ENSDORG00000009262) #11	Ube2z (ENSDORG00000009258) #12	ENSDORG00000008511 #13	ENSDORG00000028385	ENSDORG00000024585 #14	Hoxb13 (ENSDORG00000008369) #16	Hoxb9 (ENSDORG00000027423) #17	Hoxb8 (ENSDORG00000007906)	Hoxb7 (ENSDORG00000007905) #18	Hoxb6 (ENSDORG00000023877) #19	Hoxb5 (ENSDORG00000007900) #20	Hoxb4 (ENSDORG00000007899) #21	Hoxb3 (ENSDORG00000007898) #22	Hoxb2 (ENSDORG00000007897) #23	Hoxb1 (ENSDORG00000007896) #24	Snx11 (ENSDORG00000029078) #26	Cbx1 (ENSDORG00000026399) #27	Nfe2l1 (ENSDORG00000000715) #28	Copz2 (ENSDORG00000013441) #29	Prr15l (ENSDORG00000027427) #31	Pnpo (ENSDORG00000014110) #32	Sp2 (ENSDORG00000014109) #33	Sp6 (ENSDORG00000026201) #34	Scrn2 (ENSDORG00000002361) #36	Osbpl7 (ENSDORG00000002354)	Tbx21 (ENSDORG00000013302)	Npepps (ENSDORG00000009627)	Socs7 (ENSDORG00000028979)
Lagomorpha	ANCESTRAL SPECIES		ENSGT00940000161380	ENSGT01100000263525.b.a #7	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.dc #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Rabbit	MODERN SPECIES	10	GNGT2 (ENSOCUG00000016331) #7	B4GALNT2 (ENSOCUG00000003531) #8	IGF2BP1 (ENSOCUG00000004411) #9	GIP (ENSOCUG00000004410) #10	SNF8 (ENSOCUG00000009156) #11	UBE2Z (ENSOCUG00000009159) #12	ATP5MC1 (ENSOCUG00000016225) #13	CALCOCO2 (ENSOCUG00000016209) #14	ENSOCUG00000038154	TTLL6 (ENSOCUG00000006289) #15	HOXB13 (ENSOCUG00000012816) #16	HOXB9 (ENSOCUG00000027316) #17	HOXB8 (ENSOCUG00000029186)	HOXB5 (ENSOCUG00000023093) #20	HOXB6 (ENSOCUG00000011560) #19	HOXB3 (ENSOCUG00000023337) #22	HOXB2 (ENSOCUG00000024951) #23	HOXB1 (ENSOCUG00000001720) #24	SKAP1 (ENSOCUG00000001717) #25	SNX11 (ENSOCUG00000002309) #26	CBX1 (ENSOCUG00000008021) #27	NFE2L1 (ENSOCUG00000022298) #28	COPZ2 (ENSOCUG00000001802) #29	CDK5RAP3 (ENSOCUG00000012325) #30	PRR15L (ENSOCUG00000017489) #31	PNPO (ENSOCUG00000017484) #32	SP2 (ENSOCUG00000027415) #33	SP6 (ENSOCUG00000023482) #34	SCRN2 (ENSOCUG00000009457) #36	LRRC46 (ENSOCUG00000009453) #35	MRPL10 (ENSOCUG00000009452) #37
Pika	MODERN SPECIES	3527													ENSOPRG00000000402	HOXB6 (ENSOPRG00000000399) #19	HOXB5 (ENSOPRG00000000394) #20	HOXB3 (ENSOPRG00000000392) #22	HOXB2 (ENSOPRG00000000389) #23
Tree shrew	MODERN SPECIES	851																HOXB3 (ENSTBEG00000015809) #22
Primates	ANCESTRAL SPECIES	3	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00950000185410	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00950000185410	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590.h #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00950000185410	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590.h #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Lemuriformes_a	ANCESTRAL SPECIES		ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00950000185410	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590.h #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Coquerels sifaka	MODERN SPECIES	120	ENSPCOG00000018672	IGF2BP1 (ENSPCOG00000006475) #9	GIP (ENSPCOG00000024832) #10	SNF8 (ENSPCOG00000026895) #11	UBE2Z (ENSPCOG00000014816) #12	ENSPCOG00000008741	CALCOCO2 (ENSPCOG00000021998) #14	TTLL6 (ENSPCOG00000021391) #15	HOXB13 (ENSPCOG00000018182) #16	HOXB9 (ENSPCOG00000027130) #17	HOXB8 (ENSPCOG00000024853)	HOXB7 (ENSPCOG00000028248) #18	HOXB6 (ENSPCOG00000019931) #19	HOXB5 (ENSPCOG00000015692) #20	HOXB4 (ENSPCOG00000022963) #21	HOXB3 (ENSPCOG00000020113) #22	HOXB2 (ENSPCOG00000017380) #23	HOXB1 (ENSPCOG00000025930) #24	SKAP1 (ENSPCOG00000022221) #25	SNX11 (ENSPCOG00000011015) #26	ENSPCOG00000010902 #27	NFE2L1 (ENSPCOG00000021740) #28	COPZ2 (ENSPCOG00000018359) #29	CDK5RAP3 (ENSPCOG00000016598) #30	PNPO (ENSPCOG00000017906) #32	SP2 (ENSPCOG00000017198) #33	SP6 (ENSPCOG00000008529) #34	SCRN2 (ENSPCOG00000014438) #36	LRRC46 (ENSPCOG00000015829) #35	MRPL10 (ENSPCOG00000025492) #37	OSBPL7 (ENSPCOG00000019714)
Greater bamboo lemur	MODERN SPECIES	168		IGF2BP1 (ENSPSMG00000020445) #9	GIP (ENSPSMG00000020432) #10	SNF8 (ENSPSMG00000020426) #11	UBE2Z (ENSPSMG00000020387) #12	ENSPSMG00000020369	CALCOCO2 (ENSPSMG00000020308) #14	ENSPSMG00000020243 #15	HOXB13 (ENSPSMG00000020237) #16	HOXB9 (ENSPSMG00000020232) #17	HOXB8 (ENSPSMG00000020227)	HOXB7 (ENSPSMG00000020218) #18	HOXB6 (ENSPSMG00000020209) #19	HOXB5 (ENSPSMG00000020200) #20	HOXB4 (ENSPSMG00000020187) #21	HOXB3 (ENSPSMG00000020182) #22	HOXB2 (ENSPSMG00000020176) #23	HOXB1 (ENSPSMG00000020167) #24	SKAP1 (ENSPSMG00000020161) #25	SNX11 (ENSPSMG00000020139) #26	CBX1 (ENSPSMG00000020119) #27
Mouse lemur	MODERN SPECIES	7	ENSMICG00000037104	ENSMICG00000013324 #9	GIP (ENSMICG00000013317) #10	SNF8 (ENSMICG00000013305) #11	UBE2Z (ENSMICG00000046102) #12	ENSMICG00000003414	CALCOCO2 (ENSMICG00000015330) #14	TTLL6 (ENSMICG00000007549) #15	HOXB13 (ENSMICG00000007546) #16	HOXB9 (ENSMICG00000038413) #17	HOXB8 (ENSMICG00000045961)	HOXB7 (ENSMICG00000007539) #18	HOXB6 (ENSMICG00000042216) #19	HOXB5 (ENSMICG00000047139) #20	HOXB4 (ENSMICG00000043173) #21	HOXB3 (ENSMICG00000007522) #22	HOXB2 (ENSMICG00000038222) #23	HOXB1 (ENSMICG00000048152) #24	SKAP1 (ENSMICG00000047158) #25	ENSMICG00000029923	SNX11 (ENSMICG00000014741) #26	NFE2L1 (ENSMICG00000014716) #28	ENSMICG00000009510 #27	COPZ2 (ENSMICG00000014097) #29	CDK5RAP3 (ENSMICG00000014077) #30	ENSMICG00000014065 #32	SP2 (ENSMICG00000036051) #33	SP6 (ENSMICG00000047695) #34	SCRN2 (ENSMICG00000004823) #36	LRRC46 (ENSMICG00000004816) #35	MRPL10 (ENSMICG00000048091) #37
Bushbaby	MODERN SPECIES	133	IGF2BP1 (ENSOGAG00000001270) #9	GIP (ENSOGAG00000010130) #10	ENSOGAG00000001269 #11	UBE2Z (ENSOGAG00000001267) #12	ATP5MC1 (ENSOGAG00000011713) #13	CALCOCO2 (ENSOGAG00000011709) #14	TTLL6 (ENSOGAG00000011701) #15	HOXB13 (ENSOGAG00000032643) #16	ENSOGAG00000034464	HOXB9 (ENSOGAG00000008668) #17	HOXB8 (ENSOGAG00000029480)	HOXB7 (ENSOGAG00000008667) #18	HOXB6 (ENSOGAG00000008661) #19	HOXB5 (ENSOGAG00000032432) #20	HOXB4 (ENSOGAG00000033709) #21	HOXB3 (ENSOGAG00000032090) #22	HOXB2 (ENSOGAG00000029280) #23	HOXB1 (ENSOGAG00000031645) #24	SKAP1 (ENSOGAG00000015855) #25	SNX11 (ENSOGAG00000015854) #26	CBX1 (ENSOGAG00000005658) #27	NFE2L1 (ENSOGAG00000025191) #28	COPZ2 (ENSOGAG00000004954) #29	CDK5RAP3 (ENSOGAG00000004951) #30	PRR15L (ENSOGAG00000006187) #31	PNPO (ENSOGAG00000006186) #32	SP2 (ENSOGAG00000030380) #33	SP6 (ENSOGAG00000030282) #34	SCRN2 (ENSOGAG00000006181) #36	LRRC46 (ENSOGAG00000006177) #35	MRPL10 (ENSOGAG00000006173) #37
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Tarsier	MODERN SPECIES	4193											HOXB7 (ENSTSYG00000028173) #18	HOXB6 (ENSTSYG00000031001) #19	HOXB5 (ENSTSYG00000032912) #20	HOXB4 (ENSTSYG00000026874) #21	ENSTSYG00000029322	HOXB3 (ENSTSYG00000035231) #22	HOXB2 (ENSTSYG00000004903) #23	HOXB1 (ENSTSYG00000004656) #24
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00390000007843.u.a #11	ENSGT01100000264599	ENSGT00390000007843.v #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Catarrhini	ANCESTRAL SPECIES	8	ENSGT01100000264599	ENSGT00390000007843.v #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603.b #37
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00390000007843.u.a #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713.h.b #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603.b #37
Hominidae	ANCESTRAL SPECIES	16	ENSGT00390000007843.u.a #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713.h.a #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603.b #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00390000007843.u.a #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713.h.a.a.b #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603.b #37
Gorilla	MODERN SPECIES	18	SNF8 (ENSGGOG00000025290) #11	ENSGGOG00000041818 #12	ENSGGOG00000041027	ATP5MC1 (ENSGGOG00000001626) #13	ENSGGOG00000040493	CALCOCO2 (ENSGGOG00000005537) #14	TTLL6 (ENSGGOG00000001947) #15	HOXB13 (ENSGGOG00000001945) #16	ENSGGOG00000042122	PRAC1 (ENSGGOG00000027105)	ENSGGOG00000036688 #17	HOXB8 (ENSGGOG00000039810)	HOXB7 (ENSGGOG00000002637) #18	HOXB6 (ENSGGOG00000002634) #19	HOXB5 (ENSGGOG00000023582) #20	HOXB3 (ENSGGOG00000012838) #22	HOXB2 (ENSGGOG00000009910) #23	HOXB1 (ENSGGOG00000009904) #24	SKAP1 (ENSGGOG00000012624) #25	ENSGGOG00000025896	CBX1 (ENSGGOG00000024063) #27	NFE2L1 (ENSGGOG00000002268) #28	COPZ2 (ENSGGOG00000002264) #29	ENSGGOG00000022994 #30	PRR15L (ENSGGOG00000037816) #31	PNPO (ENSGGOG00000003786) #32	SP2 (ENSGGOG00000005330) #33	SP6 (ENSGGOG00000036261) #34	SCRN2 (ENSGGOG00000004547) #36	LRRC46 (ENSGGOG00000012667) #35	MRPL10 (ENSGGOG00000015353) #37
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00390000007843.u.a #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713.h.a.a.b #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603.b #37
Human	MODERN SPECIES	8	GIP (ENSG00000159224) #10	SNF8 (ENSG00000159210) #11	UBE2Z (ENSG00000159202) #12	ATP5MC1 (ENSG00000159199) #13	CALCOCO2 (ENSG00000136436) #14	TTLL6 (ENSG00000170703) #15	HOXB13 (ENSG00000159184) #16	PRAC2 (ENSG00000229637)	PRAC1 (ENSG00000159182)	HOXB9 (ENSG00000170689) #17	HOXB8 (ENSG00000120068)	HOXB7 (ENSG00000260027) #18	HOXB6 (ENSG00000108511) #19	HOXB5 (ENSG00000120075) #20	HOXB4 (ENSG00000182742) #21	HOXB3 (ENSG00000120093) #22	HOXB2 (ENSG00000173917) #23	HOXB1 (ENSG00000120094) #24	SKAP1 (ENSG00000141293) #25	SNX11 (ENSG00000002919) #26	CBX1 (ENSG00000108468) #27	NFE2L1 (ENSG00000082641) #28	COPZ2 (ENSG00000005243) #29	CDK5RAP3 (ENSG00000108465) #30	PRR15L (ENSG00000167183) #31	PNPO (ENSG00000108439) #32	SP2 (ENSG00000167182) #33	SP6 (ENSG00000189120) #34	SCRN2 (ENSG00000141295) #36	LRRC46 (ENSG00000141294) #35	MRPL10 (ENSG00000159111) #37
Pan	ANCESTRAL SPECIES	3	ENSGT00390000007843.u.a #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713.h.a.a.b #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603.b #37
Chimpanzee	MODERN SPECIES	8	SNF8 (ENSPTRG00000051067) #11	UBE2Z (ENSPTRG00000009365) #12	ENSPTRG00000051053	ATP5MC1 (ENSPTRG00000009364) #13	CALCOCO2 (ENSPTRG00000009363) #14	TTLL6 (ENSPTRG00000009361) #15	HOXB13 (ENSPTRG00000009360) #16	PRAC2 (ENSPTRG00000048455)	PRAC1 (ENSPTRG00000009359)	HOXB9 (ENSPTRG00000009358) #17	HOXB8 (ENSPTRG00000048497)	HOXB7 (ENSPTRG00000009357) #18	HOXB6 (ENSPTRG00000009356) #19	HOXB5 (ENSPTRG00000009355) #20	HOXB4 (ENSPTRG00000009354) #21	HOXB3 (ENSPTRG00000052423) #22	HOXB2 (ENSPTRG00000009352) #23	HOXB1 (ENSPTRG00000009351) #24	SKAP1 (ENSPTRG00000009350) #25	SNX11 (ENSPTRG00000009349) #26	CBX1 (ENSPTRG00000052115) #27	NFE2L1 (ENSPTRG00000022631) #28	COPZ2 (ENSPTRG00000009346) #29	CDK5RAP3 (ENSPTRG00000009345) #30	PRR15L (ENSPTRG00000047216) #31	PNPO (ENSPTRG00000009343) #32	SP2 (ENSPTRG00000009342) #33	SP6 (ENSPTRG00000009340) #34	SCRN2 (ENSPTRG00000009339) #36	LRRC46 (ENSPTRG00000009338) #35	MRPL10 (ENSPTRG00000009337) #37
Bonobo	MODERN SPECIES	8	ENSPPAG00000029732	SNF8 (ENSPPAG00000030822) #11	ENSPPAG00000029824	ENSPPAG00000001213 #12	ATP5MC1 (ENSPPAG00000039996) #13	CALCOCO2 (ENSPPAG00000037813) #14	TTLL6 (ENSPPAG00000036197) #15	HOXB13 (ENSPPAG00000027794) #16	PRAC1 (ENSPPAG00000014004)	HOXB9 (ENSPPAG00000028486) #17	HOXB8 (ENSPPAG00000034804)	HOXB7 (ENSPPAG00000010963) #18	HOXB6 (ENSPPAG00000032229) #19	HOXB5 (ENSPPAG00000039181) #20	HOXB4 (ENSPPAG00000040659) #21	HOXB3 (ENSPPAG00000032630) #22	HOXB2 (ENSPPAG00000027417) #23	HOXB1 (ENSPPAG00000039129) #24	SKAP1 (ENSPPAG00000039277) #25	SNX11 (ENSPPAG00000033185) #26	ENSPPAG00000030413 #27	NFE2L1 (ENSPPAG00000031737) #28	COPZ2 (ENSPPAG00000043351) #29	ENSPPAG00000029145 #30	PRR15L (ENSPPAG00000003316) #31	PNPO (ENSPPAG00000038148) #32	SP2 (ENSPPAG00000027065) #33	SP6 (ENSPPAG00000026169) #34	SCRN2 (ENSPPAG00000028214) #36	LRRC46 (ENSPPAG00000038983) #35	MRPL10 (ENSPPAG00000034452) #37
Orangutan	MODERN SPECIES	8	GIP (ENSPPYG00000008912) #10	ENSPPYG00000008911 #11	UBE2Z (ENSPPYG00000032681) #12	ATP5MC1 (ENSPPYG00000008909) #13	CALCOCO2 (ENSPPYG00000008907) #14	TTLL6 (ENSPPYG00000008906) #15	HOXB13 (ENSPPYG00000008904) #16	ENSPPYG00000036609	PRAC1 (ENSPPYG00000008903)	HOXB9 (ENSPPYG00000008902) #17	HOXB8 (ENSPPYG00000038542)	HOXB7 (ENSPPYG00000008901) #18	HOXB6 (ENSPPYG00000008899) #19	HOXB5 (ENSPPYG00000008898) #20	HOXB4 (ENSPPYG00000008897) #21	HOXB3 (ENSPPYG00000008896) #22	HOXB2 (ENSPPYG00000008895) #23	HOXB1 (ENSPPYG00000008894) #24	SKAP1 (ENSPPYG00000008893) #25	SNX11 (ENSPPYG00000008892) #26	ENSPPYG00000008891 ##27	NFE2L1 (ENSPPYG00000036998) #28	ENSPPYG00000008889 #29	CDK5RAP3 (ENSPPYG00000008888) #30	PRR15L (ENSPPYG00000008887) #31	PNPO (ENSPPYG00000040967) #32	SP2 (ENSPPYG00000008885) #33	SP6 (ENSPPYG00000008884) #34	SCRN2 (ENSPPYG00000008883) #36	LRRC46 (ENSPPYG00000032761) #35	MRPL10 (ENSPPYG00000008881) #37
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00390000005121 #10	ENSGT00390000007843.u.a #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603.b #37
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00390000005121 #10	ENSGT00390000007843.u.a #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603.b #37
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00390000007843.u.a #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603.b #37
Cercopithecinae_b	ANCESTRAL SPECIES	20	ENSGT00390000005121 #10	ENSGT00390000007843.u.a #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603.b #37
Cercopithecinae_d	ANCESTRAL SPECIES	7	ENSGT00390000005121 #10	ENSGT00390000007843.u.a #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603.b #37
Sooty mangabey	MODERN SPECIES	564	ENSCATG00000044943	GIP (ENSCATG00000031593) #10	SNF8 (ENSCATG00000038375) #11	UBE2Z (ENSCATG00000038755) #12	ATP5MC1 (ENSCATG00000030174) #13	CALCOCO2 (ENSCATG00000007708) #14	ENSCATG00000016293	TTLL6 (ENSCATG00000029768) #15	HOXB13 (ENSCATG00000041758) #16	PRAC1 (ENSCATG00000038550)	HOXB9 (ENSCATG00000002169) #17	HOXB8 (ENSCATG00000025318)	HOXB7 (ENSCATG00000042829) #18	HOXB6 (ENSCATG00000043342) #19	HOXB5 (ENSCATG00000027616) #20	HOXB3 (ENSCATG00000031126) #22	HOXB4 (ENSCATG00000040704) #21	HOXB2 (ENSCATG00000035238) #23	HOXB1 (ENSCATG00000035575) #24	SKAP1 (ENSCATG00000044458) #25	ENSCATG00000019817	SNX11 (ENSCATG00000030351) #26	ENSCATG00000034735 ##27	NFE2L1 (ENSCATG00000040775) #28	COPZ2 (ENSCATG00000042708) #29	CDK5RAP3 (ENSCATG00000006699) #30	PRR15L (ENSCATG00000020186) #31	PNPO (ENSCATG00000039934) #32	ENSCATG00000003341 #33	SP6 (ENSCATG00000020123) #34	SCRN2 (ENSCATG00000038846) #36
Drill	MODERN SPECIES	1297	IGF2BP1 (ENSMLEG00000026086) #9	ENSMLEG00000043660	GIP (ENSMLEG00000032963) #10	SNF8 (ENSMLEG00000037501) #11	UBE2Z (ENSMLEG00000043345) #12	ATP5MC1 (ENSMLEG00000026746) #13	CALCOCO2 (ENSMLEG00000034129) #14	TTLL6 (ENSMLEG00000023683) #15	HOXB13 (ENSMLEG00000043860) #16	PRAC1 (ENSMLEG00000033309)	HOXB9 (ENSMLEG00000030602) #17	HOXB8 (ENSMLEG00000007179)	HOXB7 (ENSMLEG00000042331) #18	HOXB6 (ENSMLEG00000029580) #19	HOXB5 (ENSMLEG00000009970) #20	HOXB3 (ENSMLEG00000026268) #22	HOXB4 (ENSMLEG00000029897) #21	HOXB2 (ENSMLEG00000031955) #23	HOXB1 (ENSMLEG00000037557) #24	SKAP1 (ENSMLEG00000029308) #25	SNX11 (ENSMLEG00000039008) #26	CBX1 (ENSMLEG00000038745) #27	NFE2L1 (ENSMLEG00000039330) #28	COPZ2 (ENSMLEG00000039090) #29	CDK5RAP3 (ENSMLEG00000033869) #30	PRR15L (ENSMLEG00000020212) #31	PNPO (ENSMLEG00000040872) #32	SP2 (ENSMLEG00000032228) #33	SP6 (ENSMLEG00000027177) #34	SCRN2 (ENSMLEG00000041491) #36	LRRC46 (ENSMLEG00000031583) #35
Macaca	ANCESTRAL SPECIES	4	ENSGT00390000007843.u.a #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b.e #13	ENSGT00950000183025.a #14	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603.b #37
Pig-tailed macaque	MODERN SPECIES	494	SNF8 (ENSMNEG00000032473) #11	UBE2Z (ENSMNEG00000040572) #12	ENSMNEG00000011359 #13	ENSMNEG00000027016	CALCOCO2 (ENSMNEG00000041410) #14	TTLL6 (ENSMNEG00000035034) #15	HOXB13 (ENSMNEG00000036275) #16	PRAC2 (ENSMNEG00000038796)	PRAC1 (ENSMNEG00000045191)	HOXB9 (ENSMNEG00000045476) #17	HOXB8 (ENSMNEG00000034944)	HOXB7 (ENSMNEG00000040001) #18	HOXB6 (ENSMNEG00000042554) #19	HOXB5 (ENSMNEG00000039003) #20	HOXB4 (ENSMNEG00000032435) #21	HOXB3 (ENSMNEG00000032425) #22	HOXB2 (ENSMNEG00000043416) #23	HOXB1 (ENSMNEG00000036848) #24	ENSMNEG00000033446	SKAP1 (ENSMNEG00000015541) #25	SNX11 (ENSMNEG00000034920) #26	CBX1 (ENSMNEG00000039720) #27	NFE2L1 (ENSMNEG00000037921) #28	COPZ2 (ENSMNEG00000038720) #29	CDK5RAP3 (ENSMNEG00000029039) #30	PRR15L (ENSMNEG00000028174) #31	PNPO (ENSMNEG00000037010) #32	SP2 (ENSMNEG00000029577) #33	SP6 (ENSMNEG00000023861) #34	SCRN2 (ENSMNEG00000031786) #36	LRRC46 (ENSMNEG00000037035) #35
Vervet Monkey	MODERN SPECIES	7	B4GALNT2 (ENSCSAG00000002479) #8	IGF2BP1 (ENSCSAG00000002487) #9	GIP (ENSCSAG00000002491) #10	SNF8 (ENSCSAG00000002494) #11	UBE2Z (ENSCSAG00000002496) #12	ATP5MC1 (ENSCSAG00000002502) #13	CALCOCO2 (ENSCSAG00000002506) #14	TTLL6 (ENSCSAG00000002511) #15	HOXB13 (ENSCSAG00000002517) #16	HOXB9 (ENSCSAG00000002521) #17	HOXB8 (ENSCSAG00000002523)	HOXB7 (ENSCSAG00000002524) #18	HOXB6 (ENSCSAG00000002526) #19	HOXB5 (ENSCSAG00000002529) #20	HOXB4 (ENSCSAG00000002530) #21	HOXB3 (ENSCSAG00000002533) #22	HOXB2 (ENSCSAG00000002536) #23	HOXB1 (ENSCSAG00000002538) #24	ENSCSAG00000019043	SKAP1 (ENSCSAG00000002542) #25	SNX11 (ENSCSAG00000002545) #26	CBX1 (ENSCSAG00000002547) #27	NFE2L1 (ENSCSAG00000002550) #28	COPZ2 (ENSCSAG00000002558) #29	CDK5RAP3 (ENSCSAG00000002562) #30	PRR15L (ENSCSAG00000019042) #31	PNPO (ENSCSAG00000002565) #32	SP2 (ENSCSAG00000002567) #33	SP6 (ENSCSAG00000019041) #34	SCRN2 (ENSCSAG00000002569) #36	LRRC46 (ENSCSAG00000002574) #35
Rhinopithecus	ANCESTRAL SPECIES	19	ENSGT00390000005121 #10	ENSGT00390000007843.u.a #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603.b #37
Golden snub-nosed monkey	MODERN SPECIES	585	IGF2BP1 (ENSRROG00000039581) #9	GIP (ENSRROG00000029793) #10	SNF8 (ENSRROG00000041052) #11	UBE2Z (ENSRROG00000038314) #12	ATP5MC1 (ENSRROG00000031127) #13	CALCOCO2 (ENSRROG00000042598) #14	TTLL6 (ENSRROG00000044208) #15	HOXB13 (ENSRROG00000042147) #16	PRAC2 (ENSRROG00000033208)	PRAC1 (ENSRROG00000039006)	HOXB9 (ENSRROG00000044654) #17	HOXB8 (ENSRROG00000045349)	HOXB7 (ENSRROG00000035066) #18	HOXB6 (ENSRROG00000028093) #19	HOXB5 (ENSRROG00000030674) #20	HOXB3 (ENSRROG00000037630) #22	HOXB2 (ENSRROG00000044849) #23	HOXB1 (ENSRROG00000042747) #24	SKAP1 (ENSRROG00000031517) #25	SNX11 (ENSRROG00000029464) #26	CBX1 (ENSRROG00000041227) #27	NFE2L1 (ENSRROG00000044774) #28	COPZ2 (ENSRROG00000030969) #29	CDK5RAP3 (ENSRROG00000044651) #30	PRR15L (ENSRROG00000009484) #31	PNPO (ENSRROG00000044027) #32	SP2 (ENSRROG00000037481) #33	SP6 (ENSRROG00000008983) #34	SCRN2 (ENSRROG00000037252) #36	LRRC46 (ENSRROG00000039559) #35	MRPL10 (ENSRROG00000033938) #37
Black snub-nosed monkey	MODERN SPECIES	1661	GIP (ENSRBIG00000039886) #10	SNF8 (ENSRBIG00000038039) #11	UBE2Z (ENSRBIG00000038578) #12	ATP5MC1 (ENSRBIG00000026711) #13	CALCOCO2 (ENSRBIG00000035235) #14	TTLL6 (ENSRBIG00000035925) #15	HOXB13 (ENSRBIG00000035598) #16	PRAC2 (ENSRBIG00000032698)	PRAC1 (ENSRBIG00000041996)	HOXB9 (ENSRBIG00000035654) #17	HOXB8 (ENSRBIG00000043329)	HOXB7 (ENSRBIG00000039896) #18	HOXB6 (ENSRBIG00000029050) #19	HOXB5 (ENSRBIG00000015821) #20	HOXB4 (ENSRBIG00000036141) #21	HOXB3 (ENSRBIG00000036705) #22	HOXB2 (ENSRBIG00000029105) #23	HOXB1 (ENSRBIG00000041849) #24	SKAP1 (ENSRBIG00000042563) #25	SNX11 (ENSRBIG00000030129) #26	ENSRBIG00000027048 #27	NFE2L1 (ENSRBIG00000034817) #28	COPZ2 (ENSRBIG00000038810) #29	CDK5RAP3 (ENSRBIG00000039441) #30	PRR15L (ENSRBIG00000030176) #31	PNPO (ENSRBIG00000042160) #32	SP2 (ENSRBIG00000032526) #33	ENSRBIG00000039530	TXNDC2 (ENSRBIG00000040108)	ENSRBIG00000040735	OCRL (ENSRBIG00000041702)
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00390000005121 #10	ENSGT00390000007843.u.a #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Mas night monkey	MODERN SPECIES	481	GIP (ENSANAG00000030188) #10	SNF8 (ENSANAG00000032764) #11	UBE2Z (ENSANAG00000029636) #12	ATP5MC1 (ENSANAG00000024881) #13	ENSANAG00000020581 #14	TTLL6 (ENSANAG00000031133) #15	PRAC2 (ENSANAG00000025557)	HOXB13 (ENSANAG00000023991) #16	ENSANAG00000030331	HOXB9 (ENSANAG00000035156) #17	HOXB8 (ENSANAG00000028346)	HOXB7 (ENSANAG00000025513) #18	HOXB6 (ENSANAG00000023964) #19	HOXB5 (ENSANAG00000024299) #20	HOXB4 (ENSANAG00000024005) #21	HOXB3 (ENSANAG00000032072) #22	HOXB2 (ENSANAG00000023626) #23	HOXB1 (ENSANAG00000032306) #24	ENSANAG00000023400	SKAP1 (ENSANAG00000026853) #25	SNX11 (ENSANAG00000022588) #26	ENSANAG00000036853 ##27	NFE2L1 (ENSANAG00000027606) #28	COPZ2 (ENSANAG00000023309) #29	CDK5RAP3 (ENSANAG00000021880) #30	PNPO (ENSANAG00000026080) #32	SP2 (ENSANAG00000032738) #33	SP6 (ENSANAG00000019338) #34	SCRN2 (ENSANAG00000021482) #36	LRRC46 (ENSANAG00000028496) #35	MRPL10 (ENSANAG00000022792) #37
Cebidae	ANCESTRAL SPECIES	10	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.u.a #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00940000154172.gb.b.b.b	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT00390000007843.u.a #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a.t.b #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00860000135909	ENSGT01050000247531	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00940000154172.gb.b.b.b	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Bolivian squirrel monkey	MODERN SPECIES	86	SNF8 (ENSSBOG00000026186) #11	ENSSBOG00000028176	UBE2Z (ENSSBOG00000036224) #12	ENSSBOG00000028794	CALCOCO2 (ENSSBOG00000035276) #14	TTLL6 (ENSSBOG00000028908) #15	HOXB13 (ENSSBOG00000029964) #16	PRAC2 (ENSSBOG00000032603)	ENSSBOG00000030794	HOXB9 (ENSSBOG00000030218) #17	HOXB8 (ENSSBOG00000034884)	HOXB7 (ENSSBOG00000020028) #18	HOXB6 (ENSSBOG00000031900) #19	HOXB5 (ENSSBOG00000018198) #20	HOXB4 (ENSSBOG00000024432) #21	HOXB3 (ENSSBOG00000030844) #22	HOXB2 (ENSSBOG00000025070) #23	HOXB1 (ENSSBOG00000034875) #24	ENSSBOG00000019520	SKAP1 (ENSSBOG00000029434) #25	SNX11 (ENSSBOG00000026967) #26	ENSSBOG00000031880 ##27	NFE2L1 (ENSSBOG00000023867) #28	COPZ2 (ENSSBOG00000033633) #29	CDK5RAP3 (ENSSBOG00000033272) #30	PRR15L (ENSSBOG00000019240) #31	PNPO (ENSSBOG00000021213) #32	SP2 (ENSSBOG00000029098) #33	SP6 (ENSSBOG00000014210) #34	SCRN2 (ENSSBOG00000027391) #36	LRRC46 (ENSSBOG00000026980) #35
Capuchin	MODERN SPECIES	228							HOXB13 (ENSCCAG00000036871) #16	ENSCCAG00000036164	ENSCCAG00000019672	HOXB7 (ENSCCAG00000023947) #18	HOXB9 (ENSCCAG00000035938) #17	HOXB8 (ENSCCAG00000026051)	HOXB6 (ENSCCAG00000022842) #19	HOXB5 (ENSCCAG00000036867) #20	HOXB4 (ENSCCAG00000020311) #21	HOXB3 (ENSCCAG00000013598) #22	HOXB2 (ENSCCAG00000024035) #23	HOXB1 (ENSCCAG00000027667) #24	ENSCCAG00000019181	SKAP1 (ENSCCAG00000035663) #25	SNX11 (ENSCCAG00000030167) #26	CBX1 (ENSCCAG00000025085) #27	NFE2L1 (ENSCCAG00000029090) #28	COPZ2 (ENSCCAG00000021292) #29	CDK5RAP3 (ENSCCAG00000038053) #30	PNPO (ENSCCAG00000029175) #32	SP2 (ENSCCAG00000038047) #33	SP6 (ENSCCAG00000020330) #34	SCRN2 (ENSCCAG00000031435) #36	LRRC46 (ENSCCAG00000030568) #35	MRPL10 (ENSCCAG00000023150) #37
Marmoset	MODERN SPECIES	17	ENSCJAG00000079002	IGF2BP1 (ENSCJAG00000007258) #9	GIP (ENSCJAG00000007300) #10	SNF8 (ENSCJAG00000007322) #11	UBE2Z (ENSCJAG00000007326) #12	ATP5MC1 (ENSCJAG00000075375) #13	CALCOCO2 (ENSCJAG00000007375) #14	TTLL6 (ENSCJAG00000007395) #15	HOXB13 (ENSCJAG00000007437) #16	HOXB9 (ENSCJAG00000007442) #17	HOXB8 (ENSCJAG00000045730)	HOXB7 (ENSCJAG00000007457) #18	HOXB6 (ENSCJAG00000007467) #19	HOXB5 (ENSCJAG00000007472) #20	HOXB4 (ENSCJAG00000007480) #21	HOXB3 (ENSCJAG00000007487) #22	HOXB2 (ENSCJAG00000007494) #23	HOXB1 (ENSCJAG00000007496) #24	ENSCJAG00000038853	SKAP1 (ENSCJAG00000007504) #25	SNX11 (ENSCJAG00000039549) #26	CBX1 (ENSCJAG00000042052) #27	NFE2L1 (ENSCJAG00000007542) #28	ENSCJAG00000058197	COPZ2 (ENSCJAG00000007567) #29	CDK5RAP3 (ENSCJAG00000007669) #30	PRR15L (ENSCJAG00000044487) #31	PNPO (ENSCJAG00000007693) #32	SP2 (ENSCJAG00000007713) #33	SP6 (ENSCJAG00000043946) #34	SCRN2 (ENSCJAG00000047705) #36
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00950000185410	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Eulipotyphla	ANCESTRAL SPECIES	116														ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000159774 #22	ENSGT00390000017856.b #25	ENSGT00940000160113 #26
Common shrew	MODERN SPECIES	223													ENSSARG00000007970	HOXB6 (ENSSARG00000007962) #19	HOXB5 (ENSSARG00000007957) #20	ENSSARG00000007928 #22	SKAP1 (ENSSARG00000007916) #25	SNX11 (ENSSARG00000007908) #26
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00950000185410	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00950000185410	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Suina	ANCESTRAL SPECIES		ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Pig	MODERN SPECIES	3	ENSSSCG00000030269 #8	IGF2BP1 (ENSSSCG00000023128) #9	GIP (ENSSSCG00000026330) #10	SNF8 (ENSSSCG00000021461) #11	UBE2Z (ENSSSCG00000025638) #12	ATP5MC1 (ENSSSCG00000017544) #13	CALCOCO2 (ENSSSCG00000017543) #14	TTLL6 (ENSSSCG00000017542) #15	HOXB13 (ENSSSCG00000017541) #16	HOXB9 (ENSSSCG00000061856) #17	HOXB8 (ENSSSCG00000017537)	HOXB7 (ENSSSCG00000017538) #18	HOXB6 (ENSSSCG00000017539) #19	HOXB5 (ENSSSCG00000017540) #20	HOXB4 (ENSSSCG00000017535) #21	HOXB3 (ENSSSCG00000017534) #22	HOXB2 (ENSSSCG00000017533) #23	HOXB1 (ENSSSCG00000017532) #24	SKAP1 (ENSSSCG00000017527) #25	SNX11 (ENSSSCG00000017528) #26	CBX1 (ENSSSCG00000017529) #27	NFE2L1 (ENSSSCG00000017525) #28	COPZ2 (ENSSSCG00000017526) #29	CDK5RAP3 (ENSSSCG00000017524) #30	PRR15L (ENSSSCG00000054179) #31	PNPO (ENSSSCG00000032782) #32	SP2 (ENSSSCG00000017516) #33	SP6 (ENSSSCG00000017522) #34	SCRN2 (ENSSSCG00000017521) #36	LRRC46 (ENSSSCG00000017520) #35	MRPL10 (ENSSSCG00000017519) #37
Chacoan peccary	MODERN SPECIES	145	ENSCWAG00000022041	IGF2BP1 (ENSCWAG00000022044) #9	GIP (ENSCWAG00000022046) #10	SNF8 (ENSCWAG00000022048) #11	UBE2Z (ENSCWAG00000022050) #12	ATP5MC1 (ENSCWAG00000022052) #13	CALCOCO2 (ENSCWAG00000022056) #14	TTLL6 (ENSCWAG00000022059) #15	HOXB13 (ENSCWAG00000022063) #16	HOXB9 (ENSCWAG00000022065) #17	HOXB8 (ENSCWAG00000022066)	HOXB7 (ENSCWAG00000022067) #18	HOXB6 (ENSCWAG00000022069) #19	HOXB5 (ENSCWAG00000022071) #20	HOXB4 (ENSCWAG00000022074) #21	HOXB3 (ENSCWAG00000022077) #22	HOXB2 (ENSCWAG00000022078) #23	HOXB1 (ENSCWAG00000022080) #24	SKAP1 (ENSCWAG00000000046) #25	SNX11 (ENSCWAG00000000070) #26	CBX1 (ENSCWAG00000000121) #27	NFE2L1 (ENSCWAG00000000185) #28	COPZ2 (ENSCWAG00000000341) #29	CDK5RAP3 (ENSCWAG00000000377) #30	PRR15L (ENSCWAG00000000410) #31	PNPO (ENSCWAG00000000427) #32	SP2 (ENSCWAG00000000474) #33	SP6 (ENSCWAG00000000502) #34	SCRN2 (ENSCWAG00000000520) #36	LRRC46 (ENSCWAG00000000570) #35	MRPL10 (ENSCWAG00000000589) #37
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00950000185410	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Camelidae	ANCESTRAL SPECIES	60	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000154298.a.b #13	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.a.a ##27	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00950000185410	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Arabian camel	MODERN SPECIES	7	B4GALNT2 (ENSCDRG00005016644) #8	IGF2BP1 (ENSCDRG00005016778) #9	GIP (ENSCDRG00005016991) #10	ENSCDRG00005017040 #11	ENSCDRG00005017061	UBE2Z (ENSCDRG00005017075) #12	ENSCDRG00005017142	CALCOCO2 (ENSCDRG00005017213) #14	TTLL6 (ENSCDRG00005017585) #15	HOXB13 (ENSCDRG00005017741) #16	HOXB9 (ENSCDRG00005017862) #17	HOXB7 (ENSCDRG00005018007) #18	HOXB6 (ENSCDRG00005018029) #19	HOXB5 (ENSCDRG00005018055) #20	HOXB4 (ENSCDRG00005018079) #21	HOXB3 (ENSCDRG00005018104) #22	HOXB2 (ENSCDRG00005018121) #23	HOXB1 (ENSCDRG00005018147) #24	SKAP1 (ENSCDRG00005018166) #25	SNX11 (ENSCDRG00005018232) #26	CBX1 (ENSCDRG00005018330) ##27	NFE2L1 (ENSCDRG00005018357) #28	ENSCDRG00005018515	COPZ2 (ENSCDRG00005018538) #29	CDK5RAP3 (ENSCDRG00005018564) #30	PRR15L (ENSCDRG00005018636) #31	SP2 (ENSCDRG00005018756) #33	SP6 (ENSCDRG00005018791) #34	SCRN2 (ENSCDRG00005018805) #36	LRRC46 (ENSCDRG00005018865) #35	MRPL10 (ENSCDRG00005018906) #37
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00950000185410	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Pecora	ANCESTRAL SPECIES	1	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00950000185410	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Percora_a	ANCESTRAL SPECIES	2	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Bovidae	ANCESTRAL SPECIES	2	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Bovinae	ANCESTRAL SPECIES		ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Bos	ANCESTRAL SPECIES	1	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00940000154688.b.k.a	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.i #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590.e.b #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Bos_b	ANCESTRAL SPECIES	15	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00940000154688.b.k.a	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.i #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590.e.b #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Cow	MODERN SPECIES	10	B4GALNT2 (ENSBTAG00000009864) #8	IGF2BP1 (ENSBTAG00000011736) #9	GIP (ENSBTAG00000005045) #10	SNF8 (ENSBTAG00000018803) #11	UBE2Z (ENSBTAG00000018802) #12	ATP5MC1 (ENSBTAG00000018339)	CALCOCO2 (ENSBTAG00000007935) #14	TTLL6 (ENSBTAG00000009332) #15	HOXB13 (ENSBTAG00000014663) #16	HOXB9 (ENSBTAG00000054623) #17	HOXB8 (ENSBTAG00000054162)	HOXB7 (ENSBTAG00000005546) #18	HOXB6 (ENSBTAG00000050006) #19	HOXB5 (ENSBTAG00000045835) #20	HOXB4 (ENSBTAG00000039599) #21	HOXB3 (ENSBTAG00000021427) #22	HOXB2 (ENSBTAG00000009979) #23	HOXB1 (ENSBTAG00000007603) #24	SKAP1 (ENSBTAG00000000641) #25	SNX11 (ENSBTAG00000020321) #26	CBX1 (ENSBTAG00000002949) #27	NFE2L1 (ENSBTAG00000013653) #28	COPZ2 (ENSBTAG00000039954) #29	CDK5RAP3 (ENSBTAG00000014202) #30	PRR15L (ENSBTAG00000012249) #31	PNPO (ENSBTAG00000012259) #32	SP2 (ENSBTAG00000013740) #33	SP6 (ENSBTAG00000001825) #34	SCRN2 (ENSBTAG00000001828) #36	LRRC46 (ENSBTAG00000001830) #35	MRPL10 (ENSBTAG00000001832) #37
Hybrid Bos Indicus	MODERN SPECIES	10	B4GALNT2 (ENSBIXG00005007929) #8	IGF2BP1 (ENSBIXG00005007917) #9	GIP (ENSBIXG00005007892) #10	SNF8 (ENSBIXG00005007866) #11	UBE2Z (ENSBIXG00005029277) #12	ENSBIXG00005029305	CALCOCO2 (ENSBIXG00005029366) #14	ENSBIXG00005029447 #15	HOXB13 (ENSBIXG00005029474) #16	HOXB9 (ENSBIXG00005029519) #17	HOXB8 (ENSBIXG00005029530)	HOXB7 (ENSBIXG00005029546) #18	HOXB6 (ENSBIXG00005029554) #19	HOXB5 (ENSBIXG00005029559) #20	HOXB4 (ENSBIXG00005029577) #21	HOXB3 (ENSBIXG00005029591) #22	HOXB2 (ENSBIXG00005029607) #23	HOXB1 (ENSBIXG00005029618) #24	ENSBIXG00005029636	SKAP1 (ENSBIXG00005029657) #25	SNX11 (ENSBIXG00005029679) #26	CBX1 (ENSBIXG00005029691) #27	NFE2L1 (ENSBIXG00005029748) #28	COPZ2 (ENSBIXG00005029862) #29	CDK5RAP3 (ENSBIXG00005029886) #30	PRR15L (ENSBIXG00005029905) #31	PNPO (ENSBIXG00005029918) #32	ENSBIXG00005029934 #33	SP6 (ENSBIXG00005029948) #34	SCRN2 (ENSBIXG00005029976) #36	LRRC46 (ENSBIXG00005030008) #35
Bos_a	ANCESTRAL SPECIES		ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00940000154688.b.k.a	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b.i #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590.e.b #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Wild yak	MODERN SPECIES	319	B4GALNT2 (ENSBMUG00000000477) #8	IGF2BP1 (ENSBMUG00000000549) #9	GIP (ENSBMUG00000000594) #10	SNF8 (ENSBMUG00000000607) #11	UBE2Z (ENSBMUG00000000624) #12	ENSBMUG00000000644	CALCOCO2 (ENSBMUG00000000720) #14	ENSBMUG00000000753 #15	HOXB13 (ENSBMUG00000000770) #16	HOXB9 (ENSBMUG00000000804) #17	HOXB8 (ENSBMUG00000000824)	HOXB7 (ENSBMUG00000000832) #18	HOXB6 (ENSBMUG00000000839) #19	HOXB5 (ENSBMUG00000000849) #20	HOXB4 (ENSBMUG00000000867) #21	HOXB3 (ENSBMUG00000000876) #22	HOXB2 (ENSBMUG00000000885) #23	HOXB1 (ENSBMUG00000000891) #24	ENSBMUG00000000901	SKAP1 (ENSBMUG00000000925) #25	SNX11 (ENSBMUG00000000953) #26	CBX1 (ENSBMUG00000000974) #27	NFE2L1 (ENSBMUG00000001054) #28	COPZ2 (ENSBMUG00000001081) #29	CDK5RAP3 (ENSBMUG00000001110) #30	ENSBMUG00000001125 #31	PNPO (ENSBMUG00000001160) #32	SP2 (ENSBMUG00000001179) #33
Domestic yak	MODERN SPECIES	10	ABI3 (ENSBGRG00000022961)	B4GALNT2 (ENSBGRG00000022672) #8	IGF2BP1 (ENSBGRG00000022442) #9	GIP (ENSBGRG00000022397) #10	SNF8 (ENSBGRG00000022296) #11	UBE2Z (ENSBGRG00000022223) #12	ENSBGRG00000022156	CALCOCO2 (ENSBGRG00000021810) #14	TTLL6 (ENSBGRG00000021744) #15	HOXB13 (ENSBGRG00000021718) #16	HOXB9 (ENSBGRG00000021683) #17	HOXB8 (ENSBGRG00000021618)	HOXB6 (ENSBGRG00000021579) #19	HOXB5 (ENSBGRG00000021555) #20	HOXB4 (ENSBGRG00000021501) #21	HOXB3 (ENSBGRG00000021464) #22	HOXB2 (ENSBGRG00000021425) #23	HOXB1 (ENSBGRG00000021404) #24	SKAP1 (ENSBGRG00000021202) #25	SNX11 (ENSBGRG00000021141) #26	CBX1 (ENSBGRG00000021062) #27	NFE2L1 (ENSBGRG00000020783) #28	COPZ2 (ENSBGRG00000020574) #29	CDK5RAP3 (ENSBGRG00000020283) #30	ENSBGRG00000020194 #31	PNPO (ENSBGRG00000019898) #32	ENSBGRG00000019774 #33	SP6 (ENSBGRG00000019744) #34	SCRN2 (ENSBGRG00000019672) #36	LRRC46 (ENSBGRG00000019490) #35	MRPL10 (ENSBGRG00000019422) #37
American bison	MODERN SPECIES	3101	GNGT2 (ENSBBBG00000021294) #7	B4GALNT2 (ENSBBBG00000021305) #8	IGF2BP1 (ENSBBBG00000021334) #9	GIP (ENSBBBG00000021349) #10	SNF8 (ENSBBBG00000021356) #11	UBE2Z (ENSBBBG00000021371) #12	ATP5MC1 (ENSBBBG00000021377) #13	CALCOCO2 (ENSBBBG00000005726) #14	TTLL6 (ENSBBBG00000021540) #15	HOXB13 (ENSBBBG00000021546) #16	HOXB9 (ENSBBBG00000021558) #17	HOXB7 (ENSBBBG00000021565) #18	HOXB6 (ENSBBBG00000021567) #19	HOXB5 (ENSBBBG00000021577) #20	HOXB4 (ENSBBBG00000021585) #21	HOXB3 (ENSBBBG00000005740) #22	HOXB2 (ENSBBBG00000021598) #23	HOXB1 (ENSBBBG00000021601) #24	SKAP1 (ENSBBBG00000021634) #25	SNX11 (ENSBBBG00000021652) #26	ENSBBBG00000021675 ##27	NFE2L1 (ENSBBBG00000021740) #28	COPZ2 (ENSBBBG00000021782) #29	CDK5RAP3 (ENSBBBG00000021808) #30	PRR15L (ENSBBBG00000021809) #31	PNPO (ENSBBBG00000021862) #32	SP2 (ENSBBBG00000021914) #33	SP6 (ENSBBBG00000021924) #34	SCRN2 (ENSBBBG00000021958) #36	LRRC46 (ENSBBBG00000021972) #35	MRPL10 (ENSBBBG00000021983) #37
Caprinae	ANCESTRAL SPECIES	1	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843.g.a #11	ENSGT01100000264599	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00940000154688.b.j	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Rambouillet Sheep	MODERN SPECIES	2	ENSOARG00020022839	IGF2BP1 (ENSOARG00020022766) #9	GIP (ENSOARG00020022695) #10	UBE2Z (ENSOARG00020022664) #12	ATP5MC1 (ENSOARG00020022590)	CALCOCO2 (ENSOARG00020022295) #14	ENSOARG00020022258 #15	SNF8 (ENSOARG00020022227) #11	HOXB13 (ENSOARG00020022195) #16	HOXB9 (ENSOARG00020022138) #17	HOXB8 (ENSOARG00020022064)	HOXB7 (ENSOARG00020022042) #18	HOXB6 (ENSOARG00020022021) #19	HOXB5 (ENSOARG00020022004) #20	HOXB4 (ENSOARG00020021954) #21	HOXB3 (ENSOARG00020021943) #22	HOXB2 (ENSOARG00020021907) #23	HOXB1 (ENSOARG00020021886) #24	SKAP1 (ENSOARG00020021817) #25	SNX11 (ENSOARG00020021783) #26	CBX1 (ENSOARG00020021741) #27	NFE2L1 (ENSOARG00020021460) #28	COPZ2 (ENSOARG00020021377) #29	CDK5RAP3 (ENSOARG00020021339) #30	PRR15L (ENSOARG00020021319) #31	PNPO (ENSOARG00020021017) #32	SP2 (ENSOARG00020020972) #33	SP6 (ENSOARG00020020944) #34	SCRN2 (ENSOARG00020020770) #36	LRRC46 (ENSOARG00020020663) #35	MRPL10 (ENSOARG00020020614) #37
Goat	MODERN SPECIES	10	IGF2BP1 (ENSCHIG00000022316) #9	GIP (ENSCHIG00000010936) #10	SNF8 (ENSCHIG00000014794) #11	ENSCHIG00000020962	UBE2Z (ENSCHIG00000003883) #12	ENSCHIG00000016881	CALCOCO2 (ENSCHIG00000025313) #14	TTLL6 (ENSCHIG00000022654) #15	HOXB13 (ENSCHIG00000026703) #16	HOXB9 (ENSCHIG00000022791) #17	HOXB8 (ENSCHIG00000015504)	HOXB7 (ENSCHIG00000017532) #18	HOXB6 (ENSCHIG00000008881) #19	HOXB5 (ENSCHIG00000023147) #20	HOXB4 (ENSCHIG00000025323) #21	HOXB3 (ENSCHIG00000013978) #22	HOXB2 (ENSCHIG00000025836) #23	HOXB1 (ENSCHIG00000017872) #24	ENSCHIG00000010180	ENSCHIG00000015920 #25	ENSCHIG00000026878 #25	SNX11 (ENSCHIG00000017547) #26	CBX1 (ENSCHIG00000010985) #27	NFE2L1 (ENSCHIG00000015427) #28	COPZ2 (ENSCHIG00000026544) #29	CDK5RAP3 (ENSCHIG00000025420) #30	PRR15L (ENSCHIG00000008261) #31	PNPO (ENSCHIG00000004606) #32	SP2 (ENSCHIG00000018648) #33	SP6 (ENSCHIG00000009897) #34	SCRN2 (ENSCHIG00000026802) #36
Siberian musk deer	MODERN SPECIES	1210	IGF2BP1 (ENSMMSG00000024501) #9	GIP (ENSMMSG00000024503) #10	ENSMMSG00000024504 #11	UBE2Z (ENSMMSG00000024505) #12	ATP5MC1 (ENSMMSG00000024506) #13	CALCOCO2 (ENSMMSG00000024509) #14	TTLL6 (ENSMMSG00000024514) #15	HOXB13 (ENSMMSG00000024516) #16	HOXB9 (ENSMMSG00000024520) #17	HOXB8 (ENSMMSG00000024522)	HOXB7 (ENSMMSG00000024523) #18	HOXB6 (ENSMMSG00000024525) #19	HOXB5 (ENSMMSG00000024526) #20	HOXB4 (ENSMMSG00000024528) #21	ENSMMSG00000024530	HOXB3 (ENSMMSG00000024531) #22	HOXB2 (ENSMMSG00000024532) #23	HOXB1 (ENSMMSG00000024533) #24	ENSMMSG00000024535	SKAP1 (ENSMMSG00000024536) #25	SNX11 (ENSMMSG00000024538) #26	CBX1 (ENSMMSG00000024540) #27	NFE2L1 (ENSMMSG00000024541) #28	COPZ2 (ENSMMSG00000024546) #29	CDK5RAP3 (ENSMMSG00000024548) #30	PRR15L (ENSMMSG00000024549) #31	PNPO (ENSMMSG00000024550) #32	SP2 (ENSMMSG00000024551) #33	SP6 (ENSMMSG00000018224) #34	SCRN2 (ENSMMSG00000018238) #36	LRRC46 (ENSMMSG00000018351) #35
Yarkand deer	MODERN SPECIES	28	IGF2BP1 (ENSCHYG00000004387) #9	GIP (ENSCHYG00000004425) #10	SNF8 (ENSCHYG00000004443) #11	UBE2Z (ENSCHYG00000004456) #12	ENSCHYG00000004476	ENSCHYG00000004493	ENSCHYG00000004521 #14	TTLL6 (ENSCHYG00000004571) #15	HOXB13 (ENSCHYG00000004599) #16	HOXB9 (ENSCHYG00000004623) #17	HOXB8 (ENSCHYG00000004637)	HOXB7 (ENSCHYG00000004645) #18	HOXB6 (ENSCHYG00000004651) #19	HOXB5 (ENSCHYG00000004658) #20	HOXB4 (ENSCHYG00000004668) #21	HOXB3 (ENSCHYG00000004670) #22	HOXB2 (ENSCHYG00000004674) #23	HOXB1 (ENSCHYG00000004684) #24	SKAP1 (ENSCHYG00000004692) #25	ENSCHYG00000004720	SNX11 (ENSCHYG00000004737) #26	CBX1 (ENSCHYG00000004750) #27	NFE2L1 (ENSCHYG00000004781) #28	COPZ2 (ENSCHYG00000004829) #29	ENSCHYG00000004851	CDK5RAP3 (ENSCHYG00000000101) #30	PRR15L (ENSCHYG00000000125) #31	PNPO (ENSCHYG00000000157) #32	SP2 (ENSCHYG00000000198) #33	SP6 (ENSCHYG00000000221) #34	SCRN2 (ENSCHYG00000000227) #36
Cetacea	ANCESTRAL SPECIES	5	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.g	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Odontoceti	ANCESTRAL SPECIES	16	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.g	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Odontoceti_a	ANCESTRAL SPECIES	14	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.g	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Dolphin	MODERN SPECIES	4465										HOXB9 (ENSTTRG00000012262) #17	HOXB8 (ENSTTRG00000012260)	ENSTTRG00000012257	HOXB6 (ENSTTRG00000012252) #19	HOXB5 (ENSTTRG00000012251) #20	HOXB4 (ENSTTRG00000012249) #21	HOXB3 (ENSTTRG00000012246) #22	HOXB2 (ENSTTRG00000012244) #23	HOXB1 (ENSTTRG00000012240) #24
Odontoceti_b	ANCESTRAL SPECIES	16	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.g	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Vaquita	MODERN SPECIES	12	ENSPSNG00000016103	IGF2BP1 (ENSPSNG00000016168) #9	GIP (ENSPSNG00000016483) #10	SNF8 (ENSPSNG00000016533) #11	UBE2Z (ENSPSNG00000016576) #12	ENSPSNG00000016635	CALCOCO2 (ENSPSNG00000016749) #14	TTLL6 (ENSPSNG00000017015) #15	HOXB13 (ENSPSNG00000017233) #16	HOXB9 (ENSPSNG00000017398) #17	HOXB8 (ENSPSNG00000017436)	HOXB7 (ENSPSNG00000017482) #18	HOXB6 (ENSPSNG00000017525) #19	HOXB5 (ENSPSNG00000017559) #20	HOXB4 (ENSPSNG00000017604) #21	HOXB3 (ENSPSNG00000017636) #22	HOXB2 (ENSPSNG00000017708) #23	HOXB1 (ENSPSNG00000017728) #24	SKAP1 (ENSPSNG00000017760) #25	SNX11 (ENSPSNG00000017889) #26	ENSPSNG00000017984 #27	NFE2L1 (ENSPSNG00000018052) #28	COPZ2 (ENSPSNG00000018262) #29	CDK5RAP3 (ENSPSNG00000018321) #30	PRR15L (ENSPSNG00000018399) #31	PNPO (ENSPSNG00000018423) #32	SP2 (ENSPSNG00000018528) #33	SP6 (ENSPSNG00000018568) #34	SCRN2 (ENSPSNG00000018588) #36	LRRC46 (ENSPSNG00000018676) #35	ENSPSNG00000018757
Monodontidae	ANCESTRAL SPECIES	16	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.g	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Beluga whale	MODERN SPECIES	26	B4GALNT2 (ENSDLEG00000004906) #8	IGF2BP1 (ENSDLEG00000004887) #9	GIP (ENSDLEG00000004882) #10	SNF8 (ENSDLEG00000004876) #11	UBE2Z (ENSDLEG00000004871) #12	ATP5G1 (ENSDLEG00000004867)	CALCOCO2 (ENSDLEG00000004861) #14	TTLL6 (ENSDLEG00000004850) #15	HOXB13 (ENSDLEG00000004844) #16	HOXB9 (ENSDLEG00000004838) #17	HOXB8 (ENSDLEG00000004837)	HOXB7 (ENSDLEG00000004834) #18	HOXB6 (ENSDLEG00000004829) #19	HOXB5 (ENSDLEG00000004826) #20	HOXB4 (ENSDLEG00000004820) #21	HOXB3 (ENSDLEG00000004817) #22	HOXB2 (ENSDLEG00000004813) #23	HOXB1 (ENSDLEG00000004807) #24	SKAP1 (ENSDLEG00000004779) #25	SNX11 (ENSDLEG00000004765) #26	CBX1 (ENSDLEG00000004754) ##27	NFE2L1 (ENSDLEG00000004744) #28	ENSDLEG00000004734	COPZ2 (ENSDLEG00000004721) #29	CDK5RAP3 (ENSDLEG00000004709) #30	PRR15L (ENSDLEG00000004704) #31	PNPO (ENSDLEG00000004701) #32	SP2 (ENSDLEG00000004697) #33	SP6 (ENSDLEG00000004694) #34	SCRN2 (ENSDLEG00000004688) #36	ENSDLEG00000004684
Narwhal	MODERN SPECIES	316	B4GALNT2 (ENSMMNG00015022052) #8	IGF2BP1 (ENSMMNG00015022053) #9	GIP (ENSMMNG00015022055) #10	ENSMMNG00015022056 #11	UBE2Z (ENSMMNG00015022057) #12	ENSMMNG00015022058	CALCOCO2 (ENSMMNG00015022060) #14	TTLL6 (ENSMMNG00015015987) #15	HOXB13 (ENSMMNG00015016080) #16	HOXB9 (ENSMMNG00015016160) #17	HOXB8 (ENSMMNG00015016175)	HOXB7 (ENSMMNG00015016197) #18	HOXB6 (ENSMMNG00015016215) #19	HOXB5 (ENSMMNG00015016235) #20	HOXB4 (ENSMMNG00015016252) #21	HOXB3 (ENSMMNG00015016287) #22	HOXB2 (ENSMMNG00015016324) #23	HOXB1 (ENSMMNG00015016356) #24	SKAP1 (ENSMMNG00015016386) #25	SNX11 (ENSMMNG00015016452) #26	CBX1 (ENSMMNG00015016582) #27	NFE2L1 (ENSMMNG00015016634) #28	COPZ2 (ENSMMNG00015016743) #29	CDK5RAP3 (ENSMMNG00015016820) #30	PRR15L (ENSMMNG00015016868) #31	PNPO (ENSMMNG00015016895) #32	SP2 (ENSMMNG00015016948) #33	SP6 (ENSMMNG00015016969) #34	SCRN2 (ENSMMNG00015016985) #36	LRRC46 (ENSMMNG00015017038) #35	MRPL10 (ENSMMNG00015017084) #37
Sperm whale	MODERN SPECIES	5	B4GALNT2 (ENSPCTG00005004337) #8	IGF2BP1 (ENSPCTG00005004404) #9	GIP (ENSPCTG00005004443) #10	ENSPCTG00005004464	SNF8 (ENSPCTG00005004481) #11	ATP5MC1 (ENSPCTG00005004516) #12	CALCOCO2 (ENSPCTG00005004611) #14	TTLL6 (ENSPCTG00005004739) #15	HOXB13 (ENSPCTG00005004788) #16	HOXB9 (ENSPCTG00005004847) #17	HOXB8 (ENSPCTG00005004864)	HOXB7 (ENSPCTG00005004882) #18	HOXB6 (ENSPCTG00005004887) #19	HOXB5 (ENSPCTG00005004905) #20	HOXB4 (ENSPCTG00005004920) #21	HOXB3 (ENSPCTG00005004930) #22	HOXB2 (ENSPCTG00005004951) #23	HOXB1 (ENSPCTG00005004966) #24	SKAP1 (ENSPCTG00005004985) #25	CBX1 (ENSPCTG00005005034) #27	ENSPCTG00005005083 #33	TBX21 (ENSPCTG00005005105)	TBKBP1 (ENSPCTG00005005144)	KPNB1 (ENSPCTG00005005195)	NPEPPS (ENSPCTG00005005245)	GPR179 (ENSPCTG00005005545)	SOCS7 (ENSPCTG00005005634)	ARHGAP23 (ENSPCTG00005005753)	SRCIN1 (ENSPCTG00005005823)	ENSPCTG00005006189	PSMB3 (ENSPCTG00005006224)
Blue whale	MODERN SPECIES	12	IGF2BP1 (ENSBMSG00010016894) #9	GIP (ENSBMSG00010017026) #10	SNF8 (ENSBMSG00010017067) #11	UBE2Z (ENSBMSG00010017102) #12	ATP5MC1 (ENSBMSG00010017142) #13	ENSBMSG00010017179	CALCOCO2 (ENSBMSG00010017255) #14	TTLL6 (ENSBMSG00010017444) #15	HOXB13 (ENSBMSG00010017547) #16	HOXB9 (ENSBMSG00010017655) #17	HOXB8 (ENSBMSG00010017685)	HOXB7 (ENSBMSG00010017724) #18	HOXB6 (ENSBMSG00010017746) #19	HOXB5 (ENSBMSG00010017772) #20	HOXB4 (ENSBMSG00010017814) #21	HOXB3 (ENSBMSG00010017838) #22	HOXB2 (ENSBMSG00010017860) #23	HOXB1 (ENSBMSG00010017892) #24	SKAP1 (ENSBMSG00010017921) #25	SNX11 (ENSBMSG00010018006) #26	CBX1 (ENSBMSG00010018099) #27	NFE2L1 (ENSBMSG00010018163) #28	COPZ2 (ENSBMSG00010018306) #29	CDK5RAP3 (ENSBMSG00010018481) #30	PRR15L (ENSBMSG00010018513) #31	PNPO (ENSBMSG00010018544) #32	SP2 (ENSBMSG00010018607) #33	SP6 (ENSBMSG00010018628) #34	ENSBMSG00010018650	ENSBMSG00010018673	ENSBMSG00010018688
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00950000185410	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Carnivora	ANCESTRAL SPECIES	9	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00950000185410	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Caniformia	ANCESTRAL SPECIES	6	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00950000185410	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Canidae	ANCESTRAL SPECIES	2	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.c	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.c	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Dingo	MODERN SPECIES	150	ENSCAFG00020023382	IGF2BP1 (ENSCAFG00020023369) #9	GIP (ENSCAFG00020023360) #10	SNF8 (ENSCAFG00020023354) #11	UBE2Z (ENSCAFG00020023351) #12	ENSCAFG00020023349	CALCOCO2 (ENSCAFG00020023334) #14	TTLL6 (ENSCAFG00020023324) #15	HOXB13 (ENSCAFG00020023319) #16	HOXB9 (ENSCAFG00020023312) #17	HOXB8 (ENSCAFG00020023306)	ENSCAFG00020023303 #18	HOXB6 (ENSCAFG00020023302) #19	HOXB5 (ENSCAFG00020023301) #20	HOXB4 (ENSCAFG00020023297) #21	HOXB3 (ENSCAFG00020023294) #22	HOXB2 (ENSCAFG00020023293) #23	HOXB1 (ENSCAFG00020023290) #24	SKAP1 (ENSCAFG00020023287) #25	SNX11 (ENSCAFG00020023282) #26	CBX1 (ENSCAFG00020023275) #27	NFE2L1 (ENSCAFG00020023270) #28	COPZ2 (ENSCAFG00020023263) #29	CDK5RAP3 (ENSCAFG00020023258) #30	PRR15L (ENSCAFG00020023256) #31	PNPO (ENSCAFG00020023249) #32	SP2 (ENSCAFG00020023246) #33	SP6 (ENSCAFG00020023243) #34	SCRN2 (ENSCAFG00020023238) #36	LRRC46 (ENSCAFG00020023236) #35	MRPL10 (ENSCAFG00020023232) #37
Dog	MODERN SPECIES	37	B4GALNT2 (ENSCAFG00845010693) #8	IGF2BP1 (ENSCAFG00845010596) #9	GIP (ENSCAFG00845010532) #10	SNF8 (ENSCAFG00845010455) #11	UBE2Z (ENSCAFG00845010395) #12	ATP5MC1 (ENSCAFG00845010336)	CALCOCO2 (ENSCAFG00845010119) #14	TTLL6 (ENSCAFG00845010017) #15	HOXB13 (ENSCAFG00845009992) #16	HOXB9 (ENSCAFG00845009956) #17	HOXB8 (ENSCAFG00845009931)	HOXB7 (ENSCAFG00845009899) #18	HOXB6 (ENSCAFG00845009871) #19	HOXB5 (ENSCAFG00845009832) #20	HOXB4 (ENSCAFG00845017264) #21	HOXB3 (ENSCAFG00845017188) #22	HOXB2 (ENSCAFG00845017142) #23	HOXB1 (ENSCAFG00845017096) #24	SKAP1 (ENSCAFG00845016959) #25	SNX11 (ENSCAFG00845016720) #26	CBX1 (ENSCAFG00845016596) #27	NFE2L1 (ENSCAFG00845016388) #28	COPZ2 (ENSCAFG00845016156) #29	CDK5RAP3 (ENSCAFG00845016051) #30	ENSCAFG00845016000	PRR15L (ENSCAFG00845015978) #31	PNPO (ENSCAFG00845015876) #32	SP2 (ENSCAFG00845015786) #33	SP6 (ENSCAFG00845015746) #34	SCRN2 (ENSCAFG00845015686) #36	LRRC46 (ENSCAFG00845015603) #35
Red fox	MODERN SPECIES	20	ENSVVUG00000003456	IGF2BP1 (ENSVVUG00000003451) #9	GIP (ENSVVUG00000003440) #10	SNF8 (ENSVVUG00000003434) #11	UBE2Z (ENSVVUG00000003424) #12	ATP5MC1 (ENSVVUG00000003411)	CALCOCO2 (ENSVVUG00000003399) #14	TTLL6 (ENSVVUG00000003393) #15	HOXB13 (ENSVVUG00000003382) #16	HOXB9 (ENSVVUG00000003367) #17	HOXB8 (ENSVVUG00000003366)	HOXB7 (ENSVVUG00000003360) #18	HOXB6 (ENSVVUG00000003359) #19	HOXB5 (ENSVVUG00000003354) #20	ENSVVUG00000003340 #21	HOXB3 (ENSVVUG00000003329) #22	HOXB2 (ENSVVUG00000003328) #23	HOXB1 (ENSVVUG00000003325) #24	SKAP1 (ENSVVUG00000003297) #25	SNX11 (ENSVVUG00000003276) #26	ENSVVUG00000003272 #27	NFE2L1 (ENSVVUG00000003262) #28	COPZ2 (ENSVVUG00000003249) #29	CDK5RAP3 (ENSVVUG00000003227) #30	PRR15L (ENSVVUG00000003218) #31	PNPO (ENSVVUG00000003178) #32	SP2 (ENSVVUG00000003171) #33	SP6 (ENSVVUG00000003167) #34	SCRN2 (ENSVVUG00000003154) #36	LRRC46 (ENSVVUG00000003146) #35	MRPL10 (ENSVVUG00000003141) #37
Caniformia_b	ANCESTRAL SPECIES	21	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00950000185410	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Ursidae	ANCESTRAL SPECIES	18	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00950000185410	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
Giant Panda	MODERN SPECIES	4	IGF2BP1 (ENSAMEG00000005087) #9	GIP (ENSAMEG00000005081) #10	SNF8 (ENSAMEG00000005062) #11	UBE2Z (ENSAMEG00000005049) #12	ATP5MC1 (ENSAMEG00000005038)	CALCOCO2 (ENSAMEG00000005015) #14	ENSAMEG00000005000 #15	HOXB13 (ENSAMEG00000026873) #16	ENSAMEG00000026258	HOXB9 (ENSAMEG00000024921) #17	ENSAMEG00000004982	HOXB7 (ENSAMEG00000004977) #18	HOXB6 (ENSAMEG00000004971) #19	HOXB5 (ENSAMEG00000004967) #20	HOXB4 (ENSAMEG00000028329) #21	HOXB3 (ENSAMEG00000027375) #22	HOXB2 (ENSAMEG00000030987) #23	HOXB1 (ENSAMEG00000004935) #24	SKAP1 (ENSAMEG00000004919) #25	SNX11 (ENSAMEG00000004898) #26	CBX1 (ENSAMEG00000004890) #27	NFE2L1 (ENSAMEG00000004881) #28	COPZ2 (ENSAMEG00000004850) #29	ENSAMEG00000030152	CDK5RAP3 (ENSAMEG00000004818) #30	PRR15L (ENSAMEG00000025744) #31	PNPO (ENSAMEG00000004786) #32	SP2 (ENSAMEG00000004772) #33	SCRN2 (ENSAMEG00000004751) #36	LRRC46 (ENSAMEG00000004734) #35	MRPL10 (ENSAMEG00000004722) #37
Ursus	ANCESTRAL SPECIES	67	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00950000185410	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
American black bear	MODERN SPECIES	4290																HOXB3 (ENSUAMG00000008864) #22	HOXB2 (ENSUAMG00000008866) #23	HOXB1 (ENSUAMG00000008868) #24
Mustelinae	ANCESTRAL SPECIES	2	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00990000209473	ENSGT00940000159091 #12	ENSGT00940000159720	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00950000185410	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
American mink	MODERN SPECIES	92	IGF2BP1 (ENSNVIG00000006377) #9	GIP (ENSNVIG00000006361) #10	ENSNVIG00000006352 #11	ENSNVIG00000006339	UBE2Z (ENSNVIG00000006316) #12	ENSNVIG00000006295	CALCOCO2 (ENSNVIG00000006167) #14	TTLL6 (ENSNVIG00000006132) #15	HOXB13 (ENSNVIG00000006117) #16	HOXB9 (ENSNVIG00000006082) #17	HOXB8 (ENSNVIG00000006066)	HOXB7 (ENSNVIG00000006060) #18	HOXB6 (ENSNVIG00000006053) #19	HOXB5 (ENSNVIG00000006049) #20	HOXB4 (ENSNVIG00000006040) #21	HOXB3 (ENSNVIG00000006032) #22	HOXB2 (ENSNVIG00000006024) #23	HOXB1 (ENSNVIG00000006017) #24	ENSNVIG00000006009	SKAP1 (ENSNVIG00000005974) #25	SNX11 (ENSNVIG00000005959) #26	CBX1 (ENSNVIG00000005946) #27	NFE2L1 (ENSNVIG00000005857) #28	ENSNVIG00000005842	COPZ2 (ENSNVIG00000005837) #29	CDK5RAP3 (ENSNVIG00000005742) #30	PR15L (ENSNVIG00000005731) #31	PNPO (ENSNVIG00000005692) #32	SP2 (ENSNVIG00000005673) #33	SP6 (ENSNVIG00000005667) #34	SCRN2 (ENSNVIG00000005641) #36
Felidae	ANCESTRAL SPECIES	8	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.f.a	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000013771.p	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00950000185410	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36
Cat	MODERN SPECIES	245	B4GALNT2 (ENSFCAG00000018523) #8	IGF2BP1 (ENSFCAG00000002454) #9	GIP (ENSFCAG00000008946) #10	SNF8 (ENSFCAG00000008944) #11	UBE2Z (ENSFCAG00000045462) #12	ENSFCAG00000002344	CALCOCO2 (ENSFCAG00000010622) #14	TTLL6 (ENSFCAG00000010617) #15	HOXB13 (ENSFCAG00000002120) #16	HOXB9 (ENSFCAG00000035234) #17	HOXB8 (ENSFCAG00000036979)	HOXB7 (ENSFCAG00000002118) #18	HOXB6 (ENSFCAG00000034768) #19	HOXB5 (ENSFCAG00000039068) #20	HOXB4 (ENSFCAG00000051422) #21	HOXB3 (ENSFCAG00000006408) #22	HOXB2 (ENSFCAG00000045039) #23	HOXB1 (ENSFCAG00000028151) #24	ENSFCAG00000034133	SKAP1 (ENSFCAG00000004784) #25	SNX11 (ENSFCAG00000009371) #26	CBX1 (ENSFCAG00000006056) ##27	NFE2L1 (ENSFCAG00000009369) #28	COPZ2 (ENSFCAG00000034233) #29	CDK5RAP3 (ENSFCAG00000009367) #30	PRR15L (ENSFCAG00000009366) #31	PNPO (ENSFCAG00000001300) #32	SP2 (ENSFCAG00000009365) #33	SP6 (ENSFCAG00000009363) #34	SCRN2 (ENSFCAG00000009362) #36	LRRC46 (ENSFCAG00000045119) #35
Panthera	ANCESTRAL SPECIES	14	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.f.a	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000013771.p	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00950000185410	ENSGT00390000004405.b #29	ENSGT00940000154534.a #31	ENSGT00390000000713 #30	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36
Panthera_a	ANCESTRAL SPECIES	13	ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.f.a	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000013771.p	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00940000154534.a #31	ENSGT00390000000713 #30	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35
leopard	MODERN SPECIES	67	B4GALNT2 (ENSPPRG00000008636) #8	IGF2BP1 (ENSPPRG00000008067) #9	GIP (ENSPPRG00000007119) #10	ENSPPRG00000007008 #11	UBE2Z (ENSPPRG00000005626) #12	ENSPPRG00000005588	CALCOCO2 (ENSPPRG00000004550) #14	TTLL6 (ENSPPRG00000003004) #15	HOXB13 (ENSPPRG00000001633) #16	HOXB9 (ENSPPRG00000001578) #17	HOXB8 (ENSPPRG00000001156)	HOXB7 (ENSPPRG00000000666) #18	HOXB6 (ENSPPRG00000000532) #19	HOXB5 (ENSPPRG00000000333) #20	HOXB4 (ENSPPRG00000000220) #21	HOXB3 (ENSPPRG00000022415) #22	HOXB2 (ENSPPRG00000020926) #23	HOXB1 (ENSPPRG00000017656) #24	ENSPPRG00000017115	ENSPPRG00000016613	SKAP1 (ENSPPRG00000015336) #25	SNX11 (ENSPPRG00000012061) #26	CBX1 (ENSPPRG00000009475) #27	NFE2L1 (ENSPPRG00000009101) #28	COPZ2 (ENSPPRG00000006801) #29	CDK5RAP3 (ENSPPRG00000006376) #30	PNPO (ENSPPRG00000005037) #32	SP2 (ENSPPRG00000003332) #33	SP6 (ENSPPRG00000016089) #34	SCRN2 (ENSPPRG00000002730) #36	LRRC46 (ENSPPRG00000001915) #35
lion	MODERN SPECIES	14	IGF2BP1 (ENSPLOG00000021207) #9	GIP (ENSPLOG00000021311) #10	SNF8 (ENSPLOG00000021370) #11	UBE2Z (ENSPLOG00000021399) #12	ENSPLOG00000021422	CALCOCO2 (ENSPLOG00000021469) #14	TTLL6 (ENSPLOG00000021506) #15	HOXB13 (ENSPLOG00000021590) #16	ENSPLOG00000021606	HOXB9 (ENSPLOG00000021630) #17	HOXB8 (ENSPLOG00000021645)	HOXB7 (ENSPLOG00000021659) #18	HOXB6 (ENSPLOG00000021669) #19	HOXB5 (ENSPLOG00000021683) #20	HOXB4 (ENSPLOG00000021697) #21	HOXB3 (ENSPLOG00000021711) #22	HOXB2 (ENSPLOG00000021733) #23	HOXB1 (ENSPLOG00000021742) #24	ENSPLOG00000021761	SKAP1 (ENSPLOG00000021790) #25	SNX11 (ENSPLOG00000021872) #26	CBX1 (ENSPLOG00000021907) #27	NFE2L1 (ENSPLOG00000021931) #28	COPZ2 (ENSPLOG00000021972) #29	CDK5RAP3 (ENSPLOG00000022033) #30	PRR15L (ENSPLOG00000022093) #31	SP2 (ENSPLOG00000022101) #33	SP6 (ENSPLOG00000022115) #34	SCRN2 (ENSPLOG00000022130) #36	LRRC46 (ENSPLOG00000005433) #35	MRPL10 (ENSPLOG00000005459) #37
Tiger	MODERN SPECIES	43	ENSPTIG00000009967	CIR1 (ENSPTIG00000008708)	SCRN3 (ENSPTIG00000003437) ##36	GPR155 (ENSPTIG00000018965)	WIPF1 (ENSPTIG00000016801)	CHRNA1 (ENSPTIG00000012090)	CHN1 (ENSPTIG00000006887)	ATF2 (ENSPTIG00000017517)	ATP5MC3 (ENSPTIG00000016881) ##13	LNPK (ENSPTIG00000016532)	HOXD13 (ENSPTIG00000016212)	HOXD10 (ENSPTIG00000015771)	ENSPTIG00000006835	ENSPTIG00000015581	HOXD4 (ENSPTIG00000015199)	ENSPTIG00000013485 #22	MTX2 (ENSPTIG00000011503)	HNRNPA3 (ENSPTIG00000008598)	NFE2L2 (ENSPTIG00000007874) ##28
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Equus	ANCESTRAL SPECIES		ENSGT00390000006679.b #8	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Horse	MODERN SPECIES	2	B4GALNT2 (ENSECAG00000013354) #8	IGF2BP1 (ENSECAG00000009723) #9	GIP (ENSECAG00000008172) #10	ENSECAG00000046431	SNF8 (ENSECAG00000022092) #11	UBE2Z (ENSECAG00000021160) #12	ATP5MC1 (ENSECAG00000019908)	CALCOCO2 (ENSECAG00000015498) #14	ENSECAG00000059603 #15	TTLL6 (ENSECAG00000014417) #15	HOXB13 (ENSECAG00000013619) #16	HOXB9 (ENSECAG00000036001) #17	HOXB8 (ENSECAG00000034473) #18	HOXB5 (ENSECAG00000012439) #20	HOXB4 (ENSECAG00000028576) #21	HOXB3 (ENSECAG00000002707) #22	HOXB2 (ENSECAG00000012423) #23	HOXB1 (ENSECAG00000011628) #24	SKAP1 (ENSECAG00000010544) #25	SNX11 (ENSECAG00000008117) #26	CBX1 (ENSECAG00000008048) #27	NFE2L1 (ENSECAG00000007777) #28	COPZ2 (ENSECAG00000024471) #29	CDK5RAP3 (ENSECAG00000018688) #30	PRR15L (ENSECAG00000002658) #31	PNPO (ENSECAG00000014995) #32	SP2 (ENSECAG00000012859) #33	SP6 (ENSECAG00000012853) #34	SCRN2 (ENSECAG00000009826) #36	LRRC46 (ENSECAG00000007543) #35	OSBPL7 (ENSECAG00000019067)
Donkey	MODERN SPECIES	4	GIP (ENSEASG00005000385) #10	SNF8 (ENSEASG00005000402) #11	ENSEASG00005030756	UBE2Z (ENSEASG00005000404) #12	ENSEASG00005032484	ENSEASG00005026420 #14	CALCOCO2 (ENSEASG00005000430) #14	ENSEASG00005037375 #15	ENSEASG00005000438 #15	HOXB13 (ENSEASG00005025083) #16	HOXB9 (ENSEASG00005000527) #17	HOXB8 (ENSEASG00005024978)	HOXB7 (ENSEASG00005000556) #18	HOXB5 (ENSEASG00005000563) #20	HOXB6 (ENSEASG00005000560) #19	HOXB3 (ENSEASG00005000581) #22	HOXB2 (ENSEASG00005000585) #23	HOXB1 (ENSEASG00005000594) #24	SKAP1 (ENSEASG00005000601) #25	SNX11 (ENSEASG00005000605) #26	CBX1 (ENSEASG00005000607) #27	NFE2L1 (ENSEASG00005000634) #28	COPZ2 (ENSEASG00005000641) #29	CDK5RAP3 (ENSEASG00005000658) #30	PRR15L (ENSEASG00005000660) #31	PNPO (ENSEASG00005028794) #32	SP2 (ENSEASG00005000667) #33	SP6 (ENSEASG00005036407) #34	SCRN2 (ENSEASG00005000671) #36	LRRC46 (ENSEASG00005000676) #35	MRPL10 (ENSEASG00005027403) #37
Chiroptera	ANCESTRAL SPECIES	2	ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Megabat	MODERN SPECIES	334								HOXB13 (ENSPVAG00000015531) #16	ENSPVAG00000015530	HOXB8 (ENSPVAG00000015529)	HOXB7 (ENSPVAG00000015528) #18	ENSPVAG00000015526	HOXB6 (ENSPVAG00000015525) #19	HOXB5 (ENSPVAG00000015524) #20	HOXB4 (ENSPVAG00000015523) #21	HOXB3 (ENSPVAG00000015522) #22	ENSPVAG00000015521 #23	HOXB1 (ENSPVAG00000015520) #24	SKAP1 (ENSPVAG00000015519) #25	SNX11 (ENSPVAG00000015518) #26
Microchiroptera	ANCESTRAL SPECIES		ENSGT00940000160427 #9	ENSGT00390000005121 #10	ENSGT00390000007843 #11	ENSGT00940000159091 #12	ENSGT00940000159720.b	ENSGT00950000183025.a #14	ENSGT00940000161434 #15	ENSGT00940000159029 #16	ENSGT00940000161386 #17	ENSGT00940000161529	ENSGT00940000161230 #18	ENSGT00940000161108 #19	ENSGT00940000158354 #20	ENSGT00940000162072 #21	ENSGT00980000199681	ENSGT00940000159774 #22	ENSGT00940000155029.c.b #23	ENSGT00940000159503 #24	ENSGT00390000017856.b #25	ENSGT00940000160113 #26	ENSGT00940000154152.d.b #27	ENSGT00950000182892.a.b.a.a #28	ENSGT00390000004405.b #29	ENSGT00390000000713 #30	ENSGT00940000154534.a #31	ENSGT00390000011219 #32	ENSGT00940000159590 #33	ENSGT00940000161498 #34	ENSGT00390000013474.b.a #36	ENSGT00940000161315 #35	ENSGT00390000000603 #37
Greater horseshoe bat	MODERN SPECIES	13	GIP (ENSRFEG00010021740) #10	SNF8 (ENSRFEG00010021745) #11	UBE2Z (ENSRFEG00010021755) #12	ENSRFEG00010021766	CALCOCO2 (ENSRFEG00010021784) #14	ENSRFEG00010021798	TTLL6 (ENSRFEG00010021801) #15	HOXB13 (ENSRFEG00010021808) #16	HOXB9 (ENSRFEG00010021814) #17	HOXB8 (ENSRFEG00010021818)	HOXB7 (ENSRFEG00010021823) #18	HOXB6 (ENSRFEG00010021831) #19	HOXB5 (ENSRFEG00010021836) #20	HOXB4 (ENSRFEG00010021844) #21	ENSRFEG00010021849	HOXB3 (ENSRFEG00010021853) #22	HOXB2 (ENSRFEG00010021859) #23	HOXB1 (ENSRFEG00010021864) #24	SKAP1 (ENSRFEG00010021866) #25	SNX11 (ENSRFEG00010021879) #26	CBX1 (ENSRFEG00010021893) #27	NFE2L1 (ENSRFEG00010021900) #28	COPZ2 (ENSRFEG00010021918) #29	CDK5RAP3 (ENSRFEG00010021928) #30	PRR15L (ENSRFEG00010021936) #31	PNPO (ENSRFEG00010021942) #32	SP2 (ENSRFEG00010021950) #33	SP6 (ENSRFEG00010021957) #34	SCRN2 (ENSRFEG00010021961) #36	LRRC46 (ENSRFEG00010008197) #35	MRPL10 (ENSRFEG00010008230) #37
Microbat	MODERN SPECIES	1191	ENSMLUG00000024310	B4GALNT2 (ENSMLUG00000012945) #8	ENSMLUG00000016891 #9	GIP (ENSMLUG00000011785) #10	SNF8 (ENSMLUG00000011769) #11	UBE2Z (ENSMLUG00000011750) #12	ENSMLUG00000011738	CALCOCO2 (ENSMLUG00000014073) #14	TTLL6 (ENSMLUG00000014065) #15	ENSMLUG00000029480 #16	HOXB9 (ENSMLUG00000011677) #17	HOXB7 (ENSMLUG00000002609) #18	HOXB6 (ENSMLUG00000010649) #19	ENSMLUG00000014513 #20	ENSMLUG00000027291	HOXB3 (ENSMLUG00000008445) #22	HOXB1 (ENSMLUG00000008429) #24	SKAP1 (ENSMLUG00000005037) #25	SNX11 (ENSMLUG00000005033) #26	CBX1 (ENSMLUG00000005030) #27	NFE2L1 (ENSMLUG00000005024) #28	CDK5RAP3 (ENSMLUG00000005014) #30	PRR15L (ENSMLUG00000005012) #31	PNPO (ENSMLUG00000005003) #32	SP2 (ENSMLUG00000005000) #33	SCRN2 (ENSMLUG00000006417) #36	LRRC46 (ENSMLUG00000006409) #35	MRPL10 (ENSMLUG00000006405) #37	OSBPL7 (ENSMLUG00000006392)	TBX21 (ENSMLUG00000014542)	TBKBP1 (ENSMLUG00000014537)