Amniota ANCESTRAL SPECIES 37 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147 ENSGT00940000163058 ENSGT00940000163275 ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888 ENSGT00940000153886.a.a ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A ENSGT00940000153402 ENSGT00950000182966.C.b ENSGT00950000182966.C.a ENSGT00940000159445 ENSGT00940000160206 Mammalia ANCESTRAL SPECIES 55 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147 ENSGT00940000154455 ENSGT00940000153073 #34 ENSGT00940000163052 ENSGT00940000163058 ENSGT00940000163275 ENSGT01050000244869.a.b ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888 ENSGT00940000153886.a.a ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A ENSGT00940000153402 Theria ANCESTRAL SPECIES 24 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT01030000235488 ENSGT00940000163052 ENSGT00940000153073.b.b.b #34 ENSGT00940000153130.a.a.b ##35 ENSGT00940000153073.a ##34 ENSGT00940000163502 ENSGT00940000160183 #29 ENSGT00940000161790 #36 ENSGT00940000153130.a.a.a #32 ENSGT00940000163224.a ENSGT00940000162998.a ENSGT00940000163224.b.b ENSGT00940000153130.a.b #35 Eutheria ANCESTRAL SPECIES 8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00940000163906 ENSGT00940000154455.a.a ENSGT00940000154455.a.b ENSGT00940000153073.b.b.b.a #34 ENSGT00940000162998.b ENSGT00940000163052 ENSGT00940000153073.b.b.b.b ##34 ENSGT00940000163708 ENSGT00940000162524.B ENSGT00940000162840.A ##31 ENSGT00940000163717 ENSGT00940000153130.a.a.a.c.a ##35 ENSGT00940000161790 #36 Boreoeutheria ANCESTRAL SPECIES 3 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000164778 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000160183.d.a #29 ENSGT00900000140957.C ENSGT00940000162998.a ENSGT00940000153130.a.b.a.a #35 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000162840.D ##31 Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000160183.d.a #29 ENSGT00900000140957.C ENSGT00940000153130.a.b.a.a #35 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000162840.D ##31 ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000154455.a.b ENSGT00940000153073.b.b.b.a #34 ENSGT00940000161790 #36 ENSGT00940000153130.a.a.a.c.a ##35 Glires ANCESTRAL SPECIES 12 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000154455.a.b ENSGT00940000153073.b.b.b.a #34 ENSGT00940000161790 #36 ENSGT00940000153130.a.a.a.c.a ##35 Rodentia ANCESTRAL SPECIES 3 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000164778 ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000154455.a.a.g ENSGT00940000154455.a.b ENSGT00940000153073.b.b.b.a #34 ENSGT00940000161790 #36 Rodentia_A ANCESTRAL SPECIES 2 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00940000153130.a.b.b ##35 ENSGT00940000159469.a.b.a ENSGT00940000162998.b ENSGT00940000163058 ENSGT00940000163275 ENSGT01050000244869.a.b.a ENSGT01050000244869.a.b.b ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888 ENSGT00940000153886.a.a ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A Sciuridae ANCESTRAL SPECIES 8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763.j #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00940000166072 #30 ENSGT00940000162840.C #31 ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000153073.b.b.b.a.f #34 ENSGT00940000153130.a.b.a.a #35 ENSGT00940000161790 #36 ENSGT00940000153073.b.b.b.a.e ##34 ENSGT00940000153130.a.a.a.c.a ##35 ENSGT00900000140957.A.a.b ENSGT00940000160183.c ##29 ENSGT00940000163502 ENSGT00940000153130.a.a.b ##35 ENSGT00940000154455.a.a.g.b Marmotini ANCESTRAL SPECIES 15 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763.j #17 ENSGT00940000160134 #18 ENSGT00530000063506.B.o #19 ENSGT01090000260011.B.s ENSGT01090000260011.B.t ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT01080000258996 #25 ENSGT01010000223901 #26 ENSGT00550000075201 #27 ENSGT00940000160183.d.a #29 ENSGT00940000166072 #30 ENSGT00940000162840.C #31 ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000153073.b.b.b.a.f #34 ENSGT00940000153130.a.b.a.a #35 ENSGT00940000161790 #36 ENSGT00900000140957.A.a.a.c.a.a ENSGT00940000162998.b ENSGT00940000163058 Marmotini_b ANCESTRAL SPECIES 58 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763.j #17 ENSGT00940000160134 #18 ENSGT00530000063506.B.o #19 ENSGT00910000148211 #20 ENSGT01090000260011.B.s ENSGT01090000260011.B.t ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT01080000258996 #25 ENSGT01010000223901 #26 ENSGT00550000075201 #27 ENSGT00940000160183.d.a #29 ENSGT00940000166072 #30 ENSGT00940000162840.C #31 ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000153073.b.b.b.a.f #34 ENSGT00940000153130.a.b.a.a #35 ENSGT00940000161790 #36 Arctic ground squirrel MODERN SPECIES 329 CDH24 (ENSUPAG00010011199) #7 PSMB11 (ENSUPAG00010011206) #8 PSMB5 (ENSUPAG00010011210) #9 C14orf93 (ENSUPAG00010011216) #10 AJUBA (ENSUPAG00010011224) #11 HAUS4 (ENSUPAG00010011240) #12 PRMT5 (ENSUPAG00010011261) #13 RBM23 (ENSUPAG00010011269) #14 LRP10 (ENSUPAG00010011283) #15 MMP14 (ENSUPAG00010011304) #16 MRPL52 (ENSUPAG00010011316) #17 SLC7A7 (ENSUPAG00010011328) #18 ENSUPAG00010011358 #19 ENSUPAG00010011365 #20 ENSUPAG00010011367 #21 DAD1 (ENSUPAG00010011383) #22 ENSUPAG00010011393 #23 ENSUPAG00010011399 #24 ENSUPAG00010011401 #25 ENSUPAG00010011402 #26 TRDC (ENSUPAG00010011406) #27 ENSUPAG00010011410 #28 ENSUPAG00010011419 #29 ENSUPAG00010011423 #30 TRAV34 (ENSUPAG00010011430) #31 TRAV29DV5 (ENSUPAG00010011432) #32 ENSUPAG00010011436 #33 ENSUPAG00010011442 #34 ENSUPAG00010011447 #35 ENSUPAG00010011450 #36 Squirrel MODERN SPECIES 322 PSMB5 (ENSSTOG00000007134) #9 C14orf93 (ENSSTOG00000007124) #10 AJUBA (ENSSTOG00000023817) #11 HAUS4 (ENSSTOG00000020110) #12 PRMT5 (ENSSTOG00000010374) #13 RBM23 (ENSSTOG00000010354) #14 REM2 (ENSSTOG00000010340) LRP10 (ENSSTOG00000010323) #15 MMP14 (ENSSTOG00000027121) #16 MRPL52 (ENSSTOG00000010317) #17 SLC7A7 (ENSSTOG00000003328) #18 ENSSTOG00000003318 ENSSTOG00000032926 ENSSTOG00000034134 ABHD4 (ENSSTOG00000023335) #21 DAD1 (ENSSTOG00000007925) #22 TRAV29DV5 (ENSSTOG00000025427) #32 Alpin marmot MODERN SPECIES 1 AJUBA (ENSMMMG00000013718) #11 HAUS4 (ENSMMMG00000013733) #12 PRMT5 (ENSMMMG00000013742) #13 RBM23 (ENSMMMG00000013775) #14 REM2 (ENSMMMG00000013781) LRP10 (ENSMMMG00000013796) #15 MMP14 (ENSMMMG00000013801) #16 MRPL52 (ENSMMMG00000013813) #17 SLC7A7 (ENSMMMG00000013825) #18 ENSMMMG00000013841 #19 ENSMMMG00000013866 ENSMMMG00000013869 ENSMMMG00000013873 ENSMMMG00000013877 #20 ABHD4 (ENSMMMG00000013878) #21 DAD1 (ENSMMMG00000013891) #22 ENSMMMG00000013901 #23 ENSMMMG00000013930 ENSMMMG00000013935 #25 ENSMMMG00000013936 #26 TRDC (ENSMMMG00000013939) #27 ENSMMMG00000013943 ENSMMMG00000013946 ENSMMMG00000013951 ENSMMMG00000013953 TRAV34 (ENSMMMG00000013955) #31 TRAV29DV5 (ENSMMMG00000013960) #32 ENSMMMG00000013970 ##35 TRAV22 (ENSMMMG00000013973) TRAV20 (ENSMMMG00000013979) ##29 ENSMMMG00000013981 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 11 PSMB11 (ENSSVLG00005002893) #8 ENSSVLG00005002903 #9 C14orf93 (ENSSVLG00005002934) #10 AJUBA (ENSSVLG00005002965) #11 HAUS4 (ENSSVLG00005002983) #12 PRMT5 (ENSSVLG00005003037) #13 RBM23 (ENSSVLG00005003194) #14 REM2 (ENSSVLG00005003310) LRP10 (ENSSVLG00005003327) #15 MMP14 (ENSSVLG00005003350) #16 ENSSVLG00005003381 #17 SLC7A7 (ENSSVLG00005003413) #18 OXA1L (ENSSVLG00005003453) #19 ENSSVLG00005003497 ABHD4 (ENSSVLG00005003510) #21 ENSSVLG00005003529 #22 ENSSVLG00005003608 ENSSVLG00005003698 ENSSVLG00005003706 ENSSVLG00005003714 ENSSVLG00005003720 TRDV3 (ENSSVLG00005003727) ENSSVLG00005003739 ENSSVLG00005003749 TRAV36DV7 (ENSSVLG00005003757) #29 ENSSVLG00005003770 TRAV29DV5 (ENSSVLG00005003781) #32 ENSSVLG00005003795 #33 ENSSVLG00005003805 #34 ENSSVLG00005003811 ##35 ENSSVLG00005003825 Eurasian red squirrel MODERN SPECIES 2 ENSSVLG00005004846 ENSSVLG00005004866 ENSSVLG00005004896 SAA4 (ENSSVLG00005004914) ENSSVLG00005004937 SAAL1 (ENSSVLG00005004983) TPH1 (ENSSVLG00005005094) SERGEF (ENSSVLG00005005160) KCNC1 (ENSSVLG00005005188) MYOD1 (ENSSVLG00005005222) OTOG (ENSSVLG00005005330) USH1C (ENSSVLG00005005925) ABCC8 (ENSSVLG00005006593) KCNJ11 (ENSSVLG00005007700) NUCB2 (ENSSVLG00005007770) ENSSVLG00005007915 #22 PIK3C2A (ENSSVLG00005007973) ENSSVLG00005008146 PLEKHA7 (ENSSVLG00005008253) ENSSVLG00005008507 SOX6 (ENSSVLG00005008583) INSC (ENSSVLG00005008947) CALCB (ENSSVLG00005009182) CALCA (ENSSVLG00005009221) CYP2R1 (ENSSVLG00005009273) PDE3B (ENSSVLG00005009340) ENSSVLG00005009603 ENSSVLG00005009633 ENSSVLG00005009657 PSMA1 (ENSSVLG00005009698) ENSSVLG00005009821 Hystricomorpha ANCESTRAL SPECIES 15 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT01080000258996 #25 ENSGT00940000163058 ENSGT00940000163275 ENSGT01050000244869.a.b.a ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888 ENSGT00940000153886.a.a ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A ENSGT00940000153402.d ENSGT01100000263494.a.b.b.a ENSGT00400000023212 Naked mole-rat female MODERN SPECIES 11 PSMB5 (ENSHGLG00000003365) #9 PSMB11 (ENSHGLG00000020072) #8 CDH24 (ENSHGLG00000003051) #7 ENSHGLG00000018997 C14orf119 (ENSHGLG00000011980) ENSHGLG00000049606 CIROP (ENSHGLG00000035340) CEBPE (ENSHGLG00000011620) ENSHGLG00000011086 ENSHGLG00000040599 ENSHGLG00000050001 ENSHGLG00000009022 ENSHGLG00000043000 ENSHGLG00000044684 ENSHGLG00000008034 #21 DAD1 (ENSHGLG00000048015) #22 ENSHGLG00000006305 #23 ENSHGLG00000045633 #25 ENSHGLG00000034585 ENSHGLG00000041943 TRDC (ENSHGLG00000006155) #27 ENSHGLG00000048077 ENSHGLG00000048176 ENSHGLG00000047236 ENSHGLG00000034626 ##35 ENSHGLG00000036470 ##34 ENSHGLG00000035303 ENSHGLG00000042675 ENSHGLG00000035335 ENSHGLG00000032838 ENSHGLG00000046197 Hystricomorpha_a ANCESTRAL SPECIES 18 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00550000075201 #27 ENSGT00940000153073.b.b.b.b.g ##34 ENSGT00940000163275 ENSGT01050000244869.a.b.a ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888 ENSGT00940000153886.a.a ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A ENSGT00940000153402.d ENSGT01100000263494.a.b.b.a ENSGT00400000023212 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 13 CDH24 (ENSCPOG00000013121) #7 PSMB11 (ENSCPOG00000014048) #8 PSMB5 (ENSCPOG00000014047) #9 C14orf93 (ENSCPOG00000014044) #10 AJUBA (ENSCPOG00000023158) #11 HAUS4 (ENSCPOG00000003331) #12 PRMT5 (ENSCPOG00000014038) #13 REM2 (ENSCPOG00000024124) LRP10 (ENSCPOG00000014495) #15 MMP14 (ENSCPOG00000024551) #16 MRPL52 (ENSCPOG00000009474) #17 SLC7A7 (ENSCPOG00000005730) #18 OXA1L (ENSCPOG00000022098) #19 ENSCPOG00000032843 ABHD4 (ENSCPOG00000000850) #21 ENSCPOG00000031141 #22 ENSCPOG00000034500 #23 TRDC (ENSCPOG00000000844) #27 ENSCPOG00000033000 ##34 ENSCPOG00000040263 ##34 OR4E2 (ENSCPOG00000026054) OR10G2 (ENSCPOG00000039240) SALL2 (ENSCPOG00000040220) METTL3 (ENSCPOG00000002545) TOX4 (ENSCPOG00000025504) RAB2B (ENSCPOG00000026575) CHD8 (ENSCPOG00000002538) SUPT16H (ENSCPOG00000002534) RPGRIP1 (ENSCPOG00000002526) ENSCPOG00000001474 ENSCPOG00000035385 Guinea pig MODERN SPECIES 81 KIF3A (ENSCPOG00000011249) ENSCPOG00000031420 IL13 (ENSCPOG00000027078) RAD50 (ENSCPOG00000002226) IL5 (ENSCPOG00000004840) IRF1 (ENSCPOG00000004848) SLC22A5 (ENSCPOG00000005459) SLC22A4 (ENSCPOG00000004913) PDLIM4 (ENSCPOG00000027520) P4HA2 (ENSCPOG00000008411) CSF2 (ENSCPOG00000014074) ACSL6 (ENSCPOG00000012748) FNIP1 (ENSCPOG00000030775) RAPGEF6 (ENSCPOG00000010242) CDC42SE2 (ENSCPOG00000039035) ENSCPOG00000000849 #22 LYRM7 (ENSCPOG00000039454) HINT1 (ENSCPOG00000023046) GPX3 (ENSCPOG00000006611) TNIP1 (ENSCPOG00000006613) ANXA6 (ENSCPOG00000005272) CCDC69 (ENSCPOG00000031762) GM2A (ENSCPOG00000040130) SLC36A3 (ENSCPOG00000009677) SLC36A2 (ENSCPOG00000008306) ENSCPOG00000034918 ENSCPOG00000036108 ENSCPOG00000030030 ENSCPOG00000037129 ENSCPOG00000039847 ENSCPOG00000037647 Hystricomorpha_b ANCESTRAL SPECIES 18 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00550000075201 #27 ENSGT00940000153073.b.b.b.b.g ##34 Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 317 ENSODEG00000001783 PSMB5 (ENSODEG00000001779) #9 C14orf93 (ENSODEG00000001756) #10 ENSODEG00000001742 #11 HAUS4 (ENSODEG00000001722) #12 PRMT5 (ENSODEG00000001672) #13 REM2 (ENSODEG00000001644) LRP10 (ENSODEG00000001621) #15 MMP14 (ENSODEG00000001611) #16 MRPL52 (ENSODEG00000001600) #17 SLC7A7 (ENSODEG00000001562) #18 OXA1L (ENSODEG00000001527) #19 ENSODEG00000018736 ENSODEG00000001719 ABHD4 (ENSODEG00000001709) #21 ENSODEG00000001700 #22 ENSODEG00000001687 Degu MODERN SPECIES 96 ENSODEG00000009729 GRIPAP1 (ENSODEG00000009943) KCND1 (ENSODEG00000010342) OTUD5 (ENSODEG00000009050) PIM2 (ENSODEG00000009339) SLC35A2 (ENSODEG00000009076) ENSODEG00000008988 TIMM17B (ENSODEG00000010704) PCSK1N (ENSODEG00000010528) ENSODEG00000009461 GATA1 (ENSODEG00000008814) ENSODEG00000011241 #22 ENSODEG00000009872 SUV39H1 (ENSODEG00000010079) WAS (ENSODEG00000009320) ENSODEG00000009972 WDR13 (ENSODEG00000009758) ENSODEG00000009372 ENSODEG00000019740 TBC1D25 (ENSODEG00000009376) ENSODEG00000009371 PORCN (ENSODEG00000008780) FTSJ1 (ENSODEG00000009855) ENSODEG00000019635 ENSODEG00000009360 ENSODEG00000009058 ZNF182 (ENSODEG00000010486) Degu MODERN SPECIES 180 ENSODEG00000000558 LRRN3 (ENSODEG00000018623) ENSODEG00000000581 ENSODEG00000018617 DNAJB9 (ENSODEG00000000633) THAP5 (ENSODEG00000000636) LRIG3 (ENSODEG00000000740) ENSODEG00000000788 ENSODEG00000018604 #22 TAFA2 (ENSODEG00000000831) ENSODEG00000001323 USP15 (ENSODEG00000001379) MON2 (ENSODEG00000001456) PPM1H (ENSODEG00000001605) ENSODEG00000018680 ENSODEG00000018759 ENSODEG00000018696 ENSODEG00000001649 ENSODEG00000001660 AVPR1A (ENSODEG00000001671) Long-tailed chinchilla MODERN SPECIES 116 CDH24 (ENSCLAG00000011914) #7 PSMB11 (ENSCLAG00000010224) #8 PSMB5 (ENSCLAG00000011138) #9 C14orf93 (ENSCLAG00000010663) #10 AJUBA (ENSCLAG00000011137) #11 HAUS4 (ENSCLAG00000013026) #12 PRMT5 (ENSCLAG00000010579) #13 REM2 (ENSCLAG00000011939) LRP10 (ENSCLAG00000010502) #15 MMP14 (ENSCLAG00000009784) #16 MRPL52 (ENSCLAG00000010931) #17 SLC7A7 (ENSCLAG00000011517) #18 OXA1L (ENSCLAG00000009417) #19 ENSCLAG00000009926 ABHD4 (ENSCLAG00000012500) #21 DAD1 (ENSCLAG00000011874) #22 ENSCLAG00000012044 #23 TRDC (ENSCLAG00000010037) #27 ENSCLAG00000010144 ##34 Rodentia_B ANCESTRAL SPECIES 7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000164778 ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000154455.a.b ENSGT00940000153073.b.b.b.a #34 ENSGT00940000161790 #36 ENSGT00940000153130.a.a.a.c.a ##35 Myomorpha ANCESTRAL SPECIES 7 ENSGT00710000106790 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000164778 ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000154455.a.b ENSGT00940000153073.b.b.b.a #34 ENSGT00940000161790 #36 ENSGT00940000153130.a.a.a.c.a ##35 Muroidea ANCESTRAL SPECIES 36 ENSGT00710000106790 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000164778 ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000154455.a.b ENSGT00940000153073.b.b.b.a #34 ENSGT00940000161790 #36 ENSGT00940000153130.a.a.a.c.a ##35 Muroidea_A ANCESTRAL SPECIES 10 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000164778 ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000153073.b.b.b.a.h #34 ENSGT00900000140957.A.a.b ENSGT00940000163502 ENSGT00940000153130.a.a.b.f.b.a.b ##35 Cricetidae ANCESTRAL SPECIES 15 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT01020000232693 ENSGT00940000163058 ENSGT00940000163275 ENSGT01050000244869.a.b.a.p ENSGT01050000244869.a.b.a.o ENSGT01050000244869.a.b.b ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888 ENSGT00940000153886.a.a ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A ENSGT00940000153402.d.r.b Cricetinae ANCESTRAL SPECIES 18 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 3 Psmb11 (ENSCGRG00001002129) #8 Psmb5 (ENSCGRG00001016436) #9 4931414P19Rik (ENSCGRG00001001465) #10 Ajuba (ENSCGRG00001014156) #11 ENSCGRG00001005166 Haus4 (ENSCGRG00001024703) #12 Prmt5 (ENSCGRG00001014293) #13 Rem2 (ENSCGRG00001003504) Lrp10 (ENSCGRG00001009012) #15 Mmp14 (ENSCGRG00001015766) #16 Mrpl52 (ENSCGRG00001009095) #17 Slc7a7 (ENSCGRG00001021388) #18 Oxa1l (ENSCGRG00001023578) #19 Or6e1 (ENSCGRG00001005325) Abhd4 (ENSCGRG00001022057) #21 ENSCGRG00001018967 #22 Chinese hamster chok1gshd MODERN SPECIES 2 ENSCGRG00001007634 Fancm (ENSCGRG00001023573) ENSCGRG00001020987 Prpf39 (ENSCGRG00001022389) Togaram1 (ENSCGRG00001020874) Klhl28 (ENSCGRG00001022249) Gm527 (ENSCGRG00001022771) ENSCGRG00001023445 ENSCGRG00001003341 ENSCGRG00001006380 ENSCGRG00001011106 ENSCGRG00001009504 ENSCGRG00001010478 Lrfn5 (ENSCGRG00001012425) ENSCGRG00001010233 ENSCGRG00001013073 #22 ENSCGRG00001021012 Fbxo33 (ENSCGRG00001023018) ENSCGRG00001001417 ENSCGRG00001015024 Pnn (ENSCGRG00001015998) Trappc6b (ENSCGRG00001016994) Gemin2 (ENSCGRG00001017720) Sec23a (ENSCGRG00001019639) ENSCGRG00001002230 ENSCGRG00001003851 Clec14a (ENSCGRG00001008667) Sstr1 (ENSCGRG00001011700) Ttc6 (ENSCGRG00001002787) ENSCGRG00001006180 Foxa1 (ENSCGRG00001007733) Golden Hamster MODERN SPECIES 811 Slc7a8 (ENSMAUG00000019384) Acin1 (ENSMAUG00000000504) ENSMAUG00000012369 Cdh24 (ENSMAUG00000021615) #7 Psmb11 (ENSMAUG00000017123) #8 ENSMAUG00000014813 ENSMAUG00000017591 #9 4931414P19Rik (ENSMAUG00000013152) #10 Ajuba (ENSMAUG00000014919) #11 Rem2 (ENSMAUG00000021314) Lrp10 (ENSMAUG00000013461) #15 Mmp14 (ENSMAUG00000018577) #16 Mrpl52 (ENSMAUG00000000585) #17 Slc7a7 (ENSMAUG00000005323) #18 Oxa1l (ENSMAUG00000005100) #19 Dad1 (ENSMAUG00000001827) #22 Cricetidae_B ANCESTRAL SPECIES 11 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT01020000232693 ENSGT00940000163058 ENSGT00940000163275 ENSGT01050000244869.a.b.a.p ENSGT01050000244869.a.b.a.o ENSGT01050000244869.a.b.b ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888 ENSGT00940000153886.a.a ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A ENSGT00940000153402.d.r.b Northern American deer mouse MODERN SPECIES 22 Cdh24 (ENSPEMG00000018892) #7 Psmb11 (ENSPEMG00000026627) #8 Psmb5 (ENSPEMG00000019276) #9 4931414P19Rik (ENSPEMG00000015496) #10 Ajuba (ENSPEMG00000019210) #11 Haus4 (ENSPEMG00000016122) #12 Prmt5 (ENSPEMG00000017614) #13 Rem2 (ENSPEMG00000011668) Lrp10 (ENSPEMG00000013768) #15 Mmp14 (ENSPEMG00000014840) #16 Mrpl52 (ENSPEMG00000010147) #17 Slc7a7 (ENSPEMG00000016955) #18 Oxa1l (ENSPEMG00000016711) #19 Or6e1 (ENSPEMG00000004435) Abhd4 (ENSPEMG00000003226) #21 Dad1 (ENSPEMG00000009539) #22 Trac (ENSPEMG00000025944) #23 ENSPEMG00000028259 ENSPEMG00000028337 ENSPEMG00000029710 ENSPEMG00000025126 #27 ENSPEMG00000024488 ##31 Trav21-dv12 (ENSPEMG00000026566) Trav19 (ENSPEMG00000029181) #32 ENSPEMG00000029205 #33 Trav17 (ENSPEMG00000029744) #34 ENSPEMG00000030702 ENSPEMG00000027996 #36 ENSPEMG00000031273 ENSPEMG00000025072 ##35 ENSPEMG00000029560 ##35 Prairie vole MODERN SPECIES 163 ENSMOCG00000015141 #9 4931414P19Rik (ENSMOCG00000012978) #10 Ajuba (ENSMOCG00000014127) #11 Haus4 (ENSMOCG00000005352) #12 Prmt5 (ENSMOCG00000017320) #13 Rem2 (ENSMOCG00000000581) Lrp10 (ENSMOCG00000006687) #15 Mmp14 (ENSMOCG00000006065) #16 ENSMOCG00000016920 #17 Slc7a7 (ENSMOCG00000000960) #18 Oxa1l (ENSMOCG00000013102) #19 ENSMOCG00000005060 Or6e1 (ENSMOCG00000003935) ENSMOCG00000001745 Abhd4 (ENSMOCG00000021742) #21 Dad1 (ENSMOCG00000020248) #22 Murinae ANCESTRAL SPECIES 16 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000164778 ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000153073.b.b.b.a.h #34 ENSGT00940000161790.i #36 ENSGT00900000140957.A.a.b ENSGT00940000161790.j #36 Mus ANCESTRAL SPECIES 8 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00860000135794 ENSGT00950000186557 ENSGT00860000136119 ENSGT00950000186467 ENSGT00950000186478 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000163224.b.b Mus_A ANCESTRAL SPECIES 12 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00860000135636 ENSGT00860000135984 ENSGT00860000135941 ENSGT00950000186533 ENSGT00860000135743 ENSGT00950000186527 ENSGT00950000186517 ENSGT00950000186473 ENSGT00950000186498 ENSGT00950000186489 ENSGT00950000186528 ENSGT00860000136090 ENSGT00860000136200 ENSGT00860000135673 Ryukyu mouse MODERN SPECIES 5 Cdh24 (MGP_CAROLIEiJ_G0019264) #7 Psmb11 (MGP_CAROLIEiJ_G0019263) #8 Psmb5 (MGP_CAROLIEiJ_G0019262) #9 4931414P19Rik (MGP_CAROLIEiJ_G0019261) #10 Ajuba (MGP_CAROLIEiJ_G0019260) #11 Haus4 (MGP_CAROLIEiJ_G0019259) #12 Prmt5 (MGP_CAROLIEiJ_G0019258) #13 Rem2 (MGP_CAROLIEiJ_G0019257) Lrp10 (MGP_CAROLIEiJ_G0019256) #15 Mmp14 (MGP_CAROLIEiJ_G0019255) #16 Mrpl52 (MGP_CAROLIEiJ_G0019254) #17 Slc7a7 (MGP_CAROLIEiJ_G0019253) #18 Oxa1l (MGP_CAROLIEiJ_G0019252) #19 Or6e1 (MGP_CAROLIEiJ_G0019251) Abhd4 (MGP_CAROLIEiJ_G0019250) #21 Dad1 (MGP_CAROLIEiJ_G0019249) #22 Trac (MGP_CAROLIEiJ_G0002120) #23 Traj2 (MGP_CAROLIEiJ_G0002178) Traj3 (MGP_CAROLIEiJ_G0002177) Traj4 (MGP_CAROLIEiJ_G0002176) Traj5 (MGP_CAROLIEiJ_G0002175) Traj6 (MGP_CAROLIEiJ_G0002174) Traj7 (MGP_CAROLIEiJ_G0002173) Traj9 (MGP_CAROLIEiJ_G0002172) Traj11 (MGP_CAROLIEiJ_G0002171) MGP_CAROLIEiJ_G0002170 Traj13 (MGP_CAROLIEiJ_G0002169) Traj15 (MGP_CAROLIEiJ_G0002168) Traj16 (MGP_CAROLIEiJ_G0002167) Traj17 (MGP_CAROLIEiJ_G0002166) Traj18 (MGP_CAROLIEiJ_G0002165) Mus_B ANCESTRAL SPECIES 11 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00860000135636 ENSGT00860000135984 ENSGT00860000135941 ENSGT00950000186533 ENSGT00860000135743 ENSGT00950000186527 ENSGT00950000186517 ENSGT00950000186473 ENSGT00950000186498 ENSGT00950000186489 ENSGT00950000186528 ENSGT00860000136090 ENSGT00860000136200 ENSGT00860000135673 Mouse MODERN SPECIES 5 Cdh24 (ENSMUSG00000059674) #7 Psmb11 (ENSMUSG00000072423) #8 Psmb5 (ENSMUSG00000022193) #9 4931414P19Rik (ENSMUSG00000022179) #10 Ajuba (ENSMUSG00000022178) #11 Haus4 (ENSMUSG00000022177) #12 Prmt5 (ENSMUSG00000023110) #13 Rem2 (ENSMUSG00000022176) Lrp10 (ENSMUSG00000022175) #15 Mmp14 (ENSMUSG00000000957) #16 Mrpl52 (ENSMUSG00000010406) #17 Slc7a7 (ENSMUSG00000000958) #18 Oxa1l (ENSMUSG00000000959) #19 Or6e1 (ENSMUSG00000048153) Abhd4 (ENSMUSG00000040997) #21 Dad1 (ENSMUSG00000022174) #22 Trac (ENSMUSG00000076928) #23 Traj2 (ENSMUSG00000076926) Traj3 (ENSMUSG00000076925) Traj4 (ENSMUSG00000076924) Traj5 (ENSMUSG00000076923) Traj6 (ENSMUSG00000076922) Traj7 (ENSMUSG00000076921) Traj9 (ENSMUSG00000076919) Traj11 (ENSMUSG00000076918) Traj12 (ENSMUSG00000076917) Traj13 (ENSMUSG00000076916) Traj15 (ENSMUSG00000076914) Traj16 (ENSMUSG00000076913) Traj17 (ENSMUSG00000076912) Traj18 (ENSMUSG00000076911) Mus_C ANCESTRAL SPECIES 20 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00860000135636 ENSGT00860000135984 ENSGT00860000135941 ENSGT00950000186533 ENSGT00860000135743 ENSGT00950000186527 ENSGT00950000186517 ENSGT00950000186473 ENSGT00950000186498 ENSGT00950000186489 ENSGT00950000186528 ENSGT00860000136090 ENSGT00860000136200 ENSGT00860000135673 Steppe mouse MODERN SPECIES 2984 Psmb11 (ENSMSIG00000016415) #8 Psmb5 (ENSMSIG00000016401) #9 4931414P19Rik (ENSMSIG00000016385) #10 Ajuba (ENSMSIG00000016353) #11 Haus4 (ENSMSIG00000016328) #12 Prmt5 (ENSMSIG00000016312) #13 Rem2 (ENSMSIG00000016298) Lrp10 (ENSMSIG00000016275) #15 Mmp14 (ENSMSIG00000016218) #16 ENSMSIG00000016189 #17 Slc7a7 (ENSMSIG00000016170) #18 Oxa1l (ENSMSIG00000016147) #19 Or6e1 (ENSMSIG00000016138) ENSMSIG00000016133 #20 Abhd4 (ENSMSIG00000016112) #21 Dad1 (ENSMSIG00000016087) #22 Trac (ENSMSIG00000016077) #23 ENSMSIG00000016075 Trdc (ENSMSIG00000016073) #27 ENSMSIG00000016066 ENSMSIG00000016053 ENSMSIG00000016039 #30 ENSMSIG00000016011 spretus MODERN SPECIES 5 Cdh24 (MGP_SPRETEiJ_G0020154) #7 Psmb11 (MGP_SPRETEiJ_G0020153) #8 Psmb5 (MGP_SPRETEiJ_G0020152) #9 4931414P19Rik (MGP_SPRETEiJ_G0020151) #10 Ajuba (MGP_SPRETEiJ_G0020150) #11 Haus4 (MGP_SPRETEiJ_G0020149) #12 Prmt5 (MGP_SPRETEiJ_G0020148) #13 Rem2 (MGP_SPRETEiJ_G0020147) Lrp10 (MGP_SPRETEiJ_G0020146) #15 Mmp14 (MGP_SPRETEiJ_G0020145) #16 Mrpl52 (MGP_SPRETEiJ_G0020144) #17 Slc7a7 (MGP_SPRETEiJ_G0020143) #18 Oxa1l (MGP_SPRETEiJ_G0020142) #19 Or6e1 (MGP_SPRETEiJ_G0020141) Abhd4 (MGP_SPRETEiJ_G0020140) #21 Dad1 (MGP_SPRETEiJ_G0020139) #22 Trac (MGP_SPRETEiJ_G0002246) #23 Traj2 (MGP_SPRETEiJ_G0002307) Traj3 (MGP_SPRETEiJ_G0002306) Traj4 (MGP_SPRETEiJ_G0002305) Traj5 (MGP_SPRETEiJ_G0002304) Traj6 (MGP_SPRETEiJ_G0002303) Traj7 (MGP_SPRETEiJ_G0002302) Traj9 (MGP_SPRETEiJ_G0002301) Traj11 (MGP_SPRETEiJ_G0002300) Traj12 (MGP_SPRETEiJ_G0002299) Traj13 (MGP_SPRETEiJ_G0002298) Traj15 (MGP_SPRETEiJ_G0002297) Traj16 (MGP_SPRETEiJ_G0002296) Traj17 (MGP_SPRETEiJ_G0002295) Traj18 (MGP_SPRETEiJ_G0002294) Shrew mouse MODERN SPECIES 21 Cdh24 (MGP_PahariEiJ_G0030283) #7 Psmb11 (MGP_PahariEiJ_G0030282) #8 Psmb5 (MGP_PahariEiJ_G0030281) #9 4931414P19Rik (MGP_PahariEiJ_G0030280) #10 Ajuba (MGP_PahariEiJ_G0030279) #11 Haus4 (MGP_PahariEiJ_G0030278) #12 Prmt5 (MGP_PahariEiJ_G0030277) #13 Rem2 (MGP_PahariEiJ_G0030276) Lrp10 (MGP_PahariEiJ_G0030275) #15 Mmp14 (MGP_PahariEiJ_G0030274) #16 Mrpl52 (MGP_PahariEiJ_G0030273) #17 MGP_PahariEiJ_G0030272 #18 Oxa1l (MGP_PahariEiJ_G0030271) #19 Or6e1 (MGP_PahariEiJ_G0030270) Abhd4 (MGP_PahariEiJ_G0030269) #21 Dad1 (MGP_PahariEiJ_G0030268) #22 Trac (MGP_PahariEiJ_G0001958) #23 Traj2 (MGP_PahariEiJ_G0002028) Traj3 (MGP_PahariEiJ_G0002027) Traj4 (MGP_PahariEiJ_G0002026) Traj5 (MGP_PahariEiJ_G0002025) Traj6 (MGP_PahariEiJ_G0002024) MGP_PahariEiJ_G0002023 MGP_PahariEiJ_G0002022 Traj11 (MGP_PahariEiJ_G0002021) Traj12 (MGP_PahariEiJ_G0002020) Traj13 (MGP_PahariEiJ_G0002019) Traj15 (MGP_PahariEiJ_G0002018) Traj16 (MGP_PahariEiJ_G0002017) Traj17 (MGP_PahariEiJ_G0002016) Traj18 (MGP_PahariEiJ_G0002015) Rat MODERN SPECIES 6 Acin1 (ENSRNOG00000013533) Gm17606 (ENSRNOG00000065567) Cdh24 (ENSRNOG00000013503) #7 Psmb5 (ENSRNOG00000013386) #9 RGD1565222 (ENSRNOG00000013317) #10 Ajuba (ENSRNOG00000012791) #11 Haus4 (ENSRNOG00000039284) #12 Prmt5 (ENSRNOG00000012046) #13 Rem2 (ENSRNOG00000011646) Lrp10 (ENSRNOG00000011592) #15 Mmp14 (ENSRNOG00000010947) #16 Slc7a7 (ENSRNOG00000010296) #18 Oxa1l (ENSRNOG00000009713) #19 Or6e1 (ENSRNOG00000068252) Abhd4 (ENSRNOG00000009244) #21 Dad1 (ENSRNOG00000009090) #22 ENSRNOG00000070834 ENSRNOG00000067178 AC097037.1 (ENSRNOG00000033109) ENSRNOG00000065679 #27 ENSRNOG00000066946 ENSRNOG00000065420 #30 LOC108353026 (ENSRNOG00000068621) #31 Trav21-dv12 (ENSRNOG00000065401) ENSRNOG00000065769 #32 LOC120096971 (ENSRNOG00000042103) ENSRNOG00000066538 ##35 ENSRNOG00000065085 AABR07017902.1 (ENSRNOG00000009074) #23 ENSRNOG00000064043 AABR07017868.4 (ENSRNOG00000056892) ##35 Upper Galilee mountains blind mole rat MODERN SPECIES 1079 ENSNGAG00000020569 Cdh24 (ENSNGAG00000010716) #7 Psmb5 (ENSNGAG00000014706) #9 ENSNGAG00000017377 4931414P19Rik (ENSNGAG00000018515) #10 ENSNGAG00000020767 #11 Haus4 (ENSNGAG00000001010) #12 Prmt5 (ENSNGAG00000004212) #13 Rem2 (ENSNGAG00000010180) Lrp10 (ENSNGAG00000001455) #15 Mmp14 (ENSNGAG00000011134) #16 Mrpl52 (ENSNGAG00000011028) #17 Slc7a7 (ENSNGAG00000014120) #18 Oxa1l (ENSNGAG00000015527) #19 Abhd4 (ENSNGAG00000019786) #21 Dad1 (ENSNGAG00000002448) #22 Kangaroo rat MODERN SPECIES 403 ENSDORG00000010574 Cdh24 (ENSDORG00000010568) #7 Psmb11 (ENSDORG00000010567) #8 Psmb5 (ENSDORG00000024250) #9 ENSDORG00000010563 #9 4931414P19Rik (ENSDORG00000004064) #10 ENSDORG00000023447 #11 Prmt5 (ENSDORG00000004929) #13 ENSDORG00000004926 #14 Rem2 (ENSDORG00000004924) Lrp10 (ENSDORG00000004922) #15 Mmp14 (ENSDORG00000000144) #16 Slc7a7 (ENSDORG00000011331) #18 Or6e1 (ENSDORG00000028076) Abhd4 (ENSDORG00000008204) #21 Dad1 (ENSDORG00000008173) #22 ENSDORG00000025415 ENSDORG00000026434 Lagomorpha ANCESTRAL SPECIES 14 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT01060000252029 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000153130.a.b.b ##35 ENSGT00950000184977 ENSGT00940000163717 ENSGT00940000153130.a.a.a.c.a ##35 ENSGT00940000153073.b.b.b.b ##34 ENSGT00940000153073.a ##34 ENSGT00940000163502 ENSGT00940000159469.a.b.a Rabbit MODERN SPECIES 8 PSMB11 (ENSOCUG00000013112) #8 PSMB5 (ENSOCUG00000013109) #9 C14orf93 (ENSOCUG00000013097) #10 ENSOCUG00000001058 #11 HAUS4 (ENSOCUG00000013088) #12 PRMT5 (ENSOCUG00000002013) #13 RBM23 (ENSOCUG00000002006) #14 ENSOCUG00000001255 LRP10 (ENSOCUG00000016380) #15 MRPL52 (ENSOCUG00000010240) #17 SLC7A7 (ENSOCUG00000000724) #18 OXA1L (ENSOCUG00000000720) #19 ENSOCUG00000026780 ENSOCUG00000021544 ABHD4 (ENSOCUG00000014277) #21 DAD1 (ENSOCUG00000014269) #22 ENSOCUG00000014258 #23 ENSOCUG00000036041 ENSOCUG00000030264 ENSOCUG00000036453 ENSOCUG00000036554 ENSOCUG00000035549 ENSOCUG00000032804 TRDV3 (ENSOCUG00000025591) ENSOCUG00000014250 #27 ENSOCUG00000033175 ENSOCUG00000039364 ENSOCUG00000024472 ENSOCUG00000023049 ENSOCUG00000038654 ##35 TRAV26-2 (ENSOCUG00000032620) Pika MODERN SPECIES 990 C14orf93 (ENSOPRG00000001155) #10 HAUS4 (ENSOPRG00000001137) #12 PRMT5 (ENSOPRG00000001113) #13 RBM23 (ENSOPRG00000001092) #14 REM2 (ENSOPRG00000001065) LRP10 (ENSOPRG00000001050) #15 MMP14 (ENSOPRG00000001031) #16 MRPL52 (ENSOPRG00000001021) #17 SLC7A7 (ENSOPRG00000001007) #18 OXA1L (ENSOPRG00000000988) #19 ABHD4 (ENSOPRG00000000973) #21 DAD1 (ENSOPRG00000000950) #22 Tree shrew MODERN SPECIES 1270 DAD1 (ENSTBEG00000009680) #22 ENSTBEG00000017526 ENSTBEG00000017339 #36 Primates ANCESTRAL SPECIES 2 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT01080000258109 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000160183.d.a #29 ENSGT00900000140957.C ENSGT00940000153130.a.b.a.a #35 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000162998.a Strepsirrhini ANCESTRAL SPECIES 2 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00550000075201 #27 ENSGT00940000160147.a.p ENSGT00940000160183.d.a #29 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000161790 #36 ENSGT00940000153130.a.a.a.c.a ##35 ENSGT00900000140957.A.a.b ENSGT00940000163708 ENSGT00940000153073.a ##34 ENSGT00940000163052 ENSGT00940000163502 ENSGT00940000153073.b.b.b.b ##34 ENSGT00940000153130.a.a.b ##35 Lemuriformes ANCESTRAL SPECIES 8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00940000160147.a.p ENSGT00940000160183.d.a #29 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000161790 #36 ENSGT00940000153130.a.a.a.c.a ##35 ENSGT00900000140957.A.a.b ENSGT00940000163708 ENSGT00940000163052 ENSGT00940000153073.a ##34 ENSGT00940000163507 ENSGT00900000140957.A.a.a ENSGT00940000153073.b.b.b.a.d.a #34 ENSGT00940000153073.b.b.b.b ##34 Lemuriformes_a ANCESTRAL SPECIES 1 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00940000163507 ENSGT00900000140957.A.a.a ENSGT00940000153073.b.b.b.a.d.a #34 ENSGT00940000153073.b.b.b.b ##34 ENSGT00940000153130.a.a.b ##35 ENSGT00940000154455.a.a ENSGT00940000154455.a.b ENSGT00940000153073.b.b.b.a.c #34 ENSGT00940000162998.b ENSGT00940000153073.b.b.a ##34 ENSGT00740000116858 ENSGT00940000163058 ENSGT00940000163275 ENSGT01050000244869.a.b.a Coquerels sifaka MODERN SPECIES 424 CDH24 (ENSPCOG00000003143) #7 PSMB5 (ENSPCOG00000021862) #9 C14orf93 (ENSPCOG00000010379) #10 AJUBA (ENSPCOG00000016135) #11 HAUS4 (ENSPCOG00000016850) #12 PRMT5 (ENSPCOG00000017358) #13 RBM23 (ENSPCOG00000018564) #14 REM2 (ENSPCOG00000025110) LRP10 (ENSPCOG00000020765) #15 MMP14 (ENSPCOG00000020895) #16 MRPL52 (ENSPCOG00000027612) #17 SLC7A7 (ENSPCOG00000015863) #18 OXA1L (ENSPCOG00000024151) #19 ENSPCOG00000012865 ABHD4 (ENSPCOG00000000567) #21 DAD1 (ENSPCOG00000012877) #22 ENSPCOG00000015924 TRAV18 (ENSPCOG00000013294) TRAV9-1 (ENSPCOG00000009429) TRAV8-3 (ENSPCOG00000013652) #34 TRAV3 (ENSPCOG00000013386) ##34 TRAV2 (ENSPCOG00000013662) OR10G2 (ENSPCOG00000008398) SALL2 (ENSPCOG00000017266) METTL3 (ENSPCOG00000024390) TOX4 (ENSPCOG00000021038) ENSPCOG00000026999 CHD8 (ENSPCOG00000014628) SUPT16H (ENSPCOG00000006812) RPGRIP1 (ENSPCOG00000024495) ENSPCOG00000022866 Greater bamboo lemur MODERN SPECIES 751 PSMB5 (ENSPSMG00000006294) #9 C14orf93 (ENSPSMG00000006267) #10 AJUBA (ENSPSMG00000006254) #11 HAUS4 (ENSPSMG00000006188) #12 PRMT5 (ENSPSMG00000005651) #13 RBM23 (ENSPSMG00000005248) #14 REM2 (ENSPSMG00000005112) LRP10 (ENSPSMG00000005091) #15 MMP14 (ENSPSMG00000005056) #16 MRPL52 (ENSPSMG00000005045) #17 SLC7A7 (ENSPSMG00000005010) #18 OXA1L (ENSPSMG00000004934) #19 ENSPSMG00000004892 OR6J1 (ENSPSMG00000004890) ABHD4 (ENSPSMG00000004876) #21 DAD1 (ENSPSMG00000004854) #22 ENSPSMG00000004844 ENSPSMG00000004832 ENSPSMG00000004823 ENSPSMG00000004818 ENSPSMG00000004812 ENSPSMG00000004804 ENSPSMG00000004793 ENSPSMG00000004788 ENSPSMG00000004776 ENSPSMG00000004774 ENSPSMG00000004769 Mouse lemur MODERN SPECIES 22 CDH24 (ENSMICG00000002564) #7 PSMB5 (ENSMICG00000035988) #9 C14orf93 (ENSMICG00000009205) #10 AJUBA (ENSMICG00000009193) #11 HAUS4 (ENSMICG00000030177) #12 PRMT5 (ENSMICG00000015023) #13 RBM23 (ENSMICG00000006364) #14 REM2 (ENSMICG00000047327) LRP10 (ENSMICG00000006358) #15 MMP14 (ENSMICG00000006204) #16 MRPL52 (ENSMICG00000006201) #17 SLC7A7 (ENSMICG00000036164) #18 OXA1L (ENSMICG00000001403) #19 ENSMICG00000028761 ABHD4 (ENSMICG00000012697) #21 DAD1 (ENSMICG00000012690) #22 ENSMICG00000045157 TRAV34 (ENSMICG00000047656) #31 ENSMICG00000048028 ##34 TRAV21 (ENSMICG00000042869) ENSMICG00000036456 TRAV9-2 (ENSMICG00000047919) ENSMICG00000044028 #34 TRAV9-1 (ENSMICG00000045305) ENSMICG00000026679 #34 TRAV3 (ENSMICG00000041451) ##34 OR10G3 (ENSMICG00000045513) SALL2 (ENSMICG00000046438) METTL3 (ENSMICG00000015037) TOX4 (ENSMICG00000014965) RAB2B (ENSMICG00000014937) Bushbaby MODERN SPECIES 340 PSMB11 (ENSOGAG00000034070) #8 PSMB5 (ENSOGAG00000005107) #9 C14orf93 (ENSOGAG00000005106) #10 AJUBA (ENSOGAG00000034052) #11 HAUS4 (ENSOGAG00000000586) #12 PRMT5 (ENSOGAG00000005094) #13 RBM23 (ENSOGAG00000014794) #14 REM2 (ENSOGAG00000027026) LRP10 (ENSOGAG00000005090) #15 MMP14 (ENSOGAG00000012736) #16 SLC7A7 (ENSOGAG00000000632) #18 OXA1L (ENSOGAG00000000631) #19 ENSOGAG00000024512 OR6J1 (ENSOGAG00000006226) ABHD4 (ENSOGAG00000006223) #21 DAD1 (ENSOGAG00000006219) #22 TRAC (ENSOGAG00000027202) TRDC (ENSOGAG00000006210) #27 ENSOGAG00000029709 Haplorrhini ANCESTRAL SPECIES 12 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT01100000264510 ENSGT01070000257199 Simiiformes ANCESTRAL SPECIES 2 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00900000140957.B ENSGT00920000149497 ENSGT00940000163224.a ENSGT00940000160147.a.n ENSGT00940000160147.a.m ENSGT00940000160183.d.a #29 ENSGT00900000140957.C ENSGT00940000153130.a.b.a.a #35 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000162840.D ##31 Catarrhini ANCESTRAL SPECIES 9 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00900000140957.B ENSGT00920000149497 ENSGT00940000163224.a ENSGT00940000160147.a.n ENSGT00940000160147.a.m ENSGT00940000160183.d.a #29 ENSGT00900000140957.C ENSGT00940000153130.a.b.a.a #35 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000162840.D ##31 Hominoidea ANCESTRAL SPECIES 12 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00900000140957.B ENSGT00920000149497 ENSGT00940000163224.a ENSGT00940000160147.a.n ENSGT00940000160147.a.m ENSGT00940000160183.d.a #29 ENSGT00900000140957.C ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000162840.D ##31 ENSGT00940000153130.a.a.a.c.b #32 Gibbon MODERN SPECIES 14 CDH24 (ENSNLEG00000014900) #7 PSMB5 (ENSNLEG00000034685) #9 C14orf93 (ENSNLEG00000014883) #10 ENSNLEG00000014877 #11 HAUS4 (ENSNLEG00000014853) #12 PRMT5 (ENSNLEG00000014810) #13 RBM23 (ENSNLEG00000014792) #14 REM2 (ENSNLEG00000014788) LRP10 (ENSNLEG00000014773) #15 MMP14 (ENSNLEG00000014762) #16 SLC7A7 (ENSNLEG00000014725) #18 OXA1L (ENSNLEG00000014684) #19 ENSNLEG00000028419 ENSNLEG00000034695 ABHD4 (ENSNLEG00000035873) #21 DAD1 (ENSNLEG00000014666) #22 ENSNLEG00000031059 TRDV3 (ENSNLEG00000014664) ENSNLEG00000027680 ENSNLEG00000029590 #27 ENSNLEG00000032780 ENSNLEG00000033140 ENSNLEG00000035066 TRAV38-2DV8 (ENSNLEG00000030966) ENSNLEG00000031642 ENSNLEG00000033391 #29 ENSNLEG00000033545 ENSNLEG00000035290 #31 ENSNLEG00000034603 ENSNLEG00000030593 ##31 ENSNLEG00000029757 #32 Hominidae ANCESTRAL SPECIES 14 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00900000140957.B ENSGT00920000149497 ENSGT00940000163224.a ENSGT00940000160147.a.n ENSGT00940000160147.a.m ENSGT00940000160183.d.a #29 ENSGT00900000140957.C ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000162840.D ##31 ENSGT00940000153130.a.a.a.c.b #32 Homo/Pan/Gorilla group ANCESTRAL SPECIES 12 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00900000140957.B ENSGT00920000149497 ENSGT00940000163224.a ENSGT00940000160147.a.n ENSGT00940000160147.a.m ENSGT00940000160183.d.a #29 ENSGT00900000140957.C ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000162840.D ##31 ENSGT00940000153130.a.a.a.c.b #32 Gorilla MODERN SPECIES 5 CDH24 (ENSGGOG00000007398) #7 PSMB11 (ENSGGOG00000007392) #8 PSMB5 (ENSGGOG00000026856) #9 C14orf93 (ENSGGOG00000014548) #10 AJUBA (ENSGGOG00000014539) #11 HAUS4 (ENSGGOG00000007504) #12 PRMT5 (ENSGGOG00000010839) #13 RBM23 (ENSGGOG00000015707) #14 REM2 (ENSGGOG00000015704) LRP10 (ENSGGOG00000015695) #15 MMP14 (ENSGGOG00000001650) #16 MRPL52 (ENSGGOG00000001649) #17 SLC7A7 (ENSGGOG00000003694) #18 OXA1L (ENSGGOG00000003688) #19 ABHD4 (ENSGGOG00000007368) #21 DAD1 (ENSGGOG00000028137) #22 TRAC (ENSGGOG00000024280) ENSGGOG00000022509 TRDV3 (ENSGGOG00000028378) ENSGGOG00000037441 ENSGGOG00000043281 #27 TRAV41 (ENSGGOG00000041745) ENSGGOG00000036346 TRAV38-2DV8 (ENSGGOG00000036359) TRAV38-1 (ENSGGOG00000039562) TRAV36DV7 (ENSGGOG00000037745) #29 ENSGGOG00000039312 #35 ENSGGOG00000039281 ENSGGOG00000037871 ##31 TRAV29DV5 (ENSGGOG00000038663) #32 ENSGGOG00000036547 #33 Homo/Pan group ANCESTRAL SPECIES 11 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00900000140957.B ENSGT00920000149497 ENSGT00940000163224.a ENSGT00940000160147.a.n ENSGT00940000160147.a.m ENSGT00940000160183.d.a #29 ENSGT00900000140957.C ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000162840.D ##31 ENSGT00940000153130.a.a.a.c.b #32 Human MODERN SPECIES 5 PSMB5 (ENSG00000100804) #9 C14orf93 (ENSG00000100802) #10 AJUBA (ENSG00000129474) #11 ENSG00000259132 HAUS4 (ENSG00000092036) #12 PRMT5 (ENSG00000100462) #13 RBM23 (ENSG00000100461) #14 REM2 (ENSG00000139890) LRP10 (ENSG00000197324) #15 MMP14 (ENSG00000157227) #16 MRPL52 (ENSG00000172590) #17 SLC7A7 (ENSG00000155465) #18 OXA1L (ENSG00000155463) #19 OR6J1 (ENSG00000255804) ABHD4 (ENSG00000100439) #21 DAD1 (ENSG00000129562) #22 TRAC (ENSG00000277734) TRAJ1 (ENSG00000211888) TRAJ2 (ENSG00000211887) TRAJ3 (ENSG00000211886) TRAJ4 (ENSG00000211885) TRAJ5 (ENSG00000211884) TRAJ6 (ENSG00000211883) TRAJ7 (ENSG00000211882) TRAJ9 (ENSG00000211880) TRAJ10 (ENSG00000211879) TRAJ11 (ENSG00000211878) TRAJ12 (ENSG00000211877) TRAJ13 (ENSG00000211876) TRAJ14 (ENSG00000211875) TRAJ16 (ENSG00000211873) Pan ANCESTRAL SPECIES 8 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00940000173064 ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00920000149497 ENSGT00940000160147.a.n ENSGT00940000160147.a.m ENSGT00940000160183.d.a #29 ENSGT00900000140957.C ENSGT00940000162524.A ENSGT00940000162840.D ##31 ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000153073.b.b.b.b.j ##34 Chimpanzee MODERN SPECIES 5 ACIN1 (ENSPTRG00000006159) CDH24 (ENSPTRG00000006158) #7 PSMB5 (ENSPTRG00000006156) #9 C14H14orf93 (ENSPTRG00000006155) #10 AJUBA (ENSPTRG00000006154) #11 HAUS4 (ENSPTRG00000006153) #12 PRMT5 (ENSPTRG00000006152) #13 RBM23 (ENSPTRG00000006151) #14 REM2 (ENSPTRG00000006150) LRP10 (ENSPTRG00000006149) #15 MMP14 (ENSPTRG00000006148) #16 MRPL52 (ENSPTRG00000006147) #17 SLC7A7 (ENSPTRG00000006146) #18 OXA1L (ENSPTRG00000006145) #19 ABHD4 (ENSPTRG00000006143) #21 DAD1 (ENSPTRG00000006141) #22 TRAC (ENSPTRG00000044038) TRDV3 (ENSPTRG00000050301) ENSPTRG00000048464 ENSPTRG00000048936 #27 TRAV41 (ENSPTRG00000046333) TRAV38-2DV8 (ENSPTRG00000042891) TRAV38-1 (ENSPTRG00000046310) ENSPTRG00000047747 #29 ENSPTRG00000044743 TRAV26-2 (ENSPTRG00000044511) ENSPTRG00000046695 ##31 ENSPTRG00000049224 #32 ENSPTRG00000044789 #33 ENSPTRG00000043764 ##34 ENSPTRG00000049386 Bonobo MODERN SPECIES 5 CDH24 (ENSPPAG00000035182) #7 PSMB11 (ENSPPAG00000005580) #8 PSMB5 (ENSPPAG00000043004) #9 C14orf93 (ENSPPAG00000036818) #10 AJUBA (ENSPPAG00000031512) #11 HAUS4 (ENSPPAG00000040161) #12 PRMT5 (ENSPPAG00000032055) #13 RBM23 (ENSPPAG00000037922) #14 REM2 (ENSPPAG00000041292) LRP10 (ENSPPAG00000029431) #15 MMP14 (ENSPPAG00000037241) #16 MRPL52 (ENSPPAG00000033265) #17 SLC7A7 (ENSPPAG00000036954) #18 OXA1L (ENSPPAG00000034085) #19 ABHD4 (ENSPPAG00000030993) #21 DAD1 (ENSPPAG00000026093) #22 TRAC (ENSPPAG00000037107) TRDV3 (ENSPPAG00000011053) ENSPPAG00000009192 ENSPPAG00000014917 #27 TRAV41 (ENSPPAG00000033024) ENSPPAG00000033074 TRAV38-2DV8 (ENSPPAG00000032924) ENSPPAG00000040762 TRAV36DV7 (ENSPPAG00000032956) #29 ENSPPAG00000032939 TRAV26-2 (ENSPPAG00000032959) ENSPPAG00000033355 #36 ENSPPAG00000033053 ##35 ENSPPAG00000034991 TRAV21 (ENSPPAG00000032865) Orangutan MODERN SPECIES 5 ENSPPYG00000005655 #8 C14H14orf93 (ENSPPYG00000005653) #10 AJUBA (ENSPPYG00000005652) #11 HAUS4 (ENSPPYG00000005651) #12 PRMT5 (ENSPPYG00000005650) #13 RBM23 (ENSPPYG00000005649) #14 REM2 (ENSPPYG00000005648) LRP10 (ENSPPYG00000005647) #15 MMP14 (ENSPPYG00000005646) #16 ENSPPYG00000005645 #17 SLC7A7 (ENSPPYG00000005643) #18 OXA1L (ENSPPYG00000005642) #19 ENSPPYG00000019928 OR6J1 (ENSPPYG00000005640) ABHD4 (ENSPPYG00000005639) #21 DAD1 (ENSPPYG00000005638) #22 ENSPPYG00000031404 TRAC (ENSPPYG00000005637) ENSPPYG00000033635 ENSPPYG00000034775 ENSPPYG00000040530 TRAJ18 (ENSPPYG00000032749) ENSPPYG00000040270 ENSPPYG00000040330 ENSPPYG00000041342 ENSPPYG00000034396 ENSPPYG00000035246 ENSPPYG00000035728 ENSPPYG00000029962 ENSPPYG00000031151 ENSPPYG00000030890 Cercopithecidae ANCESTRAL SPECIES 7 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634.g #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b.`b.b #21 ENSGT00390000016277.b.ab #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00940000160147.a.n ENSGT01050000248319 ENSGT01050000248383 ENSGT01050000245453 ENSGT00940000165951 ENSGT00920000149497 ENSGT00940000163224.a ENSGT00940000160147.a.m ENSGT00940000160183.d.a #29 ENSGT00940000153130.a.b.a.a #35 ENSGT00940000162840.C #31 Cercopithecinae ANCESTRAL SPECIES 2 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634.g #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT00390000016277.b.ab #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00940000160147.a.n ENSGT00920000149497 ENSGT00940000163224.a ENSGT00940000160147.a.m ENSGT00940000160183.d.a #29 ENSGT00940000153130.a.b.a.a #35 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000162840.D ##31 ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 Vervet Monkey MODERN SPECIES 21 CDH24 (ENSCSAG00000016106) #7 PSMB11 (ENSCSAG00000019676) #8 PSMB5 (ENSCSAG00000016112) #9 C14orf93 (ENSCSAG00000016115) #10 AJUBA (ENSCSAG00000016121) #11 HAUS4 (ENSCSAG00000016126) #12 PRMT5 (ENSCSAG00000016179) #13 RBM23 (ENSCSAG00000016213) #14 REM2 (ENSCSAG00000016222) LRP10 (ENSCSAG00000016235) #15 MMP14 (ENSCSAG00000016239) #16 MRPL52 (ENSCSAG00000016242) #17 SLC7A7 (ENSCSAG00000016247) #18 OXA1L (ENSCSAG00000016254) #19 ABHD4 (ENSCSAG00000016272) #21 DAD1 (ENSCSAG00000016279) #22 ENSCSAG00000016283 TRAC (ENSCSAG00000016292) TRAJ2 (ENSCSAG00000019675) ENSCSAG00000019674 ENSCSAG00000019673 ENSCSAG00000019672 ENSCSAG00000019671 ENSCSAG00000019670 ENSCSAG00000019669 TRAJ28 (ENSCSAG00000019668) ENSCSAG00000019667 ENSCSAG00000019666 TRAJ42 (ENSCSAG00000019665) ENSCSAG00000000333 ENSCSAG00000000334 Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634.g #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT00390000016277.b.ab #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT01050000248319 ENSGT01050000248383 ENSGT01050000245453 ENSGT00960000192634 ENSGT01050000247358 ENSGT00980000200245 ENSGT01080000258109 ENSGT01050000248103 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00940000160147.a.n ENSGT00920000149497 ENSGT00940000163224.a Macaca ANCESTRAL SPECIES 1 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634.g #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT00390000016277.b.ab #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00940000160147.a.n ENSGT00940000163224.a ENSGT00940000160147.a.m ENSGT00940000160183.d.a #29 ENSGT00940000153130.a.b.a.a #35 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000162840.D ##31 ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00510000047029.z.e.e.b.a.b Pig-tailed macaque MODERN SPECIES 287 ACIN1 (ENSMNEG00000035938) CDH24 (ENSMNEG00000030948) #7 PSMB5 (ENSMNEG00000044213) #9 C14orf93 (ENSMNEG00000039045) #10 AJUBA (ENSMNEG00000033852) #11 HAUS4 (ENSMNEG00000040020) #12 PRMT5 (ENSMNEG00000035535) #13 RBM23 (ENSMNEG00000042442) #14 REM2 (ENSMNEG00000028496) LRP10 (ENSMNEG00000039487) #15 MMP14 (ENSMNEG00000030751) #16 MRPL52 (ENSMNEG00000029791) #17 SLC7A7 (ENSMNEG00000043785) #18 OXA1L (ENSMNEG00000031247) #19 ENSMNEG00000033846 #21 DAD1 (ENSMNEG00000043891) #22 TRAC (ENSMNEG00000038635) TRDV3 (ENSMNEG00000012962) ENSMNEG00000024468 TRDC (ENSMNEG00000020614) #27 TRAV41 (ENSMNEG00000038293) TRAV38-2DV8 (ENSMNEG00000038225) TRAV38-1 (ENSMNEG00000001485) TRAV36DV7 (ENSMNEG00000004459) #29 TRAV34 (ENSMNEG00000038004) #31 TRAV26-2 (ENSMNEG00000038137) TRAV30 (ENSMNEG00000002565) ##31 ENSMNEG00000040982 ENSMNEG00000020299 #33 ENSMNEG00000026014 TRDV1 (ENSMNEG00000017026) #36 Macaca_a ANCESTRAL SPECIES 2 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00940000163505.a.a.a.b.b.b ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634.g #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT00390000016277.b.ab #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00980000203093 ENSGT01050000248383 ENSGT01050000245453 ENSGT01030000240289 ENSGT00960000192634 ENSGT01050000247358 ENSGT01010000227904 ENSGT01050000247663 ENSGT00980000200245 ENSGT01080000258109 ENSGT01050000248103 ENSGT01030000240329 ENSGT00730000111639 ENSGT00550000075201 #27 Crab-eating macaque MODERN SPECIES 17 PSMB5 (ENSMFAG00000040803) #9 PSMB11 (ENSMFAG00000010271) #8 ENSMFAG00000035808 C14orf93 (ENSMFAG00000001383) #10 AJUBA (ENSMFAG00000055086) #11 HAUS4 (ENSMFAG00000042332) #12 PRMT5 (ENSMFAG00000001324) #13 RBM23 (ENSMFAG00000037595) #14 REM2 (ENSMFAG00000032788) LRP10 (ENSMFAG00000040578) #15 MMP14 (ENSMFAG00000038289) #16 MRPL52 (ENSMFAG00000000620) #17 SLC7A7 (ENSMFAG00000045060) #18 OXA1L (ENSMFAG00000015207) #19 ENSMFAG00000001529 #21 DAD1 (ENSMFAG00000029604) #22 ENSMFAG00000059308 ENSMFAG00000062552 ENSMFAG00000055649 ENSMFAG00000065697 TRAJ18 (ENSMFAG00000052354) ENSMFAG00000063063 ENSMFAG00000053881 ENSMFAG00000056354 ENSMFAG00000061803 ENSMFAG00000057943 ENSMFAG00000056938 ENSMFAG00000065126 ENSMFAG00000061224 ENSMFAG00000056895 ENSMFAG00000058245 Rhesus MODERN SPECIES 17 PSMB5 (ENSMMUG00000006007) #9 PSMB11 (ENSMMUG00000006008) #8 ENSMMUG00000013585 C7H14orf93 (ENSMMUG00000008477) #10 AJUBA (ENSMMUG00000008475) #11 HAUS4 (ENSMMUG00000002668) #12 PRMT5 (ENSMMUG00000001035) #13 RBM23 (ENSMMUG00000018381) #14 REM2 (ENSMMUG00000016098) LRP10 (ENSMMUG00000016100) #15 MMP14 (ENSMMUG00000013665) #16 MRPL52 (ENSMMUG00000013663) #17 SLC7A7 (ENSMMUG00000000413) #18 OXA1L (ENSMMUG00000000411) #19 ABHD4 (ENSMMUG00000009441) #21 DAD1 (ENSMMUG00000000830) #22 ENSMMUG00000054763 ENSMMUG00000052151 ENSMMUG00000059713 ENSMMUG00000055037 TRAJ18 (ENSMMUG00000059574) ENSMMUG00000065053 ENSMMUG00000060586 ENSMMUG00000062391 ENSMMUG00000058816 ENSMMUG00000057959 ENSMMUG00000056130 ENSMMUG00000060759 ENSMMUG00000049869 ENSMMUG00000055506 ENSMMUG00000057333 Cercopithecinae_b ANCESTRAL SPECIES 8 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634.g #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT00390000016277.b.ab #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT01050000248319 ENSGT01050000248383 ENSGT01050000245453 ENSGT00960000192634 ENSGT01050000247358 ENSGT00980000200245 ENSGT01080000258109 ENSGT01050000248103 ENSGT00730000111639 ENSGT00940000165951 ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00920000149497 ENSGT00940000163224.a Olive baboon MODERN SPECIES 17 CDH24 (ENSPANG00000019643) #7 PSMB11 (ENSPANG00000017114) #8 ENSPANG00000015305 #9 C14orf93 (ENSPANG00000011161) #10 AJUBA (ENSPANG00000011738) #11 HAUS4 (ENSPANG00000015306) #12 PRMT5 (ENSPANG00000017607) #13 RBM23 (ENSPANG00000001324) #14 REM2 (ENSPANG00000026142) LRP10 (ENSPANG00000003911) #15 MMP14 (ENSPANG00000023206) #16 MRPL52 (ENSPANG00000021102) #17 SLC7A7 (ENSPANG00000020911) #18 OXA1L (ENSPANG00000011741) #19 ABHD4 (ENSPANG00000003912) #21 DAD1 (ENSPANG00000022399) #22 TRAC (ENSPANG00000022567) ENSPANG00000046666 ENSPANG00000040216 ENSPANG00000049551 TRAJ18 (ENSPANG00000043807) ENSPANG00000038254 ENSPANG00000040179 ENSPANG00000039002 ENSPANG00000037419 ENSPANG00000042807 ENSPANG00000046834 ENSPANG00000040954 ENSPANG00000050368 ENSPANG00000046979 ENSPANG00000046067 Cercopithecinae_d ANCESTRAL SPECIES 109 ENSGT00940000159567 #7 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634.g #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT00390000016277.b.ab #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00940000170243 ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00940000160147.a.n ENSGT00940000160147.a.m ENSGT00940000160183.d.a #29 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000162840.D ##31 ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00510000047029.z.e.e.b.a.b ENSGT00940000162524.B.f Drill MODERN SPECIES 1047 CDH24 (ENSMLEG00000033931) #7 PSMB11 (ENSMLEG00000013212) #8 PSMB5 (ENSMLEG00000042905) #9 C14orf93 (ENSMLEG00000040701) #10 AJUBA (ENSMLEG00000001372) #11 ENSMLEG00000044268 #12 PRMT5 (ENSMLEG00000035801) #13 RBM23 (ENSMLEG00000039954) #14 REM2 (ENSMLEG00000032118) LRP10 (ENSMLEG00000043127) #15 MMP14 (ENSMLEG00000000094) #16 MRPL52 (ENSMLEG00000035746) #17 SLC7A7 (ENSMLEG00000014136) #18 OXA1L (ENSMLEG00000029808) #19 ENSMLEG00000043691 #21 DAD1 (ENSMLEG00000041482) #22 TRAC (ENSMLEG00000039915) TRDV3 (ENSMLEG00000025676) ENSMLEG00000024199 TRAV38-2DV8 (ENSMLEG00000021755) TRAV38-1 (ENSMLEG00000025157) Sooty mangabey MODERN SPECIES 288 CDH24 (ENSCATG00000011377) #7 PSMB11 (ENSCATG00000010453) #8 PSMB5 (ENSCATG00000044133) #9 C14orf93 (ENSCATG00000044847) #10 AJUBA (ENSCATG00000032482) #11 ENSCATG00000041460 #12 PRMT5 (ENSCATG00000014579) #13 RBM23 (ENSCATG00000017832) #14 REM2 (ENSCATG00000012864) LRP10 (ENSCATG00000041990) #15 MMP14 (ENSCATG00000003284) #16 MRPL52 (ENSCATG00000030157) #17 ENSCATG00000030947 #18 OXA1L (ENSCATG00000009400) #19 ENSCATG00000022305 #21 DAD1 (ENSCATG00000016897) #22 TRAC (ENSCATG00000037406) TRDV3 (ENSCATG00000019903) ENSCATG00000019120 TRDC (ENSCATG00000018487) #27 TRAV41 (ENSCATG00000019226) TRAV38-2DV8 (ENSCATG00000019859) TRAV38-1 (ENSCATG00000020630) TRAV36DV7 (ENSCATG00000022068) #29 TRAV34 (ENSCATG00000022605) #31 TRAV26-2 (ENSCATG00000023223) TRAV30 (ENSCATG00000023212) ##31 ENSCATG00000023532 #33 Rhinopithecus ANCESTRAL SPECIES 128 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634.g #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b.`b.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00940000170243 Golden snub-nosed monkey MODERN SPECIES 2083 PSMB11 (ENSRROG00000025908) #8 PSMB5 (ENSRROG00000034076) #9 C14orf93 (ENSRROG00000007559) #10 AJUBA (ENSRROG00000040110) #11 ENSRROG00000044756 #12 PRMT5 (ENSRROG00000028985) #13 RBM23 (ENSRROG00000044026) #14 REM2 (ENSRROG00000000769) LRP10 (ENSRROG00000045101) #15 MMP14 (ENSRROG00000032097) #16 MRPL52 (ENSRROG00000038692) #17 SLC7A7 (ENSRROG00000036587) #18 OXA1L (ENSRROG00000031458) #19 ENSRROG00000003728 ENSRROG00000030064 #21 DAD1 (ENSRROG00000032400) #22 TRAC (ENSRROG00000044326) TRDV3 (ENSRROG00000007769) ENSRROG00000026774 Black snub-nosed monkey MODERN SPECIES 2556 ENSRBIG00000038153 #8 ENSRBIG00000035585 #9 C14orf93 (ENSRBIG00000006042) #10 AJUBA (ENSRBIG00000039769) #11 ENSRBIG00000028589 #12 PRMT5 (ENSRBIG00000033709) #13 RBM23 (ENSRBIG00000039276) #14 REM2 (ENSRBIG00000031050) LRP10 (ENSRBIG00000030290) #15 MMP14 (ENSRBIG00000041147) #16 MRPL52 (ENSRBIG00000016834) #17 SLC7A7 (ENSRBIG00000036121) #18 OXA1L (ENSRBIG00000043882) #19 ENSRBIG00000005098 ENSRBIG00000030411 #21 DAD1 (ENSRBIG00000018620) #22 TRAC (ENSRBIG00000041666) TRDV3 (ENSRBIG00000001337) ENSRBIG00000022469 TRAV41 (ENSRBIG00000021879) Platyrrhini ANCESTRAL SPECIES 4 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546.a #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00920000149497 ENSGT00940000163224.a ENSGT00940000160147.a.n.b ENSGT00940000160147.a.m ENSGT00940000153130.a.b.b ##35 ENSGT00940000160147.a.n.a ENSGT00940000160183.d.a #29 ENSGT00900000140957.C.a ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000162840.D ##31 ENSGT00960000188395 Mas night monkey MODERN SPECIES 819 CDH24 (ENSANAG00000023080) #7 PSMB5 (ENSANAG00000029997) #9 C14orf93 (ENSANAG00000015389) #10 AJUBA (ENSANAG00000032654) #11 HAUS4 (ENSANAG00000037413) #12 PRMT5 (ENSANAG00000035246) #13 ENSANAG00000031466 #14 REM2 (ENSANAG00000024097) LRP10 (ENSANAG00000029303) #15 MMP14 (ENSANAG00000021316) #16 MRPL52 (ENSANAG00000037074) #17 SLC7A7 (ENSANAG00000036104) #18 OXA1L (ENSANAG00000034299) #19 ENSANAG00000014624 ABHD4 (ENSANAG00000023988) #21 DAD1 (ENSANAG00000029416) #22 TRAC (ENSANAG00000024027) TRDC (ENSANAG00000013027) #27 TRAV38-2DV8 (ENSANAG00000013358) TRAV38-1 (ENSANAG00000013268) TRAV34 (ENSANAG00000011361) #31 TRAV26-2 (ENSANAG00000011824) TRAV30 (ENSANAG00000013331) ##31 ENSANAG00000024325 TRAV8-7 (ENSANAG00000029257) ##34 ENSANAG00000011148 TRAV24 (ENSANAG00000013613) ENSANAG00000021962 TRAV21 (ENSANAG00000010177) TRAV20 (ENSANAG00000016117) ##29 TRAV18 (ENSANAG00000012778) Cebidae ANCESTRAL SPECIES 3 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546.a #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00920000149497 ENSGT00940000163224.a ENSGT00940000160147.a.n.b ENSGT00940000153130.a.b.b ##35 ENSGT00940000160147.a.n.a ENSGT00940000160183.d.a #29 ENSGT00900000140957.C.a ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000162998.a Marmoset MODERN SPECIES 1 C14orf93 (ENSCJAG00000008320) #10 AJUBA (ENSCJAG00000008376) #11 ENSCJAG00000008389 #12 ENSCJAG00000008409 #13 RBM23 (ENSCJAG00000008482) #14 REM2 (ENSCJAG00000037144) LRP10 (ENSCJAG00000008522) #15 MMP14 (ENSCJAG00000008538) #16 MRPL52 (ENSCJAG00000035615) #17 SLC7A7 (ENSCJAG00000008592) #18 ENSCJAG00000082162 ENSCJAG00000008664 #19 ENSCJAG00000085751 ABHD4 (ENSCJAG00000008681) #21 ENSCJAG00000047195 DAD1 (ENSCJAG00000074739) #22 TRAC (ENSCJAG00000008714) ENSCJAG00000045165 ENSCJAG00000041313 ENSCJAG00000046505 ENSCJAG00000039022 ENSCJAG00000046331 ENSCJAG00000046757 ENSCJAG00000045350 ENSCJAG00000039105 ENSCJAG00000038280 ENSCJAG00000042576 ENSCJAG00000045740 ENSCJAG00000047190 TRDC (ENSCJAG00000085557) #27 TRDV2 (ENSCJAG00000042880) Cebidae_a ANCESTRAL SPECIES 4 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546.a #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00920000149497 ENSGT00940000163224.a ENSGT00940000160147.a.n.b ENSGT00940000160147.a.n.a ENSGT00940000160183.d.a #29 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000153130.a.b.a.b #33 ENSGT00940000162998.a ENSGT00900000140957.C.b ENSGT00940000163717 ENSGT00900000140957.A.a.b Bolivian squirrel monkey MODERN SPECIES 52 PSMB11 (ENSSBOG00000008921) #8 PSMB5 (ENSSBOG00000030520) #9 C14orf93 (ENSSBOG00000018297) #10 AJUBA (ENSSBOG00000028963) #11 HAUS4 (ENSSBOG00000023415) #12 PRMT5 (ENSSBOG00000036125) #13 ENSSBOG00000023037 #14 REM2 (ENSSBOG00000023345) LRP10 (ENSSBOG00000033889) #15 MMP14 (ENSSBOG00000026846) #16 MRPL52 (ENSSBOG00000022662) #17 SLC7A7 (ENSSBOG00000032553) #18 OXA1L (ENSSBOG00000028461) #19 ENSSBOG00000005105 ABHD4 (ENSSBOG00000034998) #21 DAD1 (ENSSBOG00000020528) #22 ENSSBOG00000033224 TRDC (ENSSBOG00000019484) #27 TRAV41 (ENSSBOG00000010905) ENSSBOG00000004003 ENSSBOG00000019119 TRAV34 (ENSSBOG00000018340) #31 TRAV26-2 (ENSSBOG00000018946) ENSSBOG00000009785 #33 TRAV26-1 (ENSSBOG00000018975) ENSSBOG00000019528 TRAV22 (ENSSBOG00000027440) TRAV21 (ENSSBOG00000008898) TRAV12-3 (ENSSBOG00000007472) ##35 TRAV8-3 (ENSSBOG00000035186) #34 TRAV12-1 (ENSSBOG00000019726) ##35 Capuchin DUPLICATION Capuchin MODERN SPECIES 196 CTSV (ENSCCAG00000030717) FAM240B (ENSCCAG00000037201) ENSCCAG00000027284 ENSCCAG00000037426 ENSCCAG00000023018 ENSCCAG00000021897 ENSCCAG00000036180 ENSCCAG00000025019 ENSCCAG00000032829 ENSCCAG00000031010 PRXL2C (ENSCCAG00000021330) ENSCCAG00000030771 ENSCCAG00000004738 ENSCCAG00000026671 HABP4 (ENSCCAG00000029535) ENSCCAG00000025778 #22 ZNF367 (ENSCCAG00000011083) SLC35D2 (ENSCCAG00000019726) HSD17B3 (ENSCCAG00000032712) ENSCCAG00000026980 PTCH1 (ENSCCAG00000021603) ENSCCAG00000029017 ENSCCAG00000034109 FANCC (ENSCCAG00000026638) AOPEP (ENSCCAG00000029936) FBP1 (ENSCCAG00000005125) FBP2 (ENSCCAG00000022182) Capuchin MODERN SPECIES 170 CDH24 (ENSCCAG00000029972) #7 ENSCCAG00000032430 #9 C14orf93 (ENSCCAG00000009885) #10 AJUBA (ENSCCAG00000035773) #11 HAUS4 (ENSCCAG00000033831) #12 PRMT5 (ENSCCAG00000034980) #13 ENSCCAG00000025114 #14 REM2 (ENSCCAG00000034864) LRP10 (ENSCCAG00000032914) #15 MMP14 (ENSCCAG00000023613) #16 MRPL52 (ENSCCAG00000035013) #17 SLC7A7 (ENSCCAG00000031142) #18 OXA1L (ENSCCAG00000036442) #19 ABHD4 (ENSCCAG00000029397) #21 ENSCCAG00000035365 #22 ENSCCAG00000035123 #22 TRAC (ENSCCAG00000038072) TRDC (ENSCCAG00000033911) #27 TRAV41 (ENSCCAG00000028015) TRAV40 (ENSCCAG00000026707) TRAV39 (ENSCCAG00000020589) ENSCCAG00000018642 ENSCCAG00000017661 TRAV36DV7 (ENSCCAG00000013691) #29 TRAV34 (ENSCCAG00000013656) #31 TRAV26-2 (ENSCCAG00000018936) ENSCCAG00000016540 #33 TRAV26-1 (ENSCCAG00000035723) ENSCCAG00000010783 TRAV24 (ENSCCAG00000020236) TRAV22 (ENSCCAG00000028395) Capuchin MODERN SPECIES 170 TRAV24 (ENSCCAG00000020236) ENSCCAG00000010783 TRAV26-1 (ENSCCAG00000035723) ENSCCAG00000016540 #33 TRAV26-2 (ENSCCAG00000018936) TRAV34 (ENSCCAG00000013656) #31 TRAV36DV7 (ENSCCAG00000013691) #29 ENSCCAG00000017661 ENSCCAG00000018642 TRAV39 (ENSCCAG00000020589) TRAV40 (ENSCCAG00000026707) TRAV41 (ENSCCAG00000028015) TRDC (ENSCCAG00000033911) #27 TRAC (ENSCCAG00000038072) ENSCCAG00000035123 #22 ENSCCAG00000035365 #22 ABHD4 (ENSCCAG00000029397) #21 OXA1L (ENSCCAG00000036442) #19 SLC7A7 (ENSCCAG00000031142) #18 MRPL52 (ENSCCAG00000035013) #17 MMP14 (ENSCCAG00000023613) #16 LRP10 (ENSCCAG00000032914) #15 REM2 (ENSCCAG00000034864) ENSCCAG00000025114 #14 PRMT5 (ENSCCAG00000034980) #13 HAUS4 (ENSCCAG00000033831) #12 AJUBA (ENSCCAG00000035773) #11 C14orf93 (ENSCCAG00000009885) #10 ENSCCAG00000032430 #9 CDH24 (ENSCCAG00000029972) #7 ACIN1 (ENSCCAG00000029776) Tarsier DUPLICATION Tarsier MODERN SPECIES 5703 HAUS4 (ENSTSYG00000012825) #12 PRMT5 (ENSTSYG00000026964) #13 RBM23 (ENSTSYG00000014755) #14 REM2 (ENSTSYG00000006124) LRP10 (ENSTSYG00000006119) #15 MMP14 (ENSTSYG00000001822) #16 MRPL52 (ENSTSYG00000028483) #17 SLC7A7 (ENSTSYG00000014508) #18 OXA1L (ENSTSYG00000014505) #19 ENSTSYG00000026842 ABHD4 (ENSTSYG00000014128) #21 DAD1 (ENSTSYG00000013309) #22 ENSTSYG00000033139 Tarsier MODERN SPECIES 6554 ENSTSYG00000030192 #22 Laurasiatheria ANCESTRAL SPECIES 3 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT00910000148211 #20 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000164778 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000160183.d.a #29 ENSGT00900000140957.C ENSGT00940000162998.a ENSGT00940000153130.a.b.a.a #35 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 Laurasiatheria_a ANCESTRAL SPECIES 2 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000164778 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000160183.d.a #29 ENSGT00900000140957.C ENSGT00940000153130.a.b.b ##35 ENSGT00940000166072 #30 ENSGT00940000153130.a.b.a.a.b #35 ENSGT00940000162840.C #31 ENSGT00940000162524.A Laurasiatheria_b ANCESTRAL SPECIES 3 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000170768 ENSGT01050000244869.a.b.a ENSGT01050000244869.a.b.b ENSGT00940000162245 ENSGT00910000147451 ENSGT00550000075058 ENSGT00940000154888 ENSGT00940000153886.a.a.k ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A ENSGT00940000153402.d ENSGT01100000263494.a.b.b.a ENSGT00400000023212 ENSGT00940000161408 Carnivora ANCESTRAL SPECIES ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00920000149497 ENSGT00940000164778 ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000160183.d.a #29 ENSGT00900000140957.C ENSGT00940000153130.a.b.a.a.b #35 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000165763 ENSGT00940000153130.a.a.a.c.b #32 Felidae ANCESTRAL SPECIES 1 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134.e #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B.c ENSGT01090000260011.B.d ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00940000160147.a ENSGT00940000160183.d.a #29 ENSGT00900000140957.C ENSGT00940000162524.A ENSGT00940000161790 #36 ENSGT00940000165763 ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000153073.b.b.b.b.o.a.a ##34 ENSGT00940000153130.a.b.a.a.a #35 ENSGT00940000163717 ENSGT00940000153130.a.a.a.c.a ##35 Panthera ANCESTRAL SPECIES 3 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134.e #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B.c ENSGT01090000260011.B.d ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00940000160147.a ENSGT00940000160183.d.a #29 ENSGT00900000140957.C ENSGT00940000162524.A ENSGT00940000161790 #36 ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000163224.b.b ENSGT00940000153073.b.b.b.b.o.a.a ##34 ENSGT00940000153130.a.b.a.a.a #35 ENSGT00940000163717 ENSGT00940000153130.a.a.a.c.a ##35 ENSGT00900000140957.A.a.b Panthera_a ANCESTRAL SPECIES 7 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134.e #18 ENSGT00530000063506.B #19 ENSGT00910000148211 #20 ENSGT01090000260011.B.c ENSGT01090000260011.B.d ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00940000170768 ENSGT00940000160147.a.e ENSGT00940000160183.d.a #29 ENSGT00900000140957.C ENSGT00940000162524.A ENSGT00940000161790 #36 ENSGT00940000162840.C #31 ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000163224.b.b ENSGT00940000153073.b.b.b.b.o.a.a ##34 ENSGT00940000153130.a.b.a.a.a #35 ENSGT00940000163717 ENSGT00940000153130.a.a.a.c.a ##35 ENSGT00940000153073.b.b.b.b.p.a ##34 lion DUPLICATION lion MODERN SPECIES 6 PSMB11 (ENSPLOG00000010711) #8 PSMB5 (ENSPLOG00000010681) #9 C14orf93 (ENSPLOG00000010622) #10 AJUBA (ENSPLOG00000010481) #11 HAUS4 (ENSPLOG00000010383) #12 PRMT5 (ENSPLOG00000010113) #13 RBM23 (ENSPLOG00000009954) #14 REM2 (ENSPLOG00000009863) LRP10 (ENSPLOG00000009786) #15 MMP14 (ENSPLOG00000009721) #16 MRPL52 (ENSPLOG00000009555) #17 SLC7A7 (ENSPLOG00000009515) #18 OXA1L (ENSPLOG00000009362) #19 ENSPLOG00000009334 #20 ABHD4 (ENSPLOG00000009213) #21 ENSPLOG00000009186 #22 TRDC (ENSPLOG00000009139) #27 ENSPLOG00000008643 ENSPLOG00000008497 TRAV41 (ENSPLOG00000010870) ENSPLOG00000010828 ENSPLOG00000010736 ENSPLOG00000010709 #29 ENSPLOG00000010699 ENSPLOG00000010675 ENSPLOG00000010651 #36 TRAV29DV5 (ENSPLOG00000010635) #32 TRAV27 (ENSPLOG00000010609) ENSPLOG00000010599 ##34 ENSPLOG00000010579 #35 ENSPLOG00000010563 lion MODERN SPECIES 315 ENSPLOG00000021585 #22 leopard MODERN SPECIES 132 ENSPPRG00000019685 ENSPPRG00000003218 ABHD4 (ENSPPRG00000003254) #21 DAD1 (ENSPPRG00000003263) #22 ENSPPRG00000003821 #23 ENSPPRG00000003878 ENSPPRG00000003882 ENSPPRG00000019699 ENSPPRG00000003891 TRAV34 (ENSPPRG00000003893) #31 TRAV29DV5 (ENSPPRG00000004199) #32 ENSPPRG00000004206 ##34 ENSPPRG00000004355 ENSPPRG00000004368 ##34 ENSPPRG00000004456 ##34 ENSPPRG00000004471 ENSPPRG00000004480 ENSPPRG00000004567 ENSPPRG00000004581 Tiger MODERN SPECIES 578 C14orf93 (ENSPTIG00000013979) #10 ENSPTIG00000013120 #11 HAUS4 (ENSPTIG00000008583) #12 PRMT5 (ENSPTIG00000014268) #13 RBM23 (ENSPTIG00000007831) #14 REM2 (ENSPTIG00000021000) LRP10 (ENSPTIG00000019760) #15 MMP14 (ENSPTIG00000018375) #16 MRPL52 (ENSPTIG00000015624) #17 SLC7A7 (ENSPTIG00000013224) #18 OXA1L (ENSPTIG00000011174) #19 ENSPTIG00000006761 ENSPTIG00000006755 ENSPTIG00000006751 ABHD4 (ENSPTIG00000006336) #21 DAD1 (ENSPTIG00000005259) #22 ENSPTIG00000001852 #23 ENSPTIG00000018735 TRAV29DV5 (ENSPTIG00000018359) #32 TRAV27 (ENSPTIG00000018322) ENSPTIG00000017571 ##34 Cat MODERN SPECIES 237 PSMB5 (ENSFCAG00000023593) #9 CB3H14orf93 (ENSFCAG00000006642) #10 AJUBA (ENSFCAG00000006641) #11 HAUS4 (ENSFCAG00000006639) #12 PRMT5 (ENSFCAG00000006636) #13 REM2 (ENSFCAG00000006630) LRP10 (ENSFCAG00000006628) #15 MMP14 (ENSFCAG00000006626) #16 MRPL52 (ENSFCAG00000006625) #17 SLC7A7 (ENSFCAG00000024866) #18 OXA1L (ENSFCAG00000006623) #19 ENSFCAG00000022681 ENSFCAG00000052623 ENSFCAG00000049819 #20 ABHD4 (ENSFCAG00000003046) #21 DAD1 (ENSFCAG00000029121) #22 ENSFCAG00000040169 ENSFCAG00000041607 ENSFCAG00000041658 ENSFCAG00000031436 #23 ENSFCAG00000053669 #27 TRAV41 (ENSFCAG00000052720) TRAV40 (ENSFCAG00000047365) ENSFCAG00000042044 #30 ENSFCAG00000050753 ##35 ENSFCAG00000052250 #29 ENSFCAG00000049097 TRAV34 (ENSFCAG00000043775) #31 ENSFCAG00000053564 TRAV29DV5 (ENSFCAG00000026217) #32 ENSFCAG00000051318 #33 Caniformia ANCESTRAL SPECIES 15 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000164778 ENSGT00900000140957.B ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000160183.d.a #29 ENSGT00940000153130.a.b.a.a.b #35 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000165763 ENSGT00940000153130.a.a.a.c.b #32 ENSGT00900000140957.A.b ENSGT00940000153130.a.b.a.b #33 Canidae ANCESTRAL SPECIES 4 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00950000186438 ENSGT01100000265770 ENSGT00990000206538 ENSGT00980000202431 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000164778 ENSGT00920000149497 ENSGT00940000160147.a.a ENSGT00940000166072 #30 ENSGT00940000160147.a.b ENSGT00940000160183.d.a #29 ENSGT00940000162840.C #31 ENSGT00940000162524.A Canis_lupus ANCESTRAL SPECIES 8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00950000186438 ENSGT01100000265770 ENSGT00990000206538 ENSGT00980000202431 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000164778 ENSGT00920000149497 ENSGT00940000160147.a.a ENSGT00940000166072 #30 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000165763 ENSGT00940000153130.a.a.a.c.b #32 Dingo MODERN SPECIES 161 C14orf93 (ENSCAFG00020007664) #10 AJUBA (ENSCAFG00020007676) #11 HAUS4 (ENSCAFG00020007681) #12 PRMT5 (ENSCAFG00020007687) #13 ENSCAFG00020007707 RBM23 (ENSCAFG00020007711) #14 REM2 (ENSCAFG00020007720) LRP10 (ENSCAFG00020007743) #15 MMP14 (ENSCAFG00020007758) #16 MRPL52 (ENSCAFG00020007772) #17 SLC7A7 (ENSCAFG00020007817) #18 OXA1L (ENSCAFG00020007825) #19 ENSCAFG00020007834 ENSCAFG00020007839 #20 ABHD4 (ENSCAFG00020007841) #21 DAD1 (ENSCAFG00020007850) #22 ENSCAFG00020007875 #23 ENSCAFG00020007898 ENSCAFG00020007900 ENSCAFG00020007902 ENSCAFG00020007903 ENSCAFG00020007905 TRDC (ENSCAFG00020007910) #27 ENSCAFG00020007917 ENSCAFG00020007918 ENSCAFG00020007919 #30 TRAV34 (ENSCAFG00020007927) #31 ENSCAFG00020007960 ENSCAFG00020007962 TRAV29DV5 (ENSCAFG00020007963) #32 ENSCAFG00020007964 Dog MODERN SPECIES 36 CDH24 (ENSCAFG00845002943) #7 PSMB11 (ENSCAFG00845002924) #8 PSMB5 (ENSCAFG00845002902) #9 C8H14orf93 (ENSCAFG00845002874) #10 AJUBA (ENSCAFG00845002700) #11 PRMT5 (ENSCAFG00845002461) #13 RBM23 (ENSCAFG00845002223) #14 LRP10 (ENSCAFG00845002154) #15 MMP14 (ENSCAFG00845002121) #16 MRPL52 (ENSCAFG00845002067) #17 ENSCAFG00845002028 #18 OXA1L (ENSCAFG00845002006) #19 OR6E1 (ENSCAFG00845001980) ENSCAFG00845001954 #20 ABHD4 (ENSCAFG00845001920) #21 DAD1 (ENSCAFG00845001882) #22 ENSCAFG00845001851 #23 ENSCAFG00845001837 ENSCAFG00845001794 ENSCAFG00845001774 ENSCAFG00845001757 ENSCAFG00845001753 ENSCAFG00845001743 TRDV3 (ENSCAFG00845001727) ENSCAFG00845001720 TRDC (ENSCAFG00845001699) #27 TRAV40 (ENSCAFG00845001678) ENSCAFG00845001669 ENSCAFG00845001612 #30 ENSCAFG00845001603 #35 ENSCAFG00845001593 Red fox MODERN SPECIES 65 CUNH14orf93 (ENSVVUG00000019857) #10 AJUBA (ENSVVUG00000019846) #11 HAUS4 (ENSVVUG00000019820) #12 PRMT5 (ENSVVUG00000019817) #13 RBM23 (ENSVVUG00000019815) #14 REM2 (ENSVVUG00000019805) LRP10 (ENSVVUG00000019801) #15 MMP14 (ENSVVUG00000019794) #16 ENSVVUG00000019793 #17 SLC7A7 (ENSVVUG00000019789) #18 OXA1L (ENSVVUG00000019787) #19 ENSVVUG00000019784 ENSVVUG00000019779 #20 ABHD4 (ENSVVUG00000019775) #21 ENSVVUG00000019773 #23 DAD1 (ENSVVUG00000019768) #22 ENSVVUG00000019766 ENSVVUG00000019763 ENSVVUG00000019762 ENSVVUG00000019761 TRDC (ENSVVUG00000019759) #27 Caniformia_b ANCESTRAL SPECIES 14 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000166072 #30 ENSGT00940000160183.d.a #29 ENSGT00940000153130.a.b.a.a.b #35 ENSGT00940000162840.C #31 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000153130.a.b.a.a.a #35 ENSGT00940000163717 ENSGT00940000163708 ENSGT00940000160183.c.c ##29 ENSGT00940000163052 Mustelinae ANCESTRAL SPECIES 32 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B.a ENSGT01090000260011.B.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000166072 #30 ENSGT00940000160183.d.a #29 ENSGT00940000153130.a.b.a.a.b #35 ENSGT00940000162840.C #31 ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000153130.a.b.a.a.a #35 ENSGT00940000153130.a.a.a.c.a ##35 ENSGT00900000140957.A.a.b ENSGT00940000163708 ENSGT00940000160183.c.c ##29 ENSGT00940000163052 Ferret MODERN SPECIES 210 PSMB5 (ENSMPUG00000007019) #9 C14orf93 (ENSMPUG00000007064) #10 AJUBA (ENSMPUG00000007116) #11 HAUS4 (ENSMPUG00000007129) #12 PRMT5 (ENSMPUG00000007137) #13 RBM23 (ENSMPUG00000007151) #14 REM2 (ENSMPUG00000007167) LRP10 (ENSMPUG00000007201) #15 MMP14 (ENSMPUG00000007212) #16 SLC7A7 (ENSMPUG00000007228) #18 MRPL52 (ENSMPUG00000007234) #17 OXA1L (ENSMPUG00000007269) #19 ENSMPUG00000018879 ENSMPUG00000018882 ABHD4 (ENSMPUG00000007277) #21 DAD1 (ENSMPUG00000007289) #22 ENSMPUG00000007297 #23 TRDV3 (ENSMPUG00000018887) TRDC (ENSMPUG00000007319) #27 ENSMPUG00000007328 TRAV41 (ENSMPUG00000007333) ENSMPUG00000007338 ENSMPUG00000007342 TRAV26-2 (ENSMPUG00000007358) TRAV29DV5 (ENSMPUG00000007363) #32 ENSMPUG00000007370 TRAV21 (ENSMPUG00000007375) TRAV20 (ENSMPUG00000007384) ##29 ENSMPUG00000007390 TRAV18 (ENSMPUG00000007393) TRAV17 (ENSMPUG00000007402) American mink MODERN SPECIES 148 PSMB5 (ENSNVIG00000021100) #9 C14orf93 (ENSNVIG00000021065) #10 AJUBA (ENSNVIG00000021037) #11 HAUS4 (ENSNVIG00000020969) #12 PRMT5 (ENSNVIG00000020831) #13 RBM23 (ENSNVIG00000020783) #14 REM2 (ENSNVIG00000020767) LRP10 (ENSNVIG00000020742) #15 MMP14 (ENSNVIG00000020727) #16 MRPL52 (ENSNVIG00000020698) #17 SLC7A7 (ENSNVIG00000020676) #18 OXA1L (ENSNVIG00000020650) #19 ENSNVIG00000020641 ENSNVIG00000020633 ABHD4 (ENSNVIG00000020605) #21 DAD1 (ENSNVIG00000020599) #22 ENSNVIG00000020594 ENSNVIG00000020585 ENSNVIG00000020584 #26 ENSNVIG00000020573 ENSNVIG00000020479 #27 ENSNVIG00000020461 #30 ENSNVIG00000020457 #29 ENSNVIG00000020454 #35 TRAV34 (ENSNVIG00000020450) #31 TRAV29DV5 (ENSNVIG00000020447) #32 ENSNVIG00000020443 #33 ENSNVIG00000020435 #35 TRAV23DV6 (ENSNVIG00000020429) ##35 ENSNVIG00000020424 ENSNVIG00000020421 Ursidae ANCESTRAL SPECIES 10 ENSGT00940000162200 #8 ENSGT00940000157841.j #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT01020000232693 ENSGT00730000111639 ENSGT00550000075201 #27 Ursus ANCESTRAL SPECIES 140 ENSGT00940000162200 #8 ENSGT00940000157841.j #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT01050000245453 Polar bear MODERN SPECIES 427 CDH24 (ENSUMAG00000014114) #7 ENSUMAG00000014103 #8 PSMB5 (ENSUMAG00000014101) #9 C14orf93 (ENSUMAG00000014095) #10 ENSUMAG00000014092 #11 HAUS4 (ENSUMAG00000014089) #12 PRMT5 (ENSUMAG00000014079) #13 RBM23 (ENSUMAG00000014075) #14 REM2 (ENSUMAG00000014074) MMP14 (ENSUMAG00000014016) #16 ENSUMAG00000014007 #17 SLC7A7 (ENSUMAG00000013991) #18 OXA1L (ENSUMAG00000013987) #19 ENSUMAG00000013983 ABHD4 (ENSUMAG00000013975) #21 DAD1 (ENSUMAG00000013974) #22 ENSUMAG00000013972 ENSUMAG00000013970 ENSUMAG00000013968 #23 American black bear MODERN SPECIES 2436 MMP14 (ENSUAMG00000022581) #16 MRPL52 (ENSUAMG00000022578) #17 SLC7A7 (ENSUAMG00000022575) #18 OXA1L (ENSUAMG00000022573) #19 ENSUAMG00000022571 ABHD4 (ENSUAMG00000022567) #21 DAD1 (ENSUAMG00000022566) #22 ENSUAMG00000022561 #23 TRAJ18 (ENSUAMG00000022559) Giant Panda MODERN SPECIES 12 ENSAMEG00000030268 #8 PSMB5 (ENSAMEG00000028497) #9 C14orf93 (ENSAMEG00000007462) #10 AJUBA (ENSAMEG00000007445) #11 HAUS4 (ENSAMEG00000007432) #12 PRMT5 (ENSAMEG00000007355) #13 RBM23 (ENSAMEG00000007322) #14 REM2 (ENSAMEG00000007306) LRP10 (ENSAMEG00000007296) #15 MMP14 (ENSAMEG00000007272) #16 MRPL52 (ENSAMEG00000029738) #17 SLC7A7 (ENSAMEG00000007223) #18 OXA1L (ENSAMEG00000007188) #19 ENSAMEG00000007183 ABHD4 (ENSAMEG00000007159) #21 DAD1 (ENSAMEG00000024890) #22 ENSAMEG00000027810 #23 ENSAMEG00000027441 ENSAMEG00000024270 ENSAMEG00000024698 TRDV3 (ENSAMEG00000007139) ENSAMEG00000029177 #23 ENSAMEG00000007133 #27 ENSAMEG00000030541 ENSAMEG00000023771 #35 ENSAMEG00000023714 ENSAMEG00000024115 #32 ENSAMEG00000025543 #35 TRAV24 (ENSAMEG00000025745) ENSAMEG00000026651 TRAV20 (ENSAMEG00000007052) ##29 Laurasiatheria_c ANCESTRAL SPECIES 1 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT01100000264510 ENSGT01070000257199 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000164778 ENSGT00900000140957.B ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000165763 ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000153073.b.b.b.a.a #34 ENSGT00940000153130.a.b.a.a.a #35 Chiroptera ANCESTRAL SPECIES 34 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000164778 ENSGT00900000140957.B ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00900000140957.A.a.b ENSGT00940000163717 ENSGT00940000161790 #36 ENSGT00940000153130.a.a.a.c.a ##35 Microchiroptera ANCESTRAL SPECIES 29 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000164778 ENSGT00900000140957.B ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00900000140957.C ENSGT00940000161790 #36 ENSGT00940000153130.a.a.a.c.a ##35 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000153073.b.b.b.a.a.e #34 Greater horseshoe bat MODERN SPECIES 24 C14orf93 (ENSRFEG00010001313) #10 AJUBA (ENSRFEG00010001220) #11 PRMT5 (ENSRFEG00010001074) #13 RBM23 (ENSRFEG00010000986) #14 REM2 (ENSRFEG00010000938) LRP10 (ENSRFEG00010000869) #15 MMP14 (ENSRFEG00010000831) #16 MRPL52 (ENSRFEG00010000802) #17 SLC7A7 (ENSRFEG00010000765) #18 OXA1L (ENSRFEG00010000726) #19 ENSRFEG00010000700 ENSRFEG00010000692 ENSRFEG00010000679 ENSRFEG00010000659 #20 ABHD4 (ENSRFEG00010000649) #21 DAD1 (ENSRFEG00010000633) #22 ENSRFEG00010000621 #23 ENSRFEG00010000611 ENSRFEG00010000606 ENSRFEG00010000597 ENSRFEG00010000592 ENSRFEG00010000578 TRDV3 (ENSRFEG00010000569) TRDC (ENSRFEG00010000556) #27 ENSRFEG00010000546 TRAV41 (ENSRFEG00010000523) ENSRFEG00010000509 TRAV26-2 (ENSRFEG00010000503) ENSRFEG00010000462 #32 ENSRFEG00010000443 #33 ENSRFEG00010000428 #32 Microbat MODERN SPECIES 1234 C14orf93 (ENSMLUG00000014274) #10 AJUBA (ENSMLUG00000012944) #11 HAUS4 (ENSMLUG00000012934) #12 PRMT5 (ENSMLUG00000012929) #13 RBM23 (ENSMLUG00000012923) #14 REM2 (ENSMLUG00000012919) LRP10 (ENSMLUG00000012915) #15 MMP14 (ENSMLUG00000012908) #16 MRPL52 (ENSMLUG00000012904) #17 SLC7A7 (ENSMLUG00000012899) #18 OXA1L (ENSMLUG00000012893) #19 ENSMLUG00000028266 ENSMLUG00000023468 ABHD4 (ENSMLUG00000003815) #21 ENSMLUG00000027893 DAD1 (ENSMLUG00000003801) #22 ENSMLUG00000003366 #23 TRDV3 (ENSMLUG00000025256) ENSMLUG00000027186 ENSMLUG00000025096 TRAV41 (ENSMLUG00000025529) ENSMLUG00000030412 ENSMLUG00000025899 #30 ENSMLUG00000026867 ENSMLUG00000025130 ENSMLUG00000029316 #36 ENSMLUG00000029296 #34 TRAV29DV5 (ENSMLUG00000030079) #32 TRDV1 (ENSMLUG00000003798) #36 TRAV26-1 (ENSMLUG00000027997) TRAV24 (ENSMLUG00000027374) Megabat MODERN SPECIES 6843 ABHD4 (ENSPVAG00000010279) #21 DAD1 (ENSPVAG00000010278) #22 Equus ANCESTRAL SPECIES 45 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B.e.a.b ENSGT01090000260011.B.f ENSGT01090000260011.B.e.a.a ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT01100000264510 ENSGT01070000257199 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000164778 ENSGT00940000160147.a ENSGT00940000153130.a.b.a.a.b #35 ENSGT00940000162840.C #31 ENSGT00940000160147.b ENSGT00940000153073.b.b.b.a.a.g.a.a #34 ENSGT00940000163717 ENSGT00940000160183.c.c.c ##29 ENSGT00940000163502.b Donkey MODERN SPECIES 11 HAUS4 (ENSEASG00005011698) #12 PRMT5 (ENSEASG00005011697) #13 RBM23 (ENSEASG00005011696) #14 REM2 (ENSEASG00005011695) LRP10 (ENSEASG00005011693) #15 MMP14 (ENSEASG00005011691) #16 MRPL52 (ENSEASG00005011690) #17 SLC7A7 (ENSEASG00005011689) #18 OXA1L (ENSEASG00005011687) #19 ENSEASG00005031145 ENSEASG00005036585 ENSEASG00005035945 ENSEASG00005024128 ENSEASG00005025894 ABHD4 (ENSEASG00005011678) #21 ENSEASG00005011676 #22 ENSEASG00005027981 ENSEASG00005033431 ENSEASG00005037177 ENSEASG00005024428 ENSEASG00005011674 ENSEASG00005034676 #23 TRDV3 (ENSEASG00005026598) TRDC (ENSEASG00005011672) #27 ENSEASG00005037114 ENSEASG00005011671 ENSEASG00005028886 ENSEASG00005011670 ENSEASG00005024055 #35 ENSEASG00005027396 #31 ENSEASG00005011598 #34 Horse MODERN SPECIES AJUBA (ENSECAG00000009971) #11 PSMB11 (ENSECAG00000004095) #8 HAUS4 (ENSECAG00000007197) #12 PRMT5 (ENSECAG00000014516) #13 RBM23 (ENSECAG00000009910) #14 REM2 (ENSECAG00000009873) LRP10 (ENSECAG00000022955) #15 MMP14 (ENSECAG00000008351) #16 MRPL52 (ENSECAG00000000019) #17 SLC7A7 (ENSECAG00000001058) #18 OXA1L (ENSECAG00000015615) #19 ENSECAG00000047830 OR6E1 (ENSECAG00000058804) ENSECAG00000051878 ABHD4 (ENSECAG00000002199) #21 DAD1 (ENSECAG00000000577) #22 ENSECAG00000035225 ENSECAG00000032324 TRDV3 (ENSECAG00000057927) TRDC (ENSECAG00000028590) #27 ENSECAG00000042547 ENSECAG00000054130 ENSECAG00000032312 ENSECAG00000016803 ENSECAG00000014595 #35 TRAV34 (ENSECAG00000028919) #31 ENSECAG00000000419 ENSECAG00000059361 #34 ENSECAG00000037353 #34 TRAV24 (ENSECAG00000034386) ENSECAG00000013643 ##29 Artiodactyla ANCESTRAL SPECIES 3 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00940000170768 ENSGT01080000258109 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000164778 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000160183.d.a #29 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 Suina ANCESTRAL SPECIES 30 ENSGT00940000157841.p #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000166072 #30 Chacoan peccary MODERN SPECIES 884 ENSCWAG00000020473 #9 C14orf93 (ENSCWAG00000020482) #10 AJUBA (ENSCWAG00000020496) #11 HAUS4 (ENSCWAG00000020523) #12 PRMT5 (ENSCWAG00000020565) #13 RBM23 (ENSCWAG00000020740) #14 REM2 (ENSCWAG00000020754) LRP10 (ENSCWAG00000020768) #15 MMP14 (ENSCWAG00000020783) #16 MRPL52 (ENSCWAG00000020797) #17 SLC7A7 (ENSCWAG00000020831) #18 OXA1L (ENSCWAG00000020858) #19 ENSCWAG00000020864 OR6J1 (ENSCWAG00000020867) ABHD4 (ENSCWAG00000020875) #21 DAD1 (ENSCWAG00000020889) #22 ENSCWAG00000020911 #27 TRDV3 (ENSCWAG00000020957) ENSCWAG00000003910 TRAV26-1 (ENSCWAG00000003960) TRAV29DV5 (ENSCWAG00000003985) #32 ENSCWAG00000004010 #33 ENSCWAG00000004027 ##31 ENSCWAG00000004049 #36 ENSCWAG00000004063 ENSCWAG00000004084 ##35 ENSCWAG00000004097 #36 ENSCWAG00000004116 ENSCWAG00000004140 ENSCWAG00000004163 #36 ENSCWAG00000004174 Pig MODERN SPECIES 15 C14orf93 (ENSSSCG00000031452) #10 AJUBA (ENSSSCG00000029201) #11 HAUS4 (ENSSSCG00000033178) #12 PRMT5 (ENSSSCG00000030045) #13 RBM23 (ENSSSCG00000026700) #14 REM2 (ENSSSCG00000031874) LRP10 (ENSSSCG00000034465) #15 MMP14 (ENSSSCG00000002039) #16 MRPL52 (ENSSSCG00000002040) #17 SLC7A7 (ENSSSCG00000002041) #18 OXA1L (ENSSSCG00000002042) #19 ENSSSCG00000059245 ENSSSCG00000056092 OR6J1 (ENSSSCG00000002052) ABHD4 (ENSSSCG00000002051) #21 DAD1 (ENSSSCG00000002050) #22 ENSSSCG00000033721 ENSSSCG00000046912 ENSSSCG00000046018 ENSSSCG00000031641 ENSSSCG00000041741 ENSSSCG00000031495 ENSSSCG00000056250 #27 ENSSSCG00000054641 ENSSSCG00000049724 #30 ENSSSCG00000022057 ENSSSCG00000002062 ENSSSCG00000042643 ENSSSCG00000056989 ENSSSCG00000049023 #36 ENSSSCG00000058937 #36 Artiodactyla_a ANCESTRAL SPECIES 2 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00940000170768 ENSGT01080000258109 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000164778 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000160183.d.a #29 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 Camelidae ANCESTRAL SPECIES 41 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT01100000266667 ENSGT00730000111639 ENSGT00940000165951 ENSGT00550000075201 #27 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00900000140957.A.b ENSGT00940000153130.a.b.a.b #33 Arabian camel MODERN SPECIES 32 AJUBA (ENSCDRG00005008424) #11 HAUS4 (ENSCDRG00005008205) #12 PRMT5 (ENSCDRG00005007871) #13 ENSCDRG00005007748 #14 REM2 (ENSCDRG00005007658) LRP10 (ENSCDRG00005007477) #15 MRPL52 (ENSCDRG00005007435) #17 MMP14 (ENSCDRG00005007391) #16 ENSCDRG00005007346 #17 SLC7A7 (ENSCDRG00005007288) #18 OXA1L (ENSCDRG00005007183) #19 ENSCDRG00005007166 ENSCDRG00005007140 ENSCDRG00005007127 ABHD4 (ENSCDRG00005007100) #21 DAD1 (ENSCDRG00005007062) #22 ENSCDRG00005007041 #23 ENSCDRG00005007031 ENSCDRG00005007017 ENSCDRG00005007000 ENSCDRG00005006988 TRDV3 (ENSCDRG00005006953) TRDV2 (ENSCDRG00005006905) ENSCDRG00005006880 ENSCDRG00005006834 ENSCDRG00005006699 #27 TRAV36DV7 (ENSCDRG00005006652) #29 ENSCDRG00005006609 TRAV26-2 (ENSCDRG00005006574) TRAV29DV5 (ENSCDRG00005006547) #32 ENSCDRG00005006536 Alpaca MODERN SPECIES 308 SLC7A7 (ENSVPAG00000005339) #18 OXA1L (ENSVPAG00000005338) #19 ABHD4 (ENSVPAG00000005336) #21 DAD1 (ENSVPAG00000005335) #22 Artiodactyla_b ANCESTRAL SPECIES 2 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00940000170768 ENSGT01080000258109 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000164778 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000160183.d.a #29 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 Cetacea ANCESTRAL SPECIES 2 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00940000170768 ENSGT00730000111639 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072 #30 ENSGT00940000153130.a.b.a.a.b #35 ENSGT00940000153073.b.b.b.b.z.a ##34 ENSGT00940000160183.c ##29 ENSGT00940000153073.a ##34 ENSGT00940000163398 ENSGT00940000153073.b.a ##34 ENSGT00940000153073.b.b.b.b.`b ##34 ENSGT00940000153130.a.a.b ##35 Odontoceti ANCESTRAL SPECIES 2 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00940000170768 ENSGT00730000111639 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072.a #30 ENSGT00940000166072.b #30 ENSGT00940000153130.a.b.a.a.b #35 ENSGT00940000153073.b.b.b.b.z.a ##34 ENSGT00940000160183.c ##29 ENSGT00940000153073.a ##34 ENSGT00940000163398 ENSGT00940000153073.b.a ##34 ENSGT00940000154455.b.f Sperm whale MODERN SPECIES 2 SLC22A17 (ENSPCTG00005014829) EFS (ENSPCTG00005014279) IL25 (ENSPCTG00005014086) CMTM5 (ENSPCTG00005013494) MYH6 (ENSPCTG00005012858) C11H14orf93 (ENSPCTG00005012309) #10 ENSPCTG00005012017 #11 ENSPCTG00005011944 #11 ENSPCTG00005011928 HAUS4 (ENSPCTG00005011698) #12 PRMT5 (ENSPCTG00005010346) #13 RBM23 (ENSPCTG00005009497) #14 REM2 (ENSPCTG00005009127) LRP10 (ENSPCTG00005008733) #15 ABHD4 (ENSPCTG00005008569) #21 DAD1 (ENSPCTG00005008536) #22 ENSPCTG00005008496 ENSPCTG00005008402 ENSPCTG00005008314 ENSPCTG00005008242 ENSPCTG00005008075 #23 ENSPCTG00005008021 ENSPCTG00005007941 #30 ENSPCTG00005007885 #30 ENSPCTG00005007799 #35 ENSPCTG00005007710 ##34 TRAV20 (ENSPCTG00005007665) ##29 TRAV17 (ENSPCTG00005007652) ENSPCTG00005007618 ##34 ENSPCTG00005007590 ##35 ENSPCTG00005007577 ##35 Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141.i #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072.a #30 ENSGT00940000153073.b.b.b.b.z.a ##34 ENSGT00940000153073.a ##34 ENSGT00940000163398 ENSGT00940000153073.b.a ##34 ENSGT00940000154455.b.f ENSGT00940000163052 ENSGT00940000159469.a.b ENSGT00740000116858 ENSGT00940000163275 ENSGT00940000162245 Dolphin MODERN SPECIES 4841 ABHD4 (ENSTTRG00000014523) #21 DAD1 (ENSTTRG00000014522) #22 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141.i #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072.a #30 ENSGT00940000153073.b.b.b.b.z.a ##34 ENSGT00940000153073.a ##34 ENSGT00940000163398 ENSGT00940000153073.b.a.j ##34 ENSGT00940000154455.b.f ENSGT00940000163052 ENSGT00940000159469.a.b ENSGT00740000116858 ENSGT00940000163275 ENSGT00940000162245 Monodontidae ANCESTRAL SPECIES 15 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141.i #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT00910000148211 #20 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT01060000251758 ENSGT00900000140957.B ENSGT00940000163224.a ENSGT00940000160147.a ENSGT00940000166072.a #30 ENSGT00940000153073.b.b.b.b.z.a ##34 ENSGT00940000153073.a ##34 ENSGT00940000163052 ENSGT00940000159469.a.b ENSGT00740000116858 ENSGT00940000163275 ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888 Beluga whale MODERN SPECIES 44 PSMB11 (ENSDLEG00000019969) #8 PSMB5 (ENSDLEG00000019970) #9 CUNH14orf93 (ENSDLEG00000019974) #10 AJUBA (ENSDLEG00000019978) #11 HAUS4 (ENSDLEG00000019987) #12 PRMT5 (ENSDLEG00000019993) #13 RBM23 (ENSDLEG00000020009) #14 REM2 (ENSDLEG00000020022) LRP10 (ENSDLEG00000020034) #15 MMP14 (ENSDLEG00000020044) #16 SLC7A7 (ENSDLEG00000020052) #18 ENSDLEG00000020066 OXA1L (ENSDLEG00000020068) #19 ENSDLEG00000020073 ABHD4 (ENSDLEG00000010554) #21 DAD1 (ENSDLEG00000010565) #22 ENSDLEG00000010569 #23 ENSDLEG00000010574 ENSDLEG00000010579 ENSDLEG00000010581 TRDV2 (ENSDLEG00000010592) ENSDLEG00000010605 TRAV41 (ENSDLEG00000010617) TRAV39 (ENSDLEG00000010632) ENSDLEG00000010662 ENSDLEG00000010668 #30 Narwhal MODERN SPECIES 308 PSMB5 (ENSMMNG00015011131) #9 C14orf93 (ENSMMNG00015011104) #10 AJUBA (ENSMMNG00015011080) #11 HAUS4 (ENSMMNG00015011037) #12 ENSMMNG00015010912 #13 RBM23 (ENSMMNG00015010808) #14 REM2 (ENSMMNG00015010749) LRP10 (ENSMMNG00015010719) #15 MMP14 (ENSMMNG00015010687) #16 MRPL52 (ENSMMNG00015010642) #17 SLC7A7 (ENSMMNG00015010613) #18 OXA1L (ENSMMNG00015010592) #19 ENSMMNG00015010566 ENSMMNG00015010554 #20 ABHD4 (ENSMMNG00015010536) #21 DAD1 (ENSMMNG00015010510) #22 ENSMMNG00015010503 ENSMMNG00015010496 ENSMMNG00015010494 ENSMMNG00015010481 #23 ENSMMNG00015010465 ENSMMNG00015010449 ENSMMNG00015010435 #30 TRDV2 (ENSMMNG00015010423) ENSMMNG00015010411 #30 ENSMMNG00015010405 ##34 ENSMMNG00015010393 ##34 TRAV14DV4 (ENSMMNG00015010385) ENSMMNG00015010376 TRAV2 (ENSMMNG00015010367) OR4E2 (ENSMMNG00015010254) Vaquita MODERN SPECIES 11 CDH24 (ENSPSNG00000019630) #7 PSMB11 (ENSPSNG00000019602) #8 PSMB5 (ENSPSNG00000019535) #9 C14orf93 (ENSPSNG00000019391) #10 AJUBA (ENSPSNG00000019351) #11 HAUS4 (ENSPSNG00000019326) #12 PRMT5 (ENSPSNG00000018887) #13 RBM23 (ENSPSNG00000018691) #14 REM2 (ENSPSNG00000018592) LRP10 (ENSPSNG00000018527) #15 MMP14 (ENSPSNG00000018471) #16 MRPL52 (ENSPSNG00000018228) #17 SLC7A7 (ENSPSNG00000018124) #18 OXA1L (ENSPSNG00000018044) #19 ABHD4 (ENSPSNG00000017542) #21 DAD1 (ENSPSNG00000017483) #22 ENSPSNG00000017223 ENSPSNG00000017099 #30 ENSPSNG00000017063 ##34 ENSPSNG00000017047 ENSPSNG00000016997 ##34 ENSPSNG00000016967 ENSPSNG00000016934 ##34 ENSPSNG00000016908 OR4E2 (ENSPSNG00000016023) SALL2 (ENSPSNG00000015828) METTL3 (ENSPSNG00000015776) TOX4 (ENSPSNG00000015667) RAB2B (ENSPSNG00000015559) CHD8 (ENSPSNG00000015430) SUPT16H (ENSPSNG00000015312) Blue whale MODERN SPECIES 11 PSMB11 (ENSBMSG00010010746) #8 PSMB5 (ENSBMSG00010010731) #9 C14orf93 (ENSBMSG00010010696) #10 AJUBA (ENSBMSG00010010676) #11 HAUS4 (ENSBMSG00010010635) #12 PRMT5 (ENSBMSG00010010436) #13 RBM23 (ENSBMSG00010010357) #14 REM2 (ENSBMSG00010010327) LRP10 (ENSBMSG00010010297) #15 MMP14 (ENSBMSG00010010266) #16 MRPL52 (ENSBMSG00010010235) #17 SLC7A7 (ENSBMSG00010010209) #18 OXA1L (ENSBMSG00010010184) #19 ENSBMSG00010010087 ABHD4 (ENSBMSG00010010078) #21 DAD1 (ENSBMSG00010010053) #22 ENSBMSG00010010041 ENSBMSG00010009999 #27 TRAV41 (ENSBMSG00010009961) ENSBMSG00010009948 #30 ENSBMSG00010009934 #29 ENSBMSG00010009925 ##34 TRAV20 (ENSBMSG00010009912) ##29 ENSBMSG00010009903 ##34 TRAV17 (ENSBMSG00010009898) ENSBMSG00010009887 ##34 ENSBMSG00010009878 ##35 ENSBMSG00010009869 ##35 ENSBMSG00010009852 ##35 TRAV10 (ENSBMSG00010009843) ENSBMSG00010009837 Pecora ANCESTRAL SPECIES 6 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B.m ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000163708.d ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888 ENSGT00940000153886.a.a.k.b.a ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A ENSGT00940000153402.d.b ENSGT01100000263494.a.b.b.a ENSGT00400000023212 ENSGT00940000161408 ENSGT00940000161599 ENSGT00940000164606 ENSGT00940000163695 Percora_a ANCESTRAL SPECIES 8 ENSGT00940000162200 #8 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B.m ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000163708.d ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888 ENSGT00940000153886.a.a.k.b.a ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A ENSGT00940000153402.d.b ENSGT01100000263494.a.b.b.a ENSGT00400000023212 ENSGT00940000161408 ENSGT00940000161599 ENSGT00940000164606 ENSGT00940000163695 Siberian musk deer MODERN SPECIES 71 RBM23 (ENSMMSG00000003104) #14 REM2 (ENSMMSG00000003202) LRP10 (ENSMMSG00000003220) #15 MMP14 (ENSMMSG00000003242) #16 MRPL52 (ENSMMSG00000003274) #17 SLC7A7 (ENSMMSG00000003307) #18 OXA1L (ENSMMSG00000003331) #19 ENSMMSG00000003356 ENSMMSG00000003366 ENSMMSG00000003376 ENSMMSG00000003399 ENSMMSG00000003410 ENSMMSG00000003418 ENSMMSG00000003428 ABHD4 (ENSMMSG00000003438) #21 DAD1 (ENSMMSG00000003453) #22 ENSMMSG00000003477 TRDV3 (ENSMMSG00000003515) ENSMMSG00000003520 #27 TRDV2 (ENSMMSG00000003533) ENSMMSG00000003541 #30 ENSMMSG00000003561 ##31 ENSMMSG00000003570 #32 ENSMMSG00000003577 ENSMMSG00000003582 #32 ENSMMSG00000003592 #32 ENSMMSG00000003604 #33 ENSMMSG00000003616 ENSMMSG00000003629 ENSMMSG00000003639 #36 ENSMMSG00000003645 Bovidae ANCESTRAL SPECIES 7 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B.m.b ENSGT01090000260011.B.m.a ENSGT01090000260011.B.n ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000163708.d ENSGT01080000258109 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000164778 ENSGT00940000166072 #30 ENSGT00940000160183.d.a #29 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b.c #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000162998.a ENSGT00900000140957.A.a.b.s.a.b.c.a ENSGT00940000161790.c.a.a.b #36 ENSGT00900000140957.A.a.b.s.a.a.a Bovinae ANCESTRAL SPECIES 33 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B.m.b.b ENSGT01090000260011.B.m.a ENSGT01090000260011.B.n ENSGT00390000006178.s.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000163708.d ENSGT00980000201440 ENSGT01060000251169 ENSGT01080000258412 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000164778 ENSGT00940000153130.a.b.b.b ##35 ENSGT00940000166072.c.a #30 Bos ANCESTRAL SPECIES 31 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B.m.b.b ENSGT01090000260011.B.m.a.a.b ENSGT01090000260011.B.m.b.a ENSGT01090000260011.B.m.a.a.a ENSGT01090000260011.B.n ENSGT00390000006178.s.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000163708.d ENSGT00980000201440 ENSGT01060000251169 ENSGT00940000153130.a.b.b.b ##35 ENSGT00940000166072.c.a #30 ENSGT00940000153130.a.a.a.c.b.d #32 ENSGT00900000140957.A.b.d ENSGT00940000153130.a.a.a.c.b.c.c.b #32 ENSGT00900000140957.A.b.c ENSGT00940000153130.a.a.a.c.b.c.d #32 ENSGT00940000153130.a.b.a.b #33 ENSGT00940000162998.a.f ENSGT00940000161790.d.b #36 ENSGT00940000153073.b.b.b.a.a.d #34 ENSGT00940000161790.c.a.a.b.a.a #36 Bos_a ANCESTRAL SPECIES 40 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B.n ENSGT01090000260011.B.m.a.a.b ENSGT00390000006178.s.b ENSGT00950000183087.A.a.a.a.b.a ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00980000201440 ENSGT01060000251169 Domestic yak MODERN SPECIES 2 HAUS4 (ENSBGRG00000005108) #12 PRMT5 (ENSBGRG00000004439) #13 RBM23 (ENSBGRG00000004216) #14 REM2 (ENSBGRG00000004119) LRP10 (ENSBGRG00000004081) #15 MMP14 (ENSBGRG00000004010) #16 MRPL52 (ENSBGRG00000003895) #17 SLC7A7 (ENSBGRG00000003777) #18 OXA1L (ENSBGRG00000003716) #19 ENSBGRG00000003690 ENSBGRG00000003678 ENSBGRG00000003650 ENSBGRG00000003626 ENSBGRG00000008380 ABHD4 (ENSBGRG00000008271) #21 DAD1 (ENSBGRG00000008204) #22 ENSBGRG00000008175 ENSBGRG00000008164 ENSBGRG00000008157 ENSBGRG00000008146 ENSBGRG00000008096 TRDC (ENSBGRG00000008065) #27 ENSBGRG00000008054 TRDV2 (ENSBGRG00000008028) ENSBGRG00000008013 ENSBGRG00000008000 #30 ENSBGRG00000007987 #30 ENSBGRG00000007977 #35 ENSBGRG00000007946 #32 ENSBGRG00000007933 ENSBGRG00000007915 #32 Wild yak MODERN SPECIES 723 C14orf93 (ENSBMUG00000018246) #10 AJUBA (ENSBMUG00000018267) #11 HAUS4 (ENSBMUG00000018324) #12 PRMT5 (ENSBMUG00000018509) #13 RBM23 (ENSBMUG00000018668) #14 REM2 (ENSBMUG00000018707) LRP10 (ENSBMUG00000018763) #15 MMP14 (ENSBMUG00000018824) #16 MRPL52 (ENSBMUG00000018880) #17 SLC7A7 (ENSBMUG00000018917) #18 OXA1L (ENSBMUG00000018974) #19 ENSBMUG00000018990 ENSBMUG00000019005 ENSBMUG00000019015 ABHD4 (ENSBMUG00000019028) #21 DAD1 (ENSBMUG00000019046) #22 ENSBMUG00000019081 ENSBMUG00000019107 ENSBMUG00000019123 ENSBMUG00000019142 ENSBMUG00000019162 ENSBMUG00000019180 #27 ENSBMUG00000019192 Bos_b ANCESTRAL SPECIES 28 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B.m.b.b ENSGT01090000260011.B.m.a.a.b ENSGT01090000260011.B.m.b.a ENSGT01090000260011.B.m.a.a.a ENSGT01090000260011.B.n ENSGT00390000006178.s.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000163708.d ENSGT00980000201440 ENSGT01080000258412 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000164778 ENSGT00940000165763.d.a ENSGT00940000166072.c.a.a #30 ENSGT00940000166072.c.a.b #30 ENSGT00940000153130.a.a.a.c.b.d #32 ENSGT00900000140957.A.b.d ENSGT00940000153130.a.a.a.c.b.c.c.b #32 ENSGT00900000140957.A.b.c ENSGT00940000153130.a.a.a.c.b.c.d #32 Hybrid Bos Indicus MODERN SPECIES 1 MMP14 (ENSBIXG00005024467) #16 MRPL52 (ENSBIXG00005024443) #17 SLC7A7 (ENSBIXG00005024321) #18 ENSBIXG00005006520 OXA1L (ENSBIXG00005024237) #19 ENSBIXG00005024155 ENSBIXG00005004126 ENSBIXG00005007079 ENSBIXG00005024084 ENSBIXG00005024078 ENSBIXG00005024069 ENSBIXG00005024043 ENSBIXG00005024036 ENSBIXG00005024022 ABHD4 (ENSBIXG00005004108) #21 DAD1 (ENSBIXG00005006908) #22 ENSBIXG00005023919 ENSBIXG00005007390 ENSBIXG00005006841 ENSBIXG00005023891 ENSBIXG00005023885 ENSBIXG00005023877 ENSBIXG00005023869 ENSBIXG00005005559 ENSBIXG00005023853 ENSBIXG00005023845 ENSBIXG00005004084 ENSBIXG00005023831 ENSBIXG00005023825 ENSBIXG00005004081 ENSBIXG00005023810 Cow MODERN SPECIES 1 PRMT5 (ENSBTAG00000010890) #13 RBM23 (ENSBTAG00000038333) #14 REM2 (ENSBTAG00000016381) LRP10 (ENSBTAG00000016378) #15 MMP14 (ENSBTAG00000014824) #16 MRPL52 (ENSBTAG00000014822) #17 SLC7A7 (ENSBTAG00000014821) #18 OXA1L (ENSBTAG00000014820) #19 OR6E1D (ENSBTAG00000052080) OR6E1B (ENSBTAG00000052423) OR6E1C (ENSBTAG00000054564) OR6E1 (ENSBTAG00000050326) OR6E1E (ENSBTAG00000051691) ENSBTAG00000009274 ABHD4 (ENSBTAG00000016658) #21 DAD1 (ENSBTAG00000019077) #22 ENSBTAG00000000432 ENSBTAG00000054785 ENSBTAG00000050828 ENSBTAG00000050128 ENSBTAG00000051261 ENSBTAG00000055197 #27 ENSBTAG00000054106 ENSBTAG00000049900 ENSBTAG00000049803 ENSBTAG00000049985 #30 ENSBTAG00000052267 ENSBTAG00000054833 ENSBTAG00000050913 ENSBTAG00000047690 ##35 ENSBTAG00000054417 American bison MODERN SPECIES 3371 RBM23 (ENSBBBG00000006214) #14 REM2 (ENSBBBG00000008315) LRP10 (ENSBBBG00000000301) #15 MMP14 (ENSBBBG00000023905) #16 MRPL52 (ENSBBBG00000023959) #17 SLC7A7 (ENSBBBG00000024018) #18 OXA1L (ENSBBBG00000024118) #19 ENSBBBG00000024134 ENSBBBG00000024137 ENSBBBG00000008981 ENSBBBG00000024153 ENSBBBG00000008646 ENSBBBG00000024170 ENSBBBG00000024178 ABHD4 (ENSBBBG00000008871) #21 DAD1 (ENSBBBG00000024198) #22 ENSBBBG00000006296 ENSBBBG00000024207 ENSBBBG00000024211 ENSBBBG00000008989 ENSBBBG00000024219 ENSBBBG00000024222 ENSBBBG00000024277 #30 ENSBBBG00000024285 ##31 ENSBBBG00000024291 #32 TRAV26-2 (ENSBBBG00000024297) ENSBBBG00000006330 #32 ENSBBBG00000024310 #33 ENSBBBG00000024315 #36 ENSBBBG00000008826 ENSBBBG00000006336 ##35 Caprinae ANCESTRAL SPECIES 30 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B.m.b ENSGT01090000260011.B.m.a ENSGT01090000260011.B.n ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000163708.d ENSGT01080000258109 ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000166072 #30 ENSGT00940000153130.a.a.a.c.b.d #32 ENSGT00940000162524.A ENSGT00940000153130.a.a.a.c.b.c #32 ENSGT00900000140957.A.a.b.t.a ENSGT00940000163717 ENSGT00940000153130.a.a.a.c.a.u ##35 ENSGT00900000140957.A.a.b.s.a.b.d ENSGT00900000140957.A.a.b.s.b.c.a ENSGT00940000153073.a.k.b.b.c.a.a ##34 Goat MODERN SPECIES 1 ENSCHIG00000024418 PSMB5 (ENSCHIG00000011511) #9 C14orf93 (ENSCHIG00000021325) #10 AJUBA (ENSCHIG00000025926) #11 HAUS4 (ENSCHIG00000019264) #12 PRMT5 (ENSCHIG00000016954) #13 REM2 (ENSCHIG00000012090) LRP10 (ENSCHIG00000003799) #15 RBM23 (ENSCHIG00000025709) #14 MMP14 (ENSCHIG00000011010) #16 MRPL52 (ENSCHIG00000014047) #17 SLC7A7 (ENSCHIG00000022436) #18 OXA1L (ENSCHIG00000022345) #19 ENSCHIG00000013184 ABHD4 (ENSCHIG00000005601) #21 DAD1 (ENSCHIG00000017326) #22 ENSCHIG00000012503 TRDC (ENSCHIG00000024517) #27 TRAV36DV7 (ENSCHIG00000015670) #29 TRAV26-2 (ENSCHIG00000014121) TRAV29DV5 (ENSCHIG00000014189) #32 ENSCHIG00000012575 ENSCHIG00000006374 ENSCHIG00000013268 ENSCHIG00000017647 ##34 ENSCHIG00000014547 ENSCHIG00000012600 ENSCHIG00000007939 ENSCHIG00000013389 ENSCHIG00000017339 ENSCHIG00000025281 Rambouillet Sheep MODERN SPECIES 23 C14orf93 (ENSOARG00020017179) #10 AJUBA (ENSOARG00020017465) #11 HAUS4 (ENSOARG00020017603) #12 PRMT5 (ENSOARG00020017830) #13 RBM23 (ENSOARG00020019058) #14 REM2 (ENSOARG00020019163) LRP10 (ENSOARG00020019221) #15 MMP14 (ENSOARG00020009862) #16 MRPL52 (ENSOARG00020010106) #17 SLC7A7 (ENSOARG00020010417) #18 OXA1L (ENSOARG00020010686) #19 ENSOARG00020010800 ENSOARG00020010842 ENSOARG00020010895 ABHD4 (ENSOARG00020011057) #21 DAD1 (ENSOARG00020011202) #22 ENSOARG00020011258 ENSOARG00020011394 ENSOARG00020011409 ENSOARG00020011425 ENSOARG00020011448 TRDV3 (ENSOARG00020011466) TRDC (ENSOARG00020011494) #27 TRDV2 (ENSOARG00020011567) ENSOARG00020011603 #30 ENSOARG00020011623 #32 TRAV26-2 (ENSOARG00020011648) ENSOARG00020011683 #32 ENSOARG00020011730 ##34 ENSOARG00020011757 ##35 ENSOARG00020011792 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 28 ENSCHYG00000024022 ANAPC11 (ENSCHYG00000024045) ENSCHYG00000024063 P4HB (ENSCHYG00000024081) PPP1R27 (ENSCHYG00000024219) MCRIP1 (ENSCHYG00000024250) GCGR (ENSCHYG00000024352) SLC25A10 (ENSCHYG00000024415) MRPL12 (ENSCHYG00000024470) HGS (ENSCHYG00000024504) ARL16 (ENSCHYG00000024567) CCDC137 (ENSCHYG00000024590) OXLD1 (ENSCHYG00000005913) ENSCHYG00000005931 TSPAN10 (ENSCHYG00000006021) ENSCHYG00000006202 #22 NPLOC4 (ENSCHYG00000006240) ENSCHYG00000006321 FAAP100 (ENSCHYG00000006343) FSCN2 (ENSCHYG00000006437) ACTG1 (ENSCHYG00000006481) BAHCC1 (ENSCHYG00000006566) SLC38A10 (ENSCHYG00000006821) NDUFAF8 (ENSCHYG00000006983) TEPSIN (ENSCHYG00000007009) CEP131 (ENSCHYG00000007067) PVALEF (ENSCHYG00000007265) AATK (ENSCHYG00000007314) BAIAP2 (ENSCHYG00000007498) CHMP6 (ENSCHYG00000007924) RPTOR (ENSCHYG00000008045) Yarkand deer MODERN SPECIES 3 ENSCHYG00000016436 #9 C14orf93 (ENSCHYG00000016592) #10 AJUBA (ENSCHYG00000016731) #11 HAUS4 (ENSCHYG00000016879) #12 PRMT5 (ENSCHYG00000017109) #13 RBM23 (ENSCHYG00000018246) #14 REM2 (ENSCHYG00000018358) LRP10 (ENSCHYG00000018426) #15 MMP14 (ENSCHYG00000018620) #16 SLC7A7 (ENSCHYG00000018767) #18 ENSCHYG00000018959 #17 OXA1L (ENSCHYG00000019267) #19 ENSCHYG00000019500 ENSCHYG00000019651 ABHD4 (ENSCHYG00000019707) #21 ENSCHYG00000019819 #22 ENSCHYG00000019884 TRDV3 (ENSCHYG00000020003) ENSCHYG00000009457 #27 TRDV2 (ENSCHYG00000009486) ENSCHYG00000009499 OR4E1 (ENSCHYG00000009527) OR4E2 (ENSCHYG00000009552) ENSCHYG00000009578 OR10G3 (ENSCHYG00000009604) ENSCHYG00000009619 SALL2 (ENSCHYG00000009676) METTL3 (ENSCHYG00000009777) TOX4 (ENSCHYG00000009949) ENSCHYG00000010144 CHD8 (ENSCHYG00000010268) Eulipotyphla ANCESTRAL SPECIES ENSGT00390000003324 #22 Common shrew MODERN SPECIES 2013 DAD1 (ENSSARG00000001624) #22 ENSSARG00000001615 ENSSARG00000001589 #36 Hedgehog DUPLICATION Hedgehog MODERN SPECIES 2709 DAD1 (ENSEEUG00000008180) #22 Hedgehog DUPLICATION Hedgehog MODERN SPECIES 14367 ENSEEUG00000006924 #22 Hedgehog MODERN SPECIES 15805 ENSEEUG00000001114 #22 Atlantogenata ANCESTRAL SPECIES 55 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000164778 ENSGT00900000140957.B ENSGT00940000160147.a ENSGT00940000160183.d #29 ENSGT00900000140957.C ENSGT00940000162524.A ENSGT00940000165763 ENSGT00940000162840.D ##31 ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 Xenarthra ANCESTRAL SPECIES 10 ENSGT00940000157841 #9 ENSGT00390000012708.a #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT01050000245453 ENSGT00550000075201 #27 ENSGT00940000165951 ENSGT00940000164778 ENSGT00900000140957.B ENSGT00940000160147.a ENSGT00940000160183.d #29 ENSGT00900000140957.C ENSGT00940000162524.A ENSGT00940000165763 ENSGT00940000162524.B ENSGT00940000162840.A ##31 ENSGT00940000163717 ENSGT00940000153130.a.a.a.c.a ##35 Sloth MODERN SPECIES 2332 DAD1 (ENSCHOG00000004754) #22 Armadillo MODERN SPECIES 3264 AJUBA (ENSDNOG00000045223) #11 PRMT5 (ENSDNOG00000002572) #13 RBM23 (ENSDNOG00000032457) #14 REM2 (ENSDNOG00000024210) LRP10 (ENSDNOG00000045291) #15 MMP14 (ENSDNOG00000008414) #16 MRPL52 (ENSDNOG00000032713) #17 SLC7A7 (ENSDNOG00000001129) #18 OXA1L (ENSDNOG00000001130) #19 ENSDNOG00000036263 ENSDNOG00000043711 ENSDNOG00000040673 ENSDNOG00000046715 OR6J1 (ENSDNOG00000015928) ABHD4 (ENSDNOG00000011575) #21 DAD1 (ENSDNOG00000033306) #22 ENSDNOG00000032905 #23 TRAJ18 (ENSDNOG00000044553) ENSDNOG00000030724 TRDC (ENSDNOG00000046057) #27 ENSDNOG00000030719 ENSDNOG00000048574 TRAV41 (ENSDNOG00000049608) ENSDNOG00000040273 ENSDNOG00000033466 ENSDNOG00000032752 #29 ENSDNOG00000037373 TRAV26-2 (ENSDNOG00000040277) ENSDNOG00000041554 ENSDNOG00000047983 ##35 ENSDNOG00000037515 Afrotheria ANCESTRAL SPECIES 68 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00940000165951 ENSGT00940000160147.a ENSGT00900000140957.A.b ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 Afrotheria_a ANCESTRAL SPECIES 66 ENSGT00940000157841.jb #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT00940000165951 ENSGT00940000160147.a ENSGT00900000140957.A.b ENSGT00940000153130.a.a.a.c.b #32 ENSGT00940000153130.a.b.a.b #33 Elephant MODERN SPECIES 11 AJUBA (ENSLAFG00000026749) #11 HAUS4 (ENSLAFG00000012956) #12 PRMT5 (ENSLAFG00000004859) #13 RBM23 (ENSLAFG00000018567) #14 REM2 (ENSLAFG00000002216) LRP10 (ENSLAFG00000028518) #15 MMP14 (ENSLAFG00000002214) #16 MRPL52 (ENSLAFG00000004118) #17 SLC7A7 (ENSLAFG00000004114) #18 OXA1L (ENSLAFG00000026128) #19 ENSLAFG00000028204 ENSLAFG00000029813 ENSLAFG00000032265 OR6J1 (ENSLAFG00000026476) ABHD4 (ENSLAFG00000000661) #21 DAD1 (ENSLAFG00000000667) #22 TRAC (ENSLAFG00000029692) TRDV3 (ENSLAFG00000032133) TRDV2 (ENSLAFG00000032114) ENSLAFG00000031182 TRAV26-2 (ENSLAFG00000031190) ENSLAFG00000026269 #32 ENSLAFG00000028502 ENSLAFG00000025859 ENSLAFG00000028499 #32 ENSLAFG00000029500 #33 ENSLAFG00000030305 ##34 ENSLAFG00000031696 ##35 ENSLAFG00000032770 ##34 TRAV21 (ENSLAFG00000028141) ENSLAFG00000028749 ##34 Hyrax MODERN SPECIES 11185 DAD1 (ENSPCAG00000016207) #22 Tenrec MODERN SPECIES 2597 DAD1 (ENSETEG00000006310) #22 Marsupialia ANCESTRAL SPECIES ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B.bb.a.b.a ENSGT01090000260086.A.c.a.b.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 ENSGT01030000235488 ENSGT00940000165951 ENSGT00940000164778 ENSGT00900000140957.D.a.b.b.b ENSGT00900000140957.D.a.b.b.a.a ENSGT00900000140957.D.a.b.a ENSGT00900000140957.D.b ENSGT00940000162998.a ENSGT00940000153130.a.b.d #35 ENSGT00940000153073.b.b.a.b ##34 ENSGT00940000162998.b ENSGT00940000163058 ENSGT00940000163275 Opossum MODERN SPECIES AJUBA (ENSMODG00000034930) #11 PRMT5 (ENSMODG00000005204) #13 RBM23 (ENSMODG00000024448) #14 REM2 (ENSMODG00000005212) LRP10 (ENSMODG00000005233) #15 MMP14 (ENSMODG00000005279) #16 ENSMODG00000041569 #17 ENSMODG00000005329 #18 OXA1L (ENSMODG00000005347) #19 ENSMODG00000005352 ENSMODG00000005397 ENSMODG00000005457 ENSMODG00000005467 ENSMODG00000025734 ABHD4 (ENSMODG00000005609) #21 DAD1 (ENSMODG00000005619) #22 ENSMODG00000005630 ENSMODG00000005637 ENSMODG00000046846 ENSMODG00000029578 ENSMODG00000005661 ENSMODG00000005670 ENSMODG00000042554 ENSMODG00000027352 ENSMODG00000024454 ENSMODG00000024455 ENSMODG00000041615 ENSMODG00000005680 ENSMODG00000050975 #35 ENSMODG00000043724 #30 ENSMODG00000046100 ##34 Marsupialia_b DUPLICATION Marsupialia_b ANCESTRAL SPECIES ENSGT00390000003324.a #22 Diprotodontia ANCESTRAL SPECIES ENSGT00390000003324.a #22 Diprotodontia_a ANCESTRAL SPECIES ENSGT00390000003324.a #22 Common wonbat MODERN SPECIES 1107 C14orf93 (ENSVURG00010020627) #10 AJUBA (ENSVURG00010020619) #11 HAUS4 (ENSVURG00010020603) #12 PRMT5 (ENSVURG00010020586) #13 RBM23 (ENSVURG00010020558) #14 REM2 (ENSVURG00010020549) LRP10 (ENSVURG00010020541) #15 MMP14 (ENSVURG00010020534) #16 MRPL52 (ENSVURG00010020527) #17 SLC7A7 (ENSVURG00010020520) #18 OXA1L (ENSVURG00010020513) #19 ENSVURG00010020503 ENSVURG00010020498 ENSVURG00010020494 ABHD4 (ENSVURG00010020492) #21 ENSVURG00010020482 #22 ENSVURG00010020479 ENSVURG00010020474 #23 ENSVURG00010020467 ENSVURG00010020463 ENSVURG00010020459 ENSVURG00010020457 ENSVURG00010020453 ENSVURG00010020449 ENSVURG00010020445 ENSVURG00010020443 ENSVURG00010020441 ENSVURG00010020440 ENSVURG00010020434 ENSVURG00010020427 ENSVURG00010020420 Marsupialia_b ANCESTRAL SPECIES ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B.bb.a.b.a ENSGT01090000260086.A.c.a.b.b ENSGT00390000016277.b #21 ENSGT00390000003324.b #22 ENSGT00940000160147.b ENSGT01030000235488 ENSGT00900000140957.D.a.b.a.a.a ENSGT00900000140957.D.a.b.b.b ENSGT00900000140957.D.a.b.a.a.b ENSGT00900000140957.D.a.b.b.a.a ENSGT00900000140957.D.a.b.a.b ENSGT00900000140957.B.a ENSGT00900000140957.D.b ENSGT00940000162998.a ENSGT00940000153130.a.b.d #35 ENSGT00940000153073.b.b.a.b ##34 ENSGT00940000162998.b ENSGT00940000163058 ENSGT00940000163275 Tasmanian devil MODERN SPECIES 1 RBM23 (ENSSHAG00000012932) #14 REM2 (ENSSHAG00000012846) LRP10 (ENSSHAG00000012773) #15 MMP14 (ENSSHAG00000012576) #16 ENSSHAG00000029770 #17 SLC7A7 (ENSSHAG00000012222) #18 OXA1L (ENSSHAG00000012179) #19 ENSSHAG00000020622 ENSSHAG00000011864 ENSSHAG00000031813 ENSSHAG00000030370 ENSSHAG00000021988 ENSSHAG00000030903 ENSSHAG00000010845 ABHD4 (ENSSHAG00000010507) #21 DAD1 (ENSSHAG00000010354) #22 ENSSHAG00000028106 ENSSHAG00000022618 ENSSHAG00000026835 ENSSHAG00000023697 ENSSHAG00000025868 ENSSHAG00000031452 ENSSHAG00000023376 ENSSHAG00000029458 ENSSHAG00000029367 ENSSHAG00000027471 ENSSHAG00000020747 ENSSHAG00000021022 ENSSHAG00000023071 ENSSHAG00000025236 ENSSHAG00000030476 Diprotodontia ANCESTRAL SPECIES ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B.bb.a.b.a ENSGT01090000260086.A.c.a.b.b ENSGT00390000016277.b #21 ENSGT00390000003324.b #22 ENSGT00940000160147.b ENSGT01030000235488 ENSGT00900000140957.D.a.b.a.a.a ENSGT00900000140957.D.a.b.a.a.b ENSGT00900000140957.D.a.b.b.b ENSGT00900000140957.D.a.b.b.a.a ENSGT00900000140957.D.a.b.a.b ENSGT00900000140957.B.a ENSGT00900000140957.D.b ENSGT00940000162998.a ENSGT00940000163224.a.d ENSGT00900000140957.A ENSGT00940000163507.x.a.a ENSGT00940000153073.a.q ##34 ENSGT00940000163507.x.a.b Wallaby MODERN SPECIES 3524 DAD1 (ENSMEUG00000005196) #22 Diprotodontia_a ANCESTRAL SPECIES 1 ENSGT00940000157841 #9 ENSGT00390000012708 #10 ENSGT00940000160978 #11 ENSGT00390000014634 #12 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT01090000260011.B.bb.a.b.a ENSGT01090000260086.A.c.a.b.b ENSGT00390000016277.b #21 ENSGT00390000003324.b #22 ENSGT00940000160147.b ENSGT01030000235488 ENSGT01020000230358.b ENSGT00940000165951 ENSGT00900000140957.D.a.b.a.a.a ENSGT00900000140957.D.a.b.b.b.b.a ENSGT00900000140957.D.a.b.a.a.b.a ENSGT00900000140957.D.a.b.b.b.a.a ENSGT00900000140957.D.a.b.b.b.b.b ENSGT00900000140957.D.a.b.a.a.b.b ENSGT00900000140957.D.a.b.b.b.a.b ENSGT00900000140957.D.a.b.b.a.a ENSGT00900000140957.D.a.b.a.b ENSGT00900000140957.B.a ENSGT00900000140957.D.b koala MODERN SPECIES PSMB5 (ENSPCIG00000033625) #9 C14orf93 (ENSPCIG00000027769) #10 AJUBA (ENSPCIG00000027770) #11 HAUS4 (ENSPCIG00000027771) #12 PRMT5 (ENSPCIG00000027772) #13 RBM23 (ENSPCIG00000027773) #14 REM2 (ENSPCIG00000027774) LRP10 (ENSPCIG00000027775) #15 MMP14 (ENSPCIG00000027776) #16 MRPL52 (ENSPCIG00000027777) #17 SLC7A7 (ENSPCIG00000027778) #18 OXA1L (ENSPCIG00000027779) #19 ENSPCIG00000034713 OR6J1 (ENSPCIG00000027780) ENSPCIG00000027781 #21 DAD1 (ENSPCIG00000027783) #22 ENSPCIG00000027784 ENSPCIG00000027785 ENSPCIG00000027787 ENSPCIG00000035385 ENSPCIG00000035739 ENSPCIG00000027795 ENSPCIG00000027798 ENSPCIG00000027794 ENSPCIG00000023447 ENSPCIG00000031136 ENSPCIG00000023446 ENSPCIG00000007376 ENSPCIG00000027801 ENSPCIG00000027805 ENSPCIG00000027806 Common wonbat MODERN SPECIES 297 ENSVURG00010019874 #22 Platypus MODERN SPECIES 4 CDH24 (ENSOANG00000041564) #7 PSMB11 (ENSOANG00000004543) #8 PSMB5 (ENSOANG00000004542) #9 C14orf93 (ENSOANG00000010719) #10 ENSOANG00000010720 #11 HAUS4 (ENSOANG00000010721) #12 PRMT5 (ENSOANG00000008909) #13 RBM23 (ENSOANG00000038905) #14 REM2 (ENSOANG00000003911) LRP10 (ENSOANG00000003912) #15 MMP14 (ENSOANG00000003915) #16 ENSOANG00000046741 SLC7A7 (ENSOANG00000010722) #18 OXA1L (ENSOANG00000010724) #19 ABHD4 (ENSOANG00000010726) #21 DAD1 (ENSOANG00000041339) #22 TRDV3 (ENSOANG00000010728) ENSOANG00000010727 ENSOANG00000036084 ENSOANG00000010729 ENSOANG00000036905 ENSOANG00000042446 ENSOANG00000009886 ENSOANG00000010730 ENSOANG00000010750 ENSOANG00000010752 ENSOANG00000049059 #35 ENSOANG00000010738 ENSOANG00000047627 ENSOANG00000010734 ENSOANG00000050866 Sauria ANCESTRAL SPECIES 36 ENSGT00390000005996 ENSGT00940000160537 ENSGT00500000044922 ENSGT00390000001141 #13 ENSGT00940000162546 #14 ENSGT00940000160062 ENSGT00940000160783 #15 ENSGT00940000157808 #16 ENSGT00390000005763 #17 ENSGT00940000160134 #18 ENSGT00530000063506.B #19 ENSGT00940000163076 ENSGT00940000162793.a ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00960000186967 ENSGT00940000163058 ENSGT00940000163275 ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888 ENSGT00940000153886.a.a ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A ENSGT01100000263537.a ENSGT00940000153402 ENSGT00390000000337 ENSGT00960000190002 Lepidosauria ANCESTRAL SPECIES 106 ENSGT01030000234536.b.a.b.b.b.a ENSGT01050000244936.d ENSGT00940000163847.e.a.b ENSGT01030000234536.a.d.b.a ENSGT00940000163847.e.b ENSGT01030000234536.a.d.a.a ENSGT00940000163847.f ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147 ENSGT00940000154455 ENSGT00940000153073.f #34 ENSGT00940000162998 ENSGT00940000163224.b ENSGT00940000163058.a ENSGT00940000163058.b ENSGT00940000163275 ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888 ENSGT00940000153886.a.a ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A Episquamata ANCESTRAL SPECIES 5 ENSGT01030000234536.b.a.b.b.b.a ENSGT01050000244936.d.t.a ENSGT00940000163847.e.a.b ENSGT01030000234536.a.d.b.a.a.a.b ENSGT01030000234536.a.d.a.a.a.b.a ENSGT00940000163847.e.b ENSGT01030000234536.a.d.a.a.a.b.b.b.b ENSGT00940000163847.f ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000153073.f.a.a.b.a #34 ENSGT01030000235661 ENSGT00940000163058.a ENSGT00940000163058.b ENSGT00940000163275 ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888.`b.a ENSGT00940000153886.a.a ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A.c ENSGT01100000263537.a ENSGT00940000153402 ENSGT00940000153118.db.b Laterata ANCESTRAL SPECIES 24 ENSGT01090000260011.A.b.a.b ENSGT01090000260011.A.b.a.a ENSGT01090000260086.B.d.a.a.a ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147 ENSGT00940000153073.f.a.b #34 ENSGT00940000162998 ENSGT00940000163224.b ENSGT00960000189404 ENSGT01050000244869.a.a.b.i ENSGT01050000244869.a.a.a.a.b ENSGT01050000244869.a.a.a.a.a.b.c ENSGT01050000244869.a.a.a.a.a.a ENSGT01050000244869.a.a.a.a.a.b.d ENSGT00940000163058.a ENSGT00940000163058.b ENSGT00940000163275 ENSGT00940000162245 ENSGT00550000075058 Argentine black and white tegu MODERN SPECIES 38 ENSSMRG00000004894 ENSSMRG00000004899 ENSSMRG00000004902 ENSSMRG00000004906 ENSSMRG00000004910 ENSSMRG00000004914 ENSSMRG00000004915 ENSSMRG00000004938 ENSSMRG00000004961 ENSSMRG00000004963 ENSSMRG00000004967 ENSSMRG00000004971 ENSSMRG00000004974 OR6J1 (ENSSMRG00000004977) ABHD4 (ENSSMRG00000004979) #21 DAD1 (ENSSMRG00000004984) #22 ENSSMRG00000004987 ENSSMRG00000005053 ENSSMRG00000005062 #34 ENSSMRG00000005065 #34 ENSSMRG00000005071 #34 TRAV18 (ENSSMRG00000005076) ENSSMRG00000005082 ENSSMRG00000005087 ENSSMRG00000005089 ENSSMRG00000005094 ENSSMRG00000005100 ENSSMRG00000005148 ENSSMRG00000005151 ENSSMRG00000005153 ENSSMRG00000005158 Common wall lizard MODERN SPECIES 4 ENSPMRG00000020397 ENSPMRG00000020391 ENSPMRG00000020387 ENSPMRG00000020385 ENSPMRG00000020382 ENSPMRG00000020379 ENSPMRG00000020376 ENSPMRG00000020373 ENSPMRG00000020371 ENSPMRG00000020369 ENSPMRG00000020363 ENSPMRG00000014164 ENSPMRG00000014163 OR6J1 (ENSPMRG00000014157) ABHD4 (ENSPMRG00000014142) #21 DAD1 (ENSPMRG00000014132) #22 ENSPMRG00000014114 ENSPMRG00000014101 #34 ENSPMRG00000014096 ENSPMRG00000014093 ENSPMRG00000014087 ENSPMRG00000014081 ENSPMRG00000014077 #34 ENSPMRG00000014069 ENSPMRG00000014059 #34 ENSPMRG00000014049 #34 ENSPMRG00000014041 #34 ENSPMRG00000014037 ENSPMRG00000014028 ENSPMRG00000014018 ENSPMRG00000014013 Toxicofera ANCESTRAL SPECIES 56 ENSGT01030000234536.a.d.a.a.a.b.a ENSGT00940000163847.e.b ENSGT01030000234536.a.d.a.a.a.b.b.b.b ENSGT00940000163847.f ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000153073.f.a.a.b.a #34 ENSGT00940000171353 ENSGT00940000154455 ENSGT00940000153073.f.b.b #34 ENSGT00940000162998.l.a ENSGT01030000235661 ENSGT00940000162998.l.b ENSGT00940000153073.f.a.a.b.b #34 ENSGT00940000153073.f.b.a #34 ENSGT00940000153073.f.a.a.a #34 ENSGT00960000189462 ENSGT00990000208783 ENSGT00960000189404 ENSGT01050000244869.a.a.b.i ENSGT01050000244869.a.a.a.a.b Elapidae ANCESTRAL SPECIES 53 ENSGT01090000260086.D.e ENSGT01090000260086.D.f.a.b ENSGT00960000190006 ENSGT01090000260011.A.b.a.a ENSGT01090000260011.A.b.a.b.b ENSGT01090000260011.A.b.a.b.a ENSGT01090000260011.A.b.b.c ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000153073.f.a.a.b.a #34 ENSGT00960000189462.a.a.a.b.b ENSGT00960000189462.a.a.b ENSGT00940000153073.f.a.a.a.a.b.a #34 ENSGT00960000189462.a.a.a.b.a ENSGT01090000260086.D.f.a.a.c.a ENSGT00960000189404.a.a ENSGT00960000189404.a.b.a ENSGT00960000189404.b ENSGT01050000244869.a.a.b.i ENSGT01050000244869.a.a.a.a.b ENSGT01050000244869.a.a.a.a.a.b.b.b ENSGT01050000244869.a.a.a.a.a.b.a.a ENSGT01050000244869.a.a.a.a.a.a Elapidae_a ANCESTRAL SPECIES 170 ENSGT01090000260011.A.b.b.c ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00960000189462.a.a.a.a.a ENSGT00960000189462.a.a.a.b.b ENSGT00960000189462.a.a.b ENSGT00940000153073.f.a.a.a.a.b.a #34 ENSGT00960000189462.a.a.a.b.a ENSGT01090000260086.D.f.a.a.c.a Acanthophiinae ANCESTRAL SPECIES 112 ENSGT01090000260086.D.e ENSGT01090000260086.D.f.a.b ENSGT00960000190006 ENSGT01090000260086.D.f.a.a.c.b.a ENSGT01090000260086.D.f.a.a.c.b.b ENSGT00950000182788.a.b.b.a.a.b.a.a.b.a.a.a.b.e.b ENSGT01090000260011.A.b.a.a ENSGT01090000260011.A.b.a.b.b ENSGT01090000260011.A.b.a.b.a ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00960000189462.a.a.a.a.a ENSGT00960000189462.a.a.a.b.b ENSGT00960000189462.a.a.b ENSGT00940000153073.f.a.a.a.a.a.b #34 ENSGT00960000189462.a.b ENSGT00940000153073.f.a.a.a.b #34 ENSGT00940000153073.f.a.a.a.a.a.a.a #34 ENSGT00940000153073.f.a.a.a.a.b.a #34 ENSGT00960000189462.a.a.a.b.a ENSGT01090000260086.D.f.a.a.c.a Mainland tiger snake MODERN SPECIES 646 ABHD4 (ENSNSUG00000010124) #21 DAD1 (ENSNSUG00000010122) #22 Eastern brown snake MODERN SPECIES 150 ENSPTXG00000015198 ENSPTXG00000015195 ENSPTXG00000015193 ENSPTXG00000015192 ENSPTXG00000015187 ENSPTXG00000015183 ENSPTXG00000015182 ENSPTXG00000015180 ENSPTXG00000015171 ENSPTXG00000015170 ENSPTXG00000015168 ENSPTXG00000015167 ABHD4 (ENSPTXG00000015165) #21 DAD1 (ENSPTXG00000015164) #22 ENSPTXG00000015162 ENSPTXG00000015161 ENSPTXG00000015160 ENSPTXG00000015158 ENSPTXG00000015156 ENSPTXG00000015154 #34 ENSPTXG00000015153 #34 ENSPTXG00000017201 #34 ENSPTXG00000017198 ENSPTXG00000017195 #34 ENSPTXG00000017192 #34 ENSPTXG00000017191 ENSPTXG00000017190 ENSPTXG00000017186 ENSPTXG00000017183 Blue-lipped sea krait MODERN SPECIES 2572 ABHD4 (ENSLLTG00000002060) #21 DAD1 (ENSLLTG00000002061) #22 ENSLLTG00000002073 Indian cobra MODERN SPECIES 337 ENSNNAG00000006201 ENSNNAG00000006186 ENSNNAG00000006171 ENSNNAG00000006150 ENSNNAG00000006124 ENSNNAG00000006104 ENSNNAG00000006088 ENSNNAG00000006073 ENSNNAG00000006067 ENSNNAG00000006058 ENSNNAG00000006048 ENSNNAG00000006021 ENSNNAG00000006012 OR6M1 (ENSNNAG00000005998) ENSNNAG00000005988 DAD1 (ENSNNAG00000005972) #22 ENSNNAG00000005946 #34 ENSNNAG00000005927 ENSNNAG00000005914 ENSNNAG00000005889 ENSNNAG00000005876 ENSNNAG00000005869 #34 ENSNNAG00000005858 #34 ENSNNAG00000005845 #34 ENSNNAG00000005826 ENSNNAG00000005811 #34 ENSNNAG00000005801 #34 ENSNNAG00000005780 ENSNNAG00000005769 ENSNNAG00000005757 ENSNNAG00000005743 Lizard MODERN SPECIES 1561 ENSACAG00000003019 #21 ENSACAG00000042123 #22 tuatara MODERN SPECIES 1339 ENSSPUG00000005731 ENSSPUG00000005759 ENSSPUG00000005780 ENSSPUG00000005793 ENSSPUG00000005815 ENSSPUG00000005828 ABHD4 (ENSSPUG00000005838) #21 DAD1 (ENSSPUG00000005843) #22 ENSSPUG00000005864 ENSSPUG00000005877 ENSSPUG00000005904 ENSSPUG00000005926 ENSSPUG00000005941 ENSSPUG00000005947 #34 ENSSPUG00000005956 #34 ENSSPUG00000005967 #34 ENSSPUG00000005975 ENSSPUG00000005981 ENSSPUG00000005993 Archelosauria ANCESTRAL SPECIES 117 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00960000186967 Cryptodira ANCESTRAL SPECIES 146 ENSGT01090000260011.B ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00960000186967 Testudinoidea ANCESTRAL SPECIES 109 ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b.db #21 ENSGT00390000003324 #22 ENSGT00960000186967 Emydidae ANCESTRAL SPECIES 183 ENSGT01090000260011.A.a.a.a ENSGT01090000260011.B ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b.db #21 ENSGT00390000003324 #22 painted turtle MODERN SPECIES 1945 ENSCPBG00000011534 #22 Three-toed box turtle MODERN SPECIES 240 ENSTMTG00000018120 ENSTMTG00000018115 OR6J1 (ENSTMTG00000018110) ENSTMTG00000018104 #21 ENSTMTG00000018095 #22 Testudinidae ANCESTRAL SPECIES 238 ENSGT00390000003324 #22 ENSGT00960000186967 Abingdon island giant tortoise MODERN SPECIES 2164 ENSCABG00000018752 #22 ENSCABG00000018754 ADAMTS9 (ENSCABG00000018760) PRICKLE2 (ENSCABG00000018764) PSMD6 (ENSCABG00000018768) ATXN7 (ENSCABG00000018772) ENSCABG00000018815 THOC7 (ENSCABG00000018816) ENSCABG00000018818 SNTN (ENSCABG00000018820) SYNPR (ENSCABG00000018824) ENSCABG00000018828 Archosauria ANCESTRAL SPECIES 192 ENSGT00390000003324 #22 ENSGT00960000186967 Aves ANCESTRAL SPECIES 90 ENSGT00390000000337 ENSGT00390000003324 #22 ENSGT00960000186967 ENSGT01030000235488 ENSGT00940000164778 ENSGT00940000163533 ENSGT00940000162998 African ostrich MODERN SPECIES 642 ENSSCUG00000009301 ITGB3 (ENSSCUG00000009297) RPRML (ENSSCUG00000009295) CRHR1 (ENSSCUG00000009290) ENSSCUG00000009289 ASIC2 (ENSSCUG00000009287) SMARCD2 (ENSSCUG00000009281) PSMC5 (ENSSCUG00000009276) FTSJ3 (ENSSCUG00000009255) ENSSCUG00000009248 ENSSCUG00000009246 OR6P1 (ENSSCUG00000009243) ENSSCUG00000009240 SDR39U1 (ENSSCUG00000009237) ENSSCUG00000009231 DAD1 (ENSSCUG00000009228) #22 ENSSCUG00000009226 ENSSCUG00000009225 ENSSCUG00000009224 ENSSCUG00000009222 ENSSCUG00000009221 ENSSCUG00000009220 Neognathae ANCESTRAL SPECIES 23 ENSGT00390000000337 ENSGT00390000003324 #22 ENSGT00960000186967 ENSGT00940000163533 ENSGT00960000189394 ENSGT00950000183192.a.b ENSGT00940000158599 ENSGT00940000157854 ENSGT00530000064085 ENSGT00390000003267 ENSGT00390000015009 ENSGT00530000063909.a ENSGT00940000159790 ENSGT01090000260005.a.a.a.b.a.a.b ENSGT00940000155685 ENSGT00390000004038 ENSGT00530000063991.a Neognathae_b ANCESTRAL SPECIES 23 ENSGT01100000263494.a.a.a.a.a.a ENSGT00390000000337 ENSGT00390000003324 #22 ENSGT00960000186967 ENSGT00940000163533 ENSGT00960000189394 ENSGT00950000183192.a.b ENSGT00940000158599 ENSGT00940000157854 ENSGT00530000064085 ENSGT00390000003267 ENSGT00390000015009 ENSGT00530000063909.a ENSGT00940000159790 ENSGT01090000260005.a.a.a.b.a.a.b ENSGT00940000155685 ENSGT00390000004038 ENSGT00530000063991.a Passeriformes ANCESTRAL SPECIES 29 ENSGT00940000155510 ENSGT00940000158142 ENSGT00940000154018.a ENSGT00390000014900.b.b.b ENSGT00940000163612 ENSGT00940000169006 ENSGT00940000157190 ENSGT01080000257365.b.a.a.b.b ENSGT00940000162777.a.b.a ENSGT01100000263494.a.a.a.a.a.a ENSGT00390000000337 ENSGT00940000165513.b.a.a ENSGT01060000248581.B.cb ENSGT01030000234551.k.d.a.b.b ENSGT01090000260011.B ENSGT00390000003324 #22 ENSGT00960000186967 ENSGT00940000163533.o.a ENSGT00960000189394 ENSGT01030000235023 ENSGT00940000162998 Great tit MODERN SPECIES 20 MEOX1 (ENSPMJG00000002425) SOST (ENSPMJG00000002465) DUSP3 (ENSPMJG00000002466) ENSPMJG00000002468 MPP3 (ENSPMJG00000002676) ENSPMJG00000002688 ENSPMJG00000002692 ENSPMJG00000002702 ENSPMJG00000002715 OR6P1 (ENSPMJG00000002836) ENSPMJG00000002856 SDR39U1 (ENSPMJG00000002862) ENSPMJG00000002864 ENSPMJG00000002865 ENSPMJG00000002866 DAD1 (ENSPMJG00000002867) #22 ENSPMJG00000002872 ENSPMJG00000002874 ENSPMJG00000002881 ENSPMJG00000002884 ENSPMJG00000002887 ENSPMJG00000002890 ENSPMJG00000002902 ENSPMJG00000002954 ENSPMJG00000002955 ENSPMJG00000002959 ENSPMJG00000002965 GTSF1 (ENSPMJG00000002968) GOSR2 (ENSPMJG00000002975) WNT9B (ENSPMJG00000002978) WNT3 (ENSPMJG00000002997) Passeriformes_d ANCESTRAL SPECIES 25 ENSGT00940000163612 ENSGT00940000157325.`b ENSGT00940000157190 ENSGT01080000257365.b.a.a.b.b ENSGT00940000162777.a.b.a ENSGT00940000154596.b.x.d ENSGT01050000244815.A.c.b.b.b ENSGT00950000182858.A.a.f ENSGT01060000248581.B.db.b.b.a ENSGT01060000248581.B.cb ENSGT00940000165513.b.a.a ENSGT01100000263494.a.a.a.a.a.a ENSGT00390000000337 ENSGT01030000234551.k.d.a.b.b ENSGT01090000260011.B ENSGT00390000003324 #22 ENSGT00960000186967 ENSGT00940000163533.o.a.a.a ENSGT00940000162998.j ENSGT01030000235023 ENSGT00940000162998.i.a.a ENSGT01090000260045.C.e.a.a.b ENSGT01030000234722.a.a.a.b.b.b.b.a.c.b.b ENSGT01030000234722.a.a.a.b.b.b.b.a.c.b.a ENSGT00950000183192.a.b ENSGT00940000158599 ENSGT00940000157854 ENSGT00530000064085 ENSGT00390000003267 ENSGT00390000015009 ENSGT00530000063909.a Passeriformes_g ANCESTRAL SPECIES 26 ENSGT00940000163612 ENSGT00940000157325.`b ENSGT00940000157190 ENSGT01080000257365.b.a.a.b.b ENSGT00940000162777.a.b.a ENSGT00940000154596.b.x.d ENSGT01050000244815.A.c.b.b.b ENSGT00950000182858.A.a.f ENSGT01060000248581.B.db.b.b.a ENSGT01100000263494.a.a.a.a.a.a ENSGT00390000000337 ENSGT00940000165513.b.a.a ENSGT01060000248581.B.cb ENSGT01030000234551.k.d.a.b.b ENSGT01090000260011.B ENSGT00390000003324 #22 ENSGT00960000186967 ENSGT00960000189332.b ENSGT00940000163533.o.a.a.a ENSGT00940000163533.o.a.b ENSGT00960000189394 ENSGT00940000162998.j ENSGT01030000235023 ENSGT00940000162998.i.a.a ENSGT01030000234722.a.a.a.b.b.b.b.a.c.a ENSGT01090000260045.C.e.a.a.b ENSGT01030000234722.a.a.a.b.b.b.b.a.c.b.b ENSGT01030000234722.a.a.a.b.b.b.b.a.d.b.a.b.b.a ENSGT01030000234722.a.a.a.b.b.b.b.a.d.b.a.b.a ENSGT00950000183192.a.b ENSGT00940000158599 Passeroidea ANCESTRAL SPECIES 32 ENSGT00390000014900.b.b.b ENSGT00940000163612 ENSGT00940000157325.`b ENSGT00940000157190 ENSGT01080000257365.b.a.a.b.b ENSGT00940000162777.a.b.a ENSGT00940000154596.b.x.d ENSGT01050000244815.A.c.b.b.b ENSGT00950000182858.A.a.f ENSGT01060000248581.B.db.b.b.a ENSGT00390000000337 ENSGT00940000165513.b.a.a ENSGT01060000248581.B.cb ENSGT01030000234551.k.d.a.b.b ENSGT01090000260011.B ENSGT00390000003324 #22 ENSGT00960000186967 Zebra finch MODERN SPECIES 20 VAT1 (ENSTGUG00000027286) RND2 (ENSTGUG00000021893) BRCA1 (ENSTGUG00000002867) NBR1 (ENSTGUG00000002873) DHX8 (ENSTGUG00000002881) ETV4 (ENSTGUG00000002922) MEOX1 (ENSTGUG00000002938) SOST (ENSTGUG00000002945) DUSP3 (ENSTGUG00000023018) ENSTGUG00000029680 MPP3 (ENSTGUG00000002948) ENSTGUG00000002970 ENSTGUG00000002976 ENSTGUG00000002987 SDR39U1 (ENSTGUG00000002997) DAD1 (ENSTGUG00000002998) #22 ENSTGUG00000028045 ENSTGUG00000024664 ENSTGUG00000003003 ENSTGUG00000003004 ENSTGUG00000025152 ENSTGUG00000003000 ENSTGUG00000027422 ENSTGUG00000003008 ENSTGUG00000024662 ENSTGUG00000025543 ENSTGUG00000003010 ENSTGUG00000021633 CWC25 (ENSTGUG00000003011) PIP4K2B (ENSTGUG00000003020) PSMB3 (ENSTGUG00000003023) Common canary MODERN SPECIES 42 DUSP3 (ENSSCAG00000006285) ENSSCAG00000006279 MPP3 (ENSSCAG00000006273) ENSSCAG00000006270 ENSSCAG00000006266 ENSSCAG00000006262 ENSSCAG00000006245 ENSSCAG00000006239 OR6P1 (ENSSCAG00000006227) SDR39U1 (ENSSCAG00000006220) ENSSCAG00000006216 ENSSCAG00000006209 ENSSCAG00000006199 ENSSCAG00000006172 ENSSCAG00000006160 DAD1 (ENSSCAG00000006155) #22 ENSSCAG00000006147 ENSSCAG00000006141 ENSSCAG00000006135 PIP4K2B (ENSSCAG00000006131) PSMB3 (ENSSCAG00000006127) PCGF2 (ENSSCAG00000006122) ENSSCAG00000006121 ENSSCAG00000006117 Flycatcher MODERN SPECIES 19 ENSFALG00000000854 ENSFALG00000000842 ENSFALG00000000865 ENSFALG00000000713 ENSFALG00000015275 ENSFALG00000000887 ENSFALG00000027660 ENSFALG00000015289 ENSFALG00000015304 ENSFALG00000026798 ENSFALG00000015309 ENSFALG00000015314 ENSFALG00000000894 ENSFALG00000000906 ENSFALG00000015320 ENSFALG00000000926 #22 ENSFALG00000024906 ENSFALG00000000931 ENSFALG00000014406 ENSFALG00000014398 ENSFALG00000027869 ENSFALG00000023530 ENSFALG00000028451 ENSFALG00000014101 ENSFALG00000028511 ENSFALG00000026546 ENSFALG00000026152 ENSFALG00000027890 ENSFALG00000024605 ENSFALG00000028417 ENSFALG00000024430 Neognathae_c ANCESTRAL SPECIES 56 ENSGT01100000263494.a.a.a.a.a.a ENSGT00390000000337 ENSGT00390000003324 #22 ENSGT00960000186967 ENSGT00940000163533.n ENSGT00940000163533.m ENSGT00960000189394 ENSGT00940000162998 ENSGT01030000235023 Kakapo MODERN SPECIES 12 ENSSHBG00005017728 ENSSHBG00005017719 ENSSHBG00005017711 ENSSHBG00005017704 ENSSHBG00005017694 EIF1 (ENSSHBG00005017683) ENSSHBG00005017676 PDK2 (ENSSHBG00005017666) ITGA3 (ENSSHBG00005017621) ENSSHBG00005017602 ENSSHBG00005017600 ENSSHBG00005017592 SDR39U1 (ENSSHBG00005017585) ENSSHBG00005017573 ENSSHBG00005017555 DAD1 (ENSSHBG00005017543) #22 ENSSHBG00005017539 ENSSHBG00005017535 ENSSHBG00005017533 ENSSHBG00005017529 ENSSHBG00005017528 ENSSHBG00005017523 ENSSHBG00005017521 ENSSHBG00005017519 ENSSHBG00005017518 MPP3 (ENSSHBG00005017516) ENSSHBG00005017515 ENSSHBG00005017514 SOST (ENSSHBG00005017512) MEOX1 (ENSSHBG00005017511) ETV4 (ENSSHBG00005017506) Golden eagle MODERN SPECIES 24 MPC1 (ENSACCG00020001249) RPS6KA2 (ENSACCG00020001205) ENSACCG00020001176 RNASET2 (ENSACCG00020001160) CEP43 (ENSACCG00020001119) CCR6 (ENSACCG00020001101) ENSACCG00020001090 ENSACCG00020001075 ENSACCG00020001063 ENSACCG00020001052 ENSACCG00020001042 SDR39U1 (ENSACCG00020001021) ENSACCG00020000995 ENSACCG00020000974 ENSACCG00020000949 DAD1 (ENSACCG00020000923) #22 ENSACCG00020000900 ENSACCG00020000886 ENSACCG00020000848 ENSACCG00020000797 ENSACCG00020000765 ENSACCG00020000708 ENSACCG00020000692 ENSACCG00020000674 ENSACCG00020000649 ENSACCG00020000611 ENSACCG00020000566 ENSACCG00020000548 ENSACCG00020000534 GTSF1 (ENSACCG00020000517) GOSR2 (ENSACCG00020000482) Galloanserae ANCESTRAL SPECIES 23 ENSGT00390000000337 ENSGT01050000244815.A.c.b.a.b ENSGT00390000003324 #22 ENSGT00960000186967 ENSGT00940000163533.l ENSGT00960000189394 ENSGT01030000234722.a.a.a.b.b.b.b.b ENSGT01030000234722.a.a.a.b.b.a ENSGT00940000156784 ENSGT00950000183192.a.b ENSGT00940000158599 ENSGT00940000157854 ENSGT00530000064085 ENSGT00390000003267 ENSGT00390000015009 ENSGT00530000063909.a ENSGT00940000159790 ENSGT01090000260005.a.a.a.b.a.a.b Anatidae ANCESTRAL SPECIES 72 ENSGT01050000244815.A.c.b.a.b ENSGT00390000003324 #22 ENSGT00960000186967 ENSGT01030000234722.a.a.a.b.b.a.a ENSGT00940000156784 ENSGT00950000183192.a.b ENSGT00940000158599 ENSGT00940000157854 ENSGT00530000064085 ENSGT00390000003267 ENSGT00390000015009 ENSGT00530000063909.a ENSGT00940000159790 ENSGT01090000260005.a.a.a.b.a.a.b ENSGT00940000155685 ENSGT00390000004038 ENSGT00530000063991.a Pink-footed goose MODERN SPECIES 219 MRC2 (ENSABRG00000009232) TLK2 (ENSABRG00000009176) ENSABRG00000009136 ENSABRG00000009050 ITGB3 (ENSABRG00000008990) ENSABRG00000008979 ENSABRG00000008957 CRHR1 (ENSABRG00000008926) ENSABRG00000008917 ENSABRG00000008859 SDR39U1 (ENSABRG00000008851) ENSABRG00000008838 ENSABRG00000008816 ENSABRG00000008774 ENSABRG00000008749 DAD1 (ENSABRG00000008739) #22 ENSABRG00000008735 Duck MODERN SPECIES 19 ENSAPLG00000014288 KCNH6 (ENSAPLG00000014145) DCAF7 (ENSAPLG00000013326) MAP3K3 (ENSAPLG00000013287) LIMD2 (ENSAPLG00000012774) ENSAPLG00000012510 ENSAPLG00000010124 CCDC47 (ENSAPLG00000011325) ENSAPLG00000025826 ENSAPLG00000010544 ENSAPLG00000023845 CDC27 (ENSAPLG00000009486) KANSL1 (ENSAPLG00000009179) ENSAPLG00000026065 ENSAPLG00000008120 DAD1 (ENSAPLG00000018549) #22 ENSAPLG00000015744 ENSAPLG00000025431 ENSAPLG00000004814 ENSAPLG00000004588 WNT9B (ENSAPLG00000004493) NSF (ENSAPLG00000003325) ENSAPLG00000022397 CCDC43 (ENSAPLG00000003028) MEIOC (ENSAPLG00000003270) GJC1 (ENSAPLG00000001944) EFTUD2 (ENSAPLG00000011036) ENSAPLG00000010875 FAM187A (ENSAPLG00000021615) ENSAPLG00000010363 DCAKD (ENSAPLG00000026366) Phasianidae ANCESTRAL SPECIES 21 ENSGT01050000244815.A.c.b.a.b ENSGT00390000003324 #22 ENSGT00960000186967 ENSGT00940000163533.l.b ENSGT00940000163533.l.a.a.b ENSGT01030000234722.a.a.a.b.b.b.b.b.e.a ENSGT01030000234722.a.a.a.b.b.b.a.b ENSGT01030000234722.a.a.a.b.b.a ENSGT00940000156784 ENSGT00950000183192.a.b ENSGT00940000158599 ENSGT00940000157854 ENSGT00530000064085 ENSGT00390000003267 ENSGT00390000015009 ENSGT00530000063909.a ENSGT00940000159790 Japanese quail MODERN SPECIES 19 ENSCJPG00005018964 DAD1 (ENSCJPG00005018967) #22 ENSCJPG00005018968 ENSCJPG00005018969 ENSCJPG00005018970 ENSCJPG00005018971 ENSCJPG00005018972 ENSCJPG00005018974 ENSCJPG00005018975 ENSCJPG00005018976 ENSCJPG00005018978 ENSCJPG00005018979 ENSCJPG00005018980 ENSCJPG00005018983 ENSCJPG00005018984 ENSCJPG00005018985 ENSCJPG00005018986 Phasianidae_b ANCESTRAL SPECIES 21 ENSGT00940000162662.s ENSGT00390000003324 #22 ENSGT00960000186967 ENSGT00940000163533.l.b ENSGT00940000163533.l.a.a.b.b ENSGT01030000234722.a.a.a.b.b.b.b.b.e.a ENSGT01030000234722.a.a.a.b.b.b.a.b.a ENSGT01030000234722.a.a.a.b.b.a ENSGT00940000156784 ENSGT00950000183192.a.b ENSGT00940000158599 ENSGT00940000157854 ENSGT00530000064085 ENSGT00390000003267 ENSGT00390000015009 ENSGT00530000063909.a ENSGT00940000159790 Chicken MODERN SPECIES 19 ENSGALG00010026370 ENSGALG00010026378 ENSGALG00010026397 ENSGALG00010022029 ENSGALG00010022054 DAD1 (ENSGALG00010022066) #22 ENSGALG00010021157 ENSGALG00010025331 ENSGALG00010025431 ENSGALG00010025436 ENSGALG00010025437 ENSGALG00010025443 ENSGALG00010025446 ENSGALG00010025454 ENSGALG00010025476 ENSGALG00010025495 ENSGALG00010025510 ENSGALG00010025534 ENSGALG00010025556 ENSGALG00010025560 ENSGALG00010025588 Turkey MODERN SPECIES 21 ENSMGAG00000000651 ENSMGAG00000000656 #22 ENSMGAG00000019102 ENSMGAG00000018953 ENSMGAG00000021655 ENSMGAG00000015631 ENSMGAG00000000685 GOSR2 (ENSMGAG00000000680) WNT9B (ENSMGAG00000020473) WNT3 (ENSMGAG00000000740) NSF (ENSMGAG00000000747) MEIOC (ENSMGAG00000000795) CCDC43 (ENSMGAG00000021096) ENSMGAG00000010488 ADAM11 (ENSMGAG00000017604) ENSMGAG00000010863 GJC1 (ENSMGAG00000010491)