Gnathostomata	ANCESTRAL SPECIES	1273																ENSGT00940000160346.B #22	ENSGT00940000158292.a #23
Euteleostomi	ANCESTRAL SPECIES	5	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000165391	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00940000167263	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245
Sarcopterygii	ANCESTRAL SPECIES	20	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000165391	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00940000162930
Tetrapoda	ANCESTRAL SPECIES	15	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000165391	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00940000167263	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245
Amniota	ANCESTRAL SPECIES	12	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Mammalia	ANCESTRAL SPECIES	22	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c	ENSGT00550000074867
Theria	ANCESTRAL SPECIES	13	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c	ENSGT00550000074867
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Boreoeutheria	ANCESTRAL SPECIES	15	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00390000016775	ENSGT00910000148371	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00950000185367	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Euarchontoglires	ANCESTRAL SPECIES	15	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00390000016775	ENSGT00910000148371	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00950000185367	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Primates	ANCESTRAL SPECIES	14	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00940000155145 #10	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Haplorrhini	ANCESTRAL SPECIES	15	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00940000155145 #10	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Simiiformes	ANCESTRAL SPECIES	14	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Catarrhini	ANCESTRAL SPECIES	17	ENSGT00390000013008	ENSGT00940000154174.s.a.a.b	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00940000155145 #10	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.i.a ##30	ENSGT00910000148255	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36
Cercopithecidae	ANCESTRAL SPECIES	18	ENSGT00390000013008	ENSGT00940000154174.s.a.a.b	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00940000155145 #10	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00910000148255	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b.q.a #37
Cercopithecinae	ANCESTRAL SPECIES	17	ENSGT00390000013008	ENSGT00940000154174.s.a.a.b	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00940000155145 #10	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00910000148255	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B.cb #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b.q.a #37
Cercopithecinae_a	ANCESTRAL SPECIES	17	ENSGT00390000013008	ENSGT00940000154174.s.a.a.b	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00940000155145 #10	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00910000148255	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B.cb #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b.q.a #37
Macaca	ANCESTRAL SPECIES	17	ENSGT00390000013008	ENSGT00940000154174.s.a.a.b	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000155145 #10	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00910000148255	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B.cb #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b.q.a #37
Macaca_a	ANCESTRAL SPECIES	15	ENSGT00390000013008	ENSGT01100000263539.b.a.a.a.b.b.b.b.a.a.b	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000155145 #10	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT01100000263508.A.d.e.b.a.c.b.c.a.b.a.a.a.b.b #21	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B.bb ##34	ENSGT00940000154141.B.cb #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b.q.a #37
Crab-eating macaque	MODERN SPECIES	4	ENSMFAG00000063384 #7	ENSMFAG00000051345 #8	THADA (ENSMFAG00000015722) #9	C1GALT1C1L (ENSMFAG00000030612) #10	PLEKHH2 (ENSMFAG00000037120) #11	ABCG5 (ENSMFAG00000003442) #12	ABCG8 (ENSMFAG00000045442) #13	LRPPRC (ENSMFAG00000041560) #14	ENSMFAG00000058293 #15	ENSMFAG00000057111 #16	PPM1B (ENSMFAG00000000709) #17	SLC3A1 (ENSMFAG00000030088) #18	PREPL (ENSMFAG00000038619) #19	CAMKMT (ENSMFAG00000003584) #20	ENSMFAG00000058478 #21	SIX3 (ENSMFAG00000059333) #22	SIX2 (ENSMFAG00000056852) #23	SRBD1 (ENSMFAG00000042026) #24	PRKCE (ENSMFAG00000003236) #25	EPAS1 (ENSMFAG00000004035) #26	TMEM247 (ENSMFAG00000002875) #27	RHOQ (ENSMFAG00000054514) #28	PIGF (ENSMFAG00000043629) #29	ENSMFAG00000037609 #30	SOCS5 (ENSMFAG00000030827) #31	ENSMFAG00000050996 #32	ENSMFAG00000051502 #33	MCFD2 (ENSMFAG00000061552) #34	TTC7A (ENSMFAG00000040123) #35	STPG4 (ENSMFAG00000028787) #36	CALM2 (ENSMFAG00000003711) #37
Rhesus	MODERN SPECIES	4	HAAO (ENSMMUG00000064735)	ENSMMUG00000051204	ZFP36L2 (ENSMMUG00000059805) #7	THADA (ENSMMUG00000000642) #9	C1GALT1C1L (ENSMMUG00000008076) #10	PLEKHH2 (ENSMMUG00000008074) #11	DYNC2LI1 (ENSMMUG00000008077)	ABCG5 (ENSMMUG00000008080) #12	ABCG8 (ENSMMUG00000008081) #13	LRPPRC (ENSMMUG00000019841) #14	PPM1B (ENSMMUG00000022261) #17	SLC3A1 (ENSMMUG00000006310) #18	PREPL (ENSMMUG00000006311) #19	CAMKMT (ENSMMUG00000006312) #20	ENSMMUG00000061283 #21	SIX3 (ENSMMUG00000014824) #22	ENSMMUG00000053683 ##32	SIX2 (ENSMMUG00000023752) #23	SRBD1 (ENSMMUG00000003490) #24	PRKCE (ENSMMUG00000014425) #25	EPAS1 (ENSMMUG00000023326) #26	TMEM247 (ENSMMUG00000023328) #27	ATP6V1E2 (ENSMMUG00000005392)	RHOQ (ENSMMUG00000005391) #28	PIGF (ENSMMUG00000005389) #29	CRIPT (ENSMMUG00000048973) #30	SOCS5 (ENSMMUG00000039303) #31	MCFD2 (ENSMMUG00000042395) ##34	TTC7A (ENSMMUG00000003310) #35	STPG4 (ENSMMUG00000058455) #36	ENSMMUG00000017466
Pig-tailed macaque	MODERN SPECIES	341	ENSMNEG00000029697	ENSMNEG00000009966	ZFP36L2 (ENSMNEG00000034994) #7	ENSMNEG00000032148	THADA (ENSMNEG00000024145) #9	PLEKHH2 (ENSMNEG00000038378) #11	C1GALT1C1L (ENSMNEG00000011982) #10	DYNC2LI1 (ENSMNEG00000042290)	ABCG5 (ENSMNEG00000035419) #12	ABCG8 (ENSMNEG00000027676) #13	ENSMNEG00000031613	PPM1B (ENSMNEG00000031952) #17	SLC3A1 (ENSMNEG00000035470) #18	PREPL (ENSMNEG00000043494) #19	CAMKMT (ENSMNEG00000039960) #20	SIX3 (ENSMNEG00000043772) #22	SIX2 (ENSMNEG00000026299) #23	SRBD1 (ENSMNEG00000034701) #24	PRKCE (ENSMNEG00000032412) #25	EPAS1 (ENSMNEG00000009552) #26	TMEM247 (ENSMNEG00000039915) #27	ATP6V1E2 (ENSMNEG00000024749)	RHOQ (ENSMNEG00000039078) #28	PIGF (ENSMNEG00000038833) #29	ENSMNEG00000011697	CRIPT (ENSMNEG00000032455) #30	SOCS5 (ENSMNEG00000011264) #31	MCFD2 (ENSMNEG00000032272) #34	TTC7A (ENSMNEG00000020883) #35	STPG4 (ENSMNEG00000045124) #36	ENSMNEG00000027057
Cercopithecinae_b	ANCESTRAL SPECIES	15	ENSGT00390000013008	ENSGT00940000154174.s.a.a.b	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00940000155145 #10	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B.cb #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b.q.a #37	ENSGT00390000018245.c
Olive baboon	MODERN SPECIES	5	ENSPANG00000035015	ENSPANG00000045468	ZFP36L2 (ENSPANG00000018603) #7	THADA (ENSPANG00000017546) #9	PLEKHH2 (ENSPANG00000019544) #11	C1GALT1C1L (ENSPANG00000033784) #10	DYNC2LI1 (ENSPANG00000010875)	ABCG5 (ENSPANG00000020733) #12	ABCG8 (ENSPANG00000018837) #13	LRPPRC (ENSPANG00000020731) #14	ENSPANG00000041715	PPM1B (ENSPANG00000013266) #17	SLC3A1 (ENSPANG00000009101) #18	PREPL (ENSPANG00000023718) #19	CAMKMT (ENSPANG00000015286) #20	SIX3 (ENSPANG00000006893) #22	ENSPANG00000048211 ##32	SIX2 (ENSPANG00000022339) #23	SRBD1 (ENSPANG00000008063) #24	PRKCE (ENSPANG00000050999) #25	EPAS1 (ENSPANG00000013264) #26	ENSPANG00000040402	TMEM247 (ENSPANG00000024445) #27	ATP6V1E2 (ENSPANG00000005031)	RHOQ (ENSPANG00000022553) #28	PIGF (ENSPANG00000007921) #29	CRIPT (ENSPANG00000035883) #30	ENSPANG00000014669 #31	MCFD2 (ENSPANG00000023116) #34	TTC7A (ENSPANG00000022915) #35	STPG4 (ENSPANG00000009442) #36
Cercopithecinae_d	ANCESTRAL SPECIES	79	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT01090000260213	ENSGT00910000146766	ENSGT00940000155145 #10	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B.cb #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b.q.a #37	ENSGT00390000018245.c
Sooty mangabey	MODERN SPECIES	161									ENSCATG00000022490 #13	ENSCATG00000014187	ENSCATG00000031023	PPM1B (ENSCATG00000032751) #17	SLC3A1 (ENSCATG00000042521) #18	PREPL (ENSCATG00000009706) #19	CAMKMT (ENSCATG00000037117) #20	SIX3 (ENSCATG00000034034) #22	SIX2 (ENSCATG00000009970) #23	SRBD1 (ENSCATG00000039530) #24	PRKCE (ENSCATG00000040854) #25	EPAS1 (ENSCATG00000041291) #26	TMEM247 (ENSCATG00000038678) #27	ATP6V1E2 (ENSCATG00000014793)	RHOQ (ENSCATG00000034599) #28	PIGF (ENSCATG00000016440) #29	CRIPT (ENSCATG00000030782) #30	SOCS5 (ENSCATG00000018703) #31	MCFD2 (ENSCATG00000026050) #34	TTC7A (ENSCATG00000040563) #35	STPG4 (ENSCATG00000032856) #36	CALM2 (ENSCATG00000033791) #37	EPCAM (ENSCATG00000015834)
Drill	MODERN SPECIES	712	HAAO (ENSMLEG00000037812)	ENSMLEG00000028246	ENSMLEG00000031721	THADA (ENSMLEG00000028846) #9	PLEKHH2 (ENSMLEG00000001696) #11	C1GALT1C1L (ENSMLEG00000021515) #10	ENSMLEG00000037553	DYNC2LI1 (ENSMLEG00000042475)	ABCG5 (ENSMLEG00000041429) #12	ABCG8 (ENSMLEG00000028413) #13	LRPPRC (ENSMLEG00000043673) #14	PPM1B (ENSMLEG00000028802) #17	SLC3A1 (ENSMLEG00000034220) #18	PREPL (ENSMLEG00000043979) #19	CAMKMT (ENSMLEG00000028955) #20	SIX3 (ENSMLEG00000037068) #22	SIX2 (ENSMLEG00000044285) #23
Vervet Monkey	MODERN SPECIES	5	KCNG3 (ENSCSAG00000012626)	MTA3 (ENSCSAG00000012640)	OXER1 (ENSCSAG00000019454)	HAAO (ENSCSAG00000012689)	ZFP36L2 (ENSCSAG00000012709) #7	THADA (ENSCSAG00000012732) #9	PLEKHH2 (ENSCSAG00000012860) #11	DYNC2LI1 (ENSCSAG00000012917)	ABCG5 (ENSCSAG00000012947) #12	ABCG8 (ENSCSAG00000012997) #13	ENSCSAG00000013233	PPM1B (ENSCSAG00000013302) #17	SLC3A1 (ENSCSAG00000013309) #18	PREPL (ENSCSAG00000013317) #19	CAMKMT (ENSCSAG00000013325) #20	SIX3 (ENSCSAG00000013334) #22	SIX2 (ENSCSAG00000013339) #23	SRBD1 (ENSCSAG00000013350) #24	PRKCE (ENSCSAG00000013435) #25	EPAS1 (ENSCSAG00000013481) #26	TMEM247 (ENSCSAG00000013492) #27	ATP6V1E2 (ENSCSAG00000019453)	RHOQ (ENSCSAG00000013504) #28	PIGF (ENSCSAG00000013510) #29	SOCS5 (ENSCSAG00000019452) #31	ENSCSAG00000013517	MCFD2 (ENSCSAG00000013524) #34	TTC7A (ENSCSAG00000013538) #35	STPG4 (ENSCSAG00000013545) #36	CALM2 (ENSCSAG00000013552) #37	EPCAM (ENSCSAG00000013561)
Rhinopithecus	ANCESTRAL SPECIES	170	ENSGT00390000013008	ENSGT00940000154174.s.a.a.b	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682.f #14	ENSGT00960000186682.e #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b
Golden snub-nosed monkey	MODERN SPECIES	3091										ENSRROG00000039512	ENSRROG00000042793 #14	PPM1B (ENSRROG00000045182) #17	SLC3A1 (ENSRROG00000028579) #18	PREPL (ENSRROG00000041940) #19	CAMKMT (ENSRROG00000030830) #20	SIX3 (ENSRROG00000042657) #22	SIX2 (ENSRROG00000043241) #23
Black snub-nosed monkey	MODERN SPECIES	2342	ZFP36L2 (ENSRBIG00000026428) #7	ENSRBIG00000035265	THADA (ENSRBIG00000028134) #9	PLEKHH2 (ENSRBIG00000035745) #11	C1GALT1C1L (ENSRBIG00000006561) #10	ENSRBIG00000041164	DYNC2LI1 (ENSRBIG00000031972)	ABCG5 (ENSRBIG00000039579) #12	ABCG8 (ENSRBIG00000024223) #13	LRPPRC (ENSRBIG00000031552) #14	ENSRBIG00000036556	PPM1B (ENSRBIG00000037090) #17	SLC3A1 (ENSRBIG00000032035) #18	PREPL (ENSRBIG00000030291) #19	CAMKMT (ENSRBIG00000031044) #20	SIX3 (ENSRBIG00000031093) #22	SIX2 (ENSRBIG00000041429) #23	SRBD1 (ENSRBIG00000033486) #24	PRKCE (ENSRBIG00000043807) #25	EPAS1 (ENSRBIG00000032880) #26	TMEM247 (ENSRBIG00000044940) #27	ATP6V1E2 (ENSRBIG00000004827)	RHOQ (ENSRBIG00000026914) #28	PIGF (ENSRBIG00000037873) #29	ENSRBIG00000012594	ENSRBIG00000032105 #30	SOCS5 (ENSRBIG00000030271) #31	MCFD2 (ENSRBIG00000043450) #34
Hominoidea	ANCESTRAL SPECIES	18	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000154174.s.a.a.b	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617.e #29	ENSGT00950000183100.C.i.a ##30	ENSGT00910000148255	ENSGT00950000183100.C.j #30	ENSGT00940000159000.e #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36
Hominidae	ANCESTRAL SPECIES	19	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000154174.s.a.a.b	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617.e #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000.e #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b.r ##37	ENSGT00390000018245.c
Orangutan	MODERN SPECIES	14	MTA3 (ENSPPYG00000012461)	OXER1 (ENSPPYG00000012460)	HAAO (ENSPPYG00000012459)	ZFP36L2 (ENSPPYG00000030549) #7	THADA (ENSPPYG00000012456) #9	C1GALT1C1L (ENSPPYG00000012704) #10	PLEKHH2 (ENSPPYG00000012455) #11	DYNC2LI1 (ENSPPYG00000012454)	ABCG5 (ENSPPYG00000012453) #12	ABCG8 (ENSPPYG00000012452) #13	LRPPRC (ENSPPYG00000029532) #14	PPM1B (ENSPPYG00000012451) #17	SLC3A1 (ENSPPYG00000012450) #18	PREPL (ENSPPYG00000012449) #19	CAMKMT (ENSPPYG00000012448) #20	SIX3 (ENSPPYG00000041063) #22	SIX2 (ENSPPYG00000012446) #23	SRBD1 (ENSPPYG00000012444) #24	PRKCE (ENSPPYG00000012443) #25	EPAS1 (ENSPPYG00000012442) #26	TMEM247 (ENSPPYG00000012441) #27	ATP6V1E2 (ENSPPYG00000012440)	RHOQ (ENSPPYG00000012439) #28	PIGF (ENSPPYG00000035818) #29	CRIPT (ENSPPYG00000030961) #30	SOCS5 (ENSPPYG00000038069) #31	MCFD2 (ENSPPYG00000036629) #34	TTC7A (ENSPPYG00000012432) #35	STPG4 (ENSPPYG00000012431) #36	CALM2 (ENSPPYG00000012430) ##37	EPCAM (ENSPPYG00000012429)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	18	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000154174.s.a.a.b	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617.e #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000.e #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b.r ##37	ENSGT00390000018245.c
Gorilla	MODERN SPECIES	14	MTA3 (ENSGGOG00000006895)	ENSGGOG00000040480	ENSGGOG00000038833	ZFP36L2 (ENSGGOG00000001402) #7	ENSGGOG00000009564	THADA (ENSGGOG00000007860) #9	PLEKHH2 (ENSGGOG00000012607) #11	DYNC2LI1 (ENSGGOG00000023339)	ABCG5 (ENSGGOG00000000620) #12	ABCG8 (ENSGGOG00000000622) #13	ENSGGOG00000000626	PPM1B (ENSGGOG00000014395) #17	SLC3A1 (ENSGGOG00000011896) #18	PREPL (ENSGGOG00000007235) #19	CAMKMT (ENSGGOG00000044220) #20	ENSGGOG00000037046 #22	SIX2 (ENSGGOG00000008605) #23	SRBD1 (ENSGGOG00000005910) #24	PRKCE (ENSGGOG00000011965) #25	TMEM247 (ENSGGOG00000007139) #27	ATP6V1E2 (ENSGGOG00000011550)	RHOQ (ENSGGOG00000023494) #28	PIGF (ENSGGOG00000024478) #29	CRIPT (ENSGGOG00000015059) #30	SOCS5 (ENSGGOG00000008234) #31	MCFD2 (ENSGGOG00000012267) #34	TTC7A (ENSGGOG00000009310) #35	STPG4 (ENSGGOG00000002525) #36	CALM1 (ENSGGOG00000002521) ##37	EPCAM (ENSGGOG00000022888)	MSH2 (ENSGGOG00000007088)
Homo/Pan group	ANCESTRAL SPECIES	14	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000154174.s.a.a.b	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617.e #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000.e #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b.r ##37	ENSGT00390000018245.c
Human	MODERN SPECIES	11	MTA3 (ENSG00000057935)	OXER1 (ENSG00000162881)	HAAO (ENSG00000162882)	ZFP36L2 (ENSG00000152518) #7	THADA (ENSG00000115970) #9	PLEKHH2 (ENSG00000152527) #11	C1GALT1C1L (ENSG00000223658) #10	DYNC2LI1 (ENSG00000138036)	ABCG5 (ENSG00000138075) #12	ABCG8 (ENSG00000143921) #13	LRPPRC (ENSG00000138095) #14	PPM1B (ENSG00000138032) #17	SLC3A1 (ENSG00000138079) #18	PREPL (ENSG00000138078) #19	CAMKMT (ENSG00000143919) #20	SIX3 (ENSG00000138083) #22	SIX2 (ENSG00000170577) #23	SRBD1 (ENSG00000068784) #24	PRKCE (ENSG00000171132) #25	EPAS1 (ENSG00000116016) #26	TMEM247 (ENSG00000284701) #27	ATP6V1E2 (ENSG00000250565)	RHOQ (ENSG00000119729) #28	PIGF (ENSG00000151665) #29	CRIPT (ENSG00000119878) #30	SOCS5 (ENSG00000171150) #31	MCFD2 (ENSG00000180398) #34	TTC7A (ENSG00000068724) #35	STPG4 (ENSG00000239605) #36	CALM2 (ENSG00000143933) #37	EPCAM (ENSG00000119888)
Pan	ANCESTRAL SPECIES	17	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000154174.s.a.a.b	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617.e #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000.e #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b.r ##37	ENSGT00390000018245.c
Bonobo	MODERN SPECIES	14	OXER1 (ENSPPAG00000015821)	HAAO (ENSPPAG00000000403)	ENSPPAG00000024936	ENSPPAG00000031644 #7	ENSPPAG00000035930	THADA (ENSPPAG00000010912) #9	PLEKHH2 (ENSPPAG00000031287) #11	DYNC2LI1 (ENSPPAG00000036384)	ABCG5 (ENSPPAG00000026725) #12	ABCG8 (ENSPPAG00000008092) #13	LRPPRC (ENSPPAG00000040876) #14	PPM1B (ENSPPAG00000043666) #17	SLC3A1 (ENSPPAG00000031561) #18	PREPL (ENSPPAG00000040256) #19	CAMKMT (ENSPPAG00000030930) #20	ENSPPAG00000028854 #22	SIX2 (ENSPPAG00000040393) #23	SRBD1 (ENSPPAG00000038442) #24	PRKCE (ENSPPAG00000032966) #25	EPAS1 (ENSPPAG00000036429) #26	TMEM247 (ENSPPAG00000037594) #27	ATP6V1E2 (ENSPPAG00000033113)	ENSPPAG00000039488 #28	PIGF (ENSPPAG00000042570) #29	CRIPT (ENSPPAG00000027464) #30	SOCS5 (ENSPPAG00000001351) #31	MCFD2 (ENSPPAG00000025149) #34	TTC7A (ENSPPAG00000035331) #35	STPG4 (ENSPPAG00000029033) #36	ENSPPAG00000030799 ##37	EPCAM (ENSPPAG00000029030)
Chimpanzee	MODERN SPECIES	14	HAAO (ENSPTRG00000046058)	ENSPTRG00000049408	ZFP36L2 (ENSPTRG00000051255) #7	ENSPTRG00000051290	THADA (ENSPTRG00000011873) #9	PLEKHH2 (ENSPTRG00000011874) #11	C1GALT1C1L (ENSPTRG00000042938) #10	DYNC2LI1 (ENSPTRG00000011877)	ABCG5 (ENSPTRG00000011878) #12	ABCG8 (ENSPTRG00000011879) #13	LRPPRC (ENSPTRG00000011880) #14	PPM1B (ENSPTRG00000011881) #17	SLC3A1 (ENSPTRG00000011883) #18	PREPL (ENSPTRG00000011884) #19	CAMKMT (ENSPTRG00000011886) #20	SIX3 (ENSPTRG00000011887) #22	ENSPTRG00000043329	SIX2 (ENSPTRG00000011888) #23	SRBD1 (ENSPTRG00000011889) #24	PRKCE (ENSPTRG00000011890) #25	EPAS1 (ENSPTRG00000011891) #26	TMEM247 (ENSPTRG00000011892) #27	ATP6V1E2 (ENSPTRG00000011893)	RHOQ (ENSPTRG00000044328) #28	PIGF (ENSPTRG00000011895) #29	CRIPT (ENSPTRG00000011896) ##30	SOCS5 (ENSPTRG00000040283) #31	MCFD2 (ENSPTRG00000011898) #34	TTC7A (ENSPTRG00000011899) #35	STPG4 (ENSPTRG00000011900) #36	CALM2 (ENSPTRG00000011901) ##37
Platyrrhini	ANCESTRAL SPECIES	13	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00390000003552.ab.b	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Mas night monkey	MODERN SPECIES	500	OXER1 (ENSANAG00000020644)	HAAO (ENSANAG00000023855)	ENSANAG00000022220	ZFP36L2 (ENSANAG00000025228) #7	THADA (ENSANAG00000038155) #9	PLEKHH2 (ENSANAG00000026720) #11	DYNC2LI1 (ENSANAG00000026294)	ABCG5 (ENSANAG00000030896) #12	ABCG8 (ENSANAG00000033135) #13	LRPPRC (ENSANAG00000027440) #14	ENSANAG00000034181	PPM1B (ENSANAG00000025216) #17	SLC3A1 (ENSANAG00000024250) #18	PREPL (ENSANAG00000028709) #19	CAMKMT (ENSANAG00000035113) #20	SIX3 (ENSANAG00000007880) #22	ENSANAG00000033432	SIX2 (ENSANAG00000026129) #23	SRBD1 (ENSANAG00000025573) #24	PRKCE (ENSANAG00000024567) #25	EPAS1 (ENSANAG00000033868) #26
Cebidae	ANCESTRAL SPECIES	15	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00390000003552.ab.b	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Marmoset	MODERN SPECIES	5	OXER1 (ENSCJAG00000014607)	HAAO (ENSCJAG00000014593)	ZFP36L2 (ENSCJAG00000014571) #7	THADA (ENSCJAG00000014464) #9	C1GALT1C1L (ENSCJAG00000054433) #10	PLEKHH2 (ENSCJAG00000014373) #11	DYNC2LI1 (ENSCJAG00000000860)	ABCG5 (ENSCJAG00000000847) #12	ABCG8 (ENSCJAG00000000833) #13	LRPPRC (ENSCJAG00000000794) #14	PPM1B (ENSCJAG00000000781) #17	ENSCJAG00000080387	SLC3A1 (ENSCJAG00000000766) #18	PREPL (ENSCJAG00000000754) #19	CAMKMT (ENSCJAG00000000749) #20	SIX3 (ENSCJAG00000000736) #22	SIX2 (ENSCJAG00000039065) #23	ENSCJAG00000071312	SRBD1 (ENSCJAG00000000727) #24	PRKCE (ENSCJAG00000000724) #25	EPAS1 (ENSCJAG00000000700) #26	TMEM247 (ENSCJAG00000000699) #27	ATP6V1E2 (ENSCJAG00000002587)	RHOQ (ENSCJAG00000044422) #28	PIGF (ENSCJAG00000000680) #29	CRIPT (ENSCJAG00000043662) #30	SOCS5 (ENSCJAG00000042287) #31	ENSCJAG00000077795	MCFD2 (ENSCJAG00000044202) #34	ENSCJAG00000077083	TTC7A (ENSCJAG00000000656) #35
Cebidae_a	ANCESTRAL SPECIES	38	ENSGT00940000154815.a	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00390000003552.ab.b	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Bolivian squirrel monkey	MODERN SPECIES	61	ENSSBOG00000036256	ZFP36L2 (ENSSBOG00000020271) #7	THADA (ENSSBOG00000034696) #9	ENSSBOG00000018933	PLEKHH2 (ENSSBOG00000021126) #11	DYNC2LI1 (ENSSBOG00000027181)	ABCG5 (ENSSBOG00000030125) #12	ABCG8 (ENSSBOG00000015810) #13	ENSSBOG00000029182	LRPPRC (ENSSBOG00000011807) #14	ENSSBOG00000021379	PPM1B (ENSSBOG00000026813) #17	SLC3A1 (ENSSBOG00000036035) #18	PREPL (ENSSBOG00000031995) #19	CAMKMT (ENSSBOG00000026695) #20	SIX3 (ENSSBOG00000034775) #22	ENSSBOG00000029291	SIX2 (ENSSBOG00000034280) #23	SRBD1 (ENSSBOG00000024982) #24	PRKCE (ENSSBOG00000022902) #25	EPAS1 (ENSSBOG00000022669) #26	TMEM247 (ENSSBOG00000020562) #27	ATP6V1E2 (ENSSBOG00000009180)	RHOQ (ENSSBOG00000034835) #28	ENSSBOG00000018440 #29	CRIPT (ENSSBOG00000032153) ##30	SOCS5 (ENSSBOG00000017209) #31	ENSSBOG00000020881	MCFD2 (ENSSBOG00000022762) #34	TTC7A (ENSSBOG00000029390) #35	STPG4 (ENSSBOG00000001933) #36
Capuchin	MODERN SPECIES	172	KCNG3 (ENSCCAG00000034485)	MTA3 (ENSCCAG00000034719)	HAAO (ENSCCAG00000021564)	ZFP36L2 (ENSCCAG00000027388) #7	THADA (ENSCCAG00000035905) #9	PLEKHH2 (ENSCCAG00000037101) #11	DYNC2LI1 (ENSCCAG00000025429)	ABCG5 (ENSCCAG00000000388) #12	ABCG8 (ENSCCAG00000009978) #13	LRPPRC (ENSCCAG00000031900) #14	ENSCCAG00000017947	PPM1B (ENSCCAG00000022718) #17	SLC3A1 (ENSCCAG00000012105) #18	PREPL (ENSCCAG00000028206) #19	CAMKMT (ENSCCAG00000025675) #20	SIX3 (ENSCCAG00000025607) #22	SIX2 (ENSCCAG00000021305) #23	ENSCCAG00000027222	SRBD1 (ENSCCAG00000025589) #24	ENSCCAG00000023830 #25
Strepsirrhini	ANCESTRAL SPECIES	13	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00550000074964.i.a	ENSGT00940000155145 #10	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c.g
Lemuriformes	ANCESTRAL SPECIES	23	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00550000074964.i.a	ENSGT00940000155145 #10	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c.g
Lemuriformes_a	ANCESTRAL SPECIES	10	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00550000074964.i.a	ENSGT00940000155145 #10	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c.g
Greater bamboo lemur	MODERN SPECIES	928	KCNG3 (ENSPSMG00000006730)	MTA3 (ENSPSMG00000006820)	HAAO (ENSPSMG00000006899)	ZFP36L2 (ENSPSMG00000006914) #7	THADA (ENSPSMG00000007072) #9	PLEKHH2 (ENSPSMG00000007353) #11	C1GALT1C1L (ENSPSMG00000007362) #10	DYNC2LI1 (ENSPSMG00000007408)	ABCG5 (ENSPSMG00000007454) #12	ABCG8 (ENSPSMG00000007486) #13	LRPPRC (ENSPSMG00000008019) #14	PPM1B (ENSPSMG00000008363) #17	SLC3A1 (ENSPSMG00000008424) #18	PREPL (ENSPSMG00000008664) #19	CAMKMT (ENSPSMG00000008779) #20	SIX3 (ENSPSMG00000008814) #22	SIX2 (ENSPSMG00000008821) #23	SRBD1 (ENSPSMG00000008842) #24	ENSPSMG00000008850	PRKCE (ENSPSMG00000008894) #25	EPAS1 (ENSPSMG00000008957) #26	TMEM247 (ENSPSMG00000008968) #27	ATP6V1E2 (ENSPSMG00000008970)	RHOQ (ENSPSMG00000008980) #28	PIGF (ENSPSMG00000008994) #29
Coquerels sifaka	MODERN SPECIES	579	ENSPCOG00000007681	MTA3 (ENSPCOG00000017679)	ENSPCOG00000027393	HAAO (ENSPCOG00000012942)	ZFP36L2 (ENSPCOG00000015409) #7	THADA (ENSPCOG00000020158) #9	PLEKHH2 (ENSPCOG00000021107) #11	DYNC2LI1 (ENSPCOG00000015048)	ABCG5 (ENSPCOG00000025885) #12	ABCG8 (ENSPCOG00000021771) #13	LRPPRC (ENSPCOG00000001309) #14	PPM1B (ENSPCOG00000005650) #17	SLC3A1 (ENSPCOG00000000153) #18	PREPL (ENSPCOG00000024601) #19	CAMKMT (ENSPCOG00000020417) #20	SIX3 (ENSPCOG00000014666) #22	SIX2 (ENSPCOG00000024885) #23	SRBD1 (ENSPCOG00000017669) #24	PRKCE (ENSPCOG00000025484) #25	EPAS1 (ENSPCOG00000014110) #26	TMEM247 (ENSPCOG00000022728) #27	RHOQ (ENSPCOG00000025602) #28	ENSPCOG00000005830 #29	ENSPCOG00000018586 #30	ENSPCOG00000012817 #31
Mouse lemur	MODERN SPECIES	30	MTA3 (ENSMICG00000006534)	HAAO (ENSMICG00000006554)	ENSMICG00000034373 #7	THADA (ENSMICG00000010352) #9	ENSMICG00000026457	PLEKHH2 (ENSMICG00000010406) #11	DYNC2LI1 (ENSMICG00000010444)	ABCG5 (ENSMICG00000010457) #12	ABCG8 (ENSMICG00000010470) #13	LRPPRC (ENSMICG00000010486) #14	PPM1B (ENSMICG00000008341) #17	SLC3A1 (ENSMICG00000004923) #18	PREPL (ENSMICG00000004928) #19	ENSMICG00000036453	CAMKMT (ENSMICG00000034768) #20	SIX3 (ENSMICG00000044561) #22	SIX2 (ENSMICG00000042100) #23	SRBD1 (ENSMICG00000007835) #24	PRKCE (ENSMICG00000007855) #25	EPAS1 (ENSMICG00000002949) #26	TMEM247 (ENSMICG00000046688) #27	RHOQ (ENSMICG00000048011) #28	CRIPT (ENSMICG00000046155) #30	PIGF (ENSMICG00000009128) #29	SOCS5 (ENSMICG00000004709) #31	MCFD2 (ENSMICG00000009145) #34	TTC7A (ENSMICG00000009149) #35	STPG4 (ENSMICG00000031193) #36	ENSMICG00000000397	ENSMICG00000047661	EPCAM (ENSMICG00000000151)
Bushbaby	MODERN SPECIES	139	KCNG3 (ENSOGAG00000031627)	MTA3 (ENSOGAG00000005363)	HAAO (ENSOGAG00000005370)	ZFP36L2 (ENSOGAG00000028804) #7	THADA (ENSOGAG00000013182) #9	PLEKHH2 (ENSOGAG00000004623) #11	C1GALT1C1L (ENSOGAG00000026191) #10	ENSOGAG00000029378	DYNC2LI1 (ENSOGAG00000012787)	ABCG5 (ENSOGAG00000012791) #12	ABCG8 (ENSOGAG00000012795) #13	ENSOGAG00000012798	PPM1B (ENSOGAG00000002613) #17	SLC3A1 (ENSOGAG00000028039) #18	PREPL (ENSOGAG00000008772) #19	SIX3 (ENSOGAG00000025984) #22	SIX2 (ENSOGAG00000034436) #23	SRBD1 (ENSOGAG00000001076) #24	ENSOGAG00000026831	ENSOGAG00000029209 #25	PRKCE (ENSOGAG00000008081) #25	EPAS1 (ENSOGAG00000008084) #26	TMEM247 (ENSOGAG00000033557) #27	ATP6V1E2 (ENSOGAG00000008085)	RHOQ (ENSOGAG00000033272) #28	PIGF (ENSOGAG00000026734) #29	CRIPT (ENSOGAG00000008089) #30	SOCS5 (ENSOGAG00000010860) #31	MCFD2 (ENSOGAG00000009252) #34	TTC7A (ENSOGAG00000008818) #35	STPG4 (ENSOGAG00000034812) #36
Euarchontoglires_A	ANCESTRAL SPECIES	14	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00390000016775	ENSGT00910000148371	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00950000185367	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Glires	ANCESTRAL SPECIES	13	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00390000016775	ENSGT00910000148371	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00950000185367	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Rodentia	ANCESTRAL SPECIES	15	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Rodentia_B	ANCESTRAL SPECIES	14	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Myomorpha	ANCESTRAL SPECIES	24	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Muroidea	ANCESTRAL SPECIES	21	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Muroidea_A	ANCESTRAL SPECIES	24	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Murinae	ANCESTRAL SPECIES	8	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Mus	ANCESTRAL SPECIES	16	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00860000136128	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Shrew mouse	MODERN SPECIES	9	MGP_PahariEiJ_G0020907	Kcng3 (MGP_PahariEiJ_G0020908)	Mta3 (MGP_PahariEiJ_G0020909)	Haao (MGP_PahariEiJ_G0020910)	Zfp36l2 (MGP_PahariEiJ_G0020911) #7	Thada (MGP_PahariEiJ_G0020912) #9	Plekhh2 (MGP_PahariEiJ_G0020913) #11	Dync2li1 (MGP_PahariEiJ_G0020914)	Abcg5 (MGP_PahariEiJ_G0020915) #12	Abcg8 (MGP_PahariEiJ_G0020916) #13	Lrpprc (MGP_PahariEiJ_G0020917) #14	Ppm1b (MGP_PahariEiJ_G0020918) #17	Slc3a1 (MGP_PahariEiJ_G0020919) #18	Prepl (MGP_PahariEiJ_G0020920) #19	Camkmt (MGP_PahariEiJ_G0020921) #20	Six3 (MGP_PahariEiJ_G0020922) #22	Six2 (MGP_PahariEiJ_G0020923) #23	Srbd1 (MGP_PahariEiJ_G0020924) #24	Prkce (MGP_PahariEiJ_G0020925) #25	MGP_PahariEiJ_G0020926	Epas1 (MGP_PahariEiJ_G0020927) #26	Tmem247 (MGP_PahariEiJ_G0020928) #27	Atp6v1e2 (MGP_PahariEiJ_G0020929)	Rhoq (MGP_PahariEiJ_G0020930) #28	Pigf (MGP_PahariEiJ_G0020931) #29	Cript (MGP_PahariEiJ_G0020932) #30	Socs5 (MGP_PahariEiJ_G0020933) #31	Mcfd2 (MGP_PahariEiJ_G0020934) #34	Ttc7 (MGP_PahariEiJ_G0020935) #35	Stpg4 (MGP_PahariEiJ_G0020936) #36	Calm2 (MGP_PahariEiJ_G0020937) #37
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00860000136128	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b.cb #37
Ryukyu mouse	MODERN SPECIES	8	Cox7a2l (MGP_CAROLIEiJ_G0021917)	Kcng3 (MGP_CAROLIEiJ_G0021918)	Mta3 (MGP_CAROLIEiJ_G0021919)	Haao (MGP_CAROLIEiJ_G0021920)	Zfp36l2 (MGP_CAROLIEiJ_G0021921) #7	Thada (MGP_CAROLIEiJ_G0021922) #9	Plekhh2 (MGP_CAROLIEiJ_G0021923) #11	Dync2li1 (MGP_CAROLIEiJ_G0021924)	Abcg5 (MGP_CAROLIEiJ_G0021925) #12	Abcg8 (MGP_CAROLIEiJ_G0021926) #13	Lrpprc (MGP_CAROLIEiJ_G0021927) #14	Ppm1b (MGP_CAROLIEiJ_G0021928) #17	Slc3a1 (MGP_CAROLIEiJ_G0021929) #18	Prepl (MGP_CAROLIEiJ_G0021930) #19	Camkmt (MGP_CAROLIEiJ_G0021931) #20	Six3 (MGP_CAROLIEiJ_G0021932) #22	Six2 (MGP_CAROLIEiJ_G0021933) #23	Srbd1 (MGP_CAROLIEiJ_G0021934) #24	Prkce (MGP_CAROLIEiJ_G0021935) #25	MGP_CAROLIEiJ_G0021936	Epas1 (MGP_CAROLIEiJ_G0021937) #26	Tmem247 (MGP_CAROLIEiJ_G0021938) #27	Atp6v1e2 (MGP_CAROLIEiJ_G0021939)	Rhoq (MGP_CAROLIEiJ_G0021940) #28	Pigf (MGP_CAROLIEiJ_G0021941) #29	Cript (MGP_CAROLIEiJ_G0021942) #30	Socs5 (MGP_CAROLIEiJ_G0021943) #31	Mcfd2 (MGP_CAROLIEiJ_G0021944) #34	Ttc7 (MGP_CAROLIEiJ_G0021945) #35	Stpg4 (MGP_CAROLIEiJ_G0021946) #36	Calm2 (MGP_CAROLIEiJ_G0021947) #37
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00860000136128	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b.cb #37
Mouse	MODERN SPECIES	8	Cox7a2l (ENSMUSG00000024248)	Kcng3 (ENSMUSG00000045053)	Mta3 (ENSMUSG00000055817)	Haao (ENSMUSG00000000673)	Zfp36l2 (ENSMUSG00000045817) #7	Thada (ENSMUSG00000024251) #9	Plekhh2 (ENSMUSG00000040852) #11	Dync2li1 (ENSMUSG00000024253)	Abcg5 (ENSMUSG00000040505) #12	Abcg8 (ENSMUSG00000024254) #13	Lrpprc (ENSMUSG00000024120) #14	Ppm1b (ENSMUSG00000061130) #17	Slc3a1 (ENSMUSG00000024131) #18	Prepl (ENSMUSG00000024127) #19	Camkmt (ENSMUSG00000071037) #20	Six3 (ENSMUSG00000038805) #22	Six2 (ENSMUSG00000024134) #23	Srbd1 (ENSMUSG00000024135) #24	Prkce (ENSMUSG00000045038) #25	Epas1 (ENSMUSG00000024140) #26	Tmem247 (ENSMUSG00000037689) #27	Atp6v1e2 (ENSMUSG00000053375)	Rhoq (ENSMUSG00000024143) #28	Pigf (ENSMUSG00000024145) #29	Cript (ENSMUSG00000024146) #30	Socs5 (ENSMUSG00000037104) #31	Mcfd2 (ENSMUSG00000024150) #34	Ttc7 (ENSMUSG00000036918) #35	Stpg4 (ENSMUSG00000036557) #36	Calm2 (ENSMUSG00000036438) #37	Epcam (ENSMUSG00000045394)
Mus_C	ANCESTRAL SPECIES	9	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00860000136128	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b.cb #37
Steppe mouse	MODERN SPECIES	30	Zfp36l2 (ENSMSIG00000011727) #7	Thada (ENSMSIG00000011599) #9	Plekhh2 (ENSMSIG00000011544) #11	Dync2li1 (ENSMSIG00000011510)	Abcg5 (ENSMSIG00000011426) #12	Abcg8 (ENSMSIG00000011323) #13	Lrpprc (ENSMSIG00000011282) #14	ENSMSIG00000011205	ENSMSIG00000011192	Ppm1b (ENSMSIG00000011155) #17	ENSMSIG00000011147	Slc3a1 (ENSMSIG00000011117) #18	Prepl (ENSMSIG00000011056) #19	Camkmt (ENSMSIG00000011028) #20	ENSMSIG00000010998	Six3 (ENSMSIG00000010902) #22	Six2 (ENSMSIG00000010893) #23	ENSMSIG00000010891	ENSMSIG00000010853	Srbd1 (ENSMSIG00000010750) #24	ENSMSIG00000010740	Prkce (ENSMSIG00000010675) #25	Epas1 (ENSMSIG00000010616) #26	Tmem247 (ENSMSIG00000010600) #27	Atp6v1e2 (ENSMSIG00000010576)	Rhoq (ENSMSIG00000010557) #28	Pigf (ENSMSIG00000010538) #29	Cript (ENSMSIG00000010490) #30	Socs5 (ENSMSIG00000010466) #31	Mcfd2 (ENSMSIG00000010432) #34	Ttc7 (ENSMSIG00000010241) #35
spretus	MODERN SPECIES	8	Cox7a2l (MGP_SPRETEiJ_G0022833)	Kcng3 (MGP_SPRETEiJ_G0022834)	Mta3 (MGP_SPRETEiJ_G0022835)	Haao (MGP_SPRETEiJ_G0022836)	Zfp36l2 (MGP_SPRETEiJ_G0022837) #7	Thada (MGP_SPRETEiJ_G0022838) #9	Plekhh2 (MGP_SPRETEiJ_G0022839) #11	Dync2li1 (MGP_SPRETEiJ_G0022840)	Abcg5 (MGP_SPRETEiJ_G0022841) #12	Abcg8 (MGP_SPRETEiJ_G0022842) #13	Lrpprc (MGP_SPRETEiJ_G0022843) #14	Ppm1b (MGP_SPRETEiJ_G0022844) #17	Slc3a1 (MGP_SPRETEiJ_G0022845) #18	Prepl (MGP_SPRETEiJ_G0022846) #19	Camkmt (MGP_SPRETEiJ_G0022847) #20	Six3 (MGP_SPRETEiJ_G0022848) #22	Six2 (MGP_SPRETEiJ_G0022849) #23	Srbd1 (MGP_SPRETEiJ_G0022850) #24	Prkce (MGP_SPRETEiJ_G0022851) #25	MGP_SPRETEiJ_G0022852	Epas1 (MGP_SPRETEiJ_G0022853) #26	Tmem247 (MGP_SPRETEiJ_G0022854) #27	Atp6v1e2 (MGP_SPRETEiJ_G0022855)	Rhoq (MGP_SPRETEiJ_G0022856) #28	Pigf (MGP_SPRETEiJ_G0022857) #29	Cript (MGP_SPRETEiJ_G0022858) #30	Socs5 (MGP_SPRETEiJ_G0022859) #31	Mcfd2 (MGP_SPRETEiJ_G0022860) #34	Ttc7 (MGP_SPRETEiJ_G0022861) #35	Stpg4 (MGP_SPRETEiJ_G0022862) #36	Calm2 (MGP_SPRETEiJ_G0022863) #37
Rat	MODERN SPECIES	16	Cox7a2l (ENSRNOG00000004526)	Kcng3 (ENSRNOG00000004535)	Mta3 (ENSRNOG00000004685)	Haao (ENSRNOG00000031263)	Zfp36l2 (ENSRNOG00000005067) #7	Thada (ENSRNOG00000025899) #9	Plekhh2 (ENSRNOG00000005124) #11	Dync2li1 (ENSRNOG00000005151)	Abcg5 (ENSRNOG00000005250) #12	Abcg8 (ENSRNOG00000005420) #13	Lrpprc (ENSRNOG00000005877) #14	Ppm1b (ENSRNOG00000030667) #17	Slc3a1 (ENSRNOG00000007006) #18	Prepl (ENSRNOG00000007326) #19	Camkmt (ENSRNOG00000030629) #20	Six3 (ENSRNOG00000057031) #22	Six2 (ENSRNOG00000068029) #23	Srbd1 (ENSRNOG00000014720) #24	Prkce (ENSRNOG00000015603) #25	Epas1 (ENSRNOG00000021318) #26	Tmem247 (ENSRNOG00000046926) #27	Atp6v1e2 (ENSRNOG00000015566)	Pigf (ENSRNOG00000015325) #29	Cript (ENSRNOG00000015215) #30	Socs5 (ENSRNOG00000028504) #31	Mcfd2 (ENSRNOG00000015059) #34	Ttc7a (ENSRNOG00000014879) #35	Stpg4 (ENSRNOG00000040136) #36	Calm2 (ENSRNOG00000067086) #37	Epcam (ENSRNOG00000015667)	Msh2 (ENSRNOG00000015796)
Cricetidae	ANCESTRAL SPECIES	24	ENSGT00940000154815.a	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00940000154815.a	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Chinese hamster chok1gshd	MODERN SPECIES	2	Kcng3 (ENSCGRG00001022671)	Mta3 (ENSCGRG00001014465)	Haao (ENSCGRG00001018533)	Zfp36l2 (ENSCGRG00001023281) #7	Thada (ENSCGRG00001019927) #9	ENSCGRG00001017012	Plekhh2 (ENSCGRG00001007378) #11	Dync2li1 (ENSCGRG00001023127)	Abcg5 (ENSCGRG00001022728) #12	Abcg8 (ENSCGRG00001003896) #13	ENSCGRG00001016261	Ppm1b (ENSCGRG00001000688) #17	Slc3a1 (ENSCGRG00001009528) #18	Prepl (ENSCGRG00001013703) #19	Camkmt (ENSCGRG00001019060) #20	Six3 (ENSCGRG00001019967) #22	Six2 (ENSCGRG00001022401) #23	Srbd1 (ENSCGRG00001000513) #24	Prkce (ENSCGRG00001014768) #25	Epas1 (ENSCGRG00001021169) #26	Tmem247 (ENSCGRG00001024175) #27	Atp6v1e2 (ENSCGRG00001008046)	Rhoq (ENSCGRG00001001618) #28	Pigf (ENSCGRG00001005447) #29	ENSCGRG00001019564 ##30	Socs5 (ENSCGRG00001010671) #31	Mcfd2 (ENSCGRG00001022506) #34	Ttc7 (ENSCGRG00001024318) #35	Stpg4 (ENSCGRG00001014859) #36	ENSCGRG00001012854 #37	Epcam (ENSCGRG00001015160)
Golden Hamster	MODERN SPECIES	687	Eml4 (ENSMAUG00000013403)	Cox7a2l (ENSMAUG00000018428)	Kcng3 (ENSMAUG00000014985)	ENSMAUG00000016202	Haao (ENSMAUG00000019266)	Thada (ENSMAUG00000000902) #9	Plekhh2 (ENSMAUG00000016952) #11	Dync2li1 (ENSMAUG00000019240)	Abcg5 (ENSMAUG00000000867) #12	Abcg8 (ENSMAUG00000004668) #13	Lrpprc (ENSMAUG00000012118) #14	Ppm1b (ENSMAUG00000009214) #17	Slc3a1 (ENSMAUG00000010366) #18	Prepl (ENSMAUG00000007016) #19	Camkmt (ENSMAUG00000009845) #20	Six3 (ENSMAUG00000011873) #22	Six2 (ENSMAUG00000010227) #23	Srbd1 (ENSMAUG00000013916) #24	ENSMAUG00000019109 #25	Prkce (ENSMAUG00000000294) #25	Epas1 (ENSMAUG00000015168) #26	Atp6v1e2 (ENSMAUG00000016357)	Rhoq (ENSMAUG00000006277) #28	Pigf (ENSMAUG00000017287) #29	Cript (ENSMAUG00000018736) #30	Socs5 (ENSMAUG00000014386) #31	Ttc7 (ENSMAUG00000015013) #35	Stpg4 (ENSMAUG00000018310) #36	Calm2 (ENSMAUG00000019415) #37	Epcam (ENSMAUG00000000320)	Msh2 (ENSMAUG00000019403)
Cricetidae_B	ANCESTRAL SPECIES	39	ENSGT00940000154815.a	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Prairie vole	MODERN SPECIES	3	Msrb2 (ENSMOCG00000002345)	Ptf1a (ENSMOCG00000021307)	4921504E06Rik (ENSMOCG00000022878)	ENSMOCG00000019005	Plekhh2 (ENSMOCG00000021081) #11	ENSMOCG00000022049	Dync2li1 (ENSMOCG00000008462)	Abcg5 (ENSMOCG00000014554) #12	Abcg8 (ENSMOCG00000006071) #13	ENSMOCG00000006048	Ppm1b (ENSMOCG00000004793) #17	Slc3a1 (ENSMOCG00000016321) #18	Prepl (ENSMOCG00000003160) #19	Camkmt (ENSMOCG00000019864) #20	ENSMOCG00000021682	Six3 (ENSMOCG00000003464) #22	Six2 (ENSMOCG00000012865) #23	Srbd1 (ENSMOCG00000018716) #24	Prkce (ENSMOCG00000010243) #25	Epas1 (ENSMOCG00000018764) #26	Tmem247 (ENSMOCG00000003264) #27	Atp6v1e2 (ENSMOCG00000012541)	Rhoq (ENSMOCG00000000818) #28	Pigf (ENSMOCG00000014964) #29	Cript (ENSMOCG00000001266) #30	Socs5 (ENSMOCG00000007202) #31	Mcfd2 (ENSMOCG00000012996) #34	Ttc7 (ENSMOCG00000019798) #35	Stpg4 (ENSMOCG00000006592) #36	Calm2 (ENSMOCG00000007388) #37	Epcam (ENSMOCG00000017750)
Northern American deer mouse	MODERN SPECIES	14	Mta3 (ENSPEMG00000012453)	Haao (ENSPEMG00000023867)	Zfp36l2 (ENSPEMG00000018068) #7	Thada (ENSPEMG00000023105) #9	Plekhh2 (ENSPEMG00000021349) #11	Dync2li1 (ENSPEMG00000020786)	Abcg5 (ENSPEMG00000009800) #12	Abcg8 (ENSPEMG00000022497) #13	Lrpprc (ENSPEMG00000022720) #14	Ppm1b (ENSPEMG00000020608) #17	ENSPEMG00000007155	ENSPEMG00000030100	Slc3a1 (ENSPEMG00000024006) #18	Prepl (ENSPEMG00000017041) #19	Camkmt (ENSPEMG00000022975) #20	Six3 (ENSPEMG00000008718) #22	Six2 (ENSPEMG00000027506) #23	Srbd1 (ENSPEMG00000020684) #24	Prkce (ENSPEMG00000020491) #25	Epas1 (ENSPEMG00000020696) #26	Tmem247 (ENSPEMG00000020426) #27	Atp6v1e2 (ENSPEMG00000016186)	Rhoq (ENSPEMG00000030964) #28	Pigf (ENSPEMG00000020361) #29	Cript (ENSPEMG00000021196) #30	Socs5 (ENSPEMG00000027632) #31	Mcfd2 (ENSPEMG00000026904) #34	Ttc7 (ENSPEMG00000023689) #35	Stpg4 (ENSPEMG00000020631) #36	Calm2 (ENSPEMG00000010363) #37	Msh2 (ENSPEMG00000015577)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1826									Abcg5 (ENSNGAG00000023100) #12	Abcg8 (ENSNGAG00000022447) #13	Lrpprc (ENSNGAG00000013069) #14	Ppm1b (ENSNGAG00000021888) #17	Slc3a1 (ENSNGAG00000022072) #18	Prepl (ENSNGAG00000015017) #19	Camkmt (ENSNGAG00000021314) #20	Six3 (ENSNGAG00000012779) #22	Six2 (ENSNGAG00000021038) #23	Srbd1 (ENSNGAG00000011893) #24	Prkce (ENSNGAG00000007204) #25	Epas1 (ENSNGAG00000023700) #26	Tmem247 (ENSNGAG00000014461) #27	Rhoq (ENSNGAG00000021179) #28	Pigf (ENSNGAG00000014181) #29	Cript (ENSNGAG00000021623) ##30	Socs5 (ENSNGAG00000021811) #31	Mcfd2 (ENSNGAG00000020905) #34	Ttc7 (ENSNGAG00000020345) #35	Stpg4 (ENSNGAG00000023496) #36	Calm2 (ENSNGAG00000020613) #37	Epcam (ENSNGAG00000012351)	Msh2 (ENSNGAG00000020810)
Kangaroo rat	MODERN SPECIES	356	Cox7a2l (ENSDORG00000030042)	Kcng3 (ENSDORG00000009032)	Mta3 (ENSDORG00000006403)	Haao (ENSDORG00000006406)	Zfp36l2 (ENSDORG00000027040) #7	ENSDORG00000005991 #9	Plekhh2 (ENSDORG00000012222) #11	Dync2li1 (ENSDORG00000012227)	Abcg5 (ENSDORG00000012231) #12	Abcg8 (ENSDORG00000012232) #13	Lrpprc (ENSDORG00000012233) #14	Ppm1b (ENSDORG00000024844) #17	Slc3a1 (ENSDORG00000003116) #18	Prepl (ENSDORG00000003117) #19	Camkmt (ENSDORG00000003119) #20	Six3 (ENSDORG00000026527) #22	Six2 (ENSDORG00000005524) #23	Srbd1 (ENSDORG00000010468) #24	Prkce (ENSDORG00000010474) #25	Epas1 (ENSDORG00000003635) #26	Tmem247 (ENSDORG00000000832) #27	Rhoq (ENSDORG00000026960) #28	Pigf (ENSDORG00000006083) #29	ENSDORG00000006085 #30	Socs5 (ENSDORG00000028708) #31	Mcfd2 (ENSDORG00000026885) #34	Ttc7 (ENSDORG00000010053) #35	Stpg4 (ENSDORG00000010057) #36	Calm2 (ENSDORG00000010058) #37	Epcam (ENSDORG00000006849)	Msh2 (ENSDORG00000006850)
Rodentia_A	ANCESTRAL SPECIES	14	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Hystricomorpha	ANCESTRAL SPECIES	8	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000016775	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Naked mole-rat female	MODERN SPECIES	23	HAAO (ENSHGLG00000042032)	ZFP36L2 (ENSHGLG00000035572) #7	THADA (ENSHGLG00000005656) #9	PLEKHH2 (ENSHGLG00000007771) #11	ENSHGLG00000012261	DYNC2LI1 (ENSHGLG00000010574)	ENSHGLG00000047117	ABCG5 (ENSHGLG00000018455) #12	ABCG8 (ENSHGLG00000016760) #13	LRPPRC (ENSHGLG00000006123) #14	ENSHGLG00000039009	PPM1B (ENSHGLG00000009834) #17	SLC3A1 (ENSHGLG00000017221) #18	PREPL (ENSHGLG00000017302) #19	CAMKMT (ENSHGLG00000017750) #20	SIX3 (ENSHGLG00000017838) #22	SIX2 (ENSHGLG00000018034) #23	ENSHGLG00000020752	SRBD1 (ENSHGLG00000018153) #24	ENSHGLG00000033516 #25	PRKCE (ENSHGLG00000005958) #25	ENSHGLG00000037274	EPAS1 (ENSHGLG00000007510) #26	ENSHGLG00000005572	ENSHGLG00000036650 #27	ATP6V1E2 (ENSHGLG00000050960)	RHOQ (ENSHGLG00000033850) #28	ENSHGLG00000010143 #29	CRIPT (ENSHGLG00000037711) ##30	SOCS5 (ENSHGLG00000006519) #31	ENSHGLG00000000631
Hystricomorpha_a	ANCESTRAL SPECIES	31	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000016775	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c	ENSGT00550000074867
Guinea pig	MODERN SPECIES	18	COX7A2L (ENSCPOG00000038148)	KCNG3 (ENSCPOG00000012440)	MTA3 (ENSCPOG00000005357)	HAAO (ENSCPOG00000024944)	ZFP36L2 (ENSCPOG00000022038) #7	THADA (ENSCPOG00000000838) #9	PLEKHH2 (ENSCPOG00000013966) #11	DYNC2LI1 (ENSCPOG00000000202)	ABCG5 (ENSCPOG00000025027) #12	ABCG8 (ENSCPOG00000000203) #13	ENSCPOG00000000204	PPM1B (ENSCPOG00000009259) #17	SLC3A1 (ENSCPOG00000009505) #18	PREPL (ENSCPOG00000009510) #19	CAMKMT (ENSCPOG00000009522) #20	SIX3 (ENSCPOG00000022943) #22	SIX2 (ENSCPOG00000015548) #23	ENSCPOG00000023392 #37	SRBD1 (ENSCPOG00000004773) #24	PRKCE (ENSCPOG00000024627) #25	EPAS1 (ENSCPOG00000014242) #26	ATP6V1E2 (ENSCPOG00000019930)	RHOQ (ENSCPOG00000008075) #28	PIGF (ENSCPOG00000035095) #29	CRIPT (ENSCPOG00000008081) #30	SOCS5 (ENSCPOG00000031517) #31	MCFD2 (ENSCPOG00000039174) #34	TTC7A (ENSCPOG00000012175) #35	STPG4 (ENSCPOG00000020691) #36	ENSCPOG00000012181 #37	EPCAM (ENSCPOG00000003748)
Hystricomorpha_b	ANCESTRAL SPECIES	26	ENSGT00940000158434	ENSGT00940000154815.a	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00390000016775	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j.q #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000164310.e	ENSGT00390000018245.c
Long-tailed chinchilla	MODERN SPECIES	148	COX7A2L (ENSCLAG00000003724)	KCNG3 (ENSCLAG00000003752)	MTA3 (ENSCLAG00000003852)	HAAO (ENSCLAG00000004095)	THADA (ENSCLAG00000004283) #9	PLEKHH2 (ENSCLAG00000004558) #11	DYNC2LI1 (ENSCLAG00000004757)	ABCG5 (ENSCLAG00000004847) #12	ABCG8 (ENSCLAG00000005006) #13	ENSCLAG00000005203	ENSCLAG00000005433	PPM1B (ENSCLAG00000005603) #17	SLC3A1 (ENSCLAG00000017334) #18	PREPL (ENSCLAG00000015874) #19	CAMKMT (ENSCLAG00000016221) #20	SIX3 (ENSCLAG00000016438) #22	SIX2 (ENSCLAG00000016522) #23	SRBD1 (ENSCLAG00000008623) #24	PRKCE (ENSCLAG00000009012) #25	EPAS1 (ENSCLAG00000009259) #26	ATP6V1E2 (ENSCLAG00000009478)	RHOQ (ENSCLAG00000009535) #28	ENSCLAG00000009602 #29	ENSCLAG00000009692 #30	SOCS5 (ENSCLAG00000009878) #31	MCFD2 (ENSCLAG00000009903) #34	TTC7A (ENSCLAG00000007527) #35	STPG4 (ENSCLAG00000007677) #36	ENSCLAG00000007800	EPCAM (ENSCLAG00000003018)	MSH2 (ENSCLAG00000003069)
Degu	MODERN SPECIES	61	DYNC2LI1 (ENSODEG00000011054)	ABCG5 (ENSODEG00000010535) #12	ABCG8 (ENSODEG00000012555) #13	LRPPRC (ENSODEG00000011211) #14	ENSODEG00000019947	ENSODEG00000020039	ENSODEG00000011737	PPM1B (ENSODEG00000012106) #17	SLC3A1 (ENSODEG00000011768) #18	PREPL (ENSODEG00000012834) #19	ENSODEG00000019894	ENSODEG00000019899	CAMKMT (ENSODEG00000013111) #20	ENSODEG00000019927	ENSODEG00000019924	SIX3 (ENSODEG00000011611) #22	SIX2 (ENSODEG00000011970) #23	ENSODEG00000012336	SRBD1 (ENSODEG00000012095) #24	PRKCE (ENSODEG00000011779) #25	EPAS1 (ENSODEG00000011675) #26	RHOQ (ENSODEG00000012565) #28	ENSODEG00000013963 #29	ENSODEG00000011714 #30	SOCS5 (ENSODEG00000019978) #31	ENSODEG00000011724 #34	TTC7A (ENSODEG00000011584) #35	STPG4 (ENSODEG00000012221) #36	CALM2 (ENSODEG00000013273) #37	EPCAM (ENSODEG00000015335)	MSH2 (ENSODEG00000012853)
Sciuridae	ANCESTRAL SPECIES	16	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a.b #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Eurasian red squirrel	MODERN SPECIES	5	ENSSVLG00005024857 #9	ENSSVLG00005024832	ENSSVLG00005024807	PLEKHH2 (ENSSVLG00005024692) #11	DYNC2LI1 (ENSSVLG00005024631)	ABCG5 (ENSSVLG00005024576) #12	ABCG8 (ENSSVLG00005024523) #13	LRPPRC (ENSSVLG00005024277) #14	PPM1B (ENSSVLG00005024210) #17	ENSSVLG00005024186	ENSSVLG00005024165	ENSSVLG00005024144	SLC3A1 (ENSSVLG00005023978) #18	PREPL (ENSSVLG00005023745) #19	CAMKMT (ENSSVLG00005023645) #20	SIX3 (ENSSVLG00005023628) #22	SIX2 (ENSSVLG00005023608) #23	ENSSVLG00005023584	SRBD1 (ENSSVLG00005023450) #24	PRKCE (ENSSVLG00005023394) #25	EPAS1 (ENSSVLG00005023349) #26	TMEM247 (ENSSVLG00005023317) #27	ATP6V1E2 (ENSSVLG00005023299)	RHOQ (ENSSVLG00005023285) #28	PIGF (ENSSVLG00005023252) #29	ENSSVLG00005023214 #30	SOCS5 (ENSSVLG00005023198) #31	MCFD2 (ENSSVLG00005023123) #34	TTC7A (ENSSVLG00005023062) #35	STPG4 (ENSSVLG00005022983) #36	ENSSVLG00005022866 #37
Marmotini	ANCESTRAL SPECIES	14	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a.b #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617.i #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Marmotini_b	ANCESTRAL SPECIES	95	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a.b #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617.i #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Arctic ground squirrel	MODERN SPECIES	38						PLEKHH2 (ENSUPAG00010020885) #11	DYNC2LI1 (ENSUPAG00010020862)	ABCG5 (ENSUPAG00010020836) #12	ABCG8 (ENSUPAG00010020814) #13	LRPPRC (ENSUPAG00010020805) #14	PPM1B (ENSUPAG00010020794) #17	ENSUPAG00010020790	SLC3A1 (ENSUPAG00010020779) #18	PREPL (ENSUPAG00010020766) #19	CAMKMT (ENSUPAG00010020755) #20	SIX3 (ENSUPAG00010020729) #22	SIX2 (ENSUPAG00010020725) #23	ENSUPAG00010020717 #24	ENSUPAG00010020701 #24	PRKCE (ENSUPAG00010020686) #25	EPAS1 (ENSUPAG00010020676) #26	TMEM247 (ENSUPAG00010020670) #27	ATP6V1E2 (ENSUPAG00010020666)	RHOQ (ENSUPAG00010020662) #28	ENSUPAG00010020656 #29	ENSUPAG00010020646 #30	SOCS5 (ENSUPAG00010020643) #31	MCFD2 (ENSUPAG00010020633) #34	TTC7A (ENSUPAG00010020623) #35	STPG4 (ENSUPAG00010020605) #36	ENSUPAG00010020594 #37
Squirrel	MODERN SPECIES	108	ENSSTOG00000012922	KCNG3 (ENSSTOG00000012925)	MTA3 (ENSSTOG00000012978)	HAAO (ENSSTOG00000005828)	ZFP36L2 (ENSSTOG00000024603) #7	THADA (ENSSTOG00000003121) #9	PLEKHH2 (ENSSTOG00000001436) #11	DYNC2LI1 (ENSSTOG00000025473)	ABCG5 (ENSSTOG00000011170) #12	ABCG8 (ENSSTOG00000011177) #13	ENSSTOG00000011185	PPM1B (ENSSTOG00000004840) #17	SLC3A1 (ENSSTOG00000004848) #18	PREPL (ENSSTOG00000004860) #19	CAMKMT (ENSSTOG00000008349) #20	SIX3 (ENSSTOG00000028280) #22	SIX2 (ENSSTOG00000028289) #23	SRBD1 (ENSSTOG00000005898) #24	PRKCE (ENSSTOG00000012596) #25	EPAS1 (ENSSTOG00000012628) #26	TMEM247 (ENSSTOG00000001366) #27	RHOQ (ENSSTOG00000001369) #28	ENSSTOG00000001373 #29	CRIPT (ENSSTOG00000030474) ##30	SOCS5 (ENSSTOG00000004937) #31	MCFD2 (ENSSTOG00000003692) #34	TTC7A (ENSSTOG00000022551) #35	STPG4 (ENSSTOG00000016339) #36	CALM2 (ENSSTOG00000021814) #37	EPCAM (ENSSTOG00000008631)	MSH2 (ENSSTOG00000007110)
Laurasiatheria	ANCESTRAL SPECIES	13	ENSGT00940000157675 #11	ENSGT00940000155339	ENSGT00550000074964.i.a	ENSGT00940000155145 #10	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00390000016775	ENSGT00910000148371	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00950000185367	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Laurasiatheria_a	ANCESTRAL SPECIES	17	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00390000016775	ENSGT00910000148371	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00950000185367	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Laurasiatheria_b	ANCESTRAL SPECIES	17	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00950000185367	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Carnivora	ANCESTRAL SPECIES	19	ENSGT00390000007636	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00920000150742	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Felidae	ANCESTRAL SPECIES	3	ENSGT00940000161318	ENSGT00390000007636	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c.a
Cat	MODERN SPECIES	2	FER1L5 (ENSFCAG00000018873)	KANSL3 (ENSFCAG00000002703)	OXER1 (ENSFCAG00000000273)	HAAO (ENSFCAG00000000276)	ZFP36L2 (ENSFCAG00000043567) #7	THADA (ENSFCAG00000013463) #9	PLEKHH2 (ENSFCAG00000013464) #11	DYNC2LI1 (ENSFCAG00000024777)	ABCG5 (ENSFCAG00000013466) #12	ABCG8 (ENSFCAG00000013467) #13	LRPPRC (ENSFCAG00000013468) #14	PPM1B (ENSFCAG00000031573) #17	SLC3A1 (ENSFCAG00000000611) #18	PREPL (ENSFCAG00000000612) #19	CAMKMT (ENSFCAG00000010753) #20	SIX3 (ENSFCAG00000035168) #22	SIX2 (ENSFCAG00000029823) #23	SRBD1 (ENSFCAG00000005101) #24	PRKCE (ENSFCAG00000005102) #25	EPAS1 (ENSFCAG00000013629) #26	TMEM247 (ENSFCAG00000005136) #27	ATP6V1E2 (ENSFCAG00000011593)	RHOQ (ENSFCAG00000033287) #28	PIGF (ENSFCAG00000015609) #29	CRIPT (ENSFCAG00000015610) #30	SOCS5 (ENSFCAG00000000215) #31	ENSFCAG00000034741 #34	TTC7A (ENSFCAG00000004961) #35	STPG4 (ENSFCAG00000006968) #36	CALM2 (ENSFCAG00000029141) #37	EPCAM (ENSFCAG00000013445)
Panthera	ANCESTRAL SPECIES	2	ENSGT00940000161318	ENSGT00390000007636	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c.a
Tiger	MODERN SPECIES	576	CNNM4 (ENSPTIG00000010770)	LMAN2L (ENSPTIG00000011309)	FER1L5 (ENSPTIG00000011969)	KANSL3 (ENSPTIG00000014222)	HAAO (ENSPTIG00000014538)	THADA (ENSPTIG00000014909) #9	PLEKHH2 (ENSPTIG00000018011) #11	DYNC2LI1 (ENSPTIG00000019159)	ABCG5 (ENSPTIG00000020165) #12	ABCG8 (ENSPTIG00000020720) #13	ENSPTIG00000000933	PPM1B (ENSPTIG00000007406) #17	SLC3A1 (ENSPTIG00000008283) #18	PREPL (ENSPTIG00000010018) #19	CAMKMT (ENSPTIG00000011805) #20	SIX3 (ENSPTIG00000012265) #22	SIX2 (ENSPTIG00000012284) #23	SRBD1 (ENSPTIG00000012495) #24	PRKCE (ENSPTIG00000012898) #25	EPAS1 (ENSPTIG00000014115) #26	TMEM247 (ENSPTIG00000014708) #27	ATP6V1E2 (ENSPTIG00000006010)
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00940000161318	ENSGT00390000007636	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c.a
lion	MODERN SPECIES	3	FER1L5 (ENSPLOG00000010610)	KANSL3 (ENSPLOG00000010518)	OXER1 (ENSPLOG00000010488)	HAAO (ENSPLOG00000010463)	ZFP36L2 (ENSPLOG00000010448) #7	THADA (ENSPLOG00000010395) #9	PLEKHH2 (ENSPLOG00000010265) #11	DYNC2LI1 (ENSPLOG00000010200)	ABCG5 (ENSPLOG00000010133) #12	ABCG8 (ENSPLOG00000010079) #13	LRPPRC (ENSPLOG00000010038) #14	PPM1B (ENSPLOG00000009993) #17	SLC3A1 (ENSPLOG00000009782) #18	PREPL (ENSPLOG00000009693) #19	CAMKMT (ENSPLOG00000004268) #20	SIX3 (ENSPLOG00000004259) #22	SIX2 (ENSPLOG00000004252) #23	SRBD1 (ENSPLOG00000004237) #24	PRKCE (ENSPLOG00000004217) #25	EPAS1 (ENSPLOG00000004209) #26	TMEM247 (ENSPLOG00000004197) #27	ATP6V1E2 (ENSPLOG00000004195)	RHOQ (ENSPLOG00000004185) #28	PIGF (ENSPLOG00000004180) #29	ENSPLOG00000004163 #30	SOCS5 (ENSPLOG00000004156) #31	ENSPLOG00000004135 #34	TTC7A (ENSPLOG00000004103) #35	STPG4 (ENSPLOG00000004056) #36	EPCAM (ENSPLOG00000004026)	MSH2 (ENSPLOG00000004013)
leopard	MODERN SPECIES		LMAN2L (ENSPPRG00000015467)	FER1L5 (ENSPPRG00000014313)	KANSL3 (ENSPPRG00000013110)	HAAO (ENSPPRG00000012776)	ZFP36L2 (ENSPPRG00000012511) #7	THADA (ENSPPRG00000012427) #9	PLEKHH2 (ENSPPRG00000010321) #11	DYNC2LI1 (ENSPPRG00000008671)	ABCG5 (ENSPPRG00000007416) #12	ABCG8 (ENSPPRG00000007063) #13	LRPPRC (ENSPPRG00000006578) #14	PPM1B (ENSPPRG00000005947) #17	SLC3A1 (ENSPPRG00000005487) #18	PREPL (ENSPPRG00000004714) #19	CAMKMT (ENSPPRG00000003744) #20	SIX3 (ENSPPRG00000003590) #22	SIX2 (ENSPPRG00000003512) #23	SRBD1 (ENSPPRG00000003449) #24	PRKCE (ENSPPRG00000002857) #25	EPAS1 (ENSPPRG00000002429) #26	TMEM247 (ENSPPRG00000002045) #27	ATP6V1E2 (ENSPPRG00000021172)	RHOQ (ENSPPRG00000001907) #28	PIGF (ENSPPRG00000001807) #29	CRIPT (ENSPPRG00000001642) #30	SOCS5 (ENSPPRG00000021153) #31	ENSPPRG00000001506 #34	TTC7A (ENSPPRG00000000686) #35	STPG4 (ENSPPRG00000000369) #36	CALM2 (ENSPPRG00000000159) #37	ENSPPRG00000022685
Caniformia	ANCESTRAL SPECIES	18	ENSGT00390000007636	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00920000150742	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Caniformia_b	ANCESTRAL SPECIES	11	ENSGT00940000161318	ENSGT00390000007636	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Ursidae	ANCESTRAL SPECIES	9	ENSGT00940000161318	ENSGT00390000007636	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Ursus	ANCESTRAL SPECIES	373																ENSGT00940000160346.B #22	ENSGT00940000158292.a #23
American black bear	MODERN SPECIES	2886																SIX3 (ENSUAMG00000020689) #22	SIX2 (ENSUAMG00000020690) #23
Giant Panda	MODERN SPECIES	14	FER1L5 (ENSAMEG00000005459)	ENSAMEG00000005519	ENSAMEG00000019285	ENSAMEG00000005581	ZFP36L2 (ENSAMEG00000024495) #7	ENSAMEG00000005628 #9	PLEKHH2 (ENSAMEG00000005683) #11	DYNC2LI1 (ENSAMEG00000005751)	ABCG5 (ENSAMEG00000005769) #12	ABCG8 (ENSAMEG00000005811) #13	LRPPRC (ENSAMEG00000005852) #14	PPM1B (ENSAMEG00000005869) #17	SLC3A1 (ENSAMEG00000005889) #18	PREPL (ENSAMEG00000005918) #19	CAMKMT (ENSAMEG00000005966) #20	SIX3 (ENSAMEG00000028787) #22	SIX2 (ENSAMEG00000026315) #23	SRBD1 (ENSAMEG00000005993) #24	PRKCE (ENSAMEG00000006013) #25	EPAS1 (ENSAMEG00000006020) #26	TMEM247 (ENSAMEG00000006079) #27	ATP6V1E2 (ENSAMEG00000019292)	ENSAMEG00000006082 #28	PIGF (ENSAMEG00000006094) #29	ENSAMEG00000027374 #30	SOCS5 (ENSAMEG00000028144) #31	ENSAMEG00000006097 #34	TTC7A (ENSAMEG00000006106) #35	STPG4 (ENSAMEG00000006199) #36	CALM2 (ENSAMEG00000026131) #37	ENSAMEG00000006223
Mustelinae	ANCESTRAL SPECIES	86	ENSGT00390000007636	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000016775	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
American mink	MODERN SPECIES	146	KANSL3 (ENSNVIG00000015914)	OXER1 (ENSNVIG00000015977)	HAAO (ENSNVIG00000015988)	ZFP36L2 (ENSNVIG00000016061) #7	THADA (ENSNVIG00000016081) #9	PLEKHH2 (ENSNVIG00000016205) #11	DYNC2LI1 (ENSNVIG00000016292)	ABCG5 (ENSNVIG00000016408) #12	ABCG8 (ENSNVIG00000016453) #13	LRPPRC (ENSNVIG00000016516) #14	ENSNVIG00000016641	PPM1B (ENSNVIG00000016645) #17	SLC3A1 (ENSNVIG00000016665) #18	PREPL (ENSNVIG00000016795) #19	CAMKMT (ENSNVIG00000017006) #20	SIX3 (ENSNVIG00000017078) #22	SIX2 (ENSNVIG00000017096) #23	SRBD1 (ENSNVIG00000017107) #24	KPCE (ENSNVIG00000017149) #25	EPAS1 (ENSNVIG00000017189) #26	TMEM247 (ENSNVIG00000017202) #27	ATP6V1E2 (ENSNVIG00000017222)	RHOQ (ENSNVIG00000017224) #28	PIGF (ENSNVIG00000017235) #29	CRIPT (ENSNVIG00000017265) #30	SOCS5 (ENSNVIG00000017294) #31	MCFD2 (ENSNVIG00000017307) #34	TTC7A (ENSNVIG00000017339) #35	STPG4 (ENSNVIG00000017389) #36	CALM2 (ENSNVIG00000017405) #37
Ferret	MODERN SPECIES	199	HAAO (ENSMPUG00000011524)	ZFP36L2 (ENSMPUG00000011587) #7	ENSMPUG00000011588	THADA (ENSMPUG00000011590) #9	ENSMPUG00000011603	PLEKHH2 (ENSMPUG00000011605) #11	ENSMPUG00000011728	ABCG5 (ENSMPUG00000011776) #12	ABCG8 (ENSMPUG00000011787) #13	ENSMPUG00000011800	ENSMPUG00000011959	PPM1B (ENSMPUG00000011961) #17	SLC3A1 (ENSMPUG00000011966) #18	PREPL (ENSMPUG00000011971) #19	CAMKMT (ENSMPUG00000011984) #20	SIX3 (ENSMPUG00000011994) #22	ENSMPUG00000012001	SIX2 (ENSMPUG00000012005) #23	SRBD1 (ENSMPUG00000012007) #24	PRKCE (ENSMPUG00000012014) #25	EPAS1 (ENSMPUG00000012019) #26	TMEM247 (ENSMPUG00000012023) #27	ATP6V1E2 (ENSMPUG00000019926)	RHOQ (ENSMPUG00000012029) #28	PIGF (ENSMPUG00000012037) #29	SOCS5 (ENSMPUG00000019927) #31	MCFD2 (ENSMPUG00000012043) #34	TTC7A (ENSMPUG00000012045) #35	ENSMPUG00000012055 #36	CALM2 (ENSMPUG00000012061) #37	TXNDC9 (ENSMPUG00000012065)
Canidae	ANCESTRAL SPECIES	10	ENSGT00390000007636	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00920000150742	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Red fox	MODERN SPECIES	10	HAAO (ENSVVUG00000000254)	ZFP36L2 (ENSVVUG00000000298) #7	THADA (ENSVVUG00000000337) #9	ENSVVUG00000000436	PLEKHH2 (ENSVVUG00000000492) #11	DYNC2LI1 (ENSVVUG00000000552)	ABCG5 (ENSVVUG00000001031) #12	ABCG8 (ENSVVUG00000001551) #13	LRPPRC (ENSVVUG00000002339) #14	PPM1B (ENSVVUG00000005179) #17	SLC3A1 (ENSVVUG00000005184) #18	ENSVVUG00000005297	PREPL (ENSVVUG00000005300) #19	ENSVVUG00000005316 #20	CAMKMT (ENSVVUG00000005325) #20	SIX3 (ENSVVUG00000005365) #22	SIX2 (ENSVVUG00000005373) #23	SRBD1 (ENSVVUG00000005389) #24	PRKCE (ENSVVUG00000005443) #25	EPAS1 (ENSVVUG00000005473) #26	TMEM247 (ENSVVUG00000005515) #27	ATP6V1E2 (ENSVVUG00000005521)	RHOQ (ENSVVUG00000005523) #28	PIGF (ENSVVUG00000005539) #29	ENSVVUG00000005549 #30	SOCS5 (ENSVVUG00000005557) #31	MCFD2 (ENSVVUG00000005570) #34	TTC7A (ENSVVUG00000005602) #35	ENSVVUG00000005641 #36	MSH2 (ENSVVUG00000005653)	KCNK12 (ENSVVUG00000005655)
Canis_lupus	ANCESTRAL SPECIES	9	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000164207	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00920000150742	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Dingo	MODERN SPECIES	307	ZFP36L2 (ENSCAFG00020025413) #7	THADA (ENSCAFG00020025449) #9	ENSCAFG00020025562	PLEKHH2 (ENSCAFG00020025595) #11	DYNC2LI1 (ENSCAFG00020025762)	ABCG5 (ENSCAFG00020025768) #12	ABCG8 (ENSCAFG00020025785) #13	LRPPRC (ENSCAFG00020025995) #14	ENSCAFG00020026242	PPM1B (ENSCAFG00020026243) #17	ENSCAFG00020026246 #18	ENSCAFG00020026247	PREPL (ENSCAFG00020026249) #19	ENSCAFG00020026250 #20	CAMKMT (ENSCAFG00020026251) #20	SIX3 (ENSCAFG00020026262) #22	SIX2 (ENSCAFG00020026263) #23	SRBD1 (ENSCAFG00020026284) #24	ENSCAFG00020026372 #25	ENSCAFG00020026376 #25	EPAS1 (ENSCAFG00020026386) #26	TMEM247 (ENSCAFG00020026393) #27	ATP6V1E2 (ENSCAFG00020026395)	RHOQ (ENSCAFG00020026397) #28	PIGF (ENSCAFG00020026399) #29	CRIPT (ENSCAFG00020026401) #30	SOCS5 (ENSCAFG00020026406) #31	MCFD2 (ENSCAFG00020026408) #34	TTC7A (ENSCAFG00020026409) #35	STPG4 (ENSCAFG00020026410) #36	CALM2 (ENSCAFG00020026411) #37
Dog	MODERN SPECIES	1	KANSL3 (ENSCAFG00845024215)	ENSCAFG00845024990	ENSCAFG00845025017	ZFP36L2 (ENSCAFG00845025133) #7	THADA (ENSCAFG00845025205) #9	PLEKHH2 (ENSCAFG00845025497) #11	DYNC2LI1 (ENSCAFG00845025628)	ABCG5 (ENSCAFG00845025776) #12	ABCG8 (ENSCAFG00845025922) #13	LRPPRC (ENSCAFG00845026058) #14	ENSCAFG00845026378	PPM1B (ENSCAFG00845026428) #17	SLC3A1 (ENSCAFG00845026546) #18	PREPL (ENSCAFG00845026670) #19	CAMKMT (ENSCAFG00845026914) #20	SIX3 (ENSCAFG00845027028) #22	SIX2 (ENSCAFG00845027100) #23	SRBD1 (ENSCAFG00845027248) #24	PRKCE (ENSCAFG00845027571) #25	EPAS1 (ENSCAFG00845027702) #26	TMEM247 (ENSCAFG00845027828) #27	ATP6V1E2 (ENSCAFG00845027863)	RHOQ (ENSCAFG00845027887) #28	PIGF (ENSCAFG00845027939) #29	CRIPT (ENSCAFG00845028021) #30	SOCS5 (ENSCAFG00845028095) #31	ENSCAFG00845028228 #34	TTC7A (ENSCAFG00845028519) #35	CALM2 (ENSCAFG00845005229) #36	CALM2 (ENSCAFG00845005256) #37	EPCAM (ENSCAFG00845005300)
Laurasiatheria_c	ANCESTRAL SPECIES	14	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00950000185367	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Chiroptera	ANCESTRAL SPECIES	10	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.i.a.b ##30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Microchiroptera	ANCESTRAL SPECIES	14	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00920000150742	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.i.a.b ##30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Greater horseshoe bat	MODERN SPECIES	4	MTA3 (ENSRFEG00010007909)	OXER1 (ENSRFEG00010007880)	HAAO (ENSRFEG00010007769)	ZFP36L2 (ENSRFEG00010007723) #7	THADA (ENSRFEG00010007646) #9	PLEKHH2 (ENSRFEG00010007012) #11	DYNC2LI1 (ENSRFEG00010006832)	ABCG5 (ENSRFEG00010006732) #12	ABCG8 (ENSRFEG00010006591) #13	LRPPRC (ENSRFEG00010006509) #14	PPM1B (ENSRFEG00010006422) #17	ENSRFEG00010006373	SLC3A1 (ENSRFEG00010006303) #18	PREPL (ENSRFEG00010006202) #19	CAMKMT (ENSRFEG00010006109) #20	SIX3 (ENSRFEG00010006068) #22	SIX2 (ENSRFEG00010006045) #23	SRBD1 (ENSRFEG00010005992) #24	PRKCE (ENSRFEG00010005919) #25	EPAS1 (ENSRFEG00010005865) #26	ATP6V1E2 (ENSRFEG00010005825)	RHOQ (ENSRFEG00010005807) #28	PIGF (ENSRFEG00010005768) #29	ENSRFEG00010005727 ##30	SOCS5 (ENSRFEG00010005706) #31	ENSRFEG00010005683 #34	TTC7A (ENSRFEG00010005555) #35	STPG4 (ENSRFEG00010005468) #36	ENSRFEG00010005450	CALM2 (ENSRFEG00010005417) #37	EPCAM (ENSRFEG00010005391)
Equus	ANCESTRAL SPECIES	7	ENSGT00940000154815.a	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00950000185367	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Donkey	MODERN SPECIES	26	KCNG3 (ENSEASG00005031694)	MTA3 (ENSEASG00005005039)	HAAO (ENSEASG00005005029)	ZFP36L2 (ENSEASG00005030189) #7	ENSEASG00005005027 #7	THADA (ENSEASG00005005019) #9	PLEKHH2 (ENSEASG00005005000) #11	DYNC2LI1 (ENSEASG00005004994)	ABCG5 (ENSEASG00005004985) #12	ABCG8 (ENSEASG00005004971) #13	LRPPRC (ENSEASG00005003715) #14	PPM1B (ENSEASG00005003531) #17	SLC3A1 (ENSEASG00005003514) #18	PREPL (ENSEASG00005003382) #19	CAMKMT (ENSEASG00005003353) #20	SIX3 (ENSEASG00005003322) #22	SIX2 (ENSEASG00005003317) #23	SRBD1 (ENSEASG00005003132) #24	ENSEASG00005027046 #25	PRKCE (ENSEASG00005003080) #25	ENSEASG00005003078	EPAS1 (ENSEASG00005003062) #26	TMEM247 (ENSEASG00005003049) #27	ATP6V1E2 (ENSEASG00005003048)	ENSEASG00005033593 #28	PIGF (ENSEASG00005003043) #29	CRIPT (ENSEASG00005035430) #30	SOCS5 (ENSEASG00005033280) #31	ENSEASG00005003033 #34	TTC7A (ENSEASG00005003026) #35	STPG4 (ENSEASG00005003021) #36
Horse	MODERN SPECIES	6	COX7A2L (ENSECAG00000000584)	KCNG3 (ENSECAG00000004022)	MTA3 (ENSECAG00000023512)	HAAO (ENSECAG00000017940)	ZFP36L2 (ENSECAG00000017795) #7	THADA (ENSECAG00000020504) #9	PLEKHH2 (ENSECAG00000003331) #11	DYNC2LI1 (ENSECAG00000020566)	ABCG5 (ENSECAG00000010864) #12	ABCG8 (ENSECAG00000024537) #13	LRPPRC (ENSECAG00000023814) #14	PPM1B (ENSECAG00000016986) #17	SLC3A1 (ENSECAG00000018573) #18	PREPL (ENSECAG00000005377) #19	CAMKMT (ENSECAG00000018469) #20	SIX3 (ENSECAG00000038089) #22	SIX2 (ENSECAG00000017789) #23	SRBD1 (ENSECAG00000013865) #24	ENSECAG00000046348 #25	PRKCE (ENSECAG00000010557) #25	EPAS1 (ENSECAG00000014594) #26	TMEM247 (ENSECAG00000014097) #27	ATP6V1E2 (ENSECAG00000013717)	PIGF (ENSECAG00000012487) #29	RHOQ (ENSECAG00000033923) #28	SOCS5 (ENSECAG00000053838) #31	MCFD2 (ENSECAG00000000411) #34	TTC7A (ENSECAG00000018622) #35	ENSECAG00000020990	STPG4 (ENSECAG00000008396) #36	EPCAM (ENSECAG00000024630)
Artiodactyla	ANCESTRAL SPECIES	16	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00390000016775	ENSGT00910000148371	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00920000150742	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Suina	ANCESTRAL SPECIES	13	ENSGT00940000154815.a	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Pig	MODERN SPECIES	11	COX7A2L (ENSSSCG00000008466)	KCNG3 (ENSSSCG00000008465)	MTA3 (ENSSSCG00000008464)	HAAO (ENSSSCG00000038660)	ZFP36L2 (ENSSSCG00000038549) #7	ENSSSCG00000008459 #9	PLEKHH2 (ENSSSCG00000008456) #11	DYNC2LI1 (ENSSSCG00000038383)	ABCG5 (ENSSSCG00000035912) #12	ABCG8 (ENSSSCG00000008453) #13	LRPPRC (ENSSSCG00000008452) #14	PPM1B (ENSSSCG00000008451) #17	SLC3A1 (ENSSSCG00000008449) #18	PREPL (ENSSSCG00000008448) #19	CAMKMT (ENSSSCG00000008447) #20	SIX3 (ENSSSCG00000039283) #22	SIX2 (ENSSSCG00000008446) #23	ENSSSCG00000047564	SRBD1 (ENSSSCG00000008445) #24	PRKCE (ENSSSCG00000008444) #25	EPAS1 (ENSSSCG00000008443) #26	ATP6V1E2 (ENSSSCG00000008441)	RHOQ (ENSSSCG00000031261) #28	ENSSSCG00000045356	PIGF (ENSSSCG00000008440) #29	SOCS5 (ENSSSCG00000008437) #31	MCFD2 (ENSSSCG00000021325) #34	TTC7A (ENSSSCG00000008434) #35	ENSSSCG00000038396	STPG4 (ENSSSCG00000063378) #36	CALM2 (ENSSSCG00000008433) #37
Chacoan peccary	MODERN SPECIES	777	COX7A2L (ENSCWAG00000017508)	KCNG3 (ENSCWAG00000017526)	MTA3 (ENSCWAG00000017559)	HAAO (ENSCWAG00000017814)	ZFP36L2 (ENSCWAG00000017882) #7	THADA (ENSCWAG00000017952) #9	PLEKHH2 (ENSCWAG00000018268) #11	DYNC2LI1 (ENSCWAG00000018451)	ABCG5 (ENSCWAG00000018491) #12	ABCG8 (ENSCWAG00000018575) #13	LRPPRC (ENSCWAG00000018644) #14	PPM1B (ENSCWAG00000018774) #17	SLC3A1 (ENSCWAG00000018844) #18	PREPL (ENSCWAG00000019056) #19	CAMKMT (ENSCWAG00000019295) #20	SIX3 (ENSCWAG00000019346) #22	SIX2 (ENSCWAG00000019362) #23	SRBD1 (ENSCWAG00000019384) #24	PRKCE (ENSCWAG00000019484) #25	EPAS1 (ENSCWAG00000019576) #26	TMEM247 (ENSCWAG00000019607) #27	ATP6V1E2 (ENSCWAG00000019622)	RHOQ (ENSCWAG00000019635) #28	PIGF (ENSCWAG00000019656) #29	CRIPT (ENSCWAG00000019698) #30	SOCS5 (ENSCWAG00000019711) #31	ENSCWAG00000019718 #34	TTC7A (ENSCWAG00000019747) #35	STPG4 (ENSCWAG00000019847) #36	ENSCWAG00000003668 #37	EPCAM (ENSCWAG00000003750)
Artiodactyla_a	ANCESTRAL SPECIES	15	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00390000016775	ENSGT00910000148371	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00920000150742	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Camelidae	ANCESTRAL SPECIES	12	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00940000155145 #10	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00910000148371	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Arabian camel	MODERN SPECIES	6	ZFP36L2 (ENSCDRG00005021403) #7	THADA (ENSCDRG00005021497) #9	ENSCDRG00005021732	ENSCDRG00005021766	PLEKHH2 (ENSCDRG00005021813) #11	C1GALT1C1L (ENSCDRG00005021844) #10	DYNC2LI1 (ENSCDRG00005021851)	ABCG5 (ENSCDRG00005021876) #12	ABCG8 (ENSCDRG00005021896) #13	LRPPRC (ENSCDRG00005021914) #14	ENSCDRG00005021934	PPM1B (ENSCDRG00005021937) #17	SLC3A1 (ENSCDRG00005021956) #18	PREPL (ENSCDRG00005022007) #19	CAMKMT (ENSCDRG00005022120) #20	SIX3 (ENSCDRG00005022157) #22	SIX2 (ENSCDRG00005022173) #23	SRBD1 (ENSCDRG00005022191) #24	PRKCE (ENSCDRG00005022256) #25	EPAS1 (ENSCDRG00005022302) #26	TMEM247 (ENSCDRG00005022306) #27	ATP6V1E2 (ENSCDRG00005022308)	RHOQ (ENSCDRG00005022309) #28	PIGF (ENSCDRG00005022312) #29	CRIPT (ENSCDRG00005022315) #30	SOCS5 (ENSCDRG00005022317) #31	MCFD2 (ENSCDRG00005022318) #34	TTC7A (ENSCDRG00005022322) #35	STPG4 (ENSCDRG00005022325) #36	CALM2 (ENSCDRG00005022330) #37	EPCAM (ENSCDRG00005022333)
Artiodactyla_b	ANCESTRAL SPECIES	14	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00920000150742	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Cetacea	ANCESTRAL SPECIES	16	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000160407.g	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00940000153311.a.b.a.i.a	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT01060000249326	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36
Blue whale	MODERN SPECIES	4	HAAO (ENSBMSG00010012535)	ZFP36L2 (ENSBMSG00010012527) #7	ENSBMSG00010012519	ENSBMSG00010012479 #9	ENSBMSG00010012461	PLEKHH2 (ENSBMSG00010012431) #11	DYNC2LI1 (ENSBMSG00010012415)	ABCG5 (ENSBMSG00010012397) #12	ABCG8 (ENSBMSG00010012379) #13	LRPPRC (ENSBMSG00010012323) #14	PPM1B (ENSBMSG00010012266) #17	ENSBMSG00010012243	SLC3A1 (ENSBMSG00010012163) #18	PREPL (ENSBMSG00010012119) #19	CAMKMT (ENSBMSG00010012101) #20	SIX3 (ENSBMSG00010012090) #22	SIX2 (ENSBMSG00010012083) #23	ENSBMSG00010012072	SRBD1 (ENSBMSG00010012055) #24	PRKCE (ENSBMSG00010012019) #25	ENSBMSG00010012008	ENSBMSG00010011993 #26	TMEM247 (ENSBMSG00010011983) #27	ATP6V1E2 (ENSBMSG00010011978)	ENSBMSG00010011969 #28	PIGF (ENSBMSG00010011960) #29	CRIPT (ENSBMSG00010011952) #30	SOCS5 (ENSBMSG00010011946) #31	MCFD2 (ENSBMSG00010011931) #34	TTC7A (ENSBMSG00010011891) #35	STPG4 (ENSBMSG00010011867) #36
Odontoceti	ANCESTRAL SPECIES	15	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000160407.g	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00940000153311.a.b.a.i.a	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT01060000249326.a	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36
Sperm whale	MODERN SPECIES	3	ENSPCTG00005008206	ENSPCTG00005008352	ENSPCTG00005008371	HAAO (ENSPCTG00005008387)	THADA (ENSPCTG00005008437) #9	ENSPCTG00005008512	PLEKHH2 (ENSPCTG00005008567) #11	DYNC2LI1 (ENSPCTG00005008760)	ABCG5 (ENSPCTG00005008898) #12	ABCG8 (ENSPCTG00005009023) #13	LRPPRC (ENSPCTG00005009190) #14	PPM1B (ENSPCTG00005009655) #17	SLC3A1 (ENSPCTG00005009735) #18	PREPL (ENSPCTG00005010324) #19	CAMKMT (ENSPCTG00005010899) #20	SIX3 (ENSPCTG00005011047) #22	SIX2 (ENSPCTG00005011083) #23	ENSPCTG00005011114	SRBD1 (ENSPCTG00005011153) #24	ENSPCTG00005011396	ENSPCTG00005011448	ENSPCTG00005011534	ENSPCTG00005011576 #25	ENSPCTG00005011606 #25	EPAS1 (ENSPCTG00005011633) #26	TMEM247 (ENSPCTG00005011702) #27	ATP6V1E2 (ENSPCTG00005011740)	RHOQ (ENSPCTG00005011755) #28	PIGF (ENSPCTG00005011831) #29	CRIPT (ENSPCTG00005011891) #30	ENSPCTG00005011927 #31
Odontoceti_a	ANCESTRAL SPECIES	12	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000160407.g	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00940000153311.a.b.a.i.a	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT01060000249326.a	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36
Odontoceti_b	ANCESTRAL SPECIES	15	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT00940000160407.g	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00940000153311.a.b.a.i.a	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT01060000249326.a	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36
Vaquita	MODERN SPECIES	4	HAAO (ENSPSNG00000005557)	ZFP36L2 (ENSPSNG00000005603) #7	ENSPSNG00000005616	THADA (ENSPSNG00000005657) #9	ENSPSNG00000005718	PLEKHH2 (ENSPSNG00000005764) #11	DYNC2LI1 (ENSPSNG00000005899)	ABCG5 (ENSPSNG00000005948) #12	ABCG8 (ENSPSNG00000006013) #13	LRPPRC (ENSPSNG00000006086) #14	PPM1B (ENSPSNG00000006206) #17	SLC3A1 (ENSPSNG00000006294) #18	PREPL (ENSPSNG00000006532) #19	ENSPSNG00000006632	CAMKMT (ENSPSNG00000006666) #20	SIX3 (ENSPSNG00000006724) #22	SIX2 (ENSPSNG00000006741) #23	SRBD1 (ENSPSNG00000007161) #24	PRKCE (ENSPSNG00000008404) #25	EPAS1 (ENSPSNG00000008475) #26	TMEM247 (ENSPSNG00000008541) #27	ATP6V1E2 (ENSPSNG00000008582)	ENSPSNG00000008605 #28	PIGF (ENSPSNG00000008639) #29	CRIPT (ENSPSNG00000008658) #30	ENSPSNG00000008692 ##21	SOCS5 (ENSPSNG00000008716) #31	MCFD2 (ENSPSNG00000008747) #34	TTC7A (ENSPSNG00000008809) #35	STPG4 (ENSPSNG00000008945) #36	CALM2 (ENSPSNG00000009077) #37
Monodontidae	ANCESTRAL SPECIES	13	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00910000146759	ENSGT00390000015500 #9	ENSGT01000000221071	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00940000153311.a.b.a.i.a	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT01060000249326.a	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Narwhal	MODERN SPECIES	305	ZFP36L2 (ENSMMNG00015013927) #7	ENSMMNG00015013915	THADA (ENSMMNG00015013896) #9	ENSMMNG00015013872	PLEKHH2 (ENSMMNG00015013842) #11	DYNC2LI1 (ENSMMNG00015013820)	ABCG5 (ENSMMNG00015013802) #12	ABCG8 (ENSMMNG00015013773) #13	LRPPRC (ENSMMNG00015013723) #14	PPM1B (ENSMMNG00015013676) #17	ENSMMNG00015013655	SLC3A1 (ENSMMNG00015012224) #18	ENSMMNG00015012197	PREPL (ENSMMNG00015012168) #19	CAMKMT (ENSMMNG00015012124) #20	SIX3 (ENSMMNG00015012109) #22	SIX2 (ENSMMNG00015012101) #23	ENSMMNG00015012089	SRBD1 (ENSMMNG00015012057) #24	PRKCE (ENSMMNG00015012023) #25	ENSMMNG00015011999	EPAS1 (ENSMMNG00015011953) #26	TMEM247 (ENSMMNG00015011931) #27	ENSMMNG00015011892 #28	PIGF (ENSMMNG00015011874) #29	CRIPT (ENSMMNG00015011859) #30	SOCS5 (ENSMMNG00015011854) #31	MCFD2 (ENSMMNG00015011799) #34	TTC7A (ENSMMNG00015011753) #35	STPG4 (ENSMMNG00015011734) #36	CALM2 (ENSMMNG00015011714) #37
Beluga whale	MODERN SPECIES	37	ZFP36L2 (ENSDLEG00000004163) #7	ENSDLEG00000004158	THADA (ENSDLEG00000003967) #9	ENSDLEG00000003891	PLEKHH2 (ENSDLEG00000003742) #11	DYNC2LI1 (ENSDLEG00000003666)	ABCG5 (ENSDLEG00000003620) #12	ABCG8 (ENSDLEG00000003566) #13	LRPPRC (ENSDLEG00000001971) #14	PPM1B (ENSDLEG00000001628) #17	SLC3A1 (ENSDLEG00000001615) #18	ENSDLEG00000001604	PREPL (ENSDLEG00000001583) #19	ENSDLEG00000001572 #20	CAMKMT (ENSDLEG00000001566) #20	SIX3 (ENSDLEG00000001550) #22	SIX2 (ENSDLEG00000001538) #23	ENSDLEG00000001522	SRBD1 (ENSDLEG00000001500) #24	ENSDLEG00000001482	PRKCE (ENSDLEG00000001423) #25	EPAS1 (ENSDLEG00000001332) #26	TMEM247 (ENSDLEG00000001306) #27	ENSDLEG00000001298	ENSDLEG00000001287 #28	PIGF (ENSDLEG00000001279) #29	SOCS5 (ENSDLEG00000001265) #31	MCFD2 (ENSDLEG00000001257) #34	TTC7A (ENSDLEG00000001168) #35	STPG4 (ENSDLEG00000001137) #36	CALM1 (ENSDLEG00000001123) #37
Pecora	ANCESTRAL SPECIES	5	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00920000150742	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Yarkand deer	MODERN SPECIES	2	KCNG3 (ENSCHYG00000012480)	MTA3 (ENSCHYG00000012558)	OXER1 (ENSCHYG00000013109)	ENSCHYG00000013125	ENSCHYG00000013293 #7	THADA (ENSCHYG00000013343) #9	PLEKHH2 (ENSCHYG00000013581) #11	DYNC2LI1 (ENSCHYG00000013934)	ABCG5 (ENSCHYG00000014102) #12	ABCG8 (ENSCHYG00000014311) #13	LRPPRC (ENSCHYG00000014483) #14	PPM1B (ENSCHYG00000014681) #17	SLC3A1 (ENSCHYG00000014916) #18	PREPL (ENSCHYG00000015293) #19	CAMKMT (ENSCHYG00000016087) #20	SIX3 (ENSCHYG00000016303) #22	SIX2 (ENSCHYG00000016329) #23	ENSCHYG00000016374	SRBD1 (ENSCHYG00000016411) #24	ENSCHYG00000016815	PRKCE (ENSCHYG00000016844) #25	EPAS1 (ENSCHYG00000017145) #26	TMEM247 (ENSCHYG00000017250) #27	ATP6V1E2 (ENSCHYG00000017317)	RHOQ (ENSCHYG00000017342) #28	PIGF (ENSCHYG00000017391) #29	CRIPT (ENSCHYG00000017545) ##30	SOCS5 (ENSCHYG00000017601) #31	ENSCHYG00000017629 #34	TTC7A (ENSCHYG00000017758) #35	STPG4 (ENSCHYG00000018178) #36
Percora_a	ANCESTRAL SPECIES	13	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00920000150742	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B.s #34	ENSGT00940000154141.B.t #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Siberian musk deer	MODERN SPECIES	244	ENSMMSG00000012485	KCNG3 (ENSMMSG00000012461)	MTA3 (ENSMMSG00000012373)	HAAO (ENSMMSG00000012305)	ZFP36L2 (ENSMMSG00000012276) #7	THADA (ENSMMSG00000012194) #9	PLEKHH2 (ENSMMSG00000011744) #11	DYNC2LI1 (ENSMMSG00000011650)	ABCG5 (ENSMMSG00000011588) #12	ABCG8 (ENSMMSG00000011516) #13	LRPPRC (ENSMMSG00000011457) #14	ENSMMSG00000011413 #17	SLC3A1 (ENSMMSG00000011151) #18	PREPL (ENSMMSG00000010997) #19	CAMKMT (ENSMMSG00000010953) #20	SIX3 (ENSMMSG00000010938) #22	SIX2 (ENSMMSG00000010925) #23
Bovidae	ANCESTRAL SPECIES	5	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00920000150742	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B.s #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Caprinae	ANCESTRAL SPECIES	9	ENSGT01030000234573.B.c.b.a.l	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00920000150742	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.i.a.b ##30	ENSGT00940000159000 #31	ENSGT00940000154141.B.s #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Goat	MODERN SPECIES	2	MTA3 (ENSCHIG00000009339)	HAAO (ENSCHIG00000014147)	ZFP36L2 (ENSCHIG00000025020) #7	THADA (ENSCHIG00000010658) #9	PLEKHH2 (ENSCHIG00000016278) #11	DYNC2LI1 (ENSCHIG00000006689)	ABCG5 (ENSCHIG00000024311) #12	ABCG8 (ENSCHIG00000022042) #13	ENSCHIG00000020173	PPM1B (ENSCHIG00000022020) #17	SLC3A1 (ENSCHIG00000023728) #18	ENSCHIG00000010525	PREPL (ENSCHIG00000025131) #19	ENSCHIG00000018167 #20	CAMKMT (ENSCHIG00000020753) #20	SIX3 (ENSCHIG00000010414) #22	SIX2 (ENSCHIG00000010396) #23	SRBD1 (ENSCHIG00000016535) #24	ENSCHIG00000025999 #25	PRKCE (ENSCHIG00000018225) #25	EPAS1 (ENSCHIG00000016866) #26	TMEM247 (ENSCHIG00000024767) #27	ATP6V1E2 (ENSCHIG00000002972)	RHOQ (ENSCHIG00000002963) #28	PIGF (ENSCHIG00000015763) #29	ENSCHIG00000024753 ##30	SOCS5 (ENSCHIG00000002578) #31	MCFD2 (ENSCHIG00000021334) #34	TTC7A (ENSCHIG00000026586) #35	STPG4 (ENSCHIG00000010209) #36	CALM2 (ENSCHIG00000011230) #37
Rambouillet Sheep	MODERN SPECIES	19	ENSOARG00020008453	ENSOARG00020007979	OXER1 (ENSOARG00020007954)	HAAO (ENSOARG00020007901)	ZFP36L2 (ENSOARG00020007883) #7	THADA (ENSOARG00020007476) #9	PLEKHH2 (ENSOARG00020006919) #11	DYNC2LI1 (ENSOARG00020006791)	ABCG5 (ENSOARG00020006638) #12	ABCG8 (ENSOARG00020006412) #13	LRPPRC (ENSOARG00020006300) #14	PPM1B (ENSOARG00020006199) #17	SLC3A1 (ENSOARG00020006134) #18	PREPL (ENSOARG00020005995) #19	CAMKMT (ENSOARG00020005931) #20	SIX3 (ENSOARG00020005903) #22	SIX2 (ENSOARG00020005887) #23	ENSOARG00020005868	SRBD1 (ENSOARG00020005756) #24	PRKCE (ENSOARG00020005680) #25	EPAS1 (ENSOARG00020005535) #26	TMEM247 (ENSOARG00020005490) #27	ATP6V1E2 (ENSOARG00020005477)	PIGF (ENSOARG00020005433) #29	SOCS5 (ENSOARG00020005421) #31	ENSOARG00020005365 #34	TTC7A (ENSOARG00020005170) #35	STPG4 (ENSOARG00020005136) #36	CALM2 (ENSOARG00020005091) #37	EPCAM (ENSOARG00020005022)	MSH2 (ENSOARG00020004936)
Bovinae	ANCESTRAL SPECIES	4	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00960000190610	ENSGT00940000153311.a.b.a.j.b	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B.t.a #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36
American bison	MODERN SPECIES	3029															CAMKMT (ENSBBBG00000002076) #20	SIX3 (ENSBBBG00000011367) #22	SIX2 (ENSBBBG00000011363) #23	SRBD1 (ENSBBBG00000011355) #24	ENSBBBG00000011339	ENSBBBG00000011335	PRKCE (ENSBBBG00000011327) #25	EPAS1 (ENSBBBG00000002058) #26	TMEM247 (ENSBBBG00000011296) #27	ATP6V1E2 (ENSBBBG00000008438)	RHOQ (ENSBBBG00000008279) #28	PIGF (ENSBBBG00000011263) #29	CRIPT (ENSBBBG00000025506) #30	SOCS5 (ENSBBBG00000025463) #31	ENSBBBG00000006742 #34	TTC7A (ENSBBBG00000025356) #35	STPG4 (ENSBBBG00000025185) #36
Bos	ANCESTRAL SPECIES	5	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000018086.z.h.a.b.b	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00960000190610	ENSGT00940000153311.a.b.a.j.b	ENSGT00940000154711 #25	ENSGT01100000263480.a.b.a.b.b.a.a.b	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B.s.a.a #34	ENSGT00940000154141.B.t.a #34
Bos_a	ANCESTRAL SPECIES	6	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000018086.z.h.a.b.b	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00960000190610	ENSGT00940000153311.a.b.a.j.b	ENSGT00940000154711 #25	ENSGT01100000263480.a.b.a.b.b.a.a.b	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B.t.a #34	ENSGT00940000158638 #35
Domestic yak	MODERN SPECIES	28	ENSBGRG00000020920	ZFP36L2 (ENSBGRG00000020995) #7	ENSBGRG00000003581 #9	PLEKHH2 (ENSBGRG00000003752) #11	DYNC2LI1 (ENSBGRG00000004922)	ABCG5 (ENSBGRG00000005248) #12	ABCG8 (ENSBGRG00000005361) #13	LRPPRC (ENSBGRG00000005444) #14	ENSBGRG00000005528	ENSBGRG00000005538	PPM1B (ENSBGRG00000005560) #17	SLC3A1 (ENSBGRG00000005645) #18	PREPL (ENSBGRG00000006013) #19	ENSBGRG00000006351	CAMKMT (ENSBGRG00000006371) #20	SIX3 (ENSBGRG00000006480) #22	SIX2 (ENSBGRG00000006516) #23	SRBD1 (ENSBGRG00000006559) #24	ENSBGRG00000006579	ENSBGRG00000006597	ENSBGRG00000006602 #25	PRKCE (ENSBGRG00000006634) #25	ENSBGRG00000006802	EPAS1 (ENSBGRG00000006847) #26	TMEM247 (ENSBGRG00000007384) #27	ATP6V1E2 (ENSBGRG00000007445)	RHOQ (ENSBGRG00000007471) #28	PIGF (ENSBGRG00000007547) #29	CRIPT (ENSBGRG00000007691) #30	SOCS5 (ENSBGRG00000007750) #31	ENSBGRG00000007776
Wild yak	MODERN SPECIES	1514																SIX3 (ENSBMUG00000006308) #22	SIX2 (ENSBMUG00000006302) #23
Bos_b	ANCESTRAL SPECIES	9	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000018086.z.h.a.b.b	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00960000190610	ENSGT00940000153311.a.b.a.j.b	ENSGT00940000154711 #25	ENSGT01100000263480.a.b.a.b.b.a.a.b	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00390000002730.c.b	ENSGT00940000155970.q #28	ENSGT00390000016617 #29	ENSGT00950000183100.C.j #30	ENSGT00940000159000 #31	ENSGT00940000154141.B.s.a.a #34	ENSGT00940000154141.B.t.a #34
Cow	MODERN SPECIES	2	HAAO (ENSBTAG00000004674)	ZFP36L2 (ENSBTAG00000003553) #7	THADA (ENSBTAG00000003555) #9	PLEKHH2 (ENSBTAG00000032521) #11	DYNC2LI1 (ENSBTAG00000013676)	ABCG5 (ENSBTAG00000016365) #12	ABCG8 (ENSBTAG00000016366) #13	LRPPRC (ENSBTAG00000016368) #14	ENSBTAG00000054517	ENSBTAG00000016794	PPM1B (ENSBTAG00000000223) #17	SLC3A1 (ENSBTAG00000017421) #18	PREPL (ENSBTAG00000017429) #19	ENSBTAG00000040564	CAMKMT (ENSBTAG00000032519) #20	SIX3 (ENSBTAG00000027017) #22	SIX2 (ENSBTAG00000004159) #23	SRBD1 (ENSBTAG00000007508) #24	ENSBTAG00000050857	ENSBTAG00000032651	ENSBTAG00000050580 #25	PRKCE (ENSBTAG00000020614) #25	EPAS1 (ENSBTAG00000003711) #26	TMEM247 (ENSBTAG00000004105) #27	ATP6V1E2 (ENSBTAG00000013734)	RHOQ (ENSBTAG00000013749) #28	PIGF (ENSBTAG00000015719) #29	CRIPT (ENSBTAG00000015723) #30	SOCS5 (ENSBTAG00000008987) #31	MCFD2 (ENSBTAG00000003358) #34	TTC7A (ENSBTAG00000032558) #35
Hybrid Bos Indicus	MODERN SPECIES	2	KCNG3 (ENSBIXG00005023332)	MTA3 (ENSBIXG00005023270)	ENSBIXG00005023179	HAAO (ENSBIXG00005023168)	ZFP36L2 (ENSBIXG00005003937) #7	THADA (ENSBIXG00005023072) #9	PLEKHH2 (ENSBIXG00005022963) #11	DYNC2LI1 (ENSBIXG00005022758)	ABCG5 (ENSBIXG00005022716) #12	ABCG8 (ENSBIXG00005007691) #13	LRPPRC (ENSBIXG00005007378) #14	PPM1B (ENSBIXG00005022600) #17	SLC3A1 (ENSBIXG00005022554) #18	PREPL (ENSBIXG00005022460) #19	CAMKMT (ENSBIXG00005022237) #20	SIX3 (ENSBIXG00005003768) #22	SIX2 (ENSBIXG00005022129) #23	ENSBIXG00005003749	SRBD1 (ENSBIXG00005006888) #24	ENSBIXG00005022043	ENSBIXG00005022031	ENSBIXG00005022019	PRKCE (ENSBIXG00005021984) #25	ENSBIXG00005021886	EPAS1 (ENSBIXG00005021871) #26	TMEM247 (ENSBIXG00005021810) #27	RHOQ (ENSBIXG00005007308) #28	PIGF (ENSBIXG00005021758) #29	CRIPT (ENSBIXG00005021712) #30	SOCS5 (ENSBIXG00005021677) #31	ENSBIXG00005021629 #34
Marsupialia	ANCESTRAL SPECIES	17	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711.f #25	ENSGT00940000154711.e #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Opossum	MODERN SPECIES		ENSMODG00000000384	HAAO (ENSMODG00000000392)	ENSMODG00000000397	ENSMODG00000041919	ZFP36L2 (ENSMODG00000000407) #7	THADA (ENSMODG00000000451) #9	PLEKHH2 (ENSMODG00000000515) #11	ABCG5 (ENSMODG00000000561) #12	ABCG8 (ENSMODG00000000541) #13	LRPPRC (ENSMODG00000000648) #14	PPM1B (ENSMODG00000000678) #17	ENSMODG00000044072	SLC3A1 (ENSMODG00000000705) #18	ENSMODG00000000735 #19	CAMKMT (ENSMODG00000000747) #20	SIX3 (ENSMODG00000000753) #22	SIX2 (ENSMODG00000000761) #23	ENSMODG00000000814	SRBD1 (ENSMODG00000000822) #24	ENSMODG00000023103 #25	ENSMODG00000000928 #25	ENSMODG00000027407	ENSMODG00000044493	ENSMODG00000036747 #25	ENSMODG00000039002 #25	ENSMODG00000045158 #26	ENSMODG00000000953 #26	TMEM247 (ENSMODG00000050952) #27	RHOQ (ENSMODG00000000965) #28	CRIPT (ENSMODG00000000973) #30	PIGF (ENSMODG00000000968) #29
Marsupialia_b	ANCESTRAL SPECIES	19	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711.f #25	ENSGT00940000154711.e #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Diprotodontia	ANCESTRAL SPECIES	13	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711.f #25	ENSGT00940000154711.e #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Diprotodontia_a	ANCESTRAL SPECIES	14	ENSGT00940000166012.a.b	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711.f #25	ENSGT00940000154711.e #25	ENSGT00940000155930 #26	ENSGT00390000002879 #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b.ac #37	ENSGT00390000018245.c
Common wonbat	MODERN SPECIES	1017	ENSVURG00010000576	MTA3 (ENSVURG00010000545)	OXER1 (ENSVURG00010000521)	HAAO (ENSVURG00010000485)	ZFP36L2 (ENSVURG00010000386) #7	THADA (ENSVURG00010000329) #9	PLEKHH2 (ENSVURG00010000244) #11	DYNC2LI1 (ENSVURG00010000172)	ABCG5 (ENSVURG00010016687) #12	ABCG8 (ENSVURG00010016536) #13	LRPPRC (ENSVURG00010016482) #14	PPM1B (ENSVURG00010016462) #17	SLC3A1 (ENSVURG00010016439) #18	ENSVURG00010016423 #19	CAMKMT (ENSVURG00010016381) #20	SIX3 (ENSVURG00010016360) #22	ENSVURG00010016351	SIX2 (ENSVURG00010016333) #23	SRBD1 (ENSVURG00010016306) #24	ENSVURG00010016287 #25	ENSVURG00010015478 #25	EPAS1 (ENSVURG00010015420) #26	RHOQ (ENSVURG00010015409) #28	PIGF (ENSVURG00010015396) #29	CRIPT (ENSVURG00010015392) #30	SOCS5 (ENSVURG00010015381) #31	MCFD2 (ENSVURG00010015361) #34	TTC7A (ENSVURG00010015349) #35	STPG4 (ENSVURG00010015336) #36	ENSVURG00010015322 #37	EPCAM (ENSVURG00010015305)
koala	MODERN SPECIES	89	MTA3 (ENSPCIG00000002199)	OXER1 (ENSPCIG00000002152)	HAAO (ENSPCIG00000002132)	ZFP36L2 (ENSPCIG00000035472) #7	THADA (ENSPCIG00000006251) #9	PLEKHH2 (ENSPCIG00000006813) #11	DYNC2LI1 (ENSPCIG00000006835)	ABCG5 (ENSPCIG00000006846) #12	ABCG8 (ENSPCIG00000006869) #13	LRPPRC (ENSPCIG00000006872) #14	ENSPCIG00000006884	PPM1B (ENSPCIG00000006889) #17	SLC3A1 (ENSPCIG00000006891) #18	ENSPCIG00000006892 #19	CAMKMT (ENSPCIG00000009318) #20	SIX3 (ENSPCIG00000037272) #22	SIX2 (ENSPCIG00000006921) #23	SRBD1 (ENSPCIG00000025060) #24	ENSPCIG00000034995	ENSPCIG00000025059 #25	ENSPCIG00000037190 #25	EPAS1 (ENSPCIG00000014365) #26	ENSPCIG00000033994 #27	RHOQ (ENSPCIG00000017137) #28	PIGF (ENSPCIG00000017135) #29	CRIPT (ENSPCIG00000017132) #30	SOCS5 (ENSPCIG00000026010) #31	ENSPCIG00000002626	MCFD2 (ENSPCIG00000033308) #34	TTC7A (ENSPCIG00000026001) #35	STPG4 (ENSPCIG00000026006) #36
Wallaby	MODERN SPECIES	11487																SIX3 (ENSMEUG00000014494) #22
Tasmanian devil	MODERN SPECIES	1	COX7A2L (ENSSHAG00000022528)	MTA3 (ENSSHAG00000022168)	ENSSHAG00000022211	HAAO (ENSSHAG00000009256)	THADA (ENSSHAG00000029895) #9	PLEKHH2 (ENSSHAG00000018808) #11	DYNC2LI1 (ENSSHAG00000018793)	ABCG5 (ENSSHAG00000018785) #12	ABCG8 (ENSSHAG00000018768) #13	LRPPRC (ENSSHAG00000018725) #14	PPM1B (ENSSHAG00000025655) #17	SLC3A1 (ENSSHAG00000018458) #18	ENSSHAG00000028930	ENSSHAG00000018416 #19	CAMKMT (ENSSHAG00000024856) #20	SIX3 (ENSSHAG00000029380) #22	SIX2 (ENSSHAG00000021527) #23	SRBD1 (ENSSHAG00000015871) #24	ENSSHAG00000015686 #25	ENSSHAG00000023372 #25	EPAS1 (ENSSHAG00000012056) #26	ENSSHAG00000032230 #27	RHOQ (ENSSHAG00000010682) #28	PIGF (ENSSHAG00000010450) #29	SOCS5 (ENSSHAG00000029401) #31	CRIPT (ENSSHAG00000027319) #30	ENSSHAG00000027517 #34	TTC7A (ENSSHAG00000004355) #35	STPG4 (ENSSHAG00000001017) #36	ENSSHAG00000031926 #37	EPCAM (ENSSHAG00000027223)
Platypus	MODERN SPECIES	20	EML4 (ENSOANG00000010888)	ENSOANG00000038947	KCNG3 (ENSOANG00000003991)	MTA3 (ENSOANG00000004258)	ENSOANG00000048749	ZFP36L2 (ENSOANG00000046489) #7	ENSOANG00000014233 #9	ENSOANG00000005986	ABCG5 (ENSOANG00000002850) #12	ABCG8 (ENSOANG00000004114) #13	LRPPRC (ENSOANG00000014670) #14	PPM1B (ENSOANG00000006156) #17	SLC3A1 (ENSOANG00000029188) #18	ENSOANG00000043841 #19	CAMKMT (ENSOANG00000042799) #20	SIX3 (ENSOANG00000048536) #22	SIX2 (ENSOANG00000005315) #23	SRBD1 (ENSOANG00000042146) #24	PRKCE (ENSOANG00000042804) #25	ENSOANG00000015360 #26	RHOQ (ENSOANG00000020399) #28	PIGF (ENSOANG00000038758) #29	ENSOANG00000002821	ENSOANG00000036617 #34	TTC7A (ENSOANG00000002071) #35	ENSOANG00000040717 #36	CALM2 (ENSOANG00000001711) #37	ENSOANG00000009081	MSH2 (ENSOANG00000013431)	MSH6 (ENSOANG00000041939)	FBXO11 (ENSOANG00000009864)
Sauria	ANCESTRAL SPECIES	1	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879.a #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Archelosauria	ANCESTRAL SPECIES	1	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879.a #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Cryptodira	ANCESTRAL SPECIES	1	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879.a #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00990000205865	ENSGT00950000182980.a.b.b.b #37
Testudinoidea	ANCESTRAL SPECIES		ENSGT01030000234573.B.c.b.a.g	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879.a #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Emydidae	ANCESTRAL SPECIES	9	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00550000074698.h	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879.a #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
painted turtle	MODERN SPECIES	751	ZFP36L2 (ENSCPBG00000005249) #7	THADA (ENSCPBG00000005278) #9	PLEKHH2 (ENSCPBG00000005355) #11	DYNC2LI1 (ENSCPBG00000005392)	ABCG5 (ENSCPBG00000005404) #12	ABCG8 (ENSCPBG00000005417) #13	LRPPRC (ENSCPBG00000005446) #14	ENSCPBG00000005537	PPM1B (ENSCPBG00000005546) #17	PREPL (ENSCPBG00000005562) #19	SLC3A1 (ENSCPBG00000005581) #18	ENSCPBG00000005592	ENSCPBG00000005602 #20	ENSCPBG00000005609	CAMKMT (ENSCPBG00000005620) #20	SIX3 (ENSCPBG00000005650) #22	SIX2 (ENSCPBG00000005661) #23	SRBD1 (ENSCPBG00000005677) #24	PRKCE (ENSCPBG00000005705) #25	EPAS1 (ENSCPBG00000005750) #26	TMEM247 (ENSCPBG00000005784) #27	RHOQ (ENSCPBG00000005789) #28	PIGF (ENSCPBG00000005797) #29	CRIPT (ENSCPBG00000005800) #30	ENSCPBG00000005803	SOCS5 (ENSCPBG00000005806) #31
Three-toed box turtle	MODERN SPECIES	55	HAAO (ENSTMTG00000001680)	ZFP36L2 (ENSTMTG00000001699) #7	THADA (ENSTMTG00000001960) #9	PLEKHH2 (ENSTMTG00000002960) #11	DYNC2LI1 (ENSTMTG00000004436)	ABCG5 (ENSTMTG00000004474) #12	ABCG8 (ENSTMTG00000004608) #13	LRPPRC (ENSTMTG00000004758) #14	ENSTMTG00000004845	PPM1B (ENSTMTG00000004863) #17	SLC3A1 (ENSTMTG00000004886) #18	ENSTMTG00000004930	PREPL (ENSTMTG00000004945) #19	ENSTMTG00000004975 #20	CAMKMT (ENSTMTG00000005018) #20	SIX3 (ENSTMTG00000005050) #22	SIX2 (ENSTMTG00000005066) #23	SRBD1 (ENSTMTG00000005083) #24	PRKCE (ENSTMTG00000005128) #25	EPAS1 (ENSTMTG00000005168) #26	RHOQ (ENSTMTG00000005207) #28	PIGF (ENSTMTG00000005238) #29	CRIPT (ENSTMTG00000005259) #30	ENSTMTG00000005282	MCFD2 (ENSTMTG00000005324) #34	TTC7A (ENSTMTG00000005418) #35	STPG4 (ENSTMTG00000006570) #36	CALM2 (ENSTMTG00000006594) #37	EPCAM (ENSTMTG00000006606)	ENSTMTG00000005759	KCNK12 (ENSTMTG00000005769)
Testudinidae	ANCESTRAL SPECIES	6	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a.g	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879.b #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00390000018245.c
Goode s thornscrub tortoise	MODERN SPECIES	17	KCNG3 (ENSGEVG00005004007)	MTA3 (ENSGEVG00005004016)	ENSGEVG00005004028	HAAO (ENSGEVG00005004042)	ZFP36L2 (ENSGEVG00005004064) #7	THADA (ENSGEVG00005004713) #9	PLEKHH2 (ENSGEVG00005006432) #11	DYNC2LI1 (ENSGEVG00005006553)	ABCG5 (ENSGEVG00005006588) #12	ABCG8 (ENSGEVG00005006636) #13	LRPPRC (ENSGEVG00005006701) #14	PPM1B (ENSGEVG00005006805) #17	SLC3A1 (ENSGEVG00005006838) #18	PREPL (ENSGEVG00005006901) #19	CAMKMT (ENSGEVG00005006955) #20	SIX3 (ENSGEVG00005006973) #22	SIX2 (ENSGEVG00005006989) #23	SRBD1 (ENSGEVG00005007012) #24	PRKCE (ENSGEVG00005007055) #25	EPAS1 (ENSGEVG00005007174) #26	ENSGEVG00005007212 #27	RHOQ (ENSGEVG00005007235) #28	PIGF (ENSGEVG00005007257) #29	CRIPT (ENSGEVG00005007275) #30	ENSGEVG00005007307	MCFD2 (ENSGEVG00005007368) #34	TTC7A (ENSGEVG00005007402) #35	STPG4 (ENSGEVG00005000255) #36	CALM2 (ENSGEVG00005000282) #37	EPCAM (ENSGEVG00005000300)	MSH2 (ENSGEVG00005000351)
Abingdon island giant tortoise	MODERN SPECIES	29		ZFP36L2 (ENSCABG00000015704) #7	THADA (ENSCABG00000015697) #9	PLEKHH2 (ENSCABG00000015694) #11	DYNC2LI1 (ENSCABG00000015692)	ABCG5 (ENSCABG00000015685) #12	ABCG8 (ENSCABG00000015577) #13	LRPPRC (ENSCABG00000013291) #14	ENSCABG00000013237	PPM1B (ENSCABG00000013234) #17	ENSCABG00000013232	SLC3A1 (ENSCABG00000013222) #18	PREPL (ENSCABG00000013047) #19	ENSCABG00000013038 #20	CAMKMT (ENSCABG00000013032) #20	SIX3 (ENSCABG00000013025) #22	SIX2 (ENSCABG00000013018) #23	ENSCABG00000013003 #24
Chinese turtle	MODERN SPECIES	1230									ENSPSIG00000015672	PPM1B (ENSPSIG00000016106) #17	SLC3A1 (ENSPSIG00000006681) #18	PREPL (ENSPSIG00000007021) #19	ENSPSIG00000001787	CAMKMT (ENSPSIG00000007473) #20	ENSPSIG00000008149	SIX3 (ENSPSIG00000008212) #22	SIX2 (ENSPSIG00000008635) #23	SRBD1 (ENSPSIG00000008992) #24	PRKCE (ENSPSIG00000011478) #25	EPAS1 (ENSPSIG00000012658) #26	ENSPSIG00000014021	RHOQ (ENSPSIG00000014062) #28	PIGF (ENSPSIG00000014321) #29	CRIPT (ENSPSIG00000014392) #30	ENSPSIG00000014433	SOCS5 (ENSPSIG00000001791) #31	MCFD2 (ENSPSIG00000014785) #34	TTC7A (ENSPSIG00000014800) #35	ENSPSIG00000001793	ENSPSIG00000015376 #37	ENSPSIG00000015559
Archosauria	ANCESTRAL SPECIES	3	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879.a #27	ENSGT00390000002879.b #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Aves	ANCESTRAL SPECIES	12	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879.b #27	ENSGT00960000189498	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000154644	ENSGT00530000063883
African ostrich	MODERN SPECIES	658											PPM1B (ENSSCUG00000010708) #17	SLC3A1 (ENSSCUG00000010706) #18	PREPL (ENSSCUG00000010703) #19	ENSSCUG00000010699 #20	CAMKMT (ENSSCUG00000010693) #20	SIX3 (ENSSCUG00000010682) #22	SRBD1 (ENSSCUG00000010671) #24	PRKCE (ENSSCUG00000010666) #25	EPAS1 (ENSSCUG00000010664) #26	ENSSCUG00000010662 #27	PIGF (ENSSCUG00000010659) #29	CRIPT (ENSSCUG00000010656) #30	SOCS5 (ENSSCUG00000010655) #31	MCFD2 (ENSSCUG00000010651) #34	TTC7A (ENSSCUG00000010648) #35	ENSSCUG00000010646	ENSSCUG00000010644	PPP1CB (ENSSCUG00000010642)	ENSSCUG00000010639	FOSL2 (ENSSCUG00000010635)	BABAM2 (ENSSCUG00000010625)
Neognathae	ANCESTRAL SPECIES	2	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879.b #27	ENSGT00960000189498	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000154644	ENSGT00530000063883
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879.b #27	ENSGT00960000189498	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000154644	ENSGT00530000063883
Anatidae	ANCESTRAL SPECIES	11	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879.b #27	ENSGT00960000189498	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000154644	ENSGT00530000063883
Pink-footed goose	MODERN SPECIES	3	COX7A2L (ENSABRG00000011279)	KCNG3 (ENSABRG00000011273)	MTA3 (ENSABRG00000011237)	HAAO (ENSABRG00000011229)	ZFP36L2 (ENSABRG00000011174) #7	THADA (ENSABRG00000008282) #9	PLEKHH2 (ENSABRG00000006663) #11	DYNC2LI1 (ENSABRG00000006488)	ABCG5 (ENSABRG00000006465) #12	ABCG8 (ENSABRG00000005932) #13	LRPPRC (ENSABRG00000002580) #14	SLC3A1 (ENSABRG00000002289) #18	ENSABRG00000002269	PREPL (ENSABRG00000002237) #19	CAMKMT (ENSABRG00000002198) #20	SIX3 (ENSABRG00000002158) #22	SIX2 (ENSABRG00000002145) #23	SRBD1 (ENSABRG00000002126) #24	PRKCE (ENSABRG00000002068) #25	EPAS1 (ENSABRG00000001981) #26	ENSABRG00000001969 #27	ENSABRG00000001964	RHOQ (ENSABRG00000001959) #28	PIGF (ENSABRG00000001948) #29	ENSABRG00000001929	SOCS5 (ENSABRG00000001905) #31	MCFD2 (ENSABRG00000001847) #34	TTC7A (ENSABRG00000001836) #35	CALM2 (ENSABRG00000001266) #37	PPP1CB (ENSABRG00000001212)	PLB1 (ENSABRG00000001145)
Duck	MODERN SPECIES	21	MTA3 (ENSAPLG00000012098)	HAAO (ENSAPLG00000011743)	ZFP36L2 (ENSAPLG00000026380) #7	THADA (ENSAPLG00000010472) #9	PLEKHH2 (ENSAPLG00000010128) #11	DYNC2LI1 (ENSAPLG00000010005)	ABCG5 (ENSAPLG00000009909) #12	ABCG8 (ENSAPLG00000009721) #13	ENSAPLG00000008902 #14	ENSAPLG00000025387 #14	PPM1B (ENSAPLG00000008838) #17	SLC3A1 (ENSAPLG00000008564) #18	ENSAPLG00000019208	PREPL (ENSAPLG00000008267) #19	CAMKMT (ENSAPLG00000008229) #20	SIX3 (ENSAPLG00000016526) #22	SRBD1 (ENSAPLG00000006313) #24	PRKCE (ENSAPLG00000006475) #25	EPAS1 (ENSAPLG00000007160) #26	ENSAPLG00000001954 #27	ENSAPLG00000001956	RHOQ (ENSAPLG00000029905) #28	PIGF (ENSAPLG00000007535) #29	CRIPT (ENSAPLG00000029053) #30	SOCS5 (ENSAPLG00000001971) #31	MCFD2 (ENSAPLG00000023817) #34	TTC7A (ENSAPLG00000007643) #35	CALM2 (ENSAPLG00000030583) #37	PPP1CB (ENSAPLG00000008367)	ENSAPLG00000021973	FOSL2 (ENSAPLG00000009204)
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00960000189498	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000154644	ENSGT00530000063883	ENSGT00940000158876
Japanese quail	MODERN SPECIES	21	KCNG3 (ENSCJPG00005008619)	MTA3 (ENSCJPG00005008620)	HAAO (ENSCJPG00005008622)	THADA (ENSCJPG00005008671) #9	ZFP36L2 (ENSCJPG00005008745) #7	PLEKHH2 (ENSCJPG00005008752) #11	DYNC2LI1 (ENSCJPG00005010002)	ABCG5 (ENSCJPG00005010003) #12	ABCG8 (ENSCJPG00005010029) #13	LRPPRC (ENSCJPG00005010045) #14	PPM1B (ENSCJPG00005010137) #17	SLC3A1 (ENSCJPG00005010138) #18	ENSCJPG00005010139	PREPL (ENSCJPG00005010140) #19	CAMKMT (ENSCJPG00005010141) #20	SIX3 (ENSCJPG00005010147) #22	SIX2 (ENSCJPG00005010149) #23	SRBD1 (ENSCJPG00005010155) #24	PRKCE (ENSCJPG00005010156) #25	EPAS1 (ENSCJPG00005010157) #26	ENSCJPG00005010159	RHOQ (ENSCJPG00005010160) #28	PIGF (ENSCJPG00005010161) #29	CRIPT (ENSCJPG00005010162) #30	SOCS5 (ENSCJPG00005010163) #31	MCFD2 (ENSCJPG00005010165) #34	TTC7A (ENSCJPG00005010166) #35	CALM2 (ENSCJPG00005010167) #37	PPP1CB (ENSCJPG00005010181)	PLB1 (ENSCJPG00005010182)	FOSL2 (ENSCJPG00005010184)
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000154644	ENSGT00530000063883	ENSGT00940000158876	ENSGT00390000004208	ENSGT00390000005743
Chicken	MODERN SPECIES	22	KCNG3 (ENSGALG00010020177)	MTA3 (ENSGALG00010020272)	HAAO (ENSGALG00010020302)	ZFP36L2 (ENSGALG00010020304) #7	THADA (ENSGALG00010020314) #9	PLEKHH2 (ENSGALG00010020324) #11	DYNC2LI1 (ENSGALG00010020341)	ABCG5 (ENSGALG00010020352) #12	ABCG8 (ENSGALG00010020360) #13	LRPPRC (ENSGALG00010020375) #14	PPM1B (ENSGALG00010020386) #17	SLC3A1 (ENSGALG00010020402) #18	PREPL (ENSGALG00010020443) #19	ENSGALG00010020468	CAMKMT (ENSGALG00010020514) #20	SIX3 (ENSGALG00010020532) #22	ENSGALG00010018783	SRBD1 (ENSGALG00010018379) #24	PRKCE (ENSGALG00010018393) #25	EPAS1 (ENSGALG00010018414) #26	RHOQ (ENSGALG00010018420) #28	PIGF (ENSGALG00010018427) #29	CRIPT (ENSGALG00010018441) #30	SOCS5 (ENSGALG00010018511) #31	TTC7A (ENSGALG00010019855) #35	MCFD2 (ENSGALG00010019878) #34	CALM2 (ENSGALG00010019921) #37	PPP1CB (ENSGALG00010019972)	PLB1 (ENSGALG00010020006)	FOSL2 (ENSGALG00010020023)	BRE (ENSGALG00010021648)
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000154644	ENSGT00530000063883	ENSGT00940000158876	ENSGT00390000004208
Neognathae_c	ANCESTRAL SPECIES	5	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00950000182980.a.b.b.b.d #37	ENSGT00940000154644	ENSGT00530000063883	ENSGT00940000158876	ENSGT00390000004208
Golden eagle	MODERN SPECIES	4	MTA3 (ENSACCG00020009345)	HAAO (ENSACCG00020009386)	ZFP36L2 (ENSACCG00020009401) #7	THADA (ENSACCG00020009684) #9	PLEKHH2 (ENSACCG00020009906) #11	DYNC2LI1 (ENSACCG00020009976)	ABCG5 (ENSACCG00020009993) #12	ABCG8 (ENSACCG00020010005) #13	LRPPRC (ENSACCG00020010050) #14	PPM1B (ENSACCG00020010099) #17	ENSACCG00020010113 #18	ENSACCG00020010125 #18	ENSACCG00020010138	PREPL (ENSACCG00020010157) #19	CAMKMT (ENSACCG00020010176) #20	SIX3 (ENSACCG00020010184) #22	SIX2 (ENSACCG00020010194) #23	SRBD1 (ENSACCG00020010207) #24	PRKCE (ENSACCG00020010231) #25	EPAS1 (ENSACCG00020010251) #26	RHOQ (ENSACCG00020010292) #28	PIGF (ENSACCG00020010316) #29	CRIPT (ENSACCG00020010328) #30	ENSACCG00020010334	SOCS5 (ENSACCG00020010343) #31	MCFD2 (ENSACCG00020010349) #34	TTC7A (ENSACCG00020010401) #35	CALM2 (ENSACCG00020010438) #37	PPP1CB (ENSACCG00020010452)	ENSACCG00020010462	FOSL2 (ENSACCG00020010473)
Kakapo	MODERN SPECIES	2	PTK7 (ENSSHBG00005014411)	SRF (ENSSHBG00005014402)	ENSSHBG00005014362	ENSSHBG00005014307 #9	PLEKHH2 (ENSSHBG00005014222) #11	DYNC2LI1 (ENSSHBG00005014185)	ABCG5 (ENSSHBG00005014137) #12	ABCG8 (ENSSHBG00005014101) #13	LRPPRC (ENSSHBG00005014079) #14	PPM1B (ENSSHBG00005014066) #17	SLC3A1 (ENSSHBG00005014041) #18	ENSSHBG00005014028	PREPL (ENSSHBG00005014015) #19	ENSSHBG00005014006	CAMKMT (ENSSHBG00005014000) #20	SIX3 (ENSSHBG00005013994) #22	SIX2 (ENSSHBG00005013983) #23	SRBD1 (ENSSHBG00005011167) #24	PRKCE (ENSSHBG00005010866) #25	EPAS1 (ENSSHBG00005010795) #26	RHOQ (ENSSHBG00005010722) #28	PIGF (ENSSHBG00005010681) #29	CRIPT (ENSSHBG00005010643) #30	SOCS5 (ENSSHBG00005010607) #31	MCFD2 (ENSSHBG00005010588) #34	TTC7A (ENSSHBG00005010553) #35	ENSSHBG00005010517 #37	CALM2 (ENSSHBG00005010491) #37	PPP1CB (ENSSHBG00005010459)	FOSL2 (ENSSHBG00005000623)	BABAM2 (ENSSHBG00005000621)
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00940000154815.a	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000154644	ENSGT00530000063883	ENSGT00940000158876	ENSGT00390000004208
Great tit	MODERN SPECIES	22	COX7A2L (ENSPMJG00000013696)	KCNG3 (ENSPMJG00000013698)	MTA3 (ENSPMJG00000013699)	HAAO (ENSPMJG00000013712)	ZFP36L2 (ENSPMJG00000013742) #7	THADA (ENSPMJG00000013743) #9	PLEKHH2 (ENSPMJG00000013788) #11	DYNC2LI1 (ENSPMJG00000013797)	ABCG5 (ENSPMJG00000013799) #12	ABCG8 (ENSPMJG00000013801) #13	LRPPRC (ENSPMJG00000013802) #14	PPM1B (ENSPMJG00000014565) #17	SLC3A1 (ENSPMJG00000014566) #18	PREPL (ENSPMJG00000014567) #19	CAMKMT (ENSPMJG00000014568) #20	SIX3 (ENSPMJG00000014572) #22	SIX2 (ENSPMJG00000014573) #23	SRBD1 (ENSPMJG00000014578) #24	PRKCE (ENSPMJG00000014582) #25	EPAS1 (ENSPMJG00000014583) #26	RHOQ (ENSPMJG00000014584) #28	PIGF (ENSPMJG00000014585) #29	CRIPT (ENSPMJG00000014586) #30	SOCS5 (ENSPMJG00000014588) #31	LRFN2 (ENSPMJG00000014591)	SUPT7L (ENSPMJG00000014593)	SLC4A1AP (ENSPMJG00000014594)	ENSPMJG00000014595	ENSPMJG00000014596	ENSPMJG00000014599	RBKS (ENSPMJG00000014600)
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00940000154815.a	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000154644	ENSGT00530000063883	ENSGT00940000158876	ENSGT00390000004208
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00940000154815.a	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000154644	ENSGT00530000063883	ENSGT00940000158876	ENSGT00390000004208
Passeroidea	ANCESTRAL SPECIES		ENSGT00940000154815.a	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000154644	ENSGT00530000063883	ENSGT00940000158876	ENSGT00390000004208
Zebra finch	MODERN SPECIES	23	EML4 (ENSTGUG00000003388)	COX7A2L (ENSTGUG00000022808)	KCNG3 (ENSTGUG00000022548)	MTA3 (ENSTGUG00000003445)	HAAO (ENSTGUG00000003496)	ZFP36L2 (ENSTGUG00000021024) #7	THADA (ENSTGUG00000003517) #9	PLEKHH2 (ENSTGUG00000003612) #11	DYNC2LI1 (ENSTGUG00000003662)	ABCG5 (ENSTGUG00000003676) #12	ABCG8 (ENSTGUG00000003716) #13	LRPPRC (ENSTGUG00000003759) #14	SLC3A1 (ENSTGUG00000003806) #18	PREPL (ENSTGUG00000003832) #19	CAMKMT (ENSTGUG00000003843) #20	SIX3 (ENSTGUG00000003864) #22	SIX2 (ENSTGUG00000003867) #23	SRBD1 (ENSTGUG00000003878) #24	PRKCE (ENSTGUG00000003908) #25	EPAS1 (ENSTGUG00000003933) #26	PIGF (ENSTGUG00000028368) #29	CRIPT (ENSTGUG00000021464) #30	ENSTGUG00000024367	TP53BP2 (ENSTGUG00000003997)	FBXO28 (ENSTGUG00000004015)	DEGS1 (ENSTGUG00000021206)	NVL (ENSTGUG00000004033)	CNIH4 (ENSTGUG00000025113)	WDR26 (ENSTGUG00000004059)	CNIH3 (ENSTGUG00000004070)	LBR (ENSTGUG00000004083)
Common canary	MODERN SPECIES	1	EML4 (ENSSCAG00000009252)	COX7A2L (ENSSCAG00000009287)	KCNG3 (ENSSCAG00000009295)	MTA3 (ENSSCAG00000009329)	HAAO (ENSSCAG00000009336)	THADA (ENSSCAG00000009389) #9	PLEKHH2 (ENSSCAG00000009434) #11	DYNC2LI1 (ENSSCAG00000009604)	ABCG5 (ENSSCAG00000009631) #12	ABCG8 (ENSSCAG00000009643) #13	LRPPRC (ENSSCAG00000009839) #14	PPM1B (ENSSCAG00000010420) #17	SLC3A1 (ENSSCAG00000010427) #18	PREPL (ENSSCAG00000010431) #19	CAMKMT (ENSSCAG00000010436) #20	SIX3 (ENSSCAG00000010461) #22	SIX2 (ENSSCAG00000010473) #23	SRBD1 (ENSSCAG00000010496) #24	PRKCE (ENSSCAG00000010524) #25	EPAS1 (ENSSCAG00000010532) #26	RHOQ (ENSSCAG00000010541) #28	PIGF (ENSSCAG00000010547) #29	CRIPT (ENSSCAG00000010551) #30	SOCS5 (ENSSCAG00000010563) #31	MCFD2 (ENSSCAG00000010567) #34	TTC7A (ENSSCAG00000010574) #35	CALM2 (ENSSCAG00000010583) #37	PPP1CB (ENSSCAG00000010595)	ENSSCAG00000010630	FOSL2 (ENSSCAG00000010651)	BABAM2 (ENSSCAG00000010659)
Flycatcher	MODERN SPECIES	21	KIF6 (ENSFALG00000010931)	DAAM2 (ENSFALG00000010887)	MOCS1 (ENSFALG00000010858)	LRFN2 (ENSFALG00000010855)	SUPT7L (ENSFALG00000024859)	SLC4A1AP (ENSFALG00000010842)	ENSFALG00000010834	ENSFALG00000010832	ENSFALG00000024954	RBKS (ENSFALG00000010828)	BABAM2 (ENSFALG00000010815)	PPM1B (ENSFALG00000013013) #17	SLC3A1 (ENSFALG00000013003) #18	PREPL (ENSFALG00000012993) #19	CAMKMT (ENSFALG00000012988) #20	SIX3 (ENSFALG00000012979) #22	SIX2 (ENSFALG00000012971) #23	SRBD1 (ENSFALG00000012966) #24	PRKCE (ENSFALG00000012934) #25	EPAS1 (ENSFALG00000012916) #26	RHOQ (ENSFALG00000012893) #28	PIGF (ENSFALG00000012878) #29	CRIPT (ENSFALG00000027404) #30	SOCS5 (ENSFALG00000014436) #31	MCFD2 (ENSFALG00000012870) #34	TTC7A (ENSFALG00000012839) #35	CALM2 (ENSFALG00000022948) #37	PPP1CB (ENSFALG00000027831)	ENSFALG00000012774	FOSL2 (ENSFALG00000012753)	LRPPRC (ENSFALG00000012738) #14
Australian saltwater crocodile	MODERN SPECIES	60	ENSCPRG00005015537	MTA3 (ENSCPRG00005015534)	HAAO (ENSCPRG00005015522)	THADA (ENSCPRG00005015502) #9	PLEKHH2 (ENSCPRG00005015487) #11	DYNC2LI1 (ENSCPRG00005015459)	ABCG5 (ENSCPRG00005015448) #12	ABCG8 (ENSCPRG00005015433) #13	LRPPRC (ENSCPRG00005015407) #14	PPM1B (ENSCPRG00005015391) #17	ENSCPRG00005015389	SLC3A1 (ENSCPRG00005015386) #18	PREPL (ENSCPRG00005015374) #19	ENSCPRG00005015365 #20	ENSCPRG00005015354 #20	SIX3 (ENSCPRG00005015342) #22	SIX2 (ENSCPRG00005015339) #23	ENSCPRG00005015332	SRBD1 (ENSCPRG00005015290) #24	PRKCE (ENSCPRG00005015247) #25	EPAS1 (ENSCPRG00005015213) #26	ENSCPRG00005015201 #27	ENSCPRG00005015192 #27	RHOQ (ENSCPRG00005015179) #28	PIGF (ENSCPRG00005015177) #29	CRIPT (ENSCPRG00005015176) #30	ENSCPRG00005015165	SOCS5 (ENSCPRG00005015151) #31	MCFD2 (ENSCPRG00005015138) #34	TTC7A (ENSCPRG00005014677) #35	STPG4 (ENSCPRG00005014639) #36
Lepidosauria	ANCESTRAL SPECIES		ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00960000189319	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a.f #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879.a #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000154922.b
Episquamata	ANCESTRAL SPECIES		ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00960000189319	ENSGT00940000158103 #18	ENSGT01000000220262	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a.f #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879.b #27	ENSGT00390000002879.a #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Laterata	ANCESTRAL SPECIES	4	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00960000189319	ENSGT00940000158103 #18	ENSGT01000000220262	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a.f #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879.b #27	ENSGT00390000002879.a #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37
Argentine black and white tegu	MODERN SPECIES	7	ZFP36L2 (ENSSMRG00000018539) #7	THADA (ENSSMRG00000018534) #9	PLEKHH2 (ENSSMRG00000018529) #11	DYNC2LI1 (ENSSMRG00000018528)	ENSSMRG00000018527	ABCG5 (ENSSMRG00000018524) #12	ABCG8 (ENSSMRG00000018519) #13	LRPPRC (ENSSMRG00000018517) #14	PPM1B (ENSSMRG00000018516) #17	ENSSMRG00000018515	SLC3A1 (ENSSMRG00000018514) #18	PREPL (ENSSMRG00000018513) #19	ENSSMRG00000018512	CAMKMT (ENSSMRG00000018510) #20	ENSSMRG00000018508	SIX3 (ENSSMRG00000018503) #22	SIX2 (ENSSMRG00000018502) #23	SRBD1 (ENSSMRG00000018493) #24	ENSSMRG00000018489	PRKCE (ENSSMRG00000018487) #25	EPAS1 (ENSSMRG00000018484) #26	ENSSMRG00000018482 #27	ENSSMRG00000018481 #27	RHOQ (ENSSMRG00000018480) #28	PIGF (ENSSMRG00000018479) #29	CRIPT (ENSSMRG00000018478) #30	ENSSMRG00000018477	ENSSMRG00000018468	SOCS5 (ENSSMRG00000018467) #31	MCFD2 (ENSSMRG00000018462) #34	TTC7A (ENSSMRG00000018453) #35
Common wall lizard	MODERN SPECIES	11	ENSPMRG00000018677 ##21	ENSPMRG00000018686	ZFP36L2 (ENSPMRG00000018692) #7	THADA (ENSPMRG00000018815) #9	PLEKHH2 (ENSPMRG00000019508) #11	DYNC2LI1 (ENSPMRG00000019863)	ABCG5 (ENSPMRG00000019878) #12	ABCG8 (ENSPMRG00000019930) #13	LRPPRC (ENSPMRG00000020011) #14	ENSPMRG00000020492 ##21	PPM1B (ENSPMRG00000020500) #17	SLC3A1 (ENSPMRG00000020509) #18	ENSPMRG00000020513	PREPL (ENSPMRG00000020524) #19	CAMKMT (ENSPMRG00000020543) #20	SIX3 (ENSPMRG00000020550) #22	SIX2 (ENSPMRG00000020554) #23	SRBD1 (ENSPMRG00000020574) #24	ENSPMRG00000020627	PRKCE (ENSPMRG00000020640) #25	EPAS1 (ENSPMRG00000020671) #26	ENSPMRG00000020714 #27	ENSPMRG00000020718 #27	RHOQ (ENSPMRG00000020726) #28	PIGF (ENSPMRG00000020732) #29	CRIPT (ENSPMRG00000020738) #30	ENSPMRG00000020745	ENSPMRG00000020760	MCFD2 (ENSPMRG00000020762) #34	TTC7A (ENSPMRG00000020772) #35	STPG4 (ENSPMRG00000020798) #36
Toxicofera	ANCESTRAL SPECIES		ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT01000000220262	ENSGT00530000063426.a #19	ENSGT00390000002168.sb #20	ENSGT00940000178768	ENSGT00390000002168.rb #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a.f #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00390000002879.a.a #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000154922.b
Elapidae	ANCESTRAL SPECIES		ENSGT00940000158434	ENSGT00940000154815.a	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168.rb #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a.f #23	ENSGT00510000047850 #24	ENSGT00940000154711.tb.b #25	ENSGT00940000155930.a #26	ENSGT00390000002879.a.a #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000154922.b
Elapidae_a	ANCESTRAL SPECIES	2	ENSGT00940000158434	ENSGT00940000154815.a	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168.rb #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a.f #23	ENSGT00510000047850 #24	ENSGT00940000154711.tb.b #25	ENSGT00940000155930.a #26	ENSGT00390000002879.a.a #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000154922.b
Acanthophiinae	ANCESTRAL SPECIES	3	ENSGT00940000158434	ENSGT00940000154815.a	ENSGT00940000159658	ENSGT01030000234573.B.c.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168.rb #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a.f #23	ENSGT00510000047850 #24	ENSGT00940000154711.tb.b #25	ENSGT00940000155930.a #26	ENSGT00390000002879.a.a #27	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00390000008095 #36	ENSGT00950000182980.a.b.b.b #37	ENSGT00940000154922.b.m
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	486																ENSPTXG00000017549 #22
Eastern brown snake	MODERN SPECIES	485																ENSPTXG00000017548 #22
Mainland tiger snake	MODERN SPECIES	3	MTA3 (ENSNSUG00000014535)	HAAO (ENSNSUG00000014546)	ZFP36L2 (ENSNSUG00000014547) #7	THADA (ENSNSUG00000014549) #9	PLEKHH2 (ENSNSUG00000014560) #11	DYNC2LI1 (ENSNSUG00000014561)	LRPPRC (ENSNSUG00000014562) #14	ENSNSUG00000014563	ENSNSUG00000014565	PPM1B (ENSNSUG00000014566) #17	SLC3A1 (ENSNSUG00000014567) #18	ENSNSUG00000014568	PREPL (ENSNSUG00000014569) #19	ENSNSUG00000014570 #20	ENSNSUG00000014571 #20	SIX3 (ENSNSUG00000014573) #22	SIX2 (ENSNSUG00000014574) #23	SRBD1 (ENSNSUG00000014575) #24	ENSNSUG00000014615	PRKCE (ENSNSUG00000014616) #25	ENSNSUG00000014617	EPAS1 (ENSNSUG00000014622) #26	TMEM247 (ENSNSUG00000015236) #27	RHOQ (ENSNSUG00000015237) #28	PIGF (ENSNSUG00000015238) #29	CRIPT (ENSNSUG00000015239) #30	ENSNSUG00000015240	SOCS5 (ENSNSUG00000015241) #31	MCFD2 (ENSNSUG00000015242) #34	TTC7A (ENSNSUG00000015243) #35	STPG4 (ENSNSUG00000015244) #36
Indian cobra	MODERN SPECIES		PKDCC (ENSNNAG00000001328)	EML4 (ENSNNAG00000001275)	KCNG3 (ENSNNAG00000001242)	MTA3 (ENSNNAG00000001193)	HAAO (ENSNNAG00000001165)	ZFP36L2 (ENSNNAG00000001148) #7	THADA (ENSNNAG00000000947) #9	PLEKHH2 (ENSNNAG00000000831) #11	DYNC2LI1 (ENSNNAG00000000810)	LRPPRC (ENSNNAG00000000529) #14	PPM1B (ENSNNAG00000000402) #17	ENSNNAG00000000385	SLC3A1 (ENSNNAG00000000367) #18	PREPL (ENSNNAG00000000350) #19	CAMKMT (ENSNNAG00000000328) #20	SIX3 (ENSNNAG00000000311) #22	SIX2 (ENSNNAG00000000304) #23	SRBD1 (ENSNNAG00000002735) #24	ENSNNAG00000002726	PRKCE (ENSNNAG00000002707) #25	EPAS1 (ENSNNAG00000002633) #26	RHOQ (ENSNNAG00000002622) #28	PIGF (ENSNNAG00000002614) #29	CRIPT (ENSNNAG00000002612) #30	ENSNNAG00000002603	SOCS5 (ENSNNAG00000002599) #31	MCFD2 (ENSNNAG00000002592) #34	TTC7A (ENSNNAG00000002538) #35	CALM2 (ENSNNAG00000002517) #37	SLC22A7 (ENSNNAG00000002494)	TTBK1 (ENSNNAG00000002481)
Lizard	MODERN SPECIES	898													ENSACAG00000035503	ENSACAG00000043248	ENSACAG00000036646 #20	SIX3 (ENSACAG00000045499) #22	SIX2 (ENSACAG00000003799) #23	ENSACAG00000038243	SRBD1 (ENSACAG00000003837) #24	ENSACAG00000034955	ENSACAG00000043990	ENSACAG00000037385	PRKCE (ENSACAG00000003872) #25	EPAS1 (ENSACAG00000004034) #26	ENSACAG00000029659 #27	ENSACAG00000042638 #27	ENSACAG00000043065 #27
tuatara	MODERN SPECIES	320				PLEKHH2 (ENSSPUG00000004881) #11	DYNC2LI1 (ENSSPUG00000004950)	ABCG5 (ENSSPUG00000005041) #12	ABCG8 (ENSSPUG00000005117) #13	LRPPRC (ENSSPUG00000005188) #14	ENSSPUG00000005237	PPM1B (ENSSPUG00000005297) #17	ENSSPUG00000005310	SLC3A1 (ENSSPUG00000005320) #18	PREPL (ENSSPUG00000005376) #19	ENSSPUG00000005410 #20	ENSSPUG00000005429 #20	SIX3 (ENSSPUG00000005461) #22
Anura	ANCESTRAL SPECIES	111	ENSGT00940000159658	ENSGT00390000010899.b	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00960000189319	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000165391	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00940000167263	ENSGT00950000182980.a.b.b.b.cc #37
Leishan spiny toad	MODERN SPECIES	7	ZFP36L2 (ENSLLEG00000005100) #7	THADA (ENSLLEG00000005176) #9	PLEKHH2 (ENSLLEG00000005594) #11	DYNC2LI1 (ENSLLEG00000006063)	ABCG5 (ENSLLEG00000006291) #12	ABCG8 (ENSLLEG00000006535) #13	LRPPRC (ENSLLEG00000006826) #14	ENSLLEG00000007491	ENSLLEG00000007502	ENSLLEG00000007511	SLC3A1 (ENSLLEG00000007536) #18	PREPL (ENSLLEG00000007686) #19	ENSLLEG00000007738	CAMKMT (ENSLLEG00000007761) #20	ENSLLEG00000007801	SIX3 (ENSLLEG00000007815) #22	SIX2 (ENSLLEG00000007832) #23	ENSLLEG00000007859	SRBD1 (ENSLLEG00000007877) #24	PRKCE (ENSLLEG00000008100) #25	ENSLLEG00000008299	ENSLLEG00000008313	EPAS1 (ENSLLEG00000008398) #26	ENSLLEG00000009218	RHOQ (ENSLLEG00000009247) #28	PIGF (ENSLLEG00000009325) #29	CRIPT (ENSLLEG00000009471) #30	ENSLLEG00000009579	ENSLLEG00000009630	ENSLLEG00000009657	SOCS5 (ENSLLEG00000009670) #31
Frog	MODERN SPECIES	5	haao (ENSXETG00000046490)	ENSXETG00000044648	ENSXETG00000047043	ENSXETG00000043328	zfp36l2 (ENSXETG00000009274) #7	thada (ENSXETG00000009275) #9	plekhh2 (ENSXETG00000009282) #11	dync2li1 (ENSXETG00000036339)	abcg5 (ENSXETG00000009290) #12	lrpprc (ENSXETG00000009296) #14	ppm1b (ENSXETG00000002746) #17	slc3a1 (ENSXETG00000002750) #18	ENSXETG00000034675	prepl (ENSXETG00000002751) #19	camkmt (ENSXETG00000002754) #20	six3 (ENSXETG00000002758) #22	six2 (ENSXETG00000026158) #23	XB5903316 [provisional:slc66a1] (ENSXETG00000002760) #24	prkce (ENSXETG00000041283) #25	epas1 (ENSXETG00000026167) #26	rhoq (ENSXETG00000022733) #28	pigf (ENSXETG00000026168) #29	cript (ENSXETG00000022737) #30	ENSXETG00000022741	mcfd2 (ENSXETG00000022745) #34	socs5 (ENSXETG00000048009) #31	prop1 (ENSXETG00000036806)	ttc7a (ENSXETG00000022746) #35	stpg4 (ENSXETG00000036736)	calm2 (ENSXETG00000015713) #37	ENSXETG00000039390
Coelacanth	MODERN SPECIES	699																SIX3 (ENSLACG00000015041) #22	SIX2 (ENSLACG00000014007) #23	RPL28 (ENSLACG00000011783)	SRBD1 (ENSLACG00000009790) #24	ENSLACG00000008997 #25	ENSLACG00000001199
Actinopterygii	ANCESTRAL SPECIES	55	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b	ENSGT00940000159000 #31	ENSGT00940000165391	ENSGT00940000154141.B #34	ENSGT00990000212466	ENSGT00940000158638 #35	ENSGT00940000167263	ENSGT00950000182980.a.b.b.b #37
Reedfish	MODERN SPECIES	6	BICRAL (ENSECRG00000014286)	tbcc (ENSECRG00000014362)	prph2b (ENSECRG00000014399)	UBR2 (ENSECRG00000014490)	zfp36l2 (ENSECRG00000014569) #7	THADA (ENSECRG00000014622) #9	PLEKHH2 (ENSECRG00000014782) #11	dync2li1 (ENSECRG00000015502)	abcg5 (ENSECRG00000015546) #12	abcg8 (ENSECRG00000015600) #13	LRPPRC (ENSECRG00000015891) #14	ppm1ba (ENSECRG00000016959) #17	SLC3A1 (ENSECRG00000017022) #18	prepl (ENSECRG00000017112) #19	ENSECRG00000017176	six3a (ENSECRG00000017189) #22	six2a (ENSECRG00000017213) #23	SRBD1 (ENSECRG00000017244) #24	PRKCE (ENSECRG00000017293) #25	epas1b (ENSECRG00000017335) #26	rhoq (ENSECRG00000017378) #28	pigf (ENSECRG00000017397) #29	cript (ENSECRG00000017433) #30	ENSECRG00000017469	ENSECRG00000017487 ##37	ENSECRG00000017502	ENSECRG00000017522 ##37	ENSECRG00000017534	ENSECRG00000017550	ENSECRG00000014585	atl3 (ENSECRG00000014627)
Neopterygii	ANCESTRAL SPECIES	3	ENSGT00990000203619.A.b.b.b.a	ENSGT00390000010899.a.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b.a	ENSGT00940000159000 #31	ENSGT00940000165391	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00940000167263	ENSGT00950000182980.a.b.b.b #37	ENSGT00730000110943.B.c
Spotted gar	MODERN SPECIES	654	OXER1 (ENSLOCG00000016459)	ENSLOCG00000017364	ENSLOCG00000016452	haao (ENSLOCG00000016447)	ENSLOCG00000016446	THADA (ENSLOCG00000016430) #9	PLEKHH2 (ENSLOCG00000016422) #11	dync2li1 (ENSLOCG00000016417)	abcg5 (ENSLOCG00000016413) #12	abcg8 (ENSLOCG00000016405) #13	lrpprc (ENSLOCG00000016390)	ppm1ba (ENSLOCG00000016386) #17	SLC3A1 (ENSLOCG00000016381) #18	prepl (ENSLOCG00000016376) #19	CAMKMT (ENSLOCG00000016374) #20	six3a (ENSLOCG00000016373) #22	six2a (ENSLOCG00000016371) #23	SRBD1 (ENSLOCG00000016360) #24	PRKCE (ENSLOCG00000016351) #25	epas1b (ENSLOCG00000016337) #26	rhoq (ENSLOCG00000016335) #28	pigf (ENSLOCG00000016331) #29	cript (ENSLOCG00000016330) #30	gch2 (ENSLOCG00000016326)	SOCS5 (ENSLOCG00000017363) #31	ENSLOCG00000016325	mcfd2 (ENSLOCG00000016322) #34	TTC7A (ENSLOCG00000016316) #35	si:ch211-93n23.7 (ENSLOCG00000016315)	calm2a (ENSLOCG00000016313) #37	ENSLOCG00000016311
Osteoglossocephalai	ANCESTRAL SPECIES	31	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00390000010899.a.b.b.a	ENSGT00390000013008	ENSGT00940000161584 #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000159658.b.a	ENSGT00940000154815.b.a	ENSGT00940000154711 #25	ENSGT00940000155930 #26	ENSGT00940000155970 #28	ENSGT00390000016617 #29	ENSGT00950000183100.C #30	ENSGT00390000013481.c.b.a	ENSGT00940000164285.a	ENSGT00940000165391	ENSGT00550000074867	ENSGT00390000013481.c.b.b	ENSGT00940000154141.B #34
Osteoglossiformes	ANCESTRAL SPECIES	153	ENSGT00940000159658.b.a.c	ENSGT01030000234573.B.c.b.a.f	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00390000013008	ENSGT00940000161584.s.a #7	ENSGT00390000015500 #9	ENSGT00940000157675 #11	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711 #25	ENSGT00940000155930 #26
Asian bonytongue	MODERN SPECIES	23	mta3 (ENSSFOG00015000760)	OXER1 (ENSSFOG00015000768)	ENSSFOG00015026605	haao (ENSSFOG00015000770)	zfp36l2 (ENSSFOG00015032756) #7	THADA (ENSSFOG00015000782) #9	PLEKHH2 (ENSSFOG00015000810) #11	dync2li1 (ENSSFOG00015000929)	abcg5 (ENSSFOG00015000938) #12	abcg8 (ENSSFOG00015000995) #13	LRPPRC (ENSSFOG00015001042) #14	ppm1ba (ENSSFOG00015001047) #17	SLC3A1 (ENSSFOG00015001079) #18	prepl (ENSSFOG00015001085) #19	CAMKMT (ENSSFOG00015001093) #20	six3a (ENSSFOG00015001111) #22	six2a (ENSSFOG00015027707) #23	SRBD1 (ENSSFOG00015001128) #24	PRKCE (ENSSFOG00015001283) #25	epas1b (ENSSFOG00015001376) #26	rhoq (ENSSFOG00015032488) #28	gch2 (ENSSFOG00015030339)	socs5b (ENSSFOG00015001455)	ENSSFOG00015001463	mcfd2 (ENSSFOG00015001471) #34	TTC7A (ENSSFOG00015001488) #35	calm2a (ENSSFOG00015001500) #37	ENSSFOG00015024584	ENSSFOG00015001588	epcam (ENSSFOG00015001618)	KCNK12 (ENSSFOG00015001638)
P. kingsleyae	MODERN SPECIES	74	tcn2 (ENSPKIG00000022785)	haao (ENSPKIG00000022771)	ENSPKIG00000022755	zfp36l2 (ENSPKIG00000022742) #7	THADA (ENSPKIG00000022654) #9	PLEKHH2 (ENSPKIG00000022510) #11	dync2li1 (ENSPKIG00000022455)	abcg5 (ENSPKIG00000022422) #12	abcg8 (ENSPKIG00000022373) #13	LRPPRC (ENSPKIG00000022232) #14	ppm1ba (ENSPKIG00000022180) #17	SLC3A1 (ENSPKIG00000022161) #18	prepl (ENSPKIG00000022136) #19	ENSPKIG00000022124	CAMKMT (ENSPKIG00000022102) #20	six3a (ENSPKIG00000022071) #22	six2a (ENSPKIG00000022042) #23	SRBD1 (ENSPKIG00000021973) #24	PRKCE (ENSPKIG00000021922) #25	epas1b (ENSPKIG00000021883) #26	rhoq (ENSPKIG00000021865) #28	cript (ENSPKIG00000021848) #30	gch2 (ENSPKIG00000021816)	socs5b (ENSPKIG00000021801)	ENSPKIG00000021786	mcfd2 (ENSPKIG00000021779) #34	ENSPKIG00000021765	TTC7A (ENSPKIG00000021686) #35	si:ch211-93n23.7 (ENSPKIG00000021652)	CALM2 (ENSPKIG00000021634) #37	ENSPKIG00000021614
Clupeocephala	ANCESTRAL SPECIES	88	ENSGT00940000162691	ENSGT00390000015553.a.a.b	ENSGT00940000155092.b	ENSGT00940000157060	ENSGT00940000164292	ENSGT00940000155103.a.a	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711.a.a #25	ENSGT00940000155930 #26	ENSGT00390000000854.c.a	ENSGT00950000183175.A.d.b
Otomorpha	DUPLICATION
Otomorpha	ANCESTRAL SPECIES	475														ENSGT00940000156070.a.b ##17	ENSGT00940000160346.A ##22	ENSGT00940000160346.B.e #22	ENSGT00940000158292.a.a #23	ENSGT00940000154711.a.b #25	ENSGT00940000155930.g.b #26	ENSGT00390000000854.c.a	ENSGT00950000183175.A.d.b	ENSGT01030000234633.C.a.d
Otophysi	ANCESTRAL SPECIES	225	ENSGT00530000063425.a.a.b	ENSGT00550000074867	ENSGT00950000182980.a.b.b.b.hc #37	ENSGT00940000164285.a.e	ENSGT00390000013481.c.b.a	ENSGT00950000183100.C.f #30	ENSGT00390000016617 #29	ENSGT00940000155970 #28	ENSGT00940000154815.b.a	ENSGT00940000159658.b.a	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a.e.l	ENSGT00940000161584 #7	ENSGT00940000156070.a.b ##17	ENSGT00940000160346.A ##22	ENSGT00940000160346.B.e #22	ENSGT00940000158292.a.a #23	ENSGT00940000154711.a.b #25	ENSGT00940000155930.g.b #26	ENSGT00390000000854.c.a	ENSGT00950000183175.A.d.b	ENSGT01030000234633.C.a.d	ENSGT00940000156225	ENSGT00940000154877.C	ENSGT01100000263502.B.a.a.d.a.b	ENSGT00940000155571.B	ENSGT00950000183027.a.b.c.b	ENSGT00950000183054.b.c	ENSGT01090000259987.b.b.a.a.a.b
Cyprinoidei	ANCESTRAL SPECIES	18				ENSGT00550000074867	ENSGT00950000182980.a.b.b.b.hc #37	ENSGT00940000164285.a.e	ENSGT00390000013481.c.b.a	ENSGT00950000183100.C.f #30	ENSGT00390000016617 #29	ENSGT00940000155970 #28	ENSGT00940000154815.b.a	ENSGT00940000159658.b.a	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a.e.l	ENSGT00940000156070.a.b ##17	ENSGT00940000160346.B.e #22	ENSGT00940000158292.a.a #23	ENSGT00940000154711.a.b #25	ENSGT00940000155930.g.b #26	ENSGT00390000000854.c.a.f	ENSGT00950000183175.A.d.b	ENSGT01030000234633.C.a.d	ENSGT00940000156225	ENSGT00940000154877.C	ENSGT01100000263502.B.a.a.d.a.b	ENSGT00940000155571.B	ENSGT00950000183027.a.b.c.b	ENSGT00950000183054.b.c	ENSGT01090000259987.b.b.a.a.a.b	ENSGT00390000000111.a.n	ENSGT00940000164193
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	88	ENSGT00940000159118.p.a	ENSGT00530000063425.a.a.b.b	ENSGT00550000074867.q	ENSGT00950000182980.a.b.b.b.hc.b #37	ENSGT00940000164285.a.e.c	ENSGT00390000013481.c.b.a.g	ENSGT00950000183100.C.f #30	ENSGT00390000016617.t #29	ENSGT00940000155970.bb #28	ENSGT00940000154815.b.a.c.a.b	ENSGT00940000159658.b.a.b	ENSGT01030000234573.B.c.b.a.b	ENSGT00990000203619.A.b.b.b.a.e.l.d	ENSGT00940000161584.l.b #7	ENSGT00940000156070.a.b.b ##17	ENSGT00940000160346.B.e.a #22	ENSGT00940000158292.a.a.a #23	ENSGT00940000154711.a.b.b #25	ENSGT00940000155930.g.b.a #26	ENSGT00390000000854.c.a.f.a	ENSGT00390000000854.c.b.a	ENSGT00950000183175.A.d.b.a.a	ENSGT01030000234633.C.a.d.a	ENSGT00940000156225.k.a	ENSGT00940000154877.C.ub.b	ENSGT01100000263502.B.a.a.d.a.b.b	ENSGT00940000155571.B.g	ENSGT00950000183027.a.b.c.b.d	ENSGT00950000183054.b.c.c	ENSGT01090000259987.b.b.a.a.a.b.a	ENSGT00390000000111.a.n.d
Goldfish	MODERN SPECIES	30	foxn2b (ENSCARG00000038104)	ENSCARG00000038131	msh2 (ENSCARG00000038661)	calm2b (ENSCARG00000039693) #37	socs5a (ENSCARG00000039762)	gch2 (ENSCARG00000039792)	cript (ENSCARG00000039816) #30	pigf (ENSCARG00000039840) #29	rhoq (ENSCARG00000039851) #28	cox7a2l (ENSCARG00000039886)	KCNG3 (ENSCARG00000039891)	mta3 (ENSCARG00000040053)	OXER1 (ENSCARG00000045611)	zfp36l2 (ENSCARG00000045621) #7	ppm1bb (ENSCARG00000045649) ##17	six3b (ENSCARG00000045699) #22	six2b (ENSCARG00000045714) #23	PRKCE (ENSCARG00000045751) #25	EPAS1 (ENSCARG00000046819) #26	ENSCARG00000046838	sncgb (ENSCARG00000047014)	bmpr1ab (ENSCARG00000047052)	ldb3b (ENSCARG00000048377)	opn4b (ENSCARG00000048419)	USP54 (ENSCARG00000048510)	myoz1b (ENSCARG00000048546)	SYNPO2L (ENSCARG00000048568)	itgb3b (ENSCARG00000048660)	ndel1a (ENSCARG00000049090)	acsf2 (ENSCARG00000049255)	chad (ENSCARG00000049900)
Cyprininae_a	ANCESTRAL SPECIES	8	ENSGT00940000159118.p.a	ENSGT00530000063425.a.a.b.b	ENSGT00550000074867.q	ENSGT00950000182980.a.b.b.b.hc.b #37	ENSGT00940000164285.a.e.c	ENSGT00390000013481.c.b.a.g	ENSGT00950000183100.C.e.b #30	ENSGT00390000016617.t #29	ENSGT00940000155970.bb #28	ENSGT00940000154815.b.a.c.a.a	ENSGT00940000159658.b.a.b	ENSGT01030000234573.B.c.b.a.b	ENSGT00990000203619.A.b.b.b.a.e.l.d	ENSGT00940000161584.l.b #7	ENSGT00940000156070.a.b.b ##17	ENSGT00940000160346.B.e.a #22	ENSGT00940000158292.a.a.a #23	ENSGT00940000154711.a.b.b #25	ENSGT00940000155930.g.b.a #26	ENSGT00390000000854.c.a.f.a	ENSGT00950000183175.A.d.b.a.b	ENSGT01030000234633.C.a.d.a	ENSGT00940000156225.k.a	ENSGT00940000154877.C.ub.b	ENSGT01100000263502.B.a.a.d.a.b.b	ENSGT00940000155571.B.g	ENSGT00950000183027.a.b.c.b.d	ENSGT00950000183054.b.c.c	ENSGT01090000259987.b.b.a.a.a.b.a	ENSGT00390000000111.a.n.d	ENSGT00940000161826.C.s
Common carp reference	MODERN SPECIES	44	foxn2b (ENSCCRG00000002444)	ENSCCRG00000058473	msh2 (ENSCCRG00000079291)	calm2b (ENSCCRG00000064783) #37	socs5a (ENSCCRG00000059664)	gch2 (ENSCCRG00000060432)	cript (ENSCCRG00000056291) #30	pigf (ENSCCRG00000003343) #29	rhoq (ENSCCRG00000073831) #28	cox7a2l (ENSCCRG00000077249)	KCNG3 (ENSCCRG00000005654)	mta3 (ENSCCRG00000010443)	OXER1 (ENSCCRG00000073858)	zfp36l2 (ENSCCRG00000055269) #7	ppm1bb (ENSCCRG00000030208) ##17	six3b (ENSCCRG00000060810) #22	six2b (ENSCCRG00000044346) #23	ENSCCRG00000046601 #25	ENSCCRG00000015187 #26	ENSCCRG00000046132	sncgb (ENSCCRG00000080007)	ENSCCRG00000046163	bmpr1ab (ENSCCRG00000079036)	ldb3b (ENSCCRG00000007619)	opn4b (ENSCCRG00000007607)	USP54 (ENSCCRG00000048001)	myoz1b (ENSCCRG00000022104)	SYNPO2L (ENSCCRG00000071574)	itgb3b (ENSCCRG00000022120)	ndel1a (ENSCCRG00000022312)	chad (ENSCCRG00000051208)
Golden-line barbel	MODERN SPECIES	46	fshr (ENSSGRG00000043987)	foxn2b (ENSSGRG00000043985)	ENSSGRG00000043974	msh2 (ENSSGRG00000043582)	calm2b (ENSSGRG00000043494) #37	socs5a (ENSSGRG00000043490)	ENSSGRG00000043489	cript (ENSSGRG00000043488) #30	pigf (ENSSGRG00000043487) #29	rhoq (ENSSGRG00000043483) #28	cox7a2l (ENSSGRG00000043481)	mta3 (ENSSGRG00000043259)	OXER1 (ENSSGRG00000043254)	zfp36l2 (ENSSGRG00000043253) #7	ppm1bb (ENSSGRG00000043251) ##17	six3b (ENSSGRG00000043250) #22	six2b (ENSSGRG00000043249) #23	PRKCE (ENSSGRG00000043155) #25	EPAS1 (ENSSGRG00000043140) #26	glud1b (ENSSGRG00000042621)	ENSSGRG00000042602	ENSSGRG00000042600	bmpr1ab (ENSSGRG00000042201)	ldb3b (ENSSGRG00000042198)	USP54 (ENSSGRG00000042083)	myoz1b (ENSSGRG00000042073)	SYNPO2L (ENSSGRG00000042072)	ndel1a (ENSSGRG00000041969)	chad (ENSSGRG00000041964)	acsf2 (ENSSGRG00000041963)	ENSSGRG00000041962
Cyprininae	ANCESTRAL SPECIES	64	ENSGT00530000063425.a.a.b.a	ENSGT00550000074867.r	ENSGT00950000182980.a.b.b.b.hc.a #37	ENSGT00940000164285.a.e.d	ENSGT00390000013481.c.b.a.h	ENSGT00950000183100.C.e.a #30	ENSGT00390000016617.s #29	ENSGT00940000155970.ab #28	ENSGT00940000154815.b.a.c.a.a	ENSGT00940000154815.b.a.d	ENSGT00940000159658.b.a.a	ENSGT01030000234573.B.c.b.a.a	ENSGT00990000203619.A.b.b.b.a.e.l.c	ENSGT00940000161584.l.a #7	ENSGT00940000156070.a.b.a ##17	ENSGT00940000160346.B.e.b #22	ENSGT00940000158292.a.a.b #23	ENSGT00940000154711.a.b.a #25	ENSGT00940000155930.g.b.b #26	ENSGT00390000000854.c.a.f.b	ENSGT00950000183175.A.d.b.a.b	ENSGT01030000234633.C.a.d.b	ENSGT00940000156225.k.b	ENSGT00940000154877.C.ub.a	ENSGT01100000263502.B.a.a.d.a.b.a	ENSGT00940000155571.B.h	ENSGT00950000183027.a.b.c.b.c	ENSGT00950000183054.b.c.d	ENSGT01090000259987.b.b.a.a.a.b.b	ENSGT00390000000111.a.n.c	ENSGT00940000164193
Goldfish	MODERN SPECIES	3	CCDC186 (ENSCARG00000027403)	ENSCARG00000027315	tdrd1 (ENSCARG00000027078)	VWA2 (ENSCARG00000027046)	KBTBD13 (ENSCARG00000027038)	AFAP1L2 (ENSCARG00000026993)	ablim1b (ENSCARG00000024299)	trub1 (ENSCARG00000024199)	ATRNL1 (ENSCARG00000023283)	cox7a2l (ENSCARG00000023182)	KCNG3 (ENSCARG00000023177)	mta3 (ENSCARG00000020173)	OXER1 (ENSCARG00000020074)	zfp36l2 (ENSCARG00000020070) #7	ppm1bb (ENSCARG00000020062) ##17	Six3 (ENSCARG00000020052) #22	six2b (ENSCARG00000020042) #23	PRKCE (ENSCARG00000019584) #25	EPAS1 (ENSCARG00000019497) #26	ENSCARG00000019352	sncgb (ENSCARG00000019338)	ENSCARG00000019331	bmpr1ab (ENSCARG00000018006)	ldb3b (ENSCARG00000017892)	USP54 (ENSCARG00000017787)	myoz1b (ENSCARG00000017768)	SYNPO2L (ENSCARG00000017759)	itgb3b (ENSCARG00000017332)	ndel1a (ENSCARG00000017295)	armc7 (ENSCARG00000017282)	ENSCARG00000017277
Cyprininae_a	ANCESTRAL SPECIES	18	ENSGT00940000159118.p.b	ENSGT00530000063425.a.a.b.a	ENSGT00550000074867.r	ENSGT00950000182980.a.b.b.b.hc.a #37	ENSGT00940000164285.a.e.d	ENSGT00390000013481.c.b.a.h	ENSGT00950000183100.C.f #30	ENSGT00390000016617.s #29	ENSGT00940000155970.ab #28	ENSGT00940000154815.b.a.d	ENSGT00940000159658.b.a.a	ENSGT01030000234573.B.c.b.a.a	ENSGT00990000203619.A.b.b.b.a.e.l.c	ENSGT00940000161584.l.a #7	ENSGT00940000156070.a.b.a ##17	ENSGT00940000160346.B.e.b #22	ENSGT00940000158292.a.a.b #23	ENSGT00940000154711.a.b.a #25	ENSGT00940000155930.g.b.b #26	ENSGT00950000183175.A.d.b.b	ENSGT01030000234633.C.a.d.b	ENSGT00940000156225.k.b	ENSGT00940000154877.C.ub.a	ENSGT01100000263502.B.a.a.d.a.b.a	ENSGT00940000155571.B.h	ENSGT00950000183027.a.b.c.b.c	ENSGT00950000183054.b.c.d	ENSGT01090000259987.b.b.a.a.a.b.b	ENSGT00390000000111.a.n.c	ENSGT00940000164193	ENSGT00940000156830.a.c
Common carp reference	MODERN SPECIES	25	foxn2b (ENSCCRG00000067390)	ENSCCRG00000002427	msh2 (ENSCCRG00000061893)	calm2b (ENSCCRG00000082265) #37	socs5a (ENSCCRG00000061434)	gch2 (ENSCCRG00000067312)	cript (ENSCCRG00000019690) #30	pigf (ENSCCRG00000070582) #29	rhoq (ENSCCRG00000019701) #28	cox7a2l (ENSCCRG00000056079)	KCNG3 (ENSCCRG00000062429)	mta3 (ENSCCRG00000064946)	OXER1 (ENSCCRG00000069397)	zfp36l2 (ENSCCRG00000066647) #7	ppm1bb (ENSCCRG00000073667) ##17	six3b (ENSCCRG00000032637) #22	six2b (ENSCCRG00000011444) #23	ENSCCRG00000015198 #25	ENSCCRG00000046613 #26	ENSCCRG00000046628	sncgb (ENSCCRG00000046145)	ENSCCRG00000046633	bmpr1ab (ENSCCRG00000081366)	ldb3b (ENSCCRG00000047452)	opn4b (ENSCCRG00000047457)	USP54 (ENSCCRG00000025421)	myoz1b (ENSCCRG00000048017)	SYNPO2L (ENSCCRG00000060038)	itgb3b (ENSCCRG00000048051)	acsf2 (ENSCCRG00000022316)	chad (ENSCCRG00000073446)
Golden-line barbel	MODERN SPECIES	385	ENSSGRG00000021846	fshr (ENSSGRG00000021848)	foxn2b (ENSSGRG00000021850)	ENSSGRG00000021874	msh2 (ENSSGRG00000022768)	calm2b (ENSSGRG00000022781) #37	gch2 (ENSSGRG00000022901)	cript (ENSSGRG00000022908) #30	pigf (ENSSGRG00000022912) #29	rhoq (ENSSGRG00000022913) #28	cox7a2l (ENSSGRG00000022914)	mta3 (ENSSGRG00000022920)	OXER1 (ENSSGRG00000023152)	zfp36l2 (ENSSGRG00000023154) #7	ppm1bb (ENSSGRG00000023155) ##17	six3b (ENSSGRG00000023158) #22	six2b (ENSSGRG00000023159) #23	PRKCE (ENSSGRG00000023162) #25	EPAS1 (ENSSGRG00000023397) #26	ENSSGRG00000023467	sncgb (ENSSGRG00000024280)	ENSSGRG00000024281	bmpr1ab (ENSSGRG00000024283)
Zebrafish	MODERN SPECIES	3	foxn2b (ENSDARG00000045105)	ENSDARG00000061631	msh2 (ENSDARG00000018022)	calm2b (ENSDARG00000015050) #37	socs5a (ENSDARG00000100717)	gch2 (ENSDARG00000099101)	cript (ENSDARG00000102511) #30	pigf (ENSDARG00000032780) #29	rhoq (ENSDARG00000025953) #28	cox7a2l (ENSDARG00000054907)	KCNG3 (ENSDARG00000061622)	mta3 (ENSDARG00000054903)	OXER1 (ENSDARG00000087084)	zfp36l2 (ENSDARG00000021806) #7	ppm1bb (ENSDARG00000011496) ##17	six3b (ENSDARG00000054879) #22	six2b (ENSDARG00000054878) #23	PRKCE (ENSDARG00000003008) #25	EPAS1 (ENSDARG00000008697) #26	glud1b (ENSDARG00000101074)	si:dkey-193p11.2 (ENSDARG00000096712)	sncgb (ENSDARG00000109715)	ENSDARG00000073711	bmpr1ab (ENSDARG00000105045)	ldb3b (ENSDARG00000099974)	opn4b (ENSDARG00000053929)	USP54 (ENSDARG00000077749)	myoz1b (ENSDARG00000071445)	SYNPO2L (ENSDARG00000078696)	itgb3b (ENSDARG00000045070)	ndel1a (ENSDARG00000010953)
Characiphysae	ANCESTRAL SPECIES	93	ENSGT00390000018245	ENSGT00940000167711.a.a	ENSGT00940000164251.c	ENSGT00950000182980.a.b.b.b.hc #37	ENSGT00940000164285.a.e	ENSGT00390000013481.c.b.a	ENSGT00950000183100.C.f #30	ENSGT00390000016617 #29	ENSGT00940000155970 #28	ENSGT00940000154815.b.a	ENSGT00940000159658.b.a	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a.e.l	ENSGT00940000156070.a.b ##17	ENSGT00940000160346.A ##22	ENSGT00940000160346.B.e #22	ENSGT00940000158292.a.a #23	ENSGT00940000154711.a.b #25	ENSGT00940000155930.g.b #26	ENSGT00390000000854.c.a	ENSGT00950000183175.A.d.b	ENSGT01030000234633.C.a.d	ENSGT00940000156225	ENSGT00940000154877.C	ENSGT01100000263502.B.a.a.d.a.b	ENSGT00940000155571.B	ENSGT00950000183027.a.b.c.b	ENSGT00950000183054.b.c	ENSGT01090000259987.b.b.a.a.a.b	ENSGT00390000000111.a.n	ENSGT00390000012745
Characiphysae_b	ANCESTRAL SPECIES	3	ENSGT00390000018245	ENSGT00940000167711.a.a	ENSGT00940000164251.c	ENSGT00950000182980.a.b.b.b.hc #37	ENSGT00940000164285.a.e	ENSGT00390000013481.c.b.a	ENSGT00950000183100.C.f #30	ENSGT00390000016617 #29	ENSGT00940000155970 #28	ENSGT00940000154815.b.a	ENSGT00940000159658.b.a	ENSGT01030000234573.B.c.b.a	ENSGT00990000203619.A.b.b.b.a.e.l	ENSGT00940000156070.a.b ##17	ENSGT00940000160346.A ##22	ENSGT00940000160346.B.e #22	ENSGT00940000158292.a.a #23	ENSGT00940000154711.a.b #25	ENSGT00940000155930.g.b #26	ENSGT00390000000854.c.a	ENSGT00950000183175.A.d.b	ENSGT01030000234633.C.a.d	ENSGT00940000156225	ENSGT00940000154877.C	ENSGT01100000263502.B.a.a.d.a.b	ENSGT00940000155571.B	ENSGT00950000183027.a.b.c.b	ENSGT00950000183054.b.c	ENSGT01090000259987.b.b.a.a.a.b	ENSGT00390000000111.a.n	ENSGT00390000012745
Electric eel	MODERN SPECIES	62	fshr (ENSEEEG00000016483)	foxn2b (ENSEEEG00000016493)	ENSEEEG00000016499	msh2 (ENSEEEG00000016977)	ENSEEEG00000016980	calm2b (ENSEEEG00000016981) #37	gch2 (ENSEEEG00000016983)	cript (ENSEEEG00000016984) #30	pigf (ENSEEEG00000016985) #29	rhoq (ENSEEEG00000016986) #28	cox7a2l (ENSEEEG00000016987)	KCNG3 (ENSEEEG00000016988)	mta3 (ENSEEEG00000016994)	zfp36l2 (ENSEEEG00000017042) #7	ppm1bb (ENSEEEG00000017043) ##17	six3b (ENSEEEG00000017045) #22	six2b (ENSEEEG00000017047) #23	PRKCE (ENSEEEG00000017048) #25	EPAS1 (ENSEEEG00000017053) #26	glud1b (ENSEEEG00000017058)	sncgb (ENSEEEG00000017222)	ENSEEEG00000017228	bmpr1ab (ENSEEEG00000017239)	ldb3b (ENSEEEG00000017481)	opn4b (ENSEEEG00000017483)	ENSEEEG00000017486	myoz1b (ENSEEEG00000017488)	SYNPO2L (ENSEEEG00000017490)	itgb3b (ENSEEEG00000017617)	ndel1a (ENSEEEG00000019921)	nat9 (ENSEEEG00000019922)
Clupeiformes	ANCESTRAL SPECIES																	ENSGT00940000160346.B.e #22
Atlantic herring	MODERN SPECIES	7	vhll (ENSCHAG00000022755)	tmbim4 (ENSCHAG00000022759)	foxn2b (ENSCHAG00000022771)	socs5a (ENSCHAG00000022777)	pigf (ENSCHAG00000022780) #29	rhoq (ENSCHAG00000022790) #28	SYNPO2L (ENSCHAG00000022808)	myoz1b (ENSCHAG00000022813)	ENSCHAG00000022828	OPN4 (ENSCHAG00000022846)	ldb3b (ENSCHAG00000022954)	dusp12 (ENSCHAG00000022961)	mta3 (ENSCHAG00000023005)	KCNG3 (ENSCHAG00000023310)	ppm1bb (ENSCHAG00000023318) ##17	six3b (ENSCHAG00000023331) #22	ITLN1 (ENSCHAG00000023334)	PRKCE (ENSCHAG00000023351) #25	ENSCHAG00000023576 #26	glud1b (ENSCHAG00000023618)	ENSCHAG00000023665	bmpr1ab (ENSCHAG00000023695)	ENSCHAG00000024268	samd8 (ENSCHAG00000024278)	ENSCHAG00000024313	ENSCHAG00000024329	prickle1b (ENSCHAG00000024638)	ENSCHAG00000024650	pus7l (ENSCHAG00000024665)	twf1b (ENSCHAG00000024685)	ENSCHAG00000024699
Otomorpha	ANCESTRAL SPECIES	32	ENSGT00730000111005	ENSGT00940000162691	ENSGT00390000015553.a.a.b	ENSGT00940000155092.b	ENSGT00940000157060	ENSGT00940000164292	ENSGT00940000155103.a.a	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B.f #22	ENSGT00940000158292.a.b #23	ENSGT00510000047850 #24	ENSGT00940000155970 #28	ENSGT00940000155930.g.a #26	ENSGT00940000154711.a.a #25	ENSGT00940000164285.a.f	ENSGT00940000165391	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00940000167263	ENSGT00950000182980.a.b.b.b.gc #37	ENSGT00730000110943.B.c	ENSGT00940000167711.a.a	ENSGT00940000164251.c	ENSGT00940000165409.e.a
Otophysi	ANCESTRAL SPECIES		ENSGT00730000111005	ENSGT00940000162691	ENSGT00390000015553.a.a.b	ENSGT00940000155092.b	ENSGT00940000157060	ENSGT00940000164292	ENSGT00940000155103.a.a	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B.f #22	ENSGT00940000158292.a.b #23	ENSGT00510000047850 #24	ENSGT00940000155930.g.a #26	ENSGT00940000154711.a.a #25	ENSGT00940000164285.a.f	ENSGT00940000165391	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00940000167263	ENSGT00950000182980.a.b.b.b.gc #37	ENSGT00730000110943.B.c	ENSGT00940000167711.a.b	ENSGT00940000164251.c	ENSGT00940000167711.a.a	ENSGT00390000018245
Cyprinoidei	ANCESTRAL SPECIES	5	ENSGT00730000111005	ENSGT00940000162691	ENSGT00390000015553.a.a.b	ENSGT00940000155092.b	ENSGT00940000157060	ENSGT00940000164292	ENSGT00940000155103.a.a	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B.f #22	ENSGT00940000158292.a.b #23	ENSGT00510000047850.f #24	ENSGT00510000047850.e #24	ENSGT00940000165086.b	ENSGT00940000155493	ENSGT00940000153430.a.b	ENSGT01030000234641.a.b	ENSGT00940000164222	ENSGT00730000111063.b	ENSGT00940000157425.B	ENSGT00940000158482	ENSGT00390000008978	ENSGT00940000165556.a.a	ENSGT00940000157814	ENSGT01100000263515.a.b.a.b.b.k.b.a.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	62	ENSGT00940000164014.a.a.f	ENSGT00730000111005.r.b	ENSGT00940000162691	ENSGT00390000015553.a.a.b.e	ENSGT00940000155092.b.m	ENSGT00940000157060.d	ENSGT00940000164292.a.a	ENSGT00940000155103.a.a.d	ENSGT00940000157985.b #12	ENSGT00940000159739.b #13	ENSGT00960000186682.g #14	ENSGT00940000156070.a.a.j #17	ENSGT00940000158103 #18	ENSGT00530000063426.a.d #19	ENSGT00390000002168.a #20	ENSGT00940000160346.B.f.a #22	ENSGT00940000158292.a.b.b.a.a #23	ENSGT00510000047850.f.a #24	ENSGT00940000165086.b.g.b	ENSGT00940000155493.i	ENSGT00940000153430.a.b.b	ENSGT01030000234641.a.b.a	ENSGT00940000164222.b	ENSGT00730000111063.b.a	ENSGT00940000157425.B	ENSGT00940000158482.d	ENSGT00390000008978.cb	ENSGT00940000165556.a.a	ENSGT00940000157814.x.b	ENSGT00940000155790.d	ENSGT01100000263515.a.b.a.b.b.k.b.a.b.d
Cyprininae_a	ANCESTRAL SPECIES	32	ENSGT00940000164014.a.a.f	ENSGT00730000111005.r.b	ENSGT00940000162691	ENSGT00390000015553.a.a.b.e	ENSGT00940000155092.b.m	ENSGT00940000157060.d	ENSGT00940000164292.a.a	ENSGT00940000155103.a.a.d	ENSGT00940000157985.b #12	ENSGT00940000159739.b #13	ENSGT00960000186682.g #14	ENSGT00940000156070.a.a.j #17	ENSGT00940000158103 #18	ENSGT00530000063426.a.d #19	ENSGT00390000002168.a #20	ENSGT00940000160346.B.f.a #22	ENSGT00940000158292.a.b.b.a.a #23	ENSGT00510000047850.f.a #24	ENSGT00940000165086.b.g.b	ENSGT00940000155493.i	ENSGT00940000153430.a.b.b	ENSGT01030000234641.a.b.a	ENSGT00940000164222.b	ENSGT00730000111063.b.a	ENSGT00940000157425.B.a	ENSGT00940000158482.d	ENSGT00390000008978.cb	ENSGT00940000165556.a.a	ENSGT00940000157814.x.b	ENSGT00940000155790.d	ENSGT01100000263515.a.b.a.b.b.k.b.a.b.d
Golden-line barbel	MODERN SPECIES	327											ppm1ba (ENSSGRG00000013831) #17	ENSSGRG00000013830 #18	SLC3A1 (ENSSGRG00000013829) #18	prepl (ENSSGRG00000013828) #19	CAMKMT (ENSSGRG00000013827) #20	six3a (ENSSGRG00000013824) #22	six2a (ENSSGRG00000013823) #23	SRBD1 (ENSSGRG00000013822) #24	tm9sf3 (ENSSGRG00000013616)	prdx3 (ENSSGRG00000013574)	sfxn4 (ENSSGRG00000013569)	dennd10 (ENSSGRG00000013563)	eif3s10 (ENSSGRG00000013560)	emx2 (ENSSGRG00000013559)	RAB11FIP2 (ENSSGRG00000013558)	fam204a (ENSSGRG00000013557)	ENSSGRG00000013555	ATRNL1 (ENSSGRG00000013099)
Common carp reference	MODERN SPECIES	48	ENSCCRG00000048249	desi2 (ENSCCRG00000062035)	CATSPERE (ENSCCRG00000047791)	adss2 (ENSCCRG00000032068)	zbtb18 (ENSCCRG00000068370)	akt3a (ENSCCRG00000039019)	sdccag8 (ENSCCRG00000042665)	ENSCCRG00000022865	abcg5 (ENSCCRG00000022912) #12	abcg8 (ENSCCRG00000042677) #13	LRPPRC (ENSCCRG00000042706) #14	ppm1ba (ENSCCRG00000007146) #17	SLC3A1 (ENSCCRG00000074378) #18	prepl (ENSCCRG00000072705) #19	CAMKMT (ENSCCRG00000081834) #20	six3a (ENSCCRG00000074911) #22	six2a (ENSCCRG00000056976) #23	SRBD1 (ENSCCRG00000080746) #24	ENSCCRG00000026483	tm9sf3 (ENSCCRG00000051877)	prdx3 (ENSCCRG00000072654)	sfxn4 (ENSCCRG00000026322)	dennd10 (ENSCCRG00000026313)	eif3s10 (ENSCCRG00000034932)	emx2 (ENSCCRG00000070882)	ENSCCRG00000072504	fam204a (ENSCCRG00000076067)	ENSCCRG00000082057	ENSCCRG00000011525	ATRNL1 (ENSCCRG00000030528)	apcs (ENSCCRG00000041681)
Goldfish	MODERN SPECIES	31	ENSCARG00000011026	ENSCARG00000011031	DCTN1 (ENSCARG00000011119)	ENSCARG00000013118	desi2 (ENSCARG00000013123)	CATSPERE (ENSCARG00000013133)	adss2 (ENSCARG00000013162)	zbtb18 (ENSCARG00000013997)	akt3a (ENSCARG00000014112)	sdccag8 (ENSCARG00000016636)	ENSCARG00000016703	LRPPRC (ENSCARG00000016911) #14	ppm1ba (ENSCARG00000022139) #17	SLC3A1 (ENSCARG00000022161) #18	CAMKMT (ENSCARG00000022218) #20	six3a (ENSCARG00000022254) #22	six2a (ENSCARG00000022266) #23	SRBD1 (ENSCARG00000022306) #24	ENSCARG00000022582	tm9sf3 (ENSCARG00000022629)	prdx3 (ENSCARG00000023198)	sfxn4 (ENSCARG00000023240)	dennd10 (ENSCARG00000023306)	eif3s10 (ENSCARG00000023366)	RAB11FIP2 (ENSCARG00000023456)	fam204a (ENSCARG00000023465)	ENSCARG00000023470	ENSCARG00000023475	ATRNL1 (ENSCARG00000023570)	apcs (ENSCARG00000023890)	GFRA1 (ENSCARG00000023905)
Cyprininae	ANCESTRAL SPECIES	347	ENSGT00940000155378.c.a.f	ENSGT00940000164014.a.a.e	ENSGT00730000111005.r.a	ENSGT00390000015553.a.a.b.f	ENSGT00940000155092.b.n	ENSGT00940000157060.c	ENSGT00940000164292.a.b	ENSGT00940000155103.a.a.c	ENSGT00390000010498	ENSGT00940000157985.a #12	ENSGT00940000159739.a.a #13	ENSGT00960000186682.h #14	ENSGT00940000156070.a.a.i #17	ENSGT00530000063426.a.c.a #19	ENSGT00390000002168.b #20	ENSGT00940000160346.B.f.b #22	ENSGT00940000158292.a.b.a #23	ENSGT00510000047850.f.b #24
Cyprininae_a	ANCESTRAL SPECIES	171	ENSGT00940000155378.c.a.f	ENSGT00940000164014.a.a.e	ENSGT00730000111005.r.a	ENSGT00390000015553.a.a.b.f	ENSGT00940000155092.b.n	ENSGT00940000157060.c	ENSGT00940000164292.a.b	ENSGT00940000155103.a.a.c	ENSGT00390000010498	ENSGT00940000157985.a #12	ENSGT00940000159739.a.a #13	ENSGT00960000186682.h #14	ENSGT00940000156070.a.a.i #17	ENSGT00530000063426.a.c.a #19	ENSGT00390000002168.b #20	ENSGT00940000160346.B.f.b #22	ENSGT00940000158292.a.b.a #23	ENSGT00510000047850.f.b #24	ENSGT00940000165086.b.g.a	ENSGT00940000155493.j	ENSGT00940000153430.a.b.a	ENSGT01030000234641.a.b.b	ENSGT00940000164222.a	ENSGT00730000111063.b.b	ENSGT00940000157425.B.b	ENSGT00940000158482.c	ENSGT00390000008978.bb	ENSGT00940000157814.x.a.b
Common carp reference	MODERN SPECIES	18	ENSCCRG00000014483	desi2 (ENSCCRG00000068243)	zbtb18 (ENSCCRG00000056240)	adss2 (ENSCCRG00000061240)	akt3a (ENSCCRG00000078273)	ENSCCRG00000053399	ENSCCRG00000058832	ENSCCRG00000004047	dync2li1 (ENSCCRG00000004034)	abcg5 (ENSCCRG00000003387) #12	abcg8 (ENSCCRG00000003358) #13	LRPPRC (ENSCCRG00000079926) #14	ppm1ba (ENSCCRG00000032362) #17	prepl (ENSCCRG00000032376) #19	CAMKMT (ENSCCRG00000007152) #20	six3a (ENSCCRG00000070032) #22	six2a (ENSCCRG00000049667) #23	ENSCCRG00000056185 #24	ENSCCRG00000061795	ENSCCRG00000035077	ENSCCRG00000051884	tm9sf3 (ENSCCRG00000026394)	prdx3 (ENSCCRG00000062141)	sfxn4 (ENSCCRG00000078886)	dennd10 (ENSCCRG00000051871)	eif3s10 (ENSCCRG00000051850)	emx2 (ENSCCRG00000064661)	ENSCCRG00000057436	fam204a (ENSCCRG00000080309)	ENSCCRG00000045633	ENSCCRG00000053046
Golden-line barbel	MODERN SPECIES	67	DCTN1 (ENSSGRG00000023487)	ENSSGRG00000024555	desi2 (ENSSGRG00000024556)	adss2 (ENSSGRG00000024557)	zbtb18 (ENSSGRG00000024707)	akt3a (ENSSGRG00000024708)	sdccag8 (ENSSGRG00000024709)	ENSSGRG00000024710	ENSSGRG00000024712	dync2li1 (ENSSGRG00000024718)	abcg5 (ENSSGRG00000024827) #12	LRPPRC (ENSSGRG00000024832) #14	ppm1ba (ENSSGRG00000025266) #17	ENSSGRG00000025268 #18	CAMKMT (ENSSGRG00000025270) #20	six3a (ENSSGRG00000025273) #22	ENSSGRG00000025274	ENSSGRG00000025275	ENSSGRG00000025276	six2a (ENSSGRG00000025278) #23	SRBD1 (ENSSGRG00000025279) #24	si:ch211-117n7.7 (ENSSGRG00000025851)	tm9sf3 (ENSSGRG00000025864)	prdx3 (ENSSGRG00000026126)	dennd10 (ENSSGRG00000026128)	eif3s10 (ENSSGRG00000026147)	emx2 (ENSSGRG00000026216)	RAB11FIP2 (ENSSGRG00000026217)	fam204a (ENSSGRG00000026218)	ENSSGRG00000026220
Goldfish	MODERN SPECIES	4	DCTN1 (ENSCARG00000020050)	desi2 (ENSCARG00000019878)	ENSCARG00000019862	adss2 (ENSCARG00000018814)	zbtb18 (ENSCARG00000018763)	akt3a (ENSCARG00000018677)	sdccag8 (ENSCARG00000018631)	ENSCARG00000018625	dync2li1 (ENSCARG00000018433)	abcg5 (ENSCARG00000018311) #12	abcg8 (ENSCARG00000018032) #13	ENSCARG00000017953 #14	ppm1ba (ENSCARG00000017935) #17	prepl (ENSCARG00000017911) #19	CAMKMT (ENSCARG00000017889) #20	six3a (ENSCARG00000017877) #22	ENSCARG00000017870	six2a (ENSCARG00000017861) #23	ENSCARG00000017837	il22ra2 (ENSCARG00000017775)	prim2 (ENSCARG00000017680)	khdrbs2 (ENSCARG00000017655)	ENSCARG00000017632	ENSCARG00000017608	kifbp (ENSCARG00000017599)	ENSCARG00000017594	vps26a (ENSCARG00000017477)	supv3l1 (ENSCARG00000017396)	hkdc1 (ENSCARG00000017374)	hk1 (ENSCARG00000012997)	tacr2 (ENSCARG00000012878)
Zebrafish	MODERN SPECIES	4	desi2 (ENSDARG00000004460)	adss2 (ENSDARG00000002071)	zbtb18 (ENSDARG00000028228)	akt3a (ENSDARG00000104810)	sdccag8 (ENSDARG00000078947)	ENSDARG00000006128	dync2li1 (ENSDARG00000039770)	abcg5 (ENSDARG00000063078) #12	abcg8 (ENSDARG00000063059) #13	lrpprc (ENSDARG00000043970)	ppm1ba (ENSDARG00000001888) #17	SLC3A1 (ENSDARG00000017165) #18	prepl (ENSDARG00000017853) #19	ENSDARG00000091900 #20	CAMKMT (ENSDARG00000095224) #20	six3a (ENSDARG00000058008) #22	six2a (ENSDARG00000058004) #23	ENSDARG00000079827 #24	SRBD1 (ENSDARG00000092855) #24	ENSDARG00000092071	si:ch211-117n7.7 (ENSDARG00000069828)	tm9sf3 (ENSDARG00000028748)	prdx3 (ENSDARG00000032102)	sfxn4 (ENSDARG00000069832)	dennd10 (ENSDARG00000062965)	SEMA4G (ENSDARG00000076595)	ENSDARG00000003328	CPXM1 (ENSDARG00000073716)	wdr32 (ENSDARG00000029600)	pomk (ENSDARG00000003208)	ENSDARG00000110600
Characiphysae	ANCESTRAL SPECIES	92	ENSGT00940000164014.a.a	ENSGT00730000111005	ENSGT00390000015553.a.a.b	ENSGT00940000155092.b	ENSGT00940000157060	ENSGT00940000164292	ENSGT00940000155103.a.a	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B.f #22	ENSGT00940000158292.a.b #23	ENSGT00510000047850 #24	ENSGT00940000155930.g.a #26	ENSGT00940000154711.a.a #25	ENSGT00940000164285.a.f	ENSGT00940000165391	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00940000167263	ENSGT00950000182980.a.b.b.b.gc #37	ENSGT00940000165409.e.a	ENSGT00940000164218.pb	ENSGT00940000157675 #11	ENSGT00390000015500 #9	ENSGT00940000161584 #7
Channel catfish	MODERN SPECIES	22	adss (ENSIPUG00000008865)	zbtb18 (ENSIPUG00000008912)	akt3 (ENSIPUG00000008940)	sdccag8 (ENSIPUG00000009043)	SUCNR1 (ENSIPUG00000009100)	ENSIPUG00000009131	ENSIPUG00000009151	dync2li1 (ENSIPUG00000009248)	ABCG5 (ENSIPUG00000009285) #12	abcg8 (ENSIPUG00000009358) #13	LRPPRC (ENSIPUG00000009406) #14	ppm1b (ENSIPUG00000009451) #17	slc3a1 (ENSIPUG00000009475) #18	prepl (ENSIPUG00000009542) #19	camkmt (ENSIPUG00000009592) #20	six3 (ENSIPUG00000009635) #22	six2 (ENSIPUG00000009646) #23	srbd1 (ENSIPUG00000009661) #24	epas1b (ENSIPUG00000009778) #26	PRKCE (ENSIPUG00000009870) #25	ENSIPUG00000009953	KLHL10 (ENSIPUG00000009959)	socs5b (ENSIPUG00000009973)	PROP1 (ENSIPUG00000009980)	mcfd2 (ENSIPUG00000009993) #34	ttc7a (ENSIPUG00000010011) #35	si:ch211-93n23.7 (ENSIPUG00000010034)	CALM (ENSIPUG00000010073) #37	ENSIPUG00000010117	ENSIPUG00000010128	epcam (ENSIPUG00000010141)
Characiphysae_b	ANCESTRAL SPECIES	91	ENSGT00940000164014.a.a	ENSGT00730000111005	ENSGT00390000015553.a.a.b	ENSGT00940000155092.b	ENSGT00940000157060	ENSGT00940000164292	ENSGT00940000155103.a.a	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B.f #22	ENSGT00940000158292.a.b #23	ENSGT00510000047850 #24	ENSGT00940000155930.g.a #26	ENSGT00940000154711.a.a #25	ENSGT00940000164285.a.f	ENSGT00940000165391	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00940000167263	ENSGT00950000182980.a.b.b.b.gc #37	ENSGT00940000165409.e.a	ENSGT00940000164218.pb	ENSGT00940000157675 #11	ENSGT00390000015500 #9	ENSGT00940000161584 #7
Characoidei	ANCESTRAL SPECIES	85	ENSGT00940000164014.a.a	ENSGT00730000111005	ENSGT00390000015553.a.a.b	ENSGT00940000155092.b	ENSGT00940000157060	ENSGT00940000164292	ENSGT00940000155103.a.a	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B.f #22	ENSGT00940000158292.a.b #23	ENSGT00510000047850 #24	ENSGT00940000155930.g.a #26	ENSGT00940000154711.a.a.a #25	ENSGT00940000164285.a.f	ENSGT00940000165391	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00940000167263	ENSGT00950000182980.a.b.b.b.gc #37	ENSGT00730000110943.B.c	ENSGT00940000167711.a.b	ENSGT00940000164251.c	ENSGT00940000167711.a.a	ENSGT00390000018245
Red-bellied piranha	MODERN SPECIES	15	ENSPNAG00000014129	desi2 (ENSPNAG00000014108)	zbtb18 (ENSPNAG00000014066)	adss2 (ENSPNAG00000014015)	akt3a (ENSPNAG00000013934)	sdccag8 (ENSPNAG00000013875)	ENSPNAG00000002973	dync2li1 (ENSPNAG00000007035)	abcg5 (ENSPNAG00000013764) #12	abcg8 (ENSPNAG00000002918) #13	LRPPRC (ENSPNAG00000002895) #14	ppm1ba (ENSPNAG00000013678) #17	prepl (ENSPNAG00000002856) #19	SLC3A1 (ENSPNAG00000013555) #18	CAMKMT (ENSPNAG00000002804) #20	six3a (ENSPNAG00000013510) #22	six2a (ENSPNAG00000002782) #23	SRBD1 (ENSPNAG00000013492) #24	epas1b (ENSPNAG00000013479) #26	PRKCE (ENSPNAG00000002772) #25	ENSPNAG00000013386	mcfd2 (ENSPNAG00000013379) #34	TTC7A (ENSPNAG00000013367) #35	si:ch211-93n23.7 (ENSPNAG00000013347)	calm2a (ENSPNAG00000013341) #37	ENSPNAG00000002711	ENSPNAG00000002696	ENSPNAG00000002683	epcam (ENSPNAG00000002669)	PLEKHH2 (ENSPNAG00000013260) #11	THADA (ENSPNAG00000013217) #9
Mexicana tetra	MODERN SPECIES	17	ENSAMXG00000003074	ENSAMXG00000041810	ENSAMXG00000030689	dync2li1 (ENSAMXG00000003123)	abcg5 (ENSAMXG00000004205) #12	abcg8 (ENSAMXG00000004239) #13	ENSAMXG00000004245 #14	ENSAMXG00000034268	ppm1ba (ENSAMXG00000004254) #17	SLC3A1 (ENSAMXG00000033380) #18	prepl (ENSAMXG00000004270) #19	ENSAMXG00000039583 #20	ENSAMXG00000040625	CAMKMT (ENSAMXG00000038785) #20	ENSAMXG00000040317	six3a (ENSAMXG00000004283) #22	six2a (ENSAMXG00000037922) #23	SRBD1 (ENSAMXG00000004294) #24	epas1b (ENSAMXG00000004315) #26	PRKCE (ENSAMXG00000004336) #25	thada (ENSAMXG00000037128) #9	PLEKHH2 (ENSAMXG00000004464) #11	epcam (ENSAMXG00000031147)	ENSAMXG00000043432	ENSAMXG00000004458	calm2a (ENSAMXG00000004452) #37	si:ch211-93n23.7 (ENSAMXG00000036165)	TTC7A (ENSAMXG00000004414) #35	mcfd2 (ENSAMXG00000043792) #34	ENSAMXG00000042713	socs5b (ENSAMXG00000025600)
Electric eel	MODERN SPECIES	171		adss2 (ENSEEEG00000007738)	ENSEEEG00000007737	akt3a (ENSEEEG00000007631)	sdccag8 (ENSEEEG00000007628)	ENSEEEG00000007626	ENSEEEG00000007624	dync2li1 (ENSEEEG00000007621)	abcg5 (ENSEEEG00000007617) #12	abcg8 (ENSEEEG00000007615) #13	LRPPRC (ENSEEEG00000007376) #14	ppm1ba (ENSEEEG00000007367) #17	SLC3A1 (ENSEEEG00000007360) #18	prepl (ENSEEEG00000007357) #19	CAMKMT (ENSEEEG00000007353) #20	six3a (ENSEEEG00000007345) #22	six2a (ENSEEEG00000007340) #23	ENSEEEG00000007339 #24	usf2 (ENSEEEG00000007336)	si:dkey-211g8.6 (ENSEEEG00000007333)	ENSEEEG00000007331	tekt2 (ENSEEEG00000007327)	olah (ENSEEEG00000007323)	ago3b (ENSEEEG00000006915)	slc9a3.1 (ENSEEEG00000006745)	ENSEEEG00000006719	lipea (ENSEEEG00000006653)	tomm40l (ENSEEEG00000006650)	apoa4a (ENSEEEG00000006630)	ENSEEEG00000006611	apoea (ENSEEEG00000006610)
Clupeiformes	ANCESTRAL SPECIES	35	ENSGT00940000164014.a.b.p	ENSGT00730000111005	ENSGT00390000015553.a.a.b	ENSGT00940000155092.b	ENSGT00940000157060	ENSGT00940000164292	ENSGT00940000155103.a.a	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B.f #22	ENSGT00940000158292.a.b #23	ENSGT00510000047850 #24	ENSGT00940000155930.g.a #26	ENSGT00940000154711.a.a #25	ENSGT00940000164285.a.f	ENSGT00940000165391	ENSGT00940000154141.B #34	ENSGT00940000158638 #35	ENSGT00950000182980.a.b.b.b.gc #37	ENSGT00730000110943.B.c	ENSGT00940000164251.c	ENSGT00940000167711.b	ENSGT00390000018245	ENSGT00940000157675 #11	ENSGT00390000015500 #9
Atlantic herring	MODERN SPECIES	4	ENSCHAG00000022831	desi2 (ENSCHAG00000022827)	adss2 (ENSCHAG00000022654)	zbtb18 (ENSCHAG00000022644)	akt3a (ENSCHAG00000021882)	sdccag8 (ENSCHAG00000021737)	ENSCHAG00000021685	dync2li1 (ENSCHAG00000021582)	abcg5 (ENSCHAG00000021025) #12	abcg8 (ENSCHAG00000020552) #13	LRPPRC (ENSCHAG00000019114) #14	ppm1ba (ENSCHAG00000019051) #17	SLC3A1 (ENSCHAG00000018877) #18	prepl (ENSCHAG00000018791) #19	ENSCHAG00000018777 #20	six3a (ENSCHAG00000018762) #22	six2a (ENSCHAG00000018739) #23	ENSCHAG00000018697 #24	ENSCHAG00000018672	ENSCHAG00000018649	ENSCHAG00000018307 #24	STK32C (ENSCHAG00000018261)	ENSCHAG00000018217	ENSCHAG00000018160	ENSCHAG00000018147	ENSCHAG00000018137	ENSCHAG00000018063	ENSCHAG00000018040	RAB11FIP2 (ENSCHAG00000018031)	emx2 (ENSCHAG00000018010)	eif3s10 (ENSCHAG00000016705)
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	99																six3a (ENSDCDG00000007692) #22	six2a (ENSDCDG00000007694) #23
Denticle herring	MODERN SPECIES	18	MAP3K21 (ENSDCDG00000016043)	PCNX2 (ENSDCDG00000016108)	rgs17 (ENSDCDG00000016752)	oprm1 (ENSDCDG00000016756)	sf3b5 (ENSDCDG00000016759)	ENSDCDG00000016762	agt (ENSDCDG00000016776)	dync2li1 (ENSDCDG00000016906)	abcg5 (ENSDCDG00000016918) #12	abcg8 (ENSDCDG00000017282) #13	LRPPRC (ENSDCDG00000017366) #14	ppm1ba (ENSDCDG00000019754) #17	SLC3A1 (ENSDCDG00000019761) #18	prepl (ENSDCDG00000019768) #19	CAMKMT (ENSDCDG00000019776) #20	six3a (ENSDCDG00000019783) #22	six2a (ENSDCDG00000019786) #23	SRBD1 (ENSDCDG00000019813) #24	epas1b (ENSDCDG00000020764) #26	PRKCE (ENSDCDG00000021271) #25	socs5b (ENSDCDG00000021418)	ENSDCDG00000021421	mcfd2 (ENSDCDG00000021424) #34	TTC7A (ENSDCDG00000021431) #35	calm2a (ENSDCDG00000021453) #37	ENSDCDG00000021493	ENSDCDG00000021494	ENSDCDG00000021496	epcam (ENSDCDG00000021497)	PLEKHH2 (ENSDCDG00000021507) #11	THADA (ENSDCDG00000021568) #9
Euteleosteomorpha	ANCESTRAL SPECIES	118	ENSGT00940000162691	ENSGT00390000015553.a.a.b	ENSGT00940000155092.b	ENSGT00940000157060	ENSGT00940000164292	ENSGT00940000155103.a.a	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711.a.a #25	ENSGT00940000155930 #26	ENSGT00390000000854.c.a	ENSGT00950000183175.A.d.b
Protacanthopterygii	ANCESTRAL SPECIES	4	ENSGT00730000111005	ENSGT00940000162691	ENSGT00390000015553.a.a.b	ENSGT00940000155092.b	ENSGT00940000157060	ENSGT00940000164292	ENSGT00940000155103.a.a	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000154711.a.a #25	ENSGT00940000155930 #26	ENSGT00940000155896.k	ENSGT00940000153956.a.b	ENSGT00940000157364.A	ENSGT00940000155669	ENSGT00940000156844.b	ENSGT00830000128368.b	ENSGT00940000157396	ENSGT00940000156503	ENSGT00730000111139	ENSGT00940000161424	ENSGT00550000075024
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	19	ENSGT00940000164014.a.b	ENSGT00940000164014.a.a	ENSGT00730000111005	ENSGT00390000015553.a.a.b.c	ENSGT00940000155092.b.i	ENSGT00940000157060	ENSGT00940000164292	ENSGT00940000155103.a.a.e	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a.f #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B.g #22	ENSGT00940000158292.a.c #23	ENSGT00510000047850 #24	ENSGT00940000154711.a.a.f.b.b.a.a #25	ENSGT00940000154711.a.a.f.b.a #25	ENSGT00940000155930.i.a #26	ENSGT00940000155896.k.a	ENSGT00940000153956.a.b.c	ENSGT00940000157364.A	ENSGT00940000155669.mc.a	ENSGT00940000156844.b.g.a	ENSGT00830000128368.b.e	ENSGT00940000156503.u	ENSGT00730000111139.m	ENSGT00940000161424.k.a	ENSGT00550000075024
Huchen	MODERN SPECIES	359															CAMKMT (ENSHHUG00000010247) #20	six3a (ENSHHUG00000010271) #22	six2a (ENSHHUG00000010299) #23	ENSHHUG00000010302	SRBD1 (ENSHHUG00000010309) #24	PRKCE (ENSHHUG00000010451) #25	epas1b (ENSHHUG00000010689) #26	pcgf5a (ENSHHUG00000011167)	ANKRD1 (ENSHHUG00000011176)	lhcgr (ENSHHUG00000011192)	MERTK (ENSHHUG00000011378)	ENSHHUG00000011477	ENSHHUG00000011495	ENSHHUG00000011498	ENSHHUG00000011504
Salmoninae_a	ANCESTRAL SPECIES	38	ENSGT00940000164014.a.b	ENSGT00940000164014.a.a	ENSGT00730000111005	ENSGT00390000015553.a.a.b.c	ENSGT00940000155092.b.i	ENSGT00940000157060	ENSGT00940000164292	ENSGT00940000155103.a.a.e	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a.f #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B.g #22	ENSGT00940000158292.a.c #23	ENSGT00510000047850 #24	ENSGT00940000154711.a.a.f.b.b.a.a #25	ENSGT00940000154711.a.a.f.b.a #25	ENSGT00940000155930.i.a #26	ENSGT00940000155896.k.a	ENSGT00940000153956.a.b.c	ENSGT00940000157364.A	ENSGT00940000155669.mc.a	ENSGT00940000156844.b.g.a	ENSGT00830000128368.b.e	ENSGT00940000157396.jc	ENSGT00940000156503.u	ENSGT00730000111139.m	ENSGT00940000161424.k.a
Salmo	ANCESTRAL SPECIES	38	ENSGT00940000164014.a.a	ENSGT00730000111005	ENSGT00980000201617.F.c.a	ENSGT00390000015553.a.a.b.c	ENSGT00940000155092.b.i	ENSGT00940000157060	ENSGT00940000164292	ENSGT00940000155103.a.a.e	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a.f #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B.g #22	ENSGT00940000158292.a.c #23	ENSGT00510000047850 #24	ENSGT00940000154711.a.a.f.b.a #25	ENSGT00940000155930.i.a #26	ENSGT00940000155896.k.a	ENSGT00940000153956.a.b.c	ENSGT00940000157364.A	ENSGT00940000155669.mc.a	ENSGT00940000156844.b.g.a	ENSGT00830000128368.b.e	ENSGT00940000157396.jc	ENSGT00940000156503.u	ENSGT00730000111139.m	ENSGT00940000161424.k.a	ENSGT00550000075024
Atlantic salmon	MODERN SPECIES	20	desi2 (ENSSSAG00000098449)	ENSSSAG00000118730	adss2 (ENSSSAG00000001368)	zbtb18 (ENSSSAG00000073767)	ENSSSAG00000099173	akt3a (ENSSSAG00000073814)	sdccag8 (ENSSSAG00000074340)	cep170 (ENSSSAG00000074354)	abcg5 (ENSSSAG00000074366) #12	abcg8 (ENSSSAG00000074412) #13	lrpprc (ENSSSAG00000074489) #14	ppm1ba (ENSSSAG00000075822) #17	slc3a1 (ENSSSAG00000008865) #18	prepl (ENSSSAG00000008896) #19	CAMKMT (ENSSSAG00000088784) #20	six3 (ENSSSAG00000009058) #22	six2a (ENSSSAG00000115557) #23	SRBD1 (ENSSSAG00000009214) #24	PRKCE (ENSSSAG00000015628) #25	EPAS1 (ENSSSAG00000030127) #26	ENSSSAG00000091220	ENSSSAG00000107465	ENSSSAG00000040256	lhcgr (ENSSSAG00000040374)	MERTK (ENSSSAG00000040437)	ENSSSAG00000002948	ENSSSAG00000100465	ZC3H6 (ENSSSAG00000040894)	ENSSSAG00000091255	itga9 (ENSSSAG00000040941)	ENSSSAG00000041544
River trout	MODERN SPECIES	1	desi2 (ENSSTUG00000002547)	ENSSTUG00000002567	adss2 (ENSSTUG00000002645)	zbtb18 (ENSSTUG00000004007)	akt3a (ENSSTUG00000004044)	ENSSTUG00000004728	sdccag8 (ENSSTUG00000004741)	ENSSTUG00000004798	abcg5 (ENSSTUG00000004866) #12	abcg8 (ENSSTUG00000005139) #13	LRPPRC (ENSSTUG00000005304) #14	ppm1ba (ENSSTUG00000007870) #17	SLC3A1 (ENSSTUG00000007889) #18	prepl (ENSSTUG00000007937) #19	CAMKMT (ENSSTUG00000007977) #20	six3a (ENSSTUG00000007991) #22	six2a (ENSSTUG00000008001) #23	SRBD1 (ENSSTUG00000008027) #24	ENSSTUG00000008688	PRKCE (ENSSTUG00000008705) #25	epas1b (ENSSTUG00000008875) #26	pcgf5a (ENSSTUG00000009370)	ANKRD1 (ENSSTUG00000009382)	lhcgr (ENSSTUG00000009424)	ENSSTUG00000009465	MERTK (ENSSTUG00000009479)	ENSSTUG00000009631	ENSSTUG00000009642	ENSSTUG00000009669	ZC3H6 (ENSSTUG00000009680)	itga9 (ENSSTUG00000009715)
Oncorhynchus	ANCESTRAL SPECIES	23	ENSGT00940000164014.a.b.i	ENSGT00940000164014.a.a	ENSGT00730000111005	ENSGT00390000015553.a.a.b.c	ENSGT00940000155092.b.i	ENSGT00940000157060	ENSGT00940000164292	ENSGT00940000155103.a.a.e	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a.f #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B.g #22	ENSGT00940000158292.a.c #23	ENSGT00510000047850.p #24	ENSGT00940000154711.a.a.f.b.b.a.a #25	ENSGT00940000155930.i.a #26	ENSGT00940000155896.k.a	ENSGT00940000153956.a.b.c	ENSGT00940000157364.A	ENSGT00940000155669.mc.a	ENSGT00940000156844.b.g.a	ENSGT00830000128368.b.e	ENSGT00940000157396.jc	ENSGT00940000156503.u	ENSGT00730000111139.m	ENSGT00940000161424.k.a	ENSGT00550000075024
Oncorhynchus_a	ANCESTRAL SPECIES	18	ENSGT00940000164014.a.b.i	ENSGT00940000164014.a.a	ENSGT00730000111005	ENSGT00390000015553.a.a.b.c	ENSGT00940000155092.b.i	ENSGT00940000157060	ENSGT00940000164292	ENSGT00940000155103.a.a.e	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00940000156070.a.a.f #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B.g #22	ENSGT00940000158292.a.c #23	ENSGT00510000047850.p #24	ENSGT00940000154711.a.a.f.b.b.a.a #25	ENSGT00940000155930.i.a #26	ENSGT00940000155896.k.a	ENSGT00940000153956.a.b.c	ENSGT00940000157364.A	ENSGT00940000155669.mc.a	ENSGT00940000156844.b.g.a	ENSGT00830000128368.b.e	ENSGT00940000157396.jc	ENSGT00940000156503.u	ENSGT00730000111139.m	ENSGT00940000161424.k.a	ENSGT00550000075024
Chinook salmon	MODERN SPECIES	17	ENSOTSG00005004835	desi2 (ENSOTSG00005004836)	adss2 (ENSOTSG00005004849)	zbtb18 (ENSOTSG00005006741)	akt3a (ENSOTSG00005006746)	sdccag8 (ENSOTSG00005006875)	ENSOTSG00005006876	abcg5 (ENSOTSG00005006879) #12	abcg8 (ENSOTSG00005007196) #13	LRPPRC (ENSOTSG00005007225) #14	ppm1ba (ENSOTSG00005012387) #17	SLC3A1 (ENSOTSG00005012390) #18	prepl (ENSOTSG00005012394) #19	ENSOTSG00005012396 #20	CAMKMT (ENSOTSG00005012397) #20	six3a (ENSOTSG00005012398) #22	six2a (ENSOTSG00005012400) #23	SRBD1 (ENSOTSG00005012420) #24	PRKCE (ENSOTSG00005016642) #25	epas1b (ENSOTSG00005016658) #26	pcgf5a (ENSOTSG00005017203)	ANKRD1 (ENSOTSG00005017205)	lhcgr (ENSOTSG00005017209)	MERTK (ENSOTSG00005017271)	ENSOTSG00005017273	ENSOTSG00005017277	ZC3H6 (ENSOTSG00005017280)	itga9 (ENSOTSG00005017301)	GOLGA4 (ENSOTSG00005017572)	KCNK12 (ENSOTSG00005017576)	msh6 (ENSOTSG00005017579)
Coho salmon	MODERN SPECIES	17	desi2 (ENSOKIG00005011423)	adss2 (ENSOKIG00005011490)	zbtb18 (ENSOKIG00005011764)	akt3a (ENSOKIG00005011894)	sdccag8 (ENSOKIG00005012733)	ENSOKIG00005012800	abcg5 (ENSOKIG00005012860) #12	abcg8 (ENSOKIG00005013031) #13	ENSOKIG00005013159	LRPPRC (ENSOKIG00005013350) #14	ppm1ba (ENSOKIG00005017533) #17	SLC3A1 (ENSOKIG00005017562) #18	ENSOKIG00005017603	prepl (ENSOKIG00005017614) #19	CAMKMT (ENSOKIG00005017625) #20	six3a (ENSOKIG00005017636) #22	six2a (ENSOKIG00005017646) #23	SRBD1 (ENSOKIG00005017709) #24	PRKCE (ENSOKIG00005018068) #25	ENSOKIG00005018668	epas1b (ENSOKIG00005018762) #26	pcgf5a (ENSOKIG00005020008)	ANKRD1 (ENSOKIG00005020019)	lhcgr (ENSOKIG00005020060)	MERTK (ENSOKIG00005020237)	ENSOKIG00005020407	ENSOKIG00005020425	ZC3H6 (ENSOKIG00005020439)	itga9 (ENSOKIG00005020483)	GOLGA4 (ENSOKIG00005020615)	KCNK12 (ENSOKIG00005020653)
Rainbow trout	MODERN SPECIES	12	ENSOMYG00000044485	desi2 (ENSOMYG00000044491)	adss2 (ENSOMYG00000044520)	zbtb18 (ENSOMYG00000044574)	akt3a (ENSOMYG00000044608)	sdccag8 (ENSOMYG00000045003)	ENSOMYG00000045027	abcg5 (ENSOMYG00000022760) #12	abcg8 (ENSOMYG00000022993) #13	LRPPRC (ENSOMYG00000023917) #14	ENSOMYG00000064819	ppm1ba (ENSOMYG00000027363) #17	SLC3A1 (ENSOMYG00000027409) #18	prepl (ENSOMYG00000027465) #19	CAMKMT (ENSOMYG00000027517) #20	six3a (ENSOMYG00000027541) #22	six2a (ENSOMYG00000027552) #23	SRBD1 (ENSOMYG00000027639) #24	PRKCE (ENSOMYG00000027840) #25	EPAS1 (ENSOMYG00000028097) #26	ENSOMYG00000028206	ENSOMYG00000028245	lhcgr (ENSOMYG00000028304)	MERTK (ENSOMYG00000028465)	ENSOMYG00000028641	ENSOMYG00000028653	ENSOMYG00000069923	ZC3H6 (ENSOMYG00000028668)	itga9 (ENSOMYG00000028775)	ENSOMYG00000029080	ENSOMYG00000029262
Salmoninae	ANCESTRAL SPECIES	1507																ENSGT00940000160346.B.h #22	ENSGT00940000158292.a.d #23
Salmoninae_a	ANCESTRAL SPECIES	109	ENSGT00940000157628.f	ENSGT00390000013215.r	ENSGT00940000158236.b	ENSGT00940000155393.d.sb.b.a	ENSGT00940000157374.n	ENSGT00940000159629.f	ENSGT00940000160850.e	ENSGT00940000158448.l	ENSGT00530000063484.a.q	ENSGT00530000064150.b	ENSGT00940000162691	ENSGT00390000015553.a.a.b.d	ENSGT00940000155092.b.j	ENSGT00940000155103.a.a.f	ENSGT00390000010498	ENSGT00940000160346.B.h #22	ENSGT00940000158292.a.d #23	ENSGT00940000154711.a.a.f.b.b.a.b #25	ENSGT00940000155930.i.b #26	ENSGT00940000155896.k.b	ENSGT00940000153956.a.b.d	ENSGT00940000155669.mc.b	ENSGT00940000156844.b.h	ENSGT00830000128368.b.f	ENSGT00940000156503.v.b	ENSGT00730000111139.n	ENSGT00940000161424.k.b	ENSGT00530000063425.a.a.a.b.i.a.b	ENSGT00940000159118.h	ENSGT00390000006820.d	ENSGT00940000158817.f
Oncorhynchus	ANCESTRAL SPECIES	17	ENSGT00390000012040.n	ENSGT00940000157628.f	ENSGT00390000013215.r	ENSGT00940000158236.b	ENSGT00940000155393.d.sb.b.a	ENSGT00940000157374.n	ENSGT00940000159629.f	ENSGT00940000160850.e	ENSGT00940000158448.l	ENSGT00530000063484.a.q	ENSGT00940000162691	ENSGT00390000015553.a.a.b.d	ENSGT00940000155092.b.j	ENSGT00940000155103.a.a.f	ENSGT00390000010498	ENSGT00940000160346.B.h #22	ENSGT00940000158292.a.d #23	ENSGT00940000154711.a.a.f.b.b.a.b #25	ENSGT00940000155930.i.b #26	ENSGT00940000155896.k.b	ENSGT00940000153956.a.b.d	ENSGT00940000155669.mc.b	ENSGT00940000156844.b.h	ENSGT00830000128368.b.f	ENSGT00940000156503.v.a.a	ENSGT00730000111139.n	ENSGT00940000161424.k.b	ENSGT00530000063425.a.a.a.b.i.a.b	ENSGT00940000159118.h	ENSGT00390000006820.d	ENSGT00940000158817.f
Rainbow trout	MODERN SPECIES	15	ENSOMYG00000070057	ENSOMYG00000068372	OLIG3 (ENSOMYG00000034015)	ENSOMYG00000034033	PERP (ENSOMYG00000034042)	CATSPERE (ENSOMYG00000034056)	ENSOMYG00000034167	ZBTB18 (ENSOMYG00000061402)	ENSOMYG00000075446	ENSOMYG00000076456	ENSOMYG00000034328	ENSOMYG00000034347	ENSOMYG00000076673	ENSOMYG00000075334	ENSOMYG00000066182	SIX3 (ENSOMYG00000034429) #22	SIX2 (ENSOMYG00000034438) #23	ENSOMYG00000075494	ENSOMYG00000070625	PRKCE (ENSOMYG00000053679) #25	ENSOMYG00000067751	EPAS1 (ENSOMYG00000034554) #26	ENSOMYG00000034600	ENSOMYG00000034628	ENSOMYG00000034581	itga9 (ENSOMYG00000034658)	ENSOMYG00000034694	ENSOMYG00000034742	ENSOMYG00000057037	ENSOMYG00000034921	ENSOMYG00000037077
Oncorhynchus_a	ANCESTRAL SPECIES	13	ENSGT00390000012040.n	ENSGT00940000157628.f	ENSGT00390000013215.r	ENSGT00940000158236.b	ENSGT00940000155393.d.sb.b.a	ENSGT00940000157374.n	ENSGT00940000159629.f	ENSGT00940000160850.e	ENSGT00940000158448.l	ENSGT00530000063484.a.q	ENSGT00940000162691	ENSGT00390000015553.a.a.b.d	ENSGT00940000155092.b.j	ENSGT00940000155103.a.a.f.c	ENSGT00390000010498	ENSGT00940000160346.B.h #22	ENSGT00940000158292.a.d #23	ENSGT00940000154711.a.a.f.b.b.a.b #25	ENSGT00940000155930.i.b #26	ENSGT00940000155896.k.b	ENSGT00940000153956.a.b.d	ENSGT00940000155669.mc.b	ENSGT00940000156844.b.g.b.b	ENSGT00830000128368.b.f	ENSGT00940000156503.v.a.a	ENSGT00730000111139.n	ENSGT00940000161424.k.b	ENSGT00530000063425.a.a.a.b.i.a.b	ENSGT00940000159118.h	ENSGT00390000006820.d	ENSGT00940000158817.f
Chinook salmon	MODERN SPECIES		phf10 (ENSOTSG00005025980)	psmb1 (ENSOTSG00005025990)	tbp (ENSOTSG00005025991)	pdcd2 (ENSOTSG00005025992)	rhoua (ENSOTSG00005025993)	rab4a (ENSOTSG00005025996)	acta1b (ENSOTSG00005025999)	ABCB10 (ENSOTSG00005026002)	urb2 (ENSOTSG00005026004)	galnt2 (ENSOTSG00005026006)	ENSOTSG00005026831	CORO2A (ENSOTSG00005026832)	tec (ENSOTSG00005026834)	ENSOTSG00005026838	dync2li1 (ENSOTSG00005026848)	six3a (ENSOTSG00005026860) #22	six2a (ENSOTSG00005026862) #23	ENSOTSG00005026863 #25	ENSOTSG00005026866 #25	epas1b (ENSOTSG00005026875) #26	ENSOTSG00005029069	ENSOTSG00005029070	ENSOTSG00005029072	pcgf5a (ENSOTSG00005029077)	ENSOTSG00005029087	ENSOTSG00005029089	ENSOTSG00005029093	ENSOTSG00005029102	GOLGA4 (ENSOTSG00005029110)	PSME4 (ENSOTSG00005029152)	GPR75 (ENSOTSG00005035805)
Coho salmon	MODERN SPECIES	2	cog2 (ENSOKIG00005047925)	ENSOKIG00005047894	oprm1 (ENSOKIG00005047869)	rgs17 (ENSOKIG00005047848)	PCNX2 (ENSOKIG00005047819)	ENSOKIG00005047696	OLIG3 (ENSOKIG00005047683)	TNFAIP3 (ENSOKIG00005047678)	PERP (ENSOKIG00005047670)	CATSPERE (ENSOKIG00005047643)	adss2 (ENSOKIG00005047413)	zbtb18 (ENSOKIG00005047392)	ENSOKIG00005047389	ENSOKIG00005047379	dync2li1 (ENSOKIG00005047370)	SIX3 (ENSOKIG00005047364) #22	SIX2 (ENSOKIG00005047351) #23	PRKCE (ENSOKIG00005047241) #25	EPAS1 (ENSOKIG00005046926) #26	ENSOKIG00005046875	ANKRD1 (ENSOKIG00005046870)	ENSOKIG00005046857	ENSOKIG00005046850	ENSOKIG00005046845	ENSOKIG00005046838	itga9 (ENSOKIG00005046299)	GOLGA4 (ENSOKIG00005046116)	KCNK12 (ENSOKIG00005046107)	ENSOKIG00005045208	ENSOKIG00005045119	PPP1R21 (ENSOKIG00005044830)
Salmo	ANCESTRAL SPECIES	31	ENSGT00390000013215.r	ENSGT00940000158236.b	ENSGT00940000155393.d.sb.b.a	ENSGT00940000157374.n	ENSGT00940000159629.f	ENSGT00940000160850.e	ENSGT00940000158448.l	ENSGT00530000063484.a.q	ENSGT00530000064150.b	ENSGT00940000162691	ENSGT00390000015553.a.a.b.d	ENSGT00940000155092.b.j	ENSGT00940000155103.a.a.f	ENSGT00390000010498	ENSGT01060000253574	ENSGT00940000160346.B.h #22	ENSGT00940000158292.a.d #23	ENSGT00940000154711.a.a.f.a #25	ENSGT00940000155930.i.b #26	ENSGT00940000155896.k.b	ENSGT00940000153956.a.b.d	ENSGT00940000156844.b.g.b.a	ENSGT00830000128368.b.f	ENSGT00940000156503.v.b	ENSGT00730000111139.n	ENSGT00940000161424.k.b	ENSGT00530000063425.a.a.a.b.i.a.b	ENSGT00940000159118.h	ENSGT00390000006820.d	ENSGT00940000158817.f	ENSGT00940000163055
River trout	MODERN SPECIES	9	ENSSTUG00000037615	ENSSTUG00000037395	olig3 (ENSSTUG00000037384)	TNFAIP3 (ENSSTUG00000037365)	perp (ENSSTUG00000037356)	ARFGEF3 (ENSSTUG00000035507)	CATSPERE (ENSSTUG00000035398)	adss2 (ENSSTUG00000034902)	zbtb18 (ENSSTUG00000034886)	ENSSTUG00000034883	ENSSTUG00000034860	dync2li1 (ENSSTUG00000034834)	ENSSTUG00000034826	ppm1ba (ENSSTUG00000034812) #17	ENSSTUG00000034804	six3a (ENSSTUG00000034801) #22	six2a (ENSSTUG00000034788) #23	ENSSTUG00000034778	PRKCE (ENSSTUG00000034364) #25	epas1b (ENSSTUG00000034798) #26	pcgf5a (ENSSTUG00000034751)	ANKRD1 (ENSSTUG00000034734)	ENSSTUG00000034684	ENSSTUG00000034666	itga9 (ENSSTUG00000034021)	GOLGA4 (ENSSTUG00000033860)	KCNK12 (ENSSTUG00000033822)	ENSSTUG00000033616	FOXN2 (ENSSTUG00000033587)	ppp1r21 (ENSSTUG00000031776)	STON1 (ENSSTUG00000031687)
Atlantic salmon	MODERN SPECIES		PERP (ENSSSAG00000083917)	ARFGEF3 (ENSSSAG00000001219)	desi2 (ENSSSAG00000108208)	cssa01h1orf101 (ENSSSAG00000001256)	ADSS2 (ENSSSAG00000073688)	zbtb18 (ENSSSAG00000092530)	ENSSSAG00000084173	ENSSSAG00000087648	ENSSSAG00000001566	dync2li1 (ENSSSAG00000001573)	ENSSSAG00000100658	ppm1b (ENSSSAG00000001582) #17	ENSSSAG00000077037	ENSSSAG00000041239	ENSSSAG00000084864	SIX3 (ENSSSAG00000114578) #22	SIX2 (ENSSSAG00000119938) #23	ENSSSAG00000104933	ENSSSAG00000085194	PRKCE (ENSSSAG00000093754) #25	EPAS1 (ENSSSAG00000109681) #26	ENSSSAG00000112443	ENSSSAG00000002810	ENSSSAG00000002924	ENSSSAG00000101996	ENSSSAG00000094286	ENSSSAG00000002972	ENSSSAG00000103405	itga9 (ENSSSAG00000003063)	ENSSSAG00000003555	ENSSSAG00000118030
Huchen	MODERN SPECIES	2157															ENSHHUG00000011466	six3a (ENSHHUG00000011453) #22	six2a (ENSHHUG00000011439) #23
Northern pike	MODERN SPECIES	4	ENSELUG00000013545	adss2 (ENSELUG00000013493)	zbtb18 (ENSELUG00000013471)	akt3a (ENSELUG00000000498)	sdccag8 (ENSELUG00000013397)	ENSELUG00000013292	dync2li1 (ENSELUG00000013196)	abcg5 (ENSELUG00000013020) #12	abcg8 (ENSELUG00000012850) #13	LRPPRC (ENSELUG00000012803) #14	ppm1ba (ENSELUG00000012758) #17	SLC3A1 (ENSELUG00000012737) #18	prepl (ENSELUG00000012723) #19	CAMKMT (ENSELUG00000012689) #20	ENSELUG00000025773	six3a (ENSELUG00000012653) #22	six2a (ENSELUG00000012613) #23	SRBD1 (ENSELUG00000012592) #24	PRKCE (ENSELUG00000012528) #25	epas1b (ENSELUG00000012507) #26	pcgf5a (ENSELUG00000012471)	ANKRD1 (ENSELUG00000012447)	ENSELUG00000012425	MERTK (ENSELUG00000012415)	TMEM87B (ENSELUG00000000459)	ENSELUG00000012290	ZC3H6 (ENSELUG00000012256)	itga9 (ENSELUG00000026895)	ENSELUG00000030092	GOLGA4 (ENSELUG00000012185)	KCNK12 (ENSELUG00000012112)
Acanthomorphata	ANCESTRAL SPECIES	257						ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24
Euacanthomorphacea	ANCESTRAL SPECIES	6	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24
Pinecone sodierfish	MODERN SPECIES	6	rtkn2 (ENSMMDG00005013517)	ENSMMDG00005013511	ENSMMDG00005013506	ENSMMDG00005013494	hint1 (ENSMMDG00005013490)	lyrm7 (ENSMMDG00005013487)	dync2li1 (ENSMMDG00005013482)	abcg5 (ENSMMDG00005013426) #12	abcg8 (ENSMMDG00005013419) #13	LRPPRC (ENSMMDG00005008898) #14	znhit2 (ENSMMDG00005008808)	ppm1ba (ENSMMDG00005008805) #17	SLC3A1 (ENSMMDG00005008796) #18	prepl (ENSMMDG00005008758) #19	CAMKMT (ENSMMDG00005008750) #20	six3a (ENSMMDG00005008748) #22	six2a (ENSMMDG00005008747) #23	SRBD1 (ENSMMDG00005007351) #24	slc17a5 (ENSMMDG00005006581)	EEF1A1 (ENSMMDG00005006490)	CGAS (ENSMMDG00005006487)	ddx43 (ENSMMDG00005006480)	KCNQ5 (ENSMMDG00005005265)	cnrip1b (ENSMMDG00005005245)	pno1 (ENSMMDG00005005242)	dnaaf10 (ENSMMDG00005005183)	c1d (ENSMMDG00005005173)	ENSMMDG00005005164	meis1b (ENSMMDG00005005050)	SPRED2 (ENSMMDG00005005012)	ACTR2 (ENSMMDG00005004705)
Percomorphaceae	ANCESTRAL SPECIES	5	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00390000007844.a
Tiger tail seahorse	MODERN SPECIES	512	ENSHCOG00000002282	ENSHCOG00000002265	rtkn2 (ENSHCOG00000002234)	ENSHCOG00000002169	HINT1 (ENSHCOG00000002161)	lyrm7 (ENSHCOG00000002155)	dync2li1 (ENSHCOG00000002149)	abcg5 (ENSHCOG00000002138) #12	abcg8 (ENSHCOG00000002122) #13	LRPPRC (ENSHCOG00000002107) #14	znhit2 (ENSHCOG00000002085)	ppm1ba (ENSHCOG00000002082) #17	SLC3A1 (ENSHCOG00000002067) #18	prepl (ENSHCOG00000021045) #19	CAMKMT (ENSHCOG00000020953) #20	six3a (ENSHCOG00000020926) #22	six2a (ENSHCOG00000020914) #23	ENSHCOG00000020901 #24	SRBD1 (ENSHCOG00000020894) #24	ENSHCOG00000020885	ENSHCOG00000020875	trmt2b (ENSHCOG00000020832)	dnajb12a (ENSHCOG00000020755)	DDIT4 (ENSHCOG00000020730)	MCM8 (ENSHCOG00000020721)	crls1 (ENSHCOG00000020688)	ENSHCOG00000020675	ENSHCOG00000020609	cdc5l (ENSHCOG00000020596)	ENSHCOG00000020559	ENSHCOG00000020532
Percomorphaceae_B	ANCESTRAL SPECIES	4	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Percomorphaceae_C	ANCESTRAL SPECIES	18	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Eupercaria	ANCESTRAL SPECIES	15	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Ballan wrasse	MODERN SPECIES	413																six3a (ENSLBEG00000027504) #22	six2a (ENSLBEG00000027510) #23	SRBD1 (ENSLBEG00000027518) #24	ENSLBEG00000027548	ENSLBEG00000027570	ENSLBEG00000027582	CFAP36 (ENSLBEG00000027625)	ppp4r3b (ENSLBEG00000027660)	PNPT1 (ENSLBEG00000027692)	ENSLBEG00000027731	CCDC88A (ENSLBEG00000027741)	ENSLBEG00000027796	ENSLBEG00000027861
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Perciformes	ANCESTRAL SPECIES	17	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Perciformes_a	ANCESTRAL SPECIES	16	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Channel bull blenny	MODERN SPECIES	6	rtkn2 (ENSCGOG00000022343)	ENSCGOG00000022346	ENSCGOG00000022349	hint1 (ENSCGOG00000022350)	lyrm7 (ENSCGOG00000022351)	dync2li1 (ENSCGOG00000022355)	abcg5 (ENSCGOG00000022378) #12	abcg8 (ENSCGOG00000022386) #13	LRPPRC (ENSCGOG00000022401) #14	znhit2 (ENSCGOG00000022523)	ppm1ba (ENSCGOG00000022526) #17	SLC3A1 (ENSCGOG00000022582) #18	prepl (ENSCGOG00000022660) #19	ENSCGOG00000022665	ENSCGOG00000022668 #20	six3a (ENSCGOG00000022669) #22	six2a (ENSCGOG00000022670) #23	SRBD1 (ENSCGOG00000022671) #24	ENSCGOG00000022674	ENSCGOG00000022676	ENSCGOG00000022678	CFAP36 (ENSCGOG00000022680)	ppp4r3b (ENSCGOG00000022687)	PNPT1 (ENSCGOG00000023026)	CCDC88A (ENSCGOG00000023156)	ENSCGOG00000023350	ENSCGOG00000024014	SYNPO2L (ENSCGOG00000024018)	ENSCGOG00000024020	hhat (ENSCGOG00000024022)	kcnh1a (ENSCGOG00000024026)
Pike perch	MODERN SPECIES	30															CAMKMT (ENSSLUG00000013635) #20	six3a (ENSSLUG00000013632) #22	six2a (ENSSLUG00000013627) #23	SRBD1 (ENSSLUG00000012478) #24	ENSSLUG00000012401	ENSSLUG00000012397	ENSSLUG00000012375	ENSSLUG00000012364	CFAP36 (ENSSLUG00000012351)	ppp4r3b (ENSSLUG00000012302)	PNPT1 (ENSSLUG00000011705)	CCDC88A (ENSSLUG00000011599)	ENSSLUG00000011513	ENSSLUG00000011462	SYNPO2L (ENSSLUG00000011442)	ENSSLUG00000011432	hhat (ENSSLUG00000011419)
Cottioidei	ANCESTRAL SPECIES	17	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Lumpfish	MODERN SPECIES	6	ENSCLMG00005004462	rtkn2 (ENSCLMG00005004420)	ENSCLMG00005004401	ENSCLMG00005004356	HINT1 (ENSCLMG00005004337)	lyrm7 (ENSCLMG00005022520)	dync2li1 (ENSCLMG00005022519)	abcg5 (ENSCLMG00005022518) #12	abcg8 (ENSCLMG00005022517) #13	LRPPRC (ENSCLMG00005022471) #14	znhit2 (ENSCLMG00005022455)	ppm1ba (ENSCLMG00005022454) #17	SLC3A1 (ENSCLMG00005022446) #18	prepl (ENSCLMG00005022445) #19	CAMKMT (ENSCLMG00005022443) #20	six3a (ENSCLMG00005022441) #22	six2a (ENSCLMG00005022440) #23	SRBD1 (ENSCLMG00005022433) #24	ENSCLMG00005022423	ENSCLMG00005022421	ENSCLMG00005022420	ENSCLMG00005022418	cfap36 (ENSCLMG00005022417)	ppp4r3b (ENSCLMG00005022414)	PNPT1 (ENSCLMG00005022352)	CCDC88A (ENSCLMG00005022317)	ENSCLMG00005021447	ENSCLMG00005021413	SYNPO2L (ENSCLMG00005021403)	ENSCLMG00005021400	hhat (ENSCLMG00005021397)
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00530000063484.a	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00530000063484.a	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
European seabass	MODERN SPECIES	1	ENSDLAG00005030588	ENSDLAG00005030371	ENSDLAG00005022858	ENSDLAG00005022867	ENSDLAG00005022871	ENSDLAG00005022884	ENSDLAG00005032923	ENSDLAG00005022898	ABCG8 (ENSDLAG00005022947) #13	abcg5 (ENSDLAG00005022915) #12	LRPPRC (ENSDLAG00005022995) #14	ppm1ba (ENSDLAG00005030148) #17	prepl (ENSDLAG00005023413) #19	SLC3A1 (ENSDLAG00005023353) #18	CAMKMT (ENSDLAG00005023424) #20	six3a (ENSDLAG00005030724) #22	six2a (ENSDLAG00005032990) #23	SRBD1 (ENSDLAG00005004122) #24	ENSDLAG00005005501	ENSDLAG00005005509	ENSDLAG00005027552	ENSDLAG00005005517	CFAP36 (ENSDLAG00005005551)	ENSDLAG00005005614	PNPT1 (ENSDLAG00005005895)	ENSDLAG00005007268	ENSDLAG00005031455	ENSDLAG00005008089	ENSDLAG00005008186	ENSDLAG00005008177	ENSDLAG00005008196
Large yellow croaker	MODERN SPECIES	2	TMEM26 (ENSLCRG00005005528)	ENSLCRG00005005529	rtkn2 (ENSLCRG00005005533)	ENSLCRG00005005536	hint1 (ENSLCRG00005005555)	lyrm7 (ENSLCRG00005005556)	dync2li1 (ENSLCRG00005005563)	abcg5 (ENSLCRG00005005589) #12	abcg8 (ENSLCRG00005006104) #13	LRPPRC (ENSLCRG00005006341) #14	znhit2 (ENSLCRG00005007896)	ppm1ba (ENSLCRG00005007898) #17	SLC3A1 (ENSLCRG00005007904) #18	prepl (ENSLCRG00005007931) #19	CAMKMT (ENSLCRG00005007932) #20	six3a (ENSLCRG00005007934) #22	SRBD1 (ENSLCRG00005007939) #24	ENSLCRG00005008095	ENSLCRG00005008099	ENSLCRG00005008102	CFAP36 (ENSLCRG00005008106)	ppp4r3b (ENSLCRG00005008117)	PNPT1 (ENSLCRG00005008174)	ENSLCRG00005008464	ENSLCRG00005008524	ENSLCRG00005008842	SYNPO2L (ENSLCRG00005008846)	ENSLCRG00005008847	hhat (ENSLCRG00005008848)	KCNH1 (ENSLCRG00005008850)	mrpl57 (ENSLCRG00005009347)
Gilthead seabream	MODERN SPECIES	6	rtkn2 (ENSSAUG00010024643)	ENSSAUG00010024638	ENSSAUG00010024633	ENSSAUG00010024630	hint1 (ENSSAUG00010024627)	lyrm7 (ENSSAUG00010024625)	dync2li1 (ENSSAUG00010024620)	abcg5 (ENSSAUG00010024441) #12	abcg8 (ENSSAUG00010024424) #13	LRPPRC (ENSSAUG00010023027) #14	znhit2 (ENSSAUG00010022984)	ppm1ba (ENSSAUG00010022947) #17	SLC3A1 (ENSSAUG00010022945) #18	prepl (ENSSAUG00010022942) #19	CAMKMT (ENSSAUG00010022940) #20	six3a (ENSSAUG00010022939) #22	six2a (ENSSAUG00010022938) #23	SRBD1 (ENSSAUG00010022924) #24	iclp (ENSSAUG00010022914)	ENSSAUG00010022910	ENSSAUG00010022907	CFAP36 (ENSSAUG00010022899)	ppp4r3b (ENSSAUG00010022852)	PNPT1 (ENSSAUG00010022480)	CCDC88A (ENSSAUG00010022375)	ENSSAUG00010016786	ENSSAUG00010016730	SYNPO2L (ENSSAUG00010016728)	MYOZ1 (ENSSAUG00010016727)	hhat (ENSSAUG00010016724)	kcnh1a (ENSSAUG00010016707)
Tetraodontidae	ANCESTRAL SPECIES	7	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b	ENSGT00390000008171
Fugu	MODERN SPECIES	16	TMEM26 (ENSTRUG00000010790)	ENSTRUG00000010671	rtkn2 (ENSTRUG00000010402)	ENSTRUG00000032684	hint1 (ENSTRUG00000009900)	lyrm7 (ENSTRUG00000021729)	dync2li1 (ENSTRUG00000009708)	abcg5 (ENSTRUG00000009436) #12	abcg8 (ENSTRUG00000009126) #13	LRPPRC (ENSTRUG00000008409) #14	znhit2 (ENSTRUG00000021686)	ppm1ba (ENSTRUG00000008165) #17	SLC3A1 (ENSTRUG00000007859) #18	prepl (ENSTRUG00000007511) #19	CAMKMT (ENSTRUG00000007486) #20	six3a (ENSTRUG00000007423) #22	SIX2 (ENSTRUG00000032701) #23	SRBD1 (ENSTRUG00000007080) #24	ENSTRUG00000020287	ENSTRUG00000026094	ENSTRUG00000006889	cfap36 (ENSTRUG00000006652)	ENSTRUG00000006119	PNPT1 (ENSTRUG00000005495)	CCDC88A (ENSTRUG00000004190)	CAMK2G (ENSTRUG00000003332)	SYNPO2L (ENSTRUG00000024738)	MYOZ1 (ENSTRUG00000002720)	hhat (ENSTRUG00000002100)	kcnh1a (ENSTRUG00000001725)	mrpl57 (ENSTRUG00000001715)
Tetraodon	MODERN SPECIES	9	TNFAIP3 (ENSTNIG00000007481)	perp (ENSTNIG00000007480)	ENSTNIG00000007479	ENSTNIG00000007478	rtkn2 (ENSTNIG00000007477)	ENSTNIG00000007476	HINT1 (ENSTNIG00000007475)	lyrm7 (ENSTNIG00000007474)	dync2li1 (ENSTNIG00000007473)	abcg5 (ENSTNIG00000007472) #12	abcg8 (ENSTNIG00000007471) #13	lrpprc (ENSTNIG00000007470)	ppm1ba (ENSTNIG00000007469) #17	SLC3A1 (ENSTNIG00000007468) #18	prepl (ENSTNIG00000007467) #19	six3a (ENSTNIG00000007466) #22	six2a (ENSTNIG00000007465) #23	SRBD1 (ENSTNIG00000007464) #24	ENSTNIG00000007463	ENSTNIG00000007462	cfap36 (ENSTNIG00000000410)	ppp4r3b (ENSTNIG00000007461)	PNPT1 (ENSTNIG00000007460)	CCDC88A (ENSTNIG00000007459)	CAMK2G (ENSTNIG00000007458)	SYNPO2L (ENSTNIG00000007457)	MYOZ1 (ENSTNIG00000007456)	hhat (ENSTNIG00000007455)	kcnh1a (ENSTNIG00000007454)	cyp3c4 (ENSTNIG00000007453)	desi2 (ENSTNIG00000007452)
Percomorphaceae_D	ANCESTRAL SPECIES	19	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Carangaria	ANCESTRAL SPECIES	19	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Pleuronectoidei	ANCESTRAL SPECIES	25	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140
Tongue sole	MODERN SPECIES	3	ENSCSEG00000003981	ENSCSEG00000003978	ENSCSEG00000003976	rtkn2 (ENSCSEG00000003956)	ENSCSEG00000003946	ENSCSEG00000003932	hint1 (ENSCSEG00000003930)	lyrm7 (ENSCSEG00000003923)	dync2li1 (ENSCSEG00000003902)	abcg5 (ENSCSEG00000003890) #12	abcg8 (ENSCSEG00000003883) #13	LRPPRC (ENSCSEG00000003850) #14	SLC3A1 (ENSCSEG00000003809) #18	prepl (ENSCSEG00000003789) #19	CAMKMT (ENSCSEG00000003780) #20	six3a (ENSCSEG00000003775) #22	six2a (ENSCSEG00000003772) #23	meis1b (ENSCSEG00000003763)	SPRED2 (ENSCSEG00000003762)	actr2a (ENSCSEG00000003753)	ENSCSEG00000003748	ENSCSEG00000003745	LGALSL (ENSCSEG00000003741)	ENSCSEG00000003714	peli1b (ENSCSEG00000003702)	ENSCSEG00000003697	ecd (ENSCSEG00000003688)	ENSCSEG00000003678	fam149b1 (ENSCSEG00000003657)	ENSCSEG00000003652	ENSCSEG00000003647
Turbot	MODERN SPECIES	6	ENSSMAG00000016882	ENSSMAG00000016872	ENSSMAG00000023134	ENSSMAG00000031666	ENSSMAG00000036983	DYNC2LI1 (ENSSMAG00000022473)	abcg5 (ENSSMAG00000034963) #12	abcg8 (ENSSMAG00000036206) #13	LRPPRC (ENSSMAG00000016811) #14	ENSSMAG00000016845	ppm1ba (ENSSMAG00000016900) #17	ppm1ba (ENSSMAG00000016848) #17	SLC3A1 (ENSSMAG00000016909) #18	CAMKMT (ENSSMAG00000016927) #20	prepl (ENSSMAG00000016916) #19	six3a (ENSSMAG00000018205) #22	six2a (ENSSMAG00000018244) #23	SRBD1 (ENSSMAG00000018256) #24	ENSSMAG00000018264	ENSSMAG00000030314	ENSSMAG00000033077	ENSSMAG00000017601	ENSSMAG00000018529	PNPT1 (ENSSMAG00000018471)	ENSSMAG00000018394	CFAP36 (ENSSMAG00000018357)	ENSSMAG00000018277	ENSSMAG00000025127	ENSSMAG00000017041	zgc:112001 (ENSSMAG00000036184)	ENSSMAG00000036238
Carangaria_A	ANCESTRAL SPECIES	25	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Barramundi perch	MODERN SPECIES	302													ENSLCAG00010021480 #18	prepl (ENSLCAG00010021482) #19	ENSLCAG00010021487 #20	six3a (ENSLCAG00010021489) #22	six2a (ENSLCAG00010021492) #23	SRBD1 (ENSLCAG00010021524) #24	ENSLCAG00010021646	ENSLCAG00010021650	PLD5 (ENSLCAG00010021661)	cfap36 (ENSLCAG00010021682)	ppp4r3b (ENSLCAG00010021687)	PNPT1 (ENSLCAG00010021727)	CCDC88A (ENSLCAG00010021798)	ENSLCAG00010021866	ENSLCAG00010022053	SYNPO2L (ENSLCAG00010022059)	ENSLCAG00010022063	hhat (ENSLCAG00010022069)
Seriola	ANCESTRAL SPECIES	17	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Yellowtail amberjack	MODERN SPECIES	3235	ENSSLDG00000022745	ENSSLDG00000022755	rtkn2 (ENSSLDG00000022772)	ENSSLDG00000022816	HINT1 (ENSSLDG00000022907)	lyrm7 (ENSSLDG00000022910)	dync2li1 (ENSSLDG00000022921)	abcg5 (ENSSLDG00000022948) #12	abcg8 (ENSSLDG00000022986) #13	LRPPRC (ENSSLDG00000023028) #14	znhit2 (ENSSLDG00000023110)	ppm1ba (ENSSLDG00000023117) #17	SLC3A1 (ENSSLDG00000023128) #18	prepl (ENSSLDG00000023138) #19	CAMKMT (ENSSLDG00000023158) #20	six3a (ENSSLDG00000023168) #22	six2a (ENSSLDG00000023173) #23	SRBD1 (ENSSLDG00000023189) #24	ENSSLDG00000023232	ENSSLDG00000023249	PLD5 (ENSSLDG00000023256)	ENSSLDG00000023279	cfap36 (ENSSLDG00000023299)	ppp4r3b (ENSSLDG00000023333)	PNPT1 (ENSSLDG00000023385)	CCDC88A (ENSSLDG00000023493)	ENSSLDG00000023769	ENSSLDG00000023918	SYNPO2L (ENSSLDG00000023921)	MYOZ1 (ENSSLDG00000023930)	hhat (ENSSLDG00000023935)
Greater amberjack	MODERN SPECIES	72																six3a (ENSSDUG00000018335) #22	six2a (ENSSDUG00000018345) #23	SRBD1 (ENSSDUG00000018364) #24	ENSSDUG00000018396	ENSSDUG00000018413	PLD5 (ENSSDUG00000018433)	ENSSDUG00000018475	cfap36 (ENSSDUG00000018494)	ppp4r3b (ENSSDUG00000018563)	PNPT1 (ENSSDUG00000018584)	CCDC88A (ENSSDUG00000018649)	ENSSDUG00000018986	ENSSDUG00000019023	SYNPO2L (ENSSDUG00000019038)	MYOZ1 (ENSSDUG00000019127)	hhat (ENSSDUG00000019222)
Anabantaria	ANCESTRAL SPECIES	17	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Zig-zag eel	MODERN SPECIES	6	ENSMAMG00000028012	ENSMAMG00000021766	ENSMAMG00000021767	ENSMAMG00000021776	ENSMAMG00000021815	ENSMAMG00000027915	DYNC2LI1 (ENSMAMG00000021792)	abcg5 (ENSMAMG00000021821) #12	abcg8 (ENSMAMG00000021826) #13	LRPPRC (ENSMAMG00000021835) #14	ENSMAMG00000021858	ppm1ba (ENSMAMG00000021863) #17	SLC3A1 (ENSMAMG00000021909) #18	prepl (ENSMAMG00000021911) #19	CAMKMT (ENSMAMG00000021914) #20	six3a (ENSMAMG00000021918) #22	six2a (ENSMAMG00000021920) #23	SRBD1 (ENSMAMG00000021921) #24	ENSMAMG00000021924	ENSMAMG00000021936	ENSMAMG00000021941	CFAP36 (ENSMAMG00000021946)	ENSMAMG00000021949	PNPT1 (ENSMAMG00000021954)	ENSMAMG00000021965	ENSMAMG00000021979	ENSMAMG00000027241	ENSMAMG00000024687	ENSMAMG00000021986	ENSMAMG00000021988	ENSMAMG00000021993
Anabantoidei	ANCESTRAL SPECIES	17	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Climbing perch	MODERN SPECIES	6	ENSATEG00000010341	ENSATEG00000027746	ENSATEG00000010438	ENSATEG00000010407	DYNC2LI1 (ENSATEG00000010448)	abcg5 (ENSATEG00000010460) #12	abcg8 (ENSATEG00000010500) #13	LRPPRC (ENSATEG00000010555) #14	ENSATEG00000010684	ppm1ba (ENSATEG00000010692) #17	SLC3A1 (ENSATEG00000010713) #18	prepl (ENSATEG00000010728) #19	ENSATEG00000010753	ENSATEG00000010773	CAMKMT (ENSATEG00000029801) #20	six3a (ENSATEG00000010809) #22	six2a (ENSATEG00000010828) #23	SRBD1 (ENSATEG00000010844) #24	ENSATEG00000028792	ENSATEG00000010915	ENSATEG00000010958	CFAP36 (ENSATEG00000011017)	ENSATEG00000011090	PNPT1 (ENSATEG00000011164)	ENSATEG00000011266	ENSATEG00000011549	ENSATEG00000027560	ENSATEG00000011664	ENSATEG00000011677	ENSATEG00000011684	ENSATEG00000011708
Siamese fighting fish	MODERN SPECIES	6	TMEM26 (ENSBSLG00000024462)	ENSBSLG00000024473	rtkn2 (ENSBSLG00000024486)	ENSBSLG00000024522	HINT1 (ENSBSLG00000024550)	ENSBSLG00000024561	dync2li1 (ENSBSLG00000024591)	abcg5 (ENSBSLG00000024674) #12	abcg8 (ENSBSLG00000024694) #13	LRPPRC (ENSBSLG00000024832) #14	znhit2 (ENSBSLG00000025194)	ppm1ba (ENSBSLG00000025196) #17	SLC3A1 (ENSBSLG00000025198) #18	prepl (ENSBSLG00000025204) #19	CAMKMT (ENSBSLG00000025205) #20	six3a (ENSBSLG00000025208) #22	SRBD1 (ENSBSLG00000025209) #24	six2a (ENSBSLG00000025214) #23	ENSBSLG00000025216	ENSBSLG00000025217	PLD5 (ENSBSLG00000025219)	cfap36 (ENSBSLG00000025220)	ppp4r3b (ENSBSLG00000025239)	PNPT1 (ENSBSLG00000025294)	CCDC88A (ENSBSLG00000025644)	ENSBSLG00000025894	ENSBSLG00000025904	SYNPO2L (ENSBSLG00000025949)	ENSBSLG00000025982	hhat (ENSBSLG00000026006)	kcnh1a (ENSBSLG00000026028)
Ovalentaria	ANCESTRAL SPECIES	18	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Ovalentaria_B	ANCESTRAL SPECIES	7	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Cichlidae	ANCESTRAL SPECIES	13	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000016775	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	16	ENSGT00390000014794.b.l.j	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	11	ENSGT00390000014794.b.l.j	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00390000016775	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Haplochromini	ANCESTRAL SPECIES	10	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000016775	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d.c	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Burton s mouthbrooder	MODERN SPECIES	389	ENSHBUG00000013535	rtkn2 (ENSHBUG00000013530)	ENSHBUG00000013507	HINT1 (ENSHBUG00000013488)	lyrm7 (ENSHBUG00000013475)	dync2li1 (ENSHBUG00000013465)	abcg5 (ENSHBUG00000013446) #12	abcg8 (ENSHBUG00000013398) #13	LRPPRC (ENSHBUG00000000393) #14	znhit2 (ENSHBUG00000013339)	ppm1ba (ENSHBUG00000013335) #17	SLC3A1 (ENSHBUG00000013318) #18	prepl (ENSHBUG00000013306) #19	ENSHBUG00000013294 #20	ENSHBUG00000013273 #20	six3a (ENSHBUG00000000388) #22	six2a (ENSHBUG00000013222) #23	SRBD1 (ENSHBUG00000013207) #24	ENSHBUG00000013152	ENSHBUG00000013142	ENSHBUG00000013130	cfap36 (ENSHBUG00000013119)	ppp4r3b (ENSHBUG00000013061)	PNPT1 (ENSHBUG00000013041)	CCDC88A (ENSHBUG00000012875)	ENSHBUG00000012759	ENSHBUG00000012748
Haplochromini_A	ANCESTRAL SPECIES	8	ENSGT00390000014794.b.l.j	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00390000016775	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d.c	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Haplochromini_B	ANCESTRAL SPECIES	5	ENSGT00390000014794.b.l.j	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00390000016775	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d.c	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Eastern happy	MODERN SPECIES	4	ENSACLG00000023357	rtkn2 (ENSACLG00000023374)	ENSACLG00000023499	ENSACLG00000023560	HINT1 (ENSACLG00000023571)	lyrm7 (ENSACLG00000023582)	dync2li1 (ENSACLG00000023598)	abcg5 (ENSACLG00000023627) #12	abcg8 (ENSACLG00000023665) #13	lrpprc (ENSACLG00000023712)	znhit2 (ENSACLG00000023876)	ppm1ba (ENSACLG00000023884) #17	SLC3A1 (ENSACLG00000023905) #18	prepl (ENSACLG00000023919) #19	CAMKMT (ENSACLG00000023929) #20	six3a (ENSACLG00000023966) #22	six2a (ENSACLG00000023990) #23	SRBD1 (ENSACLG00000024219) #24	ENSACLG00000024231	ENSACLG00000024237	ENSACLG00000024238	cfap36 (ENSACLG00000024247)	ppp4r3b (ENSACLG00000024254)	PNPT1 (ENSACLG00000024267)	CCDC88A (ENSACLG00000024333)	ENSACLG00000024996	ENSACLG00000025204	ENSACLG00000025223	SYNPO2L (ENSACLG00000025230)	MYOZ1 (ENSACLG00000025237)	hhat (ENSACLG00000025249)
Zebra mbuna	MODERN SPECIES	1095	ENSMZEG00005027387	rtkn2 (ENSMZEG00005027386)	ENSMZEG00005027385	HINT1 (ENSMZEG00005027384)	lyrm7 (ENSMZEG00005027383)	dync2li1 (ENSMZEG00005027382)	abcg5 (ENSMZEG00005027381) #12	abcg8 (ENSMZEG00005027380) #13	lrpprc (ENSMZEG00005027379)	znhit2 (ENSMZEG00005027378)	ppm1ba (ENSMZEG00005027377) #17	SLC3A1 (ENSMZEG00005027376) #18	prepl (ENSMZEG00005027375) #19	ENSMZEG00005027374	CAMKMT (ENSMZEG00005027373) #20	six3a (ENSMZEG00005027371) #22	six2a (ENSMZEG00005027370) #23	SRBD1 (ENSMZEG00005027369) #24	ENSMZEG00005027368	ENSMZEG00005027367	ENSMZEG00005027366	cfap36 (ENSMZEG00005027365)	ppp4r3b (ENSMZEG00005027364)	PNPT1 (ENSMZEG00005027363)	CCDC88A (ENSMZEG00005027362)	ENSMZEG00005027361	ENSMZEG00005027360	ENSMZEG00005027359	SYNPO2L (ENSMZEG00005027358)	MYOZ1 (ENSMZEG00005027357)	hhat (ENSMZEG00005027356)
P. nyererei	MODERN SPECIES	319	ENSPNYG00000001320	ENSPNYG00000001283	ENSPNYG00000001237	HINT1 (ENSPNYG00000001225)	lyrm7 (ENSPNYG00000001196)	dync2li1 (ENSPNYG00000001085)	abcg5 (ENSPNYG00000001001) #12	abcg8 (ENSPNYG00000000954) #13	lrpprc (ENSPNYG00000000756)	znhit2 (ENSPNYG00000000745)	ppm1ba (ENSPNYG00000000730) #17	SLC3A1 (ENSPNYG00000000725) #18	prepl (ENSPNYG00000000692) #19	ENSPNYG00000000662 #20	CAMKMT (ENSPNYG00000000640) #20	six3a (ENSPNYG00000000609) #22	six2a (ENSPNYG00000000589) #23	SRBD1 (ENSPNYG00000000508) #24	ENSPNYG00000000484	ENSPNYG00000000472	ENSPNYG00000000447	cfap36 (ENSPNYG00000000412)	ppp4r3b (ENSPNYG00000000387)	PNPT1 (ENSPNYG00000000363)	CCDC88A (ENSPNYG00000000345)	ENSPNYG00000000344	ENSPNYG00000000340	ENSPNYG00000000336	SYNPO2L (ENSPNYG00000022209)	MYOZ1 (ENSPNYG00000022198)	hhat (ENSPNYG00000022185)
Lyretail cichlid	MODERN SPECIES	295	ENSNBRG00000013572	rtkn2 (ENSNBRG00000013547)	ENSNBRG00000013538	ENSNBRG00000013491	HINT1 (ENSNBRG00000013475)	lyrm7 (ENSNBRG00000013469)	dync2li1 (ENSNBRG00000013406)	abcg5 (ENSNBRG00000013371) #12	abcg8 (ENSNBRG00000013349) #13	lrpprc (ENSNBRG00000013202)	znhit2 (ENSNBRG00000013175)	ppm1ba (ENSNBRG00000013166) #17	SLC3A1 (ENSNBRG00000013095) #18	prepl (ENSNBRG00000013061) #19	CAMKMT (ENSNBRG00000013036) #20	six3a (ENSNBRG00000012983) #22	six2a (ENSNBRG00000012969) #23	SRBD1 (ENSNBRG00000012873) #24	ENSNBRG00000012851	ENSNBRG00000012833	ENSNBRG00000012797	cfap36 (ENSNBRG00000012768)	ppp4r3b (ENSNBRG00000012734)	PNPT1 (ENSNBRG00000012517)	CCDC88A (ENSNBRG00000012428)	ENSNBRG00000012308	ENSNBRG00000012210	SYNPO2L (ENSNBRG00000012197)	ENSNBRG00000012190	hhat (ENSNBRG00000012162)	kcnh1a (ENSNBRG00000012133)
Nile tilapia	MODERN SPECIES	4	ENSONIG00000036569	ENSONIG00000000889	rtkn2 (ENSONIG00000000891)	ENSONIG00000000895	HINT1 (ENSONIG00000000901)	lyrm7 (ENSONIG00000038754)	dync2li1 (ENSONIG00000000903)	abcg5 (ENSONIG00000000911) #12	abcg8 (ENSONIG00000000915) #13	LRPPRC (ENSONIG00000000917) #14	znhit2 (ENSONIG00000038829)	ppm1ba (ENSONIG00000000927) #17	SLC3A1 (ENSONIG00000000928) #18	prepl (ENSONIG00000000934) #19	camkmt (ENSONIG00000029895) #20	six3a (ENSONIG00000000939) #22	six2 (ENSONIG00000000941) #23	SRBD1 (ENSONIG00000000945) #24	ENSONIG00000000951	ENSONIG00000029496	ENSONIG00000000963	cfap36 (ENSONIG00000000967)	ppp4r3b (ENSONIG00000000974)	PNPT1 (ENSONIG00000000983)	CCDC88A (ENSONIG00000001005)	ENSONIG00000001018	ENSONIG00000036726	ENSONIG00000033842	SYNPO2L (ENSONIG00000042472)	MYOZ1 (ENSONIG00000001028)	hhat (ENSONIG00000001029)
Midas cichlid	MODERN SPECIES	230	ENSACIG00000009064	ENSACIG00000009094	rtkn2 (ENSACIG00000009174)	ENSACIG00000009226	HINT1 (ENSACIG00000009379)	lyrm7 (ENSACIG00000009391)	dync2li1 (ENSACIG00000009413)	abcg5 (ENSACIG00000009500) #12	abcg8 (ENSACIG00000009550) #13	lrpprc (ENSACIG00000009604)	znhit2 (ENSACIG00000009688)	ppm1ba (ENSACIG00000009710) #17	SLC3A1 (ENSACIG00000009723) #18	prepl (ENSACIG00000009758) #19	CAMKMT (ENSACIG00000009798) #20	six3a (ENSACIG00000009856) #22	six2a (ENSACIG00000009865) #23	SRBD1 (ENSACIG00000009875) #24	ENSACIG00000009959	ENSACIG00000009972	ENSACIG00000009987	cfap36 (ENSACIG00000010019)	ppp4r3b (ENSACIG00000010058)	PNPT1 (ENSACIG00000010140)	CCDC88A (ENSACIG00000010202)	ENSACIG00000010329	ENSACIG00000010806	SYNPO2L (ENSACIG00000010819)	MYOZ1 (ENSACIG00000010857)	hhat (ENSACIG00000010893)	KCNH1 (ENSACIG00000010925)
Pomacentridae	ANCESTRAL SPECIES	9	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000159769.a.a.h	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a
Bicolor damselfish	MODERN SPECIES	1969																six3a (ENSSPAG00000018113) #22	six2a (ENSSPAG00000018123) #23
Pomacentridae_A	ANCESTRAL SPECIES	7	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Spiny chromis	MODERN SPECIES	233													ENSAPOG00000004978	setd3 (ENSAPOG00000005028)	BCL11B (ENSAPOG00000005057)	six3a (ENSAPOG00000005071) #22	six2a (ENSAPOG00000005085) #23	SRBD1 (ENSAPOG00000005103) #24	ENSAPOG00000005144	ENSAPOG00000005178	ENSAPOG00000005199	CFAP36 (ENSAPOG00000005312)	ppp4r3b (ENSAPOG00000005423)	PNPT1 (ENSAPOG00000005581)	CCDC88A (ENSAPOG00000005889)	ENSAPOG00000006135	ENSAPOG00000000169
Amphiprion	ANCESTRAL SPECIES	13	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00390000016775	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Clown anemonefish	MODERN SPECIES	730																six3a (ENSAOCG00000024724) #22	six2a (ENSAOCG00000024722) #23	SRBD1 (ENSAOCG00000024718) #24	ENSAOCG00000024715	ENSAOCG00000024708	mybpc3 (ENSAOCG00000024685)	lgr4 (ENSAOCG00000024633)
Orange clownfish	MODERN SPECIES	12	TMEM26 (ENSAPEG00000003583)	ENSAPEG00000003571	rtkn2 (ENSAPEG00000003504)	ENSAPEG00000003488	ENSAPEG00000003452	HINT1 (ENSAPEG00000003438)	lyrm7 (ENSAPEG00000003427)	dync2li1 (ENSAPEG00000003385)	abcg5 (ENSAPEG00000003332) #12	abcg8 (ENSAPEG00000003259) #13	lrpprc (ENSAPEG00000002937)	ppm1ba (ENSAPEG00000002921) #17	SLC3A1 (ENSAPEG00000002909) #18	prepl (ENSAPEG00000002854) #19	ENSAPEG00000002827 #20	six3a (ENSAPEG00000002810) #22	six2a (ENSAPEG00000002790) #23	SRBD1 (ENSAPEG00000002645) #24	ENSAPEG00000002589	ENSAPEG00000002571	ENSAPEG00000002540	ENSAPEG00000002528	CFAP36 (ENSAPEG00000002451)	ppp4r3b (ENSAPEG00000002382)	PNPT1 (ENSAPEG00000002299)	CCDC88A (ENSAPEG00000002147)	ENSAPEG00000002038	ENSAPEG00000001975	ENSAPEG00000001962	SYNPO2L (ENSAPEG00000001955)	MYOZ1 (ENSAPEG00000001946)
Atherinomorphae	ANCESTRAL SPECIES	16	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Oryzias	ANCESTRAL SPECIES	6	ENSGT00940000163584.b.a.a	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Oryzias_a	ANCESTRAL SPECIES	4	ENSGT00390000014794.b.l.k	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00390000016775	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Japanese Medaka HdrR	MODERN SPECIES	6	ENSORLG00000004760	ENSORLG00000004756	rtkn2 (ENSORLG00000004745)	ENSORLG00000004725	HINT1 (ENSORLG00000004689)	lyrm7 (ENSORLG00000028115)	dync2li1 (ENSORLG00000004674)	abcg5 (ENSORLG00000004654) #12	abcg8 (ENSORLG00000004629) #13	lrpprc (ENSORLG00000004605)	znhit2 (ENSORLG00000004508)	ppm1ba (ENSORLG00000004504) #17	SLC3A1 (ENSORLG00000004483) #18	prepl (ENSORLG00000004458) #19	CAMKMT (ENSORLG00000029257) #20	six3a (ENSORLG00000030158) #22	six2a (ENSORLG00000004433) #23	SRBD1 (ENSORLG00000004427) #24	ENSORLG00000026490	ENSORLG00000028685	ENSORLG00000026596	ENSORLG00000004404	CFAP36 (ENSORLG00000004395)	PPP4R3C (ENSORLG00000004376)	PNPT1 (ENSORLG00000004335)	CCDC88A (ENSORLG00000004272)	ENSORLG00000004170	ENSORLG00000004101	ENSORLG00000004094	MYOZ1 (ENSORLG00000004086)	hhat (ENSORLG00000004072)
Chinese medaka	MODERN SPECIES	1079											znhit2 (ENSOSIG00000010631)	ppm1ba (ENSOSIG00000010633) #17	SLC3A1 (ENSOSIG00000010634) #18	prepl (ENSOSIG00000010649) #19	CAMKMT (ENSOSIG00000010650) #20	six3a (ENSOSIG00000010652) #22	six2a (ENSOSIG00000010653) #23	SRBD1 (ENSOSIG00000010662) #24	ENSOSIG00000013895	ENSOSIG00000013896	ENSOSIG00000013897	CFAP36 (ENSOSIG00000013902)	PPP4R3C (ENSOSIG00000013944)	PNPT1 (ENSOSIG00000015998)	CCDC88A (ENSOSIG00000016013)	ENSOSIG00000016034	ENSOSIG00000016618	SYNPO2L (ENSOSIG00000016619)	MYOZ1 (ENSOSIG00000016620)	hhat (ENSOSIG00000016622)	kcnh1a (ENSOSIG00000016627)
Oryzias_b	ANCESTRAL SPECIES	7	ENSGT00940000163584.b.a.a	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Javanese ricefish	MODERN SPECIES	6	rtkn2 (ENSOJAG00000015213)	ENSOJAG00000015205	ENSOJAG00000015200	ENSOJAG00000015173	HINT1 (ENSOJAG00000015150)	lyrm7 (ENSOJAG00000015144)	dync2li1 (ENSOJAG00000015129)	abcg5 (ENSOJAG00000014776) #12	abcg8 (ENSOJAG00000014621) #13	LRPPRC (ENSOJAG00000012625) #14	znhit2 (ENSOJAG00000012436)	ppm1ba (ENSOJAG00000012420) #17	SLC3A1 (ENSOJAG00000012367) #18	prepl (ENSOJAG00000012348) #19	CAMKMT (ENSOJAG00000012331) #20	six3a (ENSOJAG00000012309) #22	six2a (ENSOJAG00000012295) #23	SRBD1 (ENSOJAG00000011838) #24	ENSOJAG00000011681	CFAP36 (ENSOJAG00000011666)	ppp4r3b (ENSOJAG00000011569)	PNPT1 (ENSOJAG00000010173)	CCDC88A (ENSOJAG00000009850)	ENSOJAG00000009276	ENSOJAG00000009063	SYNPO2L (ENSOJAG00000009041)	ENSOJAG00000009019	hhat (ENSOJAG00000009008)	kcnh1a (ENSOJAG00000008872)	mrpl57 (ENSOJAG00000008833)	ENSOJAG00000008780
Indian medaka	MODERN SPECIES	27	ENSOMEG00000011480	ENSOMEG00000011504	rtkn2 (ENSOMEG00000011530)	ENSOMEG00000011596	HINT1 (ENSOMEG00000011624)	ENSOMEG00000000276	dync2li1 (ENSOMEG00000011690)	abcg5 (ENSOMEG00000011742) #12	abcg8 (ENSOMEG00000011805) #13	ENSOMEG00000011863	znhit2 (ENSOMEG00000011883)	ppm1ba (ENSOMEG00000011924) #17	SLC3A1 (ENSOMEG00000011990) #18	prepl (ENSOMEG00000012079) #19	CAMKMT (ENSOMEG00000012106) #20	six3a (ENSOMEG00000012134) #22	six2a (ENSOMEG00000012151) #23	SRBD1 (ENSOMEG00000012229) #24	ENSOMEG00000012253	ENSOMEG00000012277	CFAP36 (ENSOMEG00000012326)	PPP4R3C (ENSOMEG00000012356)	ENSOMEG00000012385	ENSOMEG00000012404	CCDC88A (ENSOMEG00000012458)	CCDC88A (ENSOMEG00000012493)	ENSOMEG00000012683	ENSOMEG00000012730	SYNPO2L (ENSOMEG00000012748)	MYOZ1 (ENSOMEG00000012766)	hhat (ENSOMEG00000012815)
Cyprinodontiformes	ANCESTRAL SPECIES	17	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Cyprinodontoidei	ANCESTRAL SPECIES	14	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Poeciliinae	ANCESTRAL SPECIES	16	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Poecilia	ANCESTRAL SPECIES	11	ENSGT00940000163584.b.a.a	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00390000000153.h
NAME_6	ANCESTRAL SPECIES	147	ENSGT00530000063484.a	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00390000000153.h
Amazon molly	MODERN SPECIES	292	TMEM26 (ENSPFOG00000012416)	ENSPFOG00000012334	rtkn2 (ENSPFOG00000012203)	ENSPFOG00000012044	hint1 (ENSPFOG00000012020)	lyrm7 (ENSPFOG00000012016)	dync2li1 (ENSPFOG00000023238)	abcg5 (ENSPFOG00000011857) #12	abcg8 (ENSPFOG00000011707) #13	lrpprc (ENSPFOG00000011227)	znhit2 (ENSPFOG00000020702)	ppm1ba (ENSPFOG00000011186) #17	SLC3A1 (ENSPFOG00000011069) #18	prepl (ENSPFOG00000010951) #19	CAMKMT (ENSPFOG00000010929) #20	six3a (ENSPFOG00000010920) #22	six2a (ENSPFOG00000010912) #23	SRBD1 (ENSPFOG00000010650) #24	ENSPFOG00000010614	ENSPFOG00000010591	ENSPFOG00000010505	cfap36 (ENSPFOG00000010432)	ppp4r3b (ENSPFOG00000023794)	PNPT1 (ENSPFOG00000010229)	CCDC88A (ENSPFOG00000009569)	CAMK2G (ENSPFOG00000009317)	ENSPFOG00000009266	ENSPFOG00000009250	SYNPO2L (ENSPFOG00000009227)	MYOZ1 (ENSPFOG00000009200)	hhat (ENSPFOG00000009114)
Sailfin molly	MODERN SPECIES	33		ENSPLAG00000003723	rtkn2 (ENSPLAG00000003768)	ENSPLAG00000003788	hint1 (ENSPLAG00000003800)	lyrm7 (ENSPLAG00000003807)	dync2li1 (ENSPLAG00000003838)	abcg5 (ENSPLAG00000003921) #12	abcg8 (ENSPLAG00000003989) #13	LRPPRC (ENSPLAG00000004018) #14	znhit2 (ENSPLAG00000004023)	ppm1ba (ENSPLAG00000004052) #17	SLC3A1 (ENSPLAG00000004072) #18	prepl (ENSPLAG00000004080) #19	CAMKMT (ENSPLAG00000004130) #20	six3a (ENSPLAG00000004149) #22	six2a (ENSPLAG00000004158) #23
Guppy	MODERN SPECIES	445	ENSPREG00000003913	ENSPREG00000003880	hint1 (ENSPREG00000003867)	lyrm7 (ENSPREG00000003834)	dync2li1 (ENSPREG00000003801)	abcg5 (ENSPREG00000003753) #12	abcg8 (ENSPREG00000003712) #13	LRPPRC (ENSPREG00000003662) #14	znhit2 (ENSPREG00000003644)	ENSPREG00000003631	ppm1ba (ENSPREG00000003609) #17	SLC3A1 (ENSPREG00000003541) #18	prepl (ENSPREG00000003512) #19	ENSPREG00000003489	CAMKMT (ENSPREG00000003451) #20	six3a (ENSPREG00000003423) #22	six2a (ENSPREG00000003406) #23	ENSPREG00000003378	SRBD1 (ENSPREG00000003258) #24	ENSPREG00000003223	ENSPREG00000003208	ENSPREG00000003176	cfap36 (ENSPREG00000003160)	ppp4r3b (ENSPREG00000003138)	PNPT1 (ENSPREG00000003072)	CCDC88A (ENSPREG00000002964)	CAMK2G (ENSPREG00000002915)	ENSPREG00000002897	SYNPO2L (ENSPREG00000002884)	MYOZ1 (ENSPREG00000002801)	hhat (ENSPREG00000002761)
Platyfish	MODERN SPECIES	14	TMEM26 (ENSXMAG00000029874)	ENSXMAG00000027181	rtkn2 (ENSXMAG00000018196)	ENSXMAG00000018174	hint1 (ENSXMAG00000023903)	lyrm7 (ENSXMAG00000018169)	dync2li1 (ENSXMAG00000021360)	abcg5 (ENSXMAG00000018141) #12	abcg8 (ENSXMAG00000018127) #13	lrpprc (ENSXMAG00000018108)	znhit2 (ENSXMAG00000025544)	ppm1ba (ENSXMAG00000029761) #17	SLC3A1 (ENSXMAG00000018089) #18	prepl (ENSXMAG00000018077) #19	CAMKMT (ENSXMAG00000024628) #20	six3a (ENSXMAG00000019592) #22	six2a (ENSXMAG00000025648) #23	SRBD1 (ENSXMAG00000016861) #24	ENSXMAG00000022307	ENSXMAG00000021981	ENSXMAG00000018039	cfap36 (ENSXMAG00000016873)	ppp4r3b (ENSXMAG00000016887)	PNPT1 (ENSXMAG00000016907)	CCDC88A (ENSXMAG00000016937)	CAMK2G (ENSXMAG00000026011)	ENSXMAG00000023549	SYNPO2L (ENSXMAG00000021760)	ENSXMAG00000017039	hhat (ENSXMAG00000017050)	kcnh1a (ENSXMAG00000017065)
NAME_4	ANCESTRAL SPECIES	2	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00390000017923.d	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00390000016775	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00940000178768	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24
Mummichog	MODERN SPECIES	2217	ENSFHEG00000019823	rtkn2 (ENSFHEG00000019814)	ENSFHEG00000000503	ENSFHEG00000019798	lyrm7 (ENSFHEG00000019787)	dync2li1 (ENSFHEG00000019766)	abcg5 (ENSFHEG00000019752) #12	abcg8 (ENSFHEG00000019645) #13	lrpprc (ENSFHEG00000019604)	znhit2 (ENSFHEG00000019590)	ppm1ba (ENSFHEG00000019582) #17	SLC3A1 (ENSFHEG00000019545) #18	prepl (ENSFHEG00000019535) #19	ENSFHEG00000019525	CAMKMT (ENSFHEG00000019513) #20	six3a (ENSFHEG00000019505) #22	six2a (ENSFHEG00000019493) #23	SRBD1 (ENSFHEG00000019480) #24
Sheepshead minnow	MODERN SPECIES	965																six3a (ENSCVAG00000020097) #22	six2a (ENSCVAG00000020105) #23	SRBD1 (ENSCVAG00000020212) #24
Aplocheiloidei	ANCESTRAL SPECIES	22	ENSGT00390000014794.b.l	ENSGT00940000163584.b.a.b.b	ENSGT00940000157470	ENSGT00940000155103.a.a	ENSGT00940000154451	ENSGT00390000017923	ENSGT00390000010498	ENSGT00940000157985 #12	ENSGT00940000159739 #13	ENSGT00960000186682 #14	ENSGT00390000017147	ENSGT00940000156070.a.a #17	ENSGT00940000158103 #18	ENSGT00530000063426.a #19	ENSGT00390000002168 #20	ENSGT00940000160346.B #22	ENSGT00940000158292.a #23	ENSGT00510000047850 #24	ENSGT00940000169140	ENSGT00390000007844.a	ENSGT00950000183059.b.a.b.q	ENSGT00390000012785	ENSGT00390000018199.b	ENSGT00390000014001	ENSGT00940000155559.a.a	ENSGT00940000156481.a.a.b	ENSGT00940000157656.b	ENSGT00950000183054.b.d	ENSGT00950000183027.a.b.d	ENSGT00530000063629.a	ENSGT00940000155793.a.b
Mangrove rivulus	MODERN SPECIES	3	perp (ENSKMAG00000002922)	TMEM26 (ENSKMAG00000002928)	ENSKMAG00000002943	rtkn2 (ENSKMAG00000002984)	ENSKMAG00000003108	HINT1 (ENSKMAG00000003173)	dync2li1 (ENSKMAG00000003136)	lyrm7 (ENSKMAG00000003198)	abcg5 (ENSKMAG00000003228) #12	abcg8 (ENSKMAG00000003252) #13	LRPPRC (ENSKMAG00000003287) #14	ppm1ba (ENSKMAG00000003335) #17	SLC3A1 (ENSKMAG00000003375) #18	prepl (ENSKMAG00000003394) #19	CAMKMT (ENSKMAG00000003422) #20	six3a (ENSKMAG00000003444) #22	six2a (ENSKMAG00000003457) #23	SRBD1 (ENSKMAG00000003473) #24	ENSKMAG00000003561	ENSKMAG00000003576	cfap36 (ENSKMAG00000003627)	ppp4r3b (ENSKMAG00000003648)	MYOF (ENSKMAG00000003674)	lgi1a (ENSKMAG00000003817)	MARK1 (ENSKMAG00000003869)	EFEMP1 (ENSKMAG00000003944)	ENSKMAG00000003966	XPO5 (ENSKMAG00000004007)	tp53bp2a (ENSKMAG00000004076)	SEMA4G (ENSKMAG00000004117)	lzts2a (ENSKMAG00000004143)
Turquoise killifish	MODERN SPECIES	1612	ARID5B (ENSNFUG00015001816)	RTKN2 (ENSNFUG00015001824)	ENSNFUG00015001848	HINT1 (ENSNFUG00015001856)	lyrm7 (ENSNFUG00015001863)	ENSNFUG00015001877	dync2li1 (ENSNFUG00015001890)	abcg5 (ENSNFUG00015001941) #12	abcg8 (ENSNFUG00015002002) #13	LRPPRC (ENSNFUG00015002145) #14	ZNHIT2 (ENSNFUG00015002442)	PPM1BA (ENSNFUG00015002446) #17	SLC3A1 (ENSNFUG00015002464) #18	prepl (ENSNFUG00015002529) #19	CAMKMT (ENSNFUG00015002534) #20	SIX3 (ENSNFUG00015002537) #22	six2a (ENSNFUG00015002539) #23	SRBD1 (ENSNFUG00015002640) #24	ENSNFUG00015003172	CD74B (ENSNFUG00015003177)	OLA.18521 (ENSNFUG00015003182)	ENSNFUG00015003198	CCDC104 (ENSNFUG00015003213)	CABZ01031887.1 (ENSNFUG00015003227)	PNPT1 (ENSNFUG00015003263)	CCDC88A (ENSNFUG00015003339)	CAMK2G (ENSNFUG00015003704)	ENSNFUG00015005036	SYNPO2L (ENSNFUG00015005042)	MYOZ1 (ENSNFUG00015005058)	HHAT (ENSNFUG00015005067)
Cod	MODERN SPECIES	6	ENSGMOG00000028655	ENSGMOG00000024188	ENSGMOG00000012075	ENSGMOG00000034532	ENSGMOG00000031762	ENSGMOG00000005269	DYNC2LI1 (ENSGMOG00000008330)	abcg5 (ENSGMOG00000008333) #12	abcg8 (ENSGMOG00000008335) #13	LRPPRC (ENSGMOG00000008337) #14	ENSGMOG00000026363	ppm1ba (ENSGMOG00000001984) #17	SLC3A1 (ENSGMOG00000001999) #18	prepl (ENSGMOG00000002024) #19	CAMKMT (ENSGMOG00000030333) #20	six3a (ENSGMOG00000029811) #22	six2a (ENSGMOG00000015501) #23	SRBD1 (ENSGMOG00000018010) #24	ENSGMOG00000018021	ENSGMOG00000018025	ENSGMOG00000036577	ENSGMOG00000036486	ENSGMOG00000033502	ENSGMOG00000031301	ENSGMOG00000032937	ENSGMOG00000005023	ENSGMOG00000005052	ENSGMOG00000005105	ENSGMOG00000023673	ENSGMOG00000031471	NCKAP1 (ENSGMOG00000010463)