Artiodactyla ANCESTRAL SPECIES 3 ENSGT00940000157841 ENSGT00390000012708 ENSGT00940000160978 #7 ENSGT00390000014634 #8 ENSGT00390000001141 #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B #18 ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00940000170768 ENSGT01080000258109 ENSGT00730000111639 #28 ENSGT00550000075201 #32 ENSGT00940000165951 #29 ENSGT00940000164778 ENSGT00900000140957.B #30 ENSGT00940000163224.a #31 ENSGT00940000160147.a ENSGT00940000166072 ENSGT00940000160183.d.a #33 ENSGT00940000162524.A #35 ENSGT00940000153130.a.a.a.c.b #36 ENSGT00940000153130.a.b.a.b ##36 Artiodactyla_a ANCESTRAL SPECIES 2 ENSGT00940000157841 ENSGT00390000012708 ENSGT00940000160978 #7 ENSGT00390000014634 #8 ENSGT00390000001141 #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B #18 ENSGT00910000148211 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00940000170768 ENSGT01080000258109 ENSGT00730000111639 #28 ENSGT00550000075201 #32 ENSGT00940000165951 #29 ENSGT00940000164778 ENSGT00900000140957.B #30 ENSGT00940000163224.a #31 ENSGT00940000160147.a ENSGT00940000166072 ENSGT00940000160183.d.a #33 ENSGT00940000162524.A #35 ENSGT00940000153130.a.a.a.c.b #36 ENSGT00940000153130.a.b.a.b ##36 Camelidae ANCESTRAL SPECIES 41 ENSGT00940000162200 ENSGT00940000157841 ENSGT00390000012708 ENSGT00940000160978 #7 ENSGT00390000014634 #8 ENSGT00390000001141 #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B #18 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT01100000266667 #26 ENSGT00730000111639 #28 ENSGT00940000165951 #29 ENSGT00550000075201 #32 ENSGT00900000140957.B #30 ENSGT00940000163224.a #31 ENSGT00940000162524.A #35 ENSGT00940000153130.a.a.a.c.b #36 ENSGT00900000140957.A.b #37 ENSGT00940000153130.a.b.a.b ##36 Arabian camel MODERN SPECIES 32 AJUBA (ENSCDRG00005008424) #7 HAUS4 (ENSCDRG00005008205) #8 PRMT5 (ENSCDRG00005007871) #9 ENSCDRG00005007748 #10 REM2 (ENSCDRG00005007658) #11 LRP10 (ENSCDRG00005007477) #12 MRPL52 (ENSCDRG00005007435) #13 MMP14 (ENSCDRG00005007391) #14 ENSCDRG00005007346 #15 SLC7A7 (ENSCDRG00005007288) #16 OXA1L (ENSCDRG00005007183) #17 ENSCDRG00005007166 #18 ENSCDRG00005007140 #19 ENSCDRG00005007127 #20 ABHD4 (ENSCDRG00005007100) #21 DAD1 (ENSCDRG00005007062) #22 ENSCDRG00005007041 #23 ENSCDRG00005007031 #24 ENSCDRG00005007017 #25 ENSCDRG00005007000 #26 ENSCDRG00005006988 #27 TRDV3 (ENSCDRG00005006953) #28 TRDV2 (ENSCDRG00005006905) #29 ENSCDRG00005006880 #30 ENSCDRG00005006834 #31 ENSCDRG00005006699 #32 TRAV36DV7 (ENSCDRG00005006652) #33 ENSCDRG00005006609 #34 TRAV26-2 (ENSCDRG00005006574) #35 TRAV29DV5 (ENSCDRG00005006547) #36 ENSCDRG00005006536 #37 Alpaca MODERN SPECIES 308 SLC7A7 (ENSVPAG00000005339) #16 OXA1L (ENSVPAG00000005338) #17 ABHD4 (ENSVPAG00000005336) #21 DAD1 (ENSVPAG00000005335) #22 Artiodactyla_b ANCESTRAL SPECIES 2 ENSGT00940000157841 ENSGT00390000012708 ENSGT00940000160978 #7 ENSGT00390000014634 #8 ENSGT00390000001141 #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B #18 ENSGT00910000148211 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00940000170768 ENSGT01080000258109 ENSGT00730000111639 #28 ENSGT00550000075201 #32 ENSGT00940000165951 #29 ENSGT00940000164778 ENSGT00900000140957.B #30 ENSGT00940000163224.a #31 ENSGT00940000160147.a ENSGT00940000166072 ENSGT00940000160183.d.a #33 ENSGT00940000162524.A #35 ENSGT00940000153130.a.a.a.c.b #36 ENSGT00940000153130.a.b.a.b ##36 Cetacea ANCESTRAL SPECIES 2 ENSGT00940000157841 ENSGT00390000012708 ENSGT00940000160978 #7 ENSGT00390000014634 #8 ENSGT00390000001141 #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B #18 ENSGT00910000148211 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00940000170768 ENSGT00730000111639 #28 ENSGT00900000140957.B #30 ENSGT00940000163224.a #31 ENSGT00940000160147.a ENSGT00940000166072 ENSGT00940000153130.a.b.a.a.b ##36 ENSGT00940000153073.b.b.b.b.z.a ENSGT00940000160183.c ##33 ENSGT00940000153073.a ENSGT00940000163398 ENSGT00940000153073.b.a ENSGT00940000153073.b.b.b.b.`b ENSGT00940000153130.a.a.b ##36 Odontoceti ANCESTRAL SPECIES 2 ENSGT00940000157841 ENSGT00390000012708 ENSGT00940000160978 #7 ENSGT00390000014634 #8 ENSGT00390000001141 #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B #18 ENSGT00910000148211 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00940000170768 ENSGT00730000111639 #28 ENSGT00900000140957.B #30 ENSGT00940000163224.a #31 ENSGT00940000160147.a ENSGT00940000166072.a ENSGT00940000166072.b ENSGT00940000153130.a.b.a.a.b ##36 ENSGT00940000153073.b.b.b.b.z.a ENSGT00940000160183.c ##33 ENSGT00940000153073.a ENSGT00940000163398 ENSGT00940000153073.b.a ENSGT00940000154455.b.f Sperm whale MODERN SPECIES 2 SLC22A17 (ENSPCTG00005014829) EFS (ENSPCTG00005014279) IL25 (ENSPCTG00005014086) CMTM5 (ENSPCTG00005013494) MYH6 (ENSPCTG00005012858) C11H14orf93 (ENSPCTG00005012309) ENSPCTG00005012017 #7 ENSPCTG00005011944 #7 ENSPCTG00005011928 HAUS4 (ENSPCTG00005011698) #8 PRMT5 (ENSPCTG00005010346) #9 RBM23 (ENSPCTG00005009497) #10 REM2 (ENSPCTG00005009127) #11 LRP10 (ENSPCTG00005008733) #12 ABHD4 (ENSPCTG00005008569) #21 DAD1 (ENSPCTG00005008536) #22 ENSPCTG00005008496 ENSPCTG00005008402 ENSPCTG00005008314 ENSPCTG00005008242 #28 ENSPCTG00005008075 #23 ENSPCTG00005008021 #30 ENSPCTG00005007941 ENSPCTG00005007885 ENSPCTG00005007799 ##36 ENSPCTG00005007710 TRAV20 (ENSPCTG00005007665) ##33 TRAV17 (ENSPCTG00005007652) ENSPCTG00005007618 ENSPCTG00005007590 ##36 ENSPCTG00005007577 ##36 Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00940000157841 ENSGT00390000012708 ENSGT00940000160978 #7 ENSGT00390000014634 #8 ENSGT00390000001141.i #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B #18 ENSGT00910000148211 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00900000140957.B #30 ENSGT00940000163224.a #31 ENSGT00940000160147.a ENSGT00940000166072.a ENSGT00940000153073.b.b.b.b.z.a ENSGT00940000153073.a ENSGT00940000163398 ENSGT00940000153073.b.a ENSGT00940000154455.b.f ENSGT00940000163052 ENSGT00940000159469.a.b ENSGT00740000116858 ENSGT00940000163275 ENSGT00940000162245 Dolphin MODERN SPECIES 4841 ABHD4 (ENSTTRG00000014523) #21 DAD1 (ENSTTRG00000014522) #22 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00940000157841 ENSGT00390000012708 ENSGT00940000160978 #7 ENSGT00390000014634 #8 ENSGT00390000001141.i #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B #18 ENSGT00910000148211 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT00900000140957.B #30 ENSGT00940000163224.a #31 ENSGT00940000160147.a ENSGT00940000166072.a ENSGT00940000153073.b.b.b.b.z.a ENSGT00940000153073.a ENSGT00940000163398 ENSGT00940000153073.b.a.j ENSGT00940000154455.b.f ENSGT00940000163052 ENSGT00940000159469.a.b ENSGT00740000116858 ENSGT00940000163275 ENSGT00940000162245 Monodontidae ANCESTRAL SPECIES 15 ENSGT00940000157841 ENSGT00390000012708 ENSGT00940000160978 #7 ENSGT00390000014634 #8 ENSGT00390000001141.i #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B #18 ENSGT00910000148211 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000164554 #23 ENSGT01060000251758 ENSGT00900000140957.B #30 ENSGT00940000163224.a #31 ENSGT00940000160147.a ENSGT00940000166072.a ENSGT00940000153073.b.b.b.b.z.a ENSGT00940000153073.a ENSGT00940000163052 ENSGT00940000159469.a.b ENSGT00740000116858 ENSGT00940000163275 ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888 Beluga whale MODERN SPECIES 44 PSMB11 (ENSDLEG00000019969) PSMB5 (ENSDLEG00000019970) CUNH14orf93 (ENSDLEG00000019974) AJUBA (ENSDLEG00000019978) #7 HAUS4 (ENSDLEG00000019987) #8 PRMT5 (ENSDLEG00000019993) #9 RBM23 (ENSDLEG00000020009) #10 REM2 (ENSDLEG00000020022) #11 LRP10 (ENSDLEG00000020034) #12 MMP14 (ENSDLEG00000020044) #14 SLC7A7 (ENSDLEG00000020052) #16 ENSDLEG00000020066 OXA1L (ENSDLEG00000020068) #17 ENSDLEG00000020073 #18 ABHD4 (ENSDLEG00000010554) #21 DAD1 (ENSDLEG00000010565) #22 ENSDLEG00000010569 #23 ENSDLEG00000010574 ENSDLEG00000010579 ENSDLEG00000010581 TRDV2 (ENSDLEG00000010592) #29 ENSDLEG00000010605 TRAV41 (ENSDLEG00000010617) #30 TRAV39 (ENSDLEG00000010632) #31 ENSDLEG00000010662 ENSDLEG00000010668 Narwhal MODERN SPECIES 308 PSMB5 (ENSMMNG00015011131) C14orf93 (ENSMMNG00015011104) AJUBA (ENSMMNG00015011080) #7 HAUS4 (ENSMMNG00015011037) #8 ENSMMNG00015010912 #9 RBM23 (ENSMMNG00015010808) #10 REM2 (ENSMMNG00015010749) #11 LRP10 (ENSMMNG00015010719) #12 MMP14 (ENSMMNG00015010687) #14 MRPL52 (ENSMMNG00015010642) #13 SLC7A7 (ENSMMNG00015010613) #16 OXA1L (ENSMMNG00015010592) #17 ENSMMNG00015010566 #18 ENSMMNG00015010554 ABHD4 (ENSMMNG00015010536) #21 DAD1 (ENSMMNG00015010510) #22 ENSMMNG00015010503 ENSMMNG00015010496 #26 ENSMMNG00015010494 ENSMMNG00015010481 #23 ENSMMNG00015010465 ENSMMNG00015010449 #30 ENSMMNG00015010435 TRDV2 (ENSMMNG00015010423) #29 ENSMMNG00015010411 ENSMMNG00015010405 ENSMMNG00015010393 TRAV14DV4 (ENSMMNG00015010385) ENSMMNG00015010376 TRAV2 (ENSMMNG00015010367) OR4E2 (ENSMMNG00015010254) Vaquita MODERN SPECIES 11 CDH24 (ENSPSNG00000019630) PSMB11 (ENSPSNG00000019602) PSMB5 (ENSPSNG00000019535) C14orf93 (ENSPSNG00000019391) AJUBA (ENSPSNG00000019351) #7 HAUS4 (ENSPSNG00000019326) #8 PRMT5 (ENSPSNG00000018887) #9 RBM23 (ENSPSNG00000018691) #10 REM2 (ENSPSNG00000018592) #11 LRP10 (ENSPSNG00000018527) #12 MMP14 (ENSPSNG00000018471) #14 MRPL52 (ENSPSNG00000018228) #13 SLC7A7 (ENSPSNG00000018124) #16 OXA1L (ENSPSNG00000018044) #17 ABHD4 (ENSPSNG00000017542) #21 DAD1 (ENSPSNG00000017483) #22 ENSPSNG00000017223 ENSPSNG00000017099 ENSPSNG00000017063 ENSPSNG00000017047 ENSPSNG00000016997 ENSPSNG00000016967 ENSPSNG00000016934 ENSPSNG00000016908 OR4E2 (ENSPSNG00000016023) SALL2 (ENSPSNG00000015828) METTL3 (ENSPSNG00000015776) TOX4 (ENSPSNG00000015667) RAB2B (ENSPSNG00000015559) CHD8 (ENSPSNG00000015430) SUPT16H (ENSPSNG00000015312) Blue whale MODERN SPECIES 11 PSMB11 (ENSBMSG00010010746) PSMB5 (ENSBMSG00010010731) C14orf93 (ENSBMSG00010010696) AJUBA (ENSBMSG00010010676) #7 HAUS4 (ENSBMSG00010010635) #8 PRMT5 (ENSBMSG00010010436) #9 RBM23 (ENSBMSG00010010357) #10 REM2 (ENSBMSG00010010327) #11 LRP10 (ENSBMSG00010010297) #12 MMP14 (ENSBMSG00010010266) #14 MRPL52 (ENSBMSG00010010235) #13 SLC7A7 (ENSBMSG00010010209) #16 OXA1L (ENSBMSG00010010184) #17 ENSBMSG00010010087 ABHD4 (ENSBMSG00010010078) #21 DAD1 (ENSBMSG00010010053) #22 ENSBMSG00010010041 #28 ENSBMSG00010009999 #32 TRAV41 (ENSBMSG00010009961) #30 ENSBMSG00010009948 ENSBMSG00010009934 #33 ENSBMSG00010009925 TRAV20 (ENSBMSG00010009912) ##33 ENSBMSG00010009903 TRAV17 (ENSBMSG00010009898) ENSBMSG00010009887 ENSBMSG00010009878 ##36 ENSBMSG00010009869 ##36 ENSBMSG00010009852 ##36 TRAV10 (ENSBMSG00010009843) ENSBMSG00010009837 Pecora ANCESTRAL SPECIES 6 ENSGT00940000162200 ENSGT00940000157841 ENSGT00390000012708 ENSGT00940000160978 #7 ENSGT00390000014634 #8 ENSGT00390000001141 #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B.m #18 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000163708.d ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888 ENSGT00940000153886.a.a.k.b.a ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A ENSGT00940000153402.d.b ENSGT01100000263494.a.b.b.a ENSGT00400000023212 ENSGT00940000161408 ENSGT00940000161599 ENSGT00940000164606 ENSGT00940000163695 Percora_a ANCESTRAL SPECIES 8 ENSGT00940000162200 ENSGT00940000157841 ENSGT00390000012708 ENSGT00940000160978 #7 ENSGT00390000014634 #8 ENSGT00390000001141 #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B.m #18 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000163708.d ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888 ENSGT00940000153886.a.a.k.b.a ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A ENSGT00940000153402.d.b ENSGT01100000263494.a.b.b.a ENSGT00400000023212 ENSGT00940000161408 ENSGT00940000161599 ENSGT00940000164606 ENSGT00940000163695 Siberian musk deer MODERN SPECIES 71 RBM23 (ENSMMSG00000003104) #10 REM2 (ENSMMSG00000003202) #11 LRP10 (ENSMMSG00000003220) #12 MMP14 (ENSMMSG00000003242) #14 MRPL52 (ENSMMSG00000003274) #13 SLC7A7 (ENSMMSG00000003307) #16 OXA1L (ENSMMSG00000003331) #17 ENSMMSG00000003356 #18 ENSMMSG00000003366 #18 ENSMMSG00000003376 #18 ENSMMSG00000003399 #18 ENSMMSG00000003410 ENSMMSG00000003418 ENSMMSG00000003428 ABHD4 (ENSMMSG00000003438) #21 DAD1 (ENSMMSG00000003453) #22 ENSMMSG00000003477 TRDV3 (ENSMMSG00000003515) #28 ENSMMSG00000003520 #32 TRDV2 (ENSMMSG00000003533) #29 ENSMMSG00000003541 ENSMMSG00000003561 ENSMMSG00000003570 #36 ENSMMSG00000003577 #37 ENSMMSG00000003582 #36 ENSMMSG00000003592 #36 ENSMMSG00000003604 ##36 ENSMMSG00000003616 ##30 ENSMMSG00000003629 ENSMMSG00000003639 ENSMMSG00000003645 Bovidae ANCESTRAL SPECIES 7 ENSGT00390000012708 ENSGT00940000160978 #7 ENSGT00390000014634 #8 ENSGT00390000001141 #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B.m.b #18 ENSGT01090000260011.B.m.a #18 ENSGT01090000260011.B.n #18 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000163708.d ENSGT01080000258109 ENSGT00730000111639 #28 ENSGT00550000075201 #32 ENSGT00940000165951 #29 ENSGT00940000164778 ENSGT00940000166072 ENSGT00940000160183.d.a #33 ENSGT00940000162524.A #35 ENSGT00940000153130.a.a.a.c.b.c #36 ENSGT00940000153130.a.b.a.b ##36 ENSGT00940000162998.a ENSGT00900000140957.A.a.b.s.a.b.c.a ##30 ENSGT00940000161790.c.a.a.b ENSGT00900000140957.A.a.b.s.a.a.a ##30 Bovinae ANCESTRAL SPECIES 33 ENSGT00940000160978 #7 ENSGT00390000014634 #8 ENSGT00390000001141 #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B.m.b.b #18 ENSGT01090000260011.B.m.a #18 ENSGT01090000260011.B.n #18 ENSGT00390000006178.s.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000163708.d ENSGT00980000201440 ENSGT01060000251169 ENSGT01080000258412 ENSGT00730000111639 #28 ENSGT00550000075201 #32 ENSGT00940000165951 #29 ENSGT00940000164778 ENSGT00940000153130.a.b.b.b ##36 ENSGT00940000166072.c.a Bos ANCESTRAL SPECIES 31 ENSGT00390000001141 #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B.m.b.b #18 ENSGT01090000260011.B.m.a.a.b #18 ENSGT01090000260011.B.m.b.a #18 ENSGT01090000260011.B.m.a.a.a #18 ENSGT01090000260011.B.n #18 ENSGT00390000006178.s.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000163708.d ENSGT00980000201440 ENSGT01060000251169 ENSGT00940000153130.a.b.b.b ##36 ENSGT00940000166072.c.a ENSGT00940000153130.a.a.a.c.b.d #36 ENSGT00900000140957.A.b.d #37 ENSGT00940000153130.a.a.a.c.b.c.c.b #36 ENSGT00900000140957.A.b.c #37 ENSGT00940000153130.a.a.a.c.b.c.d #36 ENSGT00940000153130.a.b.a.b ##36 ENSGT00940000162998.a.f ENSGT00940000161790.d.b ENSGT00940000153073.b.b.b.a.a.d ENSGT00940000161790.c.a.a.b.a.a Bos_a ANCESTRAL SPECIES 40 ENSGT00940000160978 #7 ENSGT00390000014634 #8 ENSGT00390000001141 #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B.n #18 ENSGT01090000260011.B.m.a.a.b #18 ENSGT00390000006178.s.b ENSGT00950000183087.A.a.a.a.b.a ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00980000201440 ENSGT01060000251169 Domestic yak MODERN SPECIES 2 HAUS4 (ENSBGRG00000005108) #8 PRMT5 (ENSBGRG00000004439) #9 RBM23 (ENSBGRG00000004216) #10 REM2 (ENSBGRG00000004119) #11 LRP10 (ENSBGRG00000004081) #12 MMP14 (ENSBGRG00000004010) #14 MRPL52 (ENSBGRG00000003895) #13 SLC7A7 (ENSBGRG00000003777) #16 OXA1L (ENSBGRG00000003716) #17 ENSBGRG00000003690 #18 ENSBGRG00000003678 #18 ENSBGRG00000003650 ENSBGRG00000003626 ENSBGRG00000008380 ABHD4 (ENSBGRG00000008271) #21 DAD1 (ENSBGRG00000008204) #22 ENSBGRG00000008175 ENSBGRG00000008164 ENSBGRG00000008157 ENSBGRG00000008146 ENSBGRG00000008096 TRDC (ENSBGRG00000008065) #32 ENSBGRG00000008054 TRDV2 (ENSBGRG00000008028) #29 ENSBGRG00000008013 ENSBGRG00000008000 ENSBGRG00000007987 ENSBGRG00000007977 ##36 ENSBGRG00000007946 #36 ENSBGRG00000007933 #37 ENSBGRG00000007915 #36 Wild yak MODERN SPECIES 723 C14orf93 (ENSBMUG00000018246) AJUBA (ENSBMUG00000018267) #7 HAUS4 (ENSBMUG00000018324) #8 PRMT5 (ENSBMUG00000018509) #9 RBM23 (ENSBMUG00000018668) #10 REM2 (ENSBMUG00000018707) #11 LRP10 (ENSBMUG00000018763) #12 MMP14 (ENSBMUG00000018824) #14 MRPL52 (ENSBMUG00000018880) #13 SLC7A7 (ENSBMUG00000018917) #16 OXA1L (ENSBMUG00000018974) #17 ENSBMUG00000018990 #18 ENSBMUG00000019005 ENSBMUG00000019015 ABHD4 (ENSBMUG00000019028) #21 DAD1 (ENSBMUG00000019046) #22 ENSBMUG00000019081 ENSBMUG00000019107 ENSBMUG00000019123 ENSBMUG00000019142 ENSBMUG00000019162 ENSBMUG00000019180 #32 ENSBMUG00000019192 Bos_b ANCESTRAL SPECIES 28 ENSGT00390000001141 #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B.m.b.b #18 ENSGT01090000260011.B.m.a.a.b #18 ENSGT01090000260011.B.m.b.a #18 ENSGT01090000260011.B.m.a.a.a #18 ENSGT01090000260011.B.n #18 ENSGT00390000006178.s.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000163708.d ENSGT00980000201440 ENSGT01080000258412 ENSGT00730000111639 #28 ENSGT00550000075201 #32 ENSGT00940000165951 #29 ENSGT00940000164778 ENSGT00940000165763.d.a ENSGT00940000166072.c.a.a ENSGT00940000166072.c.a.b ENSGT00940000153130.a.a.a.c.b.d #36 ENSGT00900000140957.A.b.d #37 ENSGT00940000153130.a.a.a.c.b.c.c.b #36 ENSGT00900000140957.A.b.c #37 ENSGT00940000153130.a.a.a.c.b.c.d #36 Hybrid Bos Indicus MODERN SPECIES 1 MMP14 (ENSBIXG00005024467) #14 MRPL52 (ENSBIXG00005024443) #13 SLC7A7 (ENSBIXG00005024321) #16 ENSBIXG00005006520 OXA1L (ENSBIXG00005024237) #17 ENSBIXG00005024155 #18 ENSBIXG00005004126 #18 ENSBIXG00005007079 #18 ENSBIXG00005024084 #18 ENSBIXG00005024078 #18 ENSBIXG00005024069 ENSBIXG00005024043 ENSBIXG00005024036 ENSBIXG00005024022 ABHD4 (ENSBIXG00005004108) #21 DAD1 (ENSBIXG00005006908) #22 ENSBIXG00005023919 ENSBIXG00005007390 ENSBIXG00005006841 ENSBIXG00005023891 ENSBIXG00005023885 ENSBIXG00005023877 ENSBIXG00005023869 ENSBIXG00005005559 ENSBIXG00005023853 ENSBIXG00005023845 ENSBIXG00005004084 ENSBIXG00005023831 ENSBIXG00005023825 ENSBIXG00005004081 ENSBIXG00005023810 Cow MODERN SPECIES 1 PRMT5 (ENSBTAG00000010890) #9 RBM23 (ENSBTAG00000038333) #10 REM2 (ENSBTAG00000016381) #11 LRP10 (ENSBTAG00000016378) #12 MMP14 (ENSBTAG00000014824) #14 MRPL52 (ENSBTAG00000014822) #13 SLC7A7 (ENSBTAG00000014821) #16 OXA1L (ENSBTAG00000014820) #17 OR6E1D (ENSBTAG00000052080) #18 OR6E1B (ENSBTAG00000052423) #18 OR6E1C (ENSBTAG00000054564) #18 OR6E1 (ENSBTAG00000050326) #18 OR6E1E (ENSBTAG00000051691) #18 ENSBTAG00000009274 ABHD4 (ENSBTAG00000016658) #21 DAD1 (ENSBTAG00000019077) #22 ENSBTAG00000000432 ENSBTAG00000054785 ENSBTAG00000050828 ENSBTAG00000050128 ENSBTAG00000051261 ENSBTAG00000055197 #32 ENSBTAG00000054106 ENSBTAG00000049900 ENSBTAG00000049803 ENSBTAG00000049985 ENSBTAG00000052267 ENSBTAG00000054833 ##30 ENSBTAG00000050913 ENSBTAG00000047690 ##36 ENSBTAG00000054417 American bison MODERN SPECIES 3371 RBM23 (ENSBBBG00000006214) #10 REM2 (ENSBBBG00000008315) #11 LRP10 (ENSBBBG00000000301) #12 MMP14 (ENSBBBG00000023905) #14 MRPL52 (ENSBBBG00000023959) #13 SLC7A7 (ENSBBBG00000024018) #16 OXA1L (ENSBBBG00000024118) #17 ENSBBBG00000024134 #18 ENSBBBG00000024137 #18 ENSBBBG00000008981 #18 ENSBBBG00000024153 ENSBBBG00000008646 ENSBBBG00000024170 ENSBBBG00000024178 ABHD4 (ENSBBBG00000008871) #21 DAD1 (ENSBBBG00000024198) #22 ENSBBBG00000006296 ENSBBBG00000024207 ENSBBBG00000024211 ENSBBBG00000008989 ENSBBBG00000024219 ENSBBBG00000024222 #30 ENSBBBG00000024277 ENSBBBG00000024285 ENSBBBG00000024291 #36 TRAV26-2 (ENSBBBG00000024297) #35 ENSBBBG00000006330 #36 ENSBBBG00000024310 ##36 ENSBBBG00000024315 ENSBBBG00000008826 ENSBBBG00000006336 ##36 Caprinae ANCESTRAL SPECIES 30 ENSGT00390000012708 ENSGT00940000160978 #7 ENSGT00390000014634 #8 ENSGT00390000001141 #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B.m.b #18 ENSGT01090000260011.B.m.a #18 ENSGT01090000260011.B.n #18 ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000163708.d ENSGT01080000258109 ENSGT00730000111639 #28 ENSGT00550000075201 #32 ENSGT00940000165951 #29 ENSGT00940000166072 ENSGT00940000153130.a.a.a.c.b.d #36 ENSGT00940000162524.A #35 ENSGT00940000153130.a.a.a.c.b.c #36 ENSGT00900000140957.A.a.b.t.a ##30 ENSGT00940000163717 ENSGT00940000153130.a.a.a.c.a.u ##36 ENSGT00900000140957.A.a.b.s.a.b.d ##30 ENSGT00900000140957.A.a.b.s.b.c.a ##30 ENSGT00940000153073.a.k.b.b.c.a.a Goat MODERN SPECIES 1 ENSCHIG00000024418 PSMB5 (ENSCHIG00000011511) C14orf93 (ENSCHIG00000021325) AJUBA (ENSCHIG00000025926) #7 HAUS4 (ENSCHIG00000019264) #8 PRMT5 (ENSCHIG00000016954) #9 REM2 (ENSCHIG00000012090) #11 LRP10 (ENSCHIG00000003799) #12 RBM23 (ENSCHIG00000025709) #10 MMP14 (ENSCHIG00000011010) #14 MRPL52 (ENSCHIG00000014047) #13 SLC7A7 (ENSCHIG00000022436) #16 OXA1L (ENSCHIG00000022345) #17 ENSCHIG00000013184 #18 ABHD4 (ENSCHIG00000005601) #21 DAD1 (ENSCHIG00000017326) #22 ENSCHIG00000012503 TRDC (ENSCHIG00000024517) #32 TRAV36DV7 (ENSCHIG00000015670) #33 TRAV26-2 (ENSCHIG00000014121) #35 TRAV29DV5 (ENSCHIG00000014189) #36 ENSCHIG00000012575 ##30 ENSCHIG00000006374 ENSCHIG00000013268 ##30 ENSCHIG00000017647 ENSCHIG00000014547 ##30 ENSCHIG00000012600 ##30 ENSCHIG00000007939 ENSCHIG00000013389 ##30 ENSCHIG00000017339 ##30 ENSCHIG00000025281 ##30 Rambouillet Sheep MODERN SPECIES 23 C14orf93 (ENSOARG00020017179) AJUBA (ENSOARG00020017465) #7 HAUS4 (ENSOARG00020017603) #8 PRMT5 (ENSOARG00020017830) #9 RBM23 (ENSOARG00020019058) #10 REM2 (ENSOARG00020019163) #11 LRP10 (ENSOARG00020019221) #12 MMP14 (ENSOARG00020009862) #14 MRPL52 (ENSOARG00020010106) #13 SLC7A7 (ENSOARG00020010417) #16 OXA1L (ENSOARG00020010686) #17 ENSOARG00020010800 #18 ENSOARG00020010842 #18 ENSOARG00020010895 #18 ABHD4 (ENSOARG00020011057) #21 DAD1 (ENSOARG00020011202) #22 ENSOARG00020011258 ENSOARG00020011394 ENSOARG00020011409 ENSOARG00020011425 ENSOARG00020011448 TRDV3 (ENSOARG00020011466) #28 TRDC (ENSOARG00020011494) #32 TRDV2 (ENSOARG00020011567) #29 ENSOARG00020011603 ENSOARG00020011623 #36 TRAV26-2 (ENSOARG00020011648) #35 ENSOARG00020011683 #36 ENSOARG00020011730 ENSOARG00020011757 ##36 ENSOARG00020011792 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 28 ENSCHYG00000024022 ANAPC11 (ENSCHYG00000024045) ENSCHYG00000024063 P4HB (ENSCHYG00000024081) PPP1R27 (ENSCHYG00000024219) MCRIP1 (ENSCHYG00000024250) GCGR (ENSCHYG00000024352) SLC25A10 (ENSCHYG00000024415) MRPL12 (ENSCHYG00000024470) HGS (ENSCHYG00000024504) ARL16 (ENSCHYG00000024567) CCDC137 (ENSCHYG00000024590) OXLD1 (ENSCHYG00000005913) ENSCHYG00000005931 TSPAN10 (ENSCHYG00000006021) ENSCHYG00000006202 #22 NPLOC4 (ENSCHYG00000006240) ENSCHYG00000006321 FAAP100 (ENSCHYG00000006343) FSCN2 (ENSCHYG00000006437) ACTG1 (ENSCHYG00000006481) BAHCC1 (ENSCHYG00000006566) SLC38A10 (ENSCHYG00000006821) NDUFAF8 (ENSCHYG00000006983) TEPSIN (ENSCHYG00000007009) CEP131 (ENSCHYG00000007067) PVALEF (ENSCHYG00000007265) AATK (ENSCHYG00000007314) BAIAP2 (ENSCHYG00000007498) CHMP6 (ENSCHYG00000007924) RPTOR (ENSCHYG00000008045) Yarkand deer MODERN SPECIES 3 ENSCHYG00000016436 C14orf93 (ENSCHYG00000016592) AJUBA (ENSCHYG00000016731) #7 HAUS4 (ENSCHYG00000016879) #8 PRMT5 (ENSCHYG00000017109) #9 RBM23 (ENSCHYG00000018246) #10 REM2 (ENSCHYG00000018358) #11 LRP10 (ENSCHYG00000018426) #12 MMP14 (ENSCHYG00000018620) #14 SLC7A7 (ENSCHYG00000018767) #16 ENSCHYG00000018959 #13 OXA1L (ENSCHYG00000019267) #17 ENSCHYG00000019500 ENSCHYG00000019651 ABHD4 (ENSCHYG00000019707) #21 ENSCHYG00000019819 #22 ENSCHYG00000019884 TRDV3 (ENSCHYG00000020003) #28 ENSCHYG00000009457 #32 TRDV2 (ENSCHYG00000009486) #29 ENSCHYG00000009499 OR4E1 (ENSCHYG00000009527) OR4E2 (ENSCHYG00000009552) ENSCHYG00000009578 OR10G3 (ENSCHYG00000009604) ENSCHYG00000009619 SALL2 (ENSCHYG00000009676) METTL3 (ENSCHYG00000009777) TOX4 (ENSCHYG00000009949) ENSCHYG00000010144 CHD8 (ENSCHYG00000010268) Suina ANCESTRAL SPECIES 30 ENSGT00940000157841.p ENSGT00390000012708 ENSGT00940000160978 #7 ENSGT00390000014634 #8 ENSGT00390000001141 #9 ENSGT00940000162546 #10 ENSGT00940000160062 #11 ENSGT00940000160783 #12 ENSGT00940000157808 #14 ENSGT00390000005763 #13 ENSGT00940000160134 #16 ENSGT00530000063506.B #17 ENSGT01090000260011.B #18 ENSGT01090000260086.A.c.a.b ENSGT00390000016277.b #21 ENSGT00390000003324 #22 ENSGT00940000160147.b ENSGT00730000111639 #28 ENSGT00550000075201 #32 ENSGT00940000165951 #29 ENSGT00940000166072 Chacoan peccary MODERN SPECIES 884 ENSCWAG00000020473 C14orf93 (ENSCWAG00000020482) AJUBA (ENSCWAG00000020496) #7 HAUS4 (ENSCWAG00000020523) #8 PRMT5 (ENSCWAG00000020565) #9 RBM23 (ENSCWAG00000020740) #10 REM2 (ENSCWAG00000020754) #11 LRP10 (ENSCWAG00000020768) #12 MMP14 (ENSCWAG00000020783) #14 MRPL52 (ENSCWAG00000020797) #13 SLC7A7 (ENSCWAG00000020831) #16 OXA1L (ENSCWAG00000020858) #17 ENSCWAG00000020864 #18 OR6J1 (ENSCWAG00000020867) ABHD4 (ENSCWAG00000020875) #21 DAD1 (ENSCWAG00000020889) #22 ENSCWAG00000020911 #32 TRDV3 (ENSCWAG00000020957) #28 ENSCWAG00000003910 TRAV26-1 (ENSCWAG00000003960) TRAV29DV5 (ENSCWAG00000003985) #36 ENSCWAG00000004010 ##36 ENSCWAG00000004027 ENSCWAG00000004049 ENSCWAG00000004063 ##30 ENSCWAG00000004084 ##36 ENSCWAG00000004097 ENSCWAG00000004116 ENSCWAG00000004140 ##30 ENSCWAG00000004163 ENSCWAG00000004174 ##30 Pig MODERN SPECIES 15 C14orf93 (ENSSSCG00000031452) AJUBA (ENSSSCG00000029201) #7 HAUS4 (ENSSSCG00000033178) #8 PRMT5 (ENSSSCG00000030045) #9 RBM23 (ENSSSCG00000026700) #10 REM2 (ENSSSCG00000031874) #11 LRP10 (ENSSSCG00000034465) #12 MMP14 (ENSSSCG00000002039) #14 MRPL52 (ENSSSCG00000002040) #13 SLC7A7 (ENSSSCG00000002041) #16 OXA1L (ENSSSCG00000002042) #17 ENSSSCG00000059245 #18 ENSSSCG00000056092 #18 OR6J1 (ENSSSCG00000002052) ABHD4 (ENSSSCG00000002051) #21 DAD1 (ENSSSCG00000002050) #22 ENSSSCG00000033721 ENSSSCG00000046912 ENSSSCG00000046018 ENSSSCG00000031641 ENSSSCG00000041741 ENSSSCG00000031495 #28 ENSSSCG00000056250 #32 ENSSSCG00000054641 #29 ENSSSCG00000049724 ENSSSCG00000022057 ENSSSCG00000002062 #37 ENSSSCG00000042643 ENSSSCG00000056989 ##30 ENSSSCG00000049023 ENSSSCG00000058937